Query 014048
Match_columns 431
No_of_seqs 235 out of 801
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 01:21:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014048.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014048hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 2.4E-62 5.1E-67 511.0 20.8 359 51-416 70-461 (464)
2 PF03016 Exostosin: Exostosin 100.0 2.5E-56 5.4E-61 440.2 22.3 294 50-368 1-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 100.0 1.7E-28 3.8E-33 248.5 18.4 309 70-411 175-527 (907)
4 KOG1022 Acetylglucosaminyltran 99.6 1.7E-14 3.6E-19 147.1 12.4 238 118-384 134-386 (691)
5 PF00852 Glyco_transf_10: Glyc 96.6 0.0038 8.2E-08 63.6 6.6 140 217-368 142-295 (349)
6 cd03814 GT1_like_2 This family 96.0 0.047 1E-06 53.5 10.2 96 290-390 257-353 (364)
7 cd03801 GT1_YqgM_like This fam 95.9 0.047 1E-06 52.7 9.3 94 291-390 267-363 (374)
8 PF00534 Glycos_transf_1: Glyc 95.7 0.022 4.7E-07 50.8 5.8 86 290-381 83-170 (172)
9 cd03820 GT1_amsD_like This fam 95.5 0.13 2.9E-06 49.4 11.0 95 291-390 244-340 (348)
10 cd03822 GT1_ecORF704_like This 95.2 0.11 2.4E-06 51.0 9.4 93 291-390 259-355 (366)
11 cd03794 GT1_wbuB_like This fam 94.9 0.13 2.8E-06 50.3 9.1 94 291-390 286-387 (394)
12 PLN02871 UDP-sulfoquinovose:DA 94.7 0.16 3.4E-06 53.5 9.4 95 291-390 323-421 (465)
13 cd03818 GT1_ExpC_like This fam 94.5 0.23 5.1E-06 50.7 10.1 118 264-390 266-388 (396)
14 cd03806 GT1_ALG11_like This fa 94.3 0.32 6.9E-06 50.6 10.7 135 247-390 273-414 (419)
15 cd03808 GT1_cap1E_like This fa 94.2 0.22 4.8E-06 48.0 8.7 91 292-388 256-349 (359)
16 cd03821 GT1_Bme6_like This fam 94.0 0.29 6.2E-06 47.7 9.1 93 291-390 273-367 (375)
17 TIGR03449 mycothiol_MshA UDP-N 94.0 0.36 7.8E-06 49.2 10.1 95 291-390 294-389 (405)
18 cd03823 GT1_ExpE7_like This fa 93.8 0.49 1.1E-05 46.0 10.4 89 291-384 254-344 (359)
19 cd03800 GT1_Sucrose_synthase T 93.5 0.18 3.9E-06 50.7 6.8 95 291-390 294-390 (398)
20 cd04962 GT1_like_5 This family 93.5 0.21 4.6E-06 49.8 7.2 94 292-390 263-358 (371)
21 cd03809 GT1_mtfB_like This fam 93.3 0.33 7.2E-06 47.5 8.2 92 291-390 264-357 (365)
22 cd05844 GT1_like_7 Glycosyltra 93.1 0.64 1.4E-05 46.2 10.1 94 291-390 256-358 (367)
23 cd03819 GT1_WavL_like This fam 93.0 0.28 6.1E-06 48.4 7.2 93 291-389 255-352 (355)
24 PRK09814 beta-1,6-galactofuran 92.9 0.1 2.2E-06 52.5 3.9 90 290-388 217-317 (333)
25 TIGR03088 stp2 sugar transfera 92.4 0.52 1.1E-05 47.4 8.4 93 292-390 265-360 (374)
26 cd03792 GT1_Trehalose_phosphor 91.2 1.5 3.1E-05 44.4 10.0 94 291-390 265-359 (372)
27 TIGR02149 glgA_Coryne glycogen 90.9 1.4 2.9E-05 44.4 9.5 98 290-390 271-374 (388)
28 cd03798 GT1_wlbH_like This fam 90.9 0.82 1.8E-05 44.2 7.6 94 291-390 270-364 (377)
29 PRK15427 colanic acid biosynth 90.7 1.9 4E-05 44.7 10.4 93 291-390 290-393 (406)
30 cd04951 GT1_WbdM_like This fam 90.1 1.5 3.3E-05 43.0 8.9 93 292-390 255-348 (360)
31 cd03805 GT1_ALG2_like This fam 90.0 1.8 3.9E-05 43.6 9.5 93 292-390 292-386 (392)
32 cd03804 GT1_wbaZ_like This fam 89.7 0.87 1.9E-05 45.4 6.9 62 290-355 252-313 (351)
33 cd03807 GT1_WbnK_like This fam 89.4 0.51 1.1E-05 45.8 4.8 92 292-390 261-354 (365)
34 PLN02949 transferase, transfer 89.3 2.7 5.8E-05 44.6 10.5 96 291-390 346-444 (463)
35 KOG2619 Fucosyltransferase [Ca 89.2 1.8 4E-05 44.4 8.7 146 217-371 163-319 (372)
36 cd04955 GT1_like_6 This family 89.2 2.3 5E-05 41.9 9.4 91 291-390 259-352 (363)
37 cd03817 GT1_UGDG_like This fam 89.2 3 6.5E-05 40.5 10.1 92 291-388 270-362 (374)
38 PRK10307 putative glycosyl tra 89.0 1.2 2.7E-05 45.6 7.5 95 290-390 294-395 (412)
39 PRK15484 lipopolysaccharide 1, 88.8 3.1 6.8E-05 42.5 10.3 94 291-390 268-365 (380)
40 cd03811 GT1_WabH_like This fam 88.2 3.5 7.7E-05 39.4 9.7 92 292-386 256-350 (353)
41 cd03795 GT1_like_4 This family 87.4 3.7 8.1E-05 40.2 9.6 95 291-389 255-353 (357)
42 PF13524 Glyco_trans_1_2: Glyc 86.9 0.93 2E-05 36.2 4.1 72 312-390 11-84 (92)
43 cd04949 GT1_gtfA_like This fam 86.5 0.79 1.7E-05 46.0 4.2 95 292-390 271-366 (372)
44 cd03816 GT1_ALG1_like This fam 85.6 3.8 8.3E-05 42.4 8.8 89 290-384 305-399 (415)
45 TIGR02095 glgA glycogen/starch 85.5 4.1 9E-05 42.8 9.2 95 292-390 358-460 (473)
46 TIGR03087 stp1 sugar transfera 85.2 2.3 5E-05 43.5 6.9 91 292-390 290-384 (397)
47 PRK09922 UDP-D-galactose:(gluc 83.8 3.7 7.9E-05 41.4 7.6 91 292-384 250-341 (359)
48 cd03802 GT1_AviGT4_like This f 83.6 1.9 4.1E-05 42.0 5.3 41 292-333 236-277 (335)
49 PRK00654 glgA glycogen synthas 83.2 7.1 0.00015 41.1 9.7 38 293-330 350-387 (466)
50 PRK14098 glycogen synthase; Pr 83.0 7.3 0.00016 41.5 9.8 40 292-331 374-413 (489)
51 cd03799 GT1_amsK_like This is 82.5 10 0.00022 37.0 10.1 95 291-390 247-349 (355)
52 cd03813 GT1_like_3 This family 81.7 3.4 7.4E-05 43.6 6.7 89 292-385 363-458 (475)
53 cd03825 GT1_wcfI_like This fam 79.9 4.6 0.0001 39.7 6.6 90 290-384 255-345 (365)
54 TIGR02472 sucr_P_syn_N sucrose 77.8 2.9 6.4E-05 43.6 4.6 85 301-390 342-428 (439)
55 cd03812 GT1_CapH_like This fam 77.1 11 0.00024 36.9 8.4 40 292-332 259-298 (358)
56 PRK14099 glycogen synthase; Pr 76.7 5 0.00011 42.7 6.0 92 292-390 361-466 (485)
57 KOG1387 Glycosyltransferase [C 75.5 20 0.00043 36.7 9.3 91 291-387 348-443 (465)
58 cd03791 GT1_Glycogen_synthase_ 74.5 17 0.00038 37.9 9.4 39 292-330 363-401 (476)
59 cd04946 GT1_AmsK_like This fam 73.4 12 0.00027 38.5 7.8 93 292-389 301-398 (407)
60 PRK15490 Vi polysaccharide bio 72.7 15 0.00034 39.9 8.4 61 292-355 465-525 (578)
61 cd03796 GT1_PIG-A_like This fa 72.7 19 0.00042 36.7 9.0 95 291-391 261-356 (398)
62 PF12661 hEGF: Human growth fa 72.6 0.94 2E-05 23.6 -0.4 12 24-35 2-13 (13)
63 PHA01630 putative group 1 glyc 72.0 10 0.00022 38.3 6.6 41 291-332 201-241 (331)
64 PRK13608 diacylglycerol glucos 67.3 23 0.0005 36.3 8.3 84 292-386 266-355 (391)
65 TIGR02918 accessory Sec system 66.4 58 0.0013 34.9 11.3 92 293-390 386-487 (500)
66 PLN02939 transferase, transfer 65.8 23 0.00051 40.9 8.4 93 294-390 851-954 (977)
67 cd01635 Glycosyltransferase_GT 62.9 47 0.001 29.5 8.6 40 292-332 174-213 (229)
68 TIGR02468 sucrsPsyn_pln sucros 62.1 32 0.00068 40.2 8.6 93 293-390 561-658 (1050)
69 PLN02605 monogalactosyldiacylg 61.1 47 0.001 33.8 9.1 81 292-383 275-362 (382)
70 PLN00142 sucrose synthase 59.6 46 0.001 37.9 9.2 94 295-391 661-759 (815)
71 PRK05749 3-deoxy-D-manno-octul 59.0 10 0.00022 39.1 3.8 107 292-412 312-423 (425)
72 TIGR01133 murG undecaprenyldip 58.5 11 0.00023 37.3 3.8 84 292-382 243-334 (348)
73 cd03793 GT1_Glycogen_synthase_ 58.3 14 0.00029 40.4 4.6 98 292-391 467-575 (590)
74 PHA01633 putative glycosyl tra 56.4 12 0.00026 38.0 3.7 42 291-333 215-256 (335)
75 PF13692 Glyco_trans_1_4: Glyc 54.7 5.8 0.00013 33.4 0.9 56 291-350 62-118 (135)
76 smart00672 CAP10 Putative lipo 49.9 81 0.0018 30.7 8.2 137 241-386 78-231 (256)
77 PRK00726 murG undecaprenyldiph 45.7 30 0.00065 34.5 4.7 100 292-408 245-353 (357)
78 TIGR02470 sucr_synth sucrose s 44.3 74 0.0016 36.2 7.8 88 301-391 645-736 (784)
79 cd04950 GT1_like_1 Glycosyltra 37.1 31 0.00067 35.0 3.2 40 291-331 265-309 (373)
80 cd03788 GT1_TPS Trehalose-6-Ph 36.2 34 0.00074 36.1 3.5 91 290-386 351-445 (460)
81 PF11119 DUF2633: Protein of u 35.1 37 0.00081 25.5 2.5 28 1-28 1-30 (59)
82 KOG3185 Translation initiation 31.8 33 0.00072 32.0 2.1 32 299-330 20-51 (245)
83 TIGR02400 trehalose_OtsA alpha 31.7 89 0.0019 33.1 5.7 88 290-384 346-438 (456)
84 PLN02275 transferase, transfer 26.7 1.9E+02 0.0042 29.1 7.0 75 247-332 261-341 (371)
85 TIGR03590 PseG pseudaminic aci 25.9 1E+02 0.0023 30.0 4.7 35 290-330 232-266 (279)
86 cd03785 GT1_MurG MurG is an N- 25.7 71 0.0015 31.4 3.5 85 291-384 244-339 (350)
87 TIGR00236 wecB UDP-N-acetylglu 25.7 3.6E+02 0.0079 26.9 8.8 59 263-331 242-300 (365)
88 PRK10125 putative glycosyl tra 23.7 2.8E+02 0.0061 28.6 7.6 63 290-356 297-359 (405)
89 PF13956 Ibs_toxin: Toxin Ibs, 23.0 59 0.0013 18.5 1.3 14 17-30 6-19 (19)
90 PF15024 Glyco_transf_18: Glyc 22.8 84 0.0018 34.2 3.5 44 290-336 332-375 (559)
91 PF05686 Glyco_transf_90: Glyc 22.6 4.4E+02 0.0095 27.4 8.7 138 241-386 152-300 (395)
92 PLN02316 synthase/transferase 21.3 76 0.0017 37.2 3.0 37 295-331 915-951 (1036)
93 COG0438 RfaG Glycosyltransfera 20.5 1E+02 0.0022 28.7 3.3 42 291-333 268-309 (381)
94 COG2355 Zn-dependent dipeptida 20.1 61 0.0013 32.7 1.7 74 307-383 145-218 (313)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=2.4e-62 Score=511.03 Aligned_cols=359 Identities=30% Similarity=0.483 Sum_probs=284.4
Q ss_pred CCCCceEEEecCCcccchhhhhcCCCCCCCCCC-CCCCCCCCCCccccc----------cchhHHHHHHhhcccC----C
Q 014048 51 CSAPLRVYMYDLPRRFHVGMLDHSSPDGLPVTS-ENLPRWPRSSGIKRQ----------HSVEYWLMASLLYDGE----S 115 (431)
Q Consensus 51 c~~~~~IYvYdLP~~fn~~ll~~c~~~~~~~~~-~~~c~~~~n~g~~~~----------~~~e~w~~~~ll~~~~----r 115 (431)
|.+ .+||||+||+.||.++++.|......|.. ..+|.+..|.++++. +..++|+.+++++.|. +
T Consensus 70 ~~~-~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~ 148 (464)
T KOG1021|consen 70 CAG-ASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNR 148 (464)
T ss_pred ccC-cceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHH
Confidence 666 68999999999999999999864212321 127777765554322 2233455555555442 2
Q ss_pred C--ccCeeecCCccCccEEEEeccccccccccCCCC-CCCCchhhHHHHHHHHHHHhcCccccccCCccEEEeecCCCch
Q 014048 116 E--EREAVRVSDPDTAQAFFVPFFSSLSFNTHGHNM-TDPDTEFDRQLQIEILEFLRNSKYWQKSGGRDHVIPMTHPNAF 192 (431)
Q Consensus 116 ~--~~s~~rT~dP~eAdlFfVP~y~~l~~~~~~~~~-~~p~~~~~~~l~~~l~~~L~~~PyW~R~gGrDH~~v~~~d~~~ 192 (431)
+ ..++|||.||++||+||||||++++++++.... .......++.++..++.|++++|||||++|+|||||++|+|+.
T Consensus 149 ~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~ 228 (464)
T KOG1021|consen 149 MLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGD 228 (464)
T ss_pred HhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchh
Confidence 3 468999999999999999999999986653221 1123345677889999999999999999999999999999998
Q ss_pred hhhHHhhcCeEEEeeccCC---CCCCCCCCC-cccccCcccccCCCCCCC----CCCCCCCCcEEEEEeeccccCCChHH
Q 014048 193 RFLRQQLNASILIVADFGR---YPRSMSNLS-KDVVAPYVHVVESFTDDN----PPDPFVARKTLLFFQGNTIRKDEGKV 264 (431)
Q Consensus 193 ~~~~~~~~~ai~~~~~~~~---~~~~~~~~~-~DvviP~~~~~~~~~~~~----~~~~~~~R~~L~~F~G~~~~~~~~~i 264 (431)
......+++++..+.++++ +..+ +.+. +||++||++.+++..... ...+..+|++|++|+|+. .++.+
T Consensus 229 ~~~~~~~~~~~~~i~~~~n~a~ls~~-~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~---~~~~i 304 (464)
T KOG1021|consen 229 FRRRSDWGASISLIPEFCNGALLSLE-FFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAP---AGGQI 304 (464)
T ss_pred eeeccchhhHHHHHHhhCCcceeecc-cccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccc---cCCcH
Confidence 7765555655555566653 2222 3455 999999998776655432 234568999999999996 46899
Q ss_pred HHHHHHHHcCCCC-eEEe---cCCCCCCChhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCC
Q 014048 265 RAKLAKILTGYDD-VHYE---RSAPTTKSIKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDE 340 (431)
Q Consensus 265 R~~L~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ 340 (431)
|+.|+++|++.++ +.+. .+..+|+++..|++.|++|+|||||+||+++|+|+||||.+|||||||+|++++||+++
T Consensus 305 R~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~ 384 (464)
T KOG1021|consen 305 RSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDV 384 (464)
T ss_pred HHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCC
Confidence 9999999999332 3333 33344677889999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeeccccCCcccHHHHHcCCCHHHHHHHHHHHHh-hhhceEecC--CCCCCCHHHHHHHHHHhhhhhhhhh
Q 014048 341 IDYSEFSVFFSIKEAGQPGYMIDQLRQIPKARWIEMWQRLKS-ISHYYEFQY--PPKKEDAVNMVWRQVKNKIPGVQLA 416 (431)
Q Consensus 341 ldw~~fsV~i~~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~-v~~~~~y~~--p~~~~DAf~~~~~~l~~R~~~~k~~ 416 (431)
+||++|||+|+++++++. |.++|.+|+.+++.+||+++++ +.++|.+.. +++.+|||++++.+++.|++.++..
