BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014039
(432 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 126
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 245
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 303
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 119
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 238
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 119
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 238
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 118
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 237
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 126
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 245
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 303
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 120
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 239
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 297
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 123
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 242
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 300
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 119
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 238
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 120
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKPENLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 239
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 297
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 121
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKPENLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 240
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 298
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGL+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLSFC 119
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 238
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPL--IKSYLFQLLQGLAFC 118
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 237
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPL--IKSYLFQLLQGLAFC 119
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKPENLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 238
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 120
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKPENLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 239
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 297
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 118
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 237
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 179/297 (60%), Gaps = 10/297 (3%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNHP 60
E ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHMH 117
NI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFCH 119
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSS 175
+ HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-KP 238
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 122
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKPENLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 241
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 299
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 123
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 242
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 300
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 119
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 238
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+ K++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 119
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 238
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+ K++ +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 118
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + YT V T WYRAPE+LL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 237
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 120
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 239
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 297
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 119
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 238
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 119
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 238
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 296
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 122
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 241
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 299
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 121
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 240
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 298
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 180/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE+++ +L M IP I+S++ Q+LQGLA
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 122
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 241
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 299
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 121
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 240
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 298
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 122
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 241
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 299
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 120
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 239
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 297
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 118
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 237
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPL--IKSYLFQLLQGLAFC 122
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 241
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 299
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 174/290 (60%), Gaps = 9/290 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL--IKSYLFQLLQGLAFC 119
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 238
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPL--IKSYLFQLLQGLAFC 121
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 240
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 298
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 179/298 (60%), Gaps = 10/298 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLNH 59
ME ++ +E++G+GT G VYKA N T E+VA+KK++ +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ---IPFSEGEIRSFMSQMLQGLAHM 116
PNI+KL +V+ N+L+ +FE++ +L M IP I+S++ Q+LQGLA
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPL--IKSYLFQLLQGLAFC 122
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
H + HRDLKP+NLL+ T +K+ADFGLAR + Y V T WYRAPE+LL
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS A+D+W++G I AE+ T +FPGDSEIDQL+++ LG PD +P T++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY-K 241
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF-NVETWVPY 291
S+ + + S ++P + L+ Q+ +DP +R +A AL HPFF +V VP+
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 299
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 178/289 (61%), Gaps = 8/289 (2%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM---NLREVKALRKL 57
ME+Y+ LE++G+GT G VYKA + + IVA+K+++ +E + +RE+ L++L
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQG-RIVALKRIR--LDAEDEGIPSTAIREISLLKEL 76
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
+HPNI+ L +V+ L +FE+ME +L ++ E + + +I+ ++ Q+L+G+AH H
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 118 RNGYFHRDLKPENLLVTND-VLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSS 175
++ HRDLKP+NLL+ +D LK+ADFGLAR + YT V T WYRAP+VL+ S
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
YS ++D+W++G I AE+ T P+FPG ++ DQL K+ ILG P+ +P+ +
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
++ S IIP E IDL+ + +DP +R +A A+ HP+F
Sbjct: 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 178/289 (61%), Gaps = 8/289 (2%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM---NLREVKALRKL 57
ME+Y+ LE++G+GT G VYKA + + IVA+K+++ +E + +RE+ L++L
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQG-RIVALKRIR--LDAEDEGIPSTAIREISLLKEL 76
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
+HPNI+ L +V+ L +FE+ME +L ++ E + + +I+ ++ Q+L+G+AH H
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 118 RNGYFHRDLKPENLLVTND-VLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSS 175
++ HRDLKP+NLL+ +D LK+ADFGLAR + YT V T WYRAP+VL+ S
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK 196
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
YS ++D+W++G I AE+ T P+FPG ++ DQL K+ ILG P+ +P+ +
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
++ S IIP E IDL+ + +DP +R +A A+ HP+F
Sbjct: 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 171/289 (59%), Gaps = 8/289 (2%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMN---LREVKALRKL 57
+RY+ L+ LG+G VYKA + T +IVA+KK+K ++ +N LRE+K L++L
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
+HPNII L + + + +F++ME +L I+++ + + I+++M LQGL ++H
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 118 RNGYFHRDLKPENLLVT-NDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSS 175
++ HRDLKP NLL+ N VLK+ADFGLA+ S Y V TRWYRAPE+L +
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARM 189
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
Y +DMWAVG ILAEL P PGDS++DQL ++ LG P +P+ ++ ++
Sbjct: 190 YGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF 249
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+P L I A + +DLI L ++P R TA QAL+ +F+
Sbjct: 250 KSFPGIP--LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 165/287 (57%), Gaps = 5/287 (1%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK-RKFYFWEECMNLREVKALRKLNH 59
ME+Y LE++G+GT G VYKA N E A+KK++ K +RE+ L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI+KL +V+ L +FE+++ +L ++ + +SF+ Q+L G+A+ H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYS 177
HRDLKP+NLL+ + LKIADFGLAR + YT V T WYRAP+VL+ S YS
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
ID+W+VG I AE+ +P+FPG SE DQL ++ ILG P+ +P T + + ++
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY-DPNF 238
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+ P+ + IDL+ ++ DP +R TA QAL+H +F
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 165/287 (57%), Gaps = 5/287 (1%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK-RKFYFWEECMNLREVKALRKLNH 59
ME+Y LE++G+GT G VYKA N E A+KK++ K +RE+ L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI+KL +V+ L +FE+++ +L ++ + +SF+ Q+L G+A+ H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYS 177
HRDLKP+NLL+ + LKIADFGLAR + YT V T WYRAP+VL+ S YS
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
ID+W+VG I AE+ +P+FPG SE DQL ++ ILG P+ +P T + + ++
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY-DPNF 238
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+ P+ + IDL+ ++ DP +R TA QAL+H +F
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 165/287 (57%), Gaps = 5/287 (1%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK-RKFYFWEECMNLREVKALRKLNH 59
ME+Y LE++G+GT G VYKA N E A+KK++ K +RE+ L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI+KL +V+ L +FE+++ +L ++ + +SF+ Q+L G+A+ H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYS 177
HRDLKP+NLL+ + LKIADFGLAR + YT + T WYRAP+VL+ S YS
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
ID+W+VG I AE+ +P+FPG SE DQL ++ ILG P+ +P T + + ++
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY-DPNF 238
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+ P+ + IDL+ ++ DP +R TA QAL+H +F
Sbjct: 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 178/301 (59%), Gaps = 15/301 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM---NLREVKALRKL 57
++RY+ + +LG+GT G VYKA + T E VA+K+++ + EE + +REV L++L
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKEL 90
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
H NII+LK V+ N+ L IFEY E++L M ++ S I+SF+ Q++ G+ H
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAENDLKKYM-DKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 118 RNGYFHRDLKPENLLVT------NDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVL 170
HRDLKP+NLL++ VLKI DFGLAR + +T + T WYR PE+L
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209
Query: 171 LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNIS 230
L S YS ++D+W++ I AE+ +P+FPGDSEIDQL+K+ +LG PD T +P T +
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP 269
Query: 231 RLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWV 289
S+ + L ++ E +DL+ + DP++R +A AL+HP+F+ +
Sbjct: 270 DWKQ-SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFD 328
Query: 290 P 290
P
Sbjct: 329 P 329
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 165/295 (55%), Gaps = 20/295 (6%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE-------ECMNLREVKA 53
ME+Y+ + ++G+G+ G V+K N +T +IVA+KK F E + + LRE++
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKK------FLESEDDPVIKKIALREIRM 55
Query: 54 LRKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
L++L HPN++ L EV R L +FEY +H + H + Q E ++S Q LQ +
Sbjct: 56 LKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAV 115
Query: 114 AHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPP-YTEYVSTRWYRAPEVLL 171
H++ HRD+KPEN+L+T + V+K+ DFG AR L+ Y + V+TRWYR+PE+L+
Sbjct: 116 NFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLV 175
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILG---APDWTAFPEATN 228
+ Y P +D+WA+G + AEL + P++PG S++DQLY + LG F
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
S + ++ P+ L PN S A+ L+ DP R T +Q L HP+F
Sbjct: 236 FSGVKIPDPEDMEPLELK--FPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 172/292 (58%), Gaps = 13/292 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM---NLREVKALRKL 57
M++Y+ LE++G+GT G V+KA N ET+EIVA+K+++ +E + LRE+ L++L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR--LDDDDEGVPSSALREICLLKEL 58
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
H NI++L +V+ + +L +FE+ + +L ++SF+ Q+L+GL H
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 118 RNGYFHRDLKPENLLVT-NDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDLKP+NLL+ N LK+ADFGLAR + Y+ V T WYR P+VL +
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 176 YSPAIDMWAVGAILAELFTLS-PIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS +IDMW+ G I AEL + P+FPG+ DQL ++ +LG P +P T +L
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT---KLPD 235
Query: 235 ISYSEILP--INLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+ P +L +++P + DL+ L +P++R +A++ALQHP+F+
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 170/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 82
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 140
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ T LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 261 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 170/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 82
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 140
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ T LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 261 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLAFRHEN 84
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 142
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ T LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 143 HSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKA 262
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 263 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 170/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 82
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 140
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ T LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 261 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 159/286 (55%), Gaps = 4/286 (1%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
ME Y L++LG+GT VYK + T +VA+K+++ + C +REV L+ L H
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
NI+ L +++ L +FEY++ +L + + + ++ F+ Q+L+GLA+ HR
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 121 YFHRDLKPENLLVT-NDVLKIADFGLARELSSMP--PYTEYVSTRWYRAPEVLLQSSSYS 177
HRDLKP+NLL+ LK+ADFGLAR S+P Y V T WYR P++LL S+ YS
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARA-KSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
IDMW VG I E+ T P+FPG + +QL+ + ILG P +P + + +Y
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY 239
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L P + DL+ +L ++ R +A+ A++HPFF
Sbjct: 240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 163/297 (54%), Gaps = 17/297 (5%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEEC-MNLREVKALRKLNHP 60
+ Y+I+E +G+G G V A T + VA+KK+ F LRE+K L+ H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 61 NIIKLKEVVR------ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
NII +K+++R E ++ + + ME +L+ I+ Q P + +R F+ Q+L+GL
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLK 172
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPP-----YTEYVSTRWYRAPE 168
+MH HRDLKP NLLV + LKI DFG+AR L + P TEYV+TRWYRAPE
Sbjct: 173 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++L Y+ AID+W+VG I E+ +FPG + + QL + +LG P A +A
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS-PAVIQAVG 291
Query: 229 ISRLISI--SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
R+ + S P+ + P A +A+ L+ ++ ++P R +A AL+HPF
Sbjct: 292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/297 (36%), Positives = 163/297 (54%), Gaps = 17/297 (5%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEEC-MNLREVKALRKLNHP 60
+ Y+I+E +G+G G V A T + VA+KK+ F LRE+K L+ H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 61 NIIKLKEVVR------ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
NII +K+++R E ++ + + ME +L+ I+ Q P + +R F+ Q+L+GL
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLK 173
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPP-----YTEYVSTRWYRAPE 168
+MH HRDLKP NLLV + LKI DFG+AR L + P TEYV+TRWYRAPE
Sbjct: 174 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++L Y+ AID+W+VG I E+ +FPG + + QL + +LG P A +A
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS-PAVIQAVG 292
Query: 229 ISRLISI--SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
R+ + S P+ + P A +A+ L+ ++ ++P R +A AL+HPF
Sbjct: 293 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 170/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 86
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 144
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ T LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 265 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 171/292 (58%), Gaps = 13/292 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM---NLREVKALRKL 57
M++Y+ LE++G+GT G V+KA N ET+EIVA+K+++ +E + LRE+ L++L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR--LDDDDEGVPSSALREICLLKEL 58
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
H NI++L +V+ + +L +FE+ + +L ++SF+ Q+L+GL H
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 118 RNGYFHRDLKPENLLVT-NDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDLKP+NLL+ N LK+A+FGLAR + Y+ V T WYR P+VL +
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 176 YSPAIDMWAVGAILAELFTLS-PIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
YS +IDMW+ G I AEL P+FPG+ DQL ++ +LG P +P T +L
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT---KLPD 235
Query: 235 ISYSEILP--INLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+ P +L +++P + DL+ L +P++R +A++ALQHP+F+
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 169/294 (57%), Gaps = 17/294 (5%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNI 62
RY L +G+G G V A++ VA+KK+ + LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 63 IKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
I + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYIH 145
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLLQ 172
HRDLKP NLL+ T LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI--- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR 265
Query: 230 SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 266 NYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 170/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 90
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 148
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ T LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 149 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 268
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 269 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 170/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 82
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 140
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ T LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 261 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 102
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 160
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 161 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 281 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 170/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 80
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 138
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P+ N+
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKA 258
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 259 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 84
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 142
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 263 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 82
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 140
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 261 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 87
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 145
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 265
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 266 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 88
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 146
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 147 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 266
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 267 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 79
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 137
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 138 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 257
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 258 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 86
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 144
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 265 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 80
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 138
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 258
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 259 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 166/293 (56%), Gaps = 13/293 (4%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNI 62
++K LE+LG+GT VYK N T VA+K++K +RE+ +++L H NI
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI 65
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYHIMRERQIP-----FSEGEIRSFMSQMLQGLAHMH 117
++L +V+ N+L +FE+M+++L M R + ++ F Q+LQGLA H
Sbjct: 66 VRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 118 RNGYFHRDLKPENLLVTN-DVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSS 175
N HRDLKP+NLL+ LK+ DFGLAR + ++ V T WYRAP+VL+ S +
Sbjct: 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRT 185
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
YS +ID+W+ G ILAE+ T P+FPG ++ +QL + I+G P+ + +P T + + +
Sbjct: 186 YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK-YNP 244
Query: 236 SYSEILPINLSDIIPNASMEAI-----DLIWQLCSWDPLRRPTADQALQHPFF 283
+ + P +L ++ + E + D + L +P R +A QAL HP+F
Sbjct: 245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 168/295 (56%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLAFRHEN 84
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 142
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 263 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 168/295 (56%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 102
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + M +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHL--SNDHICYFLYQILRGLKYI 160
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ T LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 281 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA++K+ F C LRE+K L + H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKIS-PFEHQTYCQRTLREIKILLRFRHEN 86
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 144
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 265 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 169/295 (57%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 86
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHL--SNDHICYFLYQILRGLKYI 144
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR + TEYV+TRWYRAPE++L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 265 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 168/295 (56%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 86
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 144
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYT----EYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR +T E V+TRWYRAPE++L
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 265 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 171/296 (57%), Gaps = 21/296 (7%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L+ +G+G G V A++ VA+KK+ F C LRE++ L + H N
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQRTLREIQILLRFRHEN 102
Query: 62 IIKLKEVVRENN-----ELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
+I +++++R + +++ + + ME +LY +++ +Q+ S I F+ Q+L+GL ++
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQL--SNDHICYFLYQILRGLKYI 160
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLAR----ELSSMPPYTEYVSTRWYRAPEVLL 171
H HRDLKP NLL+ T LKI DFGLAR E TE V+TRWYRAPE++L
Sbjct: 161 HSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISR 231
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMK- 279
Query: 232 LISISYSEILP----INLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ +Y + LP + + + P + +A+DL+ ++ +++P +R T ++AL HP+
Sbjct: 280 --ARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYL 333
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 168/295 (56%), Gaps = 19/295 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLNHPN 61
RY L +G+G G V A++ VA+KK+ F C LRE+K L + H N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHEN 87
Query: 62 IIKLKEVVR-----ENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
II + +++R + +++ + + ME +LY +++ + + S I F+ Q+L+GL ++
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL--SNDHICYFLYQILRGLKYI 145
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYT----EYVSTRWYRAPEVLL 171
H HRDLKP NLL+ LKI DFGLAR +T E V+TRWYRAPE++L
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI-- 229
S Y+ +ID+W+VG ILAE+ + PIFPG +DQL + ILG+P N+
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 265
Query: 230 -SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ L+S+ + +P N + PNA +A+DL+ ++ +++P +R +QAL HP+
Sbjct: 266 RNYLLSLPHKNKVPWN--RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 164/309 (53%), Gaps = 30/309 (9%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKF---YFWEECMNLREVKALRKLNHPNIIKLK 66
+G G G V A + + E VA+KK+ R F F + RE+ L+ + H N+I L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY--RELLLLKHMQHENVIGLL 89
Query: 67 EV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
+V +R + + + +M+ +L IM + FSE +I+ + QML+GL ++H G
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GLKFSEEKIQYLVYQMLKGLKYIHSAG 146
Query: 121 YFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRDLKP NL V D LKI DFGLAR + T YV TRWYRAPEV+L Y+
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQT 204
Query: 180 IDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSE 239
+D+W+VG I+AE+ T +F G +DQL ++ + G P T F + N + SY +
Sbjct: 205 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG-TEFVQKLNDK--AAKSYIQ 261
Query: 240 ILP----INLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF------NVETWV 289
LP + + + P AS +A DL+ ++ D +R TA QAL HPFF ET
Sbjct: 262 SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEA 321
Query: 290 PYPLHDPLE 298
P D LE
Sbjct: 322 QQPFDDSLE 330
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 165/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L +
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNA 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 164/309 (53%), Gaps = 30/309 (9%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKF---YFWEECMNLREVKALRKLNHPNIIKLK 66
+G G G V A + + E VA+KK+ R F F + RE+ L+ + H N+I L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA--YRELLLLKHMQHENVIGLL 107
Query: 67 EV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
+V +R + + + +M+ +L IM + FSE +I+ + QML+GL ++H G
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIM---GMEFSEEKIQYLVYQMLKGLKYIHSAG 164
Query: 121 YFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRDLKP NL V D LKI DFGLAR + T YV TRWYRAPEV+L Y+
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 180 IDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSE 239
+D+W+VG I+AE+ T +F G +DQL ++ + G P T F + N + SY +
Sbjct: 223 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG-TEFVQKLNDK--AAKSYIQ 279
Query: 240 ILP----INLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF------NVETWV 289
LP + + + P AS +A DL+ ++ D +R TA QAL HPFF ET
Sbjct: 280 SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEA 339
Query: 290 PYPLHDPLE 298
P D LE
Sbjct: 340 QQPFDDSLE 348
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 158
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 159 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 216
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 276
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 277 YIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 159
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 217
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 278 YIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 145
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 203
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 264 YIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 135
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 193
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 254 YIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 165/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 146
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNW 204
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 265 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 149
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 150 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 207
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 267
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 268 YIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 165/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 146
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNW 204
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 265 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 174/312 (55%), Gaps = 40/312 (12%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVV 69
LG+G G V A + T EIVA+KK++ LRE+K L+ H NII + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 70 R----EN-NELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
R EN NE++ I E M+ +L+ ++ + + S+ I+ F+ Q L+ + +H + HR
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 125 DLKPENLLVTNDV-LKIADFGLAREL------SSMPP-----YTEYVSTRWYRAPEVLLQ 172
DLKP NLL+ ++ LK+ DFGLAR + +S P TEYV+TRWYRAPEV+L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLT 196
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRL 232
S+ YS A+D+W+ G ILAELF PIFPG QL + I+G P + N R
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT------PHSDNDLRC 250
Query: 233 I----SISYSEILPIN----LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
I + Y + LP+ L + P + + IDL+ ++ +DP +R TA +AL+HP+
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY-- 308
Query: 285 VETWVPYPLHDP 296
++T+ HDP
Sbjct: 309 LQTY-----HDP 315
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 162
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 163 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 220
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 280
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 281 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 150
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 151 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 208
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 268
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 269 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 150
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 151 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 208
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 268
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 269 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 151
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 209
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 270 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 165/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 146
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR + T YV+TRWYRAPE++L
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNW 204
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 265 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 151
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 209
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 270 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 144
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 202
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 263 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 144
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 202
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 263 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ ++ ++ ++ + Q+L+GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKL--TDDHVQFLIYQILRGLK 135
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 193
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 254 YIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 159
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 217
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 278 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 145
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 203
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 264 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 158
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 159 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 216
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 276
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 277 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 141
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 199
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 260 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 141
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 199
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 260 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 137
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 138 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 195
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 255
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 256 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 136
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 137 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 194
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 254
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 255 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 145
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 203
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 264 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 144
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 202
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 263 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 135
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 193
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 145
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 203
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 264 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 25/304 (8%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-----KRKFYFWEECMNLREVKALR 55
+ +Y+ L ++G GT G V+KA + +T + VA+KK+ K F LRE+K L+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF----PITALREIKILQ 72
Query: 56 KLNHPNIIKLKEVVREN--------NELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMS 107
L H N++ L E+ R ++ +F++ EH+L ++ + F+ EI+ M
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 108 QMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELS----SMP-PYTEYVST 161
+L GL ++HRN HRD+K N+L+T D VLK+ADFGLAR S S P Y V T
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWT 221
WYR PE+LL Y P ID+W G I+AE++T SPI G++E QL + + G+
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 222 AFPEATNISRLISISYSEILPINLSDIIPNASME--AIDLIWQLCSWDPLRRPTADQALQ 279
+P N + + + D + + A+DLI +L DP +R +D AL
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 280 HPFF 283
H FF
Sbjct: 313 HDFF 316
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 136
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 137 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 194
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 254
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 255 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 141
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 199
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 260 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 141
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 142 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 199
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 260 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 146
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 147 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 204
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 265 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 144
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 145 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 202
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 263 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 138
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 139 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 196
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 256
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 257 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 25/304 (8%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-----KRKFYFWEECMNLREVKALR 55
+ +Y+ L ++G GT G V+KA + +T + VA+KK+ K F LRE+K L+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF----PITALREIKILQ 72
Query: 56 KLNHPNIIKLKEVVREN--------NELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMS 107
L H N++ L E+ R ++ +F++ EH+L ++ + F+ EI+ M
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 108 QMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELS----SMP-PYTEYVST 161
+L GL ++HRN HRD+K N+L+T D VLK+ADFGLAR S S P Y V T
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWT 221
WYR PE+LL Y P ID+W G I+AE++T SPI G++E QL + + G+
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 222 AFPEATNISRLISISYSEILPINLSDIIPNASME--AIDLIWQLCSWDPLRRPTADQALQ 279
+P N + + + D + + A+DLI +L DP +R +D AL
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 280 HPFF 283
H FF
Sbjct: 313 HDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 25/304 (8%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-----KRKFYFWEECMNLREVKALR 55
+ +Y+ L ++G GT G V+KA + +T + VA+KK+ K F LRE+K L+
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF----PITALREIKILQ 71
Query: 56 KLNHPNIIKLKEVVREN--------NELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMS 107
L H N++ L E+ R ++ +F++ EH+L ++ + F+ EI+ M
Sbjct: 72 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 131
Query: 108 QMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELS----SMP-PYTEYVST 161
+L GL ++HRN HRD+K N+L+T D VLK+ADFGLAR S S P Y V T
Sbjct: 132 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWT 221
WYR PE+LL Y P ID+W G I+AE++T SPI G++E QL + + G+
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251
Query: 222 AFPEATNISRLISISYSEILPINLSDIIPNASME--AIDLIWQLCSWDPLRRPTADQALQ 279
+P N + + + D + + A+DLI +L DP +R +D AL
Sbjct: 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311
Query: 280 HPFF 283
H FF
Sbjct: 312 HDFF 315
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGL R T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 163/297 (54%), Gaps = 14/297 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKK-MKRKFYFWEECMNLREVKALRKLNH 59
ME+Y+ L +G+G+ G V K N +T IVA+KK ++ + + +RE+K L++L H
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
N++ L EV ++ + +FE+++H + + ++ ++ Q++ G+ H +
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH 143
Query: 120 GYFHRDLKPENLLVT-NDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSSYS 177
HRD+KPEN+LV+ + V+K+ DFG AR L++ Y + V+TRWYRAPE+L+ Y
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILG------APDWTAFPEATNISR 231
A+D+WA+G ++ E+F P+FPGDS+IDQLY + LG + P + R
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV-R 262
Query: 232 LISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETW 288
L I E L P S IDL + DP +RP + L H FF ++ +
Sbjct: 263 LPEIKEREPLERRY----PKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGF 315
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ + F RE++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 151
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 152 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 209
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 270 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 25/304 (8%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-----KRKFYFWEECMNLREVKALR 55
+ +Y+ L ++G GT G V+KA + +T + VA+KK+ K F LRE+K L+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF----PITALREIKILQ 72
Query: 56 KLNHPNIIKLKEVVRENNE--------LFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMS 107
L H N++ L E+ R ++ +F++ EH+L ++ + F+ EI+ M
Sbjct: 73 LLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 108 QMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELS----SMP-PYTEYVST 161
+L GL ++HRN HRD+K N+L+T D VLK+ADFGLAR S S P Y V T
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWT 221
WYR PE+LL Y P ID+W G I+AE++T SPI G++E QL + + G+
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 222 AFPEATNISRLISISYSEILPINLSDIIPNASME--AIDLIWQLCSWDPLRRPTADQALQ 279
+P N + + + D + + A+DLI +L DP +R +D AL
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 280 HPFF 283
H FF
Sbjct: 313 HDFF 316
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 164/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI D+GLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 168/298 (56%), Gaps = 25/298 (8%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V +++V++ +AVKK+ R F RE++ L+ + H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 168
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T YV+TRWYRAPE++L
Sbjct: 169 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNW 226
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG I+QL ++ + G P A+ ISR+
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT------PPASVISRMP 280
Query: 234 S---ISYSEILP----INLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
S +Y LP N +D+ A+ A+DL+ ++ D +R TA +AL HP+F+
Sbjct: 281 SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFS 338
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR +V+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 162
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR YV+TRWYRAPE++L
Sbjct: 163 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMXGYVATRWYRAPEIMLNW 220
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 280
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 281 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR +V+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 167/302 (55%), Gaps = 18/302 (5%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK----RKFYFWEECMNLREVKALRKLN 58
RY+ + E+G G G VYKA + + VA+K ++ +REV LR+L
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 59 ---HPNIIKLKEVV---RENNEL--FFIFEYMEHNLYHIMRERQIPFSEGE-IRSFMSQM 109
HPN+++L +V R + E+ +FE+++ +L + + P E I+ M Q
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 110 LQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
L+GL +H N HRDLKPEN+LVT+ +K+ADFGLAR S T V T WYRAPE
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPE 189
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
VLLQS+ Y+ +DMW+VG I AE+F P+F G+SE DQL K+ ++G P +P +
Sbjct: 190 VLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 248
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETW 288
+ R ++ P + ++P L+ ++ +++P +R +A +ALQH + + +
Sbjct: 249 LPR---GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG 305
Query: 289 VP 290
P
Sbjct: 306 NP 307
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 135
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR +V+TRWYRAPE++L
Sbjct: 136 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMAGFVATRWYRAPEIMLNW 193
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 254 YIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 169/301 (56%), Gaps = 19/301 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM---NLREVKALRKLN- 58
RY+ + E+G G G VYKA + + VA+K ++ EE + +REV LR+L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEA 62
Query: 59 --HPNIIKLKEVV---RENNEL--FFIFEYMEHNLYHIMRERQIPFSEGE-IRSFMSQML 110
HPN+++L +V R + E+ +FE+++ +L + + P E I+ M Q L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEV 169
+GL +H N HRDLKPEN+LVT+ +K+ADFGLAR S V T WYRAPEV
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
Query: 170 LLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI 229
LLQS+ Y+ +DMW+VG I AE+F P+F G+SE DQL K+ ++G P +P ++
Sbjct: 183 LLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 230 SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWV 289
R ++ P + ++P L+ ++ +++P +R +A +ALQH + + +
Sbjct: 242 PR---GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGN 298
Query: 290 P 290
P
Sbjct: 299 P 299
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 173/312 (55%), Gaps = 40/312 (12%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVV 69
LG+G G V A + T EIVA+KK++ LRE+K L+ H NII + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 70 R----EN-NELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
R EN NE++ I E M+ +L+ ++ + + S+ I+ F+ Q L+ + +H + HR
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 125 DLKPENLLVTNDV-LKIADFGLAREL------SSMPP-----YTEYVSTRWYRAPEVLLQ 172
DLKP NLL+ ++ LK+ DFGLAR + +S P TE V+TRWYRAPEV+L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLT 196
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRL 232
S+ YS A+D+W+ G ILAELF PIFPG QL + I+G P + N R
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT------PHSDNDLRC 250
Query: 233 I----SISYSEILPIN----LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
I + Y + LP+ L + P + + IDL+ ++ +DP +R TA +AL+HP+
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY-- 308
Query: 285 VETWVPYPLHDP 296
++T+ HDP
Sbjct: 309 LQTY-----HDP 315
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DF LAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 186/333 (55%), Gaps = 54/333 (16%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM-NLREVKALRKLN- 58
+ +Y+++++LG G G V+K+ + T E+VAVKK+ F + RE+ L +L+
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 59 HPNIIKLKEVVRENNE--LFFIFEYMEHNLYHIMRERQI-PFSEGEIRSFMSQMLQGLAH 115
H NI+ L V+R +N+ ++ +F+YME +L+ ++R + P + + + Q+++ + +
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV---VYQLIKVIKY 124
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSM---------------------- 152
+H G HRD+KP N+L+ + +K+ADFGL+R ++
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 153 PPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVC 212
P T+YV+TRWYRAPE+LL S+ Y+ IDMW++G IL E+ PIFPG S ++QL +
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER-- 242
Query: 213 CILGAPDWTAFPEATNI----SRLISISYSEILPINLSD--------------IIPNA-- 252
I+G D+ + + +I ++ + S E + I S+ I P A
Sbjct: 243 -IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADC 301
Query: 253 SMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
+ EA+DL+ +L ++P +R +A+ AL+HPF ++
Sbjct: 302 NEEALDLLDKLLQFNPNKRISANDALKHPFVSI 334
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI FGLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 173/312 (55%), Gaps = 40/312 (12%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVV 69
LG+G G V A + T EIVA+KK++ LRE+K L+ H NII + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 70 R----EN-NELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
R EN NE++ I E M+ +L+ ++ + + S+ I+ F+ Q L+ + +H + HR
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVISTQML--SDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 125 DLKPENLLVTNDV-LKIADFGLAREL------SSMPP-----YTEYVSTRWYRAPEVLLQ 172
DLKP NLL+ ++ LK+ DFGLAR + +S P E+V+TRWYRAPEV+L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT 196
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRL 232
S+ YS A+D+W+ G ILAELF PIFPG QL + I+G P + N R
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT------PHSDNDLRC 250
Query: 233 I----SISYSEILPIN----LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
I + Y + LP+ L + P + + IDL+ ++ +DP +R TA +AL+HP+
Sbjct: 251 IESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY-- 308
Query: 285 VETWVPYPLHDP 296
++T+ HDP
Sbjct: 309 LQTY-----HDP 315
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 169/301 (56%), Gaps = 19/301 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM---NLREVKALRKLN- 58
RY+ + E+G G G VYKA + + VA+K ++ EE + +REV LR+L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEA 62
Query: 59 --HPNIIKLKEVV---RENNEL--FFIFEYMEHNLYHIMRERQIPFSEGE-IRSFMSQML 110
HPN+++L +V R + E+ +FE+++ +L + + P E I+ M Q L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEV 169
+GL +H N HRDLKPEN+LVT+ +K+ADFGLAR S V T WYRAPEV
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEV 182
Query: 170 LLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI 229
LLQS+ Y+ +DMW+VG I AE+F P+F G+SE DQL K+ ++G P +P ++
Sbjct: 183 LLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 230 SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWV 289
R ++ P + ++P L+ ++ +++P +R +A +ALQH + + +
Sbjct: 242 PR---GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGN 298
Query: 290 P 290
P
Sbjct: 299 P 299
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR T V+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGXVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI D GLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI D GLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 169/301 (56%), Gaps = 19/301 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM---NLREVKALRKLN- 58
RY+ + E+G G G VYKA + + VA+K ++ EE + +REV LR+L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEA 62
Query: 59 --HPNIIKLKEVV---RENNEL--FFIFEYMEHNLYHIMRERQIPFSEGE-IRSFMSQML 110
HPN+++L +V R + E+ +FE+++ +L + + P E I+ M Q L
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEV 169
+GL +H N HRDLKPEN+LVT+ +K+ADFGLAR S V T WYRAPEV
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEV 182
Query: 170 LLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI 229
LLQS+ Y+ +DMW+VG I AE+F P+F G+SE DQL K+ ++G P +P ++
Sbjct: 183 LLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 230 SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWV 289
R ++ P + ++P L+ ++ +++P +R +A +ALQH + + +
Sbjct: 242 PR---GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGN 298
Query: 290 P 290
P
Sbjct: 299 P 299
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 162/291 (55%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 159
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI DFGLAR V+TRWYRAPE++L
Sbjct: 160 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMXGXVATRWYRAPEIMLNW 217
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 278 YIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
ERY+ L +G G G V AF+ +T VAVKK+ R F RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + E N+++ + M +L +I++ +++ ++ ++ + Q+L+GL
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL--TDDHVQFLIYQILRGLK 139
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H HRDLKP NL V D LKI D GLAR T YV+TRWYRAPE++L
Sbjct: 140 YIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD--EMTGYVATRWYRAPEIMLNW 197
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AEL T +FPG IDQL + ++G P + ++ S
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 234 SI-SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I S +++ +N +++ A+ A+DL+ ++ D +R TA QAL H +F
Sbjct: 258 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 167/308 (54%), Gaps = 28/308 (9%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
+R + L +G G G V A++ + VAVKK+ R F RE++ L+ L H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + + +E++ + M +L +I++ + + S+ ++ + Q+L+GL
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQAL--SDEHVQFLVYQLLRGLK 145
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H G HRDLKP N+ V D L+I DFGLAR+ T YV+TRWYRAPE++L
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE--EMTGYVATRWYRAPEIMLNW 203
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA-TNISRL 232
Y+ +D+W+VG I+AEL +FPG IDQL ++ ++G P PE IS
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS----PEVLAKISSE 259
Query: 233 ISISYSEILP----INLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETW 288
+ +Y + LP +LS I A+ AIDL+ ++ D +R +A +AL H +F+
Sbjct: 260 HARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS---- 315
Query: 289 VPYPLHDP 296
HDP
Sbjct: 316 ---QYHDP 320
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 170/297 (57%), Gaps = 20/297 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETY-EIVAVKKMKRKFYFWEECM---NLREVKALRKL 57
++Y+ + E+G+G G V+KA +++ VA+K+++ + EE M +REV LR L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIREVAVLRHL 68
Query: 58 N---HPNIIKLKEVV---RENNE--LFFIFEYMEHNLYHIMRERQIPFSEGE-IRSFMSQ 108
HPN+++L +V R + E L +FE+++ +L + + P E I+ M Q
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 109 MLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+L+GL +H + HRDLKP+N+LVT+ +K+ADFGLAR S T V T WYRAP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
EVLLQSS Y+ +D+W+VG I AE+F P+F G S++DQL K+ ++G P +P
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+ R S S PI + + DL+ + +++P +R +A AL HP+F
Sbjct: 248 ALPRQAFHSKS-AQPIE--KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 170/297 (57%), Gaps = 20/297 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETY-EIVAVKKMKRKFYFWEECM---NLREVKALRKL 57
++Y+ + E+G+G G V+KA +++ VA+K+++ + EE M +REV LR L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIREVAVLRHL 68
Query: 58 N---HPNIIKLKEVV---RENNE--LFFIFEYMEHNLYHIMRERQIPFSEGE-IRSFMSQ 108
HPN+++L +V R + E L +FE+++ +L + + P E I+ M Q
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 109 MLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+L+GL +H + HRDLKP+N+LVT+ +K+ADFGLAR S T V T WYRAP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
EVLLQSS Y+ +D+W+VG I AE+F P+F G S++DQL K+ ++G P +P
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+ R S S PI + + DL+ + +++P +R +A AL HP+F
Sbjct: 248 ALPRQAFHSKSA-QPIE--KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 170/297 (57%), Gaps = 20/297 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETY-EIVAVKKMKRKFYFWEECM---NLREVKALRKL 57
++Y+ + E+G+G G V+KA +++ VA+K+++ + EE M +REV LR L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIREVAVLRHL 68
Query: 58 N---HPNIIKLKEVV---RENNE--LFFIFEYMEHNLYHIMRERQIPFSEGE-IRSFMSQ 108
HPN+++L +V R + E L +FE+++ +L + + P E I+ M Q
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 109 MLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+L+GL +H + HRDLKP+N+LVT+ +K+ADFGLAR S T V T WYRAP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
EVLLQSS Y+ +D+W+VG I AE+F P+F G S++DQL K+ ++G P +P
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+ R S S PI + + DL+ + +++P +R +A AL HP+F
Sbjct: 248 ALPRQAFHSKSA-QPIE--KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 167/308 (54%), Gaps = 28/308 (9%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
+R + L +G G G V A++ + VAVKK+ R F RE++ L+ L H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + + +E++ + M +L +I++ + + S+ ++ + Q+L+GL
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQAL--SDEHVQFLVYQLLRGLK 145
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H G HRDLKP N+ V D L+I DFGLAR+ T YV+TRWYRAPE++L
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE--EMTGYVATRWYRAPEIMLNW 203
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA-TNISRL 232
Y+ +D+W+VG I+AEL +FPG IDQL ++ ++G P PE IS
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS----PEVLAKISSE 259
Query: 233 ISISYSEILP----INLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETW 288
+ +Y + LP +LS I A+ AIDL+ ++ D +R +A +AL H +F+
Sbjct: 260 HARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS---- 315
Query: 289 VPYPLHDP 296
HDP
Sbjct: 316 ---QYHDP 320
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 167/308 (54%), Gaps = 28/308 (9%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFY-FWEECMNLREVKALRKLNHP 60
+R + L +G G G V A++ + VAVKK+ R F RE++ L+ L H
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 79
Query: 61 NIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L +V + + +E++ + M +L +I++ + + S+ ++ + Q+L+GL
Sbjct: 80 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQAL--SDEHVQFLVYQLLRGLK 137
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H G HRDLKP N+ V D L+I DFGLAR+ T YV+TRWYRAPE++L
Sbjct: 138 YIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE--EMTGYVATRWYRAPEIMLNW 195
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA-TNISRL 232
Y+ +D+W+VG I+AEL +FPG IDQL ++ ++G P PE IS
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS----PEVLAKISSE 251
Query: 233 ISISYSEILP----INLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETW 288
+ +Y + LP +LS I A+ AIDL+ ++ D +R +A +AL H +F+
Sbjct: 252 HARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS---- 307
Query: 289 VPYPLHDP 296
HDP
Sbjct: 308 ---QYHDP 312
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 171/323 (52%), Gaps = 42/323 (13%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNI 62
RY L+ LG G G V+ A + + + VA+KK+ LRE+K +R+L+H NI
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP-QSVKHALREIKIIRRLDHDNI 70
Query: 63 IKLKEVV--------------RENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQ 108
+K+ E++ E N ++ + EYME +L +++ Q P E R FM Q
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE--QGPLLEEHARLFMYQ 128
Query: 109 MLQGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLAREL----SSMPPYTEYVSTR 162
+L+GL ++H HRDLKP NL + + VLKI DFGLAR + S +E + T+
Sbjct: 129 LLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 163 WYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTA 222
WYR+P +LL ++Y+ AIDMWA G I AE+ T +F G E++Q+ + +
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL--------ES 240
Query: 223 FPEATNISRLISISYSEILPIN--------LSDIIPNASMEAIDLIWQLCSWDPLRRPTA 274
P R +S + N L+ ++P S EA+D + Q+ ++ P+ R TA
Sbjct: 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTA 300
Query: 275 DQALQHPFFNVETWVPYPLHDPL 297
++AL HP+ ++ + +P+ +P+
Sbjct: 301 EEALSHPYMSIYS---FPMDEPI 320
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 319 PYINV--W-----YDPAEV 330
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 162/289 (56%), Gaps = 24/289 (8%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVV 69
+G+G+ G V++A VE+ E VA+KK+ + F RE++ +R + HPN++ LK
Sbjct: 48 IGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKN-----RELQIMRIVKHPNVVDLKAFF 101
Query: 70 RENNE------LFFIFEYMEHNLYHIMR-----ERQIPFSEGEIRSFMSQMLQGLAHMHR 118
N + L + EY+ +Y R ++ +P I+ +M Q+L+ LA++H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL--IKLYMYQLLRSLAYIHS 159
Query: 119 NGYFHRDLKPENLLVT--NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
G HRD+KP+NLL+ + VLK+ DFG A+ L + P + +R+YRAPE++ +++Y
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNY 219
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+ ID+W+ G ++AEL P+FPG+S IDQL ++ +LG P T +
Sbjct: 220 TTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI--KTMNPNYMEHK 277
Query: 237 YSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+ +I P S + P +AIDLI +L + P R TA +AL HPFF+
Sbjct: 278 FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFD 326
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 104
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 160
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P Y+ +R+YRAPE
Sbjct: 161 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 220
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 279
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 280 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 335
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 336 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 359
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 174/333 (52%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNIV 76
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 132
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P Y+ +R+YRAPE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
++ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 252 -PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 307
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 308 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 331
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 110
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 166
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P Y+ +R+YRAPE
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 226
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 285
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 286 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 341
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 342 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 365
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 114
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 170
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P Y+ +R+YRAPE
Sbjct: 171 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 230
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 289
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 290 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 345
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 346 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 369
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 81
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 137
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P Y+ +R+YRAPE
Sbjct: 138 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 197
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 256
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 257 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 312
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 313 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 336
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 112
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 168
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P Y+ +R+YRAPE
Sbjct: 169 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 228
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 287
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 288 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 343
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 344 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 367
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 155
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 211
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P Y+ +R+YRAPE
Sbjct: 212 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 271
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 330
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 331 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 386
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 387 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 410
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 76
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 132
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P Y+ +R+YRAPE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 307
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 308 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 331
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGI 132
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 191
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 312 PYINV--W-----YDPAEV 323
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 89
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 145
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P Y+ +R+YRAPE
Sbjct: 146 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 205
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 264
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 265 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 320
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 321 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 344
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 159/297 (53%), Gaps = 29/297 (9%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKF---YFWEECMNLREVKALRKLNHP 60
Y+ L+ +G G G V A + T VA+KK+ R F F + RE++ L+ + H
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRA--YRELRLLKHMRHE 84
Query: 61 NIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
N+I L E + + + + + +M +L +M+ ++ E I+ + QML+GL
Sbjct: 85 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKL--GEDRIQFLVYQMLKGLR 142
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
++H G HRDLKP NL V D LKI DFGLAR+ S V TRWYRAPEV+L
Sbjct: 143 YIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS--EMXGXVVTRWYRAPEVILNW 200
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y+ +D+W+VG I+AE+ T +F G +DQL ++ + G P A + RL
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT------PPAEFVQRLQ 254
Query: 234 S---ISYSEILP----INLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
S +Y + LP + + I+ NAS A++L+ ++ D +R TA +AL HP+F
Sbjct: 255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 319 PYINV--W-----YDPAEV 330
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNIV 76
