BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014047
(431 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P37662|YHJX_ECOLI Inner membrane protein YhjX OS=Escherichia coli (strain K12)
GN=yhjX PE=1 SV=1
Length = 402
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 191 EGAVKEKRRPRRG---EDFKLGEAFVKADFWLLWFVYFLGVGAGVTVL---NNLAQIGVA 244
+ A K++ + G +D+ L E+ K +W+L ++ +G+ V+ ++AQ
Sbjct: 187 KDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDIAQSLAH 246
Query: 245 LGVNDTTELLCLFSLCNFAGRLGSGVLSEHYVRSKAIPRTVWITCTHIMMI--LTFLLYA 302
L V + + S+ N +GRL G+LS+ R + I T ++ + + LL+A
Sbjct: 247 LDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVI------TIGQVISLVGMAALLFA 300
Query: 303 SALSGTLYAATVLLGVCYGVIYSLMVPTASELFGLKHFGLIYNFILLGNPIGAL 356
+ T +AA + +G ++ SE FGL + Y I LG IG++
Sbjct: 301 PLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSI 354
>sp|Q6CGU8|MCH1_YARLI Probable transporter MCH1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=MCH1 PE=3 SV=1
Length = 486
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 27/207 (13%)
Query: 204 EDFKLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDT-----TELLCLFS 258
E L E F WL + G NN+ I + V + + + LF+
Sbjct: 261 EGATLKEFFTDKTAWLFLLCFVFIGGPFEMFQNNMGAILDTVTVENADSPSFSTHVSLFA 320
Query: 259 LCNFAGRLGSGVLSEHYVRSKAIPRTVWIT-------CTHIMM---ILTFLLYASALSGT 308
+ RL G SE + R V ++ C H+M+ I T A S
Sbjct: 321 TFSTVSRLVVGFSSE--AMESHVSRPVLLSVIALVAACIHLMVPSGIFTVFDNAKYFS-- 376
Query: 309 LYAATVLLGVCYGVIYSLMVPTASELFGLKHFGLIYNFILLGNPIGALLFSGLLAGKLYD 368
T++ G YG ++L+ ++++G+ + G I+ +L +G+L + GLL K+YD
Sbjct: 377 --VVTIVNGFSYGSSFTLVPTIVTKVWGIANLGTIWGSFILALAVGSLGY-GLLFAKVYD 433
Query: 369 AEATKQG----SSTCIGAECFRLTFLV 391
A A++ G S C G C+ LTF++
Sbjct: 434 A-ASEVGVGSMSQVCSGVHCYGLTFVI 459
>sp|Q07376|MCH1_YEAST Probable transporter MCH1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MCH1 PE=1 SV=1
Length = 486
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 250 TTELLCLFSLCNFAGRLGSGVLSEHYVRSKAIPRTVWITCTHIMM-----ILTFLLYASA 304
+T+LL ++L + RL +G++++ + + K + WI T + + + + +SA
Sbjct: 318 STKLLSTYALSSTFTRLLTGIVADFFAKKKISIK--WILLTFLSLGVCAQLFLLKMTSSA 375
Query: 305 LSGTLYAATVLLGVCYGVIYSLMVPTASELFGLKHFGLIYNFILLGNPIGALLFSGLLAG 364
L L+G+ YG ++++ ++G + FG +Y +L+ IG+++F +L
Sbjct: 376 SPWGLVPTGSLVGIVYGGLFTVYPTLVLLVWGERSFGTVYGSLLIAPAIGSMIFC-MLYA 434
Query: 365 KLYDAEATKQG----SSTCIGA 382
K YD+ G + +CI A
Sbjct: 435 KFYDSRCMSGGGDLRNPSCISA 456
>sp|Q9P3K8|MCH1_NEUCR Probable transporter MCH1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mch-1
PE=3 SV=1
Length = 598
Score = 39.7 bits (91), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 309 LYAATVLLGVCYGVIYSLMVPTASELFGLKHF----GLIYNFILLGNPIGALLFSGLLAG 364
+ A+ L+G YG ++SL + ++G+++F G++ F LG L++S +
Sbjct: 480 FWVASGLVGAGYGAVFSLTPIIITVIWGVENFATNWGIVAMFPALGATFWGLVYSAVYQS 539