T Consensus 385 ~d~~~fSV~v~~~~v~~~--~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~~~ 461 (464)
T KOG1021|consen 385 LDWTEFSVFVPEKDVPEL--IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLRSR 461 (464)
T ss_pred ccceEEEEEEEHHHhhhH--HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhcccccccc
Confidence 999999999998888872 5999999999999999999995 888899988 7788999999999999999987743
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=2.5e-56 Score=440.17 Aligned_cols=294 Identities=34% Similarity=0.500 Sum_probs=227.9
Q ss_pred CCCCCceEEEecCCcccchhhhhcCCCCCCCCCCCCCCCCCCCCccccccchhHHHHHHhhcccCCCccCeeecCCccCc
Q 014048 50 SCSAPLRVYMYDLPRRFHVGMLDHSSPDGLPVTSENLPRWPRSSGIKRQHSVEYWLMASLLYDGESEEREAVRVSDPDTA 129 (431)
Q Consensus 50 ~c~~~~~IYvYdLP~~fn~~ll~~c~~~~~~~~~~~~c~~~~n~g~~~~~~~e~w~~~~ll~~~~r~~~s~~rT~dP~eA 129 (431)
+|.+ +||||||||++||.+++......... .....+|+.|.++++.++. |+++|+||+||
T Consensus 1 ~~~~-lkVYVY~lp~~~~~~~~~~~~~~~~~------------~~~~~~~~~e~~l~~~l~~-------s~~~T~dp~eA 60 (302)
T PF03016_consen 1 SHRG-LKVYVYPLPPKFNKDLLDPREDEQCS------------WYETSQYALEVILHEALLN-------SPFRTDDPEEA 60 (302)
T ss_pred CCCC-CEEEEEeCCccccccceeccccccCC------------CcccccchHHHHHHHHHHh-------CCcEeCCHHHC
Confidence 3667 79999999999999998433221111 1234678999999999885 46999999999
Q ss_pred cEEEEeccccccccccCCCCCCCCchhhHHHHHHHHHHHhcCccccccCCccEEEeecCCCchhh---hHHhhcCeEEEe
Q 014048 130 QAFFVPFFSSLSFNTHGHNMTDPDTEFDRQLQIEILEFLRNSKYWQKSGGRDHVIPMTHPNAFRF---LRQQLNASILIV 206 (431)
Q Consensus 130 dlFfVP~y~~l~~~~~~~~~~~p~~~~~~~l~~~l~~~L~~~PyW~R~gGrDH~~v~~~d~~~~~---~~~~~~~ai~~~ 206 (431)
|+||||++.++.. +..+.........+.+...+..+++++|||||++|+||||+.++++|.+. .+....+++.++
T Consensus 61 dlF~vP~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~~~~~~~~~~~~~~~~ 138 (302)
T PF03016_consen 61 DLFFVPFYSSCYF--HHWWGSPNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCSFDRNPRLMNNSIRAV 138 (302)
T ss_pred eEEEEEccccccc--ccccCCccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccccccccHhhhccchhhe
Confidence 9999999998864 11111111122344556677788899999999999999999999966554 233444555444
Q ss_pred eccCCCCCCCCCCCcccccCcccccCCCCCCC--CCCCCCCCcEEEEEeeccccCC---ChHHHHHHHHHHcCCCCeEEe
Q 014048 207 ADFGRYPRSMSNLSKDVVAPYVHVVESFTDDN--PPDPFVARKTLLFFQGNTIRKD---EGKVRAKLAKILTGYDDVHYE 281 (431)
Q Consensus 207 ~~~~~~~~~~~~~~~DvviP~~~~~~~~~~~~--~~~~~~~R~~L~~F~G~~~~~~---~~~iR~~L~~~~~~~~~~~~~ 281 (431)
...+.+...++++++||++|+........... ...+..+|++|++|+|++.... ++.+|+.|++.|++.++..+.
T Consensus 139 ~~~~~~~~~~~~~~~Di~~P~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~~~~~~ 218 (302)
T PF03016_consen 139 VAFSSFSSSCFRPGFDIVIPPFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDPDFRCS 218 (302)
T ss_pred eccCCCCcCcccCCCCeeccccccccccCCccccccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCCcceee
Confidence 33444556789999999999986543322111 2346789999999999998763 469999999999998876654
Q ss_pred cCCCCCCChhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccH
Q 014048 282 RSAPTTKSIKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYM 361 (431)
Q Consensus 282 ~~~~~~~~~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l 361 (431)
.....+.+..+|.+.|++|+|||+|+|+++++.||+|||.+|||||||+|++.|||+++|||++|||+|+++|+++ |
T Consensus 219 ~~~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~---l 295 (302)
T PF03016_consen 219 DGSETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPE---L 295 (302)
T ss_pred ecccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHH---H
Confidence 3333344566799999999999999999999999999999999999999999999999999999999999999987 9
Q ss_pred HHHHcCC
Q 014048 362 IDQLRQI 368 (431)
Q Consensus 362 ~~iL~~i 368 (431)
+++|++|
T Consensus 296 ~~iL~~i 302 (302)
T PF03016_consen 296 PEILRSI 302 (302)
T ss_pred HHHHhcC
Confidence 9999986
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-28 Score=248.53 Aligned_cols=309 Identities=18% Similarity=0.187 Sum_probs=218.3
Q ss_pred hhhcCCCCCCCCCCCCCCCCCCCCccc------cc----cchhHHHHHHhhcccCCCccCeeecCCccCccEEEEecccc
Q 014048 70 MLDHSSPDGLPVTSENLPRWPRSSGIK------RQ----HSVEYWLMASLLYDGESEEREAVRVSDPDTAQAFFVPFFSS 139 (431)
Q Consensus 70 ll~~c~~~~~~~~~~~~c~~~~n~g~~------~~----~~~e~w~~~~ll~~~~r~~~s~~rT~dP~eAdlFfVP~y~~ 139 (431)
+...|.. ++|+ |++.|+.++ ||- ++ ++.+.|+.+.+-.. +....+.|+||+.||+..+-+- .
T Consensus 175 ~~~~c~l-hncf-dySRCsltS--gfPVYvyd~D~~~~G~~~d~~lk~~fq~t---~~~n~~~ve~pd~ACiyi~lvg-e 246 (907)
T KOG2264|consen 175 QISPCQL-HNCF-DYSRCSLTS--GFPVYVYDSDIITSGQSEDEWLKQVFQET---IPNNVYLVETPDKACIYIHLVG-E 246 (907)
T ss_pred ccCcccc-hhcc-ccccccccC--CceeEEeccceeecccchHHHHHHHHHHh---cccceeEeeCCCccEEEEEEec-c
Confidence 4456663 5665 678999987 652 22 24567877655432 5677899999999996666442 1
Q ss_pred ccccccCCCCCCCCchhhHHHHHHHHHHHhcCccccccCCccEEEeecCCCchh---hhHHhhcCeEEEeeccCCCCCCC
Q 014048 140 LSFNTHGHNMTDPDTEFDRQLQIEILEFLRNSKYWQKSGGRDHVIPMTHPNAFR---FLRQQLNASILIVADFGRYPRSM 216 (431)
Q Consensus 140 l~~~~~~~~~~~p~~~~~~~l~~~l~~~L~~~PyW~R~gGrDH~~v~~~d~~~~---~~~~~~~~ai~~~~~~~~~~~~~ 216 (431)
. ..|-+.. ..+ ++-|-+.|||+ ++|+||++++....+-. -++...+.||.+.+.|. ...
T Consensus 247 ~---------q~P~~l~----p~e-leklyslp~w~-~dg~Nhvl~Nl~r~s~~~n~lyn~~t~raivvQssf~---~~q 308 (907)
T KOG2264|consen 247 I---------QSPVVLT----PAE-LEKLYSLPHWR-TDGFNHVLFNLGRPSDTQNLLYNFQTGRAIVVQSSFY---TVQ 308 (907)
T ss_pred c---------cCCCcCC----hHh-hhhhhcCcccc-CCCcceEEEEccCccccccceeEeccCceEEEeecce---eee
Confidence 1 0121110 123 33488999997 89999999986532211 13445778999888876 456
Q ss_pred CCCCcccccCcccccCCCC--CCCCCCCCCCCcEEEEEeeccccCCCh--HHHHHHHHHHcCCC-------CeEEecCCC
Q 014048 217 SNLSKDVVAPYVHVVESFT--DDNPPDPFVARKTLLFFQGNTIRKDEG--KVRAKLAKILTGYD-------DVHYERSAP 285 (431)
Q Consensus 217 ~~~~~DvviP~~~~~~~~~--~~~~~~~~~~R~~L~~F~G~~~~~~~~--~iR~~L~~~~~~~~-------~~~~~~~~~ 285 (431)
+||++|+++|+........ ......-+.+|+||++|+|.+.++++. ..+.-..+...+-+ .+....|..
T Consensus 309 ~RpgfDl~V~pv~h~~~e~~~~e~~p~vP~~RkyL~t~qgki~~~~ssLn~~~aF~~e~~adp~~~a~qds~i~qv~c~~ 388 (907)
T KOG2264|consen 309 IRPGFDLPVDPVNHIAVEKNFVELTPLVPFQRKYLITLQGKIESDNSSLNEFSAFSEELSADPSRRAVQDSPIVQVKCSF 388 (907)
T ss_pred eccCCCcccCcccccccCccceecCcccchhhheeEEEEeeecccccccchhhhhHHHhccCCcccccccCceEEEEEee
Confidence 8999999998764332211 112335678999999999999876542 24443333332211 122222221
Q ss_pred C--------------CCChhhHHhhccCccEEec-cCCCCCC-----chhHHHHHHhcceeEEEeCCcccCcCCCCCCCc
Q 014048 286 T--------------TKSIKESTEGMRSSKFCLH-PAGDTPS-----SCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSE 345 (431)
Q Consensus 286 ~--------------~~~~~~~~~~l~~S~FCL~-P~Gd~~~-----s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~ 345 (431)
+ |...++-.+++.+|+|||+ |+||+-- -.|+++|+..||||||+++...|||.+.|||++
T Consensus 389 t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d~rv~S~~~~~r~~eaL~~GavPviLg~~~~LPyqd~idWrr 468 (907)
T KOG2264|consen 389 TCKNQENCSLPEWALCGERERRRQLLKSSTFCLILPPGDPRVISEMFFQRFLEALQLGAVPVILGNSQLLPYQDLIDWRR 468 (907)
T ss_pred ccccCCCCCcchhhhccchHHHHHHhccceeEEEecCCCcchhhHHHHHHHHHHHhcCCeeEEeccccccchHHHHHHHH
Confidence 1 3344567899999999997 8898742 279999999999999999999999999999999
Q ss_pred eEEEeeccccCCcccHHHHHcCCCHHHHHHHHHHHHhhhhceEecCCCCCCCHHHHHHHHHHhhhh
Q 014048 346 FSVFFSIKEAGQPGYMIDQLRQIPKARWIEMWQRLKSISHYYEFQYPPKKEDAVNMVWRQVKNKIP 411 (431)
Q Consensus 346 fsV~i~~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v~~~~~y~~p~~~~DAf~~~~~~l~~R~~ 411 (431)
.++++|.+++.+ ++.+|+++...++.+||++++-+|++++-+. .-.+++++..|+.|+-
T Consensus 469 aal~lPkaR~tE---~HFllrs~~dsDll~mRRqGRl~wEtYls~~----~~~~~tvlA~lR~rlq 527 (907)
T KOG2264|consen 469 AALRLPKARLTE---AHFLLRSFEDSDLLEMRRQGRLFWETYLSDR----HLLARTVLAALRYRLQ 527 (907)
T ss_pred HhhhCCccccch---HHHHHHhcchhhHHHHHhhhhhhHHHHhhHH----HHHHHHHHHHHHHhhC
Confidence 999999999988 9999999999999999999999999987652 3445888888888873
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.57 E-value=1.7e-14 Score=147.05 Aligned_cols=238 Identities=17% Similarity=0.105 Sum_probs=168.6
Q ss_pred cCeeecCCccCccEEEEeccccccccccCCCCCCCCchhhHHHHHHHHHHHhcCccccccCCccEEEeecCCCchhhhHH
Q 014048 118 REAVRVSDPDTAQAFFVPFFSSLSFNTHGHNMTDPDTEFDRQLQIEILEFLRNSKYWQKSGGRDHVIPMTHPNAFRFLRQ 197 (431)
Q Consensus 118 ~s~~rT~dP~eAdlFfVP~y~~l~~~~~~~~~~~p~~~~~~~l~~~l~~~L~~~PyW~R~gGrDH~~v~~~d~~~~~~~~ 197 (431)
.|-+.|.|+++|| .|+|-..-+..+...+. .....|++.-.|.| |.+|..+..-+.|......
T Consensus 134 ~S~yyt~n~N~ac-lf~Ps~d~lnQn~l~~k--------------l~~~ala~l~~wdr--g~nH~~fnmLpGg~p~ynt 196 (691)
T KOG1022|consen 134 LSFYYTFNYNGAC-LFMPSSDELNQNPLSWK--------------LEKVALAKLLVWDR--GVNHEGFNMLPGGDPTYNT 196 (691)
T ss_pred hccceecCCCceE-EEecchhhhccCcchHH--------------HHHHHHhcccchhc--ccceeeEeeccCCCCCccc
Confidence 4668999999999 67888776655433221 11335677789985 9999999877666543322
Q ss_pred ----hhcCeEEEeeccCCCCCCCCCCCcccccCcccccCCCCCCCCCCCCCCCcEEEEEeeccccCCChHHHHHHHHHHc
Q 014048 198 ----QLNASILIVADFGRYPRSMSNLSKDVVAPYVHVVESFTDDNPPDPFVARKTLLFFQGNTIRKDEGKVRAKLAKILT 273 (431)
Q Consensus 198 ----~~~~ai~~~~~~~~~~~~~~~~~~DvviP~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~~~~~~~~iR~~L~~~~~ 273 (431)
-..+++.....|+ ...+++++||.+|..++. .......-...|.+++--.|- +....+|..|.+...
T Consensus 197 aldv~~d~a~~~gggf~---tW~yr~g~dv~ipv~Sp~---~v~~~~~~~g~r~~~l~~~q~---n~~pr~r~~l~el~~ 267 (691)
T KOG1022|consen 197 ALDVGQDEAWYSGGGFG---TWKYRKGNDVYIPVRSPG---NVGRAFLYDGSRYRVLQDCQE---NYGPRIRVSLIELLS 267 (691)
T ss_pred cccCCcceeEEecCCcC---cccccCCCcccccccccc---ccCccccCCccceeeeecccc---ccchHhHHhHHHHHh
Confidence 2345666655666 455889999999987542 111111234456555433221 235678988888875
Q ss_pred CCCC--eEEecCCC-------CCCC--hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCC
Q 014048 274 GYDD--VHYERSAP-------TTKS--IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEID 342 (431)
Q Consensus 274 ~~~~--~~~~~~~~-------~~~~--~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ld 342 (431)
.... +.+..|.. -++. .-+|...++..+||+.-+|.+-...-+.+-+.+||||||..|.+.+||++++|
T Consensus 268 kh~e~~l~l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~vd~y~lpf~~Vvd 347 (691)
T KOG1022|consen 268 KHEERELELPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISVDIYLLPFLGVVD 347 (691)
T ss_pred hccceEEecchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhcccceeeeeehhhhhhhhhhh
Confidence 5533 22222211 1111 23578889999999998888777888999999999999999999999999999
Q ss_pred CCceEEEeeccccCCcccHHHHHcCCCHHHHHHHHHHHHhhh
Q 014048 343 YSEFSVFFSIKEAGQPGYMIDQLRQIPKARWIEMWQRLKSIS 384 (431)
Q Consensus 343 w~~fsV~i~~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v~ 384 (431)
|...||+++|..+.+ +.+.|++|+...+-+||.+.+-.+
T Consensus 348 w~~aSv~~~e~~~~~---v~~~l~~i~~~~i~sl~~r~~~~r 386 (691)
T KOG1022|consen 348 WIVASVWCMEYYAGK---VMDALLNIETAGICSLQLRRIGSR 386 (691)
T ss_pred ceeeeEEeehhhHHH---HHHHhhcchhcchhhhhhhhhhhh
Confidence 999999999988776 999999999999999988765443
No 5
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=96.65 E-value=0.0038 Score=63.61 Aligned_cols=140 Identities=16% Similarity=0.193 Sum_probs=63.1
Q ss_pred CCCCcccccCcccccCCCCCC---CCCCCCCCCcEEE-EEeeccccCCChHHHHHHHHHHcCCCCeEEe-cCCCC-CCCh
Q 014048 217 SNLSKDVVAPYVHVVESFTDD---NPPDPFVARKTLL-FFQGNTIRKDEGKVRAKLAKILTGYDDVHYE-RSAPT-TKSI 290 (431)
Q Consensus 217 ~~~~~DvviP~~~~~~~~~~~---~~~~~~~~R~~L~-~F~G~~~~~~~~~iR~~L~~~~~~~~~~~~~-~~~~~-~~~~ 290 (431)
++.+-||.+||.......... .......+++.++ .++.+.. ...-|..+++.+++.-.+... .|... +...
T Consensus 142 Yr~dSDi~~py~~~~~~~~~~~~~~~~~~~~~K~~~~~w~~Snc~---~~~~R~~~~~~L~~~~~vd~yG~c~~~~~~~~ 218 (349)
T PF00852_consen 142 YRRDSDIPLPYGYFSPRESPSEKDDLPNILKKKTKLAAWIVSNCN---PHSGREEYVRELSKYIPVDSYGKCGNNNPCPR 218 (349)
T ss_dssp -------------------------------TSSEEEEE--S-S-----H-HHHHHHHHHHTTS-EEE-SSTT--SSS--
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEeeCcC---CcccHHHHHHHHHhhcCeEccCCCCCCCCccc
Confidence 567789999987543211111 1112234444454 4555543 233499999999887555443 33111 1122
Q ss_pred hhHHhhccCccEEeccCC---CCCCchhHHHHHHhcceeEEEe--CC-c--ccCcCCCCCCCceEEEeeccccCCcccHH
Q 014048 291 KESTEGMRSSKFCLHPAG---DTPSSCRLFDAIVSHCVPVIVS--DR-I--ELPFEDEIDYSEFSVFFSIKEAGQPGYMI 362 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~G---d~~~s~Rl~DAi~~GCIPVii~--d~-~--~lPf~~~ldw~~fsV~i~~~d~~~~~~l~ 362 (431)
....+.+++-+|.|+..- ....+--+|+|+.+|||||+++ .. + .+|=+..|+.++| ..+..|.
T Consensus 219 ~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~df---------~s~~~La 289 (349)
T PF00852_consen 219 DCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVDDF---------KSPKELA 289 (349)
T ss_dssp S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGGGS---------SSHHHHH
T ss_pred ccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchhcC---------CCHHHHH
Confidence 347788999999999643 4556789999999999999999 33 3 3665665555444 2222366
Q ss_pred HHHcCC
Q 014048 363 DQLRQI 368 (431)
Q Consensus 363 ~iL~~i 368 (431)
+.|+.+
T Consensus 290 ~yl~~l 295 (349)
T PF00852_consen 290 DYLKYL 295 (349)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666665
No 6
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.00 E-value=0.047 Score=53.50 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=63.8
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCC
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQI 368 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i 368 (431)
..+..+.|++|.+++.|.+....+..++|||.+|| |||.++.-. ..+.+.-....+.++..+..+.. .|.+++.