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 132
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P Y+ +R+YRAPE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 307
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 308 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 331
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 159/305 (52%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 EATNISRLISISYSEILPINL--SDIIPN--ASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L +D N + +A DL+ ++ DP +R + D ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 165/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 177
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 236
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296
Query: 225 EATNISRLISISYSEILPINL--SDIIPN--ASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L +D N + +A DL+ ++ DP +R + D ALQH
Sbjct: 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 357 PYINV--W-----YDPAEV 368
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 158/305 (51%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 156/305 (51%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPD--------WTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 225 EATNISRLISISYSEILPINL--SDIIPN--ASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L +D N + +A DL+ ++ D +R + D+ALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 177
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 236
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 237 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 357 PYINV--W-----YDPAEV 368
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 140
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 199
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 259
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 260 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 319
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 320 PYINV--W-----YDPAEV 331
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 319 PYINV--W-----YDPAEV 330
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 140
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 199
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 200 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 259
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 260 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 319
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 320 PYINV--W-----YDPAEV 331
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 138
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 139 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 197
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 198 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 257
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 258 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 317
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 318 PYINV--W-----YDPAEV 329
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 319 PYINV--W-----YDPAEV 330
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 133
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 192
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 193 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 252
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 253 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 312
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 313 PYINV--W-----YDPAEV 324
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 133
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 192
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 193 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 252
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 253 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 312
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 313 PYINV--W-----YDPAEV 324
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 31/319 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 132
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 191
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + +++ ++ P +L S+ + +A DL+ ++ DP +R + D ALQH
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311
Query: 281 PFFNVETWVPYPLHDPLEL 299
P+ NV W +DP E+
Sbjct: 312 PYINV--W-----YDPAEV 323
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 156/305 (51%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPD--------WTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 225 EATNISRLISISYSEILPINL--SDIIPN--ASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L +D N + +A DL+ ++ D +R + D+ALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 146/263 (55%), Gaps = 21/263 (7%)
Query: 48 LREVKALRKLNHPNIIKLKEVVRENNE-----LFFIFEYMEHNLYHIMRERQIPFSEGEI 102
LRE++ L +HPNI+ L+++ E L+ + E M +L ++ +++I S I
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 103 RSFMSQMLQGLAHMHRNGYFHRDLKPEN-LLVTNDVLKIADFGLARELSSMPPYTEYVST 161
+ FM +L GL +H G HRDL P N LL N+ + I DF LARE ++ T YV+
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH 196
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--- 218
RWYRAPE+++Q ++ +DMW+ G ++AE+F +F G + +QL K+ ++G P
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 219 DWTAF--PEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQ 276
D F P A + R S S + + ++P A A+DLI ++ ++P RR + +Q
Sbjct: 257 DVVMFSSPSARDYLR---NSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQ 313
Query: 277 ALQHPFFNVETWVPYPLHDPLEL 299
AL+HP+F L DPL+L
Sbjct: 314 ALRHPYFE-------SLFDPLDL 329
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 146/263 (55%), Gaps = 21/263 (7%)
Query: 48 LREVKALRKLNHPNIIKLKEVVRENNE-----LFFIFEYMEHNLYHIMRERQIPFSEGEI 102
LRE++ L +HPNI+ L+++ E L+ + E M +L ++ +++I S I
Sbjct: 77 LREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHI 136
Query: 103 RSFMSQMLQGLAHMHRNGYFHRDLKPEN-LLVTNDVLKIADFGLARELSSMPPYTEYVST 161
+ FM +L GL +H G HRDL P N LL N+ + I DF LARE ++ T YV+
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH 196
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--- 218
RWYRAPE+++Q ++ +DMW+ G ++AE+F +F G + +QL K+ ++G P
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 219 DWTAF--PEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQ 276
D F P A + R S S + + ++P A A+DLI ++ ++P RR + +Q
Sbjct: 257 DVVMFSSPSARDYLR---NSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQ 313
Query: 277 ALQHPFFNVETWVPYPLHDPLEL 299
AL+HP+F L DPL+L
Sbjct: 314 ALRHPYFE-------SLFDPLDL 329
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 110
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 166
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P + +R+YRAPE
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 226
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 285
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 286 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 341
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 342 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 365
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 156/305 (51%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPD--------WTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 225 EATNISRLISISYSEILPINL--SDIIPN--ASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L +D N + +A DL+ ++ D +R + D+ALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 76
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 132
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P + +R+YRAPE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 307
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 308 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 331
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 173/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNIV 76
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH----YSRAKQTLPVIYVKLYMYQLF 132
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P + +R+YRAPE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
++ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 252 -PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 307
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 308 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 331
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 88
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 144
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P + +R+YRAPE
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 204
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 263
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 264 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 319
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 320 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 343
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 95
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 151
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P + +R+YRAPE
Sbjct: 152 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 211
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 270
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 271 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 326
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 327 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 350
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 77
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 133
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P + +R+YRAPE
Sbjct: 134 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 193
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 252
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 253 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 308
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 309 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 332
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 76
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 132
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P + +R+YRAPE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 307
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 308 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 331
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 76
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 132
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P + +R+YRAPE
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 251
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 252 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 307
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 308 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 331
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 84
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 140
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P + +R+YRAPE
Sbjct: 141 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 200
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 259
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 260 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 315
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 316 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 339
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 88
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 144
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P + +R+YRAPE
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 204
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 263
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 264 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 319
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 320 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 343
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 172/333 (51%), Gaps = 39/333 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + +G+G+ G VY+A ++ E+VA+KK+ + F RE++ +RKL+H NI+
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-----RELQIMRKLDHCNIV 80
Query: 64 KLKEVVRENNE------LFFIFEYMEHNLYHIMRERQIPFSEGE-------IRSFMSQML 110
+L+ + E L + +Y+ +Y + R +S + ++ +M Q+
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH----YSRAKQTLPVIYVKLYMYQLF 136
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ LA++H G HRD+KP+NLL+ D VLK+ DFG A++L P + +R+YRAPE
Sbjct: 137 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 196
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
++ ++ Y+ +ID+W+ G +LAEL PIFPGDS +DQL ++ +LG P E
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN- 255
Query: 229 ISRLISISYSEILPINLSDII-PNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ +I + + P EAI L +L + P R T +A H FF+
Sbjct: 256 -PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD--- 311
Query: 288 WVPYPLHDPLELRLNNMGSKPNLELNLWDFGTE 320
L DP ++L N P L++F T+
Sbjct: 312 ----ELRDP-NVKLPNGRDTP----ALFNFTTQ 335
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 155/305 (50%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPD--------WTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L S+ + +A DL+ ++ D +R + D+ALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 160/308 (51%), Gaps = 30/308 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V AF+ VAVKK+ R F RE+ L+ +NH
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ + + + QML G+
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGI 137
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR S+ T YV TR+YRAPEV+L
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVIL- 196
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--DWTAFPEAT--- 227
Y +D+W+VG I+ EL S IF G IDQ KV LG P ++ A + T
Sbjct: 197 GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRN 256
Query: 228 ---NISRLISISYSEILPINLSDIIPNAS-------MEAIDLIWQLCSWDPLRRPTADQA 277
N I++ E+ P I P+ S +A DL+ ++ DP +R + D+A
Sbjct: 257 YVENRPAYPGIAFEELFP---DWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 313
Query: 278 LQHPFFNV 285
L+HP+ V
Sbjct: 314 LRHPYITV 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 155/305 (50%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 140
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 199
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 259
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L S+ + +A DL+ ++ D +R + D+ALQH
Sbjct: 260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319
Query: 281 PFFNV 285
P+ NV
Sbjct: 320 PYINV 324
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 155/305 (50%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPD--------WTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L S+ + +A DL+ ++ D +R + D+ALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 155/305 (50%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPD--------WTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L S+ + +A DL+ ++ D +R + D+ALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 156/305 (51%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPD--------WTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 225 EATNISRLISISYSEILPINL--SDIIPN--ASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L +D N + +A DL+ ++ D +R + D+ALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 155/305 (50%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L S+ + +A DL+ ++ D +R + D+ALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 155/305 (50%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 144
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 145 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 203
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 204 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRT 263
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L S+ + +A DL+ ++ D +R + D+ALQH
Sbjct: 264 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 323
Query: 281 PFFNV 285
P+ NV
Sbjct: 324 PYINV 328
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 156/305 (51%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T V TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258
Query: 225 EATNISRLISISYSEILPINL--SDIIPNA--SMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L +D NA + +A DL+ ++ D +R + D+ALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 155/305 (50%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 133
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL- 192
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 193 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRT 252
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L S+ + +A DL+ ++ D +R + D+ALQH
Sbjct: 253 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 312
Query: 281 PFFNV 285
P+ NV
Sbjct: 313 PYINV 317
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 159/308 (51%), Gaps = 30/308 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V AF+ VAVKK+ R F RE+ L+ +NH
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 60 PNIIKL------KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L ++ + E +++ + E M+ NL ++ + + + QML G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + T YV TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--DWTAFPEAT--- 227
Y+ +D+W+VG I+ EL IF G IDQ KV LG P ++ A + T
Sbjct: 199 GMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRN 258
Query: 228 ---NISRLISISYSEILPINLSDIIPNAS-------MEAIDLIWQLCSWDPLRRPTADQA 277
N + I + E+ P I P+ S +A DL+ ++ DP +R + D+A
Sbjct: 259 YVENRPKYPGIKFEELFP---DWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 315
Query: 278 LQHPFFNV 285
L+HP+ V
Sbjct: 316 LRHPYITV 323
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 155/305 (50%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 141
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + +V TR+YRAPEV+L
Sbjct: 142 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVIL- 200
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 260
Query: 225 EATNISRLISISYSEILPINL--SDIIPN--ASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L +D N + +A DL+ ++ D +R + D+ALQH
Sbjct: 261 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 320
Query: 281 PFFNV 285
P+ NV
Sbjct: 321 PYINV 325
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 170/315 (53%), Gaps = 45/315 (14%)
Query: 9 ELGDGTCGCVYKAFNVETYEIV--AVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLK 66
++G GT G VYKA + + A+K+++ C RE+ LR+L HPN+I L+
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC---REIALLRELKHPNVISLQ 84
Query: 67 EVV--RENNELFFIFEYMEHNLYHIMR--------ERQIPFSEGEIRSFMSQMLQGLAHM 116
+V + +++ +F+Y EH+L+HI++ ++ + G ++S + Q+L G+ ++
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 117 HRNGYFHRDLKPENLLVTND-----VLKIADFGLARELSS-MPPYTE---YVSTRWYRAP 167
H N HRDLKP N+LV + +KIAD G AR +S + P + V T WYRAP
Sbjct: 145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI---------DQLYKVCCILGAP 218
E+LL + Y+ AID+WA+G I AEL T PIF E DQL ++ ++G P
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP 264
Query: 219 ---DW---TAFPEATNI----SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDP 268
DW PE + + R + S I + + P++ +A L+ +L + DP
Sbjct: 265 ADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDS--KAFHLLQKLLTMDP 322
Query: 269 LRRPTADQALQHPFF 283
++R T++QA+Q P+F
Sbjct: 323 IKRITSEQAMQDPYF 337
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 153/305 (50%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + V TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L S+ + +A DL+ ++ D +R + D+ALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 175/351 (49%), Gaps = 72/351 (20%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHP 60
+RY+I +G G+ G V +A++ +VA+KK+ R F +C LRE+ L +LNH
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 61 NIIKLKEVV-----RENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+++K+ ++V + +EL+ + E + + + R + +E I++ + +L G+ +
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT-PVYLTELHIKTLLYNLLVGVKY 171
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLAREL-------SSMP-------------P 154
+H G HRDLKP N LV D +K+ DFGLAR + S +P P
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP 231
Query: 155 YTE--------YVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTL----------- 195
+T+ +V TRWYRAPE++L +Y+ AID+W++G I AEL +
Sbjct: 232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADR 291
Query: 196 SPIFPGDS--------------------EIDQLYKVCCILGAP---DWTAFPEATNISRL 232
P+FPG S DQL + ILG P D A E + R
Sbjct: 292 GPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEAL-EKEDAKRY 350
Query: 233 ISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
I I + + +L++ P +S +AI L+ ++ ++P +R T ++ L HPFF
Sbjct: 351 IRI-FPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 153/305 (50%), Gaps = 24/305 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNH 59
++RY+ L+ +G G G V A++ VA+KK+ R F RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 60 PNIIKLKEV------VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NII L V + E +++ + E M+ NL ++ Q+ + + QML G+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H+H G HRDLKP N++V +D LKI DFGLAR + V TR+YRAPEV+L
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL- 198
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP--------DWTAFP 224
Y +D+W+VG I+ E+ +FPG IDQ KV LG P T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRN 258
Query: 225 EATNISRLISISYSEILPINL----SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
N + S+ ++ P L S+ + +A DL+ ++ D +R + D+ALQH
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 281 PFFNV 285
P+ NV
Sbjct: 319 PYINV 323
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 66/344 (19%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHP 60
+ Y I +G G+ G VY A++ T + VA+KK+ R F +C LRE+ L +L
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 61 NIIKLKEVVRENN-----ELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
II+L +++ ++ EL+ + E + +L + + I +E I++ + +L G
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT-PIFLTEEHIKTILYNLLLGENF 144
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSS----------------------- 151
+H +G HRDLKP N L+ D +K+ DFGLAR ++S
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 152 MPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTL-----------SPIFP 200
T +V TRWYRAPE++L +Y+ +ID+W+ G I AEL + P+FP
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFP 264
Query: 201 GD-----------------SEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEIL-- 241
G S DQL + I+G P + NI++ I Y ++
Sbjct: 265 GSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTP---TEDDLKNINKPEVIKYIKLFPH 321
Query: 242 --PINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
PINL P+ S + I+L+ + ++P +R T DQAL HP+
Sbjct: 322 RKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL 365
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 165/334 (49%), Gaps = 65/334 (19%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
++Y + + LG G+ G V + F++E+ + A+KK+ + + RE+ ++ L+H N
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN-----RELDIMKVLDHVN 61
Query: 62 IIKL-----------------------------------KEVV---RENNELFFIFEYME 83
IIKL K V+ +N L I EY+
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 84 HNLYHIMRE-----RQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVT--ND 136
L+ +++ R IP + I ++ Q+ + + +H G HRD+KP+NLLV ++
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNL--ISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN 179
Query: 137 VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
LK+ DFG A++L P + +R+YRAPE++L ++ Y+P+ID+W++G + EL
Sbjct: 180 TLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
Query: 197 PIFPGDSEIDQLYKVCCILGAPDWTAF----PEATNIS--RLISISYSEILPINLSDIIP 250
P+F G++ IDQL ++ I+G P P T + L + + +ILP +
Sbjct: 240 PLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSL-- 297
Query: 251 NASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
AIDL+ Q+ ++P R +A+ HPFF+
Sbjct: 298 -----AIDLLEQILRYEPDLRINPYEAMAHPFFD 326
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 159/319 (49%), Gaps = 25/319 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
M+R+++ G GT G V T VA+KK+ + F L+ ++ L L+HP
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR--ELQIMQDLAVLHHP 79
Query: 61 NIIKLK-------EVVRENNELFFIFEYMEHNLYHIMR---ERQIPFSEGEIRSFMSQML 110
NI++L+ E R + L + EY+ L+ R RQ+ I+ F+ Q++
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 111 Q--GLAHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRA 166
+ G H+ HRD+KP N+LV + LK+ DFG A++LS P Y+ +R+YRA
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRA 199
Query: 167 PEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA 226
PE++ + Y+ A+D+W+VG I AE+ PIF GD+ QL+++ +LG P +
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259
Query: 227 TNISRLISISYSEILPIN--LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+ + S+ +P + SD + EA DL+ L + P R +AL HP+F+
Sbjct: 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Query: 285 VETWVPYPLHDPLELRLNN 303
LHDP NN
Sbjct: 320 -------ELHDPATKLPNN 331
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 164/349 (46%), Gaps = 73/349 (20%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHP 60
+ Y+I +G G+ G VY A++ + VA+KK+ R F +C LRE+ L +L
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 61 NIIKLKEVV-----RENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
II+L +++ + +EL+ + E + +L + + I +E +++ + +L G
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKT-PIFLTEQHVKTILYNLLLGEKF 146
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSS----------------------- 151
+H +G HRDLKP N L+ D +KI DFGLAR ++S
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 152 ---MPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS-----------P 197
T +V TRWYRAPE++L +Y+ +ID+W+ G I AEL + P
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFP 266
Query: 198 IFPGD-----------------SEIDQLYKVCCILGAPDWTAFPEA--TNISRLISISYS 238
+FPG S DQL + ++G P PE I++ I Y
Sbjct: 267 LFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTP-----PEEDLKCITKQEVIKYI 321
Query: 239 EILP----INLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
++ P I+LS + S E IDL+ + ++ +R T D+AL HP+
Sbjct: 322 KLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYL 370
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 151/318 (47%), Gaps = 40/318 (12%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFW----EECMNLREVKALRKLN 58
RY++L+ +G G+ G V KA++ + ++ VA+K ++ + F EE L ++ K N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQI-PFSEGEIRSFMSQMLQGLAHMH 117
N+I + E N + FE + NLY ++++ + FS +R F +LQ L +H
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 118 RNGYFHRDLKPENLLVTNDV---LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSS 174
+N H DLKPEN+L+ +K+ DFG + YT + +R+YRAPEV+L +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTX-IQSRFYRAPEVIL-GA 274
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
Y IDMW++G ILAEL T P+ PG+ E DQL + +LG P + +S
Sbjct: 275 RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334
Query: 235 IS----YSEILPINLSDIIPNASMEA-------------------------IDLIWQLCS 265
Y + ++ ++ N +D + Q
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394
Query: 266 WDPLRRPTADQALQHPFF 283
WDP R T QAL+HP+
Sbjct: 395 WDPAVRMTPGQALRHPWL 412
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 151/318 (47%), Gaps = 40/318 (12%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFW----EECMNLREVKALRKLN 58
RY++L+ +G G+ G V KA++ + ++ VA+K ++ + F EE L ++ K N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQI-PFSEGEIRSFMSQMLQGLAHMH 117
N+I + E N + FE + NLY ++++ + FS +R F +LQ L +H
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 118 RNGYFHRDLKPENLLVTN---DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSS 174
+N H DLKPEN+L+ +K+ DFG + YT + +R+YRAPEV+L +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTX-IQSRFYRAPEVIL-GA 274
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
Y IDMW++G ILAEL T P+ PG+ E DQL + +LG P + +S
Sbjct: 275 RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334
Query: 235 IS----YSEILPINLSDIIPNASMEA-------------------------IDLIWQLCS 265
Y + ++ ++ N +D + Q
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394
Query: 266 WDPLRRPTADQALQHPFF 283
WDP R T QAL+HP+
Sbjct: 395 WDPAVRMTPGQALRHPWL 412
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 148/318 (46%), Gaps = 40/318 (12%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFW----EECMNLREVKALRKLN 58
RY++L+ +G G G V KA++ + ++ VA+K ++ + F EE L ++ K N
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQI-PFSEGEIRSFMSQMLQGLAHMH 117
N+I + E N + FE + NLY ++++ + FS +R F +LQ L +H
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 118 RNGYFHRDLKPENLLVTN---DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSS 174
+N H DLKPEN+L+ +K+ DFG + + +R+YRAPEV+L +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQSRFYRAPEVIL-GA 274
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
Y IDMW++G ILAEL T P+ PG+ E DQL + +LG P + +S
Sbjct: 275 RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVS 334
Query: 235 IS----YSEILPINLSDIIPNASMEA-------------------------IDLIWQLCS 265
Y + ++ ++ N +D + Q
Sbjct: 335 XKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLE 394
Query: 266 WDPLRRPTADQALQHPFF 283
WDP R T QAL+HP+
Sbjct: 395 WDPAVRMTPGQALRHPWL 412
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 156/295 (52%), Gaps = 24/295 (8%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL-NHPNI 62
Y+++ +LG G V++A N+ E V VK +K ++ RE+K L L PNI
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKNKIKREIKILENLRGGPNI 94
Query: 63 IKLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
I L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMG 151
Query: 121 YFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 179 AIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
++DMW++G +LA + F P F G DQL ++ +LG D + + NI + +
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRF 269
Query: 238 SEILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
++IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 270 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 144/286 (50%), Gaps = 35/286 (12%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHP 60
ERY I+ LG G+ G V K + T + AVK + + ++ LREV+ L+KL+HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 61 NIIKLKEVVRENNELFFIFE-YMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI+KL E++ +++ + + E Y L+ + +R+ FSE + + Q+ G+ +MH++
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH 140
Query: 120 GYFHRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDLKPEN+L+ + +KI DFGL+ + + T +Y APEVL +
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL--RGT 198
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
Y D+W+ G IL L + +P F G +E D L +V A D P+ IS
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD---LPQWRTISD---- 251
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+A DLI ++ ++ P R TA Q L+HP
Sbjct: 252 -------------------DAKDLIRKMLTFHPSLRITATQCLEHP 278
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 144/286 (50%), Gaps = 35/286 (12%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHP 60
ERY I+ LG G+ G V K + T + AVK + + ++ LREV+ L+KL+HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 61 NIIKLKEVVRENNELFFIFE-YMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI+KL E++ +++ + + E Y L+ + +R+ FSE + + Q+ G+ +MH++
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH 140
Query: 120 GYFHRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDLKPEN+L+ + +KI DFGL+ + + T +Y APEVL +
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL--RGT 198
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
Y D+W+ G IL L + +P F G +E D L +V A D P+ IS
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD---LPQWRTISD---- 251
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+A DLI ++ ++ P R TA Q L+HP
Sbjct: 252 -------------------DAKDLIRKMLTFHPSLRITATQCLEHP 278
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 144/286 (50%), Gaps = 35/286 (12%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHP 60
ERY I+ LG G+ G V K + T + AVK + + ++ LREV+ L+KL+HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 61 NIIKLKEVVRENNELFFIFE-YMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI+KL E++ +++ + + E Y L+ + +R+ FSE + + Q+ G+ +MH++
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH 140
Query: 120 GYFHRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDLKPEN+L+ + +KI DFGL+ + + T +Y APEVL +
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL--RGT 198
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
Y D+W+ G IL L + +P F G +E D L +V A D P+ IS
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD---LPQWRTISD---- 251
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+A DLI ++ ++ P R TA Q L+HP
Sbjct: 252 -------------------DAKDLIRKMLTFHPSLRITATQCLEHP 278
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 42/292 (14%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR---EVKALRKL 57
+E +K+ LG G+ VY+A ++ T VA+K + +K ++ M R EVK +L
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKK-AMYKAGMVQRVQNEVKIHCQL 68
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
HP+I++L ++N ++ + E M HN + ++ R PFSE E R FM Q++ G+ +
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLE-MCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYV--STRWYRAPEVLLQ 172
+H +G HRDL NLL+T ++ +KIADFGLA +L MP Y T Y +PE+ +
Sbjct: 128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK-MPHEKHYTLCGTPNYISPEIATR 186
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRL 232
S+ + D+W++G + L P F D+ + L KV +L + +F
Sbjct: 187 SA-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV--VLADYEMPSF--------- 234
Query: 233 ISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
S+EA DLI QL +P R + L HPF +
Sbjct: 235 -------------------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 39/298 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFW-----EECMNLR-EVKAL 54
+ Y + + LG G CG V AF +T + VA+K + KRKF + +N+ E++ L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 55 RKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
+KLNHP IIK+K + + + + E ME E + + QML +
Sbjct: 76 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
++H NG HRDLKPEN+L+++ ++KI DFG ++ L T Y APEVL
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 194
Query: 171 LQ--SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
+ ++ Y+ A+D W++G IL C+ G P ++ +
Sbjct: 195 VSVGTAGYNRAVDCWSLGVIL---------------------FICLSGYPPFSEHRTQVS 233
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVE 286
+ I+ +P ++ S +A+DL+ +L DP R T ++AL+HP+ E
Sbjct: 234 LKDQITSGKYNFIP----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 287
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 150/304 (49%), Gaps = 44/304 (14%)
Query: 2 ERYKILEELGDGTCG----CVYKAFNVE-TYEIVAVKKMK-RKFYFWEECMNLREVKALR 55
+ Y + EELG G CV+K +E +I+ KK+ R F E RE + R
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE-----REARICR 83
Query: 56 KLNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
KL HPNI++L + ++E + + +F+ + L+ + R+ +SE + + Q+L+ +A
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESIA 142
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+ H NG HR+LKPENLL+ + +K+ADFGLA E++ + + T Y +PEV
Sbjct: 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV- 201
Query: 171 LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNIS 230
L+ YS +D+WA G IL L P F D + +LY GA D+ + PE
Sbjct: 202 LKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLY-AQIKAGAYDYPS-PE----- 253
Query: 231 RLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
+ + P EA LI + + +P +R TADQAL+ P+ V
Sbjct: 254 ------WDTVTP------------EAKSLIDSMLTVNPKKRITADQALKVPWICNRERVA 295
Query: 291 YPLH 294
+H
Sbjct: 296 SAIH 299
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 39/298 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFW-----EECMNLR-EVKAL 54
+ Y + + LG G CG V AF +T + VA+K + KRKF + +N+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
+KLNHP IIK+K + + + + E ME E + + QML +
Sbjct: 70 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
++H NG HRDLKPEN+L+++ ++KI DFG ++ L T Y APEVL
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 171 LQ--SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
+ ++ Y+ A+D W++G IL C+ G P ++ +
Sbjct: 189 VSVGTAGYNRAVDCWSLGVIL---------------------FICLSGYPPFSEHRTQVS 227
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVE 286
+ I+ +P ++ S +A+DL+ +L DP R T ++AL+HP+ E
Sbjct: 228 LKDQITSGKYNFIP----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 39/298 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFW-----EECMNLR-EVKAL 54
+ Y + + LG G CG V AF +T + VA+K + KRKF + +N+ E++ L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 55 RKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
+KLNHP IIK+K + + + + E ME E + + QML +
Sbjct: 69 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
++H NG HRDLKPEN+L+++ ++KI DFG ++ L T Y APEVL
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 187
Query: 171 LQ--SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
+ ++ Y+ A+D W++G IL C+ G P ++ +
Sbjct: 188 VSVGTAGYNRAVDCWSLGVIL---------------------FICLSGYPPFSEHRTQVS 226
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVE 286
+ I+ +P ++ S +A+DL+ +L DP R T ++AL+HP+ E
Sbjct: 227 LKDQITSGKYNFIP----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 39/298 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFW-----EECMNLR-EVKAL 54
+ Y + + LG G CG V AF +T + VA+K + KRKF + +N+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
+KLNHP IIK+K + + + + E ME E + + QML +
Sbjct: 70 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
++H NG HRDLKPEN+L+++ ++KI DFG ++ L T Y APEVL
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 171 LQ--SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
+ ++ Y+ A+D W++G IL C+ G P ++ +
Sbjct: 189 VSVGTAGYNRAVDCWSLGVIL---------------------FICLSGYPPFSEHRTQVS 227
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVE 286
+ I+ +P ++ S +A+DL+ +L DP R T ++AL+HP+ E
Sbjct: 228 LKDQITSGKYNFIP----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 39/298 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFW-----EECMNLR-EVKAL 54
+ Y + + LG G CG V AF +T + VA+K + KRKF + +N+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 55 RKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
+KLNHP IIK+K + + + + E ME E + + QML +
Sbjct: 70 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
++H NG HRDLKPEN+L+++ ++KI DFG ++ L T Y APEVL
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 188
Query: 171 LQ--SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
+ ++ Y+ A+D W++G IL C+ G P ++ +
Sbjct: 189 VSVGTAGYNRAVDCWSLGVIL---------------------FICLSGYPPFSEHRTQVS 227
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVE 286
+ I+ +P ++ S +A+DL+ +L DP R T ++AL+HP+ E
Sbjct: 228 LKDQITSGKYNFIP----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 136/285 (47%), Gaps = 37/285 (12%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
+++ ELG G VY+ T + A+K +K+ ++ + E+ L +L+HPNII
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNII 111
Query: 64 KLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
KLKE+ E+ + E + L+ + E+ +SE + + Q+L+ +A++H NG
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGY-YSERDAADAVKQILEAVAYLHENGIV 170
Query: 123 HRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRDLKPENLL LKIADFGL++ + T Y APE+ L+ +Y P
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEI-LRGCAYGP 229
Query: 179 AIDMWAVGAILAELF-TLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
+DMW+VG I L P + D DQ R+++ Y
Sbjct: 230 EVDMWSVGIITYILLCGFEPFY--DERGDQFM-------------------FRRILNCEY 268
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
I P S+ A DL+ +L DP +R T QALQHP+
Sbjct: 269 YFISP-----WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 120/230 (52%), Gaps = 17/230 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
M+RY+I +G G+ G V KA++ E VA+K +K K F + EV+ L +N
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI--EVRLLELMNKH 91
Query: 61 N------IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQI-PFSEGEIRSFMSQMLQGL 113
+ I+ LK N L +FE + +NLY ++R S R F QM L
Sbjct: 92 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 151
Query: 114 AHMH--RNGYFHRDLKPENLLVTN---DVLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ H DLKPEN+L+ N +KI DFG + +L + + +R+YR+PE
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR--IYQXIQSRFYRSPE 209
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP 218
VLL Y AIDMW++G IL E+ T P+F G +E+DQ+ K+ +LG P
Sbjct: 210 VLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 120/230 (52%), Gaps = 17/230 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
M+RY+I +G G+ G V KA++ E VA+K +K K F + EV+ L +N
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI--EVRLLELMNKH 110
Query: 61 N------IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQI-PFSEGEIRSFMSQMLQGL 113
+ I+ LK N L +FE + +NLY ++R S R F QM L
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 114 AHMH--RNGYFHRDLKPENLLVTN---DVLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ H DLKPEN+L+ N +KI DFG + +L + + +R+YR+PE
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR--IYQXIQSRFYRSPE 228
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP 218
VLL Y AIDMW++G IL E+ T P+F G +E+DQ+ K+ +LG P
Sbjct: 229 VLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 144/300 (48%), Gaps = 35/300 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHP 60
+ Y++ EELG G V + + T + A K + K + L RE + R L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 61 NIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI++L + + E + +F+ + L+ + R+ +SE + + Q+L+ + H H N
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-YSEADASHCIQQILESVNHCHLN 122
Query: 120 GYFHRDLKPENLLVTND----VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
G HRDLKPENLL+ + +K+ADFGLA E+ + + T Y +PEV L+
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV-LRKD 181
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
Y +DMWA G IL L P F D + +LY+ GA D FP S
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPF-WDEDQHRLYQQ-IKAGAYD---FP---------S 227
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLH 294
+ + P EA DLI ++ + +P +R TA +AL+HP+ + V +H
Sbjct: 228 PEWDTVTP------------EAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMH 275
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 150/304 (49%), Gaps = 44/304 (14%)
Query: 2 ERYKILEELGDGTCG----CVYKAFNVE-TYEIVAVKKMK-RKFYFWEECMNLREVKALR 55
+ Y + EELG G CV+K +E +I+ KK+ R F E RE + R
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE-----REARICR 60
Query: 56 KLNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
KL HPNI++L + ++E + + +F+ + L+ + R+ +SE + + Q+L+ +A
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESIA 119
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+ H NG HR+LKPENLL+ + +K+ADFGLA E++ + + T Y +PEV
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV- 178
Query: 171 LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNIS 230
L+ YS +D+WA G IL L P F D + +LY GA D+ + PE
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLY-AQIKAGAYDYPS-PE----- 230
Query: 231 RLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
+ + P EA LI + + +P +R TADQAL+ P+ V
Sbjct: 231 ------WDTVTP------------EAKSLIDSMLTVNPKKRITADQALKVPWICNRERVA 272
Query: 291 YPLH 294
+H
Sbjct: 273 SAIH 276
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 120/230 (52%), Gaps = 17/230 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
M+RY+I +G G+ G V KA++ E VA+K +K K F + EV+ L +N
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI--EVRLLELMNKH 110
Query: 61 N------IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQI-PFSEGEIRSFMSQMLQGL 113
+ I+ LK N L +FE + +NLY ++R S R F QM L
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 114 AHMH--RNGYFHRDLKPENLLVTN---DVLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+ H DLKPEN+L+ N +KI DFG + +L + + +R+YR+PE
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQR--IYQXIQSRFYRSPE 228
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP 218
VLL Y AIDMW++G IL E+ T P+F G +E+DQ+ K+ +LG P
Sbjct: 229 VLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 150/304 (49%), Gaps = 44/304 (14%)
Query: 2 ERYKILEELGDGTCG----CVYKAFNVE-TYEIVAVKKMK-RKFYFWEECMNLREVKALR 55
+ Y + EELG G CV+K +E +I+ KK+ R F E RE + R
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE-----REARICR 59
Query: 56 KLNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
KL HPNI++L + ++E + + +F+ + L+ + R+ +SE + + Q+L+ +A
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESIA 118
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+ H NG HR+LKPENLL+ + +K+ADFGLA E++ + + T Y +PEV
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV- 177
Query: 171 LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNIS 230
L+ YS +D+WA G IL L P F D + +LY GA D+ + PE
Sbjct: 178 LKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLY-AQIKAGAYDYPS-PE----- 229
Query: 231 RLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
+ + P EA LI + + +P +R TADQAL+ P+ V
Sbjct: 230 ------WDTVTP------------EAKSLIDSMLTVNPKKRITADQALKVPWICNRERVA 271
Query: 291 YPLH 294
+H
Sbjct: 272 SAIH 275
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 144/300 (48%), Gaps = 35/300 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHP 60
+ Y++ EELG G V + + T + A K + K + L RE + R L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 61 NIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI++L + + E + +F+ + L+ + R+ +SE + + Q+L+ + H H N
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-YSEADASHCIQQILESVNHCHLN 122
Query: 120 GYFHRDLKPENLLVTND----VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
G HRDLKPENLL+ + +K+ADFGLA E+ + + T Y +PEV L+
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV-LRKD 181
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
Y +DMWA G IL L P F D + +LY+ GA D FP S
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPF-WDEDQHRLYQQ-IKAGAYD---FP---------S 227
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLH 294
+ + P EA DLI ++ + +P +R TA +AL+HP+ + V +H
Sbjct: 228 PEWDTVTP------------EAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMH 275
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 39/298 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFW-----EECMNLR-EVKAL 54
+ Y + + LG G CG V AF +T + VA++ + KRKF + +N+ E++ L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 55 RKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
+KLNHP IIK+K + + + + E ME E + + QML +
Sbjct: 209 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
++H NG HRDLKPEN+L+++ ++KI DFG ++ L T Y APEVL
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 327
Query: 171 LQ--SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
+ ++ Y+ A+D W++G IL C+ G P ++ +
Sbjct: 328 VSVGTAGYNRAVDCWSLGVIL---------------------FICLSGYPPFSEHRTQVS 366
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVE 286
+ I+ +P ++ S +A+DL+ +L DP R T ++AL+HP+ E
Sbjct: 367 LKDQITSGKYNFIP----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 420
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 39/298 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFW-----EECMNLR-EVKAL 54
+ Y + + LG G CG V AF +T + VA++ + KRKF + +N+ E++ L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 55 RKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
+KLNHP IIK+K + + + + E ME E + + QML +
Sbjct: 195 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
++H NG HRDLKPEN+L+++ ++KI DFG ++ L T Y APEVL
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL 313
Query: 171 LQ--SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
+ ++ Y+ A+D W++G IL C+ G P ++ +
Sbjct: 314 VSVGTAGYNRAVDCWSLGVIL---------------------FICLSGYPPFSEHRTQVS 352
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVE 286
+ I+ +P ++ S +A+DL+ +L DP R T ++AL+HP+ E
Sbjct: 353 LKDQITSGKYNFIP----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 147/293 (50%), Gaps = 44/293 (15%)
Query: 2 ERYKILEELGDGTCG----CVYKAFNVE-TYEIVAVKKMK-RKFYFWEECMNLREVKALR 55
+ Y + EELG G CV+K +E +I+ KK+ R F E RE + R
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE-----REARICR 60
Query: 56 KLNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
KL HPNI++L + ++E + + +F+ + L+ + R+ +SE + + Q+L+ +A
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESIA 119
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+ H NG HR+LKPENLL+ + +K+ADFGLA E++ + + T Y +PEV
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV- 178
Query: 171 LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNIS 230
L+ YS +D+WA G IL L P F D + +LY GA D+ + PE
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVGYPPF-WDEDQHRLY-AQIKAGAYDYPS-PE----- 230
Query: 231 RLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ + P EA LI + + +P +R TADQAL+ P+
Sbjct: 231 ------WDTVTP------------EAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL--REVKALRKLNHPN 61
Y+I++ LG+G+ G V A++ T + VA+K + +K + RE+ LR L HP+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
IIKL +V++ +E+ + EY + L+ + +R SE E R F Q++ + + HR+
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 122 FHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAI 180
HRDLKPENLL+ + +KIADFGL+ ++ + Y APEV+ P +
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 188
Query: 181 DMWAVGAIL 189
D+W+ G IL
Sbjct: 189 DVWSCGVIL 197
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 41/289 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHP 60
E Y+ +++LG G G V + T+ A+K +++ L EV L+ L+HP
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 61 NIIKLKEVVRENNELFFIFE-YMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI+KL + + + + E Y L+ + R + F+E + + Q+L G+ ++H++
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKH 155
Query: 120 GYFHRDLKPENLLV----TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDLKPENLL+ + ++KI DFGL+ + E + T +Y APEVL +
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK--K 213
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKV---CCILGAPDWTAFPEATNISRL 232
Y D+W++G IL L P F G ++ + L KV +P+W
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEW------------ 261
Query: 233 ISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
N S A DLI Q+ +D RR +A QAL+HP
Sbjct: 262 -----------------KNVSEGAKDLIKQMLQFDSQRRISAQQALEHP 293
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL--REVKALRKLNHPN 61
Y+I++ LG+G+ G V A++ T + VA+K + +K + RE+ LR L HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
IIKL +V++ +E+ + EY + L+ + +R SE E R F Q++ + + HR+
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 122 FHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAI 180
HRDLKPENLL+ + +KIADFGL+ ++ + Y APEV+ P +
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 184
Query: 181 DMWAVGAIL 189
D+W+ G IL
Sbjct: 185 DVWSCGVIL 193
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL--REVKALRKLNHPN 61
Y+I++ LG+G+ G V A++ T + VA+K + +K + RE+ LR L HP+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
IIKL +V++ +E+ + EY + L+ + +R SE E R F Q++ + + HR+
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 122 FHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAI 180
HRDLKPENLL+ + +KIADFGL+ ++ + Y APEV+ P +
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 193
Query: 181 DMWAVGAIL 189
D+W+ G IL
Sbjct: 194 DVWSCGVIL 202
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL--REVKALRKLNHPN 61
Y+I++ LG+G+ G V A++ T + VA+K + +K + RE+ LR L HP+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
IIKL +V++ +E+ + EY + L+ + +R SE E R F Q++ + + HR+
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 122 FHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAI 180
HRDLKPENLL+ + +KIADFGL+ ++ + Y APEV+ P +
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 194
Query: 181 DMWAVGAIL 189
D+W+ G IL
Sbjct: 195 DVWSCGVIL 203
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 140/301 (46%), Gaps = 52/301 (17%)
Query: 2 ERYKILEELGDGTCG----CVYKAFNVE-TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+RYK LG G+ G C K E ++++ +++K+K ++ LREV+ L++
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK---TDKESLLREVQLLKQ 82
Query: 57 LNHPNIIKLKEVVRENNELFFIFE-YMEHNLYH--IMRERQIPFSEGEIRSFMSQMLQGL 113
L+HPNI+KL E + + + E Y L+ I R+R FSE + + Q+L G+
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVSTRWYRAPEV 169
+MH+N HRDLKPENLL+ + ++I DFGL+ + + + T +Y APEV
Sbjct: 140 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 199
Query: 170 LLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKV---CCILGAPDWTAFPEA 226
L +Y D+W+ G IL L + P F G +E D L KV P W E+
Sbjct: 200 L--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257
Query: 227 TNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVE 286
A DLI ++ ++ P R +A AL H +
Sbjct: 258 -----------------------------AKDLIRKMLTYVPSMRISARDALDHEWIQTY 288
Query: 287 T 287
T
Sbjct: 289 T 289
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 140/301 (46%), Gaps = 52/301 (17%)
Query: 2 ERYKILEELGDGTCG----CVYKAFNVE-TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+RYK LG G+ G C K E ++++ +++K+K ++ LREV+ L++
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK---TDKESLLREVQLLKQ 105
Query: 57 LNHPNIIKLKEVVRENNELFFIFE-YMEHNLYH--IMRERQIPFSEGEIRSFMSQMLQGL 113
L+HPNI+KL E + + + E Y L+ I R+R FSE + + Q+L G+
Sbjct: 106 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGI 162
Query: 114 AHMHRNGYFHRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVSTRWYRAPEV 169
+MH+N HRDLKPENLL+ + ++I DFGL+ + + + T +Y APEV
Sbjct: 163 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 222
Query: 170 LLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKV---CCILGAPDWTAFPEA 226
L +Y D+W+ G IL L + P F G +E D L KV P W E+
Sbjct: 223 L--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 280
Query: 227 TNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVE 286
A DLI ++ ++ P R +A AL H +
Sbjct: 281 -----------------------------AKDLIRKMLTYVPSMRISARDALDHEWIQTY 311
Query: 287 T 287
T
Sbjct: 312 T 312
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 138/299 (46%), Gaps = 48/299 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKLN 58
+RYK LG G+ G V + T + AVK K + K +E + LREV+ L++L+
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL-LREVQLLKQLD 108
Query: 59 HPNIIKLKEVVRENNELFFIFE-YMEHNLYH--IMRERQIPFSEGEIRSFMSQMLQGLAH 115
HPNI+KL E + + + E Y L+ I R+R FSE + + Q+L G+ +
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITY 165
Query: 116 MHRNGYFHRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
MH+N HRDLKPENLL+ + ++I DFGL+ + + + T +Y APEVL
Sbjct: 166 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL- 224
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKV---CCILGAPDWTAFPEATN 228
+Y D+W+ G IL L + P F G +E D L KV P W E+
Sbjct: 225 -HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES-- 281
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
A DLI ++ ++ P R +A AL H + T
Sbjct: 282 ---------------------------AKDLIRKMLTYVPSMRISARDALDHEWIQTYT 313
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 156/294 (53%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E VAVK +K + ++ ++ LR PNII
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKK-KIKREIKILENLR--GGPNII 95
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+L+ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 153 MHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 270
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 271 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 140/301 (46%), Gaps = 52/301 (17%)
Query: 2 ERYKILEELGDGTCG----CVYKAFNVE-TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+RYK LG G+ G C K E ++++ +++K+K ++ LREV+ L++
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK---TDKESLLREVQLLKQ 88
Query: 57 LNHPNIIKLKEVVRENNELFFIFE-YMEHNLYH--IMRERQIPFSEGEIRSFMSQMLQGL 113
L+HPNI+KL E + + + E Y L+ I R+R FSE + + Q+L G+
Sbjct: 89 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGI 145
Query: 114 AHMHRNGYFHRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVSTRWYRAPEV 169
+MH+N HRDLKPENLL+ + ++I DFGL+ + + + T +Y APEV
Sbjct: 146 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 205
Query: 170 LLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKV---CCILGAPDWTAFPEA 226
L +Y D+W+ G IL L + P F G +E D L KV P W E+
Sbjct: 206 L--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 263
Query: 227 TNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVE 286
A DLI ++ ++ P R +A AL H +
Sbjct: 264 -----------------------------AKDLIRKMLTYVPSMRISARDALDHEWIQTY 294
Query: 287 T 287
T
Sbjct: 295 T 295
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 144/298 (48%), Gaps = 35/298 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++ EELG G V + V + A K + K + L RE + R L HPNI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 63 IKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
++L + + E + IF+ + L+ + R+ +SE + + Q+L+ + H H+ G
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCHQMGV 142
Query: 122 FHRDLKPENLLVTNDV----LKIADFGLAREL-SSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRDLKPENLL+ + + +K+ADFGLA E+ + + T Y +PEV L+ Y
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV-LRKDPY 201
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+WA G IL L P F D + +LY+ GA D FP S
Sbjct: 202 GKPVDLWACGVILYILLVGYPPF-WDEDQHRLYQQ-IKAGAYD---FP---------SPE 247
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLH 294
+ + P EA DLI ++ + +P +R TA +AL+HP+ + + V +H
Sbjct: 248 WDTVTP------------EAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMH 293
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 156/294 (53%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 95
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + +R+ ++ +IR +M ++L+ L + H G
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQLRQ---TLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 270
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 271 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 42/292 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLNH 59
+RY+ +++LG G G V + T A+K +K+ L EV L++L+H
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 60 PNIIKLKEVVRENNELFFIFE-YMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
PNI+KL E + + + E Y L+ + RQ FSE + M Q+L G ++H+
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ-KFSEVDAAVIMKQVLSGTTYLHK 139
Query: 119 NGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSS 174
+ HRDLKPENLL+ + ++KI DFGL+ E + T +Y APEVL
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--RK 197
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKV---CCILGAPDWTAFPEATNISR 231
Y D+W+ G IL L P F G ++ + L +V PDWT
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWT---------- 247
Query: 232 LISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
S EA L+ + +++P +R +A++AL HP+
Sbjct: 248 -------------------QVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 155/298 (52%), Gaps = 30/298 (10%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR NII
Sbjct: 45 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKK-KIKREVKILENLR--GGTNII 101
Query: 64 KLKEVVRE--NNELFFIFEYMEHN----LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
KL + V++ + +FEY+ + LY I+ ++ +IR +M ++L+ L + H
Sbjct: 102 KLIDTVKDPVSKTPALVFEYINNTDFKQLYQIL-------TDFDIRFYMYELLKALDYCH 154
Query: 118 RNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ + L++ D+GLA Y V++R+++ PE+L+
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 214
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
Y ++DMW++G +LA + F P F G DQL ++ +LG + + + +I +
Sbjct: 215 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHID--LD 272
Query: 235 ISYSEILPINLSDIIPN---------ASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+++IL + N S EA+DL+ +L +D +R TA +A++HP+F
Sbjct: 273 PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 155/298 (52%), Gaps = 30/298 (10%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR NII
Sbjct: 40 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKK-KIKREVKILENLR--GGTNII 96
Query: 64 KLKEVVRE--NNELFFIFEYMEHN----LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
KL + V++ + +FEY+ + LY I+ ++ +IR +M ++L+ L + H
Sbjct: 97 KLIDTVKDPVSKTPALVFEYINNTDFKQLYQIL-------TDFDIRFYMYELLKALDYCH 149
Query: 118 RNGYFHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ + L++ D+GLA Y V++R+++ PE+L+
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 209
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
Y ++DMW++G +LA + F P F G DQL ++ +LG + + + +I +
Sbjct: 210 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHID--LD 267
Query: 235 ISYSEILPINLSDIIPN---------ASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+++IL + N S EA+DL+ +L +D +R TA +A++HP+F
Sbjct: 268 PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 133/290 (45%), Gaps = 42/290 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLNH 59
+RY+ +++LG G G V + T A+K +K+ L EV L++L+H
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 60 PNIIKLKEVVRENNELFFIFE-YMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
PNI+KL E + + + E Y L+ + RQ FSE + M Q+L G ++H+
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ-KFSEVDAAVIMKQVLSGTTYLHK 122
Query: 119 NGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSS 174
+ HRDLKPENLL+ + ++KI DFGL+ E + T +Y APEVL
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--RK 180
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKV---CCILGAPDWTAFPEATNISR 231
Y D+W+ G IL L P F G ++ + L +V PDWT
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWT---------- 230
Query: 232 LISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
S EA L+ + +++P +R +A++AL HP
Sbjct: 231 -------------------QVSDEAKQLVKLMLTYEPSKRISAEEALNHP 261
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 136/302 (45%), Gaps = 49/302 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK---RKFYFWEECMNLRE-----VKA 53
E Y+ E LG G V + + T + AVK + + EE LRE V
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 54 LRKLN-HPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQ 111
LRK++ HPNII+LK+ N F +F+ M+ L+ + E+ + SE E R M +L+
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLE 122
Query: 112 GLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+ +H+ HRDLKPEN+L+ +D+ +K+ DFG + +L E T Y APE++
Sbjct: 123 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 182
Query: 171 LQSSS-----YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCC---ILGAPDWTA 222
S + Y +DMW+ G I+ L SP F ++ L + G+P+W
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 242
Query: 223 FPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
+ + DL+ + P +R TA++AL HPF
Sbjct: 243 YSDTVK-----------------------------DLVSRFLVVQPQKRYTAEEALAHPF 273
Query: 283 FN 284
F
Sbjct: 274 FQ 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 136/302 (45%), Gaps = 49/302 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK---RKFYFWEECMNLRE-----VKA 53
E Y+ E LG G V + + T + AVK + + EE LRE V
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 54 LRKLN-HPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQ 111
LRK++ HPNII+LK+ N F +F+ M+ L+ + E+ + SE E R M +L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLE 135
Query: 112 GLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+ +H+ HRDLKPEN+L+ +D+ +K+ DFG + +L E T Y APE++
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 195
Query: 171 LQSSS-----YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCC---ILGAPDWTA 222
S + Y +DMW+ G I+ L SP F ++ L + G+P+W
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 255
Query: 223 FPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
+ + DL+ + P +R TA++AL HPF
Sbjct: 256 YSDTVK-----------------------------DLVSRFLVVQPQKRYTAEEALAHPF 286
Query: 283 FN 284
F
Sbjct: 287 FQ 288
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 143/298 (47%), Gaps = 35/298 (11%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++ EELG G V + + A K + K + L RE + R L HPNI
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 92
Query: 63 IKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
++L + + E + +F+ + L+ + R+ +SE + + Q+L+ + H+H++
Sbjct: 93 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-YSEADASHCIHQILESVNHIHQHDI 151
Query: 122 FHRDLKPENLLVTND----VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSSY 176
HRDLKPENLL+ + +K+ADFGLA E+ + + T Y +PEV L+ Y
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV-LRKDPY 210
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+WA G IL L P F D + +LY+ GA D FP S
Sbjct: 211 GKPVDIWACGVILYILLVGYPPF-WDEDQHKLYQQ-IKAGAYD---FP---------SPE 256
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLH 294
+ + P EA +LI Q+ + +P +R TADQAL+HP+ + V +H
Sbjct: 257 WDTVTP------------EAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMH 302
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 12/213 (5%)
Query: 7 LEELGDGTCGCVYKAFNVETYEIVAVKKM----KRKFYFWEECMNLREVKALRKLNHPNI 62
L E+G G+ G VY A +V E+VA+KKM K+ W++ ++EV+ L+KL HPN
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI--IKEVRFLQKLRHPNT 116
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
I+ + + + + EY + ++ + P E EI + LQGLA++H +
Sbjct: 117 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 123 HRDLKPENLLVTN-DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL--QSSSYSPA 179
HRD+K N+L++ ++K+ DFG A S M P +V T ++ APEV+L Y
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSA---SIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 233
Query: 180 IDMWAVGAILAELFTLSPIFPGDSEIDQLYKVC 212
+D+W++G EL P + + LY +
Sbjct: 234 VDVWSLGITCIELAERKPPLFNMNAMSALYHIA 266
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 123/236 (52%), Gaps = 15/236 (6%)
Query: 60 PNIIKLKEVVRENNELF--FIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNI+KL ++VR+ + IFEY+ + + ++ ++ +IR ++ ++L+ L + H
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP---TLTDYDIRYYIYELLKALDYCH 163
Query: 118 RNGYFHRDLKPENLLVTNDV--LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ +++ L++ D+GLA Y V++R+++ PE+L+
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 223
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI----- 229
Y ++DMW++G + A + F P F G DQL K+ +LG A+ I
Sbjct: 224 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQ 283
Query: 230 --SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ + S L +D S EAID + +L +D R TA +A+ HP+F
Sbjct: 284 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 339
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ Y I EELG G G V++ T A K + +E + +E++ + L HP
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR-KEIQTMSVLRHP 214
Query: 61 NIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
++ L + ++NE+ I+E+M L+ + + SE E +M Q+ +GL HMH N
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 120 GYFHRDLKPENLLVT---NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
Y H DLKPEN++ T ++ LK+ DFGL L T + APEV +
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV-AEGKPV 333
Query: 177 SPAIDMWAVGAILAELFT-LSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
DMW+VG + L + LSP F G+++ + L V DW
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSP-FGGENDDETLRNVKSC----DW--------------- 373
Query: 236 SYSEILPINLSD-IIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
N+ D S + D I +L DP R T QAL+HP+
Sbjct: 374 --------NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 12/213 (5%)
Query: 7 LEELGDGTCGCVYKAFNVETYEIVAVKKM----KRKFYFWEECMNLREVKALRKLNHPNI 62
L E+G G+ G VY A +V E+VA+KKM K+ W++ ++EV+ L+KL HPN
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI--IKEVRFLQKLRHPNT 77
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
I+ + + + + EY + ++ + P E EI + LQGLA++H +