Query: 365 KLYDAEATKQGSST---CIGAECFRLTFLVLAG----VCGL 398
+ A + QG C G+EC+ F +A CGL
Sbjct: 540 GVEKAASNGQGGEEDQFCYGSECYASAFWAMAASVWVACGL 580
>sp|Q08777|MCH5_YEAST Riboflavin transporter MCH5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MCH5 PE=1 SV=2
Length = 521
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 244 ALGVNDTTELLCLFSLCNFAGRLGSGVLSEHYVRSKAIPRTVWITCTHIMMILTFLLYAS 303
+ ND L+ + ++C GR G LS+ + R T + I+M + +L + +
Sbjct: 361 GISANDAYTLIMIINVCGIPGRWVPGYLSDKFGRFNVAIAT--LLTLFIVMFVGWLPFGT 418
Query: 304 ALSGTLYAATVLLGVCYGVIYSLMVPTASELFGLKHFGLIYN 345
L+ +Y + L G C G ++SL+ ++ + FG Y+
Sbjct: 419 NLT-NMYVISALYGFCSGSVFSLLPVCCGQISKTEEFGKRYS 459
>sp|Q5AXV1|MCH1_EMENI Probable transporter mch1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mch1 PE=3
SV=2
Length = 615
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 313 TVLLGVCYGVIYSLMVPTASELFGLKHFGLIYNFILLGNPIGALLFSGLLAGKLYD--AE 370
T L+G+ YG I+SL+ S ++G+++FG + + + GA ++ G++ + Y A+
Sbjct: 510 TALVGLGYGSIFSLVPIIISVVWGVENFGTNWGIVAMFPAAGAAMW-GVIYSRAYQSAAD 568
Query: 371 ATKQGSSTCIGAECF 385
+ C G +CF
Sbjct: 569 GSPTDDGQCHGWKCF 583
>sp|Q03795|YM30_YEAST Uncharacterized membrane protein YMR155W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR155W PE=1
SV=1
Length = 547
Score = 35.8 bits (81), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 155/418 (37%), Gaps = 68/418 (16%)
Query: 3 NFPLSRGTVSGILKGYAGIAAAIYTVLYNMVLQNSATTLLLFLALGIPLICLVTTYFIRA 62
NFP RGT G++ +++ L + + + + +FL + + LV + +
Sbjct: 139 NFPQHRGTAGAFPVSLYGLSGMVFSYLCSKLFGENIEHVFIFLMVACGCMILVGYFSLDI 198
Query: 63 CTPASGEDSS--EHGHFVFTQAASVFLAIYVVAISITSDYVSLSDALSYILVAIMVVFML 120
+ A G+D+S E + + +Y + V S +Y A+ F
Sbjct: 199 FSNAEGDDASIKEWELQKSRETDDNIVPLYENSNDYIGSPVRSSSPATYETYALSDNFQ- 257
Query: 121 SPLAIPVKMTLFPATKKRIRSAGSSDSLAQEGGDSTQTDPLLTPSSSAAYLGSFYETEDF 180
+ + F A + R S PLL+PSS Y+ ED
Sbjct: 258 -------ETSEFFALEDRQLS----------------NRPLLSPSSPHTK----YDFEDE 290
Query: 181 SDVEILLAIGEGAVKEKRRPRRGEDFKLGEAFVKADFWL-------LWFVYFLG--VGAG 231
+ + +GE + ++ R + K F+ L L ++Y +G V A
Sbjct: 291 NTSKN--TVGENSAQKSMRLHVFQSLK-SSTFIGYYIVLGILQGVGLMYIYSVGFMVQAQ 347
Query: 232 VTV--LNNLAQIGVALGVNDTTELLCLFSLCNFAGRLGSGVLSEHYVRSKAIPRTVWITC 289
V+ LN L + T L SL +F GRL SG +S+ V+ K + +W
Sbjct: 348 VSTPPLNQLPINAEKIQSLQVT----LLSLLSFCGRLSSGPISDFLVK-KFKAQRLWNIV 402
Query: 290 THIMMILTFL----------------LYASALSGTLYAATVLLGVCYGVIYSLMVPTASE 333
I +L FL L AS + + + G +GV++ ++
Sbjct: 403 --IASLLVFLASNKISHDFSSIEDPSLRASKSFKNISVCSAIFGYSFGVLFGTFPSIVAD 460
Query: 334 LFGLKHFGLIYNFILLGNPIGALLFSGLLAGKLYDAEATKQGSSTCIGAECFRLTFLV 391
FG + ++ + G +F+ +L G+ + A + G C+ TF+V
Sbjct: 461 RFGTNGYSTLWGVLTTGGVFSVSVFTDIL-GRDFKANTGDDDGNCKKGVLCYSYTFMV 517
>sp|Q6FWD4|MCH1_CANGA Probable transporter MCH1 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=MCH1 PE=3