T Consensus 257 ~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~-- 331 (364)
T cd03814 257 GEELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGG--PADIVTDGENGLLVEPGDAEAFAAALAALLA-- 331 (364)
T ss_pred HHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCC--chhhhcCCcceEEcCCCCHHHHHHHHHHHHc--
Confidence 34577889999999999887666788999999999 788777432 22233323445555555543211 1334443
Q ss_pred CHHHHHHHHHHHHhhhhceEec
Q 014048 369 PKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 369 ~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
.+++..+|.++..+....+.|.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~ 353 (364)
T cd03814 332 DPELRRRMAARARAEAERRSWE 353 (364)
T ss_pred CHHHHHHHHHHHHHHHhhcCHH
Confidence 5788889998888877665554
No 7
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=95.85 E-value=0.047 Score=52.70 Aligned_cols=94 Identities=9% Similarity=0.153 Sum_probs=63.1
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcCC--
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQI-- 368 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i-- 368 (431)
.++.+.|.+|.+.+.|.-....+..++|||.+|| |||..+. -.+.+.+......+.++..+..+ +.+.|..+
T Consensus 267 ~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~--~~~~~~~~~~~~g~~~~~~~~~~---l~~~i~~~~~ 340 (374)
T cd03801 267 EDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDV--GGIPEVVEDGETGLLVPPGDPEA---LAEAILRLLD 340 (374)
T ss_pred hhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCC--CChhHHhcCCcceEEeCCCCHHH---HHHHHHHHHc
Confidence 5678889999999999765556788999999997 6777665 22334444455666776655433 54444442
Q ss_pred CHHHHHHHHHHHH-hhhhceEec
Q 014048 369 PKARWIEMWQRLK-SISHYYEFQ 390 (431)
Q Consensus 369 ~~~~i~~Mr~~l~-~v~~~~~y~ 390 (431)
.++...+|.++.+ .+.+.+.|.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~ 363 (374)
T cd03801 341 DPELRRRLGEAARERVAERFSWD 363 (374)
T ss_pred ChHHHHHHHHHHHHHHHHhcCHH
Confidence 4667788888877 455555444
No 8
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=95.69 E-value=0.022 Score=50.76 Aligned_cols=86 Identities=19% Similarity=0.254 Sum_probs=50.4
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcCCC
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQIP 369 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i~ 369 (431)
..+..+.++.|.+.++|......+..+.|||.+|| |||.++.-. +.+.+.=..-.+.++..++.+ +.+.+.++-
T Consensus 83 ~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~~~--~~e~~~~~~~g~~~~~~~~~~---l~~~i~~~l 156 (172)
T PF00534_consen 83 DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDIGG--NNEIINDGVNGFLFDPNDIEE---LADAIEKLL 156 (172)
T ss_dssp HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESSTH--HHHHSGTTTSEEEESTTSHHH---HHHHHHHHH
T ss_pred ccccccccccceecccccccccccccccccccccc-ceeeccccC--CceeeccccceEEeCCCCHHH---HHHHHHHHH
Confidence 34678889999999999887778899999999999 666666321 122221112234444444333 444444332
Q ss_pred --HHHHHHHHHHHH
Q 014048 370 --KARWIEMWQRLK 381 (431)
Q Consensus 370 --~~~i~~Mr~~l~ 381 (431)
++....|.++.+
T Consensus 157 ~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 157 NDPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhc
Confidence 355666666654
No 9
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=95.49 E-value=0.13 Score=49.36 Aligned_cols=95 Identities=11% Similarity=0.053 Sum_probs=61.6
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcCC--
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQI-- 368 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i-- 368 (431)
.+..+.|+++.+++.|.........++|||.+||.+ |.++....+ ++.++-....+.++..|+.+ +.+.+..+
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pv-i~~~~~~~~-~~~~~~~~~g~~~~~~~~~~---~~~~i~~ll~ 318 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPV-ISFDCPTGP-SEIIEDGVNGLLVPNGDVEA---LAEALLRLME 318 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCE-EEecCCCch-HhhhccCcceEEeCCCCHHH---HHHHHHHHHc
Confidence 456788999999999976555578899999999864 555432222 12223234555666555433 43333333
Q ss_pred CHHHHHHHHHHHHhhhhceEec
Q 014048 369 PKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 369 ~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
.++...+|.++.+...+.|.|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~ 340 (348)
T cd03820 319 DEELRKRMGANARESAERFSIE 340 (348)
T ss_pred CHHHHHHHHHHHHHHHHHhCHH
Confidence 6788888998887777765544
No 10
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=95.18 E-value=0.11 Score=51.00 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=62.5
Q ss_pred hhHHhhccCccEEeccCCCC--CCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcCC
Q 014048 291 KESTEGMRSSKFCLHPAGDT--PSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQI 368 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~--~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i 368 (431)
.+..+.|+.|.+++.|.... ..+..+.|||.+|+ |||.++.-. .+.+.+. .-.+.++..+..+ +.+.|..+
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~~-~~g~~~~~~d~~~---~~~~l~~l 331 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLDG-GTGLLVPPGDPAA---LAEAIRRL 331 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeeeC-CCcEEEcCCCHHH---HHHHHHHH
Confidence 45778899999999997766 66788999999999 999887533 2333332 3344555444433 43333322
Q ss_pred --CHHHHHHHHHHHHhhhhceEec
Q 014048 369 --PKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 369 --~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
.+++..+|+++.++..+.|.|.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~s~~ 355 (366)
T cd03822 332 LADPELAQALRARAREYARAMSWE 355 (366)
T ss_pred HcChHHHHHHHHHHHHHHhhCCHH
Confidence 3578889999998887764444
No 11
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=94.93 E-value=0.13 Score=50.30 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=60.3
Q ss_pred hhHHhhccCccEEeccCCCCCC-----chhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHH
Q 014048 291 KESTEGMRSSKFCLHPAGDTPS-----SCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQL 365 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~-----s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL 365 (431)
.++.+.|+.+.++++|...+.. ...+.|||.+|| |||..+.-..+- .+.-....+.++..+..+ +.+.|
T Consensus 286 ~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~~~--~~~~~~~g~~~~~~~~~~---l~~~i 359 (394)
T cd03794 286 EELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGESAE--LVEEAGAGLVVPPGDPEA---LAAAI 359 (394)
T ss_pred HHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCchh--hhccCCcceEeCCCCHHH---HHHHH
Confidence 4577889999999999775532 456899999996 888876543221 111114445555545433 44444
Q ss_pred cCC--CHHHHHHHHHHHHhhhh-ceEec
Q 014048 366 RQI--PKARWIEMWQRLKSISH-YYEFQ 390 (431)
Q Consensus 366 ~~i--~~~~i~~Mr~~l~~v~~-~~~y~ 390 (431)
..+ .+++..+|.++..+... +|.|.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 387 (394)
T cd03794 360 LELLDDPEERAEMGENGRRYVEEKFSRE 387 (394)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHhhcHH
Confidence 443 67888888888877654 55544
No 12
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=94.69 E-value=0.16 Score=53.53 Aligned_cols=95 Identities=13% Similarity=0.154 Sum_probs=65.5
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCC---CceEEEeeccccCCcc-cHHHHHc
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDY---SEFSVFFSIKEAGQPG-YMIDQLR 366 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw---~~fsV~i~~~d~~~~~-~l~~iL~ 366 (431)
++..+.|+.+..++.|......+..++|||.+| +|||.++.-.. .++++- .+..+.++..|..+.. .|.++|.
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~gg~--~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~ 399 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGGI--PDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLA 399 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCCCc--HhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHh
Confidence 467788999999999987666678899999999 89998875322 233332 4556666665554311 1333443
Q ss_pred CCCHHHHHHHHHHHHhhhhceEec
Q 014048 367 QIPKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 367 ~i~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
.++...+|.++.++....|.|.
T Consensus 400 --~~~~~~~~~~~a~~~~~~fsw~ 421 (465)
T PLN02871 400 --DPELRERMGAAAREEVEKWDWR 421 (465)
T ss_pred --CHHHHHHHHHHHHHHHHhCCHH
Confidence 5778889999998877765554
No 13
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=94.53 E-value=0.23 Score=50.73 Aligned_cols=118 Identities=17% Similarity=0.203 Sum_probs=70.6
Q ss_pred HHHHHHHHHcC---CCCeEEecCCCCCCChhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCC
Q 014048 264 VRAKLAKILTG---YDDVHYERSAPTTKSIKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDE 340 (431)
Q Consensus 264 iR~~L~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ 340 (431)
.++.+++.+.. .+.+.+.... ...++.+.|+.|..++.|.-....+..++|||.+|| |||.++.- +..+.
T Consensus 266 ~~~~~~~~~~~~~~~~~V~f~G~v----~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~--g~~e~ 338 (396)
T cd03818 266 WKQHMLDELGGRLDLSRVHFLGRV----PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTA--PVREV 338 (396)
T ss_pred HHHHHHHHhhcccCcceEEEeCCC----CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCC--Cchhh
Confidence 45555555543 2345554321 234567788888888887654444568999999998 78877643 33455
Q ss_pred CCCCceEEEeeccccCCcc-cHHHHHcCCCHHHHHHHHHHHHhhhh-ceEec
Q 014048 341 IDYSEFSVFFSIKEAGQPG-YMIDQLRQIPKARWIEMWQRLKSISH-YYEFQ 390 (431)
Q Consensus 341 ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~~~~i~~Mr~~l~~v~~-~~~y~ 390 (431)
+.-..-.+.++..|..... .|.++|. .+++..+|.++.++... +|.|.
T Consensus 339 i~~~~~G~lv~~~d~~~la~~i~~ll~--~~~~~~~l~~~ar~~~~~~fs~~ 388 (396)
T cd03818 339 ITDGENGLLVDFFDPDALAAAVIELLD--DPARRARLRRAARRTALRYDLLS 388 (396)
T ss_pred cccCCceEEcCCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHhccHH
Confidence 5444455666655543311 1444444 46778888888876543 35543
No 14
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=94.33 E-value=0.32 Score=50.64 Aligned_cols=135 Identities=15% Similarity=0.157 Sum_probs=74.9
Q ss_pred cEEEEEeeccccCCChHHHHHHHHHHcC---CCCeEEecCCCCCCChhhHHhhccCccEEeccCCCCCCchhHHHHHHhc
Q 014048 247 KTLLFFQGNTIRKDEGKVRAKLAKILTG---YDDVHYERSAPTTKSIKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSH 323 (431)
Q Consensus 247 ~~L~~F~G~~~~~~~~~iR~~L~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~G 323 (431)
+.-+.+.|..+.......+..|.++.++ .+.+.+.... ...+..+.|+.|..++.|.=+...+..+.|||.+|
T Consensus 273 ~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v----~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G 348 (419)
T cd03806 273 KIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNA----PFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG 348 (419)
T ss_pred ceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCC----CHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC
Confidence 4556677764332222333334333222 2346555321 23467788999999998875555678899999999
Q ss_pred ceeEEEeCCcccCcCCCCC---CCceEEEeeccccCCcc-cHHHHHcCCCHHHHHHHHHHHHhhhhceEec
Q 014048 324 CVPVIVSDRIELPFEDEID---YSEFSVFFSIKEAGQPG-YMIDQLRQIPKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 324 CIPVii~d~~~lPf~~~ld---w~~fsV~i~~~d~~~~~-~l~~iL~~i~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
|.||.-... -|.++++. -..-.+.++ +..+.. .|.++|+. ++++...|+++.+++..+|.+.
T Consensus 349 ~pvIa~~~g--gp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~-~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 349 LIPLAHASG--GPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSL-SEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred CcEEEEcCC--CCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhhCHH
Confidence 977654322 24445442 122222222 222211 24444443 6666667787777777776543
No 15
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=94.18 E-value=0.22 Score=48.05 Aligned_cols=91 Identities=13% Similarity=0.146 Sum_probs=57.3
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcCC--C
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQI--P 369 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i--~ 369 (431)
+..+.++.|.+++.|......+..++|||.+|+ |||.++.-.. .+.+.=....+.++..+..+ +.+.+..+ .
T Consensus 256 ~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~--~~~i~~~~~g~~~~~~~~~~---~~~~i~~l~~~ 329 (359)
T cd03808 256 DVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGC--REAVIDGVNGFLVPPGDAEA---LADAIERLIED 329 (359)
T ss_pred cHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCc--hhhhhcCcceEEECCCCHHH---HHHHHHHHHhC
Confidence 466788999999999766656788999999995 7777764322 22232233455565554433 33333322 4
Q ss_pred HHHHHHHHHHHHhh-hhceE
Q 014048 370 KARWIEMWQRLKSI-SHYYE 388 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v-~~~~~ 388 (431)
++...+|.++.++. ..+|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~s 349 (359)
T cd03808 330 PELRARMGQAARKRAEEEFD 349 (359)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 67777777776665 45543
No 16
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=94.00 E-value=0.29 Score=47.70 Aligned_cols=93 Identities=11% Similarity=0.229 Sum_probs=57.1
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIP 369 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~ 369 (431)
.+..+.+.++.+++.|.-....+..++|||.+|| |||.++.--+ .+.+.- ...+.++.+ ..+.. .|.+++. .
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~~--~~~~~~-~~~~~~~~~-~~~~~~~i~~l~~--~ 345 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVPW--QELIEY-GCGWVVDDD-VDALAAALRRALE--L 345 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCCH--HHHhhc-CceEEeCCC-hHHHHHHHHHHHh--C
Confidence 3567788999999999765556788999999996 8888764322 222222 334444432 22200 1333333 3
Q ss_pred HHHHHHHHHHHHhh-hhceEec
Q 014048 370 KARWIEMWQRLKSI-SHYYEFQ 390 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v-~~~~~y~ 390 (431)
+++..+|.++.++. .+.|.|.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 346 PQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred HHHHHHHHHHHHHHHHHhcCHH
Confidence 47788888888776 5665554
No 17
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=93.99 E-value=0.36 Score=49.22 Aligned_cols=95 Identities=12% Similarity=0.072 Sum_probs=61.9
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIP 369 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~ 369 (431)
.+..+.|+.+..++.|.=....+..+.|||.+|| |||..+.--. .+.+.=....+.++..|..... .|.++|. .
T Consensus 294 ~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~~--~e~i~~~~~g~~~~~~d~~~la~~i~~~l~--~ 368 (405)
T TIGR03449 294 EELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGGL--PVAVADGETGLLVDGHDPADWADALARLLD--D 368 (405)
T ss_pred HHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCCc--HhhhccCCceEECCCCCHHHHHHHHHHHHh--C
Confidence 4567889999988888644445678999999996 8888774322 2333323445566655543311 1344444 4
Q ss_pred HHHHHHHHHHHHhhhhceEec
Q 014048 370 KARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
++...+|.++.++..+.|.|.
T Consensus 369 ~~~~~~~~~~~~~~~~~fsw~ 389 (405)
T TIGR03449 369 PRTRIRMGAAAVEHAAGFSWA 389 (405)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 677889999888877776655
No 18
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=93.84 E-value=0.49 Score=46.04 Aligned_cols=89 Identities=12% Similarity=0.075 Sum_probs=57.6
Q ss_pred hhHHhhccCccEEeccCC-CCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCC
Q 014048 291 KESTEGMRSSKFCLHPAG-DTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQI 368 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~G-d~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i 368 (431)
.+..+.++.|..++.|.- .......+.|||.+| +|||.++.- ...+.++.....+.++..|+.+.. .|.+++.
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~-- 328 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIG--GMAELVRDGVNGLLFPPGDAEDLAAALERLID-- 328 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCC--CHHHHhcCCCcEEEECCCCHHHHHHHHHHHHh--
Confidence 567788999999999963 234577899999999 677777642 123334444456666666543311 1344444
Q ss_pred CHHHHHHHHHHHHhhh
Q 014048 369 PKARWIEMWQRLKSIS 384 (431)
Q Consensus 369 ~~~~i~~Mr~~l~~v~ 384 (431)
.++...+|+++.++..
T Consensus 329 ~~~~~~~~~~~~~~~~ 344 (359)
T cd03823 329 DPDLLERLRAGIEPPR 344 (359)
T ss_pred ChHHHHHHHHhHHHhh
Confidence 5777888887776544
No 19
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=93.51 E-value=0.18 Score=50.67 Aligned_cols=95 Identities=12% Similarity=0.093 Sum_probs=61.6
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIP 369 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~ 369 (431)
.+..+.++.|..++.|.-.......++|||.+| +|||.++.-. ..+.+.-....+.++..+..+.. .|.+++. .
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G-~Pvi~s~~~~--~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~--~ 368 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACG-LPVVATAVGG--PRDIVVDGVTGLLVDPRDPEALAAALRRLLT--D 368 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcC-CCEEECCCCC--HHHHccCCCCeEEeCCCCHHHHHHHHHHHHh--C
Confidence 356777889999999976555667899999999 5999887432 22333333445566655543311 1334443 4
Q ss_pred HHHHHHHHHHHHhhh-hceEec
Q 014048 370 KARWIEMWQRLKSIS-HYYEFQ 390 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v~-~~~~y~ 390 (431)
+++..+|.++.++.. ++|.|.
T Consensus 369 ~~~~~~~~~~a~~~~~~~~s~~ 390 (398)
T cd03800 369 PALRRRLSRAGLRRARARYTWE 390 (398)
T ss_pred HHHHHHHHHHHHHHHHHhCCHH
Confidence 778888988887755 666554
No 20
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.46 E-value=0.21 Score=49.78 Aligned_cols=94 Identities=14% Similarity=0.262 Sum_probs=60.1
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCCH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIPK 370 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~~ 370 (431)
+..+.|+.|..++.|.-.......+.|||.+| +|||.++.-. ..+.+.-..-...++..|..+.. .|.+++. .+
T Consensus 263 ~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~--~~ 337 (371)
T cd04962 263 HVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAGG--IPEVVKHGETGFLVDVGDVEAMAEYALSLLE--DD 337 (371)
T ss_pred cHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCCC--chhhhcCCCceEEcCCCCHHHHHHHHHHHHh--CH
Confidence 46678999999999975444577899999999 7888887543 23333332333445544543311 1333333 57
Q ss_pred HHHHHHHHHHHhh-hhceEec
Q 014048 371 ARWIEMWQRLKSI-SHYYEFQ 390 (431)
Q Consensus 371 ~~i~~Mr~~l~~v-~~~~~y~ 390 (431)
+...+|+++.++. ..+|.+.