Sbjct: 78 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 123 HRDLKPENLLVTN-DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL--QSSSYSPA 179
HRD+K N+L++ ++K+ DFG A S M P +V T ++ APEV+L Y
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSA---SIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 180 IDMWAVGAILAELFTLSPIFPGDSEIDQLYKVC 212
+D+W++G EL P + + LY +
Sbjct: 195 VDVWSLGITCIELAERKPPLFNMNAMSALYHIA 227
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ Y I EELG G G V++ T A K + +E + +E++ + L HP
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR-KEIQTMSVLRHP 108
Query: 61 NIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
++ L + ++NE+ I+E+M L+ + + SE E +M Q+ +GL HMH N
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 120 GYFHRDLKPENLLVT---NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
Y H DLKPEN++ T ++ LK+ DFGL L T + APEV +
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV-AEGKPV 227
Query: 177 SPAIDMWAVGAILAELFT-LSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
DMW+VG + L + LSP F G+++ + L V DW
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSP-FGGENDDETLRNVKSC----DW--------------- 267
Query: 236 SYSEILPINLSD-IIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
N+ D S + D I +L DP R T QAL+HP+
Sbjct: 268 --------NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 95
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 270
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 271 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 137/301 (45%), Gaps = 52/301 (17%)
Query: 2 ERYKILEELGDGTCG----CVYKAFNVE-TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+RYK LG G+ G C K E ++++ +++K+K ++ LREV+ L++
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK---TDKESLLREVQLLKQ 82
Query: 57 LNHPNIIKLKEVVRENNELFFIFE-YMEHNLYH--IMRERQIPFSEGEIRSFMSQMLQGL 113
L+HPNI KL E + + + E Y L+ I R+R FSE + + Q+L G+
Sbjct: 83 LDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGI 139
Query: 114 AHMHRNGYFHRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVSTRWYRAPEV 169
+ H+N HRDLKPENLL+ + ++I DFGL+ + + + T +Y APEV
Sbjct: 140 TYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEV 199
Query: 170 LLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKV---CCILGAPDWTAFPEA 226
L +Y D+W+ G IL L + P F G +E D L KV P W E+
Sbjct: 200 L--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 257
Query: 227 TNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVE 286
A DLI + ++ P R +A AL H +
Sbjct: 258 -----------------------------AKDLIRKXLTYVPSXRISARDALDHEWIQTY 288
Query: 287 T 287
T
Sbjct: 289 T 289
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 95
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 270
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 271 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 95
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 270
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 271 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 94
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 95 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 151
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 152 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 211
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 212 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 269
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 270 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 44 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 100
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 101 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 157
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 158 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 217
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 218 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 275
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 276 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 95
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 270
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 271 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 95
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 270
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 271 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 95
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 270
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 271 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 95
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 270
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 271 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 95
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 270
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 271 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 94
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 95 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 151
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 152 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 211
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 212 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 269
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 270 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 144/300 (48%), Gaps = 35/300 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHP 60
E Y++ EELG G V + V + A + K + L RE + R L HP
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 61 NIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI++L + + E + IF+ + L+ + R+ +SE + + Q+L+ + H H+
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCHQM 129
Query: 120 GYFHRDLKPENLLVTNDV----LKIADFGLAREL-SSMPPYTEYVSTRWYRAPEVLLQSS 174
G HR+LKPENLL+ + + +K+ADFGLA E+ + + T Y +PEV L+
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV-LRKD 188
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
Y +D+WA G IL L P F D + +LY+ GA D FP S
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPF-WDEDQHRLYQQ-IKAGAYD---FP---------S 234
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLH 294
+ + P EA DLI ++ + +P +R TA +AL+HP+ + + V +H
Sbjct: 235 PEWDTVTP------------EAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMH 282
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 155/294 (52%), Gaps = 22/294 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y+++ +LG G V++A N+ E V VK +K + ++ ++ LR PNII
Sbjct: 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KIKREIKILENLR--GGPNII 93
Query: 64 KLKEVVRE--NNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
L ++V++ + +FE++ + + + + ++ +IR +M ++L+ L + H G
Sbjct: 94 TLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGI 150
Query: 122 FHRDLKPENLLVTND--VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+KP N+++ ++ L++ D+GLA Y V++R+++ PE+L+ Y +
Sbjct: 151 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 210
Query: 180 IDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+DMW++G +LA + F P F G DQL ++ +LG D + + NI + ++
Sbjct: 211 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE--LDPRFN 268
Query: 239 EILPIN---------LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+IL + S+ S EA+D + +L +D R TA +A++HP+F
Sbjct: 269 DILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 135/302 (44%), Gaps = 49/302 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK---RKFYFWEECMNLRE-----VKA 53
E Y+ E LG G V + + T + AVK + + EE LRE V
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 54 LRKLN-HPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQ 111
LRK++ HPNII+LK+ N F +F+ M+ L+ + E+ + SE E R M +L+
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLE 135
Query: 112 GLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+ +H+ HRDLKPEN+L+ +D+ +K+ DFG + +L T Y APE++
Sbjct: 136 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEII 195
Query: 171 LQSSS-----YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCC---ILGAPDWTA 222
S + Y +DMW+ G I+ L SP F ++ L + G+P+W
Sbjct: 196 ECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD 255
Query: 223 FPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
+ + DL+ + P +R TA++AL HPF
Sbjct: 256 YSDTVK-----------------------------DLVSRFLVVQPQKRYTAEEALAHPF 286
Query: 283 FN 284
F
Sbjct: 287 FQ 288
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Query: 60 PNIIKLKEVVRENNELF--FIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNI+KL ++VR+ + IFEY+ + + ++ ++ +IR ++ ++L+ L + H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP---TLTDYDIRYYIYELLKALDYCH 142
Query: 118 RNGYFHRDLKPENLLVTNDV--LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ +++ L++ D+GLA Y V++R+++ PE+L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI----- 229
Y ++DMW++G + A + F P F G DQL K+ +LG + I
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 230 --SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ + S L +D S EAID + +L +D R TA +A+ HP+F
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Query: 60 PNIIKLKEVVRENNELF--FIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNI+KL ++VR+ + IFEY+ + + ++ ++ +IR ++ ++L+ L + H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP---TLTDYDIRYYIYELLKALDYCH 142
Query: 118 RNGYFHRDLKPENLLVTNDV--LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ +++ L++ D+GLA Y V++R+++ PE+L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI----- 229
Y ++DMW++G + A + F P F G DQL K+ +LG + I
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 230 --SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ + S L +D S EAID + +L +D R TA +A+ HP+F
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Query: 60 PNIIKLKEVVRENNELF--FIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNI+KL ++VR+ + IFEY+ + + ++ ++ +IR ++ ++L+ L + H
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP---TLTDYDIRYYIYELLKALDYCH 144
Query: 118 RNGYFHRDLKPENLLVTNDV--LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ +++ L++ D+GLA Y V++R+++ PE+L+
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 204
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI----- 229
Y ++DMW++G + A + F P F G DQL K+ +LG + I
Sbjct: 205 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 264
Query: 230 --SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ + S L +D S EAID + +L +D R TA +A+ HP+F
Sbjct: 265 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Query: 60 PNIIKLKEVVRENNELF--FIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNI+KL ++VR+ + IFEY+ + + ++ ++ +IR ++ ++L+ L + H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP---TLTDYDIRYYIYELLKALDYCH 143
Query: 118 RNGYFHRDLKPENLLVTNDV--LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ +++ L++ D+GLA Y V++R+++ PE+L+
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI----- 229
Y ++DMW++G + A + F P F G DQL K+ +LG + I
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 263
Query: 230 --SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ + S L +D S EAID + +L +D R TA +A+ HP+F
Sbjct: 264 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 319
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Query: 60 PNIIKLKEVVRENNELF--FIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNI+KL ++VR+ + IFEY+ + + ++ ++ +IR ++ ++L+ L + H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP---TLTDYDIRYYIYELLKALDYCH 142
Query: 118 RNGYFHRDLKPENLLVTNDV--LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ +++ L++ D+GLA Y V++R+++ PE+L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI----- 229
Y ++DMW++G + A + F P F G DQL K+ +LG + I
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 230 --SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ + S L +D S EAID + +L +D R TA +A+ HP+F
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Query: 60 PNIIKLKEVVRENNELF--FIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNI+KL ++VR+ + IFEY+ + + ++ ++ +IR ++ ++L+ L + H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP---TLTDYDIRYYIYELLKALDYCH 142
Query: 118 RNGYFHRDLKPENLLVTNDV--LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ +++ L++ D+GLA Y V++R+++ PE+L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI----- 229
Y ++DMW++G + A + F P F G DQL K+ +LG + I
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 230 --SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ + S L +D S EAID + +L +D R TA +A+ HP+F
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Query: 60 PNIIKLKEVVRENNELF--FIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNI+KL ++VR+ + IFEY+ + + ++ ++ +IR ++ ++L+ L + H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP---TLTDYDIRYYIYELLKALDYCH 142
Query: 118 RNGYFHRDLKPENLLVTNDV--LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ +++ L++ D+GLA Y V++R+++ PE+L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI----- 229
Y ++DMW++G + A + F P F G DQL K+ +LG + I
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 230 --SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ + S L +D S EAID + +L +D R TA +A+ HP+F
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Query: 60 PNIIKLKEVVRENNELF--FIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNI+KL ++VR+ + IFEY+ + + ++ ++ +IR ++ ++L+ L + H
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP---TLTDYDIRYYIYELLKALDYCH 142
Query: 118 RNGYFHRDLKPENLLVTNDV--LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ +++ L++ D+GLA Y V++R+++ PE+L+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI----- 229
Y ++DMW++G + A + F P F G DQL K+ +LG + I
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 230 --SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ + S L +D S EAID + +L +D R TA +A+ HP+F
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 15/236 (6%)
Query: 60 PNIIKLKEVVRENNELF--FIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNI+KL ++VR+ + IFEY+ + + ++ ++ +IR ++ ++L+ L + H
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP---TLTDYDIRYYIYELLKALDYCH 143
Query: 118 RNGYFHRDLKPENLLVTNDV--LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRD+KP N+++ +++ L++ D+GLA Y V++R+++ PE+L+
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 176 YSPAIDMWAVGAILAEL-FTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI----- 229
Y ++DMW++G + A + F P F G DQL K+ +LG + I
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 263
Query: 230 --SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ + S L +D S EAID + +L +D R TA +A+ HP+F
Sbjct: 264 LEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 319
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 140/289 (48%), Gaps = 42/289 (14%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR---EVKALRKLNHP 60
Y I E LG+G+ G V A + +T + VA+K + R+ + M++R E+ L+ L HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQL-LKKSDMHMRVEREISYLKLLRHP 69
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
+IIKL +V+ ++ + EY L+ + E++ +E E R F Q++ + + HR+
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 121 YFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRDLKPENLL+ +++ +KIADFGL+ ++ + Y APEV+ P
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPE 188
Query: 180 IDMWAVGAILAELFTLSPIFPGDSE-IDQLYKVC--CILGAPDWTAFPEATNISRLISIS 236
+D+W+ G +L L P D E I L+K C+ PD+ +
Sbjct: 189 VDVWSCGIVL--YVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLS-------------- 232
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
P A LI ++ DP++R T + + P+FNV
Sbjct: 233 -------------PGAQ----SLIRRMIVADPMQRITIQEIRRDPWFNV 264
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 136/301 (45%), Gaps = 50/301 (16%)
Query: 2 ERYKILEELGDGTCG----CVYKA----FNVETYEIVAVKKMKRKFYFWEECMNLREVKA 53
++Y + +G G CV++A F V+ E+ A + + E RE
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR-RETHI 152
Query: 54 LRKL-NHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQ 111
LR++ HP+II L + ++ +F +F+ M L+ + E+ + SE E RS M +L+
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLE 211
Query: 112 GLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
++ +H N HRDLKPEN+L+ +++ ++++DFG + L E T Y APE+L
Sbjct: 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEIL 271
Query: 171 LQS-----SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVC---CILGAPDWTA 222
S Y +D+WA G IL L SP F +I L + +P+W
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWD- 330
Query: 223 FPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
+ S DLI +L DP R TA+QALQHPF
Sbjct: 331 ----------------------------DRSSTVKDLISRLLQVDPEARLTAEQALQHPF 362
Query: 283 F 283
F
Sbjct: 363 F 363
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 137/295 (46%), Gaps = 37/295 (12%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHPNI 62
++I+ ELGDG G VYKA N ET + A K + K EE + + E+ L +HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNI 96
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYH-IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
+KL + N L+ + E+ +M E + P +E +I+ Q L L ++H N
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 122 FHRDLKPENLLVTNDV-LKIADFGL-ARELSSMPPYTEYVSTRWYRAPEVLLQSSS---- 175
HRDLK N+L T D +K+ADFG+ A+ ++ ++ T ++ APEV++ +S
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
Y D+W++G L E+ + P + + L K+ P A P SR S
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA--KSEPPTLAQP-----SRWSS- 268
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
N D + + +D W T Q LQHPF V++ P
Sbjct: 269 --------NFKDFLKKCLEKNVDARW-----------TTSQLLQHPFVTVDSNKP 304
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 140/284 (49%), Gaps = 34/284 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E + +LE+LG+G+ G VYKA + ET +IVA+K++ + E ++E+ +++ + P+
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE---IIKEISIMQQCDSPH 85
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
++K +N +L+ + EY ++ I+R R +E EI + + L+GL ++H
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 121 YFHRDLKPENLLV-TNDVLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+K N+L+ T K+ADFG+A +L+ M + T ++ APEV +Q Y+
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEV-IQEIGYNC 204
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
D+W++G E+ P + ++I + + I P P L S +++
Sbjct: 205 VADIWSLGITAIEMAEGKPPY---ADIHPMRAIFMIPTNP-----PPTFRKPELWSDNFT 256
Query: 239 EILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
D + Q P +R TA Q LQHPF
Sbjct: 257 -------------------DFVKQCLVKSPEQRATATQLLQHPF 281
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 143/300 (47%), Gaps = 35/300 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHP 60
+ Y++ E++G G V + + T A K + K + L RE + R L H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 61 NIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI++L + + E + +F+ + L+ + R+ +SE + + Q+L+ + H H+
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCHQM 122
Query: 120 GYFHRDLKPENLLVTND----VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSS 174
G HRDLKPENLL+ + +K+ADFGLA E+ + + T Y +PEV L+
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV-LRKE 181
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
+Y +D+WA G IL L P F D + +LY+ GA D FP S
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPF-WDEDQHKLYQQ-IKAGAYD---FP---------S 227
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLH 294
+ + P EA +LI Q+ + +P +R TA +AL+HP+ + V +H
Sbjct: 228 PEWDTVTP------------EAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMH 275
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 145/314 (46%), Gaps = 41/314 (13%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
++ E LG G V A T ++ AVK + +K +E E+ LRK+ H NI+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 64 KLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L+++ N L+ + + + L+ + E+ ++E + + + Q+L + ++HR G
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF-YTEKDASTLIRQVLDAVYYLHRMGIV 142
Query: 123 HRDLKPENLLVTN----DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRDLKPENLL + + I+DFGL++ + T Y APEVL Q YS
Sbjct: 143 HRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQ-KPYSK 201
Query: 179 AIDMWAVGAILAELFTLSPIF--PGDSEI-DQLYKVCCILGAPDWTAFPEATNISRLISI 235
A+D W++G I L P F DS++ +Q+ K +P W
Sbjct: 202 AVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWD-------------- 247
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLHD 295
++SD A D I L DP +R T +QA +HP+ +T + +H+
Sbjct: 248 --------DISD-------SAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIHE 292
Query: 296 PL--ELRLNNMGSK 307
+ ++R N SK
Sbjct: 293 SVSAQIRKNFAKSK 306
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 141/320 (44%), Gaps = 44/320 (13%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + LG G V A + T ++VA+K + +K +E E+ L K+ HPNI+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 64 KLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L ++ L+ I + + L+ + E+ ++E + + Q+L + ++H G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 123 HRDLKPENLLV----TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRDLKPENLL + + I+DFGL++ + T Y APEVL Q YS
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-YSK 197
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSE---IDQLYKVCCILGAPDWTAFPEATNISRLISI 235
A+D W++G I L P F +++ +Q+ K +P W
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD-------------- 243
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLHD 295
++SD A D I L DP +R T +QALQHP+ +T + +H
Sbjct: 244 --------DISD-------SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQ 288
Query: 296 PLELRLNNMGSKPNLELNLW 315
+ ++ K N + W
Sbjct: 289 SVSEQI-----KKNFAKSKW 303
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 37/295 (12%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHPNI 62
++I+ ELGDG G VYKA N ET + A K + K EE + + E+ L +HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNI 96
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYH-IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
+KL + N L+ + E+ +M E + P +E +I+ Q L L ++H N
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 122 FHRDLKPENLLVTNDV-LKIADFGL-ARELSSMPPYTEYVSTRWYRAPEVLLQSSS---- 175
HRDLK N+L T D +K+ADFG+ A+ + ++ T ++ APEV++ +S
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
Y D+W++G L E+ + P + + L K+ P A P SR S
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA--KSEPPTLAQP-----SRWSS- 268
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
N D + + +D W T Q LQHPF V++ P
Sbjct: 269 --------NFKDFLKKCLEKNVDARW-----------TTSQLLQHPFVTVDSNKP 304
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 37/295 (12%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHPNI 62
++I+ ELGDG G VYKA N ET + A K + K EE + + E+ L +HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNI 96
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYH-IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
+KL + N L+ + E+ +M E + P +E +I+ Q L L ++H N
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 122 FHRDLKPENLLVTNDV-LKIADFGL-ARELSSMPPYTEYVSTRWYRAPEVLLQSSS---- 175
HRDLK N+L T D +K+ADFG+ A+ + ++ T ++ APEV++ +S
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
Y D+W++G L E+ + P + + L K+ P A P SR S
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA--KSEPPTLAQP-----SRWSS- 268
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
N D + + +D W T Q LQHPF V++ P
Sbjct: 269 --------NFKDFLKKCLEKNVDARW-----------TTSQLLQHPFVTVDSNKP 304
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 134/287 (46%), Gaps = 35/287 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK-RKFYFWEECMNLREVKALRKLNH 59
ME+Y L+++G+G+ G + E +K++ + E + REV L + H
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNI++ +E EN L+ + +Y E I ++ + F E +I + Q+ L H+H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 118 RNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEY-VSTRWYRAPEVLLQSSS 175
HRD+K +N+ +T D +++ DFG+AR L+S + T +Y +PE+ ++
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI-CENKP 201
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
Y+ D+WA+G +L EL TL F S + + K+ +FP
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS-------GSFP----------- 243
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
P++L + S + L+ QL +P RP+ + L+ F
Sbjct: 244 ------PVSL-----HYSYDLRSLVSQLFKRNPRDRPSVNSILEKGF 279
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 137/287 (47%), Gaps = 34/287 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
++Y E++G G G VY A +V T + VA+++M + +E + + E+ +R+ +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPN 78
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
I+ + +EL+ + EY+ +L ++ E EG+I + + LQ L +H N
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 121 YFHRDLKPENLLVTND-VLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+K +N+L+ D +K+ DFG +++ +E V T ++ APEV+ + +Y P
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR-KAYGP 195
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+D+W++G + E+ P + ++ + LY + PE N +L +I
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-------NGTPELQNPEKLSAIFR- 247
Query: 239 EILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
D + + D +R +A + LQH F +
Sbjct: 248 -------------------DFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 134/299 (44%), Gaps = 39/299 (13%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + LG G V A + T ++VA+K + ++ +E E+ L K+ HPNI+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 64 KLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L ++ L+ I + + L+ + E+ ++E + + Q+L + ++H G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 123 HRDLKPENLLV----TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRDLKPENLL + + I+DFGL++ + T Y APEVL Q YS
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-YSK 197
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSE---IDQLYKVCCILGAPDWTAFPEATNISRLISI 235
A+D W++G I L P F +++ +Q+ K +P W
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD-------------- 243
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLH 294
++SD A D I L DP +R T +QALQHP+ +T + +H
Sbjct: 244 --------DISD-------SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIH 287
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y ILEELG G G V++ T + V K Y ++ E+ + +L+HP +I
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVF-VAKFINTPYPLDKYTVKNEISIMNQLHHPKLI 111
Query: 64 KLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + + E+ I E++ L+ + SE E+ ++M Q +GL HMH +
Sbjct: 112 NLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV 171
Query: 123 HRDLKPENLLVTN---DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
H D+KPEN++ +KI DFGLA +L+ +T + APE+ +
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI-VDREPVGFY 230
Query: 180 IDMWAVGAILAELFT-LSPIFPGDSEIDQLYKVC-CILGAPDWTAFPEATNISRLISISY 237
DMWA+G + L + LSP F G+ +++ L V C DW F E
Sbjct: 231 TDMWAIGVLGYVLLSGLSP-FAGEDDLETLQNVKRC-----DWE-FDE------------ 271
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
D + S EA D I L +P +R T AL+HP+
Sbjct: 272 ---------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 141/314 (44%), Gaps = 41/314 (13%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + LG G V A + T ++VA+K + ++ +E E+ L K+ HPNI+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 64 KLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L ++ L+ I + + L+ + E+ ++E + + Q+L + ++H G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 123 HRDLKPENLLV----TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRDLKPENLL + + I+DFGL++ + T Y APEVL Q YS
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-YSK 197
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSE---IDQLYKVCCILGAPDWTAFPEATNISRLISI 235
A+D W++G I L P F +++ +Q+ K +P W
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD-------------- 243
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLHD 295
++SD A D I L DP +R T +QALQHP+ +T + +H
Sbjct: 244 --------DISD-------SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQ 288
Query: 296 PL--ELRLNNMGSK 307
+ +++ N SK
Sbjct: 289 SVSEQIKKNFAKSK 302
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 141/314 (44%), Gaps = 41/314 (13%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
Y + LG G V A + T ++VA+K + ++ +E E+ L K+ HPNI+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 64 KLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L ++ L+ I + + L+ + E+ ++E + + Q+L + ++H G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 123 HRDLKPENLLV----TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRDLKPENLL + + I+DFGL++ + T Y APEVL Q YS
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-YSK 197
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSE---IDQLYKVCCILGAPDWTAFPEATNISRLISI 235
A+D W++G I L P F +++ +Q+ K +P W
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD-------------- 243
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLHD 295
++SD A D I L DP +R T +QALQHP+ +T + +H
Sbjct: 244 --------DISD-------SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQ 288
Query: 296 PL--ELRLNNMGSK 307
+ +++ N SK
Sbjct: 289 SVSEQIKKNFAKSK 302
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 113/252 (44%), Gaps = 55/252 (21%)
Query: 50 EVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHN--LYHIM--RERQIPFSEGEIRSF 105
E++ L+ L+HPNIIK+ EV + + ++ + E E L I+ + R SEG +
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVST 161
M QM+ LA+ H H+DLKPEN+L + +KI DFGLA S T T
Sbjct: 130 MKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGT 189
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGAPD 219
Y APEV + ++ D+W+ G ++ L T F G S E+ Q
Sbjct: 190 ALYMAPEVFKRDVTFK--CDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ------------ 235
Query: 220 WTAFPEATNISRLISISYSEILPINLSDIIPNASME-------AIDLIWQLCSWDPLRRP 272
+Y E PN ++E A+DL+ Q+ + DP RRP
Sbjct: 236 --------------KATYKE----------PNYAVECRPLTPQAVDLLKQMLTKDPERRP 271
Query: 273 TADQALQHPFFN 284
+A Q L H +F
Sbjct: 272 SAAQVLHHEWFK 283
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 149/327 (45%), Gaps = 51/327 (15%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETY-EIVAVKKMKRKFYFWEECMNLREVKALRKLN--H 59
RY+I++ LG+G G V + + + VAVK +K + E + E++ L LN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS--EIQVLEHLNTTD 72
Query: 60 PN----IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ-IPFSEGEIRSFMSQMLQGLA 114
PN +++ E + + +FE + + Y ++E +PF IR Q+ + +
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 115 HMHRNGYFHRDLKPENLL--------------------VTNDVLKIADFGLARELSSMPP 154
+H N H DLKPEN+L + N +K+ DFG A
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--TYDDEH 190
Query: 155 YTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
++ VSTR YRAPEV+L + +S D+W++G IL E + +FP + L + I
Sbjct: 191 HSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 215 LG----------------APDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAID 258
LG D + E ++ R +S + + LS + + + D
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL--FD 307
Query: 259 LIWQLCSWDPLRRPTADQALQHPFFNV 285
LI ++ +DP +R T +AL+HPFF++
Sbjct: 308 LIQKMLEYDPAKRITLREALKHPFFDL 334
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 136/287 (47%), Gaps = 34/287 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
++Y E++G G G VY A +V T + VA+++M + +E + + E+ +R+ +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPN 78
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
I+ + +EL+ + EY+ +L ++ E EG+I + + LQ L +H N
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 121 YFHRDLKPENLLVTND-VLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+K +N+L+ D +K+ DFG +++ + V T ++ APEV+ + +Y P
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-KAYGP 195
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+D+W++G + E+ P + ++ + LY + PE N +L +I
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-------NGTPELQNPEKLSAIFR- 247
Query: 239 EILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
D + + D +R +A + LQH F +
Sbjct: 248 -------------------DFLNRCLEMDVEKRGSAKELLQHQFLKI 275
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 136/287 (47%), Gaps = 34/287 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
++Y E++G G G VY A +V T + VA+++M + +E + + E+ +R+ +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPN 78
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
I+ + +EL+ + EY+ +L ++ E EG+I + + LQ L +H N
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 121 YFHRDLKPENLLVTND-VLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+K +N+L+ D +K+ DFG +++ + V T ++ APEV+ + +Y P
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGP 195
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+D+W++G + E+ P + ++ + LY + PE N +L +I
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-------NGTPELQNPEKLSAIFR- 247
Query: 239 EILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
D + + D +R +A + LQH F +
Sbjct: 248 -------------------DFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 36/243 (14%)
Query: 41 FWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSE 99
F EE N E+ L+ L+HPNIIKL +V + + + E+ E L+ + R F E
Sbjct: 89 FHEEIYN--EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDE 145
Query: 100 GEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPY 155
+ + M Q+L G+ ++H++ HRD+KPEN+L+ N +KI DFGL+ S
Sbjct: 146 CDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 156 TEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCIL 215
+ + T +Y APEVL Y+ D+W+ G I+ L P F G ++ D + KV
Sbjct: 206 RDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV---E 260
Query: 216 GAPDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTAD 275
+ F + NIS EA +LI + ++D +R TA+
Sbjct: 261 KGKYYFDFNDWKNISD-----------------------EAKELIKLMLTYDYNKRCTAE 297
Query: 276 QAL 278
+AL
Sbjct: 298 EAL 300
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 4/203 (1%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++L+ +G G V A ++ T + VAV+ + + L REV+ ++ LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
+KL EV+ L+ + EY E E R+ Q++ + + H+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 123 HRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY-SPAI 180
HRDLK ENLL+ D+ +KIADFG + E + E+ + Y APE L Q Y P +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPE-LFQGKKYDGPEV 194
Query: 181 DMWAVGAILAELFTLSPIFPGDS 203
D+W++G IL L + S F G +
Sbjct: 195 DVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 10/206 (4%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++L+ +G G V A ++ T VA+K + + L REV+ ++ LNHPNI
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 63 IKLKEVVRENNELFFIFEYMEHNL---YHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+KL EV+ L+ I EY Y + R E E RS Q++ + + H+
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQK 130
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY-S 177
HRDLK ENLL+ D+ +KIADFG + E + + + Y APE L Q Y
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPE-LFQGKKYDG 189
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDS 203
P +D+W++G IL L + S F G +
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 34/287 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
++Y E++G G G VY A +V T + VA+++M + +E + + E+ +R+ +PN
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPN 79
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
I+ + +EL+ + EY+ +L ++ E EG+I + + LQ L +H N
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 121 YFHRDLKPENLLVTND-VLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+K +N+L+ D +K+ DFG +++ + V T ++ APEV+ + +Y P
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR-KAYGP 196
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+D+W++G + E+ P + ++ + LY + PE N +L +I
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-------NGTPELQNPEKLSAIFR- 248
Query: 239 EILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
D + + D +R +A + +QH F +
Sbjct: 249 -------------------DFLNRCLEMDVEKRGSAKELIQHQFLKI 276
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 127/287 (44%), Gaps = 33/287 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
+RY ++++G G G + T E+VAVK ++R E RE+ R L HPN
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ--REIINHRSLRHPN 77
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
I++ KEV+ L I EY + FSE E R F Q+L G+++ H
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 122 FHRDLKPENLLVTND---VLKIADFGLARE--LSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRDLK EN L+ LKI DFG ++ L S P T V T Y APEVLL+
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQEYD 195
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
D+W+ G L + + F D E + Y+ I R++S+
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFE-DPEEPRDYR----------------KTIQRILSVK 238
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
YS +P ++ S E LI ++ DP R + + H +F
Sbjct: 239 YS--IPDDI-----RISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 100/203 (49%), Gaps = 4/203 (1%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++L+ +G G V A ++ T VA+K + + L REV+ ++ LNHPNI
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
+KL EV+ L+ I EY E E RS Q++ + + H+
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 123 HRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY-SPAI 180
HRDLK ENLL+ D+ +KIADFG + E + + Y APE L Q Y P +
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPE-LFQGKKYDGPEV 195
Query: 181 DMWAVGAILAELFTLSPIFPGDS 203
D+W++G IL L + S F G +
Sbjct: 196 DVWSLGVILYTLVSGSLPFDGQN 218
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL--REVKALRKLNH 59
ERYKI+++LG G VY A + VA+K + EE + REV +L+H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
NI+ + +V E++ + + EY+E E P S +F +Q+L G+ H H
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 120 GYFHRDLKPENLLV-TNDVLKIADFGLARELS--SMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KP+N+L+ +N LKI DFG+A+ LS S+ + T Y +PE + +
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE-QAKGEAT 189
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEI 205
D++++G +L E+ P F G++ +
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 4/203 (1%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++L+ +G G V A ++ T + VAVK + + L REV+ ++ LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
+KL EV+ L+ + EY E E R+ Q++ + + H+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 123 HRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY-SPAI 180
HRDLK ENLL+ D+ +KIADFG + E + + + Y APE L Q Y P +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYDGPEV 194
Query: 181 DMWAVGAILAELFTLSPIFPGDS 203
D+W++G IL L + S F G +
Sbjct: 195 DVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 50/303 (16%)
Query: 2 ERYKILEELGDGTCGCVY---KAFNVETYEIVAVKKMKRKFYFW---EECMNLREVKALR 55
E +++L LG G G V+ K T +I A+K +K+ + E L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 56 KLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
++ HP I+ L + +L+ I EY+ + ER+ F E +++++ L H
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTE-YVSTRWYRAPEVLLQS 173
+H+ G +RDLKPEN+++ + +K+ DFGL +E T + T Y APE+L++
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMR- 195
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSE---IDQLYKVCCILGAPDWTAFPEATNIS 230
S ++ A+D W++GA++ ++ T +P F G++ ID++ K C L P
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK--CKLNLP------------ 241
Query: 231 RLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRR-----PTADQALQHPFFNV 285
P + EA DL+ +L + R A + HPFF
Sbjct: 242 -------------------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282
Query: 286 ETW 288
W
Sbjct: 283 INW 285
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 50/303 (16%)
Query: 2 ERYKILEELGDGTCGCVY---KAFNVETYEIVAVKKMKRKFYFW---EECMNLREVKALR 55
E +++L LG G G V+ K T +I A+K +K+ + E L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 56 KLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
++ HP I+ L + +L+ I EY+ + ER+ F E +++++ L H
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTE-YVSTRWYRAPEVLLQS 173
+H+ G +RDLKPEN+++ + +K+ DFGL +E T + T Y APE+L++
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMR- 195
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSE---IDQLYKVCCILGAPDWTAFPEATNIS 230
S ++ A+D W++GA++ ++ T +P F G++ ID++ K C L P
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK--CKLNLP------------ 241
Query: 231 RLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRR-----PTADQALQHPFFNV 285
P + EA DL+ +L + R A + HPFF
Sbjct: 242 -------------------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282
Query: 286 ETW 288
W
Sbjct: 283 INW 285
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 4/203 (1%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++L+ +G G V A ++ T + VAVK + + L REV+ ++ LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
+KL EV+ L+ + EY E E R+ Q++ + + H+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 123 HRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY-SPAI 180
HRDLK ENLL+ D+ +KIADFG + E + + + Y APE L Q Y P +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYDGPEV 194
Query: 181 DMWAVGAILAELFTLSPIFPGDS 203
D+W++G IL L + S F G +
Sbjct: 195 DVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 136/295 (46%), Gaps = 49/295 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK-------RKFYFWEECMNLREVKAL 54
+ Y++ EELG G V K T + A K +K R+ EE REV L
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE--REVNIL 62
Query: 55 RKLNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
R++ HPNII L ++ ++ I E + L+ + E++ +E E F+ Q+L G+
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGV 121
Query: 114 AHMHRNGYFHRDLKPENLL-----VTNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
++H H DLKPEN++ V N +K+ DFG+A ++ + + T + APE
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 169 VLLQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPE 225
++ +Y P DMW++G I L + + F G+++ + L
Sbjct: 182 IV----NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL----------------- 220
Query: 226 ATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
TNIS ++ + E + N S A D I +L DP RR T Q+L+H
Sbjct: 221 -TNIS-AVNYDFDE-------EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 4/203 (1%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++L+ +G G V A ++ T + VAVK + + L REV+ ++ LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
+KL EV+ L+ + EY E E R+ Q++ + + H+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 123 HRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY-SPAI 180
HRDLK ENLL+ D+ +KIADFG + E + + Y APE L Q Y P +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE-LFQGKKYDGPEV 194
Query: 181 DMWAVGAILAELFTLSPIFPGDS 203
D+W++G IL L + S F G +
Sbjct: 195 DVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 128/286 (44%), Gaps = 37/286 (12%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNI 62
Y + +G G+ G V A T A KK+ + YF E+ + E++ ++ L+HPNI
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK--YFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 63 IKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
I+L E +N +++ + E L+ + +++ F E + M +L +A+ H+
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCHKLNV 127
Query: 122 FHRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
HRDLKPEN L D LK+ DFGLA V T +Y +P+VL Y
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLYG 185
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
P D W+ G ++ L P F ++ + + K+ FPE +
Sbjct: 186 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI-----REGTFTFPEKDWL-------- 232
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
N S +A LI +L + P +R T+ QAL+H +F
Sbjct: 233 -------------NVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 128/286 (44%), Gaps = 37/286 (12%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNI 62
Y + +G G+ G V A T A KK+ + YF E+ + E++ ++ L+HPNI
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK--YFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 63 IKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
I+L E +N +++ + E L+ + +++ F E + M +L +A+ H+
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCHKLNV 144
Query: 122 FHRDLKPENLLVTNDV----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
HRDLKPEN L D LK+ DFGLA V T +Y +P+VL Y
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLYG 202
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
P D W+ G ++ L P F ++ + + K+ FPE +
Sbjct: 203 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI-----REGTFTFPEKDWL-------- 249
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
N S +A LI +L + P +R T+ QAL+H +F
Sbjct: 250 -------------NVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 282
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
+++ E LG G G V + + +T E VA+K+ +++ E++ ++KLNHPN++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 64 KLKEV------VRENNELFFIFEYMEHN---LYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
+EV + N+ EY E Y E EG IR+ +S + L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
++H N HRDLKPEN+++ + KI D G A+EL TE+V T Y APE L
Sbjct: 137 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE-L 195
Query: 171 LQSSSYSPAIDMWAVGAILAELFT-LSPIFP 200
L+ Y+ +D W+ G + E T P P
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
+++ E LG G G V + + +T E VA+K+ +++ E++ ++KLNHPN++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 64 KLKEV------VRENNELFFIFEYMEHN---LYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
+EV + N+ EY E Y E EG IR+ +S + L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 115 HMHRNGYFHRDLKPENLLVTND----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
++H N HRDLKPEN+++ + KI D G A+EL TE+V T Y APE L
Sbjct: 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE-L 194
Query: 171 LQSSSYSPAIDMWAVGAILAELFT-LSPIFP 200
L+ Y+ +D W+ G + E T P P
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 4/203 (1%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++L+ +G G V A ++ T + VAV+ + + L REV+ ++ LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
+KL EV+ L+ + EY E E R+ Q++ + + H+
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 123 HRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY-SPAI 180
HRDLK ENLL+ D+ +KIADFG + E + + + Y APE L Q Y P +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYDGPEV 194
Query: 181 DMWAVGAILAELFTLSPIFPGDS 203
D+W++G IL L + S F G +
Sbjct: 195 DVWSLGVILYTLVSGSLPFDGQN 217
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 137/296 (46%), Gaps = 47/296 (15%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHP 60
E ++I+ ELGDG G VYKA N ET + A K ++ K EE + + E++ L +HP
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHP 68
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYH-IMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
I+KL + +L+ + E+ IM E +E +I+ QML+ L +H
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 120 GYFHRDLKPENLLVT-NDVLKIADFGL-ARELSSMPPYTEYVSTRWYRAPEVL----LQS 173
HRDLK N+L+T +++ADFG+ A+ L ++ ++ T ++ APEV+ ++
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVC-----CILGAPDWTAFPEATN 228
+ Y D+W++G L E+ + P + + L K+ +L W
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW-------- 240
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
S+ + + L I L +P RP+A Q L+HPF +
Sbjct: 241 -----SVEFRDFLKIALDK-------------------NPETRPSAAQLLEHPFVS 272
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 136/287 (47%), Gaps = 34/287 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
++Y E++G G G VY A +V T + VA+++M + +E + + E+ +R+ +PN
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENKNPN 79
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
I+ + +EL+ + EY+ +L ++ E EG+I + + LQ L +H N
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 121 YFHRDLKPENLLVTND-VLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HR++K +N+L+ D +K+ DFG +++ + V T ++ APEV+ + +Y P
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGP 196
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYS 238
+D+W++G + E+ P + ++ + LY + PE N +L +I
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-------NGTPELQNPEKLSAIFR- 248
Query: 239 EILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
D + + D +R +A + +QH F +
Sbjct: 249 -------------------DFLNRCLEMDVEKRGSAKELIQHQFLKI 276
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 4/203 (1%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++L+ +G G V A ++ T + VAVK + + L REV+ ++ LNHPNI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
+KL EV+ L+ + EY E E R+ Q++ + + H+
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIV 128
Query: 123 HRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY-SPAI 180
HRDLK ENLL+ D+ +KIADFG + E + + + Y APE L Q Y P +
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYDGPEV 187
Query: 181 DMWAVGAILAELFTLSPIFPGDS 203
D+W++G IL L + S F G +
Sbjct: 188 DVWSLGVILYTLVSGSLPFDGQN 210
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 137/296 (46%), Gaps = 47/296 (15%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHP 60
E ++I+ ELGDG G VYKA N ET + A K ++ K EE + + E++ L +HP
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHP 76
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYH-IMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
I+KL + +L+ + E+ IM E +E +I+ QML+ L +H
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 120 GYFHRDLKPENLLVT-NDVLKIADFGL-ARELSSMPPYTEYVSTRWYRAPEVL----LQS 173
HRDLK N+L+T +++ADFG+ A+ L ++ ++ T ++ APEV+ ++
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVC-----CILGAPDWTAFPEATN 228
+ Y D+W++G L E+ + P + + L K+ +L W
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW-------- 248
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
S+ + + L I L +P RP+A Q L+HPF +
Sbjct: 249 -----SVEFRDFLKIALDK-------------------NPETRPSAAQLLEHPFVS 280
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 135/288 (46%), Gaps = 41/288 (14%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVV 69
LG GT G VY ++ +A+K++ + + + ++ E+ + L H NI++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH-EEIALHKHLKHKNIVQYLGSF 88
Query: 70 RENNELFFIFEYMEH----NLYHIMRERQIPFSEGE--IRSFMSQMLQGLAHMHRNGYFH 123
EN FI +ME +L ++R + P + E I + Q+L+GL ++H N H
Sbjct: 89 SENG---FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 124 RDLKPENLLVT--NDVLKIADFGLARELSSMPPYTE-YVSTRWYRAPEVLLQS-SSYSPA 179
RD+K +N+L+ + VLKI+DFG ++ L+ + P TE + T Y APE++ + Y A
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 180 IDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSE 239
D+W++G + E+ T P F Y+ LG P F + +
Sbjct: 206 ADIWSLGCTIIEMATGKPPF---------YE----LGEPQAAMF----------KVGMFK 242
Query: 240 ILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
+ P +I + S EA I + DP +R A+ L F V +
Sbjct: 243 VHP----EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 100/203 (49%), Gaps = 4/203 (1%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++ + +G G V A +V T VAVK + + L REV+ ++ LNHPNI
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
+KL EV+ L+ + EY E E R+ Q++ + + H+
Sbjct: 77 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIV 136
Query: 123 HRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY-SPAI 180
HRDLK ENLL+ D+ +KIADFG + E + + + Y APE L Q Y P +
Sbjct: 137 HRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPE-LFQGKKYDGPEV 195
Query: 181 DMWAVGAILAELFTLSPIFPGDS 203
D+W++G IL L + S F G +
Sbjct: 196 DVWSLGVILYTLVSGSLPFDGQN 218
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 135/295 (45%), Gaps = 49/295 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK-------RKFYFWEECMNLREVKAL 54
+ Y++ EELG G V K T + A K +K R+ EE REV L
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE--REVNIL 69
Query: 55 RKLNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
R++ HPNII L ++ ++ I E + L+ + E++ +E E F+ Q+L G+
Sbjct: 70 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGV 128
Query: 114 AHMHRNGYFHRDLKPENLL-----VTNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
++H H DLKPEN++ V N +K+ DFG+A ++ + + T + APE
Sbjct: 129 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 188
Query: 169 VLLQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPE 225
++ +Y P DMW++G I L + + F G+++ + L
Sbjct: 189 IV----NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL----------------- 227
Query: 226 ATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
TNIS ++ + E + N S A D I +L DP RR Q+L+H
Sbjct: 228 -TNIS-AVNYDFDE-------EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEH 273
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 135/295 (45%), Gaps = 49/295 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK-------RKFYFWEECMNLREVKAL 54
+ Y++ EELG G V K T + A K +K R+ EE REV L
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE--REVNIL 83
Query: 55 RKLNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
R++ HPNII L ++ ++ I E + L+ + E++ +E E F+ Q+L G+
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGV 142
Query: 114 AHMHRNGYFHRDLKPENLL-----VTNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
++H H DLKPEN++ V N +K+ DFG+A ++ + + T + APE
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 169 VLLQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPE 225
++ +Y P DMW++G I L + + F G+++ + L
Sbjct: 203 IV----NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL----------------- 241
Query: 226 ATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
TNIS ++ + E + N S A D I +L DP RR Q+L+H
Sbjct: 242 -TNIS-AVNYDFDE-------EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEH 287
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 51/327 (15%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETY-EIVAVKKMKRKFYFWEECMNLREVKALRKLN--H 59
RY+I++ LG+G G V + + + VAVK +K + E + E++ L LN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS--EIQVLEHLNTTD 72
Query: 60 PN----IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ-IPFSEGEIRSFMSQMLQGLA 114
PN +++ E + + +FE + + Y ++E +PF IR Q+ + +
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 115 HMHRNGYFHRDLKPENLL--------------------VTNDVLKIADFGLARELSSMPP 154
+H N H DLKPEN+L + N +K+ DFG A
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--TYDDEH 190
Query: 155 YTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
++ V R YRAPEV+L + +S D+W++G IL E + +FP + L + I
Sbjct: 191 HSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 215 LG----------------APDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAID 258
LG D + E ++ R +S + + LS + + + D
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL--FD 307
Query: 259 LIWQLCSWDPLRRPTADQALQHPFFNV 285
LI ++ +DP +R T +AL+HPFF++
Sbjct: 308 LIQKMLEYDPAKRITLREALKHPFFDL 334
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 45/292 (15%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMKRKFYFWEECMNL--REVKALRKLN 58
Y I EELG G V K T Y +KK + + C REV LR++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNII L +V ++ I E + L+ + +++ SE E SF+ Q+L G+ ++H
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH 132
Query: 118 RNGYFHRDLKPENLLVTNDV-----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
H DLKPEN+++ + +K+ DFGLA E+ + T + APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-- 190
Query: 173 SSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNI 229
+Y P DMW++G I L + + F GD++ + L + + D F + + +
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 230 SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
++ D I +L + +R T +AL+HP
Sbjct: 249 AK--------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
+RY++++++G G G + ++ E+VAVK ++R E RE+ R L HPN
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK--REIINHRSLRHPN 75
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
I++ KEV+ L + EY FSE E R F Q++ G+++ H
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 122 FHRDLKPENLLVTND---VLKIADFGLARE--LSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRDLK EN L+ LKI DFG ++ L S P T V T Y APEVLL+
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYD 193
Query: 177 SPAIDMWAVGAIL 189
D+W+ G L
Sbjct: 194 GKVADVWSCGVTL 206
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVV 69
LG GT G VY ++ +A+K++ + + + ++ E+ + L H NI++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH-EEIALHKHLKHKNIVQYLGSF 74
Query: 70 RENNELFFIFEYMEH----NLYHIMRERQIPFSEGE--IRSFMSQMLQGLAHMHRNGYFH 123
EN FI +ME +L ++R + P + E I + Q+L+GL ++H N H
Sbjct: 75 SENG---FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 124 RDLKPENLLVT--NDVLKIADFGLARELSSMPPYTE-YVSTRWYRAPEVLLQS-SSYSPA 179
RD+K +N+L+ + VLKI+DFG ++ L+ + P TE + T Y APE++ + Y A
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 191
Query: 180 IDMWAVGAILAELFTLSPIF 199
D+W++G + E+ T P F
Sbjct: 192 ADIWSLGCTIIEMATGKPPF 211
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 102/206 (49%), Gaps = 10/206 (4%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL-REVKALRKLNHPNI 62
Y++L+ +G G V A ++ T + VAVK + + L REV+ + LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 63 IKLKEVVRENNELFFIFEYMEHNL---YHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+KL EV+ L+ + EY Y + R E E R+ Q++ + + H+
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRX---KEKEARAKFRQIVSAVQYCHQK 132
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY-S 177
HRDLK ENLL+ D +KIADFG + E + + Y APE L Q Y
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE-LFQGKKYDG 191
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDS 203
P +D+W++G IL L + S F G +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 136/306 (44%), Gaps = 35/306 (11%)
Query: 7 LEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLK 66
+E LG G V+ T ++ A+K +K+ F + + E+ L+K+ H NI+ L+
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE-NEIAVLKKIKHENIVTLE 72
Query: 67 EVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRD 125
++ + + + + L+ + ER + ++E + + Q+L + ++H NG HRD
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGV-YTEKDASLVIQQVLSAVKYLHENGIVHRD 131
Query: 126 LKPENLLV----TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAID 181
LKPENLL N + I DFGL++ + + T Y APEVL Q YS A+D
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLAQ-KPYSKAVD 189
Query: 182 MWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEIL 241
W++G I L P F ++E + + I Y E
Sbjct: 190 CWSIGVITYILLCGYPPFYEETE----------------------SKLFEKIKEGYYEFE 227
Query: 242 PINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLHDPLELRL 301
DI S A D I L DP R T ++AL HP+ + T + ++ + L++
Sbjct: 228 SPFWDDI----SESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSLQI 283
Query: 302 NNMGSK 307
+K
Sbjct: 284 QKNFAK 289
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
S + D+WA+G I+ +L + G P + A E ++I +
Sbjct: 212 -SKSSDLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 249
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 250 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 124/271 (45%), Gaps = 36/271 (13%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL-NHPNIIKLKEV 68
LG+G+ K + ++ + AVK + ++ E +E+ AL+ HPNI+KL EV
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRM----EANTQKEITALKLCEGHPNIVKLHEV 74
Query: 69 VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKP 128
+ F + E + +++ FSE E M +++ ++HMH G HRDLKP
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKP 134
Query: 129 ENLLVT--NDVL--KIADFGLARELSSMPPYTEYVS----TRWYRAPEVLLQSSSYSPAI 180
ENLL T ND L KI DFG AR PP + + T Y APE LL + Y +
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFAR---LKPPDNQPLKTPCFTLHYAAPE-LLNQNGYDESC 190
Query: 181 DMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEI 240
D+W++G IL + LS P S L C T+ E + S+
Sbjct: 191 DLWSLGVILYTM--LSGQVPFQSHDRSL--TC--------TSAVEIMKKIKKGDFSFE-- 236
Query: 241 LPINLSDIIPNASMEAIDLIWQLCSWDPLRR 271
+ N S EA DLI L + DP +R
Sbjct: 237 -----GEAWKNVSQEAKDLIQGLLTVDPNKR 262
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 4/213 (1%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLNHPN 61
Y + + LG GT G V + T VAVK + R+ + + RE++ L+ HP+
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
IIKL +V+ +++F + EY+ + E E R Q+L G+ + HR+
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 122 FHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAI 180
HRDLKPEN+L+ + KIADFGL+ +S + Y APEV+ P +
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEV 197
Query: 181 DMWAVGAILAELFTLSPIFPGDSEIDQLYKVCC 213
D+W+ G IL L + F D + L+K C
Sbjct: 198 DIWSSGVILYALLCGTLPF-DDDHVPTLFKKIC 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E +++I +
Sbjct: 212 XKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEGLIFAKIIKL 249
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 250 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 94/193 (48%), Gaps = 9/193 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
+RY++++++G G G + + E+VAVK ++R E RE+ R L HPN
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK--REIINHRSLRHPN 76
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
I++ KEV+ L + EY FSE E R F Q++ G+++ H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 122 FHRDLKPENLLVTND---VLKIADFGLARE--LSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRDLK EN L+ LKIADFG ++ L S P V T Y APEVLL+
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP--KSAVGTPAYIAPEVLLKKEYD 194
Query: 177 SPAIDMWAVGAIL 189
D+W+ G L
Sbjct: 195 GKVADVWSCGVTL 207
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 136/296 (45%), Gaps = 40/296 (13%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKLNHPNI 62
++I+ ELGD G VYKA N ET + A K + K EE + + E+ L +HPNI
Sbjct: 14 WEIIGELGD--FGKVYKAQNKETSVLAAAKVIDTKSE--EELEDYMVEIDILASCDHPNI 69
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYH-IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
+KL + N L+ + E+ +M E + P +E +I+ Q L L ++H N
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 129
Query: 122 FHRDLKPENLLVTNDV-LKIADFGLARE--LSSMPPYTEYVSTRWYRAPEVLLQSSS--- 175
HRDLK N+L T D +K+ADFG++ + + + ++ T ++ APEV++ +S
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 176 -YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLIS 234
Y D+W++G L E+ + P + + L K+ P A P SR S
Sbjct: 190 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA--KSEPPTLAQP-----SRWSS 242
Query: 235 ISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
N D + + +D W T Q LQHPF V++ P
Sbjct: 243 ---------NFKDFLKKCLEKNVDARW-----------TTSQLLQHPFVTVDSNKP 278
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 94/193 (48%), Gaps = 9/193 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
+RY++++++G G G + ++ E+VAVK ++R RE+ R L HPN
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVK--REIINHRSLRHPN 76
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
I++ KEV+ L + EY FSE E R F Q++ G+++ H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 122 FHRDLKPENLLVTND---VLKIADFGLARE--LSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRDLK EN L+ LKI DFG ++ L S P T V T Y APEVLL+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYD 194
Query: 177 SPAIDMWAVGAIL 189
D+W+ G L
Sbjct: 195 GKVADVWSCGVTL 207
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E +++I +
Sbjct: 212 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEGLIFAKIIKL 249
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 250 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 34/221 (15%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVE--TY---EIVAVKKMKRKFYFWEE----------- 44
+ +Y + +E+G G+ G V A+N TY ++++ KK+ R+ F
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 45 -CMNLR--------EVKALRKLNHPNIIKLKEVVRENNE--LFFIFEYMEHNLYHIMRER 93
C+ R E+ L+KL+HPN++KL EV+ + NE L+ +FE + N +M
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELV--NQGPVMEVP 129
Query: 94 QI-PFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLAREL-S 150
+ P SE + R + +++G+ ++H HRD+KP NLLV D +KIADFG++ E
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 151 SMPPYTEYVSTRWYRAPEVLLQSSSY--SPAIDMWAVGAIL 189
S + V T + APE L ++ A+D+WA+G L
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 136/305 (44%), Gaps = 58/305 (19%)
Query: 4 YKILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNH 59
Y + E +G G+ CV+KA N+E Y + + K KR E + LR H
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNME-YAVKVIDKSKRDPSEEIEIL-------LRYGQH 80
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNII LK+V + ++ + E M L I+R++ FSE E + + + + ++H
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLH 138
Query: 118 RNGYFHRDLKPENLLVTN-----DVLKIADFGLARELSS------MPPYTEYVSTRWYRA 166
G HRDLKP N+L + + L+I DFG A++L + P YT + A
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN-----FVA 193
Query: 167 PEVLLQSSSYSPAIDMWAVGAILAELFT-LSPIFPGDSEIDQLYKVCCILGAPDWTAFPE 225
PEV L+ Y D+W++G +L + +P G S+ + ++ +G+ +T
Sbjct: 194 PEV-LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRIGSGKFTLSGG 250
Query: 226 ATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
N S A DL+ ++ DP +R TA Q LQHP+
Sbjct: 251 NWN----------------------TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
Query: 286 ETWVP 290
+ +P
Sbjct: 289 KDKLP 293
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 130/308 (42%), Gaps = 45/308 (14%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL----REVKALRKLNH 59
Y++ E +G G V + N ET + AVK + + ++ RE L H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPF--SEGEIRSFMSQMLQGLAH 115
P+I++L E + L+ +FE+M+ + I++ F SE +M Q+L+ L +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 116 MHRNGYFHRDLKPENLLVTNDV----LKIADFGLARELS-SMPPYTEYVSTRWYRAPEVL 170
H N HRD+KPEN+L+ + +K+ DFG+A +L S V T + APEV
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEV- 204
Query: 171 LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSE--IDQLYKVCCILGAPDWTAFPEATN 228
++ Y +D+W G IL L + F G E + + K + W+ E+
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISES-- 262
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETW 288
A DL+ ++ DP R T +AL HP+
Sbjct: 263 ---------------------------AKDLVRRMLMLDPAERITVYEALNHPWLKERDR 295
Query: 289 VPYPLHDP 296
Y +H P
Sbjct: 296 YAYKIHLP 303
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 17/235 (7%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
+ ++I +++G G VY+A + VA+KK++ +C ++E+ L++
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADC--IKEIDLLKQ 88
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-----LYHIMRERQIPFSEGEIRSFMSQMLQ 111
LNHPN+IK E+NEL + E + + H +++++ E + + Q+
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL-IPERTVWKYFVQLCS 147
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE-YVSTRWYRAPEV 169
L HMH HRD+KP N+ +T V+K+ D GL R SS V T +Y +PE
Sbjct: 148 ALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE- 206
Query: 170 LLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFP 224
+ + Y+ D+W++G +L E+ L F GD LY +C + D+ P
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCKKIEQCDYPPLP 259
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLL-----VTNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLLVTND-----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLLVTND-----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLL-----VTNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLL-----VTNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 69
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 128
Query: 116 MHRNGYFHRDLKPENLL-----VTNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V +KI DFGLA ++ + T + APE++
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 189 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 231
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 232 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLLVTND-----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLLVTND-----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 137/307 (44%), Gaps = 58/307 (18%)
Query: 2 ERYKILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL 57
+ Y + E +G G+ CV+KA N+E Y + + K KR E + LR
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNME-YAVKVIDKSKRDPSEEIEIL-------LRYG 78
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
HPNII LK+V + ++ + E M L I+R++ FSE E + + + + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEY 136
Query: 116 MHRNGYFHRDLKPENLLVTN-----DVLKIADFGLARELSS------MPPYTEYVSTRWY 164