SV=1
Length = 489
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 83/173 (47%), Gaps = 17/173 (9%)
Query: 250 TTELLCLFSLCNFAGRLGSGVLSEHYVRSKAIPRTVWITCTHIMMILT-----FLLYASA 304
++ LL +++L + RLG+G+ +++ + + + WI +++ L ++L S+
Sbjct: 317 SSALLSIYALTSTLTRLGTGLTVDYFNKRQLSVK--WILLLFLVVGLVTQGKIYMLSMSS 374
Query: 305 LSGT--------LYAATVLLGVCYGVIYSLMVPTASELFGLKHFGLIYNFILLGNPIGAL 356
L + L+ ++ G+ YG ++++ ++G K FG Y +++ +G+
Sbjct: 375 LDHSHMVTINRKLFYIGIMQGIAYGGLFTIYPTITLMVWGEKMFGTAYGTLMIAPALGSA 434
Query: 357 LFSGLLAGKLYDAEATKQGSSTCIGAECFRLTFLVLAGVCGLGTILSIILTIR 409
L S L+ +YD+E + +CI A + T L L +++++ R
Sbjct: 435 L-SCLIYADVYDSECANSTTRSCI-APVYETTALEFCAAILLTVVVTVLWRKR 485
>sp|B9K2V4|DCTA_AGRVS C4-dicarboxylate transport protein OS=Agrobacterium vitis (strain
S4 / ATCC BAA-846) GN=dctA PE=3 SV=1
Length = 444
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 184 EILLAIGEGAVKEKRRPRRGEDFK-LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIG 242
++++AI G + P+ GE K LG+AF+K ++ V FL V G+ +++L ++G
Sbjct: 23 QVIVAIIGGILLGHFYPQTGEALKPLGDAFIKLVKMVIAPVIFLTVATGIAGMSDLKKVG 82
Query: 243 VALGVNDTTELLCLFSLCNFAGRLGSGVLS 272
G LC +L G L S +L
Sbjct: 83 RVAG-KAMIYFLCFSTLALVVGMLVSNILQ 111
>sp|Q96TW9|MCH1_HANAN Probable transporter MCH1 OS=Hansenula anomala GN=MCH1 PE=3 SV=1
Length = 489
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 218 WLLWFVYFLGVGAGVTVLNNLAQIGVALGVND-TTELLCLFSLCNFAGRLGSGVLSEHYV 276
++L F L +G + N+ + A+ N ++ + + ++ + RL G LS+ V
Sbjct: 265 YVLLFSLLLSIGPSEMYITNMGSLVKAITPNSLISDQVAIHAVFSTLSRLSLGALSDFLV 324
Query: 277 RSKAIPRTVWITCTHIMM---ILTFLLYASALSGTLYAATVLLGVCYGVIYSLMVPTASE 333
+ I R+ W+ + I++ F+ ++ + Y + L G YG +++L
Sbjct: 325 TNYQISRS-WLLLSIIVLGFFTQIFIATSTFVKDQYYIISALSGFSYGGLFTLYPTVIFS 383
Query: 334 LFGLKHFGLIYNFILLGNPIGALLFSGLLAGKLYDAEATKQGSSTCIGAECFRLTFL 390
++G + FG + ++ IG+ F G++ G +YD+ ST C L FL
Sbjct: 384 IWGPEIFGSAWGSFMIAPAIGSTTF-GMVFGLVYDSACGVFAEST--TGNCVSLVFL 437
>sp|Q986R8|DCTA2_RHILO C4-dicarboxylate transport protein 2 OS=Rhizobium loti (strain
MAFF303099) GN=dctA2 PE=3 SV=1
Length = 442
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 183 VEILLAIGEGAVKEKRRPRRGEDFK-LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI 241
V++L+AI G + P GE K LG+AF+K ++ V FL V G+ +++L ++
Sbjct: 23 VQVLVAITVGILLGHYYPSIGESMKPLGDAFIKLVKMIIAPVIFLTVATGIAGMSDLQKV 82
Query: 242 G 242
G
Sbjct: 83 G 83
>sp|Q4IM48|MCH1_GIBZE Probable transporter MCH1 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=MCH1 PE=3 SV=1
Length = 572
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 45/214 (21%)
Query: 218 WLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDTTEL------------LCLFSLCNFAGR 265
W + L VG G +NNL G +G E+ + +F + N A R
Sbjct: 331 WPFALAFLLIVGPGEAFINNL---GTIIGTLTPPEMEGWSHRTSAATHVSIFGITNTASR 387
Query: 266 LGSGVLSE--------HYVRSKA----------IPRTVWITCTHIMMILTFLLYASAL-- 305