T Consensus 338 ~~~~~~~~~~~~~~~~~fs~~ 358 (371)
T cd04962 338 ELWQEFSRAARNRAAERFDSE 358 (371)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 7888999988876 5565544
No 21
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=93.30 E-value=0.33 Score=47.54 Aligned_cols=92 Identities=13% Similarity=0.215 Sum_probs=59.8
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcC-C-
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQ-I- 368 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~-i- 368 (431)
.+..+.++.+.+++.|.-....+..++|||.+|+ |||.++.-. ..+.+. +..+.++..+..+ +.+.|.. +
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~~--~~e~~~--~~~~~~~~~~~~~---~~~~i~~l~~ 335 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNISS--LPEVAG--DAALYFDPLDPEA---LAAAIERLLE 335 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCCC--ccceec--CceeeeCCCCHHH---HHHHHHHHhc
Confidence 4567889999999998644444677999999996 777765422 222332 3445555555433 4444443 2
Q ss_pred CHHHHHHHHHHHHhhhhceEec
Q 014048 369 PKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 369 ~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
.++...+|.++.+++...|.|.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~sw~ 357 (365)
T cd03809 336 DPALREELRERGLARAKRFSWE 357 (365)
T ss_pred CHHHHHHHHHHHHHHHHhCCHH
Confidence 5777888888888777776655
No 22
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=93.13 E-value=0.64 Score=46.18 Aligned_cols=94 Identities=15% Similarity=0.222 Sum_probs=58.6
Q ss_pred hhHHhhccCccEEeccCCC------CCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHH
Q 014048 291 KESTEGMRSSKFCLHPAGD------TPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQ 364 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd------~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~i 364 (431)
.+..+.++.|...+.|.-. ......++|||.+|| |||.++.-.. .+.+.-....+.++..+..+ +.+.
T Consensus 256 ~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~~--~e~i~~~~~g~~~~~~d~~~---l~~~ 329 (367)
T cd05844 256 AEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGGI--PEAVEDGETGLLVPEGDVAA---LAAA 329 (367)
T ss_pred HHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCCc--hhheecCCeeEEECCCCHHH---HHHH
Confidence 4566778888888877421 123678999999996 9998876432 23333345566676555433 4333
Q ss_pred HcCC--CHHHHHHHHHHHHhh-hhceEec
Q 014048 365 LRQI--PKARWIEMWQRLKSI-SHYYEFQ 390 (431)
Q Consensus 365 L~~i--~~~~i~~Mr~~l~~v-~~~~~y~ 390 (431)
|..+ .++...+|.++.++. .++|.|.
T Consensus 330 i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 330 LGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 3322 466778888777664 4566554
No 23
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=93.03 E-value=0.28 Score=48.40 Aligned_cols=93 Identities=11% Similarity=0.147 Sum_probs=60.6
Q ss_pred hhHHhhccCccEEeccC-CCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHH---c
Q 014048 291 KESTEGMRSSKFCLHPA-GDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQL---R 366 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~-Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL---~ 366 (431)
.+..+.|+.|...+.|. -.......++|||.+|| |||..+.- +..+.+.-....+.++..+... +.+.| .
T Consensus 255 ~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~~--~~~e~i~~~~~g~~~~~~~~~~---l~~~i~~~~ 328 (355)
T cd03819 255 SDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDHG--GARETVRPGETGLLVPPGDAEA---LAQALDQIL 328 (355)
T ss_pred ccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCCC--CcHHHHhCCCceEEeCCCCHHH---HHHHHHHHH
Confidence 35678889999999986 33334678999999999 77777632 2344444444455566555543 44443 2
Q ss_pred CCCHHHHHHHHHHHHhhh-hceEe
Q 014048 367 QIPKARWIEMWQRLKSIS-HYYEF 389 (431)
Q Consensus 367 ~i~~~~i~~Mr~~l~~v~-~~~~y 389 (431)
..++++..+|.++.++.. .+|.|
T Consensus 329 ~~~~~~~~~~~~~a~~~~~~~f~~ 352 (355)
T cd03819 329 SLLPEGRAKMFAKARMCVETLFSY 352 (355)
T ss_pred hhCHHHHHHHHHHHHHHHHHhhhh
Confidence 236888889998888765 44444
No 24
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=92.93 E-value=0.1 Score=52.54 Aligned_cols=90 Identities=21% Similarity=0.273 Sum_probs=62.1
Q ss_pred hhhHHhhccCccEEeccCCCC-----------CCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCc
Q 014048 290 IKESTEGMRSSKFCLHPAGDT-----------PSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQP 358 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~-----------~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~ 358 (431)
.++..+.++. .|+|++.+++ ..-..++++|.+| +|||.++.-.++ +.+.-...-+.++ ++.+
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-~PVI~~~~~~~~--~~V~~~~~G~~v~--~~~e- 289 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-LPVIVWSKAAIA--DFIVENGLGFVVD--SLEE- 289 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-CCEEECCCccHH--HHHHhCCceEEeC--CHHH-
Confidence 3445555655 9999987761 1124588899988 699998764433 3333344555554 2223
Q ss_pred ccHHHHHcCCCHHHHHHHHHHHHhhhhceE
Q 014048 359 GYMIDQLRQIPKARWIEMWQRLKSISHYYE 388 (431)
Q Consensus 359 ~~l~~iL~~i~~~~i~~Mr~~l~~v~~~~~ 388 (431)
+.+.|.+++++++.+|+++++++.+.+-
T Consensus 290 --l~~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 290 --LPEIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred --HHHHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 8889999999999999999999987754
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=92.42 E-value=0.52 Score=47.40 Aligned_cols=93 Identities=12% Similarity=0.077 Sum_probs=59.2
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcCC--C
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQI--P 369 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i--~ 369 (431)
+..+.|+.|..++.|.-.......+.|||.+|+ |||.+|.-. ..+.+.-......++..|..+ +.+.|..+ .
T Consensus 265 ~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~g--~~e~i~~~~~g~~~~~~d~~~---la~~i~~l~~~ 338 (374)
T TIGR03088 265 DVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVGG--NPELVQHGVTGALVPPGDAVA---LARALQPYVSD 338 (374)
T ss_pred CHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCCC--cHHHhcCCCceEEeCCCCHHH---HHHHHHHHHhC
Confidence 466778889988888654445788999999996 999987532 233444345566666555433 43333322 4
Q ss_pred HHHHHHHHHHHHhh-hhceEec
Q 014048 370 KARWIEMWQRLKSI-SHYYEFQ 390 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v-~~~~~y~ 390 (431)
+++..+|.++.++. ...|.+.
T Consensus 339 ~~~~~~~~~~a~~~~~~~fs~~ 360 (374)
T TIGR03088 339 PAARRAHGAAGRARAEQQFSIN 360 (374)
T ss_pred HHHHHHHHHHHHHHHHHhCCHH
Confidence 66667777666654 3555554
No 26
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=91.17 E-value=1.5 Score=44.36 Aligned_cols=94 Identities=16% Similarity=0.098 Sum_probs=58.8
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcCCCH
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQIPK 370 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i~~ 370 (431)
....+.++.+..++.|.........+.|||.+| +|||.++.-..+ +.+.-....+.++..+... ..|.+.|. .+
T Consensus 265 ~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~--~~i~~~~~g~~~~~~~~~a-~~i~~ll~--~~ 338 (372)
T cd03792 265 LEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP--LQIEDGETGFLVDTVEEAA-VRILYLLR--DP 338 (372)
T ss_pred HHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch--hhcccCCceEEeCCcHHHH-HHHHHHHc--CH
Confidence 456677889999998876555678999999999 699998754333 2222222223333222110 12445554 47
Q ss_pred HHHHHHHHHHHhh-hhceEec
Q 014048 371 ARWIEMWQRLKSI-SHYYEFQ 390 (431)
Q Consensus 371 ~~i~~Mr~~l~~v-~~~~~y~ 390 (431)
+...+|.++.++. ...|.|.
T Consensus 339 ~~~~~~~~~a~~~~~~~~s~~ 359 (372)
T cd03792 339 ELRRKMGANAREHVRENFLIT 359 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCHH
Confidence 7788998888875 4667665
No 27
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=90.88 E-value=1.4 Score=44.44 Aligned_cols=98 Identities=10% Similarity=0.088 Sum_probs=59.7
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCc---ccHHHHHc
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQP---GYMIDQLR 366 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~---~~l~~iL~ 366 (431)
..+..+.++.|..++.|.-.......+.|||.+|| |||.++.-.. .+.+.-....+.++..+.... ..+.+.|.
T Consensus 271 ~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~~--~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~ 347 (388)
T TIGR02149 271 KEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGGI--PEVVVDGETGFLVPPDNSDADGFQAELAKAIN 347 (388)
T ss_pred HHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCCH--HHHhhCCCceEEcCCCCCcccchHHHHHHHHH
Confidence 34567788999999998655555678899999998 8888875322 223322333445554443100 11333333
Q ss_pred CC--CHHHHHHHHHHHHhh-hhceEec
Q 014048 367 QI--PKARWIEMWQRLKSI-SHYYEFQ 390 (431)
Q Consensus 367 ~i--~~~~i~~Mr~~l~~v-~~~~~y~ 390 (431)
.+ .+++..+|.++.++. .+.|.|.
T Consensus 348 ~l~~~~~~~~~~~~~a~~~~~~~~s~~ 374 (388)
T TIGR02149 348 ILLADPELAKKMGIAGRKRAEEEFSWG 374 (388)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 22 577788888887764 4555554
No 28
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=90.88 E-value=0.82 Score=44.19 Aligned_cols=94 Identities=11% Similarity=0.104 Sum_probs=53.9
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIP 369 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~ 369 (431)
.+..+.+.+|.+++.|......+..++|||.+|+ |||.++.-.. .+.+.-....+.+...+..+.. .|.+++..
T Consensus 270 ~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~~~--~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-- 344 (377)
T cd03798 270 EEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGI--PEIITDGENGLLVPPGDPEALAEAILRLLAD-- 344 (377)
T ss_pred HHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCCCh--HHHhcCCcceeEECCCCHHHHHHHHHHHhcC--
Confidence 4567889999999999876666788999999998 6777654322 1222223333455544543311 13333332
Q ss_pred HHHHHHHHHHHHhhhhceEec
Q 014048 370 KARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
++. ...+++...+.+.|.|.
T Consensus 345 ~~~-~~~~~~~~~~~~~~s~~ 364 (377)
T cd03798 345 PWL-RLGRAARRRVAERFSWE 364 (377)
T ss_pred cHH-HHhHHHHHHHHHHhhHH
Confidence 222 33444444555665554
No 29
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=90.65 E-value=1.9 Score=44.71 Aligned_cols=93 Identities=13% Similarity=0.211 Sum_probs=61.0
Q ss_pred hhHHhhccCccEEeccCC-------CCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHH
Q 014048 291 KESTEGMRSSKFCLHPAG-------DTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMID 363 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~G-------d~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~ 363 (431)
.+..+.++++..++.|.= ++ ....+.|||.+|+ |||.++.--.| +.+.-..-.+.++..|... +.+
T Consensus 290 ~el~~~l~~aDv~v~pS~~~~~g~~Eg-~p~~llEAma~G~-PVI~t~~~g~~--E~v~~~~~G~lv~~~d~~~---la~ 362 (406)
T PRK15427 290 HEVKAMLDDADVFLLPSVTGADGDMEG-IPVALMEAMAVGI-PVVSTLHSGIP--ELVEADKSGWLVPENDAQA---LAQ 362 (406)
T ss_pred HHHHHHHHhCCEEEECCccCCCCCccC-ccHHHHHHHhCCC-CEEEeCCCCch--hhhcCCCceEEeCCCCHHH---HHH
Confidence 456788999999998852 23 3567999999995 99988754333 3333344456677666544 444
Q ss_pred HHcCC---CHHHHHHHHHHHHhh-hhceEec
Q 014048 364 QLRQI---PKARWIEMWQRLKSI-SHYYEFQ 390 (431)
Q Consensus 364 iL~~i---~~~~i~~Mr~~l~~v-~~~~~y~ 390 (431)
.|..+ ++++..+|.++.++. ...|-+.
T Consensus 363 ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~ 393 (406)
T PRK15427 363 RLAAFSQLDTDELAPVVKRAREKVETDFNQQ 393 (406)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHhcCHH
Confidence 44433 677788898888764 4555444
No 30
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=90.11 E-value=1.5 Score=43.01 Aligned_cols=93 Identities=10% Similarity=0.122 Sum_probs=53.3
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCCH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIPK 370 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~~ 370 (431)
+..+.|+.|.+.+.|.........++|||.+|| |||.+|.-.. .+.+.-. ...++..+..+.. .|.++|. .++
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~~~--~e~i~~~--g~~~~~~~~~~~~~~i~~ll~-~~~ 328 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAGGV--REVVGDS--GLIVPISDPEALANKIDEILK-MSG 328 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCCCh--hhEecCC--ceEeCCCCHHHHHHHHHHHHh-CCH
Confidence 456778889998888776556788999999999 8888764221 2222112 2333434433311 1333332 355
Q ss_pred HHHHHHHHHHHhhhhceEec
Q 014048 371 ARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 371 ~~i~~Mr~~l~~v~~~~~y~ 390 (431)
+....|.+.-..+.+.|.|.
T Consensus 329 ~~~~~~~~~~~~~~~~~s~~ 348 (360)
T cd04951 329 EERDIIGARRERIVKKFSIN 348 (360)
T ss_pred HHHHHHHHHHHHHHHhcCHH
Confidence 55566665533455555443
No 31
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=90.01 E-value=1.8 Score=43.59 Aligned_cols=93 Identities=12% Similarity=0.050 Sum_probs=55.6
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCc-ccHHHHHcCCCH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQP-GYMIDQLRQIPK 370 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~-~~l~~iL~~i~~ 370 (431)
...+.++.|.+++.|.........+.|||.+| +|||.++.-. +-+-+.+.. -.+.++. +..+. ..|.+++. .+
T Consensus 292 ~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~-~~e~i~~~~-~g~~~~~-~~~~~a~~i~~l~~--~~ 365 (392)
T cd03805 292 QKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG-PLETVVDGE-TGFLCEP-TPEEFAEAMLKLAN--DP 365 (392)
T ss_pred HHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC-cHHHhccCC-ceEEeCC-CHHHHHHHHHHHHh--Ch
Confidence 34577899999999876655577899999999 6777776422 112233433 2333443 32221 11344444 35
Q ss_pred HHHHHHHHHHHhh-hhceEec
Q 014048 371 ARWIEMWQRLKSI-SHYYEFQ 390 (431)
Q Consensus 371 ~~i~~Mr~~l~~v-~~~~~y~ 390 (431)
+...+|+++.++. ...|.|.
T Consensus 366 ~~~~~~~~~a~~~~~~~~s~~ 386 (392)
T cd03805 366 DLADRMGAAGRKRVKEKFSTE 386 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 6788888887764 4556554
No 32
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=89.74 E-value=0.87 Score=45.36 Aligned_cols=62 Identities=16% Similarity=0.147 Sum_probs=40.7
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeecccc
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEA 355 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~ 355 (431)
..+..+.++.+..++.|.-.+ .+..+.|||.+|| |||..+.-..+ +.+.=....+.++..+.
T Consensus 252 ~~~~~~~~~~ad~~v~ps~e~-~g~~~~Eama~G~-Pvi~~~~~~~~--e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 252 DEELRDLYARARAFLFPAEED-FGIVPVEAMASGT-PVIAYGKGGAL--ETVIDGVTGILFEEQTV 313 (351)
T ss_pred HHHHHHHHHhCCEEEECCcCC-CCchHHHHHHcCC-CEEEeCCCCCc--ceeeCCCCEEEeCCCCH
Confidence 345778899999999886533 4567899999997 99988753222 22322334556655443
No 33
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=89.44 E-value=0.51 Score=45.76 Aligned_cols=92 Identities=8% Similarity=0.046 Sum_probs=55.9
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCCH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIPK 370 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~~ 370 (431)
+..+.++.+..++.|......+..+.|||.+|| |||.++.-.. .+.+.- ..+.++..+..+.. .|.+++. .+
T Consensus 261 ~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~~--~e~~~~--~g~~~~~~~~~~l~~~i~~l~~--~~ 333 (365)
T cd03807 261 DVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGDN--AELVGD--TGFLVPPGDPEALAEAIEALLA--DP 333 (365)
T ss_pred cHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCCh--HHHhhc--CCEEeCCCCHHHHHHHHHHHHh--Ch
Confidence 456788999999999876666788999999996 7887764321 112211 34455544433211 1333333 34
Q ss_pred HHHHHHHHHHHhh-hhceEec
Q 014048 371 ARWIEMWQRLKSI-SHYYEFQ 390 (431)
Q Consensus 371 ~~i~~Mr~~l~~v-~~~~~y~ 390 (431)
++..+|.++..+. .+.|.|.
T Consensus 334 ~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 334 ALRQALGEAARERIEENFSIE 354 (365)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 6677777776654 4455554
No 34
>PLN02949 transferase, transferring glycosyl groups
Probab=89.34 E-value=2.7 Score=44.56 Aligned_cols=96 Identities=14% Similarity=0.176 Sum_probs=55.7
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCC-CCC-ceEEEeeccccCCcc-cHHHHHcC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEI-DYS-EFSVFFSIKEAGQPG-YMIDQLRQ 367 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~l-dw~-~fsV~i~~~d~~~~~-~l~~iL~~ 367 (431)
.+..+.+++|.+++.|.-+.....-+.|||.+||+||.-... =|-++++ +.. .-.-++. .++.+.. .|.++++.
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~g--Gp~~eIV~~~~~g~tG~l~-~~~~~la~ai~~ll~~ 422 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSA--GPKMDIVLDEDGQQTGFLA-TTVEEYADAILEVLRM 422 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCC--CCcceeeecCCCCcccccC-CCHHHHHHHHHHHHhC
Confidence 456677888998888765555678899999999887776432 1222222 111 0011111 1222201 13444443
Q ss_pred CCHHHHHHHHHHHHhhhhceEec
Q 014048 368 IPKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 368 i~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
++++..+|+++.++....|.+.
