Query 014048
Match_columns 431
No_of_seqs 235 out of 801
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 04:33:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014048.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014048hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qhp_A Type 1 capsular polysac 96.9 0.0012 4.2E-08 57.0 6.2 97 290-391 65-162 (166)
2 2bfw_A GLGA glycogen synthase; 96.0 0.016 5.5E-07 51.2 7.5 124 248-386 71-198 (200)
3 3c48_A Predicted glycosyltrans 94.3 0.13 4.3E-06 51.1 9.0 95 291-390 317-412 (438)
4 2gek_A Phosphatidylinositol ma 94.0 0.0092 3.1E-07 58.6 -0.2 94 291-390 274-370 (406)
5 2r60_A Glycosyl transferase, g 93.6 0.072 2.5E-06 54.3 5.7 148 265-428 321-477 (499)
6 2nzw_A Alpha1,3-fucosyltransfe 93.4 0.23 8E-06 49.5 8.8 120 245-377 178-308 (371)
7 2jjm_A Glycosyl transferase, g 93.0 0.094 3.2E-06 51.4 5.3 95 291-390 276-372 (394)
8 2iw1_A Lipopolysaccharide core 92.7 0.082 2.8E-06 51.0 4.3 94 292-390 263-358 (374)
9 3okp_A GDP-mannose-dependent a 92.5 0.11 3.7E-06 50.5 4.9 94 291-390 264-366 (394)
10 1f0k_A MURG, UDP-N-acetylgluco 91.4 0.063 2.1E-06 51.9 1.7 87 292-385 247-339 (364)
11 3fro_A GLGA glycogen synthase; 90.5 0.37 1.3E-05 47.3 6.4 94 290-390 321-417 (439)
12 2f9f_A First mannosyl transfer 90.2 0.055 1.9E-06 47.3 0.0 41 291-332 89-129 (177)
13 3oy2_A Glycosyltransferase B73 87.1 0.37 1.2E-05 47.4 3.6 97 290-390 264-377 (413)
14 2x6q_A Trehalose-synthase TRET 86.6 0.71 2.4E-05 45.4 5.4 92 292-390 308-401 (416)
15 3rhz_A GTF3, nucleotide sugar 86.0 0.36 1.2E-05 47.5 2.8 93 290-390 224-323 (339)
16 3s28_A Sucrose synthase 1; gly 81.1 2.2 7.6E-05 46.9 6.8 96 292-390 656-756 (816)
17 1rzu_A Glycogen synthase 1; gl 80.6 1.4 4.8E-05 44.2 4.8 85 292-382 358-456 (485)
18 2x0d_A WSAF; GT4 family, trans 78.1 0.61 2.1E-05 46.8 1.1 63 290-356 305-367 (413)
19 2vsy_A XCC0866; transferase, g 76.7 3.9 0.00013 41.9 6.8 85 291-390 445-546 (568)
20 2iuy_A Avigt4, glycosyltransfe 76.4 3.1 0.00011 39.4 5.6 41 291-332 223-273 (342)
21 3beo_A UDP-N-acetylglucosamine 75.8 1.3 4.4E-05 42.6 2.7 36 291-332 274-309 (375)
22 1vgv_A UDP-N-acetylglucosamine 73.1 1.1 3.9E-05 43.2 1.5 103 291-414 274-377 (384)
23 2qzs_A Glycogen synthase; glyc 57.6 4.6 0.00016 40.3 2.5 85 292-382 359-457 (485)
24 3kpe_B Fusion glycoprotein F0; 51.8 9.8 0.00034 24.9 2.4 29 395-423 3-31 (39)
25 3s2u_A UDP-N-acetylglucosamine 51.1 27 0.00092 33.8 6.8 101 292-411 245-356 (365)
26 2o6l_A UDP-glucuronosyltransfe 50.1 19 0.00065 30.3 4.9 134 245-386 20-167 (170)
27 1uqt_A Alpha, alpha-trehalose- 47.7 23 0.00078 36.2 5.8 92 290-387 342-438 (482)
28 3dzc_A UDP-N-acetylglucosamine 44.2 15 0.00052 36.2 3.7 118 263-407 275-395 (396)
29 3nb0_A Glycogen [starch] synth 44.0 10 0.00036 40.8 2.6 99 291-391 510-621 (725)
30 1g2c_B Fusion protein (F); mem 36.2 13 0.00044 24.9 1.1 30 394-423 7-36 (43)
31 2ygg_A Sodium/hydrogen exchang 35.1 50 0.0017 24.6 4.3 57 367-423 3-64 (70)
32 2hy7_A Glucuronosyltransferase 30.4 22 0.00074 35.0 2.3 41 291-332 276-323 (406)
33 3ot5_A UDP-N-acetylglucosamine 29.8 33 0.0011 33.8 3.5 121 264-410 270-392 (403)
34 3l7x_A SMU.412C, putative HIT- 29.6 1.1E+02 0.0037 26.6 6.5 62 316-384 39-103 (173)
35 3vue_A GBSS-I, granule-bound s 28.1 1.4E+02 0.0048 30.5 8.1 40 291-331 393-432 (536)
36 3ksv_A Uncharacterized protein 26.4 1.2E+02 0.004 25.6 6.0 65 315-386 13-80 (149)