+H G HRDLKP N+L + + L+I DFG A++L + P YT +
Sbjct: 137 LHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN-----F 191
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT-LSPIFPGDSEIDQLYKVCCILGAPDWTAF 223
APEV L+ Y D+W++G +L + +P G S+ + ++ +G+ +T
Sbjct: 192 VAPEV-LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRIGSGKFTLS 248
Query: 224 PEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
N S A DL+ ++ DP +R TA Q LQHP+
Sbjct: 249 GGNWN----------------------TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWV 286
Query: 284 NVETWVP 290
+ +P
Sbjct: 287 TQKDKLP 293
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 115/214 (53%), Gaps = 12/214 (5%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE---EC-MNLREVKALRK 56
++ ++ + LG G+ G V A ET ++ AVK +K+ + EC M + + +L +
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
NHP + +L + + LFF+ E++ ++HI + R+ F E R + ++++ L
Sbjct: 82 -NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAEIISALM 138
Query: 115 HMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQ 172
+H G +RDLK +N+L+ ++ K+ADFG+ +E + + + T Y APE+ LQ
Sbjct: 139 FLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI-LQ 197
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEID 206
Y PA+D WA+G +L E+ F ++E D
Sbjct: 198 EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLLVTND-----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 69
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 128
Query: 116 MHRNGYFHRDLKPENLL-----VTNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V +KI DFGLA ++ + T + APE++
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 189 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 231
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 232 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLLVTND-----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLLVTND-----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLLVTND-----VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 45/300 (15%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 215 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 252
Query: 236 SYSEILPINLSDIIPNASM-EAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y P A +A DL+ +L D +R ++ HPFF TW
Sbjct: 253 EYD----------FPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 302
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 126/287 (43%), Gaps = 33/287 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
+RY++++++G G G + ++ E+VAVK ++R E RE+ R L HPN
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK--REIINHRSLRHPN 76
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
I++ KEV+ L + EY FSE E R F Q++ G+++ H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 122 FHRDLKPENLLVTND---VLKIADFGLARE--LSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRDLK EN L+ LKI FG ++ L S P T V T Y APEVLL+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYD 194
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
D+W+ G L + + F E K I R++++
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKT-----------------IHRILNVQ 237
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
Y+ + D + + S E LI ++ DP +R + + H +F
Sbjct: 238 YA------IPDYV-HISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 213 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 250
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 251 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 300
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 210 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 247
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 248 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 297
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 213 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 250
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 251 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 300
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 212 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 249
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 250 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 212 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 249
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 250 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 210 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 247
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 248 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 297
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 126/287 (43%), Gaps = 33/287 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
+RY++++++G G G + ++ E+VAVK ++R E RE+ R L HPN
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK--REIINHRSLRHPN 76
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
I++ KEV+ L + EY FSE E R F Q++ G+++ H
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 122 FHRDLKPENLLVTND---VLKIADFGLARE--LSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRDLK EN L+ LKI FG ++ L S P T V T Y APEVLL+
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT--VGTPAYIAPEVLLKKEYD 194
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
D+W+ G L + + F E K I R++++
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKT-----------------IHRILNVQ 237
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
Y+ + D + + S E LI ++ DP +R + + H +F
Sbjct: 238 YA------IPDYV-HISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 190 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 227
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 228 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 277
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 212 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 249
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 250 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 210 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 247
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 248 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 297
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 139/307 (45%), Gaps = 57/307 (18%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-----LREVKALRKLN 58
Y++ E +G G V A+ E VA+K++ E+C L+E++A+ + +
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-----LEKCQTSMDELLKEIQAMSQCH 66
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN-----LYHIMRE---RQIPFSEGEIRSFMSQML 110
HPNI+ +EL+ + + + + HI+ + + E I + + ++L
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE------YVSTRW 163
+GL ++H+NG HRD+K N+L+ D ++IADFG++ L++ T +V T
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAF 223
+ APEV+ Q Y D+W+ G EL T GA + +
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELAT---------------------GAAPYHKY 225
Query: 224 PEATNISRLISISYSEILPINLSDIIPNASM-----EAIDLIWQLC-SWDPLRRPTADQA 277
P + ++++ P +L + + M ++ + LC DP +RPTA +
Sbjct: 226 PPMKVL--MLTLQND---PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 280
Query: 278 LQHPFFN 284
L+H FF
Sbjct: 281 LRHKFFQ 287
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 217 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 254
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 255 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 304
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 139/307 (45%), Gaps = 57/307 (18%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-----LREVKALRKLN 58
Y++ E +G G V A+ E VA+K++ E+C L+E++A+ + +
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-----LEKCQTSMDELLKEIQAMSQCH 71
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN-----LYHIMRE---RQIPFSEGEIRSFMSQML 110
HPNI+ +EL+ + + + + HI+ + + E I + + ++L
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE------YVSTRW 163
+GL ++H+NG HRD+K N+L+ D ++IADFG++ L++ T +V T
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAF 223
+ APEV+ Q Y D+W+ G EL T GA + +
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELAT---------------------GAAPYHKY 230
Query: 224 PEATNISRLISISYSEILPINLSDIIPNASM-----EAIDLIWQLC-SWDPLRRPTADQA 277
P + ++++ P +L + + M ++ + LC DP +RPTA +
Sbjct: 231 PPMKVL--MLTLQND---PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
Query: 278 LQHPFFN 284
L+H FF
Sbjct: 286 LRHKFFQ 292
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y EELG G V K T Y +KK + R+ E+ REV L++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE--REVSILKE 70
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ HPN+I L EV ++ I E + L+ + E++ +E E F+ Q+L G+ +
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYY 129
Query: 116 MHRNGYFHRDLKPENLL-----VTNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN++ V +KI DFGLA ++ + T + APE++
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L V +
Sbjct: 190 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV------------- 232
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+ + + + N S A D I +L DP +R T +LQHP
Sbjct: 233 ------NYEFED-------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 188 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 225
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 226 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 275
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEIXINKMLN 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 209 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 246
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y P P A DL+ +L D +R ++ HPFF TW
Sbjct: 247 EYD--FP---EKFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 296
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 33/284 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E+Y I E+LG G G V++ + + K +K K ++ + +E+ L H N
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRN 62
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
I+ L E EL IFE++ +++ + +E EI S++ Q+ + L +H +
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 121 YFHRDLKPENLLVT---NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
H D++PEN++ + +KI +FG AR+L + + Y APEV Q S
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-HQHDVVS 181
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
A DMW++G ++ L LS I P +E +Q ++ + ++T EA +
Sbjct: 182 TATDMWSLGTLVYVL--LSGINPFLAETNQ--QIIENIMNAEYTFDEEA----------F 227
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
EI S+EA+D + +L + R TA +ALQHP
Sbjct: 228 KEI------------SIEAMDFVDRLLVKERKSRMTASEALQHP 259
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEIXINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y I EELG G V K T Y +KK + R+ EE REV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ H N+I L +V ++ I E + L+ + +++ SE E SF+ Q+L G+ +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNY 130
Query: 116 MHRNGYFHRDLKPENLLVTNDV-----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +K+ DFGLA E+ + T + APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L + + D F + +
Sbjct: 191 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+++ D I +L + +R T +AL+HP
Sbjct: 247 ELAK--------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 194 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 231
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y P P A DL+ +L D +R ++ HPFF TW
Sbjct: 232 EYD--FP---EKFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 281
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 187 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 224
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 225 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 274
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEIXINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL--REVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 189 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 226
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 227 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 276
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ V A + T A+K ++++ E + RE + +L+H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 209 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 246
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y P P A DL+ +L D +R ++ HPFF TW
Sbjct: 247 EYD--FP---EKFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 296
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 124/238 (52%), Gaps = 9/238 (3%)
Query: 3 RYKILEELGDGTCGCVY---KAFNVETYEIVAVKKMKRK-FYFWEECMNLREVKALRKLN 58
++++L+ LG G+ G V+ K + ++ A+K +K+ + E L ++N
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
HP I+KL + +L+ I +++ +++ F+E +++ +++++ L H+H
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 119 NGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
G +RDLKPEN+L+ + +K+ DFGL++E + + T Y APEV + +
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRGH 203
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVC-CILGAPDWTAFPEATNISRLI 233
+ + D W+ G ++ E+ T + F G + + + LG P + + PEA ++ R++
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLS-PEAQSLLRML 260
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y I EELG G V K T Y +KK + R+ EE REV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ H N+I L +V ++ I E + L+ + +++ SE E SF+ Q+L G+ +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNY 130
Query: 116 MHRNGYFHRDLKPENLLVTNDV-----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +K+ DFGLA E+ + T + APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L + + D F + +
Sbjct: 191 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+++ D I +L + +R T +AL+HP
Sbjct: 247 ELAK--------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 124/238 (52%), Gaps = 9/238 (3%)
Query: 3 RYKILEELGDGTCGCVY---KAFNVETYEIVAVKKMKR-KFYFWEECMNLREVKALRKLN 58
++++L+ LG G+ G V+ K + ++ A+K +K+ + E L ++N
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
HP I+KL + +L+ I +++ +++ F+E +++ +++++ L H+H
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 119 NGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
G +RDLKPEN+L+ + +K+ DFGL++E + + T Y APEV + +
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRGH 203
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVC-CILGAPDWTAFPEATNISRLI 233
+ + D W+ G ++ E+ T + F G + + + LG P + + PEA ++ R++
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLS-PEAQSLLRML 260
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 124/238 (52%), Gaps = 9/238 (3%)
Query: 3 RYKILEELGDGTCGCVY---KAFNVETYEIVAVKKMKRK-FYFWEECMNLREVKALRKLN 58
++++L+ LG G+ G V+ K + ++ A+K +K+ + E L ++N
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
HP I+KL + +L+ I +++ +++ F+E +++ +++++ L H+H
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 119 NGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
G +RDLKPEN+L+ + +K+ DFGL++E + + T Y APEV + +
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV-VNRRGH 204
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVC-CILGAPDWTAFPEATNISRLI 233
+ + D W+ G ++ E+ T + F G + + + LG P + + PEA ++ R++
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLS-PEAQSLLRML 261
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 136/306 (44%), Gaps = 42/306 (13%)
Query: 8 EELGDGTCGCVYKAFNVETYEIVAVKKMK-RKFYFWEECMNLREVKALRKLNHPNIIKLK 66
E LG G G V+K T +A K +K R EE N E+ + +L+H N+I+L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKN--EISVMNQLDHANLIQLY 152
Query: 67 EVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRD 125
+ N++ + EY++ L+ + + +E + FM Q+ +G+ HMH+ H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 126 LKPENLLVTN---DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAIDM 182
LKPEN+L N +KI DFGLAR T + APEV+ P DM
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPT-DM 271
Query: 183 WAVGAILAELFT-LSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEIL 241
W+VG I L + LSP F GD++ + L + A W E
Sbjct: 272 WSVGVIAYMLLSGLSP-FLGDNDAETLNNIL----ACRWDLEDE---------------- 310
Query: 242 PINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPLHDPLEL-R 300
DI S EA + I +L + R +A +AL+HP+ + + LH L +
Sbjct: 311 --EFQDI----SEEAKEFISKLLIKEKSWRISASEALKHPWLS-----DHKLHSRLSAQK 359
Query: 301 LNNMGS 306
N GS
Sbjct: 360 KKNRGS 365
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 43/288 (14%)
Query: 8 EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLNH-PNIIK 64
+ELG G V + + T + A K +K++ ++C L E+ L P +I
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 65 LKEVVRENNELFFIFEYMEHN-LYHI-MRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L EV +E+ I EY ++ + + E SE ++ + Q+L+G+ ++H+N
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153
Query: 123 HRDLKPENLLVTN----DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
H DLKP+N+L+++ +KI DFG++R++ E + T Y APE+L +Y P
Sbjct: 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL----NYDP 209
Query: 179 ---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
A DMW +G I L T + F G+ + NIS+ +++
Sbjct: 210 ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL------------------NISQ-VNV 250
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
YSE + + S A D I L +P +RPTA+ L H +
Sbjct: 251 DYSE-------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 61
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 182 FHAEPVDVWSCGIVLTAMLA 201
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y I EELG G V K T Y +KK + R+ EE REV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ H N+I L +V ++ I E + L+ + +++ SE E SF+ Q+L G+ +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNY 130
Query: 116 MHRNGYFHRDLKPENLLVTNDV-----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +K+ DFGLA E+ + T + APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L + + D F +
Sbjct: 191 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+++ D I +L + +R T +AL+HP
Sbjct: 247 ELAK--------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y I EELG G V K T Y +KK + R+ EE REV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ H N+I L +V ++ I E + L+ + +++ SE E SF+ Q+L G+ +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNY 130
Query: 116 MHRNGYFHRDLKPENLLVTNDV-----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +K+ DFGLA E+ + T + APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L + + D F +
Sbjct: 191 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+++ D I +L + +R T +AL+HP
Sbjct: 247 ELAK--------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 140/286 (48%), Gaps = 37/286 (12%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMK-RKFYFWEECMNLREVKALRKLNHPNIIKLKE 67
++G+G+ G V A + VAVK M RK E N EV +R H N++++ +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFN--EVVIMRDYQHFNVVEMYK 109
Query: 68 VVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDL 126
EL+ + E+++ L I+ Q+ +E +I + +LQ LA++H G HRD+
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVS--QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDI 167
Query: 127 KPENLLVTND-VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWA 184
K +++L+T D +K++DFG ++S +P V T ++ APEV + S Y+ +D+W+
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEV-ISRSLYATEVDIWS 226
Query: 185 VGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPIN 244
+G ++ E+ P + DS + + + + +P P+ N S S +L
Sbjct: 227 LGIMVIEMVDGEPPYFSDSPVQAMKR---LRDSPP----PKLKN-----SHKVSPVLR-- 272
Query: 245 LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + ++ DP R TA + L HPF ++T +P
Sbjct: 273 -------------DFLERMLVRDPQERATAQELLDHPFL-LQTGLP 304
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E +E+ + LN
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK--KEICINKMLN 62
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 183 FHAEPVDVWSCGIVLTAMLA 202
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 4 YKILEELGDGTCGCVYKAFNVET---YEIVAVKKMK----RKFYFWEECMNLREVKALRK 56
Y I EELG G V K T Y +KK + R+ EE REV LR+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE--REVSILRQ 71
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
+ H N+I L +V ++ I E + L+ + +++ SE E SF+ Q+L G+ +
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNY 130
Query: 116 MHRNGYFHRDLKPENLLVTNDV-----LKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+H H DLKPEN+++ + +K+ DFGLA E+ + T + APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 171 LQSSSYSP---AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+Y P DMW++G I L + + F GD++ + L + + D F +
Sbjct: 191 ----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHP 281
+++ D I +L + +R T +AL+HP
Sbjct: 247 ELAK--------------------------DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 132/299 (44%), Gaps = 43/299 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECM--NLREVKALRKLNH 59
E +K + LG+G+ A + T A+K ++++ E + RE + +L+H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P +KL +++ +L+F Y ++ + F E R + ++++ L ++H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS 175
G HRDLKPEN+L+ D+ ++I DFG A+ L S +V T Y +PE+L + S+
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISI 235
+ D+WA+G I+ +L + G P + A E ++I +
Sbjct: 210 CKSS-DLWALGCIIYQL---------------------VAGLPPFRAGNEYLIFQKIIKL 247
Query: 236 SYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA------LQHPFFNVETW 288
Y D +A DL+ +L D +R ++ HPFF TW
Sbjct: 248 EY---------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 297
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 8/200 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK--KMKRKFYFWEECMNLREVKALRKLN 58
+E + +++ LG+G G V A N T E VAVK MKR E + A+ LN
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAM--LN 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
H N++K RE N + EY E I E + + F Q++ G+ ++H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSS 174
G HRD+KPENLL+ D LKI+DFGLA R + + T Y APE+L +
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 175 SYSPAIDMWAVGAILAELFT 194
++ +D+W+ G +L +
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 126/287 (43%), Gaps = 39/287 (13%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL--REVKALRKLNHPN 61
Y + + LG GT G V + T VAVK + R+ + + RE++ L+ HP+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 62 IIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
IIKL +V+ + F + EY+ +I + ++ E E R Q+L + + HR+
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV--EEMEARRLFQQILSAVDYCHRH 130
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRDLKPEN+L+ + KIADFGL+ +S + + Y APEV+ P
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGP 190
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSE-IDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
+D+W+ G IL L L P D E + L+K I G + PE N S
Sbjct: 191 EVDIWSCGVILYAL--LCGTLPFDDEHVPTLFKK--IRGGVFY--IPEYLNRS------- 237
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
L+ + DPL+R T +H +F
Sbjct: 238 ------------------VATLLMHMLQVDPLKRATIKDIREHEWFK 266
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 141/298 (47%), Gaps = 58/298 (19%)
Query: 4 YKILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNH 59
Y++ E++G G+ C++KA N+E + + + K KR E + LR H
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNME-FAVKIIDKSKRDPTEEIEIL-------LRYGQH 75
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNII LK+V + ++ + E M+ L I+R++ FSE E + + + + + ++H
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLH 133
Query: 118 RNGYFHRDLKPENLLVTN-----DVLKIADFGLARELSS------MPPYTEYVSTRWYRA 166
G HRDLKP N+L + + ++I DFG A++L + P YT + A
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN-----FVA 188
Query: 167 PEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA 226
PEV L+ Y A D+W++G +L + T F PD T PE
Sbjct: 189 PEV-LERQGYDAACDIWSLGVLLYTMLTGYTPFA---------------NGPDDT--PEE 230
Query: 227 TNISRLISISYSEILPINLSDIIPNA-SMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
++R+ S +S LS N+ S A DL+ ++ DP +R TA L+HP+
Sbjct: 231 I-LARIGSGKFS------LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 121/237 (51%), Gaps = 9/237 (3%)
Query: 4 YKILEELGDGTCGCVY---KAFNVETYEIVAVKKMKR-KFYFWEECMNLREVKALRKLNH 59
+++L+ LG G+ G V+ K ++ + A+K +K+ + E L +NH
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P ++KL + +L+ I +++ +++ F+E +++ +++++ GL H+H
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
G +RDLKPEN+L+ + +K+ DFGL++E + + T Y APEV + +S
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEV-VNRQGHS 208
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVC-CILGAPDWTAFPEATNISRLI 233
+ D W+ G ++ E+ T S F G + + + LG P + + EA ++ R +
Sbjct: 209 HSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLS-TEAQSLLRAL 264
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 69
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 70 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E+ + WY
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEFFKVKEPGESPIFWY 184
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 185 -APESLTE-SKFSVASDVWSFGVVLYELFT 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 125/287 (43%), Gaps = 39/287 (13%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL--REVKALRKLNHPN 61
Y + + LG GT G V + T VAVK + R+ + + RE++ L+ HP+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 62 IIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
IIKL +V+ + F + EY+ +I + ++ E E R Q+L + + HR+
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV--EEMEARRLFQQILSAVDYCHRH 130
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRDLKPEN+L+ + KIADFGL+ +S + Y APEV+ P
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP 190
Query: 179 AIDMWAVGAILAELFTLSPIFPGDSE-IDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
+D+W+ G IL L L P D E + L+K I G + PE N S
Sbjct: 191 EVDIWSCGVILYAL--LCGTLPFDDEHVPTLFKK--IRGGVFY--IPEYLNRS------- 237
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
L+ + DPL+R T +H +F
Sbjct: 238 ------------------VATLLMHMLQVDPLKRATIKDIREHEWFK 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 12/217 (5%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ Y++ E +G G V A ++ T E+VA+K M + + E++AL+ L H
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 61 NIIKLKEVVRENNELFFIFEYM---EHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
+I +L V+ N++F + EY E Y I ++R SE E R Q++ +A++H
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR---LSEEETRVVFRQIVSAVAYVH 125
Query: 118 RNGYFHRDLKPENLLVTN-DVLKIADFGLARELSSMPPY--TEYVSTRWYRAPEVLLQSS 174
GY HRDLKPENLL LK+ DFGL + Y + Y APE++ S
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 175 SYSPAIDMWAVGAILAELFTLSPIFP-GDSEIDQLYK 210
D+W++G +L L + P D + LYK
Sbjct: 186 YLGSEADVWSMGILLYVL--MCGFLPFDDDNVMALYK 220
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 70
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 71 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 128
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HR+L N+LV N+ +KI DFGL + L P EY + WY
Sbjct: 129 EYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVL---PQDKEYYKVKEPGESPIFWY 185
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 186 -APESLTE-SKFSVASDVWSFGVVLYELFT 213
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 6/199 (3%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E + LE +G G+ G V+K + T ++VA+K + + E +E+ L + +
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
+ K + ++L+ I EY+ + R PF E +I + + ++L+GL ++H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGG-SALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 122 FHRDLKPENLLVT--NDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+K N+L++ DV K+ADFG+A +L+ + +V T ++ APEV +Q S+Y
Sbjct: 142 IHRDIKAANVLLSEQGDV-KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV-IQQSAYDS 199
Query: 179 AIDMWAVGAILAELFTLSP 197
D+W++G EL P
Sbjct: 200 KADIWSLGITAIELAKGEP 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 76
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 77 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 134
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 135 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 191
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 192 -APESLTE-SKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 72
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 73 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 187
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 188 -APESLTE-SKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 69
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 70 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 184
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 185 -APESLTE-SKFSVASDVWSFGVVLYELFT 212
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 135/325 (41%), Gaps = 49/325 (15%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
ERY+I+ LG+GT G V + + + K+ R + E L E+ L+K+ +
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL-EINVLKKIKEKD 109
Query: 62 ------IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQI-PFSEGEIRSFMSQMLQGLA 114
+ + + + + FE + N + ++E P+ +R Q+ L
Sbjct: 110 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 169
Query: 115 HMHRNGYFHRDLKPENLL--------------------VTNDVLKIADFGLARELSSMPP 154
+H N H DLKPEN+L V N +++ADFG A
Sbjct: 170 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEH 227
Query: 155 YTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
+T V+TR YR PEV+L+ P D+W++G IL E + +F + L + I
Sbjct: 228 HTTIVATRHYRPPEVILELGWAQPC-DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKI 286
Query: 215 LG----------------APDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAID 258
LG + E ++ R + + + L D + + + D
Sbjct: 287 LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQL--FD 344
Query: 259 LIWQLCSWDPLRRPTADQALQHPFF 283
L+ ++ +DP +R T +AL HPFF
Sbjct: 345 LMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 74
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 75 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 132
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 133 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 189
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 190 -APESLTE-SKFSVASDVWSFGVVLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 100
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 101 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 158
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 159 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 215
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 216 -APESLTE-SKFSVASDVWSFGVVLYELFT 243
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 67
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 68 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 125
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 126 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 182
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 183 -APESLTE-SKFSVASDVWSFGVVLYELFT 210
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 135/325 (41%), Gaps = 49/325 (15%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
ERY+I+ LG+GT G V + + + K+ R + E L E+ L+K+ +
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL-EINVLKKIKEKD 86
Query: 62 ------IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQI-PFSEGEIRSFMSQMLQGLA 114
+ + + + + FE + N + ++E P+ +R Q+ L
Sbjct: 87 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 146
Query: 115 HMHRNGYFHRDLKPENLL--------------------VTNDVLKIADFGLARELSSMPP 154
+H N H DLKPEN+L V N +++ADFG A
Sbjct: 147 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEH 204
Query: 155 YTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
+T V+TR YR PEV+L+ P D+W++G IL E + +F + L + I
Sbjct: 205 HTTIVATRHYRPPEVILELGWAQPC-DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKI 263
Query: 215 LG----------------APDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAID 258
LG + E ++ R + + + L D + + + D
Sbjct: 264 LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQL--FD 321
Query: 259 LIWQLCSWDPLRRPTADQALQHPFF 283
L+ ++ +DP +R T +AL HPFF
Sbjct: 322 LMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 68
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 69 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 126
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 127 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 183
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 184 -APESLTE-SKFSVASDVWSFGVVLYELFT 211
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 135/325 (41%), Gaps = 49/325 (15%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
ERY+I+ LG+GT G V + + + K+ R + E L E+ L+K+ +
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL-EINVLKKIKEKD 77
Query: 62 ------IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQI-PFSEGEIRSFMSQMLQGLA 114
+ + + + + FE + N + ++E P+ +R Q+ L
Sbjct: 78 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 137
Query: 115 HMHRNGYFHRDLKPENLL--------------------VTNDVLKIADFGLARELSSMPP 154
+H N H DLKPEN+L V N +++ADFG A
Sbjct: 138 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHEH 195
Query: 155 YTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
+T V+TR YR PEV+L+ P D+W++G IL E + +F + L + I
Sbjct: 196 HTTIVATRHYRPPEVILELGWAQPC-DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKI 254
Query: 215 LG----------------APDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAID 258
LG + E ++ R + + + L D + + + D
Sbjct: 255 LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQL--FD 312
Query: 259 LIWQLCSWDPLRRPTADQALQHPFF 283
L+ ++ +DP +R T +AL HPFF
Sbjct: 313 LMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 75
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 76 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 133
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 134 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 190
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 191 -APESLTE-SKFSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 69
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 70 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 184
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 185 -APESLTE-SKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 73
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 74 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 131
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 132 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 188
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 189 -APESLTE-SKFSVASDVWSFGVVLYELFT 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 87
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 88 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 202
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 203 -APESLTE-SKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 87
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L +++ + ++ + SQ+ +G+
Sbjct: 88 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 202
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 203 -APESLTE-SKFSVASDVWSFGVVLYELFT 230
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E + LE++G G+ G V+K + T ++VA+K + + E +E+ L + + P
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
+ K ++ +L+ I EY+ + E P E +I + + ++L+GL ++H
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKK 145
Query: 122 FHRDLKPENLLVT-NDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+K N+L++ + +K+ADFG+A +L+ + +V T ++ APEV+ Q S+Y
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ-SAYDSK 204
Query: 180 IDMWAVGAILAELFTLSP 197
D+W++G EL P
Sbjct: 205 ADIWSLGITAIELARGEP 222
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E + LE++G G+ G V+K + T ++VA+K + + E +E+ L + + P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
+ K ++ +L+ I EY+ + E P E +I + + ++L+GL ++H
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKK 140
Query: 122 FHRDLKPENLLVT-NDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+K N+L++ + +K+ADFG+A +L+ + +V T ++ APEV+ Q S+Y
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQ-SAYDSK 199
Query: 180 IDMWAVGAILAELFTLSP 197
D+W++G EL P
Sbjct: 200 ADIWSLGITAIELARGEP 217
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEV 68
++G+G+ G V A + ++VAVKKM + E + EV +R H N++++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 85
Query: 69 VRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLK 127
+EL+ + E++E L I+ ++ +E +I + +LQ L+ +H G HRD+K
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 143
Query: 128 PENLLVTND-VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAV 185
+++L+T+D +K++DFG ++S +P V T ++ APE L+ Y P +D+W++
Sbjct: 144 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSL 202
Query: 186 GAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPINL 245
G ++ E+ P + P A ++I + L NL
Sbjct: 203 GIMVIEMVDGEPPY---------------FNEPPLKAM-------KMIRDNLPPRLK-NL 239
Query: 246 SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ P+ + +L DP +R TA + L+HPF
Sbjct: 240 HKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEV 68
++G+G+ G V A + ++VAVKKM + E + EV +R H N++++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 94
Query: 69 VRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLK 127
+EL+ + E++E L I+ ++ +E +I + +LQ L+ +H G HRD+K
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 152
Query: 128 PENLLVTND-VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAV 185
+++L+T+D +K++DFG ++S +P V T ++ APE L+ Y P +D+W++
Sbjct: 153 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSL 211
Query: 186 GAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPINL 245
G ++ E+ P + P A ++I + L NL
Sbjct: 212 GIMVIEMVDGEPPY---------------FNEPPLKAM-------KMIRDNLPPRLK-NL 248
Query: 246 SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ P+ + +L DP +R TA + L+HPF
Sbjct: 249 HKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEV 68
++G+G+ G V A + ++VAVKKM + E + EV +R H N++++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 96
Query: 69 VRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLK 127
+EL+ + E++E L I+ ++ +E +I + +LQ L+ +H G HRD+K
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 154
Query: 128 PENLLVTND-VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAV 185
+++L+T+D +K++DFG ++S +P V T ++ APE L+ Y P +D+W++
Sbjct: 155 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSL 213
Query: 186 GAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPINL 245
G ++ E+ P + P A ++I + L NL
Sbjct: 214 GIMVIEMVDGEPPY---------------FNEPPLKAM-------KMIRDNLPPRLK-NL 250
Query: 246 SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ P+ + +L DP +R TA + L+HPF
Sbjct: 251 HKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEV 68
++G+G+ G V A + ++VAVKKM + E + EV +R H N++++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 139
Query: 69 VRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLK 127
+EL+ + E++E L I+ ++ +E +I + +LQ L+ +H G HRD+K
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 197
Query: 128 PENLLVTND-VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAV 185
+++L+T+D +K++DFG ++S +P V T ++ APE L+ Y P +D+W++
Sbjct: 198 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSL 256
Query: 186 GAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPINL 245
G ++ E+ P + P A ++I + L NL
Sbjct: 257 GIMVIEMVDGEPPY---------------FNEPPLKAM-------KMIRDNLPPRLK-NL 293
Query: 246 SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ P+ + +L DP +R TA + L+HPF
Sbjct: 294 HKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ +G G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EYM R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +K+ADFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEV 68
++G+G+ G V A + ++VAVKKM + E + EV +R H N++++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 89
Query: 69 VRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLK 127
+EL+ + E++E L I+ ++ +E +I + +LQ L+ +H G HRD+K
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 147
Query: 128 PENLLVTND-VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAV 185
+++L+T+D +K++DFG ++S +P V T ++ APE L+ Y P +D+W++
Sbjct: 148 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSL 206
Query: 186 GAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPINL 245
G ++ E+ P + P A ++I + L NL
Sbjct: 207 GIMVIEMVDGEPPY---------------FNEPPLKAM-------KMIRDNLPPRLK-NL 243
Query: 246 SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ P+ + +L DP +R TA + L+HPF
Sbjct: 244 HKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ +G G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EYM R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +K+ADFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 34/278 (12%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEV 68
++G+G+ G V A + ++VAVKKM + E + EV +R H N++++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL-FNEVVIMRDYQHENVVEMYNS 216
Query: 69 VRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLK 127
+EL+ + E++E L I+ ++ +E +I + +LQ L+ +H G HRD+K
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 274
Query: 128 PENLLVTND-VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAV 185
+++L+T+D +K++DFG ++S +P V T ++ APE L+ Y P +D+W++
Sbjct: 275 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSL 333
Query: 186 GAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPINL 245
G ++ E+ P + P A ++I + L NL
Sbjct: 334 GIMVIEMVDGEPPY---------------FNEPPLKAM-------KMIRDNLPPRLK-NL 370
Query: 246 SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ P+ + +L DP +R TA + L+HPF
Sbjct: 371 HKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E + LE++G G+ G V+K + T ++VA+K + + E +E+ L + + P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
+ K ++ +L+ I EY+ + E P E +I + + ++L+GL ++H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKK 125
Query: 122 FHRDLKPENLLVT-NDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+K N+L++ + +K+ADFG+A +L+ + +V T ++ APEV+ Q S+Y
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ-SAYDSK 184
Query: 180 IDMWAVGAILAELFTLSP 197
D+W++G EL P
Sbjct: 185 ADIWSLGITAIELARGEP 202
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E + LE++G G+ G V+K + T ++VA+K + + E +E+ L + + P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
+ K ++ +L+ I EY+ + E P E +I + + ++L+GL ++H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKK 125
Query: 122 FHRDLKPENLLVT-NDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+K N+L++ + +K+ADFG+A +L+ + +V T ++ APEV+ Q S+Y
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQ-SAYDSK 184
Query: 180 IDMWAVGAILAELFTLSP 197
D+W++G EL P
Sbjct: 185 ADIWSLGITAIELARGEP 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M + L+ LG GT G V T A+K ++++ ++ + E + L+
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER F+E R + ++++ L ++
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYL 126
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSS 174
H +RD+K ENL++ D +KI DFGL +E +S + T Y APEV L+ +
Sbjct: 127 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDN 185
Query: 175 SYSPAIDMWAVGAILAEL 192
Y A+D W +G ++ E+
Sbjct: 186 DYGRAVDWWGLGVVMYEM 203
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M + L+ LG GT G V T A+K ++++ ++ + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER F+E R + ++++ L ++
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYL 121
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSS 174
H +RD+K ENL++ D +KI DFGL +E +S + T Y APEV L+ +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDN 180
Query: 175 SYSPAIDMWAVGAILAEL 192
Y A+D W +G ++ E+
Sbjct: 181 DYGRAVDWWGLGVVMYEM 198
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 65
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S TE T Y PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTELCGTLDYLPPE-MIEGRMH 183
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 221
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 222 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF---WEECMNLREVKALRKL 57
M+RY LG G Y+ +++T E+ A K + + +E M+ E+ + L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST-EIAIHKSL 99
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
++P+++ +++ ++ + E + +R+ +E E R FM Q +QG+ ++H
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 118 RNGYFHRDLKPENLLVTNDV-LKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSS 175
N HRDLK NL + +D+ +KI DFGLA ++ + T Y APEVL +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK-KG 218
Query: 176 YSPAIDMWAVGAILAELFTLSPIF 199
+S +D+W++G IL L P F
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M + L+ LG GT G V T A+K ++++ ++ + E + L+
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER F+E R + ++++ L ++
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYL 124
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSS 174
H +RD+K ENL++ D +KI DFGL +E +S + T Y APEV L+ +
Sbjct: 125 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDN 183
Query: 175 SYSPAIDMWAVGAILAEL 192
Y A+D W +G ++ E+
Sbjct: 184 DYGRAVDWWGLGVVMYEM 201
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M + L+ LG GT G V T A+K ++++ ++ + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER F+E R + ++++ L ++
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYL 121
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSS 174
H +RD+K ENL++ D +KI DFGL +E +S + T Y APEV L+ +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDN 180
Query: 175 SYSPAIDMWAVGAILAEL 192
Y A+D W +G ++ E+
Sbjct: 181 DYGRAVDWWGLGVVMYEM 198
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M + L+ LG GT G V T A+K ++++ ++ + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER F+E R + ++++ L ++
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYL 121
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSS 174
H +RD+K ENL++ D +KI DFGL +E +S + T Y APEV L+ +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV-LEDN 180
Query: 175 SYSPAIDMWAVGAILAEL 192
Y A+D W +G ++ E+
Sbjct: 181 DYGRAVDWWGLGVVMYEM 198
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF---WEECMNLREVKALRKL 57
M+RY LG G Y+ +++T E+ A K + + +E M+ E+ + L
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST-EIAIHKSL 83
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
++P+++ +++ ++ + E + +R+ +E E R FM Q +QG+ ++H
Sbjct: 84 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 143
Query: 118 RNGYFHRDLKPENLLVTNDV-LKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSS 175
N HRDLK NL + +D+ +KI DFGLA ++ + T Y APEVL +
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK-KG 202
Query: 176 YSPAIDMWAVGAILAELFTLSPIF 199
+S +D+W++G IL L P F
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M + L+ LG GT G V T A+K ++++ ++ + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER F+E R + ++++ L ++
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYL 121
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSS 174
H +RD+K ENL++ D +KI DFGL +E +S + T Y APEV L+ +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDN 180
Query: 175 SYSPAIDMWAVGAILAEL 192
Y A+D W +G ++ E+
Sbjct: 181 DYGRAVDWWGLGVVMYEM 198
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M + L+ LG GT G V T A+K ++++ ++ + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER F+E R + ++++ L ++
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYL 121
Query: 117 HRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSS 174
H +RD+K ENL++ D +KI DFGL +E +S + T Y APEV L+ +
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV-LEDN 180
Query: 175 SYSPAIDMWAVGAILAEL 192
Y A+D W +G ++ E+
Sbjct: 181 DYGRAVDWWGLGVVMYEM 198
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L++LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 72
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I EY+ + +L ++ ++ + SQ+ +G+
Sbjct: 73 HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGM 130
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 187
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 188 -APESLTE-SKFSVASDVWSFGVVLYELFT 215
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 34/280 (12%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEV 68
++G+G+ G V A T + VAVKKM + E + EV +R +H N++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL-FNEVVIMRDYHHDNVVDMYSS 110
Query: 69 VRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLK 127
+EL+ + E++E L I+ ++ +E +I + +L+ L+++H G HRD+K
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 128 PENLLVTND-VLKIADFGLARELSS-MPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAV 185
+++L+T+D +K++DFG ++S +P V T ++ APEV + Y +D+W++
Sbjct: 169 SDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEV-ISRLPYGTEVDIWSL 227
Query: 186 GAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPINL 245
G ++ E+ I G P + P + R+ + LP +
Sbjct: 228 GIMVIEM---------------------IDGEPPYFNEPPLQAMRRI-----RDSLPPRV 261
Query: 246 SDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
D+ +S+ L L +P +R TA + L HPF +
Sbjct: 262 KDLHKVSSVLRGFLDLMLVR-EPSQRATAQELLGHPFLKL 300
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 30/210 (14%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLN 58
K L +LG G G C Y T E+VAVKK++ + EE + RE++ L+ L
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ---HSTEEHLRDFEREIEILKSLQ 72
Query: 59 HPNIIKLKEVV----RENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
H NI+K K V R N L I E++ + +L +++ + ++ + SQ+ +G+
Sbjct: 73 HDNIVKYKGVCYSAGRRN--LKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ Y HRDL N+LV N+ +KI DFGL + L P E + WY
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEXXKVKEPGESPIFWY 187
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + S +S A D+W+ G +L ELFT
Sbjct: 188 -APESLTE-SKFSVASDVWSFGVVLYELFT 215
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF---WEECMNLREVKALRKL 57
M+RY LG G Y+ +++T E+ A K + + +E M+ E+ + L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST-EIAIHKSL 99
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
++P+++ +++ ++ + E + +R+ +E E R FM Q +QG+ ++H
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 118 RNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYV-STRWYRAPEVLLQSSS 175
N HRDLK NL + +D+ +KI DFGLA ++ + + T Y APEVL +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCK-KG 218
Query: 176 YSPAIDMWAVGAILAELFTLSPIF 199
+S +D+W++G IL L P F
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF---WEECMNLREVKALRKL 57
M+RY LG G Y+ +++T E+ A K + + +E M+ E+ + L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST-EIAIHKSL 99
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
++P+++ +++ ++ + E + +R+ +E E R FM Q +QG+ ++H
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 118 RNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYV-STRWYRAPEVLLQSSS 175
N HRDLK NL + +D+ +KI DFGLA ++ + + T Y APEVL +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCK-KG 218
Query: 176 YSPAIDMWAVGAILAELFTLSPIF 199
+S +D+W++G IL L P F
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K +E L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENL++ +K+ DFGLA+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 113/213 (53%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ +G G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +K+ADFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 131/306 (42%), Gaps = 41/306 (13%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL----REVKALRKLNH 59
Y++ E +G G V + N ET + AVK + + ++ RE L H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPF--SEGEIRSFMSQMLQGLAH 115
P+I++L E + L+ +FE+M+ + I++ F SE +M Q+L+ L +
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 116 MHRNGYFHRDLKPENLLVTNDV----LKIADFGLARELS-SMPPYTEYVSTRWYRAPEVL 170
H N HRD+KP +L+ + +K+ FG+A +L S V T + APEV
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV- 206
Query: 171 LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNIS 230
++ Y +D+W G IL LS P ++L++
Sbjct: 207 VKREPYGKPVDVWGCGVIL--FILLSGCLPFYGTKERLFE-------------------- 244
Query: 231 RLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
+I Y ++ P S I S A DL+ ++ DP R T +AL HP+
Sbjct: 245 GIIKGKY-KMNPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYA 299
Query: 291 YPLHDP 296
Y +H P
Sbjct: 300 YKIHLP 305
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 131/306 (42%), Gaps = 41/306 (13%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNL----REVKALRKLNH 59
Y++ E +G G V + N ET + AVK + + ++ RE L H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPF--SEGEIRSFMSQMLQGLAH 115
P+I++L E + L+ +FE+M+ + I++ F SE +M Q+L+ L +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 116 MHRNGYFHRDLKPENLLVTNDV----LKIADFGLARELS-SMPPYTEYVSTRWYRAPEVL 170
H N HRD+KP +L+ + +K+ FG+A +L S V T + APEV
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV- 204
Query: 171 LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNIS 230
++ Y +D+W G IL LS P ++L++
Sbjct: 205 VKREPYGKPVDVWGCGVIL--FILLSGCLPFYGTKERLFE-------------------- 242
Query: 231 RLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
+I Y ++ P S I S A DL+ ++ DP R T +AL HP+
Sbjct: 243 GIIKGKY-KMNPRQWSHI----SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYA 297
Query: 291 YPLHDP 296
Y +H P
Sbjct: 298 YKIHLP 303
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 70
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T+ T Y PE +++ +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE-MIEGRMH 188
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 226
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 227 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 65
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T+ T Y PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE-MIEGRMH 183
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 221
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 222 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 65
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T+ T Y PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE-MIEGRMH 183
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 221
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 222 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 66
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T+ T Y PE +++ +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTDLCGTLDYLPPE-MIEGRMH 184
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 222
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 223 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 132/297 (44%), Gaps = 46/297 (15%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK-RKFYFWEECMNLREVKALRKLNHP 60
E Y++L +G G+ G K +I+ K++ E+ M + EV LR+L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 61 NIIKLKEVV--RENNELFFIFEYMEHN-----LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NI++ + + R N L+ + EY E + +ERQ E +R M+Q+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR-VMTQLTLAL 124
Query: 114 AHMHRNG-----YFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYT-EYVSTRWYRA 166
HR HRDLKP N+ + +K+ DFGLAR L+ + E+V T +Y +
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMS 184
Query: 167 PEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA 226
PE + SY+ D+W++G +L EL L P F TAF +
Sbjct: 185 PEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF---------------------TAFSQK 222
Query: 227 TNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
++ + I P SD E ++I ++ + RP+ ++ L++P
Sbjct: 223 ELAGKIREGKFRRI-PYRYSD-------ELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 91
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDYLPPE-MIEGRMH 209
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 247
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 248 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 137/298 (45%), Gaps = 58/298 (19%)
Query: 4 YKILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNH 59
Y++ E++G G+ C++KA N E + + + K KR E + LR H
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXE-FAVKIIDKSKRDPTEEIEIL-------LRYGQH 75
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
PNII LK+V + ++ + E + L I+R++ FSE E + + + + + ++H
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLH 133
Query: 118 RNGYFHRDLKPENLLVTN-----DVLKIADFGLARELSS------MPPYTEYVSTRWYRA 166
G HRDLKP N+L + + ++I DFG A++L + P YT + A
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN-----FVA 188
Query: 167 PEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA 226
PEV L+ Y A D+W++G +L T F PD T PE
Sbjct: 189 PEV-LERQGYDAACDIWSLGVLLYTXLTGYTPFA---------------NGPDDT--PEE 230
Query: 227 TNISRLISISYSEILPINLSDIIPNA-SMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
++R+ S +S LS N+ S A DL+ + DP +R TA L+HP+
Sbjct: 231 I-LARIGSGKFS------LSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 70
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 188
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 226
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 227 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 139/328 (42%), Gaps = 55/328 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
ERY+I+ LG+GT G V + + K+ + ++E L E+ L K+N +
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARL-EINVLEKINEKD 91
Query: 62 ------IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQ-IPFSEGEIRSFMSQMLQGLA 114
+++ + + + FE + + + +++ +P+ ++R Q+ Q +
Sbjct: 92 PDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVK 151
Query: 115 HMHRNGYFHRDLKPENLLVTND--------------------VLKIADFGLARELSSMPP 154
+H N H DLKPEN+L N +++ DFG A
Sbjct: 152 FLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA--TFDHEH 209
Query: 155 YTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
++ VSTR YRAPEV+L+ +S D+W++G I+ E + +F + L + I
Sbjct: 210 HSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERI 268
Query: 215 LG-------------------APDWTAFPEATNISRLISISYSEILPINLSDIIPNASME 255
LG DW E T+ R + + + S+ + +
Sbjct: 269 LGPIPSRMIRKTRKQKYFYRGRLDW---DENTSAGRYVRENCKPLRRYLTSEAEEHHQL- 324
Query: 256 AIDLIWQLCSWDPLRRPTADQALQHPFF 283
DLI + ++P +R T +ALQHPFF
Sbjct: 325 -FDLIESMLEYEPAKRLTLGEALQHPFF 351
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 65
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 183
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 221
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 222 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Query: 10 LGDGTCGCVYKAF---NVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
+G G G VYK + E+ VA+K +K + + L E + + +H NII+L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
+ V+ + + I EYME+ L +RE+ FS ++ + + G+ ++ Y HR
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR 171
Query: 125 DLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVS-----TRWYRAPEVLLQSSSYSP 178
DL N+LV +N V K++DFGL+R L P T S RW APE + ++
Sbjct: 172 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW-TAPEA-ISYRKFTS 229
Query: 179 AIDMWAVGAILAELFT 194
A D+W+ G ++ E+ T
Sbjct: 230 ASDVWSFGIVMWEVMT 245
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 16/222 (7%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK----RKFYFWEECMNLREVKALRKL 57
+RY++ E LG G V+ A ++ + VAVK ++ R F+ RE + L
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR--REAQNAAAL 69
Query: 58 NHPNIIKLKEVVRENNEL----FFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NHP I+ + + + + EY++ + + P + ++ Q L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 114 AHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELS----SMPPYTEYVSTRWYRAPE 168
H+NG HRD+KP N+L++ + +K+ DFG+AR ++ S+ + T Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
+ S D++++G +L E+ T P F GDS + Y+
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K +E L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENL++ +++ DFGLA+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 70
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 188
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 226
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 227 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 68
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 186
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 224
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 225 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 64
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 182
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 220
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 221 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 266
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 65
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTXLCGTLDYLPPE-MIEGRMH 183
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 221
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 222 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 69
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 187
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 225
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 226 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 271
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 82
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 200
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 238
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 239 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 284
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 46/297 (15%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK-RKFYFWEECMNLREVKALRKLNHP 60
E Y++L +G G+ G K +I+ K++ E+ M + EV LR+L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 61 NIIKLKEVV--RENNELFFIFEYMEHN-----LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NI++ + + R N L+ + EY E + +ERQ E +R M+Q+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR-VMTQLTLAL 124
Query: 114 AHMHRNG-----YFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTE-YVSTRWYRA 166
HR HRDLKP N+ + +K+ DFGLAR L+ + + +V T +Y +
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMS 184
Query: 167 PEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA 226
PE + SY+ D+W++G +L EL L P F TAF +
Sbjct: 185 PEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF---------------------TAFSQK 222
Query: 227 TNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
++ + I P SD E ++I ++ + RP+ ++ L++P
Sbjct: 223 ELAGKIREGKFRRI-PYRYSD-------ELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 10/218 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE---ECMNLREVKALRKL 57
+E +++ + LG G+ G V+ A +T + A+K +K+ + EC + +
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
HP + + + LFF+ EY+ +YHI + S + ++++ GL
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGLQF 134
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQS 173
+H G +RDLK +N+L+ D +KIADFG+ +E + E+ T Y APE+LL
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL-G 193
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKV 211
Y+ ++D W+ G +L E+ F G E + + +
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 46/297 (15%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK-RKFYFWEECMNLREVKALRKLNHP 60
E Y++L +G G+ G K +I+ K++ E+ M + EV LR+L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 61 NIIKLKEVV--RENNELFFIFEYMEHN-----LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NI++ + + R N L+ + EY E + +ERQ E +R M+Q+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR-VMTQLTLAL 124
Query: 114 AHMHRNG-----YFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTE-YVSTRWYRA 166
HR HRDLKP N+ + +K+ DFGLAR L+ + + +V T +Y +
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 184
Query: 167 PEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA 226
PE + SY+ D+W++G +L EL L P F TAF +
Sbjct: 185 PEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF---------------------TAFSQK 222
Query: 227 TNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
++ + I P SD E ++I ++ + RP+ ++ L++P
Sbjct: 223 ELAGKIREGKFRRI-PYRYSD-------ELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M ++ L+ LG GT G V T A+K +K++ ++ L E + L+
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER FSE R + ++++ L ++
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYL 124
Query: 117 H-RNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQS 173
H +RDLK ENL++ D +KI DFGL +E + + T Y APEV L+
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LED 183
Query: 174 SSYSPAIDMWAVGAILAEL 192
+ Y A+D W +G ++ E+
Sbjct: 184 NDYGRAVDWWGLGVVMYEM 202
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M ++ L+ LG GT G V T A+K +K++ ++ L E + L+
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER FSE R + ++++ L ++
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYL 126
Query: 117 H-RNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQS 173
H +RDLK ENL++ D +KI DFGL +E + + T Y APEV L+
Sbjct: 127 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LED 185
Query: 174 SSYSPAIDMWAVGAILAEL 192
+ Y A+D W +G ++ E+
Sbjct: 186 NDYGRAVDWWGLGVVMYEM 204
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 70
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE + + +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPEXI-EGRXH 188
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 226
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 227 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPXLREVLEHPWITANSSKP 272
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 135/321 (42%), Gaps = 58/321 (18%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 66
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S TE T +Y AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAP 186
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
EV L Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 187 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 246 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 276
Query: 281 PFFNVETWVP-YPLHDPLELR 300
P+ T VP PLH L+
Sbjct: 277 PWIMQSTKVPQTPLHTSRVLK 297
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WTLCGTPEYLAPEIIL-SKGYN 202
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 203 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 234
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M ++ L+ LG GT G V T A+K +K++ ++ L E + L+
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER FSE R + ++++ L ++
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYL 125
Query: 117 H-RNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQS 173
H +RDLK ENL++ D +KI DFGL +E + + T Y APEV L+
Sbjct: 126 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LED 184
Query: 174 SSYSPAIDMWAVGAILAEL 192
+ Y A+D W +G ++ E+
Sbjct: 185 NDYGRAVDWWGLGVVMYEM 203
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENL++ +K+ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 66
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPS-SRRTTLSGTLDYLPPE-MIEGRMH 184
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 222
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 223 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 217
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF---WEECMNLREVKALRKLNHPNIIKLK 66
LG G ++ + +T E+ A K + + E M++ E+ R L H +++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 105
Query: 67 EVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDL 126
+N+ +F + E + +R+ +E E R ++ Q++ G ++HRN HRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 127 KPENLLVTNDV-LKIADFGLARELSSMPPYTEYV-STRWYRAPEVLLQSSSYSPAIDMWA 184
K NL + D+ +KI DFGLA ++ + + T Y APEVL +S +D+W+
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWS 224
Query: 185 VGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPIN 244
+G I+ L P F + C+ R+ YS +P +
Sbjct: 225 IGCIMYTLLVGKPPF----------ETSCL-----------KETYLRIKKNEYS--IPKH 261
Query: 245 LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
++ + A LI ++ DP RPT ++ L FF ++P
Sbjct: 262 INPV-------AASLIQKMLQTDPTARPTINELLNDEFFT-SGYIP 299
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WTLCGTPEYLAPEIIL-SKGYN 217
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 37/280 (13%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF---WEECMNLREVKALRKLNHPNIIKLK 66
LG G ++ + +T E+ A K + + E M++ E+ R L H +++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 107