T Consensus 423 -~~~~r~~m~~~ar~~~~~FS~e 444 (463)
T PLN02949 423 -RETERLEIAAAARKRANRFSEQ 444 (463)
T ss_pred -CHHHHHHHHHHHHHHHHHcCHH
Confidence 5677888999888776665444
No 35
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=89.21 E-value=1.8 Score=44.36 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=86.4
Q ss_pred CCCCcccccCcccccCCC-CCC--CC-CCCCCCCcEEEEEeeccccCCChHHHHHHHHHHcCCCCeEE-ecCCC---CCC
Q 014048 217 SNLSKDVVAPYVHVVESF-TDD--NP-PDPFVARKTLLFFQGNTIRKDEGKVRAKLAKILTGYDDVHY-ERSAP---TTK 288 (431)
Q Consensus 217 ~~~~~DvviP~~~~~~~~-~~~--~~-~~~~~~R~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~~~~~-~~~~~---~~~ 288 (431)
++-+-|+.+||-...+.. ... .. ..-..+++.++.+..+.. ...-|.++++.+...-.+.+ .+|.. ...
T Consensus 163 yr~dSd~~~pygy~~~~~~~~~~~p~~~~~~~k~~~~aw~vSnc~---~~~~R~~~~~~L~k~l~iD~YG~c~~~~~~~~ 239 (372)
T KOG2619|consen 163 YRRDSDLFVPYGYLEKPEANPVLVPVNSILSAKTKLAAWLVSNCI---PRSARLDYYKELMKHLEIDSYGECLRKNANRD 239 (372)
T ss_pred EeccCCCCCccceEeecccCceecccccccccccceeeeeccccC---cchHHHHHHHHHHhhCceeeccccccccccCC
Confidence 556678888875433222 111 01 112345566667776654 35678888887766533322 23322 222
Q ss_pred ChhhHHhhccCccEEeccCC---CCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHH
Q 014048 289 SIKESTEGMRSSKFCLHPAG---DTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQL 365 (431)
Q Consensus 289 ~~~~~~~~l~~S~FCL~P~G---d~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL 365 (431)
......+.+..=+|-|.-.- ...-+--|+-|+.+|.|||+++......| ++ .+--|.| +|...+..+...|
T Consensus 240 ~~~~~~~~~s~YKFyLAfENS~c~DYVTEKfw~al~~gsVPVvlg~~n~e~f---vP-~~SfI~v--dDF~s~~ela~yl 313 (372)
T KOG2619|consen 240 PSDCLLETLSHYKFYLAFENSNCEDYVTEKFWNALDAGSVPVVLGPPNYENF---VP-PDSFIHV--DDFQSPQELAAYL 313 (372)
T ss_pred CCCcceeecccceEEEEecccCCcccccHHHHhhhhcCcccEEECCcccccc---CC-CcceEeh--hhcCCHHHHHHHH
Confidence 23346677888899988543 23447889999999999999998554443 33 3333444 5666544577777
Q ss_pred cCCCHH
Q 014048 366 RQIPKA 371 (431)
Q Consensus 366 ~~i~~~ 371 (431)
+.+...
T Consensus 314 k~L~~n 319 (372)
T KOG2619|consen 314 KKLDKN 319 (372)
T ss_pred HHhhcC
Confidence 777433
No 36
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=89.21 E-value=2.3 Score=41.89 Aligned_cols=91 Identities=14% Similarity=0.220 Sum_probs=52.6
Q ss_pred hhHHhhccCccEEeccCCC-CCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccc-cCCcccHHHHHcCC
Q 014048 291 KESTEGMRSSKFCLHPAGD-TPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKE-AGQPGYMIDQLRQI 368 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd-~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d-~~~~~~l~~iL~~i 368 (431)
.+..+.+.++..++.|.-. ......++|||.+|| |||.++.-. ..+.+.-. ...++..+ +.+ .|..+++
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~~--~~e~~~~~--g~~~~~~~~l~~--~i~~l~~-- 329 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNPF--NREVLGDK--AIYFKVGDDLAS--LLEELEA-- 329 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCCc--cceeecCC--eeEecCchHHHH--HHHHHHh--
Confidence 3456778888888887544 445678999999999 777776432 22333322 22333333 211 1333443
Q ss_pred CHHHHHHHHHHHHhhh-hceEec
Q 014048 369 PKARWIEMWQRLKSIS-HYYEFQ 390 (431)
Q Consensus 369 ~~~~i~~Mr~~l~~v~-~~~~y~ 390 (431)
.++.+.+|.++.++.. ..|.|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 330 DPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHH
Confidence 3467778888777654 345544
No 37
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=89.17 E-value=3 Score=40.51 Aligned_cols=92 Identities=11% Similarity=0.172 Sum_probs=57.6
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCc-ccHHHHHcCCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQP-GYMIDQLRQIP 369 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~-~~l~~iL~~i~ 369 (431)
.+..+.+++|.+.+.|......+..++|||.+|+ |||..+.-. +.+.+.-....+.++..+. +. ..|.+++. .
T Consensus 270 ~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~--~ 343 (374)
T cd03817 270 EELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAPG--LPDLVADGENGFLFPPGDE-ALAEALLRLLQ--D 343 (374)
T ss_pred HHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCCC--hhhheecCceeEEeCCCCH-HHHHHHHHHHh--C
Confidence 4577889999999999766556788999999986 555555322 2233333344455554442 20 11444443 3
Q ss_pred HHHHHHHHHHHHhhhhceE
Q 014048 370 KARWIEMWQRLKSISHYYE 388 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v~~~~~ 388 (431)
++..++|+++.++....+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 344 PELRRRLSKNAEESAEKFS 362 (374)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 5566788888888776644
No 38
>PRK10307 putative glycosyl transferase; Provisional
Probab=89.00 E-value=1.2 Score=45.62 Aligned_cols=95 Identities=6% Similarity=0.074 Sum_probs=59.4
Q ss_pred hhhHHhhccCccEEeccCCCCC----CchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHH
Q 014048 290 IKESTEGMRSSKFCLHPAGDTP----SSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQL 365 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~----~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL 365 (431)
.++..+.++.|..++.|.=.+. ....++|||.+| +|||.++.--....+.+. .-.+.++..|..+ +.+.|
T Consensus 294 ~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~---la~~i 367 (412)
T PRK10307 294 YDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQLVE--GIGVCVEPESVEA---LVAAI 367 (412)
T ss_pred HHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHHHh--CCcEEeCCCCHHH---HHHHH
Confidence 3456778889998888743221 234589999999 688887642222233444 3455566555443 54444
Q ss_pred cCC--CHHHHHHHHHHHHhh-hhceEec
Q 014048 366 RQI--PKARWIEMWQRLKSI-SHYYEFQ 390 (431)
Q Consensus 366 ~~i--~~~~i~~Mr~~l~~v-~~~~~y~ 390 (431)
..+ .++...+|+++.++. .++|.|.
T Consensus 368 ~~l~~~~~~~~~~~~~a~~~~~~~fs~~ 395 (412)
T PRK10307 368 AALARQALLRPKLGTVAREYAERTLDKE 395 (412)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence 433 467788898888874 4567766
No 39
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=88.82 E-value=3.1 Score=42.48 Aligned_cols=94 Identities=9% Similarity=0.060 Sum_probs=55.0
Q ss_pred hhHHhhccCccEEeccCCC-CCCchhHHHHHHhcceeEEEeCCcccCcCCCC-CCCceEEEeeccccCCcc-cHHHHHcC
Q 014048 291 KESTEGMRSSKFCLHPAGD-TPSSCRLFDAIVSHCVPVIVSDRIELPFEDEI-DYSEFSVFFSIKEAGQPG-YMIDQLRQ 367 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd-~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~l-dw~~fsV~i~~~d~~~~~-~l~~iL~~ 367 (431)
.+..+.++.|..++.|... ......++|||.+| +|||.++.--.| +.+ |-..--+.++..+..... .|..+|
T Consensus 268 ~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg~~--Eiv~~~~~G~~l~~~~d~~~la~~I~~ll-- 342 (380)
T PRK15484 268 EKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGGIT--EFVLEGITGYHLAEPMTSDSIISDINRTL-- 342 (380)
T ss_pred HHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCCcH--hhcccCCceEEEeCCCCHHHHHHHHHHHH--
Confidence 4567778999999999753 34467899999999 789988753322 222 222111233333432211 133333
Q ss_pred CCHHHHHHHHHHHHh-hhhceEec
Q 014048 368 IPKARWIEMWQRLKS-ISHYYEFQ 390 (431)
Q Consensus 368 i~~~~i~~Mr~~l~~-v~~~~~y~ 390 (431)
.+.+..+|.++.++ +.++|.|.
T Consensus 343 -~d~~~~~~~~~ar~~~~~~fsw~ 365 (380)
T PRK15484 343 -ADPELTQIAEQAKDFVFSKYSWE 365 (380)
T ss_pred -cCHHHHHHHHHHHHHHHHhCCHH
Confidence 33345677777765 45676665
No 40
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=88.21 E-value=3.5 Score=39.37 Aligned_cols=92 Identities=7% Similarity=0.040 Sum_probs=52.0
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCccc-HHHHHcCCC-
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGY-MIDQLRQIP- 369 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~-l~~iL~~i~- 369 (431)
+..+.+++|.++++|.-....+..+.|||.+||. ||.++.-. ..+.+.=....+.++..+...... +..++....
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~~--~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCPG--PREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCCC--hHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 3557889999999997555457789999999975 55554432 223333344555666555433100 122223222
Q ss_pred HHHHHHHHH-HHHhhhhc
Q 014048 370 KARWIEMWQ-RLKSISHY 386 (431)
Q Consensus 370 ~~~i~~Mr~-~l~~v~~~ 386 (431)
++...+|.+ +...+.++
T Consensus 333 ~~~~~~~~~~~~~~~~~~ 350 (353)
T cd03811 333 PELRERLAAAARERVARE 350 (353)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 455666666 44444443
No 41
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=87.43 E-value=3.7 Score=40.20 Aligned_cols=95 Identities=8% Similarity=-0.009 Sum_probs=56.2
Q ss_pred hhHHhhccCccEEeccCC--CCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcC
Q 014048 291 KESTEGMRSSKFCLHPAG--DTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQ 367 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~G--d~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~ 367 (431)
.+..+.++.+..++.|.- .......+.|||.+| +|||.++.-..+ +...+.......++..|..+.. .|.+++.
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g-~Pvi~~~~~~~~-~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~- 331 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFG-KPVISTEIGTGG-SYVNLHGVTGLVVPPGDPAALAEAIRRLLE- 331 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccchHHHHHHHcC-CCEEecCCCCch-hHHhhCCCceEEeCCCCHHHHHHHHHHHHH-
Confidence 346778888999998852 122356799999998 567776633221 1111123445555555543311 1333433
Q ss_pred CCHHHHHHHHHHHHhhh-hceEe
Q 014048 368 IPKARWIEMWQRLKSIS-HYYEF 389 (431)
Q Consensus 368 i~~~~i~~Mr~~l~~v~-~~~~y 389 (431)
.+++..+|+++.++.. ++|.+
T Consensus 332 -~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 332 -DPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred -CHHHHHHHHHHHHHHHHHhcch
Confidence 5788899999988764 44443
No 42
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=86.91 E-value=0.93 Score=36.20 Aligned_cols=72 Identities=11% Similarity=0.151 Sum_probs=41.5
Q ss_pred CchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEee-ccccCCcccHHHHHcCCCHHHHHHHHHHHHhhh-hceEe
Q 014048 312 SSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFS-IKEAGQPGYMIDQLRQIPKARWIEMWQRLKSIS-HYYEF 389 (431)
Q Consensus 312 ~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~-~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v~-~~~~y 389 (431)
.+.|+||+|.+|+..| ..+.-.+ ...++..+-.+.++ .+|+.+ .|...|+ .+++.++|.++..+.. .++.|
T Consensus 11 ~~~r~~E~~a~G~~vi-~~~~~~~--~~~~~~~~~~~~~~~~~el~~--~i~~ll~--~~~~~~~ia~~a~~~v~~~~t~ 83 (92)
T PF13524_consen 11 PNMRIFEAMACGTPVI-SDDSPGL--REIFEDGEHIITYNDPEELAE--KIEYLLE--NPEERRRIAKNARERVLKRHTW 83 (92)
T ss_pred CchHHHHHHHCCCeEE-ECChHHH--HHHcCCCCeEEEECCHHHHHH--HHHHHHC--CHHHHHHHHHHHHHHHHHhCCH
Confidence 4789999999998644 4433111 12234443445553 334332 1334444 7888999988887644 35555
Q ss_pred c
Q 014048 390 Q 390 (431)
Q Consensus 390 ~ 390 (431)
.
T Consensus 84 ~ 84 (92)
T PF13524_consen 84 E 84 (92)
T ss_pred H
Confidence 4
No 43
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=86.49 E-value=0.79 Score=46.00 Aligned_cols=95 Identities=15% Similarity=0.114 Sum_probs=59.2
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCCH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIPK 370 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~~ 370 (431)
+..+.++++...+.|.-.......+.|||.+|| |||..+--.-| .+.+.-.+-.+.++..+..+.. .|..+|. .+
T Consensus 271 ~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~-~~~v~~~~~G~lv~~~d~~~la~~i~~ll~--~~ 346 (372)
T cd04949 271 DLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP-SEIIEDGENGYLVPKGDIEALAEAIIELLN--DP 346 (372)
T ss_pred CHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc-HHHcccCCCceEeCCCcHHHHHHHHHHHHc--CH
Confidence 456778899999998754445678999999998 77776521111 1222223344555544433311 1444544 46
Q ss_pred HHHHHHHHHHHhhhhceEec
Q 014048 371 ARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 371 ~~i~~Mr~~l~~v~~~~~y~ 390 (431)
+.+.+|+++.++....|.+.
T Consensus 347 ~~~~~~~~~a~~~~~~~s~~ 366 (372)
T cd04949 347 KLLQKFSEAAYENAERYSEE 366 (372)
T ss_pred HHHHHHHHHHHHHHHHhhHH
Confidence 78899999988877766543
No 44
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=85.59 E-value=3.8 Score=42.43 Aligned_cols=89 Identities=13% Similarity=0.161 Sum_probs=52.9
Q ss_pred hhhHHhhccCccEEeccC----CCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHH
Q 014048 290 IKESTEGMRSSKFCLHPA----GDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQ 364 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~----Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~i 364 (431)
.+++.+.|+.|..++.|. |.+ ....++|||.+|+ |||.++.-..+ +++.-..-.+.++ +..+.. .|.++
T Consensus 305 ~~~~~~~l~~aDv~v~~~~~~~~~~-~p~~~~Eama~G~-PVI~s~~~~~~--eiv~~~~~G~lv~--d~~~la~~i~~l 378 (415)
T cd03816 305 AEDYPKLLASADLGVSLHTSSSGLD-LPMKVVDMFGCGL-PVCALDFKCID--ELVKHGENGLVFG--DSEELAEQLIDL 378 (415)
T ss_pred HHHHHHHHHhCCEEEEccccccccC-CcHHHHHHHHcCC-CEEEeCCCCHH--HHhcCCCCEEEEC--CHHHHHHHHHHH
Confidence 456777888888887542 333 3567999999998 99998753222 3332222233332 322211 14444
Q ss_pred HcCC-CHHHHHHHHHHHHhhh
Q 014048 365 LRQI-PKARWIEMWQRLKSIS 384 (431)
Q Consensus 365 L~~i-~~~~i~~Mr~~l~~v~ 384 (431)
|..- ++++..+|.++.++..
T Consensus 379 l~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 379 LSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HhcCCCHHHHHHHHHHHHHhh
Confidence 5531 2788899988887765
No 45
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=85.51 E-value=4.1 Score=42.82 Aligned_cols=95 Identities=16% Similarity=0.196 Sum_probs=54.4
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCC-----ceEEEeeccccCCcc-cHHHHH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYS-----EFSVFFSIKEAGQPG-YMIDQL 365 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~-----~fsV~i~~~d~~~~~-~l~~iL 365 (431)
...+.++.|.+++.|.-..+......|||.+||.||. ++.--++ +.+.|.+ .-.+.++..+..... .|.++|
T Consensus 358 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~gg~~-e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l 435 (473)
T TIGR02095 358 LAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTGGLA-DTVVDGDPEAESGTGFLFEEYDPGALLAALSRAL 435 (473)
T ss_pred HHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCCCcc-ceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 3557889999999998777778889999999997665 4332221 1122221 344555555543311 133333
Q ss_pred cCC--CHHHHHHHHHHHHhhhhceEec
Q 014048 366 RQI--PKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 366 ~~i--~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
... .++...+|.++.. ...|.|.
T Consensus 436 ~~~~~~~~~~~~~~~~~~--~~~fsw~ 460 (473)
T TIGR02095 436 RLYRQDPSLWEALQKNAM--SQDFSWD 460 (473)
T ss_pred HHHhcCHHHHHHHHHHHh--ccCCCcH
Confidence 311 4566777776653 2444444
No 46
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=85.16 E-value=2.3 Score=43.47 Aligned_cols=91 Identities=12% Similarity=0.146 Sum_probs=55.3
Q ss_pred hHHhhccCccEEeccC--CCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCC
Q 014048 292 ESTEGMRSSKFCLHPA--GDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQI 368 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~--Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i 368 (431)
+..+.++.+..++.|. |.| ....+.|||.+|+ |||.++.- .+.+..-..-.+.++ .+..+.. .|.++|.
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG-~~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~-- 361 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARG-IQNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLA-- 361 (397)
T ss_pred CHHHHHHhCCEEEecccccCC-cccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHc--
Confidence 3566788899888884 444 3567999999997 99988742 111111122344454 3433211 1444444
Q ss_pred CHHHHHHHHHHHHhh-hhceEec
Q 014048 369 PKARWIEMWQRLKSI-SHYYEFQ 390 (431)
Q Consensus 369 ~~~~i~~Mr~~l~~v-~~~~~y~ 390 (431)
.++...+|.++.++. .+.|.|.
T Consensus 362 ~~~~~~~~~~~ar~~v~~~fsw~ 384 (397)
T TIGR03087 362 NPAEREELGQAARRRVLQHYHWP 384 (397)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHH
Confidence 467788888888764 4677666
No 47
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=83.77 E-value=3.7 Score=41.35 Aligned_cols=91 Identities=12% Similarity=0.042 Sum_probs=50.0
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCCH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIPK 370 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~~ 370 (431)
.+.+.++.+..++.|.-.......+.|||++| +|||.++...-+- +++.-..--+.++..|..+.. .|.++|.+-..