37 3o0m_A HIT family protein; ssg 24.2 1.4E+02 0.0047 24.9 6.0 62 317-385 9-73 (149)
38 3otg_A CALG1; calicheamicin, T 23.5 89 0.003 29.8 5.3 136 244-386 240-393 (412)
39 3p0t_A Uncharacterized protein 22.5 1.7E+02 0.0058 23.9 6.2 64 315-385 7-73 (138)
40 2eo4_A 150AA long hypothetical 22.0 1.6E+02 0.0054 24.4 6.0 61 317-384 3-66 (149)
41 2iyf_A OLED, oleandomycin glyc 21.6 1.4E+02 0.0048 28.7 6.4 135 244-385 230-383 (430)
42 1v4v_A UDP-N-acetylglucosamine 21.6 1.5E+02 0.0053 27.7 6.5 97 292-409 267-364 (376)
43 3lb5_A HIT-like protein involv 20.9 1.7E+02 0.0058 24.9 6.0 52 327-385 44-96 (161)
No 1
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=96.93 E-value=0.0012 Score=56.96 Aligned_cols=97 Identities=16% Similarity=0.119 Sum_probs=62.6
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCC
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQI 368 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i 368 (431)
..+..+.++.+..++.|.-.......+.|||.+||+|||..+..-- ..+.+.-... .++..+..+.. .|.+++.
T Consensus 65 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~-~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~-- 139 (166)
T 3qhp_A 65 SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSA-TRQFALDERS--LFEPNNAKDLSAKIDWWLE-- 139 (166)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG-GGGGCSSGGG--EECTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCc-hhhhccCCce--EEcCCCHHHHHHHHHHHHh--
Confidence 4567889999999999975555678999999999999999443211 1122222333 34444433311 1444444
Q ss_pred CHHHHHHHHHHHHhhhhceEecC
Q 014048 369 PKARWIEMWQRLKSISHYYEFQY 391 (431)
Q Consensus 369 ~~~~i~~Mr~~l~~v~~~~~y~~ 391 (431)
.++...+|.++.++..++|.|..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~s~~~ 162 (166)
T 3qhp_A 140 NKLERERMQNEYAKSALNYTLEN 162 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHHHCChhh
Confidence 78889999999888778777653
No 2
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=95.95 E-value=0.016 Score=51.24 Aligned_cols=124 Identities=13% Similarity=0.109 Sum_probs=75.2
Q ss_pred EEEEEeeccccCCChHHHHHHHHHHcCCCCeEE-ecCCCCCCChhhHHhhccCccEEeccCCCCCCchhHHHHHHhccee
Q 014048 248 TLLFFQGNTIRKDEGKVRAKLAKILTGYDDVHY-ERSAPTTKSIKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVP 326 (431)
Q Consensus 248 ~L~~F~G~~~~~~~~~iR~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIP 326 (431)
+-+.+.|... ...+..+.+..+..+.+.+ .... ...++.+.|+.+.+++.|.-....+..++|||.+|| |
T Consensus 71 ~~l~i~G~~~----~~~~~~l~~~~~~~~~v~~~~g~~----~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-P 141 (200)
T 2bfw_A 71 MRFIIIGKGD----PELEGWARSLEEKHGNVKVITEML----SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-I 141 (200)
T ss_dssp EEEEEECCBC----HHHHHHHHHHHHHCTTEEEECSCC----CHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-E
T ss_pred eEEEEECCCC----hHHHHHHHHHHHhcCCEEEEeccC----CHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCC-C
Confidence 4566667521 1244555554444346666 4321 234678899999999999766556788999999998 6
Q ss_pred EEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcC---CCHHHHHHHHHHHHhhhhc
Q 014048 327 VIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQ---IPKARWIEMWQRLKSISHY 386 (431)
Q Consensus 327 Vii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~---i~~~~i~~Mr~~l~~v~~~ 386 (431)
||.++.-. ..+.++ ....+.++..+... +.+.|.. +.+++..+|.++.++....