+ G L++ +V+ + I R ++ M+ + L+ AS L
Sbjct: 388 IFIGTLTDLLAPYPHTQHVQGPSTRSAVSSRFSISRVAFMAFFASMLSIGLLILASGLVQ 447
Query: 306 --SGTLYAATVLLGVCYGVIYSLMVPTASELFGLKHFGLIYNFILL----GNPIGALLFS 359
+ + + L+G YG I+SL + ++G+++F Y I + G+ L++S
Sbjct: 448 NHAERFWLVSGLVGAGYGAIFSLTPLMVTIIWGVENFATNYGLIGMLPAAGSTFWGLVYS 507
Query: 360 GLLAGKLYDAEATKQGSST----CIGAECFRLTF 389
++A +GS C G +C+ T+
Sbjct: 508 ATYQNGANKSKAGPEGSDRDDLFCYGEQCYAPTY 541
>sp|Q98AV2|DCTA1_RHILO C4-dicarboxylate transport protein 1 OS=Rhizobium loti (strain
MAFF303099) GN=dctA1 PE=3 SV=2
Length = 477
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 183 VEILLAIGEGAVKEKRRPRRGEDFK-LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI 241
V++L+AI G P+ GE+ K LG+AF+K ++ V FL V G+ +++L ++
Sbjct: 23 VQVLVAILLGVAVGHFYPQIGENLKPLGDAFIKLVKMIIAPVIFLTVSTGIAGMSDLQKV 82
Query: 242 G 242
G
Sbjct: 83 G 83
>sp|Q4WVT3|MCH1_ASPFU Probable transporter mch1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mch1 PE=3
SV=1
Length = 619
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 307 GTLYAATVLLGVCYGVIYSLMVPTASELFGLKHFGLIYNFILLGNPIGALLFSGLLAGKL 366
G + T L+G+ YG +SL+ S ++G+++FG + + + GA ++ + +
Sbjct: 507 GLSHVTTALIGLGYGSAFSLVPIIISVVWGVENFGTNWGIVAMVPAAGAAMWGVIYSRGY 566
Query: 367 YDAEATKQGS--STCIGAECFRLTFLVLAGVCGLGTILSIILTI 408
DA GS C G C+ G +G LS+ + +
Sbjct: 567 QDATDGGNGSPDGQCHGWRCY--------GFWAVGCTLSVWVAV 602
>sp|Q2KYU4|DCTA_BORA1 C4-dicarboxylate transport protein OS=Bordetella avium (strain
197N) GN=dctA PE=3 SV=1
Length = 445
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 183 VEILLAIGEGAVKEKRRPRRGEDFK-LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI 241
V++L+AI G + +P GE K LG+ F+K ++ V FL V G+ +++L ++
Sbjct: 23 VQVLVAIVIGVLLGYFKPDLGEAMKPLGDGFIKLVKMIIAPVIFLTVTTGIAAMSDLKKV 82
Query: 242 G 242
G
Sbjct: 83 G 83
>sp|Q01857|DCTA_RHILE C4-dicarboxylate transport protein OS=Rhizobium leguminosarum
GN=dctA PE=3 SV=1
Length = 444
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 183 VEILLAIGEGAVKEKRRPRRGEDFK-LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI 241
V++L+AI G + P G K LG+AF+K ++ V FL V G+ +++L ++
Sbjct: 24 VQVLVAIAAGILLGHFYPELGTQLKPLGDAFIKLVKMIIAPVIFLTVATGIAGMSDLQKV 83
Query: 242 G 242
G
Sbjct: 84 G 84
>sp|A6X4N2|DCTA_OCHA4 C4-dicarboxylate transport protein OS=Ochrobactrum anthropi (strain
ATCC 49188 / DSM 6882 / NCTC 12168) GN=dctA PE=3 SV=1
Length = 444
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 183 VEILLAIGEGAVKEKRRPRRGEDFK-LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI 241
V++L+AI G + P G K LG+AF+K ++ V FL V G+ + ++ ++
Sbjct: 24 VQVLVAIAAGILLGHFYPELGTQLKPLGDAFIKLVKMIIAPVIFLTVATGIAGMTDMKKV 83
Query: 242 G 242
G
Sbjct: 84 G 84
>sp|P20672|DCTA_RHIME C4-dicarboxylate transport protein OS=Rhizobium meliloti (strain