T Consensus 250 ~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~~~~g~~-eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~ 327 (359)
T PRK09922 250 VVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSDCMSGPR-DIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK 327 (359)
T ss_pred HHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeCCCCChH-HHccCCCceEEECCCCHHHHHHHHHHHHhCccc
Confidence 34556777888888876555678999999999 6888887222221 233222333444555544311 13444443321
Q ss_pred HHHHHHHHHHHhhh
Q 014048 371 ARWIEMWQRLKSIS 384 (431)
Q Consensus 371 ~~i~~Mr~~l~~v~ 384 (431)
....++++++++..
T Consensus 328 ~~~~~~~~~~~~~~ 341 (359)
T PRK09922 328 YQHDAIPNSIERFY 341 (359)
T ss_pred CCHHHHHHHHHHhh
Confidence 12345555555443
No 48
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=83.64 E-value=1.9 Score=42.01 Aligned_cols=41 Identities=24% Similarity=0.316 Sum_probs=32.6
Q ss_pred hHHhhccCccEEeccCC-CCCCchhHHHHHHhcceeEEEeCCc
Q 014048 292 ESTEGMRSSKFCLHPAG-DTPSSCRLFDAIVSHCVPVIVSDRI 333 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~G-d~~~s~Rl~DAi~~GCIPVii~d~~ 333 (431)
+..+.++.+.+++.|.- .......++|||.+|+ |||.+|.-
T Consensus 236 ~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~ 277 (335)
T cd03802 236 EKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRG 277 (335)
T ss_pred HHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCC
Confidence 45678899999999964 2334678999999997 99998764
No 49
>PRK00654 glgA glycogen synthase; Provisional
Probab=83.18 E-value=7.1 Score=41.13 Aligned_cols=38 Identities=13% Similarity=0.189 Sum_probs=31.7
Q ss_pred HHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEe
Q 014048 293 STEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVS 330 (431)
Q Consensus 293 ~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~ 330 (431)
....++.|.+++.|.=..+......|||.+||+||+-.
T Consensus 350 ~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~ 387 (466)
T PRK00654 350 AHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRR 387 (466)
T ss_pred HHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeC
Confidence 44678999999999777777888999999999887743
No 50
>PRK14098 glycogen synthase; Provisional
Probab=82.99 E-value=7.3 Score=41.53 Aligned_cols=40 Identities=13% Similarity=0.036 Sum_probs=33.9
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeC
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSD 331 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d 331 (431)
...+.++.|.+++.|.=..+......|||.+||+||+...
T Consensus 374 ~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~ 413 (489)
T PRK14098 374 FFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAG 413 (489)
T ss_pred HHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecC
Confidence 4567889999999998777778889999999999998654
No 51
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=82.48 E-value=10 Score=36.98 Aligned_cols=95 Identities=12% Similarity=0.109 Sum_probs=56.0
Q ss_pred hhHHhhccCccEEeccCCC------CCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHH
Q 014048 291 KESTEGMRSSKFCLHPAGD------TPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMID 363 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd------~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~ 363 (431)
.+..+.++++.+++.|... ......++|||.+||-.| .++.-. ..+.+.=..-...+++.+..+.. .|.+
T Consensus 247 ~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi-~~~~~~--~~~~i~~~~~g~~~~~~~~~~l~~~i~~ 323 (355)
T cd03799 247 EEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVI-STDVSG--IPELVEDGETGLLVPPGDPEALADAIER 323 (355)
T ss_pred HHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEE-ecCCCC--cchhhhCCCceEEeCCCCHHHHHHHHHH
Confidence 4577888999999998654 334788999999997654 444322 22333323234555544433311 1334
Q ss_pred HHcCCCHHHHHHHHHHHHhhh-hceEec
Q 014048 364 QLRQIPKARWIEMWQRLKSIS-HYYEFQ 390 (431)
Q Consensus 364 iL~~i~~~~i~~Mr~~l~~v~-~~~~y~ 390 (431)
++. .+++..+|.++.++.. ..|.+.
T Consensus 324 ~~~--~~~~~~~~~~~a~~~~~~~~s~~ 349 (355)
T cd03799 324 LLD--DPELRREMGEAGRARVEEEFDIR 349 (355)
T ss_pred HHh--CHHHHHHHHHHHHHHHHHhcCHH
Confidence 443 4666788888877643 445443
No 52
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=81.67 E-value=3.4 Score=43.63 Aligned_cols=89 Identities=9% Similarity=0.036 Sum_probs=54.6
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCC------CceEEEeeccccCCcc-cHHHH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDY------SEFSVFFSIKEAGQPG-YMIDQ 364 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw------~~fsV~i~~~d~~~~~-~l~~i 364 (431)
+..+.|..+...+.|.-.......+.|||.+|| |||.++.--. .+.+.- ....+.++..|..+.. .|.++
T Consensus 363 ~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~~--~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~l 439 (475)
T cd03813 363 NVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGSC--RELIEGADDEALGPAGEVVPPADPEALARAILRL 439 (475)
T ss_pred cHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCCh--HHHhcCCcccccCCceEEECCCCHHHHHHHHHHH
Confidence 456677888888887643334678999999998 8888764221 122211 2345566655544311 14444
Q ss_pred HcCCCHHHHHHHHHHHHhhhh
Q 014048 365 LRQIPKARWIEMWQRLKSISH 385 (431)
Q Consensus 365 L~~i~~~~i~~Mr~~l~~v~~ 385 (431)
|. +++...+|.++.++...
T Consensus 440 l~--~~~~~~~~~~~a~~~v~ 458 (475)
T cd03813 440 LK--DPELRRAMGEAGRKRVE 458 (475)
T ss_pred hc--CHHHHHHHHHHHHHHHH
Confidence 44 57788888888876443
No 53
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=79.90 E-value=4.6 Score=39.66 Aligned_cols=90 Identities=10% Similarity=0.007 Sum_probs=56.4
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCC
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQI 368 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i 368 (431)
.....+.|+.|.+.+.|......+..+.|||.+|| |||..+.- +..+.+.-.+-.+.++..+..+.. .|.+++.
T Consensus 255 ~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~-PvI~~~~~--~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~-- 329 (365)
T cd03825 255 DESLALIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDVG--GIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLA-- 329 (365)
T ss_pred HHHHHHHHHhCCEEEeccccccccHHHHHHHhcCC-CEEEecCC--CChhheeCCCceEEeCCCCHHHHHHHHHHHHh--
Confidence 34566789999999999876667889999999997 56665532 222333323345555544433211 1344443
Q ss_pred CHHHHHHHHHHHHhhh
Q 014048 369 PKARWIEMWQRLKSIS 384 (431)
Q Consensus 369 ~~~~i~~Mr~~l~~v~ 384 (431)
.+++..+|.++.++..
T Consensus 330 ~~~~~~~~~~~~~~~~ 345 (365)
T cd03825 330 DPDEREELGEAARELA 345 (365)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 4666888888877654
No 54
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=77.76 E-value=2.9 Score=43.57 Aligned_cols=85 Identities=15% Similarity=0.231 Sum_probs=50.6
Q ss_pred cEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCCHHHHHHHHHH
Q 014048 301 KFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIPKARWIEMWQR 379 (431)
Q Consensus 301 ~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~~~~i~~Mr~~ 379 (431)
...+.|.-.......+.|||.+|| |||.++.-- ..++++-.+-.+.++..|..... .|.++|. .+++..+|.++
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~gg--~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~--~~~~~~~~~~~ 416 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGL-PIVATDDGG--PRDIIANCRNGLLVDVLDLEAIASALEDALS--DSSQWQLWSRN 416 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCC-CEEEeCCCC--cHHHhcCCCcEEEeCCCCHHHHHHHHHHHHh--CHHHHHHHHHH
Confidence 344455433444678999999999 999987532 22334333445566665543311 1344444 46677778777
Q ss_pred HHh-hhhceEec
Q 014048 380 LKS-ISHYYEFQ 390 (431)
Q Consensus 380 l~~-v~~~~~y~ 390 (431)
.++ +.++|.|.
T Consensus 417 a~~~~~~~fsw~ 428 (439)
T TIGR02472 417 GIEGVRRHYSWD 428 (439)
T ss_pred HHHHHHHhCCHH
Confidence 765 55667665
No 55
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=77.06 E-value=11 Score=36.92 Aligned_cols=40 Identities=23% Similarity=0.182 Sum_probs=31.7
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCC
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDR 332 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~ 332 (431)
+..+.+++|.++++|.-.......+.|||.+||- ||.++.
T Consensus 259 ~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~P-vI~s~~ 298 (358)
T cd03812 259 DVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLP-CILSDT 298 (358)
T ss_pred CHHHHHHhcCEEEecccccCCCHHHHHHHHhCCC-EEEEcC
Confidence 4667889999999997666668899999999985 455553
No 56
>PRK14099 glycogen synthase; Provisional
Probab=76.66 E-value=5 Score=42.75 Aligned_cols=92 Identities=17% Similarity=0.198 Sum_probs=55.0
Q ss_pred hHHhhc-cCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCC--------ceEEEeeccccCCcccHH
Q 014048 292 ESTEGM-RSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYS--------EFSVFFSIKEAGQPGYMI 362 (431)
Q Consensus 292 ~~~~~l-~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~--------~fsV~i~~~d~~~~~~l~ 362 (431)
+....+ +.|.+.+.|.=..+......|||.+||+||+ ++---++ +.+.|.. .-.+.++..|... +.
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~---La 435 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADA---LA 435 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCCcc-ceeecccccccccCCCceEEeCCCCHHH---HH
Confidence 344555 5688888887777778899999999999988 4321111 1122331 2355566555433 44
Q ss_pred HHHcC----C-CHHHHHHHHHHHHhhhhceEec
Q 014048 363 DQLRQ----I-PKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 363 ~iL~~----i-~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
+.|.. + .++...+|+++.. ...|.|.
T Consensus 436 ~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~ 466 (485)
T PRK14099 436 AALRKTAALFADPVAWRRLQRNGM--TTDVSWR 466 (485)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhh--hhcCChH
Confidence 43332 2 4677788887764 3455555
No 57
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=75.48 E-value=20 Score=36.70 Aligned_cols=91 Identities=9% Similarity=0.167 Sum_probs=58.4
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeC-----CcccCcCCCCCCCceEEEeeccccCCcccHHHHH
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSD-----RIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQL 365 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d-----~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL 365 (431)
++..+++.++++.+.-.=+........|+|++|-|||.=.. ++..|++.. . .=|..+++..-...+.+|+
T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~----~-tGFla~t~~EYaE~iLkIv 422 (465)
T KOG1387|consen 348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGE----T-TGFLAPTDEEYAEAILKIV 422 (465)
T ss_pred HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCc----c-ceeecCChHHHHHHHHHHH
Confidence 45678899999999877777778999999999999987543 256666432 1 1122222211011245555
Q ss_pred cCCCHHHHHHHHHHHHhhhhce
Q 014048 366 RQIPKARWIEMWQRLKSISHYY 387 (431)
Q Consensus 366 ~~i~~~~i~~Mr~~l~~v~~~~ 387 (431)
.. +.++...||++.++-..+|
T Consensus 423 ~~-~~~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 423 KL-NYDERNMMRRNARKSLARF 443 (465)
T ss_pred Hc-CHHHHHHHHHHHHHHHHHh
Confidence 43 5666888888888766554
No 58
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=74.52 E-value=17 Score=37.88 Aligned_cols=39 Identities=18% Similarity=0.197 Sum_probs=31.8
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEe
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVS 330 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~ 330 (431)
...+.++.+.+.+.|.-..+......|||.+||.||.-.
T Consensus 363 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~ 401 (476)
T cd03791 363 LAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRA 401 (476)
T ss_pred HHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECc
Confidence 345678899999999877777888999999999887543
No 59
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=73.37 E-value=12 Score=38.52 Aligned_cols=93 Identities=10% Similarity=0.135 Sum_probs=51.4
Q ss_pred hHHhhccCc--cEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeecc-ccCCcc-cHHHHHcC
Q 014048 292 ESTEGMRSS--KFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIK-EAGQPG-YMIDQLRQ 367 (431)
Q Consensus 292 ~~~~~l~~S--~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~-d~~~~~-~l~~iL~~ 367 (431)
+..+.++.+ ...+.|.-.......+.|||.+|+ |||.++---.| +.++-..--+.++.. +..+.. .|.+++.
T Consensus 301 e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vgg~~--e~i~~~~~G~l~~~~~~~~~la~~I~~ll~- 376 (407)
T cd04946 301 EVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVGGTP--EIVDNGGNGLLLSKDPTPNELVSSLSKFID- 376 (407)
T ss_pred HHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCCCcH--HHhcCCCcEEEeCCCCCHHHHHHHHHHHHh-
Confidence 344556543 233334333234678999999995 99988743332 333323234444432 322211 1444444
Q ss_pred CCHHHHHHHHHHHHhhh-hceEe
Q 014048 368 IPKARWIEMWQRLKSIS-HYYEF 389 (431)
Q Consensus 368 i~~~~i~~Mr~~l~~v~-~~~~y 389 (431)
++++..+|+++.++.+ ++|-+
T Consensus 377 -~~~~~~~m~~~ar~~~~~~f~~ 398 (407)
T cd04946 377 -NEEEYQTMREKAREKWEENFNA 398 (407)
T ss_pred -CHHHHHHHHHHHHHHHHHHcCH
Confidence 6889999999988765 44433
No 60
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=72.74 E-value=15 Score=39.90 Aligned_cols=61 Identities=8% Similarity=-0.048 Sum_probs=40.5
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeecccc
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEA 355 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~ 355 (431)
+..+.|+.+...+.|.=.......+.|||.+|| |||.++.--.| +.+.-..--+.++..|.
T Consensus 465 Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdvGG~~--EiV~dG~nG~LVp~~D~ 525 (578)
T PRK15490 465 DVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPAGGSA--ECFIEGVSGFILDDAQT 525 (578)
T ss_pred hHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCCCCcH--HHcccCCcEEEECCCCh
Confidence 456678888888888655556789999999998 99988753222 22322344455565553
No 61
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=72.66 E-value=19 Score=36.67 Aligned_cols=95 Identities=6% Similarity=0.127 Sum_probs=53.5
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCc-ccHHHHHcCCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQP-GYMIDQLRQIP 369 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~-~~l~~iL~~i~ 369 (431)
.+..+.++.+..++.|.-.......+.|||.+|| |||.++.-..+ +.+.- ...+.++. +..+. ..|.++|...
T Consensus 261 ~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg~~--e~i~~-~~~~~~~~-~~~~l~~~l~~~l~~~- 334 (398)
T cd03796 261 ERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGGIP--EVLPP-DMILLAEP-DVESIVRKLEEAISIL- 334 (398)
T ss_pred HHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCCch--hheeC-CceeecCC-CHHHHHHHHHHHHhCh-
Confidence 4677788889998888644445678999999997 56666543322 33332 23344443 32220 1244555432
Q ss_pred HHHHHHHHHHHHhhhhceEecC
Q 014048 370 KARWIEMWQRLKSISHYYEFQY 391 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v~~~~~y~~ 391 (431)
.++...+++...++..+|.|..
T Consensus 335 ~~~~~~~~~~~~~~~~~fs~~~ 356 (398)
T cd03796 335 RTGKHDPWSFHNRVKKMYSWED 356 (398)
T ss_pred hhhhhHHHHHHHHHHhhCCHHH
Confidence 2232333444455777776663
No 62
>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A.
Probab=72.61 E-value=0.94 Score=23.59 Aligned_cols=12 Identities=8% Similarity=-0.111 Sum_probs=9.7
Q ss_pred Hhhccccccccc
Q 014048 24 VITYSVFIGTVD 35 (431)
Q Consensus 24 ~~~~~~~~g~~~ 35 (431)
|.|.|+|.|..|
T Consensus 2 C~C~~G~~G~~C 13 (13)
T PF12661_consen 2 CQCPPGWTGPNC 13 (13)
T ss_dssp EEE-TTEETTTT
T ss_pred ccCcCCCcCCCC
Confidence 789999999876
No 63
>PHA01630 putative group 1 glycosyl transferase
Probab=72.01 E-value=10 Score=38.34 Aligned_cols=41 Identities=10% Similarity=0.164 Sum_probs=31.4
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDR 332 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~ 332 (431)
.+..+.++.+..++.|.-......-+.|||.+|| |||.++.
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~ 241 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEK 241 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCC
Confidence 4567788999999998654445677999999997 5666653
No 64
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=67.32 E-value=23 Score=36.29 Aligned_cols=84 Identities=12% Similarity=0.158 Sum_probs=50.0
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCC-----CCceEEEeeccccCCc-ccHHHHH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEID-----YSEFSVFFSIKEAGQP-GYMIDQL 365 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ld-----w~~fsV~i~~~d~~~~-~~l~~iL 365 (431)
+..+.|+.|.+++..+| ...+.|||.+| +|||+.+.. |-++..+ =..+.+.+. +..+. ..|.++|
T Consensus 266 ~~~~~~~~aDl~I~k~g----g~tl~EA~a~G-~PvI~~~~~--pgqe~~N~~~~~~~G~g~~~~--~~~~l~~~i~~ll 336 (391)
T PRK13608 266 HMNEWMASSQLMITKPG----GITISEGLARC-IPMIFLNPA--PGQELENALYFEEKGFGKIAD--TPEEAIKIVASLT 336 (391)
T ss_pred hHHHHHHhhhEEEeCCc----hHHHHHHHHhC-CCEEECCCC--CCcchhHHHHHHhCCcEEEeC--CHHHHHHHHHHHh
Confidence 45678899999887554 23589999999 588887632 3222211 123444432 21120 1133444
Q ss_pred cCCCHHHHHHHHHHHHhhhhc
Q 014048 366 RQIPKARWIEMWQRLKSISHY 386 (431)
Q Consensus 366 ~~i~~~~i~~Mr~~l~~v~~~ 386 (431)
. .++++.+|+++..+..+.
T Consensus 337 ~--~~~~~~~m~~~~~~~~~~ 355 (391)
T PRK13608 337 N--GNEQLTNMISTMEQDKIK 355 (391)
T ss_pred c--CHHHHHHHHHHHHHhcCC
Confidence 3 578888999988886553
No 65
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=66.39 E-value=58 Score=34.90 Aligned_cols=92 Identities=11% Similarity=0.055 Sum_probs=51.4
Q ss_pred HHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCC-cccCcCCCCC--CCceEEEee--ccc----cCCcc-cHH
Q 014048 293 STEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDR-IELPFEDEID--YSEFSVFFS--IKE----AGQPG-YMI 362 (431)
Q Consensus 293 ~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~-~~lPf~~~ld--w~~fsV~i~--~~d----~~~~~-~l~ 362 (431)
..+.++.+.-++.|.=.......+.|||.+|| |||..|- .-.| +.|. -+.+.|-.+ +.+ +.... .|.