Query: 67 EVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDL 126
+N+ +F + E + +R+ +E E R ++ Q++ G ++HRN HRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 127 KPENLLVTNDV-LKIADFGLARELSSMPPYTEYV-STRWYRAPEVLLQSSSYSPAIDMWA 184
K NL + D+ +KI DFGLA ++ + + T Y APEVL +S +D+W+
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWS 226
Query: 185 VGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPIN 244
+G I+ L P F + C+ R+ YS +P +
Sbjct: 227 IGCIMYTLLVGKPPF----------ETSCL-----------KETYLRIKKNEYS--IPKH 263
Query: 245 LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
++ + A LI ++ DP RPT ++ L FF
Sbjct: 264 INPV-------AASLIQKMLQTDPTARPTINELLNDEFFT 296
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 5 KILEELGDGTCGCVYKA-FNVETYEIV--AVKKMKRKFYFWEECMN--LREVKALRKLNH 59
++LE+LGDG+ G V + ++ + + V AVK +K E M+ +REV A+ L+H
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
N+I+L VV +L +R+ Q F G + + Q+ +G+ ++
Sbjct: 81 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 140
Query: 120 GYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYR-------APEVLL 171
+ HRDL NLL+ T D++KI DFGL R ++P ++ + +R APE L
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHXVMQEHRKVPFAWCAPES-L 196
Query: 172 QSSSYSPAIDMWAVGAILAELFT 194
++ ++S A D W G L E+FT
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 91
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S + T Y PE +++ +
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RDDLCGTLDYLPPE-MIEGRMH 209
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 247
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 248 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 68
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S + T Y PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRDDLCGTLDYLPPE-MIEGRMH 186
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 224
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 225 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 5 KILEELGDGTCGCVYKA-FNVETYEIV--AVKKMKRKFYFWEECMN--LREVKALRKLNH 59
++LE+LGDG+ G V + ++ + + V AVK +K E M+ +REV A+ L+H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
N+I+L VV +L +R+ Q F G + + Q+ +G+ ++
Sbjct: 71 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 120 GYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYR-------APEVLL 171
+ HRDL NLL+ T D++KI DFGL R ++P ++ + +R APE L
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHXVMQEHRKVPFAWCAPES-L 186
Query: 172 QSSSYSPAIDMWAVGAILAELFT 194
++ ++S A D W G L E+FT
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 37/280 (13%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF---WEECMNLREVKALRKLNHPNIIKLK 66
LG G ++ + +T E+ A K + + E M++ E+ R L H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 83
Query: 67 EVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDL 126
+N+ +F + E + +R+ +E E R ++ Q++ G ++HRN HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 127 KPENLLVTNDV-LKIADFGLARELSSMPPYTEYV-STRWYRAPEVLLQSSSYSPAIDMWA 184
K NL + D+ +KI DFGLA ++ + + T Y APEVL +S +D+W+
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVDVWS 202
Query: 185 VGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPIN 244
+G I+ L P F + C+ R+ YS +P +
Sbjct: 203 IGCIMYTLLVGKPPF----------ETSCL-----------KETYLRIKKNEYS--IPKH 239
Query: 245 LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
++ + A LI ++ DP RPT ++ L FF
Sbjct: 240 INPV-------AASLIQKMLQTDPTARPTINELLNDEFFT 272
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 37/280 (13%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF---WEECMNLREVKALRKLNHPNIIKLK 66
LG G ++ + +T E+ A K + + E M++ E+ R L H +++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 87
Query: 67 EVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDL 126
+N+ +F + E + +R+ +E E R ++ Q++ G ++HRN HRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 127 KPENLLVTNDV-LKIADFGLARELSSMPPYTEYV-STRWYRAPEVLLQSSSYSPAIDMWA 184
K NL + D+ +KI DFGLA ++ + + T Y APEVL +S +D+W+
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVDVWS 206
Query: 185 VGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPIN 244
+G I+ L P F + C+ R+ YS +P +
Sbjct: 207 IGCIMYTLLVGKPPF----------ETSCL-----------KETYLRIKKNEYS--IPKH 243
Query: 245 LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
++ + A LI ++ DP RPT ++ L FF
Sbjct: 244 INPV-------AASLIQKMLQTDPTARPTINELLNDEFFT 276
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M ++ L+ LG GT G V T A+K +K++ ++ L E + L+
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER FSE R + ++++ L ++
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYL 264
Query: 117 H-RNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQS 173
H +RDLK ENL++ D +KI DFGL +E + + T Y APEV L+
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV-LED 323
Query: 174 SSYSPAIDMWAVGAILAEL 192
+ Y A+D W +G ++ E+
Sbjct: 324 NDYGRAVDWWGLGVVMYEM 342
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 37/280 (13%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF---WEECMNLREVKALRKLNHPNIIKLK 66
LG G ++ + +T E+ A K + + E M++ E+ R L H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 83
Query: 67 EVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDL 126
+N+ +F + E + +R+ +E E R ++ Q++ G ++HRN HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 127 KPENLLVTNDV-LKIADFGLARELSSMPPYTEYV-STRWYRAPEVLLQSSSYSPAIDMWA 184
K NL + D+ +KI DFGLA ++ + + T Y APEVL +S +D+W+
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-SKKGHSFEVDVWS 202
Query: 185 VGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPIN 244
+G I+ L P F + C+ R+ YS +P +
Sbjct: 203 IGCIMYTLLVGKPPF----------ETSCL-----------KETYLRIKKNEYS--IPKH 239
Query: 245 LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
++ + A LI ++ DP RPT ++ L FF
Sbjct: 240 INPV-------AASLIQKMLQTDPTARPTINELLNDEFFT 272
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 5 KILEELGDGTCGCVYKA-FNVETYEIV--AVKKMKRKFYFWEECMN--LREVKALRKLNH 59
++LE+LGDG+ G V + ++ + + V AVK +K E M+ +REV A+ L+H
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
N+I+L VV +L +R+ Q F G + + Q+ +G+ ++
Sbjct: 81 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 140
Query: 120 GYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYR-------APEVLL 171
+ HRDL NLL+ T D++KI DFGL R ++P ++ + +R APE L
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHYVMQEHRKVPFAWCAPES-L 196
Query: 172 QSSSYSPAIDMWAVGAILAELFT 194
++ ++S A D W G L E+FT
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 5 KILEELGDGTCGCVYKA-FNVETYEIV--AVKKMKRKFYFWEECMN--LREVKALRKLNH 59
++LE+LGDG+ G V + ++ + + V AVK +K E M+ +REV A+ L+H
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
N+I+L VV +L +R+ Q F G + + Q+ +G+ ++
Sbjct: 75 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 134
Query: 120 GYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYR-------APEVLL 171
+ HRDL NLL+ T D++KI DFGL R ++P ++ + +R APE L
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHYVMQEHRKVPFAWCAPES-L 190
Query: 172 QSSSYSPAIDMWAVGAILAELFT 194
++ ++S A D W G L E+FT
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 16/222 (7%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK----RKFYFWEECMNLREVKALRKL 57
+RY++ E LG G V+ A ++ + VAVK ++ R F+ RE + L
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR--REAQNAAAL 69
Query: 58 NHPNIIKLKEVVRENNEL----FFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NHP I+ + + + + EY++ + + P + ++ Q L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 114 AHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELS----SMPPYTEYVSTRWYRAPE 168
H+NG HRD+KP N++++ + +K+ DFG+AR ++ S+ + T Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
+ S D++++G +L E+ T P F GDS + Y+
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 66
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPE-MIEGRMH 184
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 222
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 223 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 23/204 (11%)
Query: 8 EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLNHPNIIKL 65
E LG G G K + ET E++ +K++ R F EE L+EVK +R L HPN++K
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLEHPNVLKF 72
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V+ ++ L FI EY++ L I++ + + SF + G+A++H HR
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 125 DLKPENLLVT-NDVLKIADFGLARELSSMPPYTE---------------YVSTRWYRAPE 168
DL N LV N + +ADFGLAR + E V ++ APE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 169 VLLQSSSYSPAIDMWAVGAILAEL 192
++ SY +D+++ G +L E+
Sbjct: 193 -MINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE--CMNLREVKALRKLN 58
M ++ L+ LG GT G V T A+K +K++ ++ L E + L+
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
HP + LK + ++ L F+ EY +H+ RER FSE R + ++++ L ++
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYL 267
Query: 117 H-RNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQS 173
H +RDLK ENL++ D +KI DFGL +E + + T Y APEV L+
Sbjct: 268 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV-LED 326
Query: 174 SSYSPAIDMWAVGAILAEL 192
+ Y A+D W +G ++ E+
Sbjct: 327 NDYGRAVDWWGLGVVMYEM 345
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 129/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A + I+A+K K + + E + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 65
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L ++ ++ I EY + ++ F E ++++++ L++ H
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T Y PE +++ +
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRAALCGTLDYLPPE-MIEGRMH 183
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ D ++ + ++T FP
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV----EFT-FP------------ 226
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 227 ----------DFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 38/289 (13%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF---WEECMNLREVKALRKLNHPNIIKLK 66
LG G ++ + +T E+ A K + + E M++ E+ R L H +++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGFH 81
Query: 67 EVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDL 126
+N+ +F + E + +R+ +E E R ++ Q++ G ++HRN HRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 127 KPENLLVTNDV-LKIADFGLARELSSMPPYTEYV-STRWYRAPEVLLQSSSYSPAIDMWA 184
K NL + D+ +KI DFGLA ++ + + T Y APEVL +S +D+W+
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-SKKGHSFEVDVWS 200
Query: 185 VGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSEILPIN 244
+G I+ L ++G P + R+ YS +P +
Sbjct: 201 IGCIMYTL---------------------LVGKPPFETSCLKETYLRIKKNEYS--IPKH 237
Query: 245 LSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVPYPL 293
++ + A LI ++ DP RPT ++ L FF ++P L
Sbjct: 238 INPV-------AASLIQKMLQTDPTARPTINELLNDEFFT-SGYIPARL 278
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V + ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 5 KILEELGDGTCGCVYKA-FNVETYEIV--AVKKMKRKFYFWEECMN--LREVKALRKLNH 59
++LE+LGDG+ G V + ++ + + V AVK +K E M+ +REV A+ L+H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
N+I+L VV +L +R+ Q F G + + Q+ +G+ ++
Sbjct: 71 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 120 GYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYR-------APEVLL 171
+ HRDL NLL+ T D++KI DFGL R ++P ++ + +R APE L
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHYVMQEHRKVPFAWCAPES-L 186
Query: 172 QSSSYSPAIDMWAVGAILAELFT 194
++ ++S A D W G L E+FT
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V + ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 68
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T Y PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRAALCGTLDYLPPE-MIEGRMH 186
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 224
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 225 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V + ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 16/222 (7%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK----RKFYFWEECMNLREVKALRKL 57
+RY++ E LG G V+ A ++ + VAVK ++ R F+ RE + L
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR--REAQNAAAL 69
Query: 58 NHPNIIKLKEVVRENNEL----FFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NHP I+ + + + + EY++ + + P + ++ Q L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 114 AHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELS----SMPPYTEYVSTRWYRAPE 168
H+NG HRD+KP N++++ + +K+ DFG+AR ++ S+ + T Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
+ S D++++G +L E+ T P F GDS + Y+
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 5 KILEELGDGTCGCVYKA-FNVETYEIV--AVKKMKRKFYFWEECMN--LREVKALRKLNH 59
++LE+LGDG+ G V + ++ + + V AVK +K E M+ +REV A+ L+H
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
N+I+L VV +L +R+ Q F G + + Q+ +G+ ++
Sbjct: 75 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 134
Query: 120 GYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYR-------APEVLL 171
+ HRDL NLL+ T D++KI DFGL R ++P ++ + +R APE L
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHYVMQEHRKVPFAWCAPES-L 190
Query: 172 QSSSYSPAIDMWAVGAILAELFT 194
++ ++S A D W G L E+FT
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 37/291 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 68
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 186
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 224
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
D + A DLI +L +P +RP + L+HP+ +
Sbjct: 225 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 51/313 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVK--------KMKRKFYFWEECMNLREVKA 53
E Y++++ +G G G V + T ++ A+K K +FWEE R++ A
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 129
Query: 54 LRKLNHPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSEGEIRSFMSQMLQG 112
N P +++L +++ L+ + EYM +L ++M +P E R + ++++
Sbjct: 130 F--ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP--EKWARFYTAEVVLA 185
Query: 113 LAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELS--SMPPYTEYVSTRWYRAPEV 169
L +H G+ HRD+KP+N+L+ LK+ADFG +++ M V T Y +PEV
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 170 LLQSSS---YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA 226
L Y D W+VG L E+ F DS + K I+ + FP+
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK---IMNHKNSLTFPDD 302
Query: 227 TNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLR--RPTADQALQHPFFN 284
+IS+ EA +LI + +R R ++ +H FF
Sbjct: 303 NDISK-----------------------EAKNLICAFLTDREVRLGRNGVEEIKRHLFFK 339
Query: 285 VETWVPYPLHDPL 297
+ W L D +
Sbjct: 340 NDQWAWETLRDTV 352
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 104/237 (43%), Gaps = 38/237 (16%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLNHP------- 60
LG G G V KA N A+KK++ EE ++ L EV L LNH
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 61 ------NIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
N +K V++ + LF EY E+ LY ++ + E Q+L+ L
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 114 AHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLAREL---------------SSMPPYTE 157
+++H G HRDLKP N+ + +KI DFGLA+ + S T
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 158 YVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
+ T Y A EVL + Y+ IDM+++G I E+ + P G ++ L K+ +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM--IYPFSTGMERVNILKKLRSV 244
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + EYME+ +L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGLAR
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLAR 195
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 245
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V + ET A+K + K+K ++ L E + L+ +N
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 209
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 210 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 241
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 5 KILEELGDGTCGCVYKA-FNVETYEIV--AVKKMKRKFYFWEECMN--LREVKALRKLNH 59
++LE+LGDG+ G V + ++ + + V AVK +K E M+ +REV A+ L+H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
N+I+L VV +L +R+ Q F G + + Q+ +G+ ++
Sbjct: 71 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 130
Query: 120 GYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYR-------APEVLL 171
+ HRDL NLL+ T D++KI DFGL R ++P ++ + +R APE L
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHYVMQEHRKVPFAWCAPES-L 186
Query: 172 QSSSYSPAIDMWAVGAILAELFT 194
++ ++S A D W G L E+FT
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 51/313 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVK--------KMKRKFYFWEECMNLREVKA 53
E Y++++ +G G G V + T ++ A+K K +FWEE R++ A
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 129
Query: 54 LRKLNHPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSEGEIRSFMSQMLQG 112
N P +++L +++ L+ + EYM +L ++M +P E R + ++++
Sbjct: 130 F--ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP--EKWARFYTAEVVLA 185
Query: 113 LAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELS--SMPPYTEYVSTRWYRAPEV 169
L +H G+ HRD+KP+N+L+ LK+ADFG +++ M V T Y +PEV
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 245
Query: 170 LLQSSS---YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA 226
L Y D W+VG L E+ F DS + K I+ + FP+
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK---IMNHKNSLTFPDD 302
Query: 227 TNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLR--RPTADQALQHPFFN 284
+IS+ EA +LI + +R R ++ +H FF
Sbjct: 303 NDISK-----------------------EAKNLICAFLTDREVRLGRNGVEEIKRHLFFK 339
Query: 285 VETWVPYPLHDPL 297
+ W L D +
Sbjct: 340 NDQWAWETLRDTV 352
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 51/313 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVK--------KMKRKFYFWEECMNLREVKA 53
E Y++++ +G G G V + T ++ A+K K +FWEE R++ A
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 124
Query: 54 LRKLNHPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSEGEIRSFMSQMLQG 112
N P +++L +++ L+ + EYM +L ++M +P E R + ++++
Sbjct: 125 F--ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVP--EKWARFYTAEVVLA 180
Query: 113 LAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELS--SMPPYTEYVSTRWYRAPEV 169
L +H G+ HRD+KP+N+L+ LK+ADFG +++ M V T Y +PEV
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEV 240
Query: 170 LLQSSS---YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA 226
L Y D W+VG L E+ F DS + K I+ + FP+
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK---IMNHKNSLTFPDD 297
Query: 227 TNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLR--RPTADQALQHPFFN 284
+IS+ EA +LI + +R R ++ +H FF
Sbjct: 298 NDISK-----------------------EAKNLICAFLTDREVRLGRNGVEEIKRHLFFK 334
Query: 285 VETWVPYPLHDPL 297
+ W L D +
Sbjct: 335 NDQWAWETLRDTV 347
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 104/237 (43%), Gaps = 38/237 (16%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLNHP------- 60
LG G G V KA N A+KK++ EE ++ L EV L LNH
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 61 ------NIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
N +K V++ + LF EY E+ LY ++ + E Q+L+ L
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 114 AHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLAREL---------------SSMPPYTE 157
+++H G HRDLKP N+ + +KI DFGLA+ + S T
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 158 YVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
+ T Y A EVL + Y+ IDM+++G I E+ + P G ++ L K+ +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM--IYPFSTGMERVNILKKLRSV 244
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 11/215 (5%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKR----KFYFWEECMNLREVKALRK 56
+++++ + LG G+ G V + ET A+K + + K E +N + ++ +
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQ--QA 98
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
+N P ++KL+ ++N+ L+ + EY R FSE R + +Q++ ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 117 HRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSS 175
H +RDLKPENLL+ +K+ADFG A+ + T Y APE++L S
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKG 215
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
Y+ A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V + ET A+K + K+K ++ L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY R FSE R + +Q++ ++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENL++ +K+ DFG A+ + T Y APE++L S Y+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 217
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKR------KFYFWEECMNLREVKALR 55
+RY++ E LG G V+ A ++ + VAVK ++ FY RE +
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR----REAQNAA 84
Query: 56 KLNHPNIIKLKEVVRENNEL----FFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQ 111
LNHP I+ + + + + EY++ + + P + ++ Q
Sbjct: 85 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELS----SMPPYTEYVSTRWYRA 166
L H+NG HRD+KP N++++ + +K+ DFG+AR ++ S+ + T Y +
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 167 PEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
PE + S D++++G +L E+ T P F GDS + Y+
Sbjct: 205 PE-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 247
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 67
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIA+FG + S T T Y PE +++ +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 185
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 223
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 224 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V + ET A+K + K+K ++ L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 217
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 13/215 (6%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE---ECMNLREVKALRKLNHP 60
+ L LG G+ G V A T E+ A+K +K+ + EC + E + L L+ P
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVEC-TMVEKRVLALLDKP 79
Query: 61 NII-KLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
+ +L + + L+F+ EY+ +YHI + + F E + + +++ GL +H
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIGLFFLH 137
Query: 118 RNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSSS 175
+ G +RDLK +N+++ ++ +KIADFG+ +E + E+ T Y APE++
Sbjct: 138 KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII-AYQP 196
Query: 176 YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
Y ++D WA G +L E+ P F G+ E D+L++
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQ 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V + ET A+K + K+K ++ L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 217
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V + ET A+K + K+K ++ L E + L+ +N
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 237
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 269
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V + ET A+K + K+K ++ L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 217
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 70
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T Y PE +++ +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRXXLXGTLDYLPPE-MIEGRMH 188
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 226
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 227 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 65
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T Y PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRAALCGTLDYLPPE-MIEGRMH 183
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 221
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 222 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P + KL+ ++N+ L+ + EY R FSE R + +Q++ ++H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENL++ +K+ DFG A+ + T Y APE++L S Y+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 217
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P + KL+ ++N+ L+ + EY R FSE R + +Q++ ++H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENL++ +K+ DFG A+ + T Y APE++L S Y+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 217
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E + I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLR-REVEIQSHL 69
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ +N LKIADFG + S T T Y PE +++ +
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 187
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI-LGAPDWTAFPEATNISRLISI 235
+D+W++G + E P F + + ++ + PD+ ISRL+
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKH 247
Query: 236 SYSEILPI 243
+ S+ L +
Sbjct: 248 NASQRLTL 255
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENL++ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 126/291 (43%), Gaps = 37/291 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A + I+A+K K + + E + REV+ L
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 62
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T T Y PE +++ +
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 180
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 218
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
D + A DLI +L +P +RP + L+HP+ +
Sbjct: 219 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANS 261
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 132/315 (41%), Gaps = 58/315 (18%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 112
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S T T +Y AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
EV L Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 233 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 291
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 292 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 322
Query: 281 PFFNVETWVPY-PLH 294
P+ T VP PLH
Sbjct: 323 PWIMQSTKVPQTPLH 337
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 67
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T Y PE +++ +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRXXLCGTLDYLPPE-MIEGRMH 185
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 223
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 224 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKR------KFYFWEECMNLREVKALR 55
+RY++ E LG G V+ A ++ + VAVK ++ FY RE +
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR----REAQNAA 67
Query: 56 KLNHPNIIKLKEVVRENNEL----FFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQ 111
LNHP I+ + + + EY++ + + P + ++ Q
Sbjct: 68 ALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELS----SMPPYTEYVSTRWYRA 166
L H+NG HRD+KP N++++ + +K+ DFG+AR ++ S+ + T Y +
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 167 PEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
PE + S D++++G +L E+ T P F GDS + Y+
Sbjct: 188 PE-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 72
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 73 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 190
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 229
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 65
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T Y PE +++ +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRXXLCGTLDYLPPE-MIEGRMH 183
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 221
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 222 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 68
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIA+FG + S T T Y PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPS-SRRTTLCGTLDYLPPE-MIEGRMH 186
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 224
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETWVP 290
D + A DLI +L +P +RP + L+HP+ + P
Sbjct: 225 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + EYME+ +L
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGL+R
Sbjct: 124 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 183
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 184 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 233
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 2 ERY-KILEELGDGTCGCV----YKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+RY K + +LG+G G V Y N T E+VAVK +K +E+ LR
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT 72
Query: 57 LNHPNIIKLKEVVRENNE--LFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
L H +IIK K + E L + EY+ +L + I ++ + F Q+ +G+
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ--LLLFAQQICEGM 130
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
A++H Y HR+L N+L+ ND ++KI DFGLA+ ++P EY R WY
Sbjct: 131 AYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWY 187
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + Y A D+W+ G L EL T
Sbjct: 188 -APECLKEYKFYY-ASDVWSFGVTLYELLT 215
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E + L+ +G G+ G VYK + T E+VA+K + + E +E+ L + + P
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY 121
I + ++ +L+ I EY+ + + P E I + + ++L+GL ++H
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGG-SALDLLKPGPLEETYIATILREILKGLDYLHSERK 137
Query: 122 FHRDLKPENLLVTNDV-LKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRD+K N+L++ +K+ADFG+A +L+ + +V T ++ APEV+ Q S+Y
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQ-SAYDFK 196
Query: 180 IDMWAVGAILAELFTLSP 197
D+W++G EL P
Sbjct: 197 ADIWSLGITAIELAKGEP 214
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 132/315 (41%), Gaps = 58/315 (18%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 118
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 119 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 178
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S T T +Y AP
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 238
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
EV L Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 239 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 297
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 298 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 328
Query: 281 PFFNVETWVPY-PLH 294
P+ T VP PLH
Sbjct: 329 PWIMQSTKVPQTPLH 343
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
++E+G G G V+ + + + VA+K ++ E+ + E + + KL+HP +++L
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEEDF--IEEAEVMMKLSHPKLVQL 67
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V E + +FE+MEH L +R ++ F+ + + +G+A++ HR
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHR 127
Query: 125 DLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSYSPAI 180
DL N LV N V+K++DFG+ R + YT T++ + +PEV S YS
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKS 185
Query: 181 DMWAVGAILAELFTLSPI 198
D+W+ G ++ E+F+ I
Sbjct: 186 DVWSFGVLMWEVFSEGKI 203
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + EYME+ +L
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGL+R
Sbjct: 107 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 166
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 167 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 216
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 134/321 (41%), Gaps = 58/321 (18%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 72
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 73 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 132
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S T T +Y AP
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 192
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
EV L Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 193 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 251
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 252 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 282
Query: 281 PFFNVETWVPY-PLHDPLELR 300
P+ T VP PLH L+
Sbjct: 283 PWIMQSTKVPQTPLHTSRVLK 303
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 134/321 (41%), Gaps = 58/321 (18%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 73
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 74 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 133
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S T T +Y AP
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 193
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
EV L Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 194 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 252
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 253 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 283
Query: 281 PFFNVETWVPY-PLHDPLELR 300
P+ T VP PLH L+
Sbjct: 284 PWIMQSTKVPQTPLHTSRVLK 304
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R F E R + +Q++ ++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 217
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 134/321 (41%), Gaps = 58/321 (18%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 82
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 83 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 142
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S T T +Y AP
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 202
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
EV L Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 203 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 261
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 262 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 292
Query: 281 PFFNVETWVP-YPLHDPLELR 300
P+ T VP PLH L+
Sbjct: 293 PWIMQSTKVPQTPLHTSRVLK 313
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R F E R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLAGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 134/321 (41%), Gaps = 58/321 (18%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 74
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 75 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 134
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S T T +Y AP
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 194
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
EV L Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 195 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 253
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 254 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 284
Query: 281 PFFNVETWVP-YPLHDPLELR 300
P+ T VP PLH L+
Sbjct: 285 PWIMQSTKVPQTPLHTSRVLK 305
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 185
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 224
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R F E R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 104/210 (49%), Gaps = 24/210 (11%)
Query: 2 ERY-KILEELGDGTCGCV----YKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+RY K + +LG+G G V Y N T E+VAVK +K +E+ LR
Sbjct: 13 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT 72
Query: 57 LNHPNIIKLKEVVRENNE--LFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
L H +IIK K + E L + EY+ +L + I ++ + F Q+ +G+
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ--LLLFAQQICEGM 130
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
A++H Y HR+L N+L+ ND ++KI DFGLA+ ++P EY R WY
Sbjct: 131 AYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWY 187
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + Y A D+W+ G L EL T
Sbjct: 188 -APECLKEYKFYY-ASDVWSFGVTLYELLT 215
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY R F E R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENL++ +K+ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 8 EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIKLK 66
E +G G G VY+AF + V + + N+R E K L HPNII L+
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 67 EVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGY---F 122
V + L + E+ L ++ ++IP + ++ Q+ +G+ ++H
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIP--PDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 123 HRDLKPENLLV---------TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS 173
HRDLK N+L+ +N +LKI DFGLARE + + W APEV +++
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWM-APEV-IRA 188
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVC 212
S +S D+W+ G +L EL T F G + Y V
Sbjct: 189 SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA 227
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 132/315 (41%), Gaps = 58/315 (18%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 68
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S T T +Y AP
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
EV L Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 189 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 248 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 278
Query: 281 PFFNVETWVP-YPLH 294
P+ T VP PLH
Sbjct: 279 PWIMQSTKVPQTPLH 293
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + +T T Y APE++L S Y+
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-ATWT-LCGTPEYLAPEIIL-SKGYN 237
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 269
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 134/321 (41%), Gaps = 58/321 (18%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 67
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 68 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 127
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S T T +Y AP
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 187
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
EV L Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 188 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 246
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 247 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 277
Query: 281 PFFNVETWVP-YPLHDPLELR 300
P+ T VP PLH L+
Sbjct: 278 PWIMQSTKVPQTPLHTSRVLK 298
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 185
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 224
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 134/321 (41%), Gaps = 58/321 (18%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 68
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S T T +Y AP
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
EV L Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 189 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 248 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 278
Query: 281 PFFNVETWVP-YPLHDPLELR 300
P+ T VP PLH L+
Sbjct: 279 PWIMQSTKVPQTPLHTSRVLK 299
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + EYME+ +L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGL+R
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 245
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 134/321 (41%), Gaps = 58/321 (18%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 66
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 67 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S T T +Y AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 186
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
EV L Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 187 EV-LGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 246 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 276
Query: 281 PFFNVETWVP-YPLHDPLELR 300
P+ T VP PLH L+
Sbjct: 277 PWIMQSTKVPQTPLHTSRVLK 297
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + EYME+ +L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGL R
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGR 195
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + EYME+ +L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGL+R
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + EYME+ +L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGL+R
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + EYME+ +L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGL+R
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 245
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 59/303 (19%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEEC-MNLREVKALRKLN-HPNIIKLKE 67
LG G+ G V + + VAVK+M F C + L E+K L + + HPN+I+
Sbjct: 41 LGYGSSGTVVFQGSFQG-RPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYC 94
Query: 68 VVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIR------SFMSQMLQGLAHMHRNGY 121
+ L+ E NL ++ + + +++ S + Q+ G+AH+H
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI 154
Query: 122 FHRDLKPENLLVT--------------NDVLKIADFGLARELSSMPPYTEY-----VSTR 162
HRDLKP+N+LV+ N + I+DFGL ++L S T
Sbjct: 155 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTS 214
Query: 163 WYRAPEVLLQSSS--YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDW 220
+RAPE+L +S+ + +ID++++G + Y + P
Sbjct: 215 GWRAPELLEESTKRRLTRSIDIFSMGCV-------------------FYYILSKGKHPFG 255
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ +NI R I S E+ ++ +I EA DLI Q+ DPL+RPTA + L+H
Sbjct: 256 DKYSRESNIIRGI-FSLDEMKCLHDRSLIA----EATDLISQMIDHDPLKRPTAMKVLRH 310
Query: 281 PFF 283
P F
Sbjct: 311 PLF 313
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + EYME+ +L
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGL+R
Sbjct: 134 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 193
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 194 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 243
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 72
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 190
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 229
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
++E+G G G V+ + + + VA+K ++ E+ + E + + KL+HP +++L
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQL 65
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V E + +FE+MEH L +R ++ F+ + + +G+A++ HR
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 125
Query: 125 DLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSYSPAI 180
DL N LV N V+K++DFG+ R + YT T++ + +PEV S YS
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKS 183
Query: 181 DMWAVGAILAELFTLSPI 198
D+W+ G ++ E+F+ I
Sbjct: 184 DVWSFGVLMWEVFSEGKI 201
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 16/219 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY + VAVK +K EE L+E ++++
Sbjct: 29 MERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 86
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + + EYM + NL +RE + +M +Q+ + ++
Sbjct: 87 HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N V+K+ADFGL+R L + YT + ++ + APE L
Sbjct: 147 EKKNFIHRDLAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 204
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLY 209
+++S D+WA G +L E+ T +SP +PG ++ Q+Y
Sbjct: 205 YNTFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVY 241
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 59/303 (19%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEEC-MNLREVKALRKLN-HPNIIKLKE 67
LG G+ G V + + VAVK+M F C + L E+K L + + HPN+I+
Sbjct: 41 LGYGSSGTVVFQGSFQG-RPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYC 94
Query: 68 VVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIR------SFMSQMLQGLAHMHRNGY 121
+ L+ E NL ++ + + +++ S + Q+ G+AH+H
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI 154
Query: 122 FHRDLKPENLLVT--------------NDVLKIADFGLARELSSMPPYTEY-----VSTR 162
HRDLKP+N+LV+ N + I+DFGL ++L S T
Sbjct: 155 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTS 214
Query: 163 WYRAPEVLLQSSS--YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDW 220
+RAPE+L +S+ + +ID++++G + Y + P
Sbjct: 215 GWRAPELLEESTKRRLTRSIDIFSMGCV-------------------FYYILSKGKHPFG 255
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ +NI R I S E+ ++ +I EA DLI Q+ DPL+RPTA + L+H
Sbjct: 256 DKYSRESNIIRGI-FSLDEMKCLHDRSLIA----EATDLISQMIDHDPLKRPTAMKVLRH 310
Query: 281 PFF 283
P F
Sbjct: 311 PLF 313
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE----CMNLREVKALRKLNH 59
+ L+ +G G+ G V A + AVK +++K ++ M+ R V L+ + H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVKH 98
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
P ++ L + ++L+F+ +Y+ YH+ RER F E R + +++ L ++H
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC--FLEPRARFYAAEIASALGYLH 156
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSSS 175
+RDLKPEN+L+ + + + DFGL +E + + + T Y APEV L
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV-LHKQP 215
Query: 176 YSPAIDMWAVGAILAE-LFTLSPIF 199
Y +D W +GA+L E L+ L P +
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPFY 240
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 203
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 204 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 235
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
++E+G G G V+ + + + VA+K ++ E+ + E + + KL+HP +++L
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQL 67
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V E + +FE+MEH L +R ++ F+ + + +G+A++ HR
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 127
Query: 125 DLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSYSPAI 180
DL N LV N V+K++DFG+ R + YT T++ + +PEV S YS
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKS 185
Query: 181 DMWAVGAILAELFTLSPI 198
D+W+ G ++ E+F+ I
Sbjct: 186 DVWSFGVLMWEVFSEGKI 203
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
++E+G G G V+ + + + VA+K ++ E+ + E + + KL+HP +++L
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQL 70
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V E + +FE+MEH L +R ++ F+ + + +G+A++ HR
Sbjct: 71 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 130
Query: 125 DLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSYSPAI 180
DL N LV N V+K++DFG+ R + YT T++ + +PEV S YS
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKS 188
Query: 181 DMWAVGAILAELFTLSPI 198
D+W+ G ++ E+F+ I
Sbjct: 189 DVWSFGVLMWEVFSEGKI 206
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 7 LEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLK 66
++E+G G G V+ + + + VA+K +K E + E + + KL+HP +++L
Sbjct: 32 VQEIGSGQFGLVHLGYWLNK-DKVAIKTIKEGSM--SEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 67 EVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRD 125
V E + +FE+MEH L +R ++ F+ + + +G+A++ HRD
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 148
Query: 126 LKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSYSPAID 181
L N LV N V+K++DFG+ R + YT T++ + +PEV S YS D
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKSD 206
Query: 182 MWAVGAILAELFTLSPI 198
+W+ G ++ E+F+ I
Sbjct: 207 VWSFGVLMWEVFSEGKI 223
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLXGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 72
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 190
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 229
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 72
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 190
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 229
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 71
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 132 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 189
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 228
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 46/305 (15%)
Query: 4 YKILEEL-GDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL-NHPN 61
YK+ EL G+G V A +++ + AVK ++++ + REV+ L + + N
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV-FREVETLYQCQGNKN 72
Query: 62 IIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
I++L E ++ + +FE ++ L HI +++ F+E E + + L +H
Sbjct: 73 ILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFLHTK 130
Query: 120 GYFHRDLKPENLLVTN----DVLKIADFGLARELS--------SMPPYTEYVSTRWYRAP 167
G HRDLKPEN+L + +KI DF L + + P T + Y AP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 168 EVLL----QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEID------QLYKVCCILGA 217
EV+ Q++ Y D+W++G +L + + P F G D ++ +VC
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVC----- 245
Query: 218 PDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQA 277
+ I E + + I S EA DLI +L D +R +A Q
Sbjct: 246 --------QNKLFESIQEGKYEFPDKDWAHI----SSEAKDLISKLLVRDAKQRLSAAQV 293
Query: 278 LQHPF 282
LQHP+
Sbjct: 294 LQHPW 298
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 217
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E + I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLR-REVEIQSHL 69
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ +N LKIADFG + S T T Y PE +++ +
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPE-MIEGRMH 187
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI-LGAPDWTAFPEATNISRLISI 235
+D+W++G + E P F + + ++ + PD+ ISRL+
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKH 247
Query: 236 SYSEILPI 243
+ S+ L +
Sbjct: 248 NASQRLTL 255
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 185
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK----RKFYFWEECMNLREVKALRKL 57
+RY++ E LG G V+ A ++ + VAVK ++ R F+ RE + L
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR--REAQNAAAL 69
Query: 58 NHPNIIKLKEVVRENNEL----FFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
NHP I+ + + + + EY++ + + P + ++ Q L
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 114 AHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELS----SMPPYTEYVSTRWYRAPE 168
H+NG HRD+KP N++++ + +K+ DFG+AR ++ S+ + T Y +PE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS 203
+ S D++++G +L E+ T P F GDS
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V + ET A+K + K+K ++ L E + L+ +N
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R F E R + +Q++ ++H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 209
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 210 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 241
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADEPI-QIYE 248
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 185
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 224
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 185
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 224
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 67
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 185
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 224
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 37/291 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVK---KMKRKFYFWEECMNLREVKALRKL 57
+E ++I LG G G VY A ++ I+A+K K + + E + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR-REVEIQSHL 68
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
HPNI++L + ++ I EY + ++ F E ++++++ L++ H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 118 RNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRD+KPENLL+ + LKIADFG + S T Y PE +++ +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRXXLCGTLDYLPPE-MIEGRMH 186
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+W++G + E P F ++ + YK ISR+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANT-YQETYK-----------------RISRV---- 224
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVET 287
D + A DLI +L +P +RP + L+HP+ +
Sbjct: 225 -----EFTFPDFVTEG---ARDLISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 69
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 187
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 226
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 55/264 (20%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR----EVKALRKL 57
++Y + +G G+ G V A +T I A+K M + ++ EV+ ++KL
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEH-------NLY----------------------- 87
+HPNI +L EV + + + E N++
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 88 ---------HIMRERQIPFSEGE--IRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND 136
H RE + F + E I + M Q+ L ++H G HRD+KPEN L + +
Sbjct: 146 NEEAINGSIHGFRE-SLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN 204
Query: 137 V---LKIADFGLARELSSMP-----PYTEYVSTRWYRAPEVL-LQSSSYSPAIDMWAVGA 187
+K+ DFGL++E + T T ++ APEVL + SY P D W+ G
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 188 ILAELFTLSPIFPGDSEIDQLYKV 211
+L L + FPG ++ D + +V
Sbjct: 265 LLHLLLMGAVPFPGVNDADTISQV 288
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE---ECMNLREVKALRKL 57
+E + + + LG G+ G V+ A +T + A+K +K+ + EC + +
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
HP + + + LFF+ EY+ +YHI + S + ++++ GL
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGLQF 133
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQS 173
+H G +RDLK +N+L+ D +KIADFG+ +E + + T Y APE+LL
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL-G 192
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKV 211
Y+ ++D W+ G +L E+ F G E + + +
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 69
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 187
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 226
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 23 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 80
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 81 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 140
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 141 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPES-LA 198
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 199 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 237
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPN+I L+ VV ++ + I E+ME+ +L
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ Y HRDL N+LV +N V K++DFGL+R
Sbjct: 124 FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSR 183
Query: 148 EL---SSMPPYTEYVS----TRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L +S P YT + RW APE +Q ++ A D+W+ G ++ E+ +
Sbjct: 184 FLEDDTSDPTYTSALGGKIPIRW-TAPEA-IQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
+++++ ++ LG G+ G V ++ET A+K + K+K ++ L E + L+ +N
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P + KL+ ++N+ L+ + EY R F E R + +Q++ ++H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENL++ +K+ DFG A+ + T Y APE++L S Y+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 217
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 249
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 173/380 (45%), Gaps = 49/380 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL---RKL 57
++ + +L +G G+ V +T I A+K +K++ +E ++ + + +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
NHP ++ L + + LFF+ EY+ ++H+ R+R++P E R + +++ L +
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--EEHARFYSAEISLALNY 121
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQS 173
+H G +RDLK +N+L+ ++ +K+ D+G+ +E L + + T Y APE+ L+
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI-LRG 180
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y ++D WA+G ++ E+ G S D I+G+ D P+ L
Sbjct: 181 EDYGFSVDWWALGVLMFEMMA------GRSPFD-------IVGSSDN---PDQNTEDYLF 224
Query: 234 SISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRR-----PTADQALQ-HPFFNVET 287
+ + + I S S++A ++ + DP R T +Q HPFF
Sbjct: 225 QVILEKQIRIPRS-----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 279
Query: 288 WVPYPLHDPLELRLNNMGSKPNL--ELNLWDFGTEPDDCFLGLTLAVKPSNLEMVHNVPQ 345
W D +E + KPN+ E L +F D F + + P + ++V + Q
Sbjct: 280 W------DMMEQKQVVPPFKPNISGEFGLDNF----DSQFTNEPVQLXPDDDDIVRKIDQ 329
Query: 346 GMQEDILFCSDLKDHSEQTV 365
E + + L +E++V
Sbjct: 330 SEFEGFEYINPLLMSAEESV 349
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 63/307 (20%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEEC-MNLREVKALRKLN-HPNIIKLKE 67
LG G+ G V + + VAVK+M F C + L E+K L + + HPN+I+
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYC 76
Query: 68 VVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIR------SFMSQMLQGLAHMHRNGY 121
+ L+ E NL ++ + + +++ S + Q+ G+AH+H
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI 136
Query: 122 FHRDLKPENLLVT--------------NDVLKIADFGLARELSSMPPYTEY-----VSTR 162
HRDLKP+N+LV+ N + I+DFGL ++L S T
Sbjct: 137 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTS 196
Query: 163 WYRAPEVLLQSSS------YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILG 216
+RAPE+L +S++ + +ID++++G + Y +
Sbjct: 197 GWRAPELLEESNNLQTKRRLTRSIDIFSMGCV-------------------FYYILSKGK 237
Query: 217 APDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQ 276
P + +NI R I S E+ ++ +I EA DLI Q+ DPL+RPTA +
Sbjct: 238 HPFGDKYSRESNIIRGI-FSLDEMKCLHDRSLIA----EATDLISQMIDHDPLKRPTAMK 292
Query: 277 ALQHPFF 283
L+HP F
Sbjct: 293 VLRHPLF 299
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ ++ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYQMAAGYPPFFADQPI-QIYE 248
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 63/307 (20%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEEC-MNLREVKALRKLN-HPNIIKLKE 67
LG G+ G V + + VAVK+M F C + L E+K L + + HPN+I+
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYC 76
Query: 68 VVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIR------SFMSQMLQGLAHMHRNGY 121
+ L+ E NL ++ + + +++ S + Q+ G+AH+H
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI 136
Query: 122 FHRDLKPENLLVT--------------NDVLKIADFGLARELSSMPPYTEY-----VSTR 162
HRDLKP+N+LV+ N + I+DFGL ++L S T
Sbjct: 137 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTS 196
Query: 163 WYRAPEVLLQSSS------YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILG 216
+RAPE+L +S++ + +ID++++G + Y +
Sbjct: 197 GWRAPELLEESNNLQTKRRLTRSIDIFSMGCV-------------------FYYILSKGK 237
Query: 217 APDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQ 276
P + +NI R I S E+ ++ +I EA DLI Q+ DPL+RPTA +
Sbjct: 238 HPFGDKYSRESNIIRGI-FSLDEMKCLHDRSLIA----EATDLISQMIDHDPLKRPTAMK 292
Query: 277 ALQHPFF 283
L+HP F
Sbjct: 293 VLRHPLF 299
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R F+E R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + EYME+ +L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ G+ HRDL N+L+ +N V K++DFGL+R
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 245
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 2 ERY-KILEELGDGTCGCV----YKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+RY K + +LG+G G V Y N T E+VAVK +K RE++ LR
Sbjct: 8 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT 67
Query: 57 LNHPNIIKLKEVVRENNE--LFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
L H +I+K K + E + + EY+ R ++ F Q+ +G+A
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMA 126
Query: 115 HMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WYR 165
++H Y HR L N+L+ ND ++KI DFGLA+ ++P EY R WY
Sbjct: 127 YLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWY- 182
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + Y A D+W+ G L EL T
Sbjct: 183 APECLKECKFYY-ASDVWSFGVTLYELLT 210
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 274
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 275 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HR+L N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 335 EKKNFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 393
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 394 -NKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 431
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 2 ERY-KILEELGDGTCGCV----YKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+RY K + +LG+G G V Y N T E+VAVK +K RE++ LR
Sbjct: 7 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT 66
Query: 57 LNHPNIIKLKEVVRENNE--LFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
L H +I+K K + E + + EY+ R ++ F Q+ +G+A
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMA 125
Query: 115 HMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WYR 165
++H Y HR L N+L+ ND ++KI DFGLA+ ++P EY R WY
Sbjct: 126 YLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWY- 181
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + Y A D+W+ G L EL T
Sbjct: 182 APECLKECKFYY-ASDVWSFGVTLYELLT 209
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 131/304 (43%), Gaps = 51/304 (16%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVK--------KMKRKFYFWEECMNLREVKA 53
E Y +++ +G G G V + + ++ A+K K +FWEE R++ A
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEE----RDIMA 130
Query: 54 LRKLNHPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSEGEIRSFMSQMLQG 112
N P +++L +++ L+ + EYM +L ++M +P E + + ++++
Sbjct: 131 F--ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVP--EKWAKFYTAEVVLA 186
Query: 113 LAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAREL--SSMPPYTEYVSTRWYRAPEV 169
L +H G HRD+KP+N+L+ + LK+ADFG ++ + M V T Y +PEV
Sbjct: 187 LDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEV 246
Query: 170 LLQSSS---YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEA 226
L Y D W+VG L E+ F DS + K I+ + FPE
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK---IMDHKNSLCFPED 303
Query: 227 TNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLR--RPTADQALQHPFFN 284
IS+ A +LI + +R R ++ QHPFF
Sbjct: 304 AEISK-----------------------HAKNLICAFLTDREVRLGRNGVEEIKQHPFFK 340
Query: 285 VETW 288
+ W
Sbjct: 341 NDQW 344
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 172/380 (45%), Gaps = 49/380 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL---RKL 57
++ + +L +G G+ V +T I A+K +K++ +E ++ + + +
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
NHP ++ L + + LFF+ EY+ ++H+ R+R++P E R + +++ L +
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--EEHARFYSAEISLALNY 136
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQS 173
+H G +RDLK +N+L+ ++ +K+ D+G+ +E L + + T Y APE+ L+
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI-LRG 195
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y ++D WA+G ++ E+ G S D I+G+ D P+ L
Sbjct: 196 EDYGFSVDWWALGVLMFEMMA------GRSPFD-------IVGSSDN---PDQNTEDYLF 239
Query: 234 SISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRR-----PTADQALQ-HPFFNVET 287
+ + + I S S++A ++ + DP R T +Q HPFF
Sbjct: 240 QVILEKQIRIPRS-----MSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVD 294
Query: 288 WVPYPLHDPLELRLNNMGSKPNL--ELNLWDFGTEPDDCFLGLTLAVKPSNLEMVHNVPQ 345
W D +E + KPN+ E L +F D F + + P + ++V + Q
Sbjct: 295 W------DMMEQKQVVPPFKPNISGEFGLDNF----DSQFTNERVQLXPDDDDIVRKIDQ 344
Query: 346 GMQEDILFCSDLKDHSEQTV 365
E + + L +E+ V
Sbjct: 345 SEFEGFEYINPLLMSAEECV 364
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R F E R + +Q++ ++H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 237
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 269
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENL++ +++ DFG A+ + T Y APE+++ S Y+
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIII-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R F E R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R F E R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R F E R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R F E R + +Q++ ++H
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y APE++L S Y+
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPEIIL-SKGYN 211
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 212 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 243
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 38/237 (16%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN--LREVKALRKLNHP------- 60
LG G G V KA N A+KK++ EE ++ L EV L LNH
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 61 ------NIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
N +K V++ + LF EY E+ LY ++ + E Q+L+ L
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 114 AHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLAREL---------------SSMPPYTE 157
+++H G HR+LKP N+ + +KI DFGLA+ + S T
Sbjct: 130 SYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 158 YVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
+ T Y A EVL + Y+ ID +++G I E + P G ++ L K+ +
Sbjct: 190 AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE--XIYPFSTGXERVNILKKLRSV 244
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 214 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 271
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 272 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HR+L N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 332 EKKNFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 390
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 391 -NKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 428
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 256 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 313
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 314 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HR+L N LV N ++K+ADFGL+R L + YT + ++ + APE L
Sbjct: 374 EKKNFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 432
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 433 -NKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 470
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T Y AP ++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEYLAPAIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 164/360 (45%), Gaps = 49/360 (13%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL---RKL 57
++ + +L +G G+ V +T I A+K +K++ +E ++ + + +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
NHP ++ L + + LFF+ EY+ ++H+ R+R++P E R + +++ L +
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--EEHARFYSAEISLALNY 125
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQS 173
+H G +RDLK +N+L+ ++ +K+ D+G+ +E L + + T Y APE+ L+
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI-LRG 184
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y ++D WA+G ++ E+ G S D I+G+ D P+ L
Sbjct: 185 EDYGFSVDWWALGVLMFEMMA------GRSPFD-------IVGSSDN---PDQNTEDYLF 228
Query: 234 SISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRR-----PTADQALQ-HPFFNVET 287
+ + + I S S++A ++ + DP R T +Q HPFF
Sbjct: 229 QVILEKQIRIPRS-----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 283
Query: 288 WVPYPLHDPLELRLNNMGSKPNL--ELNLWDFGTEPDDCFLGLTLAVKPSNLEMVHNVPQ 345
W D +E + KPN+ E L +F D F + + P + ++V + Q
Sbjct: 284 W------DMMEQKQVVPPFKPNISGEFGLDNF----DSQFTNEPVQLXPDDDDIVRKIDQ 333
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%), Gaps = 28/236 (11%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K+++ LG G G V+ + + + VAVK +K + L E ++ L H
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAF--LEEANLMKTLQHDK 69
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSEG------EIRSFMSQMLQGLA 114
+++L VV ++ I EYM + +L ++ EG ++ F +Q+ +G+A
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKS-----DEGGKVLLPKLIDFSAQIAEGMA 124
Query: 115 HMHRNGYFHRDLKPENLLVTNDVL-KIADFGLARELSSMPPYTEYVSTRW---YRAPEVL 170
++ R Y HRDL+ N+LV+ ++ KIADFGLAR + YT ++ + APE
Sbjct: 125 YIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEA- 182
Query: 171 LQSSSYSPAIDMWAVGAILAELFTLSPI-FPGDSEID------QLYKVCCILGAPD 219
+ ++ D+W+ G +L E+ T I +PG + D Q Y++ + PD
Sbjct: 183 INFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPD 238
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 137/314 (43%), Gaps = 39/314 (12%)
Query: 4 YKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL-NHPN 61
Y++ E+ LG+G V N+ T + AVK ++++ + REV+ L + H N
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-FREVEMLYQCQGHRN 72
Query: 62 IIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L E E + + +FE M L HI + R F+E E + + L +H
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNK 130
Query: 120 GYFHRDLKPENLLVT--NDV--LKIADFGLARELS--------SMPPYTEYVSTRWYRAP 167
G HRDLKPEN+L N V +KI DFGL + S P + Y AP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 168 EVL----LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAF 223
EV+ ++S Y D+W++G IL L + P F G D G A
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD--------CGWDRGEAC 242
Query: 224 PEATN-ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
P N + I E + + I S A DLI +L D +R +A Q LQHP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHI----SCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298
Query: 283 FNV---ETWVPYPL 293
E +P P+
Sbjct: 299 VQGCAPENTLPTPM 312
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 6/248 (2%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE--ECMNLREVKALRKLN 58
++ + I+ LG G G VY A + I+A+K + + E E RE++ L