1021) GN=dctA PE=1 SV=1
Length = 441
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 183 VEILLAIGEGAVKEKRRPRRGEDFK-LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI 241
V++L AI G + P G + K LG+AF++ ++ V FL V G+ + +LA++
Sbjct: 21 VQVLAAIAAGILLGHFYPDIGTELKPLGDAFIRLVKMIIAPVIFLTVATGIAGMTDLAKV 80
Query: 242 G 242
G
Sbjct: 81 G 81
>sp|Q51330|OXLT_OXAFO Oxalate:formate antiporter OS=Oxalobacter formigenes GN=oxlT PE=1
SV=3
Length = 418
Score = 32.3 bits (72), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Query: 204 EDFKLGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQIGVALGVNDT--TELLCLFSLCN 261
+DF GE FW+LW +F G+ ++ N G +LG+ T + + +L N
Sbjct: 209 KDFNSGEMLRTPQFWVLWTAFFSVNFGGLLLVANSVPYGRSLGLAAGVLTIGVSIQNLFN 268
Query: 262 FAGRLGSGVLSEHYVRSKAIPRTVWITCTHIMMILTFLLYASALSGTLYAATVLLG-VCY 320
R G +S+ R K + I + + T +AL + A + + +
Sbjct: 269 GGCRPFWGFVSDKIGRYKTMSVVFGINAVVLALFPTI----AALGDVAFIAMLAIAFFTW 324
Query: 321 GVIYSLMVPTASELFGLKHFGLIYNFILLGNPIGALLFSGLLAGKLYDAEATKQGSSTCI 380
G Y+L T S++FG + Y F ++ GL A A AT G +T
Sbjct: 325 GGSYALFPSTNSDIFGTAYSARNYGFFWAAKATASIFGGGLGA-----AIATNFGWNTA- 378
Query: 381 GAECFRLTFLVLAGVCGLGTILSIILTIRI-RPVYQML 417
FL+ A + L+ + R+ RPV +M+
Sbjct: 379 --------FLITAITSFIAFALATFVIPRMGRPVKKMV 408
>sp|B5ZXG4|DCTA_RHILW C4-dicarboxylate transport protein OS=Rhizobium leguminosarum bv.
trifolii (strain WSM2304) GN=dctA PE=3 SV=1
Length = 443
Score = 32.0 bits (71), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 183 VEILLAIGEGAVKEKRRPRRGEDFK-LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI 241
V++L AI G + P G K LG+AF+K ++ V FL V G+ +++L ++
Sbjct: 24 VQVLAAIAAGILLGHFYPELGAQLKPLGDAFIKLVKMIIAPVIFLTVATGIAGMSDLKKV 83
Query: 242 G 242
G
Sbjct: 84 G 84
>sp|Q8XR66|DCTA3_RALSO C4-dicarboxylate transport protein 3 OS=Ralstonia solanacearum
(strain GMI1000) GN=dctA3 PE=3 SV=1
Length = 447
Score = 32.0 bits (71), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 183 VEILLAIGEGAVKEKRRPRRGEDFK-LGEAFVKADFWLLWFVYFLGVGAGVTVLNNLAQI 241
V++L+ + G V+ P G D K LG+ F+K + + F V G+ + N+ ++
Sbjct: 11 VQVLIGVAAGIVQGVAAPNLGSDLKPLGDVFIKLIKMVFAPIIFATVTLGIARMENMKEL 70
Query: 242 GVALGVNDTT--ELLCLFSLC 260
G +GV E+L F+L
Sbjct: 71 G-RVGVRALVYFEVLSTFALA 90
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.140 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,630,582
Number of Sequences: 539616
Number of extensions: 5987656
Number of successful extensions: 18651
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 18629
Number of HSP's gapped (non-prelim): 77
length of query: 431
length of database: 191,569,459
effective HSP length: 120
effective length of query: 311
effective length of database: 126,815,539
effective search space: 39439632629
effective search space used: 39439632629
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)