T Consensus 386 ~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~~G~~--eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~ 462 (500)
T TIGR02918 386 LSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVNYGNP--TFIEDNKNGYLIPIDEEEDDEDQIITALAEKIV 462 (500)
T ss_pred HHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCCCCCH--HHccCCCCEEEEeCCccccchhHHHHHHHHHHH
Confidence 44566666666666533335788999999996 6776652 2221 2222 233444322 111 11100 133
Q ss_pred HHHcCCCHHHHHHHHHHHHhhhhceEec
Q 014048 363 DQLRQIPKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 363 ~iL~~i~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
.+| .+++..+|.++..+..+.|.+.
T Consensus 463 ~ll---~~~~~~~~~~~a~~~a~~fs~~ 487 (500)
T TIGR02918 463 EYF---NSNDIDAFHEYSYQIAEGFLTA 487 (500)
T ss_pred HHh---ChHHHHHHHHHHHHHHHhcCHH
Confidence 444 4667899999999888776554
No 66
>PLN02939 transferase, transferring glycosyl groups
Probab=65.83 E-value=23 Score=40.85 Aligned_cols=93 Identities=12% Similarity=0.160 Sum_probs=54.7
Q ss_pred HhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCC--------ceEEEeeccccCCc-ccHHHH
Q 014048 294 TEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYS--------EFSVFFSIKEAGQP-GYMIDQ 364 (431)
Q Consensus 294 ~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~--------~fsV~i~~~d~~~~-~~l~~i 364 (431)
...++.|.+.+.|.=..+......+||.+||+||+...+= ++ +-+.|++ .-.+.++..+.... ..|...
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-L~-DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA 928 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-LN-DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA 928 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-Cc-ceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence 3578899999999777778889999999999998764321 11 1122221 12334444443220 013333
Q ss_pred HcCC--CHHHHHHHHHHHHhhhhceEec
Q 014048 365 LRQI--PKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 365 L~~i--~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
|..+ .++.+.+|+++. +...|.|.
T Consensus 929 L~~~~~dpe~~~~L~~~a--m~~dFSWe 954 (977)
T PLN02939 929 FNYYKRKPEVWKQLVQKD--MNIDFSWD 954 (977)
T ss_pred HHHhccCHHHHHHHHHHH--HHhcCCHH
Confidence 3322 477788887754 33556665
No 67
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=62.85 E-value=47 Score=29.54 Aligned_cols=40 Identities=13% Similarity=0.066 Sum_probs=30.4
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCC
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDR 332 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~ 332 (431)
.....++.|..++.|......+..++|||.+|+- ||.++.
T Consensus 174 ~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~p-vi~s~~ 213 (229)
T cd01635 174 LLALLLAAADVFVLPSLREGFGLVVLEAMACGLP-VIATDV 213 (229)
T ss_pred HHHHHhhcCCEEEecccccCcChHHHHHHhCCCC-EEEcCC
Confidence 3445555699999998877778999999999864 555543
No 68
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=62.13 E-value=32 Score=40.25 Aligned_cols=93 Identities=14% Similarity=0.158 Sum_probs=57.2
Q ss_pred HHhhccCc----cEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcC
Q 014048 293 STEGMRSS----KFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQ 367 (431)
Q Consensus 293 ~~~~l~~S----~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~ 367 (431)
..+.++.+ ..++.|.=..+...-+.|||.+| +|||.++.-- ..+++.-..--+.++..|..... .|..+|.
T Consensus 561 vp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG-lPVVASdvGG--~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~- 636 (1050)
T TIGR02468 561 VPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG-LPMVATKNGG--PVDIHRVLDNGLLVDPHDQQAIADALLKLVA- 636 (1050)
T ss_pred HHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC-CCEEEeCCCC--cHHHhccCCcEEEECCCCHHHHHHHHHHHhh-
Confidence 34445444 24445654455678899999999 5999987532 22333334456667766643311 1334443
Q ss_pred CCHHHHHHHHHHHHhhhhceEec
Q 014048 368 IPKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 368 i~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
.++...+|.++.++..+.|.|.
T Consensus 637 -Dpelr~~m~~~gr~~v~~FSWe 658 (1050)
T TIGR02468 637 -DKQLWAECRQNGLKNIHLFSWP 658 (1050)
T ss_pred -CHHHHHHHHHHHHHHHHHCCHH
Confidence 5777899999988877776665
No 69
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=61.07 E-value=47 Score=33.77 Aligned_cols=81 Identities=17% Similarity=0.286 Sum_probs=46.4
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCC------CCCCceEEEeeccccCCcc-cHHHH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDE------IDYSEFSVFFSIKEAGQPG-YMIDQ 364 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~------ldw~~fsV~i~~~d~~~~~-~l~~i 364 (431)
+..+.|+.|...+.++|. ..+.|||.+|+ |||+.+.. |-++. ++ ....+.+ .+..... .|.++
T Consensus 275 ~~~~l~~aaDv~V~~~g~----~ti~EAma~g~-PvI~~~~~--pgqe~gn~~~i~~-~g~g~~~--~~~~~la~~i~~l 344 (382)
T PLN02605 275 NMEEWMGACDCIITKAGP----GTIAEALIRGL-PIILNGYI--PGQEEGNVPYVVD-NGFGAFS--ESPKEIARIVAEW 344 (382)
T ss_pred cHHHHHHhCCEEEECCCc----chHHHHHHcCC-CEEEecCC--CccchhhHHHHHh-CCceeec--CCHHHHHHHHHHH
Confidence 467788899988887762 24899999995 77776632 32221 22 3344443 2221100 13334
Q ss_pred HcCCCHHHHHHHHHHHHhh
Q 014048 365 LRQIPKARWIEMWQRLKSI 383 (431)
Q Consensus 365 L~~i~~~~i~~Mr~~l~~v 383 (431)
|.. .++...+|+++.++.
T Consensus 345 l~~-~~~~~~~m~~~~~~~ 362 (382)
T PLN02605 345 FGD-KSDELEAMSENALKL 362 (382)
T ss_pred HcC-CHHHHHHHHHHHHHh
Confidence 442 267777888776654
No 70
>PLN00142 sucrose synthase
Probab=59.60 E-value=46 Score=37.92 Aligned_cols=94 Identities=10% Similarity=0.072 Sum_probs=54.6
Q ss_pred hhccC-ccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcC--CCH
Q 014048 295 EGMRS-SKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQ--IPK 370 (431)
Q Consensus 295 ~~l~~-S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~--i~~ 370 (431)
..++. +...++|.=..+....+.|||.+|+ |||.++.--.+ +.+.-..--+.|+..|..... .|.+.|.. -.+
T Consensus 661 r~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG~~--EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp 737 (815)
T PLN00142 661 RYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGGPA--EIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDP 737 (815)
T ss_pred HHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCCHH--HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCH
Confidence 33443 3445567555566888999999996 77777642222 223223445566655543311 13333332 267
Q ss_pred HHHHHHHHHHH-hhhhceEecC
Q 014048 371 ARWIEMWQRLK-SISHYYEFQY 391 (431)
Q Consensus 371 ~~i~~Mr~~l~-~v~~~~~y~~ 391 (431)
+...+|.++.+ ++..+|.|..
T Consensus 738 ~lr~~mg~~Ar~rv~e~FSWe~ 759 (815)
T PLN00142 738 SYWNKISDAGLQRIYECYTWKI 759 (815)
T ss_pred HHHHHHHHHHHHHHHHhCCHHH
Confidence 78888888865 4667888774
No 71
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=59.01 E-value=10 Score=39.13 Aligned_cols=107 Identities=9% Similarity=0.010 Sum_probs=60.9
Q ss_pred hHHhhccCccEEeccCCC-CCCchhHHHHHHhcceeEEEeCCcc-cC--cCCCCCCCceEEEeeccccCCcc-cHHHHHc
Q 014048 292 ESTEGMRSSKFCLHPAGD-TPSSCRLFDAIVSHCVPVIVSDRIE-LP--FEDEIDYSEFSVFFSIKEAGQPG-YMIDQLR 366 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd-~~~s~Rl~DAi~~GCIPVii~d~~~-lP--f~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~ 366 (431)
+..+.++.|..++++... ......+.|||.+|| |||.++... .+ .+. +.-..+.+.+ .|..+.. .|..+|.
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~~~~e~~~~-~~~~g~~~~~--~d~~~La~~l~~ll~ 387 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTFNFKEIFER-LLQAGAAIQV--EDAEDLAKAVTYLLT 387 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCccCHHHHHHH-HHHCCCeEEE--CCHHHHHHHHHHHhc
Confidence 466778888877665322 112445999999995 888876531 11 111 1112344432 2322211 1333433
Q ss_pred CCCHHHHHHHHHHHHhhhhceEecCCCCCCCHHHHHHHHHHhhhhh
Q 014048 367 QIPKARWIEMWQRLKSISHYYEFQYPPKKEDAVNMVWRQVKNKIPG 412 (431)
Q Consensus 367 ~i~~~~i~~Mr~~l~~v~~~~~y~~p~~~~DAf~~~~~~l~~R~~~ 412 (431)
.++...+|.++.++..... .+|.+-+++.+..-++.
T Consensus 388 --~~~~~~~m~~~a~~~~~~~--------~~~~~~~~~~l~~~l~~ 423 (425)
T PRK05749 388 --DPDARQAYGEAGVAFLKQN--------QGALQRTLQLLEPYLPP 423 (425)
T ss_pred --CHHHHHHHHHHHHHHHHhC--------ccHHHHHHHHHHHhccc
Confidence 5777888888888766442 37788888777654443
No 72
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=58.53 E-value=11 Score=37.35 Aligned_cols=84 Identities=12% Similarity=0.092 Sum_probs=48.1
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcC-----CCCCCCceEEEeeccc--cCCcc-cHHH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFE-----DEIDYSEFSVFFSIKE--AGQPG-YMID 363 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~-----~~ldw~~fsV~i~~~d--~~~~~-~l~~ 363 (431)
++.+.|..+..++.+.| ...++|||.+| +|||+.+.-.-+-+ +.+.-....+.++..+ ..+.. .|.+
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g-~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAG-VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcC-CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 56788999999998766 24699999999 57777532100000 1122234445565444 22211 1444
Q ss_pred HHcCCCHHHHHHHHHHHHh
Q 014048 364 QLRQIPKARWIEMWQRLKS 382 (431)
Q Consensus 364 iL~~i~~~~i~~Mr~~l~~ 382 (431)
.|. +++...+|.++.++
T Consensus 318 ll~--~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 318 LLL--DPANLEAMAEAARK 334 (348)
T ss_pred HHc--CHHHHHHHHHHHHh
Confidence 443 46777778777754
No 73
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=58.30 E-value=14 Score=40.39 Aligned_cols=98 Identities=16% Similarity=0.247 Sum_probs=62.4
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccC---cCCCCCCCceEEEeeccccCCc----c----c
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELP---FEDEIDYSEFSVFFSIKEAGQP----G----Y 360 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lP---f~~~ldw~~fsV~i~~~d~~~~----~----~ 360 (431)
.|.+.++.+.-++.|.-..+++.-..|||.+| +|||.++..-++ -+-+-+-.+..|.|...+.... . .
T Consensus 467 ~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~ 545 (590)
T cd03793 467 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQY 545 (590)
T ss_pred chHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHH
Confidence 47788999999999987777888899999999 699999875442 1212233356777763222110 0 1
Q ss_pred HHHHHcCCCHHHHHHHHHHHHhhhhceEecC
Q 014048 361 MIDQLRQIPKARWIEMWQRLKSISHYYEFQY 391 (431)
Q Consensus 361 l~~iL~~i~~~~i~~Mr~~l~~v~~~~~y~~ 391 (431)
|.+++ +-+..+....|....++...|.|..
T Consensus 546 m~~~~-~~~~r~~~~~r~~~~r~s~~f~W~~ 575 (590)
T cd03793 546 MYEFC-QLSRRQRIIQRNRTERLSDLLDWRN 575 (590)
T ss_pred HHHHh-CCcHHHHHHHHHHHHHHHHhCCHHH
Confidence 23334 2344555555555557888888874
No 74
>PHA01633 putative glycosyl transferase group 1
Probab=56.39 E-value=12 Score=38.00 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=34.3
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCc
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRI 333 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~ 333 (431)
.+..+.++.|.+-+.|.-......-+.|||.+|| |||.++--
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~~ 256 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLMP 256 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccCC
Confidence 4566788999988888766666888999999999 99988653
No 75
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=54.69 E-value=5.8 Score=33.43 Aligned_cols=56 Identities=21% Similarity=0.251 Sum_probs=32.0
Q ss_pred hhHHhhccCccEEeccCC-CCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEe
Q 014048 291 KESTEGMRSSKFCLHPAG-DTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFF 350 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~G-d~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i 350 (431)
.++.+.++++.+++.|.- +...+..++|++.+||- ||.++. +++....-..-.+.+
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~p-vi~~~~---~~~~~~~~~~~~~~~ 118 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKP-VIASDN---GAEGIVEEDGCGVLV 118 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---EEEEHH---HCHCHS---SEEEE-
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCC-EEECCc---chhhheeecCCeEEE
Confidence 368889999999999863 22357899999999975 555554 333333224455555
No 76
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=49.93 E-value=81 Score=30.71 Aligned_cols=137 Identities=14% Similarity=0.084 Sum_probs=82.0
Q ss_pred CCCCCCcEEEEEeeccccCCChHHHHHHHHHHcCCCC-e--EEec--CCCCCCC-------hhhHHhhccCccEEeccCC
Q 014048 241 DPFVARKTLLFFQGNTIRKDEGKVRAKLAKILTGYDD-V--HYER--SAPTTKS-------IKESTEGMRSSKFCLHPAG 308 (431)
Q Consensus 241 ~~~~~R~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~~-~--~~~~--~~~~~~~-------~~~~~~~l~~S~FCL~P~G 308 (431)
.+..+|.-.++|+|+... +..|+.|++...+.++ + .+.. ....|.. ...-++...+-+|=+...|
T Consensus 78 ~pW~~K~~~a~WRG~~~~---~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG 154 (256)
T smart00672 78 TKWSDKNAYAYWRGNPTV---ASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEG 154 (256)
T ss_pred CCccccCcCccccCCCCC---CcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCC
Confidence 366778889999998752 2289999998877764 2 3321 1111110 0112445567899999999
Q ss_pred CCCCchhHHHHHHhcceeEEEeCCcccCcC-CCCCCCceEEEeecc--c--cCCcccHHHHHcCCCHHHHHHHHHHHHhh
Q 014048 309 DTPSSCRLFDAIVSHCVPVIVSDRIELPFE-DEIDYSEFSVFFSIK--E--AGQPGYMIDQLRQIPKARWIEMWQRLKSI 383 (431)
Q Consensus 309 d~~~s~Rl~DAi~~GCIPVii~d~~~lPf~-~~ldw~~fsV~i~~~--d--~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v 383 (431)
.+. |-|+.=-|.++++++.....+..=|. ...+|.-|. -|..+ | +.+ ..+.+++ .+++.+++=++..+.
T Consensus 155 ~~~-S~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYv-Pv~~d~sd~~l~~---~i~~~~~-~~~~a~~Ia~~~~~~ 228 (256)
T smart00672 155 VAW-SVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYW-PIKSDLSCRELKE---AVDWGNE-HDKKAQEIGKRGSEF 228 (256)
T ss_pred ccc-hhhHHHHHhcCceEEEeCCchhHHHHhcccCccceE-EeeCCCchhhHHH---HHHHHHh-CHHHHHHHHHHHHHH
Confidence 885 78999999999998887755422222 234565553 22211 1 222 3333344 455666666666665
Q ss_pred hhc
Q 014048 384 SHY 386 (431)
Q Consensus 384 ~~~ 386 (431)
.+.
T Consensus 229 ~~~ 231 (256)
T smart00672 229 IQQ 231 (256)
T ss_pred HHH
Confidence 554
No 77
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=45.69 E-value=30 Score=34.51 Aligned_cols=100 Identities=11% Similarity=0.203 Sum_probs=55.8
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCC-ccc------CcCCCCCCCceEEEeeccccCCcccHHHH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDR-IEL------PFEDEIDYSEFSVFFSIKEAGQPGYMIDQ 364 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~-~~l------Pf~~~ldw~~fsV~i~~~d~~~~~~l~~i 364 (431)
++.+.|..+..++...| ...++|||.+|+ |||..+. ... .-+.+.+ ....+.++.+++ .+..|.+.
T Consensus 245 ~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~~-~~~~l~~~ 317 (357)
T PRK00726 245 DMAAAYAAADLVICRAG----ASTVAELAAAGL-PAILVPLPHAADDHQTANARALVD-AGAALLIPQSDL-TPEKLAEK 317 (357)
T ss_pred hHHHHHHhCCEEEECCC----HHHHHHHHHhCC-CEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEcccC-CHHHHHHH
Confidence 56788889999998766 245999999996 5555432 110 1112223 345666776653 12224333
Q ss_pred HcCC--CHHHHHHHHHHHHhhhhceEecCCCCCCCHHHHHHHHHHh
Q 014048 365 LRQI--PKARWIEMWQRLKSISHYYEFQYPPKKEDAVNMVWRQVKN 408 (431)
Q Consensus 365 L~~i--~~~~i~~Mr~~l~~v~~~~~y~~p~~~~DAf~~~~~~l~~ 408 (431)
++.+ .++...+|+++.++..+ .++.+.+.+.+..
T Consensus 318 i~~ll~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 353 (357)
T PRK00726 318 LLELLSDPERLEAMAEAARALGK----------PDAAERLADLIEE 353 (357)
T ss_pred HHHHHcCHHHHHHHHHHHHhcCC----------cCHHHHHHHHHHH
Confidence 3322 36667778887544322 3555555555544
No 78
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=44.33 E-value=74 Score=36.16 Aligned_cols=88 Identities=11% Similarity=0.112 Sum_probs=53.1
Q ss_pred cEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcC--CCHHHHHHHH
Q 014048 301 KFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQ--IPKARWIEMW 377 (431)
Q Consensus 301 ~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~--i~~~~i~~Mr 377 (431)
..+++|.=..+...-+.|||.+|+ |||.++.=-++ +.+.-..--+.|+..|..... .|.++|.. -.++.+.+|.