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
HPNI+++ + ++ + E+ + ++ F E +FM ++ L + H
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
HRD+KPENLL+ LKIADFG + S+ T Y PE +++ ++
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-RRRXMCGTLDYLPPE-MIEGKTHD 190
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI-LGAPDWTAFPEATNISRLISIS 236
+D+W G + E P F S + ++ + L P + + IS+L+
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 237 YSEILPIN 244
+ LP+
Sbjct: 251 PPQRLPLK 258
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 92/172 (53%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + E ME+ +L
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGL+R
Sbjct: 107 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 166
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 167 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 216
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 7/199 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE----CMNLREVKALRK 56
M + + +G G G VY +T ++ A+K + +K ++ +N R + +L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 57 LNH-PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
P I+ + ++L FI + M H + FSE ++R + ++++ GL H
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 116 MHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSS 174
MH +RDLKP N+L+ + ++I+D GLA + S P+ V T Y APEVL +
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 366
Query: 175 SYSPAIDMWAVGAILAELF 193
+Y + D +++G +L +L
Sbjct: 367 AYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 7/199 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE----CMNLREVKALRK 56
M + + +G G G VY +T ++ A+K + +K ++ +N R + +L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 57 LNH-PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
P I+ + ++L FI + M H + FSE ++R + ++++ GL H
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 116 MHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSS 174
MH +RDLKP N+L+ + ++I+D GLA + S P+ V T Y APEVL +
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 366
Query: 175 SYSPAIDMWAVGAILAELF 193
+Y + D +++G +L +L
Sbjct: 367 AYDSSADWFSLGCMLFKLL 385
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 68
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 69 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT ++ + APE L
Sbjct: 129 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPES-LA 186
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 225
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 39/269 (14%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVV 69
LG G V++ + +T ++ A+K + + +RE + L+KLNH NI+KL +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 70 RENN--ELFFIFEYME-HNLYHIMRERQIPFS--EGEIRSFMSQMLQGLAHMHRNGYFHR 124
E I E+ +LY ++ E + E E + ++ G+ H+ NG HR
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 125 DLKPENLLVT-----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS------ 173
++KP N++ V K+ DFG AREL + T Y P++ ++
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDH 196
Query: 174 -SSYSPAIDMWAVGAILAELFTLS-PIFPGDS---EIDQLYKVCCILGAP---------- 218
Y +D+W++G T S P P + + +YK+ I G P
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPSGAISGVQKA 254
Query: 219 -----DWTA-FPEATNISRLISISYSEIL 241
DW+ P + ++SR + + + +L
Sbjct: 255 ENGPIDWSGDMPVSCSLSRGLQVLLTPVL 283
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 69
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + YT ++ + APE L
Sbjct: 130 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPES-LA 187
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 226
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 68
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 69 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + T + ++ + APE L
Sbjct: 129 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPES-LA 186
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 225
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 7/199 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE----CMNLREVKALRK 56
M + + +G G G VY +T ++ A+K + +K ++ +N R + +L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 57 LNH-PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
P I+ + ++L FI + M H + FSE ++R + ++++ GL H
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 116 MHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSS 174
MH +RDLKP N+L+ + ++I+D GLA + S P+ V T Y APEVL +
Sbjct: 308 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 366
Query: 175 SYSPAIDMWAVGAILAELF 193
+Y + D +++G +L +L
Sbjct: 367 AYDSSADWFSLGCMLFKLL 385
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 7/199 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEE----CMNLREVKALRK 56
M + + +G G G VY +T ++ A+K + +K ++ +N R + +L
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 57 LNH-PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
P I+ + ++L FI + M H + FSE ++R + ++++ GL H
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 306
Query: 116 MHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSS 174
MH +RDLKP N+L+ + ++I+D GLA + S P+ V T Y APEVL +
Sbjct: 307 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGV 365
Query: 175 SYSPAIDMWAVGAILAELF 193
+Y + D +++G +L +L
Sbjct: 366 AYDSSADWFSLGCMLFKLL 384
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 3 RYKILEELGDGTCGCV-YKAFNVETYEIV--AVKKMKRKFYFWEECMNLREVKALRKLNH 59
R I + +G G G V Y V V A+K +K + + L E + + +H
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109
Query: 60 PNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
PNII+L+ VV + EYME+ +L +R F+ ++ + + G+ ++
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVST------RWYRAPEVLL 171
GY HRDL N+LV +N V K++DFGL+R L P Y +T RW APE +
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAYTTTGGKIPIRWT-APEA-I 226
Query: 172 QSSSYSPAIDMWAVGAILAELFT 194
++S A D+W+ G ++ E+
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 6/247 (2%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE--ECMNLREVKALRKLN 58
++ ++I LG G G VY A +++ IVA+K + + E E RE++ L+
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
HPNI++L + ++ I EY + ++ F E + M ++ L + H
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 119 NGYFHRDLKPEN-LLVTNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
HRD+KPEN LL LKIADFG + S+ T T Y PE +++ ++
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT-MCGTLDYLPPE-MIEGRMHN 199
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI-LGAPDWTAFPEATNISRLISIS 236
+D+W +G + EL +P F S + ++ + L P IS+L+ +
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHN 259
Query: 237 YSEILPI 243
SE LP+
Sbjct: 260 PSERLPL 266
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 44/305 (14%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMK--RKFYFWEECMNLREVKALRK-L 57
+E +++L+ LG G G V+ + ++ + MK +K ++ + R+ L
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 58 NH----PNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQG 112
H P ++ L + +L I +Y+ L+ + +R+ F+E E++ ++ +++
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLA 171
Query: 113 LAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEY--VSTRWYRAPEV 169
L H+H+ G +RD+K EN+L+ +N + + DFGL++E + Y T Y AP++
Sbjct: 172 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 170 LLQS-SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
+ S + A+D W++G ++ EL T + F D E +
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS------------------QAE 273
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRR-----PTADQALQHPFF 283
ISR I + P +S + A DLI +L DP +R AD+ +H FF
Sbjct: 274 ISRRI-LKSEPPYPQEMSAL-------AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325
Query: 284 NVETW 288
W
Sbjct: 326 QKINW 330
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 39/269 (14%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVV 69
LG G V++ + +T ++ A+K + + +RE + L+KLNH NI+KL +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 70 RENN--ELFFIFEYME-HNLYHIMRERQIPFS--EGEIRSFMSQMLQGLAHMHRNGYFHR 124
E I E+ +LY ++ E + E E + ++ G+ H+ NG HR
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 125 DLKPENLLVT-----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQS------ 173
++KP N++ V K+ DFG AREL + T Y P++ ++
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDH 196
Query: 174 -SSYSPAIDMWAVGAILAELFTLS-PIFPGDS---EIDQLYKVCCILGAP---------- 218
Y +D+W++G T S P P + + +YK+ I G P
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPSGAISGVQKA 254
Query: 219 -----DWTA-FPEATNISRLISISYSEIL 241
DW+ P + ++SR + + + +L
Sbjct: 255 ENGPIDWSGDMPVSCSLSRGLQVLLTPVL 283
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 24/210 (11%)
Query: 2 ERY-KILEELGDGTCGCV----YKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+RY K + +LG+G G V Y N T E+VAVK +K +E+ LR
Sbjct: 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRT 89
Query: 57 LNHPNIIKLKEVVRENN--ELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
L H +IIK K + L + EY+ +L + I ++ + F Q+ +G+
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQ--LLLFAQQICEGM 147
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--------WY 164
A++H Y HRDL N+L+ ND ++KI DFGLA+ ++P E R WY
Sbjct: 148 AYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK---AVPEGHEXYRVREDGDSPVFWY 204
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + Y A D+W+ G L EL T
Sbjct: 205 -APECLKEYKFYY-ASDVWSFGVTLYELLT 232
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 92/172 (53%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + E ME+ +L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGL+R
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRW-TSPEAIAY-RKFTSASDVWSYGIVLWEVMS 245
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 15/211 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 65
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + +T + ++ + APE L
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPES-LA 183
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPG 201
+ +S D+WA G +L E+ T +SP +PG
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG 213
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 16/221 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 72
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + T + ++ + APE L
Sbjct: 133 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPES-LA 190
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPGDSEIDQLYKV 211
+ +S D+WA G +L E+ T +SP +PG ++ Q+Y++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG-IDLSQVYEL 229
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 65
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 66 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + T + ++ + APE L
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPES-LA 183
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPG 201
+ +S D+WA G +L E+ T +SP +PG
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG 213
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 172/380 (45%), Gaps = 49/380 (12%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL---RKL 57
++ + +L +G G+ V +T I A++ +K++ +E ++ + + +
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
NHP ++ L + + LFF+ EY+ ++H+ R+R++P E R + +++ L +
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--EEHARFYSAEISLALNY 168
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQS 173
+H G +RDLK +N+L+ ++ +K+ D+G+ +E L + + T Y APE+ L+
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI-LRG 227
Query: 174 SSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLI 233
Y ++D WA+G ++ E+ G S D I+G+ D P+ L
Sbjct: 228 EDYGFSVDWWALGVLMFEMMA------GRSPFD-------IVGSSDN---PDQNTEDYLF 271
Query: 234 SISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRR-----PTADQALQ-HPFFNVET 287
+ + + I S S++A ++ + DP R T +Q HPFF
Sbjct: 272 QVILEKQIRIPRS-----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 326
Query: 288 WVPYPLHDPLELRLNNMGSKPNL--ELNLWDFGTEPDDCFLGLTLAVKPSNLEMVHNVPQ 345
W D +E + KPN+ E L +F D F + + P + ++V + Q
Sbjct: 327 W------DMMEQKQVVPPFKPNISGEFGLDNF----DSQFTNEPVQLXPDDDDIVRKIDQ 376
Query: 346 GMQEDILFCSDLKDHSEQTV 365
E + + L +E+ V
Sbjct: 377 SEFEGFEYINPLLMSAEECV 396
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
++E+G G G V+ + + + VA+K ++ E+ + E + + KL+HP +++L
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQL 68
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V E + + E+MEH L +R ++ F+ + + +G+A++ HR
Sbjct: 69 YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 128
Query: 125 DLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSYSPAI 180
DL N LV N V+K++DFG+ R + YT T++ + +PEV S YS
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKS 186
Query: 181 DMWAVGAILAELFTLSPI 198
D+W+ G ++ E+F+ I
Sbjct: 187 DVWSFGVLMWEVFSEGKI 204
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEEC-MNLREVKALRKLN 58
++++ ++ LG G+ G V + E+ A+K + K+K ++ L E + L+ +N
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
P ++KL+ ++N+ L+ + EY+ R FSE R + +Q++ ++H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
+RDLKPENLL+ +++ DFG A+ + T APE++L S Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--WXLCGTPEALAPEIIL-SKGYN 216
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
A+D WA+G ++ E+ P F D I Q+Y+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE 248
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 93/174 (53%), Gaps = 11/174 (6%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPN+I L+ VV ++ + I E+ME+ +L
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ Y HR L N+LV +N V K++DFGL+R
Sbjct: 98 FLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSR 157
Query: 148 EL---SSMPPYTEYVS----TRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L +S P YT + RW APE +Q ++ A D+W+ G ++ E+ +
Sbjct: 158 FLEDDTSDPTYTSALGGKIPIRW-TAPEA-IQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
L+ELG G G V Y+ VA+K +K +E + E K + L+H +++L
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF--IEEAKVMMNLSHEKLVQL 84
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V + +F I EYM + L + +RE + F ++ + + + ++ + HR
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 125 DLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSYSPAI 180
DL N LV + V+K++DFGL+R + YT V +++ + PEVL+ S +S
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMY-SKFSSKS 202
Query: 181 DMWAVGAILAELFTLSPI 198
D+WA G ++ E+++L +
Sbjct: 203 DIWAFGVLMWEIYSLGKM 220
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 3 RYKILEELGDGTCGCV-YKAFNVETYEIV--AVKKMKRKFYFWEECMNLREVKALRKLNH 59
R I + +G G G V Y V V A+K +K + + L E + + +H
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109
Query: 60 PNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
PNII+L+ VV + EYME+ +L +R F+ ++ + + G+ ++
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 119 NGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVST-----RWYRAPEVLLQ 172
GY HRDL N+LV +N V K++DFGL+R L P + RW APE +
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT-APEA-IA 227
Query: 173 SSSYSPAIDMWAVGAILAELFT 194
++S A D+W+ G ++ E+
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLA 249
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
L+ELG G G V Y+ VA+K +K +E + E K + L+H +++L
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF--IEEAKVMMNLSHEKLVQL 68
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V + +F I EYM + L + +RE + F ++ + + + ++ + HR
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 128
Query: 125 DLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSYSPAI 180
DL N LV + V+K++DFGL+R + YT V +++ + PEVL+ S +S
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMY-SKFSSKS 186
Query: 181 DMWAVGAILAELFTLSPI 198
D+WA G ++ E+++L +
Sbjct: 187 DIWAFGVLMWEIYSLGKM 204
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E ME +L+ + ER E RSF Q+L+ +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 127
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 186
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 17/181 (9%)
Query: 21 AFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFE 80
A ++T ++ +K +R F L E + + +HPN++ L+ VV + + E
Sbjct: 73 AVAIKTLKVGYTEKQRRDF--------LCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIE 124
Query: 81 YMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVL 138
+ME+ L +R+ F+ ++ + + G+ ++ GY HRDL N+LV +N V
Sbjct: 125 FMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVC 184
Query: 139 KIADFGLARELSSMPP--YTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELF 193
K++DFGL+R + P YT + RW APE +Q ++ A D+W+ G ++ E+
Sbjct: 185 KVSDFGLSRVIEDDPEAVYTTTGGKIPVRW-TAPEA-IQYRKFTSASDVWSYGIVMWEVM 242
Query: 194 T 194
+
Sbjct: 243 S 243
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
L+ELG G G V Y+ VA+K +K +E + E K + L+H +++L
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF--IEEAKVMMNLSHEKLVQL 75
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V + +F I EYM + L + +RE + F ++ + + + ++ + HR
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 135
Query: 125 DLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSYSPAI 180
DL N LV + V+K++DFGL+R + YT V +++ + PEVL+ S +S
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMY-SKFSSKS 193
Query: 181 DMWAVGAILAELFTLSPI 198
D+WA G ++ E+++L +
Sbjct: 194 DIWAFGVLMWEIYSLGKM 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 6/248 (2%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE--ECMNLREVKALRKLN 58
++ + I LG G G VY A + I+A+K + + E E RE++ L
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
HPNI+++ + ++ + E+ + ++ F E +FM ++ L + H
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
HRD+KPENLL+ LKIADFG + S+ T Y PE +++ ++
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-RRRXMCGTLDYLPPE-MIEGKTHD 190
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI-LGAPDWTAFPEATNISRLISIS 236
+D+W G + E P F S + ++ + L P + + IS+L+
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 237 YSEILPIN 244
+ LP+
Sbjct: 251 PPQRLPLK 258
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
L+ELG G G V Y+ VA+K +K +E + E K + L+H +++L
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF--IEEAKVMMNLSHEKLVQL 69
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V + +F I EYM + L + +RE + F ++ + + + ++ + HR
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 125 DLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSYSPAI 180
DL N LV + V+K++DFGL+R + YT V +++ + PEVL+ S +S
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMY-SKFSSKS 187
Query: 181 DMWAVGAILAELFTLSPI 198
D+WA G ++ E+++L +
Sbjct: 188 DIWAFGVLMWEIYSLGKM 205
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 6/248 (2%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE--ECMNLREVKALRKLN 58
++ + I LG G G VY A + I+A+K + + E E RE++ L
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
HPNI+++ + ++ + E+ + ++ F E +FM ++ L + H
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 133
Query: 119 NGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYS 177
HRD+KPENLL+ LKIADFG + S+ T Y PE +++ ++
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-RRRXMCGTLDYLPPE-MIEGKTHD 191
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI-LGAPDWTAFPEATNISRLISIS 236
+D+W G + E P F S + ++ + L P + + IS+L+
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 251
Query: 237 YSEILPIN 244
+ LP+
Sbjct: 252 PPQRLPLK 259
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
L+ELG G G V Y+ VA+K +K +E + E K + L+H +++L
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF--IEEAKVMMNLSHEKLVQL 64
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V + +F I EYM + L + +RE + F ++ + + + ++ + HR
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 124
Query: 125 DLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSYSPAI 180
DL N LV + V+K++DFGL+R + YT V +++ + PEVL+ S +S
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMY-SKFSSKS 182
Query: 181 DMWAVGAILAELFTLSPI 198
D+WA G ++ E+++L +
Sbjct: 183 DIWAFGVLMWEIYSLGKM 200
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNVETYE-------IVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I EY + NL +R R+ P E ++ S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ Y + + R
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 223 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 271
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 137/345 (39%), Gaps = 74/345 (21%)
Query: 4 YKILEELGDGTCGCVYKA---FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL--- 57
+KI +++G+GT VY A V E +A+K + +R L+ L
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALK------HLIPTSHPIRIAAELQCLTVA 76
Query: 58 -NHPNIIKLKEVVRENNELFFIFEYMEHNLY-HIMRERQIPFSEGEIRSFMSQMLQGLAH 115
N++ +K R+N+ + Y+EH + I+ S E+R +M + + L
Sbjct: 77 GGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS----LSFQEVREYMLNLFKALKR 132
Query: 116 MHRNGYFHRDLKPENLLVTNDVLKIA--DFGLARE------------------------- 148
+H+ G HRD+KP N L + K A DFGLA+
Sbjct: 133 IHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK 192
Query: 149 ----LSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS-PIFPGDS 203
LS T +RAPEVL + + + AIDMW+ G I L + P +
Sbjct: 193 CSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252
Query: 204 EIDQLYKVCCILGAPDWTAFPEATNISRLISI---------------SYSEILPINLSDI 248
++ L ++ I G+ + + S L S P SDI
Sbjct: 253 DLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDI 312
Query: 249 IPNASM---------EAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
+A+ EA DL+ +L +P R TA++AL HPFF
Sbjct: 313 QGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFK 357
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNV-------ETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I EY + NL +R R+ P E ++ S
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ Y + + R
Sbjct: 209 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 268
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 269 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 317
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNVETYE-------IVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I EY + NL +R R+ P E ++ S
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ Y + + R
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 223 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 271
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 15/215 (6%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKR-KFYFW----EECMNLREVKALRKLN 58
Y++ LG G G V+ + VA+K + R + W + EV L K+
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 59 ----HPNIIKLKEVVRENNELFFIFE--YMEHNLYHIMRERQIPFSEGEIRSFMSQMLQG 112
HP +I+L + + E +L+ + E+ P EG R F Q++
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAA 151
Query: 113 LAHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL 170
+ H H G HRD+K EN+L+ K+ DFG L PYT++ TR Y PE +
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWI 210
Query: 171 LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ ++ +W++G +L ++ F D EI
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI 245
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN 58
MER I +LG G G VY+ + VAVK +K EE L+E ++++
Sbjct: 8 MERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF--LKEAAVMKEIK 65
Query: 59 HPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFM-SQMLQGLAHM 116
HPN+++L V + I E+M + NL +RE + +M +Q+ + ++
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 117 HRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQ 172
+ + HRDL N LV N ++K+ADFGL+R L + T + ++ + APE L
Sbjct: 126 EKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPES-LA 183
Query: 173 SSSYSPAIDMWAVGAILAELFT--LSPIFPG 201
+ +S D+WA G +L E+ T +SP +PG
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSP-YPG 213
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNVETYE-------IVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I EY + NL +R R+ P E ++ S
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ Y + + R
Sbjct: 155 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 214
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 215 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 263
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNV-------ETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I EY + NL +R R+ P E ++ S
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ Y + + R
Sbjct: 150 TYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 209
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 210 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 258
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNVETYE-------IVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I EY + NL +R R+ P E ++ S
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ Y + + R
Sbjct: 152 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 211
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 212 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 260
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNVETYE-------IVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I EY + NL +R R+ P E ++ S
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ Y + + R
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 223 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 271
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 115/232 (49%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNVETYE-------IVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I EY + NL +R R+ P E ++ S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ Y + R
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLP 222
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 223 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 271
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 14/204 (6%)
Query: 5 KILEELGDGTCGCVYKA---FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
KI E +G G G V + + VA+K +K + + L E + + HPN
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 62 IIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
II+L+ VV + + + E+ME+ L +R F+ ++ + + G+ ++
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS 136
Query: 121 YFHRDLKPENLLV-TNDVLKIADFGLAR---ELSSMPPYTEYVS----TRWYRAPEVLLQ 172
Y HRDL N+LV +N V K++DFGL+R E SS P YT + RW APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT-APEA-IA 194
Query: 173 SSSYSPAIDMWAVGAILAELFTLS 196
++ A D W+ G ++ E+ +
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFG 218
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 148/332 (44%), Gaps = 56/332 (16%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE---ECMNLREVKALRKL 57
+ +Y + + LG+G+ G V + + ET AVK +K+K E +E++ LR+L
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 58 NHPNIIKLKEVV--RENNELFFIFEYMEHNLYHIMR---ERQIPFSEGEIRSFMSQMLQG 112
H N+I+L +V+ E +++ + EY + ++ E++ P + + Q++ G
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAH--GYFCQLIDG 121
Query: 113 LAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTR------WYR 165
L ++H G H+D+KP NLL+ T LKI+ G+A L P+ + R ++
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH---PFAADDTCRTSQGSPAFQ 178
Query: 166 APEVLLQSSSYSP-AIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFP 224
PE+ ++S +D+W+ G L + T F GD+ +YK+ +G + A P
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN----IYKLFENIGKGSY-AIP 233
Query: 225 EATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFN 284
D P S DL+ + ++P +R + Q QH +F
Sbjct: 234 ---------------------GDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWFR 268
Query: 285 -----VETWVPYPLHDPLELRLNNMGSKPNLE 311
E VP P + R +M P LE
Sbjct: 269 KKHPPAEAPVPIPPSPDTKDRWRSMTVVPYLE 300
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 111/217 (51%), Gaps = 22/217 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++++LG G G V+ + + + VAVK +K + L E ++ L H
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAF--LEEANLMKTLQHDK 68
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSEG------EIRSFMSQMLQGLA 114
+++L VV + ++ I E+M + +L ++ EG ++ F +Q+ +G+A
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKS-----DEGGKVLLPKLIDFSAQIAEGMA 123
Query: 115 HMHRNGYFHRDLKPENLLVTNDVL-KIADFGLARELSSMPPYTEYVSTRW---YRAPEVL 170
++ R Y HRDL+ N+LV+ ++ KIADFGLAR + YT ++ + APE
Sbjct: 124 YIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEA- 181
Query: 171 LQSSSYSPAIDMWAVGAILAELFTLSPI-FPGDSEID 206
+ ++ ++W+ G +L E+ T I +PG + D
Sbjct: 182 INFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNAD 218
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 116/232 (50%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNVETYE-------IVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I EY + NL +R R+ P E ++ S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V++IADFGLAR+++++ Y + + R
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLP 222
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 223 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 271
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
L+ELG G G V Y+ VA+K +K +E + E K + L+H +++L
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF--IEEAKVMMNLSHEKLVQL 69
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V + +F I EYM + L + +RE + F ++ + + + ++ + HR
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 125 DLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW------YRAPEVLLQSSSYS 177
DL N LV + V+K++DFGL+R + EY S+R + PEVL+ S +S
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSRGSKFPVRWSPPEVLMY-SKFS 184
Query: 178 PAIDMWAVGAILAELFTLSPI 198
D+WA G ++ E+++L +
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKM 205
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 92/172 (53%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII L+ VV ++ + + EYME+ +L
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+++ F+ ++ + + G+ ++ GY HRDL N+L+ +N V K++DFGL+R
Sbjct: 113 FLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 172
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW APE + ++ A D+W+ G ++ E+ +
Sbjct: 173 VLEDDPEAAYTTRGGKIPIRW-TAPEA-IAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 136/314 (43%), Gaps = 39/314 (12%)
Query: 4 YKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL-NHPN 61
Y++ E+ LG+G V N+ T + AVK ++++ + REV+ L + H N
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-FREVEMLYQCQGHRN 72
Query: 62 IIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L E E + + +FE M L HI + R F+E E + + L +H
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNK 130
Query: 120 GYFHRDLKPENLLVT--NDV--LKIADFGLARELS--------SMPPYTEYVSTRWYRAP 167
G HRDLKPEN+L N V +KI DF L + S P + Y AP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 168 EVL----LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAF 223
EV+ ++S Y D+W++G IL L + P F G D G A
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD--------CGWDRGEAC 242
Query: 224 PEATN-ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
P N + I E + + I S A DLI +L D +R +A Q LQHP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHI----SCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298
Query: 283 FNV---ETWVPYPL 293
E +P P+
Sbjct: 299 VQGCAPENTLPTPM 312
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 8 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 64
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 65 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSS 175
Y HRDL+ N+LV++ + KIADFGLAR L YT ++ + APE + +
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEA-INYGT 181
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPYPG 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 75
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 76 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSS 175
Y HRDL+ N+LV++ + KIADFGLAR L YT ++ + APE + +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEA-INYGT 192
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 21/211 (9%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN----LREVKALRKL 57
E K++E LG G G V+ + + VAVK +K+ M+ L E +++L
Sbjct: 13 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQG------SMSPDAFLAEANLMKQL 65
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAH 115
H +++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A
Sbjct: 66 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLL 171
+ Y HRDL+ N+LV++ + KIADFGLAR L YT ++ + APE +
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEA-I 182
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPI-FPG 201
+++ D+W+ G +L E+ T I +PG
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 21/211 (9%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN----LREVKALRKL 57
E K++E LG G G V+ + + VAVK +K+ M+ L E +++L
Sbjct: 18 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQG------SMSPDAFLAEANLMKQL 70
Query: 58 NHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAH 115
H +++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A
Sbjct: 71 QHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 129
Query: 116 MHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLL 171
+ Y HRDL+ N+LV++ + KIADFGLAR L YT ++ + APE +
Sbjct: 130 IEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEA-I 187
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPI-FPG 201
+++ D+W+ G +L E+ T I +PG
Sbjct: 188 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 218
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E +L+ELG G G V Y+ VAVK +K +E +E + + KL+HP
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDEF--FQEAQTMMKLSHPK 64
Query: 62 IIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
++K V + ++ + EY+ + L + +R ++ + +G+A + +
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 121 YFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSSY 176
+ HRDL N LV D+ +K++DFG+ R + Y V T++ + APEV Y
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEV-FHYFKY 182
Query: 177 SPAIDMWAVGAILAELFTLSPI 198
S D+WA G ++ E+F+L +
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKM 204
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNL-REVKALRKLNH 59
+ ++IL +G G+ G V +T ++ A+K M K+K E N+ +E++ ++ L H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P ++ L ++ ++F + + + ++ + F E ++ F+ +++ L ++
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 120 GYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL--LQSSSY 176
HRD+KP+N+L+ + + I DF +A L T T+ Y APE+ + + Y
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGY 194
Query: 177 SPAIDMWAVGAILAELF 193
S A+D W++G EL
Sbjct: 195 SFAVDWWSLGVTAYELL 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 23 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 79
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 80 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSS 175
Y HRDL+ N+LV++ + KIADFGLAR L YT ++ + APE + +
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEA-INYGT 196
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIPYPG 223
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 12/202 (5%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
M+ K+L+ +G G G V VAVK +K L E + +L H
Sbjct: 11 MKELKLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHS 65
Query: 61 NIIKLKEV-VRENNELFFIFEYM-EHNLYHIMRERQIPFSEGE-IRSFMSQMLQGLAHMH 117
N+++L V V E L+ + EYM + +L +R R G+ + F + + + ++
Sbjct: 66 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 118 RNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
N + HRDL N+LV+ D V K++DFGL +E SS T + +W APE L+ +++
Sbjct: 126 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEA-LREAAF 182
Query: 177 SPAIDMWAVGAILAELFTLSPI 198
S D+W+ G +L E+++ +
Sbjct: 183 STKSDVWSFGILLWEIYSFGRV 204
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
K + +LG+G G C Y T E VAVK +K + +E++ LR L H
Sbjct: 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 61 NIIKLKEVVREN--NELFFIFEYM-EHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
NI+K K + E+ N + I E++ +L + + + + + + Q+ +G+ ++
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 118 RNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR-----WYRAPEVLL 171
Y HRDL N+LV ++ +KI DFGL + + + R WY APE L+
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLM 202
Query: 172 QSSSYSPAIDMWAVGAILAELFT 194
QS Y A D+W+ G L EL T
Sbjct: 203 QSKFYI-ASDVWSFGVTLHELLT 224
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNVETYE-------IVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I EY + NL +R R+ P E ++ S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ + + R
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 223 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 271
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII L+ VV + + I EYME+ +L
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ Y HRDL N+LV +N V K++DFG++R
Sbjct: 99 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 158
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW APE + ++ A D+W+ G ++ E+ +
Sbjct: 159 VLEDDPEAAYTTRGGKIPIRWT-APEAIAY-RKFTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII L+ VV + + I EYME+ +L
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ Y HRDL N+LV +N V K++DFG++R
Sbjct: 105 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR 164
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW APE + ++ A D+W+ G ++ E+ +
Sbjct: 165 VLEDDPEAAYTTRGGKIPIRWT-APEAIAY-RKFTSASDVWSYGIVMWEVMS 214
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII+L+ VV ++ + + E ME+ +L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ G HRDL N+L+ +N V K++DFGL+R
Sbjct: 136 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW +PE + ++ A D+W+ G +L E+ +
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWT-SPEAIAY-RKFTSASDVWSYGIVLWEVMS 245
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 7 LEELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
+ ++G+G G V++A E + +VAVK +K + + RE + + ++PN
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQI-----------------------PF 97
I+KL V + +FEYM + +L +R P
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 98 SEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPY- 155
S E Q+ G+A++ + HRDL N LV N V+KIADFGL+R + S Y
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 156 ---TEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
+ + RW PE + + Y+ D+WA G +L E+F+
Sbjct: 232 ADGNDAIPIRWM-PPESIFY-NRYTTESDVWAYGVVLWEIFS 271
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNVETYE-------IVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I EY + NL +R R+ P E ++ S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ + + R
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 223 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 271
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 5 KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
K + +LG+G G C Y T E VAVK +K + +E++ LR L H
Sbjct: 12 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 61 NIIKLKEVVREN--NELFFIFEYM-EHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
NI+K K + E+ N + I E++ +L + + + + + + Q+ +G+ ++
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 118 RNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR-----WYRAPEVLL 171
Y HRDL N+LV ++ +KI DFGL + + + R WY APE L+
Sbjct: 132 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLM 190
Query: 172 QSSSYSPAIDMWAVGAILAELFT 194
QS Y A D+W+ G L EL T
Sbjct: 191 QSKFYI-ASDVWSFGVTLHELLT 212
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 142
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 201
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 143
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 202
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 142
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 201
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 123
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 182
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 143
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 202
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 156
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 155
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 125/301 (41%), Gaps = 69/301 (22%)
Query: 10 LGDGTCGCVYKAFNVETYEI--------VAVKKMKRKFYFWEECMNLREVKALRKL-NHP 60
LG G G K N Y I VAVK +K K E + E+K + +L +H
Sbjct: 53 LGSGAFG---KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 61 NIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIR---------------- 103
NI+ L + ++ IFEY + +L + +R ++ FSE EI
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 104 ------SFMSQMLQGLAHMHRNGYFHRDLKPENLLVTN-DVLKIADFGLARELSSMPPYT 156
F Q+ +G+ + HRDL N+LVT+ V+KI DFGLAR++ S Y
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 157 EYVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCC 213
+ R + APE L + Y+ D+W+ G +L E+F+
Sbjct: 230 VRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFS------------------- 269
Query: 214 ILGAPDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLC-SWDPLRRP 272
LG + P N +LI + P + E I +I Q C ++D +RP
Sbjct: 270 -LGVNPYPGIPVDANFYKLIQNGFKMDQPF--------YATEEIYIIMQSCWAFDSRKRP 320
Query: 273 T 273
+
Sbjct: 321 S 321
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 155
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 143
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 202
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
L+ELG G G V Y+ VA+K +K +E + E K + L+H +++L
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF--IEEAKVMMNLSHEKLVQL 84
Query: 66 KEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
V + +F I EYM + L + +RE + F ++ + + + ++ + HR
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 125 DLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVS---TRWYRAPEVLLQSSSYSPAI 180
DL N LV + V+K++DFGL+R + + S RW PEVL+ S +S
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRW-SPPEVLMY-SKFSSKS 202
Query: 181 DMWAVGAILAELFTLSPI 198
D+WA G ++ E+++L +
Sbjct: 203 DIWAFGVLMWEIYSLGKM 220
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNVETYE-------IVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I Y + NL +R R+ P E ++ S
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ Y + + R
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 223 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 271
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 130/310 (41%), Gaps = 48/310 (15%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL-------QDCPKARREVELHWRAS 112
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E + +
Sbjct: 113 QCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGE 172
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +S T T +Y AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGAPDWTAFPE 225
EV L Y + D W++G I L P F + I K G + FP
Sbjct: 233 EV-LGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYE---FPN 288
Query: 226 ATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
+SE+ S E LI L +P +R T + HP+
Sbjct: 289 P---------EWSEV------------SEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQ 327
Query: 286 ETWVPY-PLH 294
T VP PLH
Sbjct: 328 STKVPQTPLH 337
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 127/307 (41%), Gaps = 62/307 (20%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNH-------PNI 62
LG G G V + F+ T + A+K + KA ++++H P+I
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLL------------YDSPKARQEVDHHWQASGGPHI 65
Query: 63 IKLKEVVRENNE----LFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQGLAHM 116
+ + +V + L I E ME L+ ++ER F+E E M + + +
Sbjct: 66 VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL 125
Query: 117 HRNGYFHRDLKPENLLVTND----VLKIADFGLARELS----SMPPYTEYVSTRWYRAPE 168
H + HRD+KPENLL T+ VLK+ DFG A+E + P YT Y Y APE
Sbjct: 126 HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVAPE 180
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
V L Y + DMW++G I+ L P F + T +
Sbjct: 181 V-LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN------------------TGQAISPG 221
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETW 288
+ R I + S++ S +A LI L DP R T Q + HP+ N
Sbjct: 222 MKRRIRLGQYGFPNPEWSEV----SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMV 277
Query: 289 VPY-PLH 294
VP PLH
Sbjct: 278 VPQTPLH 284
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 13 ETLKLVERLGAGQAGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 69
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 70 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVST---RWYRAPEVLLQSSS 175
Y HRDL+ N+LV++ + KIADFGLAR + + +W APE + +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW-TAPEA-INYGT 186
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 127/307 (41%), Gaps = 62/307 (20%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNH-------PNI 62
LG G G V + F+ T + A+K + KA ++++H P+I
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLL------------YDSPKARQEVDHHWQASGGPHI 84
Query: 63 IKLKEVVRENNE----LFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQGLAHM 116
+ + +V + L I E ME L+ ++ER F+E E M + + +
Sbjct: 85 VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL 144
Query: 117 HRNGYFHRDLKPENLLVTND----VLKIADFGLARELS----SMPPYTEYVSTRWYRAPE 168
H + HRD+KPENLL T+ VLK+ DFG A+E + P YT Y Y APE
Sbjct: 145 HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVAPE 199
Query: 169 VLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATN 228
V L Y + DMW++G I+ L P F + T +
Sbjct: 200 V-LGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN------------------TGQAISPG 240
Query: 229 ISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNVETW 288
+ R I + S++ S +A LI L DP R T Q + HP+ N
Sbjct: 241 MKRRIRLGQYGFPNPEWSEV----SEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMV 296
Query: 289 VPY-PLH 294
VP PLH
Sbjct: 297 VPQTPLH 303
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 29/212 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E K+ ++LG G G V+ A +N T VAVK MK E L E ++ L H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAF--LAEANVMKTLQHD 237
Query: 61 NIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSEG------EIRSFMSQMLQGL 113
++KL VV + ++ I E+M + +L ++ EG ++ F +Q+ +G+
Sbjct: 238 KLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKS-----DEGSKQPLPKLIDFSAQIAEGM 291
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
A + + Y HRDL+ N+LV+ V KIADFGLAR + P +W APE +
Sbjct: 292 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFP-------IKW-TAPEA-IN 342
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPI-FPGDS 203
S++ D+W+ G +L E+ T I +PG S
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 374
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 156
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 33/240 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNV-------ETYEIVAVKKMKRKFYFWEECMNLREVKAL 54
+R + + LG+G G V A + VAVK +K + + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 55 RKLN-HPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIP---------------F 97
+ + H NII L ++ L+ I EY + NL ++ R+ P
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 98 SEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYT 156
S ++ S Q+ +G+ ++ HRDL N+LVT D V+KIADFGLAR++ + Y
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 157 EYVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ + R + APE L Y+ D+W+ G +L E+FTL SP +PG +++L+K+
Sbjct: 208 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKL 264
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 170
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 229
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 156
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 33/232 (14%)
Query: 10 LGDGTCGCVYKAFNVETYE-------IVAVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
LG+G G V A V + VAVK +K + + E++ ++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 62 IIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSE---------------GEIRSF 105
II L ++ L+ I Y + NL +R R+ P E ++ S
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW- 163
Q+ +G+ ++ HRDL N+LVT N+V+KIADFGLAR+++++ Y + + R
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ APE L Y+ D+W+ G ++ E+FTL SP +PG +++L+K+
Sbjct: 223 VKWMAPEALF-DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG-IPVEELFKL 271
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 155
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 33/240 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNV-------ETYEIVAVKKMKRKFYFWEECMNLREVKAL 54
+R + + LG+G G V A + VAVK +K + + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 55 RKLN-HPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIP---------------F 97
+ + H NII L ++ L+ I EY + NL ++ R+ P
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 98 SEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYT 156
S ++ S Q+ +G+ ++ HRDL N+LVT D V+KIADFGLAR++ + Y
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 157 EYVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ + R + APE L Y+ D+W+ G +L E+FTL SP +PG +++L+K+
Sbjct: 208 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKL 264
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 156
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 215
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 162
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 163 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 221
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 255
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 155
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 214
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 11/207 (5%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
++ + ELG G G V K + + I+A K + + +RE++ L + N P I+
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 64 KLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMH-RNG 120
+ E+ E+M+ +L +++E ++IP E + +L+GLA++ ++
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIP--EEILGKVSIAVLRGLAYLREKHQ 135
Query: 121 YFHRDLKPENLLV-TNDVLKIADFGLAREL-SSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+KP N+LV + +K+ DFG++ +L SM +V TR Y APE LQ + YS
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMAPE-RLQGTHYSV 192
Query: 179 AIDMWAVGAILAELFTLS-PIFPGDSE 204
D+W++G L EL PI P D++
Sbjct: 193 QSDIWSMGLSLVELAVGRYPIPPPDAK 219
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 175
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 176 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 234
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 268
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 123
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 182
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 170
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 229
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 127
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 186
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 33/240 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNV-------ETYEIVAVKKMKRKFYFWEECMNLREVKAL 54
+R + + LG+G G V A + VAVK +K + + E++ +
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 55 RKLN-HPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIP---------------F 97
+ + H NII L ++ L+ I EY + NL ++ R+ P
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 98 SEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYT 156
S ++ S Q+ +G+ ++ HRDL N+LVT D V+KIADFGLAR++ + Y
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 157 EYVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ + R + APE L Y+ D+W+ G +L E+FTL SP +PG +++L+K+
Sbjct: 193 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKL 249
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 123
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 182
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 33/240 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNV-------ETYEIVAVKKMKRKFYFWEECMNLREVKAL 54
+R + + LG+G G V A + VAVK +K + + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 55 RKLN-HPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIP---------------F 97
+ + H NII L ++ L+ I EY + NL ++ R+ P
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 98 SEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYT 156
S ++ S Q+ +G+ ++ HRDL N+LVT D V+KIADFGLAR++ + Y
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 157 EYVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ + R + APE L Y+ D+W+ G +L E+FTL SP +PG +++L+K+
Sbjct: 208 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKL 264
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 128
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 187
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 128
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 187
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 33/240 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNV-------ETYEIVAVKKMKRKFYFWEECMNLREVKAL 54
+R + + LG+G G V A + VAVK +K + + E++ +
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 55 RKLN-HPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIP---------------F 97
+ + H NII L ++ L+ I EY + NL ++ R+ P
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 98 SEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYT 156
S ++ S Q+ +G+ ++ HRDL N+LVT D V+KIADFGLAR++ + Y
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 157 EYVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ + R + APE L Y+ D+W+ G +L E+FTL SP +PG +++L+K+
Sbjct: 201 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKL 257
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 33/240 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNV-------ETYEIVAVKKMKRKFYFWEECMNLREVKAL 54
+R + + LG+G G V A + VAVK +K + + E++ +
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 55 RKLN-HPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIP---------------F 97
+ + H NII L ++ L+ I EY + NL ++ R+ P
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 98 SEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYT 156
S ++ S Q+ +G+ ++ HRDL N+LVT D V+KIADFGLAR++ + Y
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 157 EYVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ + R + APE L Y+ D+W+ G +L E+FTL SP +PG +++L+K+
Sbjct: 249 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKL 305
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 33/240 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNV-------ETYEIVAVKKMKRKFYFWEECMNLREVKAL 54
+R + + LG+G G V A + VAVK +K + + E++ +
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 55 RKLN-HPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIP---------------F 97
+ + H NII L ++ L+ I EY + NL ++ R+ P
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 98 SEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYT 156
S ++ S Q+ +G+ ++ HRDL N+LVT D V+KIADFGLAR++ + Y
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 157 EYVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ + R + APE L Y+ D+W+ G +L E+FTL SP +PG +++L+K+
Sbjct: 200 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKL 256
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 128
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 187
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 150
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 209
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 243
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 33/240 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNV-------ETYEIVAVKKMKRKFYFWEECMNLREVKAL 54
+R + + LG+G G V A + VAVK +K + + E++ +
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 55 RKLN-HPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIP---------------F 97
+ + H NII L ++ L+ I EY + NL ++ R+ P
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 98 SEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYT 156
S ++ S Q+ +G+ ++ HRDL N+LVT D V+KIADFGLAR++ + Y
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 157 EYVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ + R + APE L Y+ D+W+ G +L E+FTL SP +PG +++L+K+
Sbjct: 197 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKL 253
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF---WEECMNLR----EVKAL 54
++Y + LG G G V+ A + E + V VK +K++ W E L E+ L
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 55 RKLNHPNIIKLKEVVRENNELFFIFEYMEH----NLYHIMRERQIPFSEGEIRSFMSQML 110
++ H NIIK+ ++ N+ FF +H +L+ + +R E Q++
Sbjct: 84 SRVEHANIIKVLDIFE--NQGFFQLVMEKHGSGLDLFAFI-DRHPRLDEPLASYIFRQLV 140
Query: 111 QGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEV 169
+ ++ HRD+K EN+++ D +K+ DFG A L + + T Y APEV
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEV 200
Query: 170 LLQSSSYSPAIDMWAVGAILAEL 192
L+ + P ++MW++G L L
Sbjct: 201 LMGNPYRGPELEMWSLGVTLYTL 223
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 8 EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKE 67
E++G G G V+ +VAVK + + L+E + L++ +HPNI++L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 68 VVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDL 126
V + ++ + E ++ + +R + + G+ ++ HRDL
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 127 KPENLLVT-NDVLKIADFGLARE----LSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAID 181
N LVT +VLKI+DFG++RE + + V +W APE L YS D
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT-APEA-LNYGRYSSESD 297
Query: 182 MWAVGAILAELFTLS 196
+W+ G +L E F+L
Sbjct: 298 VWSFGILLWETFSLG 312
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKM-KRKFYFWEECMNLR----EVKALRKL 57
+Y++ LG G G VY V VA+K + K + W E N EV L+K+
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYME--HNLYHIMRERQIPFSEGEIRSFMSQMLQGL 113
+ +I+L + + I E E +L+ + ER E RSF Q+L+ +
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAV 126
Query: 114 AHMHRNGYFHRDLKPENLLV--TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H H G HRD+K EN+L+ LK+ DFG L YT++ TR Y PE +
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 185
Query: 172 QSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEI 205
+ + +W++G +L ++ F D EI
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 219
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
++++E +G+GT G VYK +V+T ++ A+K M EE +E+ L+K +H I
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK--QEINMLKKYSHHRNI 83
Query: 64 KL--KEVVREN-----NELFFIFEYMEHNLYH--IMRERQIPFSEGEIRSFMSQMLQGLA 114
+++N ++L+ + E+ I + E I ++L+GL+
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143
Query: 115 HMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELS-SMPPYTEYVSTRWYRAPEVLL- 171
H+H++ HRD+K +N+L+T N +K+ DFG++ +L ++ ++ T ++ APEV+
Sbjct: 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC 203
Query: 172 ---QSSSYSPAIDMWAVGAILAELFTLSP 197
++Y D+W++G E+ +P
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 46/228 (20%)
Query: 1 MERYKIL--EELGDGTCGCVYKAFNVETYEI--------VAVKKMK------RKFYFWEE 44
++R+ I+ ELG+G G K F E Y + VAVK +K RK +
Sbjct: 10 IKRHNIVLKRELGEGAFG---KVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFH--- 63
Query: 45 CMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYH-----------IMRER 93
RE + L L H +I+K V E + L +FEYM+H + +M E
Sbjct: 64 ----REAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEG 119
Query: 94 QIP--FSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTNDVL-KIADFGLARELS 150
P ++ ++ Q+ G+ ++ + HRDL N LV ++L KI DFG++R++
Sbjct: 120 NPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY 179
Query: 151 SMPPYTEYVST----RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
S Y T RW PE ++ ++ D+W++G +L E+FT
Sbjct: 180 STDYYRVGGHTMLPIRWM-PPESIM-YRKFTTESDVWSLGVVLWEIFT 225
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 9 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 65
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 66 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRW---YRAPEVLLQSSS 175
Y HR+L+ N+LV++ + KIADFGLAR L YT ++ + APE + +
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEA-INYGT 182
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPYPG 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
M+ K+L+ +G G G V VAVK +K L E + +L H
Sbjct: 5 MKELKLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHS 59
Query: 61 NIIKLKEV-VRENNELFFIFEYM-EHNLYHIMRERQIPFSEGE-IRSFMSQMLQGLAHMH 117
N+++L V V E L+ + EYM + +L +R R G+ + F + + + ++
Sbjct: 60 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
Query: 118 RNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
N + HRDL N+LV+ D V K++DFGL +E SS T + +W APE L+ +
Sbjct: 120 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEA-LREKKF 176
Query: 177 SPAIDMWAVGAILAELFTLSPI 198
S D+W+ G +L E+++ +
Sbjct: 177 STKSDVWSFGILLWEIYSFGRV 198
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 9 ELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
ELG+G G V+ A + +VAVK +K + RE + L L H +I+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIV 106
Query: 64 KLKEVVRENNELFFIFEYMEH-NLYHIMRERQ--------------IPFSEGEIRSFMSQ 108
+ V E L +FEYM H +L +R P G++ + SQ
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 109 MLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST----RW 163
+ G+ ++ + HRDL N LV V+KI DFG++R++ S Y T RW
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 226
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
PE +L ++ D+W+ G +L E+FT
Sbjct: 227 M-PPESIL-YRKFTTESDVWSFGVVLWEIFT 255
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 12/202 (5%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
M+ K+L+ +G G G V VAVK +K L E + +L H
Sbjct: 20 MKELKLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHS 74
Query: 61 NIIKLKEV-VRENNELFFIFEYM-EHNLYHIMRERQIPFSEGE-IRSFMSQMLQGLAHMH 117
N+++L V V E L+ + EYM + +L +R R G+ + F + + + ++
Sbjct: 75 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 118 RNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
N + HRDL N+LV+ D V K++DFGL +E SS T + +W APE L+ +
Sbjct: 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEA-LREKKF 191
Query: 177 SPAIDMWAVGAILAELFTLSPI 198
S D+W+ G +L E+++ +
Sbjct: 192 STKSDVWSFGILLWEIYSFGRV 213
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 42/219 (19%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK----- 64
LG G G V++A N A+K+++ +REVKAL KL HP I++
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 65 ----LKEVVRENNELFFIFEYME----HNLYHIM--------RERQIPFSEGEIRSFMSQ 108
E ++ ++ +++ M+ NL M RER + Q
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH------IFLQ 126
Query: 109 MLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARE----------LSSMPPYTE 157
+ + + +H G HRDLKP N+ T +DV+K+ DFGL L+ MP Y
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 158 Y---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELF 193
+ V T+ Y +PE + +SYS +D++++G IL EL
Sbjct: 187 HTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ +L ELG G+ G VY+ E VAVK + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRE---------RQIPFSEGEIRSFM 106
++++L VV + + E M H +L +R + P + E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
+++ G+A+++ + HRDL N +V +D +KI DFG+ R++ Y + +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW APE L+ ++ + DMW+ G +L E+ +L+
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 9 ELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
ELG+G G V+ A + +VAVK +K + RE + L L H +I+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIV 77
Query: 64 KLKEVVRENNELFFIFEYMEH-NLYHIMRERQ--------------IPFSEGEIRSFMSQ 108
+ V E L +FEYM H +L +R P G++ + SQ
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 109 MLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST----RW 163
+ G+ ++ + HRDL N LV V+KI DFG++R++ S Y T RW
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 197
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
PE +L ++ D+W+ G +L E+FT
Sbjct: 198 M-PPESIL-YRKFTTESDVWSFGVVLWEIFT 226
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 1 MERYKILEELGDGTCGCV----YKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
M+ K+L+ +G G G V Y+ V AVK +K L E + +
Sbjct: 192 MKELKLLQTIGKGEFGDVMLGDYRGNKV------AVKCIKNDA---TAQAFLAEASVMTQ 242
Query: 57 LNHPNIIKLKEV-VRENNELFFIFEYM-EHNLYHIMRERQIPFSEGE-IRSFMSQMLQGL 113
L H N+++L V V E L+ + EYM + +L +R R G+ + F + + +
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQ 172
++ N + HRDL N+LV+ D V K++DFGL +E SS T + +W APE L+
Sbjct: 303 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEA-LR 359
Query: 173 SSSYSPAIDMWAVGAILAELFTLSPI 198
+S D+W+ G +L E+++ +
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGRV 385
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 9 ELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
ELG+G G V+ A + +VAVK +K + RE + L L H +I+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ-REAELLTMLQHQHIV 83
Query: 64 KLKEVVRENNELFFIFEYMEH-NLYHIMRERQ--------------IPFSEGEIRSFMSQ 108
+ V E L +FEYM H +L +R P G++ + SQ
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 109 MLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST----RW 163
+ G+ ++ + HRDL N LV V+KI DFG++R++ S Y T RW
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 203
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
PE +L ++ D+W+ G +L E+FT
Sbjct: 204 M-PPESIL-YRKFTTESDVWSFGVVLWEIFT 232
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLN-HPNIIKLKEV 68
LG G G + + ++ + + F F + REV+ LR+ + HPN+I+
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD-----REVQLLRESDEHPNVIRYFCT 86
Query: 69 VRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKP 128
++ + E L + ++ E + + Q GLAH+H HRDLKP
Sbjct: 87 EKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKP 146
Query: 129 ENLLVT----NDVLK--IADFGLARELS----SMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
N+L++ + +K I+DFGL ++L+ S + T + APE+L + +P
Sbjct: 147 HNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENP 206
Query: 179 A--IDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+D+++ G + Y V P + NI L + S
Sbjct: 207 TYTVDIFSAGCVF-------------------YYVISEGSHPFGKSLQRQANIL-LGACS 246
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ P D+I A +LI ++ + DP +RP+A L+HPFF
Sbjct: 247 LDCLHPEKHEDVI------ARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
++ + ELG G G V+K + + ++A K + + +RE++ L + N P I+
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 64 KLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH-RNGYF 122
+ E+ E+M+ + ++ E + +++GL ++ ++
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 189
Query: 123 HRDLKPENLLV-TNDVLKIADFGLAREL-SSMPPYTEYVSTRWYRAPEVLLQSSSYSPAI 180
HRD+KP N+LV + +K+ DFG++ +L SM +V TR Y +PE LQ + YS
Sbjct: 190 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPE-RLQGTHYSVQS 246
Query: 181 DMWAVGAILAELFTLS-PIFPGDSEIDQLYKVCCILG 216
D+W++G L E+ PI P D++ +L C + G
Sbjct: 247 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 283
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 18/198 (9%)
Query: 5 KILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
++ E +G G G V KA + VA+K+++ + E + E++ L ++NHPNI+K
Sbjct: 12 EVEEVVGRGAFGVVCKA--KWRAKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVK 66
Query: 65 LKEVVRENNELFFIFEYME-HNLYHIMRERQ-IP-FSEGEIRSFMSQMLQGLAHMHR--- 118
L N + + EY E +LY+++ + +P ++ S+ Q QG+A++H
Sbjct: 67 LYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 119 NGYFHRDLKPENLLVT--NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRDLKP NLL+ VLKI DFG A ++ + T + + APEV + S+Y
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEV-FEGSNY 181
Query: 177 SPAIDMWAVGAILAELFT 194
S D+++ G IL E+ T
Sbjct: 182 SEKCDVFSWGIILWEVIT 199
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 18/198 (9%)
Query: 5 KILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
++ E +G G G V KA + VA+K+++ + E + E++ L ++NHPNI+K
Sbjct: 11 EVEEVVGRGAFGVVCKA--KWRAKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVK 65
Query: 65 LKEVVRENNELFFIFEYME-HNLYHIMRERQ-IP-FSEGEIRSFMSQMLQGLAHMHR--- 118
L N + + EY E +LY+++ + +P ++ S+ Q QG+A++H
Sbjct: 66 LYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 119 NGYFHRDLKPENLLVT--NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
HRDLKP NLL+ VLKI DFG A ++ + T + + APEV + S+Y
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEV-FEGSNY 180
Query: 177 SPAIDMWAVGAILAELFT 194
S D+++ G IL E+ T
Sbjct: 181 SEKCDVFSWGIILWEVIT 198
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ +L ELG G+ G VY+ E VAVK + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRE---------RQIPFSEGEIRSFM 106
++++L VV + + E M H +L +R + P + E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
+++ G+A+++ + HRDL N +V +D +KI DFG+ R++ Y + +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW APE L+ ++ + DMW+ G +L E+ +L+
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 8 EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKE 67
E++G G G V+ +VAVK + + L+E + L++ +HPNI++L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 68 VVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDL 126
V + ++ + E ++ + +R + + G+ ++ HRDL
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 127 KPENLLVT-NDVLKIADFGLARE----LSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAID 181
N LVT +VLKI+DFG++RE + + V +W APE L YS D
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT-APEA-LNYGRYSSESD 297
Query: 182 MWAVGAILAELFTLS 196
+W+ G +L E F+L
Sbjct: 298 VWSFGILLWETFSLG 312
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 2 ERYKILEELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ +L ELG G+ G VY+ E VAVK + E L E ++
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 75
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEG----------EIRSF 105
++++L VV + + E M H +L +R + P +E E+
Sbjct: 76 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLR-PEAENNPGRPPPTLQEMIQM 134
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVS 160
+++ G+A+++ + HRDL N +V +D +KI DFG+ R++ Y + +
Sbjct: 135 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 161 TRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW APE L+ ++ + DMW+ G +L E+ +L+
Sbjct: 195 VRWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 228
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 106/202 (52%), Gaps = 20/202 (9%)
Query: 1 MERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVK-------A 53
++ ++IL LG G+ G V+ + A+K +K+ E + L++V+
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK-----EIVVRLKQVEHTNDERLM 59
Query: 54 LRKLNHPNIIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQG 112
L + HP II++ ++ ++F I +Y+E L+ ++R+ Q F + + +++
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLA 118
Query: 113 LAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYV-STRWYRAPEVL 170
L ++H +RDLKPEN+L+ N +KI DFG A+ +P T + T Y APEV
Sbjct: 119 LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK---YVPDVTYXLCGTPDYIAPEV- 174
Query: 171 LQSSSYSPAIDMWAVGAILAEL 192
+ + Y+ +ID W+ G ++ E+
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEM 196
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 21 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 77
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 78 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVST---RWYRAPEVLLQSSS 175
Y HRDL+ N+LV++ + KIADFGLAR + + +W APE + +
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYGT 194
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPG 221
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 69
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 70 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVST---RWYRAPEVLLQSSS 175
Y HRDL+ N+LV++ + KIADFGLAR + + +W APE + +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYGT 186
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 15 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 71
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 72 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVST---RWYRAPEVLLQSSS 175
Y HRDL+ N+LV++ + KIADFGLAR + + +W APE + +
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYGT 188
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPG 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 25/215 (11%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E K+ ++LG G G V+ A +N T VAVK MK E L E ++ L H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAF--LAEANVMKTLQHD 70
Query: 61 NIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSEG------EIRSFMSQMLQGL 113
++KL VV + ++ I E+M + +L ++ EG ++ F +Q+ +G+
Sbjct: 71 KLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKS-----DEGSKQPLPKLIDFSAQIAEGM 124
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW---YRAPEV 169
A + + Y HRDL+ N+LV+ V KIADFGLAR + YT ++ + APE
Sbjct: 125 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEA 183
Query: 170 LLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGDS 203
+ S++ D+W+ G +L E+ T I +PG S
Sbjct: 184 -INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 217
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 14 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 70
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 71 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVST---RWYRAPEVLLQSSS 175
Y HRDL+ N+LV++ + KIADFGLAR + + +W APE + +
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYGT 187
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPG 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 75
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 76 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVST---RWYRAPEVLLQSSS 175
Y HRDL+ N+LV++ + KIADFGLAR + + +W APE + +
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYGT 192
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 5 KILEELGDGTCGCVYKA---FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
KI E +G G G V + + VA+K +K + + L E + + HPN
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 62 IIKLKEVVRENNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG 120
II+L+ VV + + + E+ME+ L +R F+ ++ + + G+ ++
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMS 138
Query: 121 YFHRDLKPENLLV-TNDVLKIADFGLAR---ELSSMPPYTEYVST----RWYRAPEVLLQ 172
Y HRDL N+LV +N V K++DFGL+R E SS P T + RW APE +
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT-APEA-IA 196
Query: 173 SSSYSPAIDMWAVGAILAELFTLS 196
++ A D W+ G ++ E+ +
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFG 220
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++++ LG+G G V+ +N T VA+K +K E L E + ++KL H
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTK--VAIKTLKPGTMSPESF--LEEAQIMKKLKHD 64
Query: 61 NIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSEGEIRSF--------MSQMLQ 111
+++L VV E ++ + EYM + +L +++ GE R+ +Q+
Sbjct: 65 KLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKD-------GEGRALKLPNLVDMAAQVAA 116
Query: 112 GLAHMHRNGYFHRDLKPENLLVTNDVL-KIADFGLARELSSMPPYTEYVST---RWYRAP 167
G+A++ R Y HRDL+ N+LV N ++ KIADFGLAR + + +W AP
Sbjct: 117 GMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW-TAP 175
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGDS------EIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG + ++++ Y++ C
Sbjct: 176 EAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPC 227
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 7/219 (3%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
+ ++ + ELG G G V+K + + ++A K + + +RE++ L + N P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH-RNG 120
I+ + E+ E+M+ + ++ E + +++GL ++ ++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 121 YFHRDLKPENLLV-TNDVLKIADFGLAREL-SSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+KP N+LV + +K+ DFG++ +L SM +V TR Y +PE LQ + YS
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYSV 182
Query: 179 AIDMWAVGAILAELFTLS-PIFPGDSEIDQLYKVCCILG 216
D+W++G L E+ PI P D++ +L C + G
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 22 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 78
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 79 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVST---RWYRAPEVLLQSSS 175
Y HRDL+ N+LV++ + KIADFGLAR + + +W APE + +
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYGT 195
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPYPG 222
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 7/219 (3%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
+ ++ + ELG G G V+K + + ++A K + + +RE++ L + N P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH-RNG 120
I+ + E+ E+M+ + ++ E + +++GL ++ ++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 121 YFHRDLKPENLLV-TNDVLKIADFGLAREL-SSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+KP N+LV + +K+ DFG++ +L SM +V TR Y +PE LQ + YS
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYSV 182
Query: 179 AIDMWAVGAILAELFTLS-PIFPGDSEIDQLYKVCCILG 216
D+W++G L E+ PI P D++ +L C + G
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 25/215 (11%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E K+ ++LG G G V+ A +N T VAVK MK E L E ++ L H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAF--LAEANVMKTLQHD 243
Query: 61 NIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIPFSEG------EIRSFMSQMLQGL 113
++KL VV + ++ I E+M + +L ++ EG ++ F +Q+ +G+
Sbjct: 244 KLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKS-----DEGSKQPLPKLIDFSAQIAEGM 297
Query: 114 AHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW---YRAPEV 169
A + + Y HRDL+ N+LV+ V KIADFGLAR + YT ++ + APE
Sbjct: 298 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEA 356
Query: 170 LLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGDS 203
+ S++ D+W+ G +L E+ T I +PG S
Sbjct: 357 -INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 390
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
E K++E LG G G V+ + + VAVK +K+ + L E +++L H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAF--LAEANLMKQLQHQR 69
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRE-RQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+++L VV + ++ I EYME+ +L ++ I + ++ +Q+ +G+A +
Sbjct: 70 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 120 GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVST---RWYRAPEVLLQSSS 175
Y HRDL+ N+LV++ + KIADFGLAR + + +W APE + +
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPEA-INYGT 186
Query: 176 YSPAIDMWAVGAILAELFTLSPI-FPG 201
++ D+W+ G +L E+ T I +PG
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 73
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE+ ++ +Q+
Sbjct: 74 KLVQLYAVVSEE-PIYIVMEYMSKGCL-------LDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 184
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG 201
E L ++ D+W+ G +L EL T + +PG
Sbjct: 185 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 33/240 (13%)
Query: 2 ERYKILEELGDGTCGCVYKAFNV-------ETYEIVAVKKMKRKFYFWEECMNLREVKAL 54
+R + + LG+G G V A + VAVK +K + + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 55 RKLN-HPNIIKLKEVVRENNELFFIFEYM-EHNLYHIMRERQIP---------------F 97
+ + H NII L ++ L+ I EY + NL ++ R+ P
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 98 SEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYT 156
S ++ S Q+ +G+ ++ HRDL N+LVT D V+KIADFGLAR++ +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 157 EYVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPGDSEIDQLYKV 211
+ + R + APE L Y+ D+W+ G +L E+FTL SP +PG +++L+K+
Sbjct: 208 KTTNGRLPVKWMAPEALF-DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG-VPVEELFKL 264
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 4 YKILEELGDGTCGCVYKA---FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
+K +E +G G G V+KA + +TY I VK Y E+ REVKAL KL+H
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK------YNNEKAE--REVKALAKLDHV 64
Query: 61 NIIKL---------------KEVVRENNELFFI-FEYMEHNLYH--IMRERQIPFSEGEI 102
NI+ K R + FI E+ + I + R +
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 103 RSFMSQMLQGLAHMHRNGYFHRDLKPENL-LVTNDVLKIADFGLARELSSMPPYTEYVST 161
Q+ +G+ ++H +RDLKP N+ LV +KI DFGL L + T
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGT 184
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELF 193
Y +PE + S Y +D++A+G ILAEL
Sbjct: 185 LRYMSPE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 7/209 (3%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN 61
+ ++ + ELG G G V+K + + ++A K + + +RE++ L + N P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 62 IIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH-RNG 120
I+ + E+ E+M+ + ++ E + +++GL ++ ++
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 121 YFHRDLKPENLLV-TNDVLKIADFGLAREL-SSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+KP N+LV + +K+ DFG++ +L SM +V TR Y +PE LQ + YS
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYSV 182
Query: 179 AIDMWAVGAILAELFTLS-PIFPGDSEID 206
D+W++G L E+ PI P D++ D
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKED 211
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 4 YKILEELGDGTCGCVYKA---FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
+K +E +G G G V+KA + +TY I VK Y E+ REVKAL KL+H
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVK------YNNEKAE--REVKALAKLDHV 65
Query: 61 NIIKL----------------------------KEVVRENNELFFI-FEYMEHNLYH--I 89
NI+ K R + FI E+ + I
Sbjct: 66 NIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI 125
Query: 90 MRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENL-LVTNDVLKIADFGLARE 148
+ R + Q+ +G+ ++H HRDLKP N+ LV +KI DFGL
Sbjct: 126 EKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 149 LSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELF 193
L + T T Y +PE + S Y +D++A+G ILAEL
Sbjct: 186 LKNDGKRTRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
++ + ELG G G V+K + + ++A K + + +RE++ L + N P I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 64 KLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH-RNGYF 122
+ E+ E+M+ + ++ E + +++GL ++ ++
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 127
Query: 123 HRDLKPENLLV-TNDVLKIADFGLAREL-SSMPPYTEYVSTRWYRAPEVLLQSSSYSPAI 180
HRD+KP N+LV + +K+ DFG++ +L SM +V TR Y +PE LQ + YS
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYSVQS 184
Query: 181 DMWAVGAILAELFTLS-PIFPGDSEIDQLYKVCCILG 216
D+W++G L E+ PI P D++ +L C + G
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
++ + ELG G G V+K + + ++A K + + +RE++ L + N P I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 64 KLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH-RNGYF 122
+ E+ E+M+ + ++ E + +++GL ++ ++
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 127
Query: 123 HRDLKPENLLV-TNDVLKIADFGLAREL-SSMPPYTEYVSTRWYRAPEVLLQSSSYSPAI 180
HRD+KP N+LV + +K+ DFG++ +L SM +V TR Y +PE LQ + YS
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYSVQS 184
Query: 181 DMWAVGAILAELFTLS-PIFPGDSEIDQLYKVCCILG 216
D+W++G L E+ PI P D++ +L C + G
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 73
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE+ ++ +Q+
Sbjct: 74 KLVQLYAVVSEE-PIYIVIEYMSKG-------SLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 184
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 185 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 2 ERYKILEELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ +L ELG G+ G VY+ E VAVK + E L E ++
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 73
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEG----------EIRSF 105
++++L VV + + E M H +L +R + P +E E+
Sbjct: 74 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLR-PEAENNPGRPPPTLQEMIQM 132
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVS 160
+++ G+A+++ + HRDL N +V +D +KI DFG+ R++ + +
Sbjct: 133 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 161 TRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW APE L+ ++ + DMW+ G +L E+ +L+
Sbjct: 193 VRWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ +L ELG G+ G VY+ E VAVK + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRE---------RQIPFSEGEIRSFM 106
++++L VV + + E M H +L +R + P + E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
+++ G+A+++ + HRDL N +V +D +KI DFG+ R++ + +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW APE L+ ++ + DMW+ G +L E+ +L+
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ +L ELG G+ G VY+ E VAVK + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRE---------RQIPFSEGEIRSFM 106
++++L VV + + E M H +L +R + P + E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
+++ G+A+++ + HRDL N +V +D +KI DFG+ R++ + +
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW APE L+ ++ + DMW+ G +L E+ +L+
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 10 LGDGTCGCVYKA--FNVET---YEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
LG+G G V KA F+++ Y VAVK +K E L E L+++NHP++IK
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 65 LKEVVRENNELFFIFEYMEH-NLYHIMRE-RQI----------------------PFSEG 100
L ++ L I EY ++ +L +RE R++ + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 101 EIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYV 159
++ SF Q+ QG+ ++ HRDL N+LV +KI+DFGL+R++ Y +
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
Query: 160 STRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG 201
R + A E L Y+ D+W+ G +L E+ TL +PG
Sbjct: 211 QGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 34/253 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R K+ + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFSEGE---IRSFMS 107
+ H N++ L + L I E+ + NL +R ++ +P+ E + F++
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 108 ---------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P Y
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLY 209
R + APE + Y+ D+W+ G +L E+F+L SP +PG D E +
Sbjct: 209 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFCRRL 266
Query: 210 KVCCILGAPDWTA 222
K + APD+T
Sbjct: 267 KEGTRMRAPDYTT 279
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
++ + ELG G G V+K + + ++A K + + +RE++ L + N P I+
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 64 KLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH-RNGYF 122
+ E+ E+M+ + ++ E + +++GL ++ ++
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 154
Query: 123 HRDLKPENLLV-TNDVLKIADFGLAREL-SSMPPYTEYVSTRWYRAPEVLLQSSSYSPAI 180
HRD+KP N+LV + +K+ DFG++ +L SM +V TR Y +PE LQ + YS
Sbjct: 155 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYSVQS 211
Query: 181 DMWAVGAILAELFTLS-PIFPGDSEIDQLYKVCCILG 216
D+W++G L E+ PI P D++ +L C + G
Sbjct: 212 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 248
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ ++ +
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 173
Query: 123 HRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST------RWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ Y+ + T +W LQ+
Sbjct: 174 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 231
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 232 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 263
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 30 VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEH-NLYH 88
VA+K +K + + L E + + +HPNII L+ VV + + I EYME+ +L
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 89 IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAR 147
+R+ F+ ++ + + G+ ++ HRDL N+LV +N V K++DFG++R
Sbjct: 120 FLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 148 ELSSMP--PYTEY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
L P YT + RW APE + ++ A D+W+ G ++ E+ +
Sbjct: 180 VLEDDPEAAYTTRGGKIPIRWT-APEAIAY-RKFTSASDVWSYGIVMWEVMS 229
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 73
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE+ ++ +Q+
Sbjct: 74 KLVQLYAVVSEE-PIYIVTEYMSKGCL-------LDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 184
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG 201
E L ++ D+W+ G +L EL T + +PG
Sbjct: 185 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 29/213 (13%)
Query: 8 EELGDGTCGCVYKA--FNVETYE---IVAVKKMKRKFYFWEECMNLREVKALRKLNHPNI 62
ELG+G G V+ A +N+ + +VAVK +K + RE + L L H +I
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQ-REAELLTNLQHEHI 79
Query: 63 IKLKEVVRENNELFFIFEYMEHNLYH-----------IMRERQIPFSEGEIR-----SFM 106
+K V + + L +FEYM+H + I+ + Q ++GE+
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVST---- 161
SQ+ G+ ++ + HRDL N LV N ++KI DFG++R++ S Y T
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
RW PE ++ ++ D+W+ G IL E+FT
Sbjct: 200 RWM-PPESIM-YRKFTTESDVWSFGVILWEIFT 230
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ ++ +
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 174
Query: 123 HRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST------RWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ Y+ + T +W LQ+
Sbjct: 175 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 232
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 233 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 264
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 36/286 (12%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVK-ALRKLNHPNIIKLKE 67
ELG G G V K +V + +I+AVK+++ E+ L ++ ++R ++ P +
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 68 VVRENNELFFIFEYMEHNL---YHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN-GYFH 123
+ +++ E M+ +L Y + ++ E + +++ L H+H H
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 177
Query: 124 RDLKPENLLVTN-DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL---LQSSSYSPA 179
RD+KP N+L+ +K+ DFG++ L T + Y APE + L YS
Sbjct: 178 RDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVK 237
Query: 180 IDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISYSE 239
D+W++G + EL L FP DS ++ ++ P S
Sbjct: 238 SDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVEEP-------------------SP 276
Query: 240 ILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
LP + S E +D Q + RPT + +QHPFF +
Sbjct: 277 QLPAD------KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 316
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ ++ +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 123 HRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST------RWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ Y+ + T +W LQ+
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 213
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 73
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE+ ++ +Q+
Sbjct: 74 KLVQLYAVVSEE-PIYIVTEYMSKG-------SLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 184
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 185 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ +L ELG G+ G VY+ E VAVK + E L E ++
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 77
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRE---------RQIPFSEGEIRSFM 106
++++L VV + + E M H +L +R + P + E+
Sbjct: 78 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 137
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
+++ G+A+++ + HR+L N +V +D +KI DFG+ R++ Y + +
Sbjct: 138 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW APE L+ ++ + DMW+ G +L E+ +L+
Sbjct: 198 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ ++ +
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 152
Query: 123 HRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST------RWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ Y+ + T +W LQ+
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 210
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 211 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 242
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVY-KAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 322
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE ++ +Q+
Sbjct: 323 KLVQLYAVVSEE-PIYIVTEYMSKGSL-------LDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 375 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 433
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 434 EAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 485
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ ++ +
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 147
Query: 123 HRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST------RWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ Y+ + T +W LQ+
Sbjct: 148 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 205
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 206 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 237
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKA-----FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ +L ELG G+ G VY+ E VAVK + E L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRE---------RQIPFSEGEIRSFM 106
++++L VV + + E M H +L +R + P + E+
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
+++ G+A+++ + HR+L N +V +D +KI DFG+ R++ Y + +
Sbjct: 137 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW APE L+ ++ + DMW+ G +L E+ +L+
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLA 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ ++ +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 123 HRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST------RWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ Y+ + T +W LQ+
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 213
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ ++ +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 123 HRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST------RWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ Y+ + T +W LQ+
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 212
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYF-WEECMNLREVKALRKLN-H 59
+ ++ L LG G+ G V+K + E + AVK+ F + L EV + K+ H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
P ++L++ E L+ E +L E ++ ++ L LAH+H
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 120 GYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
G H D+KP N+ + K+ DFGL EL + Y APE+L SY
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL--QGSYGT 234
Query: 179 AIDMWAVGAILAEL 192
A D++++G + E+
Sbjct: 235 AADVFSLGLTILEV 248
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 29/215 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 73
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE+ ++ +Q+
Sbjct: 74 KLVQLYAVVSEE-PIYIVCEYMSKG-------SLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 184
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG 201
E L ++ D+W+ G +L EL T + +PG
Sbjct: 185 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ ++ +
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150
Query: 123 HRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST------RWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ Y+ + T +W LQ+
Sbjct: 151 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 208
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 209 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 240
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ ++ +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 153
Query: 123 HRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST------RWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ Y+ + T +W LQ+
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--LQTQK 211
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 64
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE+ ++ +Q+
Sbjct: 65 KLVQLYAVVSEE-PIYIVTEYMSKG-------SLLDFLKGEMGKYLRLPQLVDMAAQIAS 116
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 117 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 175
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 176 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 227
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 36/221 (16%)
Query: 10 LGDGTCGCVYKA--FNVET---YEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
LG+G G V KA F+++ Y VAVK +K E L E L+++NHP++IK
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 65 LKEVVRENNELFFIFEYMEH-NLYHIMRE-RQI----------------------PFSEG 100
L ++ L I EY ++ +L +RE R++ + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 101 EIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLAREL----SSMPPY 155
++ SF Q+ QG+ ++ HRDL N+LV +KI+DFGL+R++ S +
Sbjct: 151 DLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 156 TEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
+ +W A E L Y+ D+W+ G +L E+ TL
Sbjct: 211 QGRIPVKWM-AIESLF-DHIYTTQSDVWSFGVLLWEIVTLG 249
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 62
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE+ ++ +Q+
Sbjct: 63 KLVQLYAVVSEE-PIYIVTEYMSKG-------SLLDFLKGEMGKYLRLPQLVDMAAQIAS 114
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 115 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 173
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 174 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 225
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 34/253 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R K+ + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFS---EGEIRSFMS 107
+ H N++ L + L I E+ + NL +R ++ +P+ E + F++
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 108 ---------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P Y
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLY 209
R + APE + Y+ D+W+ G +L E+F+L SP +PG D E +
Sbjct: 244 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFCRRL 301
Query: 210 KVCCILGAPDWTA 222
K + APD+T
Sbjct: 302 KEGTRMRAPDYTT 314
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR---EVKALRKLNHPNIIKL 65
++G+G G VYK + T VAVKK+ E + + E+K + K H N+++L
Sbjct: 38 KMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 66 KEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQ-MLQGLAHMHRNGYF 122
+ ++L ++ YM + L + P +R ++Q G+ +H N +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 123 HRDLKPENLLVTND-VLKIADFGLAR---ELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+K N+L+ KI+DFGLAR + + + V T Y APE L +P
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL--RGEITP 213
Query: 179 AIDMWAVGAILAELFTLSP 197
D+++ G +L E+ T P
Sbjct: 214 KSDIYSFGVVLLEIITGLP 232
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 34/253 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R K+ + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFS---EGEIRSFMS 107
+ H N++ L + L I E+ + NL +R ++ +P+ E + F++
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 108 ---------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P Y
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLY 209
R + APE + Y+ D+W+ G +L E+F+L SP +PG D E +
Sbjct: 207 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFCRRL 264
Query: 210 KVCCILGAPDWTA 222
K + APD+T
Sbjct: 265 KEGTRMRAPDYTT 277
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 123/305 (40%), Gaps = 56/305 (18%)
Query: 3 RYKILEELGDGTCGCV-----YKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL 57
R + LG G G V Y + VAVK +K + E + E+K L L
Sbjct: 40 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 99
Query: 58 -NHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPF-----------------S 98
NH NI+ L I EY + +L + +R ++ F
Sbjct: 100 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 159
Query: 99 EGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE 157
++ SF Q+ +G+A + HRDL N+L+T+ + KI DFGLAR++ + Y
Sbjct: 160 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 219
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
+ R + APE + + Y+ D+W+ G L ELF+L
Sbjct: 220 KGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSL------------------- 259
Query: 215 LGAPDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTA 274
G+ + P + ++I + + P +A E D++ DPL+RPT
Sbjct: 260 -GSSPYPGMPVDSKFYKMIKEGFRMLSP-------EHAPAEMYDIMKTCWDADPLKRPTF 311
Query: 275 DQALQ 279
Q +Q
Sbjct: 312 KQIVQ 316
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 24/168 (14%)
Query: 48 LREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM- 106
L+E + ++KL H +++L VV E ++ + EYM + F +GE ++
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKG-------SLLDFLKGETGKYLR 278
Query: 107 --------SQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
+Q+ G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT
Sbjct: 279 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTA 337
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG 201
++ + APE L ++ D+W+ G +L EL T + +PG
Sbjct: 338 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 24/168 (14%)
Query: 48 LREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM- 106
L+E + ++KL H +++L VV E ++ + EYM + F +GE ++
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKG-------SLLDFLKGETGKYLR 278
Query: 107 --------SQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
+Q+ G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT
Sbjct: 279 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTA 337
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG 201
++ + APE L ++ D+W+ G +L EL T + +PG
Sbjct: 338 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 123/305 (40%), Gaps = 56/305 (18%)
Query: 3 RYKILEELGDGTCGCV-----YKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL 57
R + LG G G V Y + VAVK +K + E + E+K L L
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83
Query: 58 -NHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPF-----------------S 98
NH NI+ L I EY + +L + +R ++ F
Sbjct: 84 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143
Query: 99 EGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE 157
++ SF Q+ +G+A + HRDL N+L+T+ + KI DFGLAR++ + Y
Sbjct: 144 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
+ R + APE + + Y+ D+W+ G L ELF+L
Sbjct: 204 KGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSL------------------- 243
Query: 215 LGAPDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTA 274
G+ + P + ++I + + P +A E D++ DPL+RPT
Sbjct: 244 -GSSPYPGMPVDSKFYKMIKEGFRMLSP-------EHAPAEMYDIMKTCWDADPLKRPTF 295
Query: 275 DQALQ 279
Q +Q
Sbjct: 296 KQIVQ 300
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 70
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE ++ +Q+
Sbjct: 71 KLVQLYAVVSEE-PIYIVTEYMNKGSL-------LDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 181
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 182 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 233
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 24/168 (14%)
Query: 48 LREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM- 106
L+E + ++KL H +++L VV E ++ + EYM + F +GE ++
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMSKG-------SLLDFLKGETGKYLR 278
Query: 107 --------SQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
+Q+ G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT
Sbjct: 279 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTA 337
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG 201
++ + APE L ++ D+W+ G +L EL T + +PG
Sbjct: 338 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 32/250 (12%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R + + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFSEGEIRSFMS--- 107
+ H N++ L + L I E+ + NL +R ++ +P+ + + F++
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKD-LYKDFLTLEH 145
Query: 108 ------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVS 160
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P Y
Sbjct: 146 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 161 TRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLYKVC 212
R + APE + Y+ D+W+ G +L E+F+L SP +PG D E + K
Sbjct: 206 ARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFXRRLKEG 263
Query: 213 CILGAPDWTA 222
+ APD+T
Sbjct: 264 TRMRAPDYTT 273
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 36/221 (16%)
Query: 10 LGDGTCGCVYKA--FNVET---YEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
LG+G G V KA F+++ Y VAVK +K E L E L+++NHP++IK
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 65 LKEVVRENNELFFIFEYMEH-NLYHIMRE-RQI----------------------PFSEG 100
L ++ L I EY ++ +L +RE R++ + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 101 EIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLAREL----SSMPPY 155
++ SF Q+ QG+ ++ HRDL N+LV +KI+DFGL+R++ S +
Sbjct: 151 DLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 156 TEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
+ +W A E L Y+ D+W+ G +L E+ TL
Sbjct: 211 QGRIPVKWM-AIESLF-DHIYTTQSDVWSFGVLLWEIVTLG 249
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 66
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE ++ +Q+
Sbjct: 67 KLVQLYAVVSEEP-IYIVTEYMSKG-------SLLDFLKGETGKYLRLPQLVDMAAQIAS 118
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 119 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 177
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 178 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 229
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++K+ H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKIRHE 73
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE+ ++ +Q+
Sbjct: 74 KLVQLYAVVSEE-PIYIVTEYMSKG-------SLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 184
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 185 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 73
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE+ ++ +Q+
Sbjct: 74 KLVQLYAVVSEE-PIYIVTEYMSKG-------SLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL N+LV N V K+ADFGLAR L YT ++ + AP
Sbjct: 126 GMAYVERMNYVHRDLAAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPIKWTAP 184
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 185 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 7/195 (3%)
Query: 7 LEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVK-ALRKLNHPNIIKL 65
L E+G GTCG V+K +T ++AVK+M+R E L ++ L+ + P I++
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 66 KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM-HRNGYFHR 124
N ++F E M + + Q P E + +++ L ++ ++G HR
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149
Query: 125 DLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL----QSSSYSPA 179
D+KP N+L+ +K+ DFG++ L Y APE + Y
Sbjct: 150 DVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIR 209
Query: 180 IDMWAVGAILAELFT 194
D+W++G L EL T
Sbjct: 210 ADVWSLGISLVELAT 224
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 123/305 (40%), Gaps = 56/305 (18%)
Query: 3 RYKILEELGDGTCGCV-----YKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL 57
R + LG G G V Y + VAVK +K + E + E+K L L
Sbjct: 42 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 101
Query: 58 -NHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPF-----------------S 98
NH NI+ L I EY + +L + +R ++ F
Sbjct: 102 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 161
Query: 99 EGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE 157
++ SF Q+ +G+A + HRDL N+L+T+ + KI DFGLAR++ + Y
Sbjct: 162 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 221
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
+ R + APE + + Y+ D+W+ G L ELF+L
Sbjct: 222 KGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSL------------------- 261
Query: 215 LGAPDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTA 274
G+ + P + ++I + + P +A E D++ DPL+RPT
Sbjct: 262 -GSSPYPGMPVDSKFYKMIKEGFRMLSP-------EHAPAEMYDIMKTCWDADPLKRPTF 313
Query: 275 DQALQ 279
Q +Q
Sbjct: 314 KQIVQ 318
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 123/305 (40%), Gaps = 56/305 (18%)
Query: 3 RYKILEELGDGTCGCV-----YKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL 57
R + LG G G V Y + VAVK +K + E + E+K L L
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 106
Query: 58 -NHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPF-----------------S 98
NH NI+ L I EY + +L + +R ++ F
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 99 EGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE 157
++ SF Q+ +G+A + HRDL N+L+T+ + KI DFGLAR++ + Y
Sbjct: 167 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 226
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
+ R + APE + + Y+ D+W+ G L ELF+L
Sbjct: 227 KGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSL------------------- 266
Query: 215 LGAPDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTA 274
G+ + P + ++I + + P +A E D++ DPL+RPT
Sbjct: 267 -GSSPYPGMPVDSKFYKMIKEGFRMLSP-------EHAPAEMYDIMKTCWDADPLKRPTF 318
Query: 275 DQALQ 279
Q +Q
Sbjct: 319 KQIVQ 323
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR---EVKALRKLNHPNIIKL 65
++G+G G VYK + T VAVKK+ E + + E+K + K H N+++L
Sbjct: 32 KMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 66 KEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQ-MLQGLAHMHRNGYF 122
+ ++L ++ YM + L + P +R ++Q G+ +H N +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 149
Query: 123 HRDLKPENLLVTND-VLKIADFGLAR---ELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+K N+L+ KI+DFGLAR + + V T Y APE L +P
Sbjct: 150 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL--RGEITP 207
Query: 179 AIDMWAVGAILAELFTLSP 197
D+++ G +L E+ T P
Sbjct: 208 KSDIYSFGVVLLEIITGLP 226
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 118/251 (47%), Gaps = 32/251 (12%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R K+ + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFS-EGEIRSFMS-- 107
+ H N++ L + L I E+ + NL +R ++ +P+ E + F++
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 108 -------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYV 159
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 160 STRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLYKV 211
R + APE + Y+ D+W+ G +L E+F+L SP +PG D E + K
Sbjct: 209 DARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFCRRLKE 266
Query: 212 CCILGAPDWTA 222
+ APD+T
Sbjct: 267 GTRMRAPDYTT 277
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 50 EVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHN--LYHI--MRERQIPFSEGEIRSF 105
E K L K++ I+ L +L + M YHI + E F E +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTE-YVSTRW 163
+Q++ GL H+H+ +RDLKPEN+L+ +D ++I+D GLA EL + T+ Y T
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSE 204
+ APE+LL Y ++D +A+G L E+ F E
Sbjct: 355 FMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
++ + ELG G G V+K + + ++A K + + +RE++ L + N P I+
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 64 KLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH-RNGYF 122
+ E+ E+M+ + ++ E + +++GL ++ ++
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 130
Query: 123 HRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAID 181
HRD+KP N+LV + +K+ DFG++ +L E+V TR Y +PE LQ + YS D
Sbjct: 131 HRDVKPSNILVNSRGEIKLCDFGVSGQLID-EMANEFVGTRSYMSPE-RLQGTHYSVQSD 188
Query: 182 MWAVGAILAEL 192
+W++G L E+
Sbjct: 189 IWSMGLSLVEM 199
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR---EVKALRKLNHPNIIKL 65
++G+G G VYK + T VAVKK+ E + + E+K + K H N+++L
Sbjct: 38 KMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 66 KEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQ-MLQGLAHMHRNGYF 122
+ ++L ++ YM + L + P +R ++Q G+ +H N +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 123 HRDLKPENLLVTND-VLKIADFGLAR---ELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRD+K N+L+ KI+DFGLAR + + V T Y APE L +P
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL--RGEITP 213
Query: 179 AIDMWAVGAILAELFTLSP 197
D+++ G +L E+ T P
Sbjct: 214 KSDIYSFGVVLLEIITGLP 232
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 24/168 (14%)
Query: 48 LREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM- 106
L+E + ++KL H +++L VV E ++ + EYM + + F +GE+ ++
Sbjct: 228 LQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMS-------KGSLLDFLKGEMGKYLR 279
Query: 107 --------SQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
+Q+ G+A++ R Y HRDL+ N+LV N V K+ADFGL R L YT
Sbjct: 280 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGR-LIEDNEYTA 338
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG 201
++ + APE L ++ D+W+ G +L EL T + +PG
Sbjct: 339 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 140/326 (42%), Gaps = 53/326 (16%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
++ ++GDGT G V +++ + AVK + R + + E L+K+ + +I
Sbjct: 39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVV-RNIKKYTRSAKI-EADILKKIQNDDINNN 96
Query: 66 KEVVRENNELFF-----IFEYMEHNLYHIM-RERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
V +++ IFE + +LY I+ R F +I+ + ++L+ L ++ +
Sbjct: 97 NIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM 156
Query: 120 GYFHRDLKPENLLVTN--------------------------DVLKIADFGLARELSSMP 153
H DLKPEN+L+ + +K+ DFG A S
Sbjct: 157 SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY- 215
Query: 154 PYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCC 213
+ ++TR YRAPEV+L + + + DMW+ G +LAEL+T S +F ++ L +
Sbjct: 216 -HGSIINTRQYRAPEVIL-NLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMES 273
Query: 214 ILGAPDWTAFPEATNISRLISISYSEIL---PINLSDIIPNASMEA-------------I 257
I+ EAT + ++ E+ P N S I ++
Sbjct: 274 IIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFC 333
Query: 258 DLIWQLCSWDPLRRPTADQALQHPFF 283
D ++ + DP RP+ + L+H F
Sbjct: 334 DFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 50 EVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHN--LYHI--MRERQIPFSEGEIRSF 105
E K L K++ I+ L +L + M YHI + E F E +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTE-YVSTRW 163
+Q++ GL H+H+ +RDLKPEN+L+ +D ++I+D GLA EL + T+ Y T
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSE 204
+ APE+LL Y ++D +A+G L E+ F E
Sbjct: 355 FMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 32/252 (12%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R K+ + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFS---EGEIRSFMS 107
+ H N++ L + L I E+ + NL +R ++ +P+ E + F++
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 108 ---------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P Y
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG---DSEIDQLYK 210
R + APE + Y+ D+W+ G +L E+F+L +PG D E + K
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 211 VCCILGAPDWTA 222
+ APD+T
Sbjct: 257 EGTRMRAPDYTT 268
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 50 EVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHN--LYHI--MRERQIPFSEGEIRSF 105
E K L K++ I+ L +L + M YHI + E F E +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTE-YVSTRW 163
+Q++ GL H+H+ +RDLKPEN+L+ +D ++I+D GLA EL + T+ Y T
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSE 204
+ APE+LL Y ++D +A+G L E+ F E
Sbjct: 355 FMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 50 EVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHN--LYHI--MRERQIPFSEGEIRSF 105
E K L K++ I+ L +L + M YHI + E F E +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTE-YVSTRW 163
+Q++ GL H+H+ +RDLKPEN+L+ +D ++I+D GLA EL + T+ Y T
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSE 204
+ APE+LL Y ++D +A+G L E+ F E
Sbjct: 355 FMAPELLL-GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 32/252 (12%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R K+ + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFS---EGEIRSFMS 107
+ H N++ L + L I E+ + NL +R ++ +P+ E + F++
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 108 ---------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P Y
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG---DSEIDQLYK 210
R + APE + Y+ D+W+ G +L E+F+L +PG D E + K
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 211 VCCILGAPDWTA 222
+ APD+T
Sbjct: 257 EGTRMRAPDYTT 268
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 73
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE+ ++ +Q+
Sbjct: 74 KLVQLYAVVSEE-PIYIVIEYMSKGSL-------LDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVST---RWYRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR + + +W AP
Sbjct: 126 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAP 184
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 185 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 236
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 101/249 (40%), Gaps = 35/249 (14%)
Query: 44 ECMNLREVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGE 101
E M L E + L K+N ++ L + L + M +HI Q F E
Sbjct: 228 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEAR 287
Query: 102 IRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVS 160
+ +++ GL +HR +RDLKPEN+L+ + ++I+D GLA + V
Sbjct: 288 AVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVG 347
Query: 161 TRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDW 220
T Y APEV +++ Y+ + D WA+G +L E+ G S Q K
Sbjct: 348 TVGYMAPEV-VKNERYTFSPDWWALGCLLYEMIA------GQSPFQQRKKK--------- 391
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRR-----PTAD 275
E + + + YSE S +A L QL DP R +A
Sbjct: 392 IKREEVERLVKEVPEEYSERF-----------SPQARSLCSQLLCKDPAERLGCRGGSAR 440
Query: 276 QALQHPFFN 284
+ +HP F
Sbjct: 441 EVKEHPLFK 449
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 51/325 (15%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN- 61
RY ++ +LG G V+ A ++ VA+K ++ + E + E+K L+++N +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED--EIKLLQRVNDADN 77
Query: 62 ----------IIKLKEVVRENN----ELFFIFEYMEHNLYHIMRE---RQIPFSEGEIRS 104
I+KL + + +FE + NL ++++ R IP ++
Sbjct: 78 TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY--VKQ 135
Query: 105 FMSQMLQGLAHMHRN-GYFHRDLKPENLLVT------NDV-LKIADFGLARELSSMPPYT 156
Q+L GL +MHR G H D+KPEN+L+ N + +KIAD G A YT
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YT 193
Query: 157 EYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGD------SEIDQLYK 210
+ TR YR+PEVLL + + D+W+ ++ EL T +F D + D + +
Sbjct: 194 NSIQTREYRSPEVLL-GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 252
Query: 211 VCCILGA-PDW----TAFPEATNISRLISISYSEILPINLSDII-------PNASMEAID 258
+ +LG P + + SR + + S++ L D++ + + E D
Sbjct: 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD 312
Query: 259 LIWQLCSWDPLRRPTADQALQHPFF 283
+ + DP +R A + HP+
Sbjct: 313 FLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 32/250 (12%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R + + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFSEGEIRSFMS--- 107
+ H N++ L + L I E+ + NL +R ++ +P+ + + F++
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKD-LYKDFLTLEH 145
Query: 108 ------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVS 160
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P Y
Sbjct: 146 LICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 161 TRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLYKVC 212
R + APE + Y+ D+W+ G +L E+F+L SP +PG D E + K
Sbjct: 206 ARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFCRRLKEG 263
Query: 213 CILGAPDWTA 222
+ APD+T
Sbjct: 264 TRMRAPDYTT 273
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
I E++G G+ G V++A ++ M++ F+ LREV +++L HPNI+
Sbjct: 41 IKEKIGAGSFGTVHRA-EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 66 KEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIR--SFMSQMLQGLAHMHRNG-- 120
V + L + EY+ +LY ++ + E R S + +G+ ++H
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 121 YFHRDLKPENLLVTND-VLKIADFGLAR-ELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HRDLK NLLV +K+ DFGL+R + S T + APEVL S
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 179 AIDMWAVGAILAELFTL 195
+ D+++ G IL EL TL
Sbjct: 220 S-DVYSFGVILWELATL 235
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 122/305 (40%), Gaps = 56/305 (18%)
Query: 3 RYKILEELGDGTCGCV-----YKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKL 57
R + LG G G V Y + VAVK +K + E + E+K L L
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 106
Query: 58 -NHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPF-----------------S 98
NH NI+ L I EY + +L + +R ++ F
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 99 EGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE 157
++ SF Q+ +G+A + HRDL N+L+T+ + KI DFGLAR + + Y
Sbjct: 167 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVV 226
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCI 214
+ R + APE + + Y+ D+W+ G L ELF+L
Sbjct: 227 KGNARLPVKWMAPESIF-NCVYTFESDVWSYGIFLWELFSL------------------- 266
Query: 215 LGAPDWTAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTA 274
G+ + P + ++I + + P +A E D++ DPL+RPT
Sbjct: 267 -GSSPYPGMPVDSKFYKMIKEGFRMLSP-------EHAPAEMYDIMKTCWDADPLKRPTF 318
Query: 275 DQALQ 279
Q +Q
Sbjct: 319 KQIVQ 323
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 3 RYKILEELGDG-TCGCVYKAFNVETYEIVAVKKMKRKFYFWE--ECMNLREVKALRKLNH 59
+Y++L + G G C C +A T ++ A KK+++K E M L E + L K+N
Sbjct: 188 QYRVLGKGGFGEVCACQVRA----TGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 60 PNIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH 117
++ L + L + M +HI Q F E + +++ GL +H
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 118 RNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
R +RDLKPEN+L+ + ++I+D GLA + V T Y APEV +++ Y
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV-VKNERY 362
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISIS 236
+ + D WA+G +L E+ G S Q K E + + +
Sbjct: 363 TFSPDWWALGCLLYEMIA------GQSPFQQRKKK---------IKREEVERLVKEVPEE 407
Query: 237 YSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRR-----PTADQALQHPFFN 284
YSE S +A L QL DP R +A + +HP F
Sbjct: 408 YSERF-----------SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 51/325 (15%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPN- 61
RY ++ +LG G V+ A ++ VA+K ++ + E + E+K L+++N +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED--EIKLLQRVNDADN 77
Query: 62 ----------IIKLKEVVRENN----ELFFIFEYMEHNLYHIMRE---RQIPFSEGEIRS 104
I+KL + + +FE + NL ++++ R IP ++
Sbjct: 78 TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY--VKQ 135
Query: 105 FMSQMLQGLAHMHRN-GYFHRDLKPENLLVT------NDV-LKIADFGLARELSSMPPYT 156
Q+L GL +MHR G H D+KPEN+L+ N + +KIAD G A YT
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YT 193
Query: 157 EYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGD------SEIDQLYK 210
+ TR YR+PEVLL + + D+W+ ++ EL T +F D + D + +
Sbjct: 194 NSIQTREYRSPEVLL-GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 252
Query: 211 VCCILGA-PDW----TAFPEATNISRLISISYSEILPINLSDII-------PNASMEAID 258
+ +LG P + + SR + + S++ L D++ + + E D
Sbjct: 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD 312
Query: 259 LIWQLCSWDPLRRPTADQALQHPFF 283
+ + DP +R A + HP+
Sbjct: 313 FLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ ++ +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 123 HRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVST------RWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ + + T +W LQ+
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES--LQTQK 212
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL 65
I E++G G+ G V++A ++ M++ F+ LREV +++L HPNI+
Sbjct: 41 IKEKIGAGSFGTVHRA-EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 66 KEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIR--SFMSQMLQGLAHMHRNG-- 120
V + L + EY+ +LY ++ + E R S + +G+ ++H
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 121 YFHRDLKPENLLVTND-VLKIADFGLAR-ELSSMPPYTEYVSTRWYRAPEVLLQSSSYSP 178
HR+LK NLLV +K+ DFGL+R + S+ T + APEVL S
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 179 AIDMWAVGAILAELFTL 195
+ D+++ G IL EL TL
Sbjct: 220 S-DVYSFGVILWELATL 235
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 18/199 (9%)
Query: 10 LGDGTCGCVYKAFNVETYE---IVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLK 66
+G G G VY ++ + A+K + R + LRE +R LNHPN++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 67 EVVRENNEL-FFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHR 124
++ L + YM H +L +R Q + ++ SF Q+ +G+ ++ + HR
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148
Query: 125 DLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRWYRAPEV--------LLQSSS 175
DL N ++ +K+ADFGLAR++ EY S + +R + LQ+
Sbjct: 149 DLAARNCMLDESFTVKVADFGLARDILD----REYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 176 YSPAIDMWAVGAILAELFT 194
++ D+W+ G +L EL T
Sbjct: 205 FTTKSDVWSFGVLLWELLT 223
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 70
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E ++ + EYM + F +GE ++ +Q+
Sbjct: 71 KLVQLYAVVSEE-PIYIVTEYMNKGSL-------LDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR L +T ++ + AP
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEWTARQGAKFPIKWTAP 181
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 182 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 233
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 2 ERY-KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
ER+ K + +LG G G C Y T +VAVK+++ + RE++ L+
Sbjct: 9 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKA 67
Query: 57 LNHPNIIKLKEVVRE--NNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
L+ I+K + V L + EY+ L ++ + + + SQ+ +G+
Sbjct: 68 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 127
Query: 114 AHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ HRDL N+LV ++ +KIADFGLA+ L P +Y R WY
Sbjct: 128 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWY 184
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + +S D+W+ G +L ELFT
Sbjct: 185 -APES-LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 55/305 (18%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN------LREVKALRKL 57
Y IL+++G G V++ N E +I A+K + EE N E+ L KL
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKL 67
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
II+L + + ++ + E +L +++++ E +S+ ML+ +
Sbjct: 68 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHT 126
Query: 116 MHRNGYFHRDLKPENLLVTNDVLKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQ 172
+H++G H DLKP N L+ + +LK+ DFG+A ++ ++ V T Y PE +
Sbjct: 127 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 173 SSS----------YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTA 222
SS SP D+W++G IL + P I+Q+ K+ I+
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAIIDPNHEIE 244
Query: 223 FPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
FP+ IP ++ D++ DP +R + + L HP+
Sbjct: 245 FPD-----------------------IPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPY 279
Query: 283 FNVET 287
++T
Sbjct: 280 VQIQT 284
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 2 ERY-KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
ER+ K + +LG G G C Y T +VAVK+++ + RE++ L+
Sbjct: 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKA 80
Query: 57 LNHPNIIKLKEVVRE--NNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
L+ I+K + V L + EY+ L ++ + + + SQ+ +G+
Sbjct: 81 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 140
Query: 114 AHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ HRDL N+LV ++ +KIADFGLA+ L P +Y R WY
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWY 197
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + +S D+W+ G +L ELFT
Sbjct: 198 -APES-LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 2 ERY-KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
ER+ K + +LG G G C Y T +VAVK+++ + RE++ L+
Sbjct: 10 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKA 68
Query: 57 LNHPNIIKLKEVVRE--NNELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
L+ I+K + V L + EY+ L ++ + + + SQ+ +G+
Sbjct: 69 LHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 128
Query: 114 AHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ HRDL N+LV ++ +KIADFGLA+ L P +Y R WY
Sbjct: 129 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREPGQSPIFWY 185
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + +S D+W+ G +L ELFT
Sbjct: 186 -APES-LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNII 63
++ + ELG G G V+K + + ++A K + + +RE++ L + N P I+
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 64 KLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH-RNGYF 122
+ E+ E+M+ + ++ E + +++GL ++ ++
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIM 146
Query: 123 HRDLKPENLLV-TNDVLKIADFGLAREL-SSMPPYTEYVSTRWYRAPEVLLQSSSYSPAI 180
HRD+KP N+LV + +K+ DFG++ +L SM +V TR Y +PE LQ + YS
Sbjct: 147 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPE-RLQGTHYSVQS 203
Query: 181 DMWAVGAILAEL 192
D+W++G L E+
Sbjct: 204 DIWSMGLSLVEM 215
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 34/253 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R K+ + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFS---EGEIRSFMS 107
+ H N++ L + L I E+ + NL +R ++ +P+ E + F++
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 108 ---------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLY 209
R + APE + Y+ D+W+ G +L E+F+L SP +PG D E +
Sbjct: 207 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFCRRL 264
Query: 210 KVCCILGAPDWTA 222
K + APD+T
Sbjct: 265 KEGTRMRAPDYTT 277
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 55/305 (18%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN------LREVKALRKL 57
Y IL+++G G V++ N E +I A+K + EE N E+ L KL
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKL 63
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
II+L + + ++ + E +L +++++ E +S+ ML+ +
Sbjct: 64 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHT 122
Query: 116 MHRNGYFHRDLKPENLLVTNDVLKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQ 172
+H++G H DLKP N L+ + +LK+ DFG+A ++ ++ V T Y PE +
Sbjct: 123 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 173 SSS----------YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTA 222
SS SP D+W++G IL + P I+Q+ K+ I+
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAIIDPNHEIE 240
Query: 223 FPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
FP+ IP ++ D++ DP +R + + L HP+
Sbjct: 241 FPD-----------------------IPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPY 275
Query: 283 FNVET 287
++T
Sbjct: 276 VQIQT 280
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 55/305 (18%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN------LREVKALRKL 57
Y IL+++G G V++ N E +I A+K + EE N E+ L KL
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKL 111
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
II+L + + ++ + E +L +++++ E +S+ ML+ +
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHT 170
Query: 116 MHRNGYFHRDLKPENLLVTNDVLKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQ 172
+H++G H DLKP N L+ + +LK+ DFG+A ++ ++ V T Y PE +
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 173 SSS----------YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTA 222
SS SP D+W++G IL + P I+Q+ K+ I+
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288
Query: 223 FPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
FP+ IP ++ D++ DP +R + + L HP+
Sbjct: 289 FPD-----------------------IPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPY 323
Query: 283 FNVET 287
++T
Sbjct: 324 VQIQT 328
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE---ECMNLREVKALRKLNHP 60
+ L LG G+ G V + T E+ AVK +K+ + EC + + P
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 61 NIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
+ +L + + L+F+ EY+ +YHI + + F E + +++ GL +
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQS 460
Query: 119 NGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
G +RDLK +N+++ ++ +KIADFG+ +E + + T Y APE++ Y
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP-Y 519
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
++D WA G +L E+ F G+ E D+L++
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQ 552
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVK-ALRKLNHPNIIKLKE 67
ELG G G V K +V + +I+AVK+++ E+ L ++ ++R ++ P +
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 68 VVRENNELFFIFEYMEHNL---YHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN-GYFH 123
+ +++ E M+ +L Y + ++ E + +++ L H+H H
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 133
Query: 124 RDLKPENLLVTN-DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL---LQSSSYSPA 179
RD+KP N+L+ +K+ DFG++ L + Y APE + L YS
Sbjct: 134 RDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVK 193
Query: 180 IDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDW-TAFPEATNISRLISISYS 238
D+W++G + EL L FP DS W T F + + S
Sbjct: 194 SDIWSLGITMIELAILR--FPYDS----------------WGTPFQQLKQVVE----EPS 231
Query: 239 EILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
LP + S E +D Q + RPT + +QHPFF +
Sbjct: 232 PQLPAD------KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 55/305 (18%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN------LREVKALRKL 57
Y IL+++G G V++ N E +I A+K + EE N E+ L KL
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKL 83
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
II+L + + ++ + E +L +++++ E +S+ ML+ +
Sbjct: 84 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHT 142
Query: 116 MHRNGYFHRDLKPENLLVTNDVLKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQ 172
+H++G H DLKP N L+ + +LK+ DFG+A ++ ++ V T Y PE +
Sbjct: 143 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 173 SSS----------YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTA 222
SS SP D+W++G IL + P I+Q+ K+ I+
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAIIDPNHEIE 260
Query: 223 FPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
FP+ IP ++ D++ DP +R + + L HP+
Sbjct: 261 FPD-----------------------IPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPY 295
Query: 283 FNVET 287
++T
Sbjct: 296 VQIQT 300
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 11/214 (5%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE---ECMNLREVKALRKLNHP 60
+ L LG G+ G V + T E+ AVK +K+ + EC + + P
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 61 NIIKLKEVVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHR 118
+ +L + + L+F+ EY+ +YHI + + F E + +++ GL +
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQS 139
Query: 119 NGYFHRDLKPENLLVTNDV-LKIADFGLARE-LSSMPPYTEYVSTRWYRAPEVLLQSSSY 176
G +RDLK +N+++ ++ +KIADFG+ +E + + T Y APE++ Y
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQPY 198
Query: 177 SPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYK 210
++D WA G +L E+ F G+ E D+L++
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQ 231
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 34/253 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R K+ + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFS---EGEIRSFMS 107
+ H N++ L + L I E+ + NL +R ++ +P+ E + F++
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 108 ---------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLY 209
R + APE + Y+ D+W+ G +L E+F+L SP +PG D E +
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFCRRL 255
Query: 210 KVCCILGAPDWTA 222
K + APD+T
Sbjct: 256 KEGTRMRAPDYTT 268
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRS--FMSQMLQ-- 111
N ++++L VV + I E M +L +R + + + + +S+M+Q
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144
Query: 112 -----GLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
G+A+++ N + HRDL N +V D +KI DFG+ R++ Y + +
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 205 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 237
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 55/305 (18%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN------LREVKALRKL 57
Y IL+++G G V++ N E +I A+K + EE N E+ L KL
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKL 64
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
II+L + + ++ + E +L +++++ E +S+ ML+ +
Sbjct: 65 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHT 123
Query: 116 MHRNGYFHRDLKPENLLVTNDVLKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQ 172
+H++G H DLKP N L+ + +LK+ DFG+A ++ ++ V T Y PE +
Sbjct: 124 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 173 SSS----------YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTA 222
SS SP D+W++G IL + P I+Q+ K+ I+
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAIIDPNHEIE 241
Query: 223 FPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
FP+ IP ++ D++ DP +R + + L HP+
Sbjct: 242 FPD-----------------------IPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPY 276
Query: 283 FNVET 287
++T