T Consensus 645 dVfV~PS~~EpFGLvvLEAMAcGl-PVVAT~~GG~~--EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms 721 (784)
T TIGR02470 645 GIFVQPALYEAFGLTVLEAMTCGL-PTFATRFGGPL--EIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKIS 721 (784)
T ss_pred cEEEECCcccCCCHHHHHHHHcCC-CEEEcCCCCHH--HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 456677666777899999999997 45555432111 222223445566665543311 13334322 2677888898
Q ss_pred HHHH-hhhhceEecC
Q 014048 378 QRLK-SISHYYEFQY 391 (431)
Q Consensus 378 ~~l~-~v~~~~~y~~ 391 (431)
++.+ ++..+|.|..
T Consensus 722 ~~a~~rV~~~FSW~~ 736 (784)
T TIGR02470 722 QGGLQRIYEKYTWKI 736 (784)
T ss_pred HHHHHHHHHhCCHHH
Confidence 8865 4678888874
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=37.06 E-value=31 Score=34.97 Aligned_cols=40 Identities=20% Similarity=0.282 Sum_probs=29.4
Q ss_pred hhHHhhccCccEEeccCCCC-----CCchhHHHHHHhcceeEEEeC
Q 014048 291 KESTEGMRSSKFCLHPAGDT-----PSSCRLFDAIVSHCVPVIVSD 331 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~-----~~s~Rl~DAi~~GCIPVii~d 331 (431)
++..+.++.+..|+.|--.. .....++|+|.+|+ |||..+
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~ 309 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP 309 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC
Confidence 45677889999999985432 12357999999995 787554
No 80
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=36.18 E-value=34 Score=36.09 Aligned_cols=91 Identities=11% Similarity=0.028 Sum_probs=55.5
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcce---eEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHH
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCV---PVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQL 365 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCI---PVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL 365 (431)
..+..+.++.|.-++.|.-......-..|||.+||= |||+++..-.+-. ..-.+.|+..|..... .|.++|
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-----~~~g~lv~p~d~~~la~ai~~~l 425 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-----LSGALLVNPYDIDEVADAIHRAL 425 (460)
T ss_pred HHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-----cCCCEEECCCCHHHHHHHHHHHH
Confidence 445677788888888875433346778999999996 5888875322211 1224566655544311 133344
Q ss_pred cCCCHHHHHHHHHHHHhhhhc
Q 014048 366 RQIPKARWIEMWQRLKSISHY 386 (431)
Q Consensus 366 ~~i~~~~i~~Mr~~l~~v~~~ 386 (431)
. .++++..+|.++.++....
T Consensus 426 ~-~~~~e~~~~~~~~~~~v~~ 445 (460)
T cd03788 426 T-MPLEERRERHRKLREYVRT 445 (460)
T ss_pred c-CCHHHHHHHHHHHHHHHHh
Confidence 3 3667777777766665544
No 81
>PF11119 DUF2633: Protein of unknown function (DUF2633); InterPro: IPR022576 This family is conserved largely in Proteobacteria. Several members are named as YfgG. The function is not known.
Probab=35.13 E-value=37 Score=25.49 Aligned_cols=28 Identities=25% Similarity=0.383 Sum_probs=17.2
Q ss_pred CchhhHHhhhhHHH-HHHHHHHH-HHhhcc
Q 014048 1 MEHREISKMFEKAI-LSLIFLLL-LVITYS 28 (431)
Q Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~ 28 (431)
|.+|.+..|---+. +||+++++ +|+.-.
T Consensus 1 ~r~k~~~~mtriVLLISfiIlfgRl~Y~~I 30 (59)
T PF11119_consen 1 MRRKKNSRMTRIVLLISFIILFGRLIYSAI 30 (59)
T ss_pred CCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666754443 77777777 665443
No 82
>KOG3185 consensus Translation initiation factor 6 (eIF-6) [Translation, ribosomal structure and biogenesis]
Probab=31.79 E-value=33 Score=31.99 Aligned_cols=32 Identities=19% Similarity=0.552 Sum_probs=28.2
Q ss_pred CccEEeccCCCCCCchhHHHHHHhcceeEEEe
Q 014048 299 SSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVS 330 (431)
Q Consensus 299 ~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~ 330 (431)
.-+|||+..|.+..=.+.|||=+.+.|||+-.
T Consensus 20 TNtYclva~ggS~nfys~~e~el~d~IPiV~t 51 (245)
T KOG3185|consen 20 TNTYCLVAIGGSENFYSAFEAELGDVIPIVHT 51 (245)
T ss_pred ccceEEEEecCchhHHHHHHHHhcCccceEEe
Confidence 56899999998887889999999999998754
No 83
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=31.67 E-value=89 Score=33.08 Aligned_cols=88 Identities=11% Similarity=0.052 Sum_probs=53.1
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhccee----EEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHH
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVP----VIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQ 364 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIP----Vii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~i 364 (431)
.++..+.++.+.-|+.|.=......-..|||++|+ | ||+++..-.+- .+. -.+.|+..|..... .|.++
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~-P~~g~vVlS~~~G~~~--~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD-PKDGVLILSEFAGAAQ--ELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccCccHHHHHHhcC-CCCceEEEeCCCCChH--HhC---CcEEECCCCHHHHHHHHHHH
Confidence 45677888999888887533334678999999996 8 88887542221 122 25666766654411 14444
Q ss_pred HcCCCHHHHHHHHHHHHhhh
Q 014048 365 LRQIPKARWIEMWQRLKSIS 384 (431)
Q Consensus 365 L~~i~~~~i~~Mr~~l~~v~ 384 (431)
|. .++++..++.+++++..
T Consensus 420 L~-~~~~er~~r~~~~~~~v 438 (456)
T TIGR02400 420 LT-MPLEEREERHRAMMDKL 438 (456)
T ss_pred Hc-CCHHHHHHHHHHHHHHH
Confidence 44 35665555555555443
No 84
>PLN02275 transferase, transferring glycosyl groups
Probab=26.75 E-value=1.9e+02 Score=29.13 Aligned_cols=75 Identities=12% Similarity=0.136 Sum_probs=46.6
Q ss_pred cEEEEEeeccccCCChHHHHHHHHHHcCC--CCeEEecCCCCCCChhhHHhhccCccEEeccCC----CCCCchhHHHHH
Q 014048 247 KTLLFFQGNTIRKDEGKVRAKLAKILTGY--DDVHYERSAPTTKSIKESTEGMRSSKFCLHPAG----DTPSSCRLFDAI 320 (431)
Q Consensus 247 ~~L~~F~G~~~~~~~~~iR~~L~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~S~FCL~P~G----d~~~s~Rl~DAi 320 (431)
.+-+.+.|. |..|..|.+..++. +++.+..+. ...+++.+.|+.+..++.|.. .+ ....++|||
T Consensus 261 ~i~l~ivG~------G~~~~~l~~~~~~~~l~~v~~~~~~---~~~~~~~~~l~~aDv~v~~~~s~~~e~-~p~~llEAm 330 (371)
T PLN02275 261 RLLFIITGK------GPQKAMYEEKISRLNLRHVAFRTMW---LEAEDYPLLLGSADLGVSLHTSSSGLD-LPMKVVDMF 330 (371)
T ss_pred CeEEEEEeC------CCCHHHHHHHHHHcCCCceEEEcCC---CCHHHHHHHHHhCCEEEEecccccccc-ccHHHHHHH
Confidence 466778884 33455565555432 345554321 124567788888988876532 22 356799999
Q ss_pred HhcceeEEEeCC
Q 014048 321 VSHCVPVIVSDR 332 (431)
Q Consensus 321 ~~GCIPVii~d~ 332 (431)
.+|+ |||.++.
T Consensus 331 A~G~-PVVa~~~ 341 (371)
T PLN02275 331 GCGL-PVCAVSY 341 (371)
T ss_pred HCCC-CEEEecC
Confidence 9995 8888753
No 85
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=25.92 E-value=1e+02 Score=30.03 Aligned_cols=35 Identities=14% Similarity=0.316 Sum_probs=27.9
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEe
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVS 330 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~ 330 (431)
..+..+.|..|...+...| + .++|++.+| +|+|+-
T Consensus 232 ~~~m~~lm~~aDl~Is~~G-~----T~~E~~a~g-~P~i~i 266 (279)
T TIGR03590 232 VENMAELMNEADLAIGAAG-S----TSWERCCLG-LPSLAI 266 (279)
T ss_pred HHHHHHHHHHCCEEEECCc-h----HHHHHHHcC-CCEEEE
Confidence 3456788999999999876 3 299999999 777654
No 86
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=25.72 E-value=71 Score=31.44 Aligned_cols=85 Identities=11% Similarity=0.155 Sum_probs=48.0
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCc-------ccCcCCCCCCCceEEEeecc--ccCCcccH
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRI-------ELPFEDEIDYSEFSVFFSIK--EAGQPGYM 361 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~-------~lPf~~~ldw~~fsV~i~~~--d~~~~~~l 361 (431)
.++.+.|..+.+.+.+.|. ..+.|||.+|+ |||+.+.- ..+.+.+.+ ....+.++.. +..+ +
T Consensus 244 ~~~~~~l~~ad~~v~~sg~----~t~~Eam~~G~-Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~~~~~~---l 314 (350)
T cd03785 244 DDMAAAYAAADLVISRAGA----STVAELAALGL-PAILIPLPYAADDHQTANARALVK-AGAAVLIPQEELTPER---L 314 (350)
T ss_pred hhHHHHHHhcCEEEECCCH----hHHHHHHHhCC-CEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCCCCHHH---H
Confidence 3567788899998887662 35899999996 56654321 111122222 2345555543 2222 4
Q ss_pred HHHHcCC--CHHHHHHHHHHHHhhh
Q 014048 362 IDQLRQI--PKARWIEMWQRLKSIS 384 (431)
Q Consensus 362 ~~iL~~i--~~~~i~~Mr~~l~~v~ 384 (431)
.+.|+.+ +++...+|+++.++..
T Consensus 315 ~~~i~~ll~~~~~~~~~~~~~~~~~ 339 (350)
T cd03785 315 AAALLELLSDPERLKAMAEAARSLA 339 (350)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 3333322 5677778887765543
No 87
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=25.71 E-value=3.6e+02 Score=26.85 Aligned_cols=59 Identities=24% Similarity=0.154 Sum_probs=38.3
Q ss_pred HHHHHHHHHHcCCCCeEEecCCCCCCChhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeC
Q 014048 263 KVRAKLAKILTGYDDVHYERSAPTTKSIKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSD 331 (431)
Q Consensus 263 ~iR~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d 331 (431)
.++..+.+.+...+.+.+.+. .+..++...|+.+.+.+.+.|. -+.||+.+| +|||...
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~----~~~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g-~PvI~~~ 300 (365)
T TIGR00236 242 VVREPLHKHLGDSKRVHLIEP----LEYLDFLNLAANSHLILTDSGG-----VQEEAPSLG-KPVLVLR 300 (365)
T ss_pred HHHHHHHHHhCCCCCEEEECC----CChHHHHHHHHhCCEEEECChh-----HHHHHHHcC-CCEEECC
Confidence 455556555544445666542 1234577888999998876542 379999998 4788753
No 88
>PRK10125 putative glycosyl transferase; Provisional
Probab=23.68 E-value=2.8e+02 Score=28.63 Aligned_cols=63 Identities=14% Similarity=0.048 Sum_probs=41.8
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccC
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAG 356 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~ 356 (431)
..+..+.++.+.-.+.|.-......-+.|||++| +|||..+---.| ++++-. -.+.++..|+.
T Consensus 297 ~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G-~PVVat~~gG~~--Eiv~~~-~G~lv~~~d~~ 359 (405)
T PRK10125 297 KRKLMSALNQMDALVFSSRVDNYPLILCEALSIG-VPVIATHSDAAR--EVLQKS-GGKTVSEEEVL 359 (405)
T ss_pred HHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC-CCEEEeCCCChH--HhEeCC-cEEEECCCCHH
Confidence 3456777888887777765555678899999999 588888653332 234322 46666766643
No 89
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=23.00 E-value=59 Score=18.53 Aligned_cols=14 Identities=29% Similarity=0.913 Sum_probs=10.1
Q ss_pred HHHHHHHHhhcccc
Q 014048 17 LIFLLLLVITYSVF 30 (431)
Q Consensus 17 ~~~~~~~~~~~~~~ 30 (431)
+++++|+...+|+|
T Consensus 6 IIlvvLLliSf~aY 19 (19)
T PF13956_consen 6 IILVVLLLISFPAY 19 (19)
T ss_pred HHHHHHHhccccCC
Confidence 45677777788776
No 90
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=22.85 E-value=84 Score=34.16 Aligned_cols=44 Identities=23% Similarity=0.302 Sum_probs=33.2
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccC
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELP 336 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lP 336 (431)
..++.++|++|+-=+= -|.-.-++.=+|||..|| |+|.+.+.-|
T Consensus 332 ~~ef~~lL~~akvfiG-lGfP~EgPaPlEAia~G~--vFlNp~~~pp 375 (559)
T PF15024_consen 332 GDEFQQLLRKAKVFIG-LGFPYEGPAPLEAIANGC--VFLNPRFNPP 375 (559)
T ss_pred HHHHHHHHHhhhEeee-cCCCCCCCChHHHHHcCC--ccccccCCCC
Confidence 5678899999885443 366667788999999999 5777765544
No 91
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=22.62 E-value=4.4e+02 Score=27.35 Aligned_cols=138 Identities=12% Similarity=0.106 Sum_probs=78.9
Q ss_pred CCCCCCcEEEEEeeccccCCChHHHHHHHHHHcCCCC---eEEecCCCC----CCChhhHHhhccCccEEeccCCCCCCc
Q 014048 241 DPFVARKTLLFFQGNTIRKDEGKVRAKLAKILTGYDD---VHYERSAPT----TKSIKESTEGMRSSKFCLHPAGDTPSS 313 (431)
Q Consensus 241 ~~~~~R~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~l~~S~FCL~P~Gd~~~s 313 (431)
.+..+|.-.++|+|+... +..|+.|++.-.+.++ ..+...... ......-++...+-+|=+...|.+. |
T Consensus 152 ~pW~~K~p~afWRG~~~~---~~~R~~L~~~~~~~~~~~~a~i~~~d~~~~~~~~~~~~~l~~~~~yKYli~idG~~~-S 227 (395)
T PF05686_consen 152 VPWEDKKPKAFWRGSPTV---AETRQRLVRCSRSHPDLWDARITKQDWDKEYKPGFKHVPLEDQCKYKYLIYIDGNAW-S 227 (395)
T ss_pred CChhhcccceEECCCcCC---CcchhHHHHHhccCCccceeeechhhhhhhccccccccCHHHHhhhheeecCCCcee-e
Confidence 466778888999998753 3379999876555443 222211000 0001122344567888899999986 7
Q ss_pred hhHHHHHHhcceeEEEeCCcccCc-CCCCCCCceEEEeec-cccCCcccHHHHHcCC--CHHHHHHHHHHHHhhhhc
Q 014048 314 CRLFDAIVSHCVPVIVSDRIELPF-EDEIDYSEFSVFFSI-KEAGQPGYMIDQLRQI--PKARWIEMWQRLKSISHY 386 (431)
Q Consensus 314 ~Rl~DAi~~GCIPVii~d~~~lPf-~~~ldw~~fsV~i~~-~d~~~~~~l~~iL~~i--~~~~i~~Mr~~l~~v~~~ 386 (431)
.|+.=-|++|++.+.....+.-=| +...+|.-|. -|.. .+... |.+.++=. .+++.+++=++..+.++.
T Consensus 228 ~RlkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYV-PV~~~~d~sd---L~~~v~w~~~~~~~A~~IA~~g~~f~~~ 300 (395)
T PF05686_consen 228 GRLKYLLACNSVVLKVKSPYYEFFYRALKPWVHYV-PVKRDDDLSD---LEEKVEWLNAHDDEAQRIAENGQRFARE 300 (395)
T ss_pred hhHHHHHcCCceEEEeCCcHHHHHHhhhcccccEE-Eeccccchhh---HHHHhhhcccChHHHHHHHHHHHHHHHH
Confidence 889888999999877765542222 2234666653 3333 12222 55544322 355555655555554433
No 92
>PLN02316 synthase/transferase
Probab=21.29 E-value=76 Score=37.21 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=32.5
Q ss_pred hhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeC
Q 014048 295 EGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSD 331 (431)
Q Consensus 295 ~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d 331 (431)
..++.|.+.+.|.=..+......+||.+||+||+-..
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~v 951 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKT 951 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcC
Confidence 5789999999998777888999999999999999643
No 93
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=20.51 E-value=1e+02 Score=28.70 Aligned_cols=42 Identities=26% Similarity=0.270 Sum_probs=29.9
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCc
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRI 333 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~ 333 (431)
....+.++.+...+.|.-.......+.||+.+| +|||.++.-
T Consensus 268 ~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g-~pvi~~~~~ 309 (381)
T COG0438 268 EELAELLASADVFVLPSLSEGFGLVLLEAMAAG-TPVIASDVG 309 (381)
T ss_pred HHHHHHHHhCCEEEeccccccchHHHHHHHhcC-CcEEECCCC
Confidence 345556777889998853322334499999999 999887653
No 94
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=20.13 E-value=61 Score=32.65 Aligned_cols=74 Identities=20% Similarity=0.195 Sum_probs=62.7
Q ss_pred CCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcCCCHHHHHHHHHHHHhh
Q 014048 307 AGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQIPKARWIEMWQRLKSI 383 (431)
Q Consensus 307 ~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v 383 (431)
.|-|+..+.+.+.+.---|+|=++---.--|.++++++++-|..+.+...- |.+.=|+++++++.++.+..--+
T Consensus 145 ~GLs~~Gk~lV~~~N~LgIiiDlSH~s~kt~~Dvl~~s~~PviaSHSN~~a---l~~h~RNl~D~qlkaI~~~gGvI 218 (313)
T COG2355 145 GGLTPFGKELVREMNELGIIIDLSHLSDKTFWDVLDLSKAPVVASHSNARA---LVDHPRNLSDEQLKAIAETGGVI 218 (313)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEecccCCccHHHHHhccCCceEEecCCchh---ccCCCCCCCHHHHHHHHhcCCEE
Confidence 466777899999999999998888777788999999999999998877654 88888999999999998876544
Done!