Sbjct: 277 VQIQT 281
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 59/307 (19%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN------LREVKALRKL 57
Y IL+++G G V++ N E +I A+K + EE N E+ L KL
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKL 111
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
II+L + + ++ + E +L +++++ E +S+ ML+ +
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHT 170
Query: 116 MHRNGYFHRDLKPENLLVTNDVLKIADFGLARELSSMPPYTEY-----VSTRWYRAPEVL 170
+H++G H DLKP N L+ + +LK+ DFG+A ++ P T V T Y PE +
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQM--QPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 171 LQSSS----------YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDW 220
SS SP D+W++G IL + P I+Q+ K+ I+
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAIIDPNHE 286
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
FP+ IP ++ D++ DP +R + + L H
Sbjct: 287 IEFPD-----------------------IPEKDLQ--DVLKCCLKRDPKQRISIPELLAH 321
Query: 281 PFFNVET 287
P+ ++T
Sbjct: 322 PYVQIQT 328
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 8 EELGDGTCGCVYKA--FNVETYEIV---AVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
+ LG G G V +A F + + V AVK +K + E+ + E+K + L H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMR---------ERQIPFSEGEIRSFMSQMLQ 111
I+ L + I EY + +L + +R E P ++ F SQ+ Q
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 112 GLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A + HRD+ N+L+TN V KI DFGLAR++ + Y + R + AP
Sbjct: 164 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 223
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLS-PIFPGDSEIDQLYKV 211
E + Y+ D+W+ G +L E+F+L +PG + YK+
Sbjct: 224 ESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 267
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 34/253 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R K+ + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFS---EGEIRSFMS 107
+ H N++ L + L I E+ + NL +R ++ +P+ E + F++
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 108 ---------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLY 209
R + APE + Y+ D+W+ G +L E+F+L SP +PG D E +
Sbjct: 207 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFCRRL 264
Query: 210 KVCCILGAPDWTA 222
K + APD+T
Sbjct: 265 KEGTRMRAPDYTT 277
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 28/231 (12%)
Query: 8 EELGDGTCGCVYKA--FNVETYEIV---AVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
+ LG G G V +A F + + V AVK +K + E+ + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIP---------------FSEGEIRSF 105
I+ L + I EY + +L + +R ++ P S ++ F
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW- 163
SQ+ QG+A + HRD+ N+L+TN V KI DFGLAR++ + Y + R
Sbjct: 172 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 231
Query: 164 --YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS-PIFPGDSEIDQLYKV 211
+ APE + Y+ D+W+ G +L E+F+L +PG + YK+
Sbjct: 232 VKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 281
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 15 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 74
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRS--FMSQMLQ-- 111
N ++++L VV + I E M +L +R + + + + +S+M+Q
Sbjct: 75 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 134
Query: 112 -----GLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
G+A+++ N + HRDL N +V D +KI DFG+ R++ Y + +
Sbjct: 135 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 194
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 195 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 227
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIK 64
+ + +G G+ G VYK + + VAVK + ++ + EV LRK H NI+
Sbjct: 28 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL- 83
Query: 65 LKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFH 123
L +L + ++ E +LYH + + F ++ Q +G+ ++H H
Sbjct: 84 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 124 RDLKPENLLVTND-VLKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS--YS 177
RDLK N+ + D +KI DFGLA E S + + + + APEV+ S YS
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 178 PAIDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 204 FQSDVYAFGIVLYELMT 220
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 34/253 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R K+ + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFS---EGEIRSFMS 107
+ H N++ L + L I E+ + NL +R ++ +P+ E + F++
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 108 ---------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE 157
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLY 209
R + APE + Y+ D+W+ G +L E+F+L SP +PG D E +
Sbjct: 198 KGDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFCRRL 255
Query: 210 KVCCILGAPDWTA 222
K + APD+T
Sbjct: 256 KEGTRMRAPDYTT 268
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 5 KILEELGDGTCGCVYKAFNV-----ETYEIVAVKKMKRKFY--FWEECMNLREVKALR-K 56
+ +EELG+ G VYK E + VA+K +K K EE R LR +
Sbjct: 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE---FRHEAMLRAR 85
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSE----------------G 100
L HPN++ L VV ++ L IF Y H H + P S+
Sbjct: 86 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 145
Query: 101 EIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPY---- 155
+ ++Q+ G+ ++ + H+DL N+LV + + +KI+D GL RE+ + Y
Sbjct: 146 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 156 TEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
+ RW APE ++ +S D+W+ G +L E+F+
Sbjct: 206 NSLLPIRWM-APEAIMY-GKFSIDSDIWSYGVVLWEVFS 242
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQ---------IPFSEGEIRSFM 106
N ++++L VV + I E M +L +R + P S ++
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 144
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
++ G+A+++ N + HRDL N +V D +KI DFG+ R++ Y + +
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 205 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 237
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 2 ERY-KILEELGDGTCG----CVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
ER+ K + +LG G G C Y T +VAVK+++ + RE++ L+
Sbjct: 6 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKA 64
Query: 57 LNHPNIIKLKEVVRENN--ELFFIFEYMEHN-LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
L+ I+K + V EL + EY+ L ++ + + + SQ+ +G+
Sbjct: 65 LHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 124
Query: 114 AHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTR--------WY 164
++ HRDL N+LV ++ +KIADFGLA+ L P + R WY
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDXXVVREPGQSPIFWY 181
Query: 165 RAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
APE L + +S D+W+ G +L ELFT
Sbjct: 182 -APES-LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 16 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 75
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQ---------IPFSEGEIRSFM 106
N ++++L VV + I E M +L +R + P S ++
Sbjct: 76 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 135
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
++ G+A+++ N + HRDL N +V D +KI DFG+ R++ Y + +
Sbjct: 136 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 196 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQ---------IPFSEGEIRSFM 106
N ++++L VV + I E M +L +R + P S ++
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
++ G+A+++ N + HRDL N +V D +KI DFG+ R++ Y + +
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 198 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 230
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 2 ERYKILEELGDGTCGCVYKA--FNVE---TYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
+R + + LG G G V +A F ++ T VAVK +K E + E+K L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 57 LNHP-NIIKL-KEVVRENNELFFIFEYME-HNLYHIMRERQ---IPFSEGE--IRSFMS- 107
+ H N++ L + L I E+ + NL +R ++ +P+ E + F++
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 108 --------QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEY 158
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 159 VSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLYK 210
R + APE + Y+ D+W+ G +L E+F+L SP +PG D E + K
Sbjct: 208 GDARLPLKWMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFCRRLK 265
Query: 211 VCCILGAPDWTA 222
+ APD+T
Sbjct: 266 EGTRMRAPDYTT 277
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 34/219 (15%)
Query: 5 KILEELGDGTCGCVYKAFNV-----ETYEIVAVKKMKRKFY--FWEECMNLREVKALR-K 56
+ +EELG+ G VYK E + VA+K +K K EE R LR +
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE---FRHEAMLRAR 68
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSE----------------G 100
L HPN++ L VV ++ L IF Y H H + P S+
Sbjct: 69 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 101 EIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPY---- 155
+ ++Q+ G+ ++ + H+DL N+LV + + +KI+D GL RE+ + Y
Sbjct: 129 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 156 TEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFT 194
+ RW APE ++ +S D+W+ G +L E+F+
Sbjct: 189 NSLLPIRWM-APEAIMY-GKFSIDSDIWSYGVVLWEVFS 225
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQ---------IPFSEGEIRSFM 106
N ++++L VV + I E M +L +R + P S ++
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
++ G+A+++ N + HRDL N +V D +KI DFG+ R++ Y + +
Sbjct: 132 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 192 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQ---------IPFSEGEIRSFM 106
N ++++L VV + I E M +L +R + P S ++
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
++ G+A+++ N + HRDL N +V D +KI DFG+ R++ Y + +
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 198 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 230
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 128/305 (41%), Gaps = 55/305 (18%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN------LREVKALRKL 57
Y IL+++G G V++ N E +I A+K + EE N E+ L KL
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKL 83
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
II+L + + ++ + E +L +++++ E +S+ ML+ +
Sbjct: 84 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHT 142
Query: 116 MHRNGYFHRDLKPENLLVTNDVLKIADFGLARELS---SMPPYTEYVSTRWYRAPEVLLQ 172
+H++G H DLKP N L+ + +LK+ DFG+A ++ V T Y PE +
Sbjct: 143 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 173 SSS----------YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTA 222
SS SP D+W++G IL + P I+Q+ K+ I+
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAIIDPNHEIE 260
Query: 223 FPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPF 282
FP+ IP ++ D++ DP +R + + L HP+
Sbjct: 261 FPD-----------------------IPEKDLQ--DVLKCCLKRDPKQRISIPELLAHPY 295
Query: 283 FNVET 287
++T
Sbjct: 296 VQIQT 300
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQ---------IPFSEGEIRSFM 106
N ++++L VV + I E M +L +R + P S ++
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
++ G+A+++ N + HRDL N +V D +KI DFG+ R++ Y + +
Sbjct: 139 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 198
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 199 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 231
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIK 64
+ + +G G+ G VYK + + VAVK + ++ + EV LRK H NI+
Sbjct: 28 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL- 83
Query: 65 LKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFH 123
L +L + ++ E +LYH + + F ++ Q +G+ ++H H
Sbjct: 84 LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 143
Query: 124 RDLKPENLLVTND-VLKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS--YS 177
RDLK N+ + D +KI DFGLA E S + + + + APEV+ S YS
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 178 PAIDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 204 FQSDVYAFGIVLYELMT 220
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 8 EELGDGTCGCVYKA--FNVETYEIV---AVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
+ LG G G V +A F + + V AVK +K + E+ + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMR---------ERQIPFSEGEIRSFMSQMLQ 111
I+ L + I EY + +L + +R E P ++ F SQ+ Q
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 112 GLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW---YRAP 167
G+A + HRD+ N+L+TN V KI DFGLAR++ + Y + R + AP
Sbjct: 172 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 231
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLS-PIFPGDSEIDQLYKV 211
E + Y+ D+W+ G +L E+F+L +PG + YK+
Sbjct: 232 ESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 275
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ + +
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 214
Query: 123 HRDLKPENLLVTND-VLKIADFGLAREL------SSMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ S + +W LQ+
Sbjct: 215 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 272
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 273 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 304
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 129/307 (42%), Gaps = 59/307 (19%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN------LREVKALRKL 57
Y IL+++G G V++ N E +I A+K + EE N E+ L KL
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKL 111
Query: 58 NH--PNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAH 115
II+L + + ++ + E +L +++++ E +S+ ML+ +
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHT 170
Query: 116 MHRNGYFHRDLKPENLLVTNDVLKIADFGLARELSSMPPYTEYVSTRW-----YRAPEVL 170
+H++G H DLKP N L+ + +LK+ DFG+A ++ P T V Y PE +
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQM--QPDTTSVVKDSQVGAVNYMPPEAI 228
Query: 171 LQSSS----------YSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDW 220
SS SP D+W++G IL + P I+Q+ K+ I+
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCIL--YYMTYGKTPFQQIINQISKLHAIIDPNHE 286
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
FP+ IP ++ D++ DP +R + + L H
Sbjct: 287 IEFPD-----------------------IPEKDLQ--DVLKCCLKRDPKQRISIPELLAH 321
Query: 281 PFFNVET 287
P+ ++T
Sbjct: 322 PYVQIQT 328
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ + +
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 160
Query: 123 HRDLKPENLLVTND-VLKIADFGLAREL------SSMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ S + +W LQ+
Sbjct: 161 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 218
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 219 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 250
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ + +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 123 HRDLKPENLLVTND-VLKIADFGLAREL------SSMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ S + +W LQ+
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 213
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 47 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 106
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQ---------IPFSEGEIRSFM 106
N ++++L VV + I E M +L +R + P S ++
Sbjct: 107 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 166
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
++ G+A+++ N + HRDL N +V D +KI DFG+ R++ Y + +
Sbjct: 167 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 226
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 227 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 259
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ + +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 123 HRDLKPENLLVTND-VLKIADFGLAREL------SSMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ S + +W LQ+
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES--LQTQK 214
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 246
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ERYKILEELGDGTCGCVYKA-FNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
E ++ +LG G G V+ +N T VA+K +K E L+E + ++KL H
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAF--LQEAQVMKKLRHE 63
Query: 61 NIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFM---------SQMLQ 111
+++L VV E + + EYM + F +GE ++ +Q+
Sbjct: 64 KLVQLYAVVSEEP-IXIVTEYMSKGSL-------LDFLKGETGKYLRLPQLVDMAAQIAS 115
Query: 112 GLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVST---RWYRAP 167
G+A++ R Y HRDL+ N+LV N V K+ADFGLAR + + +W AP
Sbjct: 116 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAP 174
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPGD------SEIDQLYKVCC 213
E L ++ D+W+ G +L EL T + +PG ++++ Y++ C
Sbjct: 175 EAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 226
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ + +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 123 HRDLKPENLLVTND-VLKIADFGLAREL------SSMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ S + +W LQ+
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 213
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 245
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ + +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 123 HRDLKPENLLVTND-VLKIADFGLAREL------SSMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ S + +W LQ+
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 214
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 246
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 8 EELGDGTCGCVYKA--FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
E +G G GCVY + + +I AVK + R E L E ++ +HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 65 LKEV-VRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYF 122
L + +R + YM+H +L + +R + ++ F Q+ +G+ + +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 153
Query: 123 HRDLKPENLLVTND-VLKIADFGLAREL------SSMPPYTEYVSTRWYRAPEVLLQSSS 175
HRDL N ++ +K+ADFGLAR++ S + +W LQ+
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQK 211
Query: 176 YSPAIDMWAVGAILAELFTL-SPIFPGDSEID 206
++ D+W+ G +L EL T +P +P + D
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 243
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIK 64
+ + +G G+ G VYK + + VAVK + ++ + EV LRK H NI+
Sbjct: 16 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL- 71
Query: 65 LKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFH 123
L +L + ++ E +LYH + + F ++ Q +G+ ++H H
Sbjct: 72 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIH 131
Query: 124 RDLKPENLLVTND-VLKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSSS--YS 177
RDLK N+ + D +KI DFGLA S + + + + APEV+ S YS
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 178 PAIDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 192 FQSDVYAFGIVLYELMT 208
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 11 GDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR---EVKALRKLNHPNIIKLKE 67
G+G G VYK + T VAVKK+ E + + E+K K H N+++L
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 68 VVRENNELFFIFEYMEHN--LYHIMRERQIPFSEGEIRSFMSQ-MLQGLAHMHRNGYFHR 124
+ ++L ++ Y + L + P R ++Q G+ +H N + HR
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHR 148
Query: 125 DLKPENLLVTND-VLKIADFGLAR---ELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAI 180
D+K N+L+ KI+DFGLAR + + + V T Y APE L +P
Sbjct: 149 DIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL--RGEITPKS 206
Query: 181 DMWAVGAILAELFTLSP 197
D+++ G +L E+ T P
Sbjct: 207 DIYSFGVVLLEIITGLP 223
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 8 EELGDGTCGCVYKA--FNVETYEIV---AVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
+ LG G G V +A F + + V AVK +K + E+ + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQ----------IPFSEGEIRS---FMS 107
I+ L + I EY + +L + +R + I S R F S
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 108 QMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW--- 163
Q+ QG+A + HRD+ N+L+TN V KI DFGLAR++ + Y + R
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 231
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS-PIFPGDSEIDQLYKV 211
+ APE + Y+ D+W+ G +L E+F+L +PG + YK+
Sbjct: 232 WMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQ---------IPFSEGEIRSFM 106
N ++++L VV + I E M +L +R + P S ++
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
++ G+A+++ N + HRDL N V D +KI DFG+ R++ Y + +
Sbjct: 132 GEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 192 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 224
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 10 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 69
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQ---------IPFSEGEIRSFM 106
N ++++L VV + I E M +L +R + P S ++
Sbjct: 70 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 129
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
++ G+A+++ N + HRDL N +V D +KI DFG+ R++ + +
Sbjct: 130 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 189
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 190 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 2 ERYKILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRK 56
E+ + ELG G+ G VY+ E VA+K + E L E +++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 57 LNHPNIIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQ---------IPFSEGEIRSFM 106
N ++++L VV + I E M +L +R + P S ++
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 107 SQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE----YVST 161
++ G+A+++ N + HRDL N +V D +KI DFG+ R++ + +
Sbjct: 139 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 198
Query: 162 RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
RW +PE L+ ++ D+W+ G +L E+ TL+
Sbjct: 199 RWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLA 231
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 12/195 (6%)
Query: 8 EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIKLK 66
+ +G G+ G VYK + + VAVK + ++ + EV LRK H NI+ L
Sbjct: 14 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 69
Query: 67 EVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRD 125
+L + ++ E +LYH + + F ++ Q QG+ ++H HRD
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 126 LKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS--YSPA 179
LK N+ + D+ +KI DFGLA E S + + + + APEV+ YS
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 180 IDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 190 SDVYAFGIVLYELMT 204
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 8 EELGDGTCGCVYKA--FNVETYEIV---AVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
+ LG G G V +A F + + V AVK +K + E+ + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRER-------------QIPFSEGEIRSFMS 107
I+ L + I EY + +L + +R + S ++ F S
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 108 QMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTRW--- 163
Q+ QG+A + HRD+ N+L+TN V KI DFGLAR++ + Y + R
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 231
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS-PIFPGDSEIDQLYKV 211
+ APE + Y+ D+W+ G +L E+F+L +PG + YK+
Sbjct: 232 WMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIK 64
+ + +G G+ G VYK + + VAVK + ++ + EV LRK H NI+
Sbjct: 40 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL- 95
Query: 65 LKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFH 123
L +L + ++ E +LYH + + F ++ Q QG+ ++H H
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 124 RDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS--YS 177
RDLK N+ + D+ +KI DFGLA E S + + + + APEV+ YS
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 178 PAIDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 216 FQSDVYAFGIVLYELMT 232
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIK 64
+ + +G G+ G VYK + + VAVK + ++ + EV LRK H NI+
Sbjct: 32 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL- 87
Query: 65 LKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFH 123
L +L + ++ E +LYH + + F ++ Q QG+ ++H H
Sbjct: 88 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 147
Query: 124 RDLKPENLLVTNDV-LKIADFGLAREL---SSMPPYTEYVSTRWYRAPEVLLQSSS--YS 177
RDLK N+ + D+ +KI DFGLA E S + + + + APEV+ YS
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 178 PAIDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 208 FQSDVYAFGIVLYELMT 224
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 36/219 (16%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN---LREVKALRKLN- 58
R ++ L +G VY+A +V + A+K++ EE N ++EV ++KL+
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNRAIIQEVCFMKKLSG 84
Query: 59 HPNIIKL--------KEVVRENNELFFIFEYMEHNLYHIMR--ERQIPFSEGEIRSFMSQ 108
HPNI++ +E E + E + L ++ E + P S + Q
Sbjct: 85 HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQ 144
Query: 109 MLQGLAHMHRNG--YFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTEYVSTR--- 162
+ + HMHR HRDLK ENLL++N +K+ DFG A +S P Y+ R
Sbjct: 145 TCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALV 204
Query: 163 ----------WYRAPEVLLQSSSY--SPAIDMWAVGAIL 189
YR PE++ S++ D+WA+G IL
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 118/295 (40%), Gaps = 51/295 (17%)
Query: 5 KILEELGDGTCGCVYKA-FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKL-NHPN 61
K + +G+G G V KA + + A+K+MK + E++ L KL +HPN
Sbjct: 18 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 77
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQI---------------PFSEGEIRSF 105
II L L+ EY H NL +R+ ++ S ++ F
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYT-EYVSTRW 163
+ + +G+ ++ + + HRDL N+LV N V KIADFGL+R T + RW
Sbjct: 138 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 197
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAF 223
L S Y+ D+W+ G +L E+ +L C + A +
Sbjct: 198 MAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGT-----------PYCGMTCAELYEKL 244
Query: 224 PEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQAL 278
P+ + + P+N D E DL+ Q P RP+ Q L
Sbjct: 245 PQGYRLEK----------PLNCDD-------EVYDLMRQCWREKPYERPSFAQIL 282
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 118/295 (40%), Gaps = 51/295 (17%)
Query: 5 KILEELGDGTCGCVYKA-FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKL-NHPN 61
K + +G+G G V KA + + A+K+MK + E++ L KL +HPN
Sbjct: 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQI---------------PFSEGEIRSF 105
II L L+ EY H NL +R+ ++ S ++ F
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYT-EYVSTRW 163
+ + +G+ ++ + + HRDL N+LV N V KIADFGL+R T + RW
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 207
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAF 223
L S Y+ D+W+ G +L E+ +L C + A +
Sbjct: 208 MAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGT-----------PYCGMTCAELYEKL 254
Query: 224 PEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQAL 278
P+ + + P+N D E DL+ Q P RP+ Q L
Sbjct: 255 PQGYRLEK----------PLNCDD-------EVYDLMRQCWREKPYERPSFAQIL 292
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 8 EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIKLK 66
+ +G G+ G VYK + + VAVK + ++ + EV LRK H NI+ L
Sbjct: 19 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 74
Query: 67 EVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRD 125
+L + ++ E +LYH + + F ++ Q QG+ ++H HRD
Sbjct: 75 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 126 LKPENLLVTNDV-LKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSSS--YSPA 179
LK N+ + D+ +KI DFGLA S + + + + APEV+ YS
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 180 IDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 195 SDVYAFGIVLYELMT 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIK 64
+ + +G G+ G VYK + + VAVK + ++ + EV LRK H NI+
Sbjct: 17 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL- 72
Query: 65 LKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFH 123
L +L + ++ E +LYH + + F ++ Q QG+ ++H H
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 132
Query: 124 RDLKPENLLVTNDV-LKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSSS--YS 177
RDLK N+ + D+ +KI DFGLA S + + + + APEV+ YS
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 178 PAIDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 193 FQSDVYAFGIVLYELMT 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 8 EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIKLK 66
+ +G G+ G VYK + + VAVK + ++ + EV LRK H NI+ L
Sbjct: 16 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 71
Query: 67 EVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRD 125
+L + ++ E +LYH + + F ++ Q QG+ ++H HRD
Sbjct: 72 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 131
Query: 126 LKPENLLVTNDV-LKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSSS--YSPA 179
LK N+ + D+ +KI DFGLA S + + + + APEV+ YS
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 180 IDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 192 SDVYAFGIVLYELMT 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 8 EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIKLK 66
+ +G G+ G VYK + + VAVK + ++ + EV LRK H NI+ L
Sbjct: 14 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 69
Query: 67 EVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRD 125
+L + ++ E +LYH + + F ++ Q QG+ ++H HRD
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 126 LKPENLLVTNDV-LKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSSS--YSPA 179
LK N+ + D+ +KI DFGLA S + + + + APEV+ YS
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 180 IDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 190 SDVYAFGIVLYELMT 204
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 8 EELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIKLK 66
+ +G G+ G VYK + + VAVK + ++ + EV LRK H NI+ L
Sbjct: 14 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LF 69
Query: 67 EVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRD 125
+L + ++ E +LYH + + F ++ Q QG+ ++H HRD
Sbjct: 70 MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 126 LKPENLLVTNDV-LKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSSS--YSPA 179
LK N+ + D+ +KI DFGLA S + + + + APEV+ YS
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 180 IDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 190 SDVYAFGIVLYELMT 204
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 124/321 (38%), Gaps = 79/321 (24%)
Query: 1 MERYKILEE-LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKAL--RKL 57
++ YK+ + LG G G V + FN T E A+K + ++C R L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRAS 68
Query: 58 NHPNIIKLKEVVRE----NNELFFIFEYMEHN-LYHIMRER-QIPFSEGEIRSFMSQMLQ 111
P+I+++ +V L + E ++ L+ +++R F+E E M + +
Sbjct: 69 QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 112 GLAHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTEYVSTRWYRAP 167
+ ++H HRD+KPENLL T N +LK+ DFG A+E +
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT----------------- 171
Query: 168 EVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDS--EIDQLYKVCCILGA-----PDW 220
Y + DMW++G I+ L P F + I K +G P+W
Sbjct: 172 -----GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 226
Query: 221 TAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQH 280
+ E + LI L +P +R T + + H
Sbjct: 227 SEVSEEVKM-----------------------------LIRNLLKTEPTQRMTITEFMNH 257
Query: 281 PFFNVETWVPY-PLHDPLELR 300
P+ T VP PLH L+
Sbjct: 258 PWIMQSTKVPQTPLHTSRVLK 278
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIK 64
+ + +G G+ G VYK + + VAVK + ++ + EV LRK H NI+
Sbjct: 40 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL- 95
Query: 65 LKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFH 123
L +L + ++ E +LYH + + F ++ Q QG+ ++H H
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 155
Query: 124 RDLKPENLLVTNDV-LKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSSS--YS 177
RDLK N+ + D+ +KI DFGLA S + + + + APEV+ YS
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 178 PAIDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 216 FQSDVYAFGIVLYELMT 232
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 6 ILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIK 64
+ + +G G+ G VYK + + VAVK + ++ + EV LRK H NI+
Sbjct: 39 VGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL- 94
Query: 65 LKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFH 123
L +L + ++ E +LYH + + F ++ Q QG+ ++H H
Sbjct: 95 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIH 154
Query: 124 RDLKPENLLVTNDV-LKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSSS--YS 177
RDLK N+ + D+ +KI DFGLA S + + + + APEV+ YS
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 214
Query: 178 PAIDMWAVGAILAELFT 194
D++A G +L EL T
Sbjct: 215 FQSDVYAFGIVLYELMT 231
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 35/238 (14%)
Query: 8 EELGDGTCGCVYKA--FNVETYEIV---AVKKMKRKFYFWEECMNLREVKALRKLN-HPN 61
+ LG G G V +A F + + V AVK +K + E+ + E+K + L H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMR----------------------ERQIPFS 98
I+ L + I EY + +L + +R E P
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 99 EGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVTND-VLKIADFGLARELSSMPPYTE 157
++ F SQ+ QG+A + HRD+ N+L+TN V KI DFGLAR++ + Y
Sbjct: 157 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 216
Query: 158 YVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLS-PIFPGDSEIDQLYKV 211
+ R + APE + Y+ D+W+ G +L E+F+L +PG + YK+
Sbjct: 217 KGNARLPVKWMAPESIF-DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 273
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 31/226 (13%)
Query: 5 KILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
++LE G GCV+KA + Y V + ++ K + N EV +L + H NI++
Sbjct: 27 QLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK----QSWQNEYEVYSLPGMKHENILQ 82
Query: 65 L----KEVVRENNELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMH-- 117
K + +L+ I + E +L ++ + ++E + M +GLA++H
Sbjct: 83 FIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNE--LCHIAETMARGLAYLHED 140
Query: 118 ----RNGY----FHRDLKPENLLVTNDVLK-IADFGLARELSSMPPYTE---YVSTRWYR 165
++G+ HRD+K +N+L+ N++ IADFGLA + + + V TR Y
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 166 APEVLLQSSSYSP----AIDMWAVGAILAELFTLSPIFPGDSEIDQ 207
APEVL + ++ IDM+A+G +L EL S D +D+
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWEL--ASRCTAADGPVDE 244
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 118/295 (40%), Gaps = 51/295 (17%)
Query: 5 KILEELGDGTCGCVYKA-FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKL-NHPN 61
K + +G+G G V KA + + A+K+MK + E++ L KL +HPN
Sbjct: 25 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 84
Query: 62 IIKLKEVVRENNELFFIFEYMEH-NLYHIMRERQI---------------PFSEGEIRSF 105
II L L+ EY H NL +R+ ++ S ++ F
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 106 MSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYT-EYVSTRW 163
+ + +G+ ++ + + HR+L N+LV N V KIADFGL+R T + RW
Sbjct: 145 AADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 204
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAF 223
L S Y+ D+W+ G +L E+ +L C + A +
Sbjct: 205 MAIES--LNYSVYTTNSDVWSYGVLLWEIVSLGGT-----------PYCGMTCAELYEKL 251
Query: 224 PEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQAL 278
P+ + + P+N D E DL+ Q P RP+ Q L
Sbjct: 252 PQGYRLEK----------PLNCDD-------EVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 129/297 (43%), Gaps = 44/297 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKA-LRKLNHP 60
E K L E+G G G V K + + +I+AVK+++ E+ L ++ +R + P
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 61 NIIKLKEVVRENNELFFIFEYMEHN-------LYHIMRERQIPFSEGEIRSFMSQMLQGL 113
I++ + + + E M + +Y ++ + IP E + ++ L
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDD-VIP--EEILGKITLATVKAL 138
Query: 114 AHMHRN-GYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVSTRWYRAPEVLL 171
H+ N HRD+KP N+L+ +K+ DFG++ +L T R Y APE +
Sbjct: 139 NHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERID 198
Query: 172 QSSS---YSPAIDMWAVGAILAELFTLSPIFPG-DSEIDQLYKVCCILGAPDWTAFPEAT 227
S+S Y D+W++G L EL T +P +S DQL +V + G P P+ +
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV--VKGDP-----PQLS 251
Query: 228 NI-SRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
N R S S+ I+ + + D +RP + L+HPF
Sbjct: 252 NSEEREFSPSF-------------------INFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 30 VAVKKM-KRKFYFWEECMNLR----EVKALRKLNH--PNIIKLKEVVRENNELFFIFEYM 82
VA+K + K + W E N EV L+K++ +I+L + + I E
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 83 E--HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLV--TNDVL 138
E +L+ + ER E RSF Q+L+ + H H G HRD+K EN+L+ L
Sbjct: 139 EPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 197
Query: 139 KIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPI 198
K+ DFG L YT++ TR Y PE + + + +W++G +L ++
Sbjct: 198 KLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
Query: 199 FPGDSEI 205
F D EI
Sbjct: 257 FEHDEEI 263
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 93/233 (39%), Gaps = 15/233 (6%)
Query: 9 ELGDGTCGCVYKAFNVET-YEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKL-- 65
E+G G+ VYK + ET E+ + RK E E + L+ L HPNI++
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 66 --KEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNG--Y 121
+ V+ + + E +R +RS+ Q+L+GL +H
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 122 FHRDLKPENLLVTN--DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVLLQSSSYSPA 179
HRDLK +N+ +T +KI D GLA L + T + APE Y +
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXY--EEKYDES 209
Query: 180 IDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAP---DWTAFPEATNI 229
+D++A G E T + Q+Y+ P D A PE I
Sbjct: 210 VDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 96 PFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPP 154
P + ++ S+ Q+ +G+ + HRDL N+L++ N+V+KI DFGLAR++ P
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPD 254
Query: 155 YTEYVSTRW---YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG 201
Y TR + APE + YS D+W+ G +L E+F+L SP +PG
Sbjct: 255 YVRKGDTRLPLKWMAPESIFD-KIYSTKSDVWSYGVLLWEIFSLGGSP-YPG 304
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 2 ERYKILEELGDGTCGCVYK-----------AFNVETYEIVAVKKMKRKFYFWEECMNLRE 50
ER ++ +G+G G V++ A ++T + ++ KF L+E
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--------LQE 66
Query: 51 VKALRKLNHPNIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQM 109
+R+ +HP+I+KL V+ E N ++ I E L ++ R+ + + Q+
Sbjct: 67 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 125
Query: 110 LQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTE---YVSTRWYR 165
LA++ + HRD+ N+LV +ND +K+ DFGL+R + Y + +W
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM- 184
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELF 193
APE + ++ A D+W G + E+
Sbjct: 185 APES-INFRRFTSASDVWMFGVCMWEIL 211
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 116/288 (40%), Gaps = 36/288 (12%)
Query: 7 LEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVK-ALRKLNHPNIIKL 65
+ ELG G G V K +V + +I AVK+++ E+ L ++ + R ++ P +
Sbjct: 39 IXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTF 98
Query: 66 KEVVRENNELFFIFEYMEHNL---YHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN-GY 121
+ +++ E + +L Y + ++ E + +++ L H+H
Sbjct: 99 YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 122 FHRDLKPENLLVTN-DVLKIADFGLARELSSMPPYTEYVSTRWYRAPEVL---LQSSSYS 177
HRD+KP N+L+ +K DFG++ L + Y APE + L YS
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYS 218
Query: 178 PAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEATNISRLISISY 237
D+W++G EL L FP DS ++ ++ P
Sbjct: 219 VKSDIWSLGITXIELAILR--FPYDSWGTPFQQLKQVVEEP------------------- 257
Query: 238 SEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFFNV 285
S LP + S E +D Q + RPT + QHPFF +
Sbjct: 258 SPQLPAD------KFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTL 299
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 2 ERYKILEELGDGTCGCVYK-----------AFNVETYEIVAVKKMKRKFYFWEECMNLRE 50
ER ++ +G+G G V++ A ++T + ++ KF L+E
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--------LQE 89
Query: 51 VKALRKLNHPNIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQM 109
+R+ +HP+I+KL V+ E N ++ I E L ++ R+ + + Q+
Sbjct: 90 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 148
Query: 110 LQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTE---YVSTRWYR 165
LA++ + HRD+ N+LV +ND +K+ DFGL+R + Y + +W
Sbjct: 149 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM- 207
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELF 193
APE + ++ A D+W G + E+
Sbjct: 208 APES-INFRRFTSASDVWMFGVCMWEIL 234
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 2 ERYKILEELGDGTCGCVYK-----------AFNVETYEIVAVKKMKRKFYFWEECMNLRE 50
ER ++ +G+G G V++ A ++T + ++ KF L+E
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--------LQE 58
Query: 51 VKALRKLNHPNIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQM 109
+R+ +HP+I+KL V+ E N ++ I E L ++ R+ + + Q+
Sbjct: 59 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 117
Query: 110 LQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTE---YVSTRWYR 165
LA++ + HRD+ N+LV +ND +K+ DFGL+R + Y + +W
Sbjct: 118 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM- 176
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELF 193
APE + ++ A D+W G + E+
Sbjct: 177 APES-INFRRFTSASDVWMFGVCMWEIL 203
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 2 ERYKILEELGDGTCGCVYK-----------AFNVETYEIVAVKKMKRKFYFWEECMNLRE 50
ER ++ +G+G G V++ A ++T + ++ KF L+E
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF--------LQE 61
Query: 51 VKALRKLNHPNIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQM 109
+R+ +HP+I+KL V+ E N ++ I E L ++ R+ + + Q+
Sbjct: 62 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 110 LQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTE---YVSTRWYR 165
LA++ + HRD+ N+LV +ND +K+ DFGL+R + Y + +W
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM- 179
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELF 193
APE + ++ A D+W G + E+
Sbjct: 180 APES-INFRRFTSASDVWMFGVCMWEIL 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 2 ERYKILEELGDGTCGCVYK-----------AFNVETYEIVAVKKMKRKFYFWEECMNLRE 50
ER ++ +G+G G V++ A ++T + ++ KF L+E
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--------LQE 63
Query: 51 VKALRKLNHPNIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQM 109
+R+ +HP+I+KL V+ E N ++ I E L ++ R+ + + Q+
Sbjct: 64 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 122
Query: 110 LQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTE---YVSTRWYR 165
LA++ + HRD+ N+LV +ND +K+ DFGL+R + Y + +W
Sbjct: 123 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM- 181
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELF 193
APE + ++ A D+W G + E+
Sbjct: 182 APES-INFRRFTSASDVWMFGVCMWEIL 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 2 ERYKILEELGDGTCGCVYK-----------AFNVETYEIVAVKKMKRKFYFWEECMNLRE 50
ER ++ +G+G G V++ A ++T + ++ KF L+E
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--------LQE 61
Query: 51 VKALRKLNHPNIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQM 109
+R+ +HP+I+KL V+ E N ++ I E L ++ R+ + + Q+
Sbjct: 62 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 110 LQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTE---YVSTRWYR 165
LA++ + HRD+ N+LV +ND +K+ DFGL+R + Y + +W
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM- 179
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELF 193
APE + ++ A D+W G + E+
Sbjct: 180 APES-INFRRFTSASDVWMFGVCMWEIL 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 2 ERYKILEELGDGTCGCVYK-----------AFNVETYEIVAVKKMKRKFYFWEECMNLRE 50
ER ++ +G+G G V++ A ++T + ++ KF L+E
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--------LQE 64
Query: 51 VKALRKLNHPNIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQM 109
+R+ +HP+I+KL V+ E N ++ I E L ++ R+ + + Q+
Sbjct: 65 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 123
Query: 110 LQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTE---YVSTRWYR 165
LA++ + HRD+ N+LV +ND +K+ DFGL+R + Y + +W
Sbjct: 124 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM- 182
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELF 193
APE + ++ A D+W G + E+
Sbjct: 183 APES-INFRRFTSASDVWMFGVCMWEIL 209
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 2 ERYKILEELGDGTCGCVYK-----------AFNVETYEIVAVKKMKRKFYFWEECMNLRE 50
ER ++ +G+G G V++ A ++T + ++ KF L+E
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF--------LQE 61
Query: 51 VKALRKLNHPNIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQM 109
+R+ +HP+I+KL V+ E N ++ I E L ++ R+ + + Q+
Sbjct: 62 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 110 LQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLAREL---SSMPPYTEYVSTRWYR 165
LA++ + HRD+ N+LV +ND +K+ DFGL+R + + + +W
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM- 179
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELF 193
APE + ++ A D+W G + E+
Sbjct: 180 APES-INFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 2 ERYKILEELGDGTCGCVYK-----------AFNVETYEIVAVKKMKRKFYFWEECMNLRE 50
ER ++ +G+G G V++ A ++T + ++ KF L+E
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF--------LQE 441
Query: 51 VKALRKLNHPNIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQM 109
+R+ +HP+I+KL V+ E N ++ I E L ++ R+ + + Q+
Sbjct: 442 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 500
Query: 110 LQGLAHMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELSSMPPYTE---YVSTRWYR 165
LA++ + HRD+ N+LV +ND +K+ DFGL+R + Y + +W
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM- 559
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELF 193
APE + ++ A D+W G + E+
Sbjct: 560 APES-INFRRFTSASDVWMFGVCMWEIL 586
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 15/183 (8%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVV 69
LG G+ G V++ + +T AVKK++ + + EE M A L P I+ L V
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM------ACAGLTSPRIVPLYGAV 154
Query: 70 RENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPE 129
RE + E +E + + Q E ++ Q L+GL ++H H D+K +
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKAD 214
Query: 130 NLLVTNDVLKIA--DFGLA-----RELSSMPPYTEYV-STRWYRAPEVLLQSSSYSPAID 181
N+L+++D A DFG A L +Y+ T + APEV+L S +D
Sbjct: 215 NVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL-GRSCDAKVD 273
Query: 182 MWA 184
+W+
Sbjct: 274 VWS 276
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 135/305 (44%), Gaps = 49/305 (16%)
Query: 2 ERYKILEELGDGTCG--CVYKAFNVETYEIVAVKKMKRKFYFWE-----ECMNLREVK-A 53
E ++IL+ +G G G V K N + ++ A+K + + WE E RE +
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNAD--KVFAMKILNK----WEMLKRAETACFREERDV 127
Query: 54 LRKLNHPNIIKLKEVVRENNELFFIFEY-MEHNLYHIMRERQIPFSEGEIRSFMSQMLQG 112
L + I L +++N L+ + +Y + +L ++ + + E R ++++M+
Sbjct: 128 LVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIA 187
Query: 113 LAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLAREL--SSMPPYTEYVSTRWYRAPEV 169
+ +H+ Y HRD+KP+N+L+ N +++ADFG +L + V T Y +PE+
Sbjct: 188 IDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEI 247
Query: 170 LLQ----SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPE 225
L Y P D W++G + E+ F +S ++ K I+ + F
Sbjct: 248 LQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK---IMNHKERFQF-- 302
Query: 226 ATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQL-CSWD-PLRRPTADQALQHPFF 283
P ++D+ NA DLI +L CS + L + + +HPFF
Sbjct: 303 ----------------PTQVTDVSENAK----DLIRRLICSREHRLGQNGIEDFKKHPFF 342
Query: 284 NVETW 288
+ W
Sbjct: 343 SGIDW 347
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 9 ELGDGTCGCVYKA-FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLK 66
ELG G G V + + + +I VA+K +K+ + +RE + + +L++P I++L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 67 EVVRENNELFFIFEYMEHNLYH---IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFH 123
V + L + E H + + +IP S + + Q+ G+ ++ + H
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSN--VAELLHQVSMGMKYLEEKNFVH 133
Query: 124 RDLKPEN-LLVTNDVLKIADFGLARELSSMPPYTEYVST-----RWYRAPEVLLQSSSYS 177
RDL N LLV KI+DFGL++ L + Y S +WY APE + +S
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY-APEC-INFRKFS 191
Query: 178 PAIDMWAVGAILAELFT 194
D+W+ G + E +
Sbjct: 192 SRSDVWSYGVTMWEALS 208
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLKEVV 69
LG G+ G V++ + +T AVKK++ + + EE M A L P I+ L V
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM------ACAGLTSPRIVPLYGAV 135
Query: 70 RENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDLKPE 129
RE + E +E + + Q E ++ Q L+GL ++H H D+K +
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKAD 195
Query: 130 NLLVTNDVLKIA--DF---------GLARELSSMPPYTEYV-STRWYRAPEVLLQSSSYS 177
N+L+++D A DF GL ++L + +Y+ T + APEV+L S
Sbjct: 196 NVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT----GDYIPGTETHMAPEVVL-GRSCD 250
Query: 178 PAIDMWA 184
+D+W+
Sbjct: 251 AKVDVWS 257
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
Query: 9 ELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLR-EVKALRKLNHPNIIKLKE 67
+G G+ G VYK + + VAVK +K E+ R EV LRK H NI+
Sbjct: 43 RIGSGSFGTVYKG---KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 68 VVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFHRDL 126
+ ++N L + ++ E +LY + ++ F ++ Q QG+ ++H HRD+
Sbjct: 100 YMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM 158
Query: 127 KPENLLVTNDV-LKIADFGLA---RELSSMPPYTEYVSTRWYRAPEVLLQSSS--YSPAI 180
K N+ + + +KI DFGLA S + + + APEV+ + +S
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 181 DMWAVGAILAELFT 194
D+++ G +L EL T
Sbjct: 219 DVYSYGIVLYELMT 232
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 2 ERYKILEELGDGTCGCVYK-----------AFNVETYEIVAVKKMKRKFYFWEECMNLRE 50
ER ++ +G+G G V++ A ++T + ++ KF L+E
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF--------LQE 61
Query: 51 VKALRKLNHPNIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQM 109
+R+ +HP+I+KL V+ E N ++ I E L ++ R+ + + Q+
Sbjct: 62 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 110 LQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE---YVSTRWYR 165
LA++ + HRD+ N+LV+ D +K+ DFGL+R + Y + +W
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM- 179
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELF 193
APE + ++ A D+W G + E+
Sbjct: 180 APES-INFRRFTSASDVWMFGVCMWEIL 206
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 108 QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARE----------LSSMPPYT 156
Q+ + + +H G HRDLKP N+ T +DV+K+ DFGL L+ MP Y
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 157 EY---VSTRWYRAPEVLLQSSSYSPAIDMWAVGAILAELF 193
+ V T+ Y +PE + ++YS +D++++G IL EL
Sbjct: 232 THXGQVGTKLYMSPE-QIHGNNYSHKVDIFSLGLILFELL 270
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 10 LGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
+G G G V++A N A+K+++ +REVKAL KL HP I++
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVR 68
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 9 ELGDGTCGCVYKA-FNVETYEI-VAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIKLK 66
ELG G G V + + + +I VA+K +K+ + +RE + + +L++P I++L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 67 EVVRENNELFFIFEYMEHNLYH---IMRERQIPFSEGEIRSFMSQMLQGLAHMHRNGYFH 123
V + L + E H + + +IP S + + Q+ G+ ++ + H
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSN--VAELLHQVSMGMKYLEEKNFVH 459
Query: 124 RDLKPEN-LLVTNDVLKIADFGLARELSSMPPYTEYVST-----RWYRAPEVLLQSSSYS 177
R+L N LLV KI+DFGL++ L + Y S +WY APE + +S
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY-APEC-INFRKFS 517
Query: 178 PAIDMWAVGAILAELFT 194
D+W+ G + E +
Sbjct: 518 SRSDVWSYGVTMWEALS 534
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 108 QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW--- 163
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P Y R
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 258
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG---DSEIDQLYKVCCILGAPD 219
+ APE + Y+ D+W+ G +L E+F+L +PG D E + K + APD
Sbjct: 259 WMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 317
Query: 220 WTA 222
+T
Sbjct: 318 YTT 320
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 108 QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW--- 163
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P Y R
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTL--SPIFPG---DSEIDQLYKVCCILGAP 218
+ APE + Y+ D+W+ G +L E+F+L SP +PG D E + K + AP
Sbjct: 261 WMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVKIDEEFCRRLKEGTRMRAP 318
Query: 219 DWTA 222
D+T
Sbjct: 319 DYTT 322
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 108 QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW--- 163
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P Y R
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 265
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG---DSEIDQLYKVCCILGAPD 219
+ APE + Y+ D+W+ G +L E+F+L +PG D E + K + APD
Sbjct: 266 WMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 324
Query: 220 WTA 222
+T
Sbjct: 325 YTT 327
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 108 QMLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTEYVSTRW--- 163
Q+ +G+ + HRDL N+L++ +V+KI DFGLAR++ P Y R
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 267
Query: 164 YRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPI-FPG---DSEIDQLYKVCCILGAPD 219
+ APE + Y+ D+W+ G +L E+F+L +PG D E + K + APD
Sbjct: 268 WMAPETIF-DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 326
Query: 220 WTA 222
+T
Sbjct: 327 YTT 329
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + + +E L E + K NH
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQ 108
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 227
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 228 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 257
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 127/303 (41%), Gaps = 47/303 (15%)
Query: 4 YKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE-----ECMNLREVK-ALRKL 57
++IL+ +G G V +T ++ A+K M + W+ E RE + L
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNK----WDMLKRGEVSCFREERDVLVNG 118
Query: 58 NHPNIIKLKEVVRENNELFFIFEY-MEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLAHM 116
+ I +L ++ N L+ + EY + +L ++ + R ++++++ + +
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 117 HRNGYFHRDLKPENLLVTN-DVLKIADFGLARELSSMPPYTEYVS--TRWYRAPEVL--- 170
HR GY HRD+KP+N+L+ +++ADFG +L + V+ T Y +PE+L
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV 238
Query: 171 ---LQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
+ SY P D WA+G E+F F DS + K+
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI---------------- 282
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQ-LCSWDP-LRRPTADQALQHPFFNV 285
+ Y E L + L D EA D I + LC + L R A HPFF
Sbjct: 283 -------VHYKEHLSLPLVD--EGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFG 333
Query: 286 ETW 288
W
Sbjct: 334 LDW 336
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + KLNH
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQ 108
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 227
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 228 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 257
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + KLNH
Sbjct: 35 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQ 94
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 213
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 214 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 243
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 2 ERYKILEELGDGTCGCVYK-----------AFNVETYEIVAVKKMKRKFYFWEECMNLRE 50
ER ++ +G+G G V++ A ++T + ++ KF L+E
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF--------LQE 441
Query: 51 VKALRKLNHPNIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMSQM 109
+R+ +HP+I+KL V+ E N ++ I E L ++ R+ + + Q+
Sbjct: 442 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 500
Query: 110 LQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELSSMPPYTE---YVSTRWYR 165
LA++ + HRD+ N+LV+ D +K+ DFGL+R + Y + +W
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM- 559
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELF 193
APE + ++ A D+W G + E+
Sbjct: 560 APES-INFRRFTSASDVWMFGVCMWEIL 586
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 45/303 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE-----ECMNLREVK-ALR 55
E ++I++ +G G G V T I A+K + + WE E RE + L
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK----WEMLKRAETACFREERDVLV 129
Query: 56 KLNHPNIIKLKEVVRENNELFFIFEY-MEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
+ I L ++ N L+ + +Y + +L ++ + + E R ++ +M+ +
Sbjct: 130 NGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAID 189
Query: 115 HMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS--SMPPYTEYVSTRWYRAPEVLL 171
+H+ Y HRD+KP+N+L+ N +++ADFG +++ + V T Y +PE+L
Sbjct: 190 SIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQ 249
Query: 172 Q----SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
Y P D W++G + E+ F +S ++ K I+ + FP
Sbjct: 250 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK---IMNHEERFQFPSH- 305
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQL-CSWD-PLRRPTADQALQHPFFNV 285
+ + S EA DLI +L CS + L + + +H FF
Sbjct: 306 ---------------------VTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 344
Query: 286 ETW 288
W
Sbjct: 345 LNW 347
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 45/303 (14%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWE-----ECMNLREVK-ALR 55
E ++I++ +G G G V T I A+K + + WE E RE + L
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK----WEMLKRAETACFREERDVLV 145
Query: 56 KLNHPNIIKLKEVVRENNELFFIFEY-MEHNLYHIMRERQIPFSEGEIRSFMSQMLQGLA 114
+ I L ++ N L+ + +Y + +L ++ + + E R ++ +M+ +
Sbjct: 146 NGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAID 205
Query: 115 HMHRNGYFHRDLKPENLLV-TNDVLKIADFGLARELS--SMPPYTEYVSTRWYRAPEVLL 171
+H+ Y HRD+KP+N+L+ N +++ADFG +++ + V T Y +PE+L
Sbjct: 206 SIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQ 265
Query: 172 Q----SSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPEAT 227
Y P D W++G + E+ F +S ++ K I+ + FP
Sbjct: 266 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK---IMNHEERFQFPSH- 321
Query: 228 NISRLISISYSEILPINLSDIIPNASMEAIDLIWQL-CSWD-PLRRPTADQALQHPFFNV 285
+ + S EA DLI +L CS + L + + +H FF
Sbjct: 322 ---------------------VTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 360
Query: 286 ETW 288
W
Sbjct: 361 LNW 363
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 151/361 (41%), Gaps = 81/361 (22%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKL--NH 59
RY ++ +LG G V+ +++++ + VA+K +K ++ E ++ +R +K++R N
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 97
Query: 60 PN---IIKLKEVVR----ENNELFFIFEYMEHNLYH-IMRERQIPFSEGEIRSFMSQMLQ 111
PN +++L + + + +FE + H+L I++ ++ + Q+LQ
Sbjct: 98 PNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ 157
Query: 112 GLAHMH-RNGYFHRDLKPENLLVTND---VLKIADFGLARELSSMPP------------- 154
GL ++H + H D+KPEN+L++ + + ++A + S PP
Sbjct: 158 GLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATA 217
Query: 155 --------------------------------YTEYVSTRWYRAPEVLLQSSSYSPAIDM 182
+TE + TR YR+ EVL+ S +PA D+
Sbjct: 218 GNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA-DI 276
Query: 183 WAVGAILAELFTLSPIFPGDS------EIDQLYKVCCILGAPD-------------WTAF 223
W+ + EL T +F S + D + + +LG +T
Sbjct: 277 WSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKK 336
Query: 224 PEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ +I++L E+L + + + D + + P +R TA + L+HP+
Sbjct: 337 GDLKHITKLKPWGLFEVL-VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395
Query: 284 N 284
N
Sbjct: 396 N 396
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 151/361 (41%), Gaps = 81/361 (22%)
Query: 3 RYKILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMN-LREVKALRKL--NH 59
RY ++ +LG G V+ +++++ + VA+K +K ++ E ++ +R +K++R N
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 81
Query: 60 PN---IIKLKEVVR----ENNELFFIFEYMEHNLYH-IMRERQIPFSEGEIRSFMSQMLQ 111
PN +++L + + + +FE + H+L I++ ++ + Q+LQ
Sbjct: 82 PNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ 141
Query: 112 GLAHMH-RNGYFHRDLKPENLLVTND---VLKIADFGLARELSSMPP------------- 154
GL ++H + H D+KPEN+L++ + + ++A + S PP
Sbjct: 142 GLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATA 201
Query: 155 --------------------------------YTEYVSTRWYRAPEVLLQSSSYSPAIDM 182
+TE + TR YR+ EVL+ S +PA D+
Sbjct: 202 GNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA-DI 260
Query: 183 WAVGAILAELFTLSPIFPGDS------EIDQLYKVCCILGAPD-------------WTAF 223
W+ + EL T +F S + D + + +LG +T
Sbjct: 261 WSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKK 320
Query: 224 PEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPTADQALQHPFF 283
+ +I++L E+L + + + D + + P +R TA + L+HP+
Sbjct: 321 GDLKHITKLKPWGLFEVL-VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 379
Query: 284 N 284
N
Sbjct: 380 N 380
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + K NH
Sbjct: 26 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 85
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 146 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 204
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 205 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 234
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 54 LRKLNHPNIIKLKEVVRENNE-----LFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQ 108
L ++ HP+I+++ V + + + EY+ + +++P +E +++ +
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAI--AYLLE 190
Query: 109 MLQGLAHMHRNGYFHRDLKPENLLVTNDVLKIADFGLARELSSMPPYTEYVSTRWYRAPE 168
+L L+++H G + DLKPEN+++T + LK+ D G ++S + T ++APE
Sbjct: 191 ILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINS---FGYLYGTPGFQAPE 247
Query: 169 VLLQSSSYSPAIDMWAVGAILAEL 192
++ + A D++ VG LA L
Sbjct: 248 IVRTGPTV--ATDIYTVGRTLAAL 269
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + K NH
Sbjct: 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 212
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 213 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 242
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + K NH
Sbjct: 35 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 213
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 214 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 243
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + K NH
Sbjct: 51 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 110
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 171 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 229
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 230 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 259
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + K NH
Sbjct: 49 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 108
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 227
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 228 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + K NH
Sbjct: 41 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 100
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 161 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 219
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 220 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 249
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + K NH
Sbjct: 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 212
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 213 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 242
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + K NH
Sbjct: 52 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 111
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 172 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM- 230
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 231 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 260
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 53/294 (18%)
Query: 2 ERYKILEELGDGTCGCVYKAFNVE---TYEIVAVKKMKRKFYFWEECMN-LREVKALRKL 57
+++ + LG G G V +A + ++ VAVK +K + LRE +++
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 58 NHPNIIKLKEVV---RENNEL---FFIFEYMEHNLYHIM----RERQIPFS---EGEIRS 104
+HP++ KL V R L I +M+H H R + PF+ + +R
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR- 141
Query: 105 FMSQMLQGLAHMHRNGYFHRDLKPENLLVTNDV-LKIADFGLARELSSMPPYTEYVST-- 161
FM + G+ ++ + HRDL N ++ D+ + +ADFGL+R++ S Y + ++
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 162 --RWYRAPEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPD 219
+W L + Y+ D+WA G + E+ T E ++Y ++G
Sbjct: 202 PVKWLALES--LADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNY--LIGGNR 257
Query: 220 WTAFPEATNISRLISISYSEILPINLSDIIPNASMEAIDLIWQLCSWDPLRRPT 273
PE E DL++Q S DP +RP+
Sbjct: 258 LKQPPECME--------------------------EVYDLMYQCWSADPKQRPS 285
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + K NH
Sbjct: 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 134
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 195 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM- 253
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 254 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 283
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 49 REVKALRKLNHPNIIKLKEVVRENNELFFIFEYMEHNLYHIMRERQIPFSEGEIRSFMSQ 108
RE + +L P+++ + + + +L+ + RQ P + + + Q
Sbjct: 83 REARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQ 142
Query: 109 MLQGLAHMHRNGYFHRDLKPENLLVT-NDVLKIADFGLARELS--SMPPYTEYVSTRWYR 165
+ L H G HRD+KPEN+LV+ +D + DFG+A + + V T +Y
Sbjct: 143 IGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYX 202
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLSPIFPGDSEIDQLYKVCCILGAPDWTAFPE 225
APE +S + A D++A+ +L E T SP + GD + GA A P
Sbjct: 203 APERFSESHATYRA-DIYALTCVLYECLTGSPPYQGDQ--------LSVXGAHINQAIPR 253
Query: 226 ATNISRLISISYSEIL 241
+ + I +++ ++
Sbjct: 254 PSTVRPGIPVAFDAVI 269
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 6 ILEELGDGTCGCVYKAF-----NVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHP 60
++ LG G G VY+ N + VAVK + +E L E + K NH
Sbjct: 61 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 120
Query: 61 NIIKLKEVVRENNELFFIFEYME-HNLYHIMRERQIPFSEGEIRSFMS------QMLQGL 113
NI++ V ++ F + E M +L +RE + S+ + + + G
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 114 AHMHRNGYFHRDLKPENLLVT----NDVLKIADFGLARELSSMPPYTE----YVSTRWYR 165
++ N + HRD+ N L+T V KI DFG+AR++ Y + + +W
Sbjct: 181 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM- 239
Query: 166 APEVLLQSSSYSPAIDMWAVGAILAELFTLS 196
PE ++ ++ D W+ G +L E+F+L
Sbjct: 240 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLG 269
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 32/227 (14%)
Query: 5 KILEELGDGTCGCVYKAFNVETYEIVAVKKMKRKFYFWEECMNLREVKALRKLNHPNIIK 64
++LE G GCV+KA + + V + ++ K + E RE+ + + H N+++
Sbjct: 18 QLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSE----REIFSTPGMKHENLLQ 73
Query: 65 LKEVVRENN----ELFFIFEYMEH-NLYHIMRERQIPFSEGEIRSFMSQMLQGLAHMHRN 119
+ + EL+ I + + +L ++ I ++E + M +GL+++H +
Sbjct: 74 FIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNE--LCHVAETMSRGLSYLHED 131
Query: 120 -----------GYFHRDLKPENLLVTNDVLKI-ADFGLARELS-SMPPYTEY--VSTRWY 164
HRD K +N+L+ +D+ + ADFGLA PP + V TR Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 165 RAPEVLLQSSSYSP----AIDMWAVGAILAELFTLSPIFPGDSEIDQ 207
APEVL + ++ IDM+A+G +L EL +S D +D+
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL--VSRCKAADGPVDE 236
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,301,780
Number of Sequences: 62578
Number of extensions: 553497
Number of successful extensions: 4929
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 1150
Number of HSP's gapped (non-prelim): 1306
length of query: 432
length of database: 14,973,337
effective HSP length: 102
effective length of query: 330
effective length of database: 8,590,381
effective search space: 2834825730
effective search space used: 2834825730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)