T Consensus 142 vI~~~~~~--~~e~~~-~~~g~~~~~~~~~~---l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 142 PIASAVGG--LRDIIT-NETGILVKAGDPGE---LANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp EEEESCHH--HHHHCC-TTTCEEECTTCHHH---HHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCC--hHHHcC-CCceEEecCCCHHH---HHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 77776421 112221 23344455444332 4443333 3788889999988876654
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=94.29 E-value=0.13 Score=51.13 Aligned_cols=95 Identities=13% Similarity=0.074 Sum_probs=62.4
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIP 369 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~ 369 (431)
.+..+.|+.+..++.|.-.......+.|||.+|| |||.++.-. ..+.+.-....+.++..|..+.. .|.++|. .
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~--~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~--~ 391 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAARVGG--LPIAVAEGETGLLVDGHSPHAWADALATLLD--D 391 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESCTT--HHHHSCBTTTEEEESSCCHHHHHHHHHHHHH--C
T ss_pred HHHHHHHHhCCEEEECccccCCchHHHHHHHcCC-CEEecCCCC--hhHHhhCCCcEEECCCCCHHHHHHHHHHHHc--C
Confidence 4577889999999999766556789999999998 888887421 22233333445566644433311 1344444 6
Q ss_pred HHHHHHHHHHHHhhhhceEec
Q 014048 370 KARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
++...+|.++.++....|.|.
T Consensus 392 ~~~~~~~~~~~~~~~~~~s~~ 412 (438)
T 3c48_A 392 DETRIRMGEDAVEHARTFSWA 412 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 778889988888876664443
No 4
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=93.96 E-value=0.0092 Score=58.60 Aligned_cols=94 Identities=17% Similarity=0.190 Sum_probs=60.4
Q ss_pred hhHHhhccCccEEeccCC-CCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcCC-
Q 014048 291 KESTEGMRSSKFCLHPAG-DTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQI- 368 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~G-d~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i- 368 (431)
.+..+.|+.|.+++.|.. .......++|||.+|| |||.++.-..+ +.+.-....+.++..+..+ +.+.|..+
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~-PvI~~~~~~~~--e~i~~~~~g~~~~~~d~~~---l~~~i~~l~ 347 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDAFR--RVLADGDAGRLVPVDDADG---MAAALIGIL 347 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTC-EEEECCCHHHH--HHHTTTTSSEECCTTCHHH---HHHHHHHHH
T ss_pred HHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCC-CEEEecCCcHH--HHhcCCCceEEeCCCCHHH---HHHHHHHHH
Confidence 456788999999999953 3335778999999997 78887752211 2222223344555444333 43333333
Q ss_pred -CHHHHHHHHHHHHhhhhceEec
Q 014048 369 -PKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 369 -~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
.++...+|.++.++....|.|.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~s~~ 370 (406)
T 2gek_A 348 EDDQLRAGYVARASERVHRYDWS 370 (406)
T ss_dssp HCHHHHHHHHHHHHHHGGGGBHH
T ss_pred cCHHHHHHHHHHHHHHHHhCCHH
Confidence 6788889999888877765554
No 5
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=93.57 E-value=0.072 Score=54.28 Aligned_cols=148 Identities=14% Similarity=0.160 Sum_probs=74.4
Q ss_pred HHHHHHHHcC---CCCeEEecCCCCCCChhhHHhhccCc----cEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCc
Q 014048 265 RAKLAKILTG---YDDVHYERSAPTTKSIKESTEGMRSS----KFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPF 337 (431)
Q Consensus 265 R~~L~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~S----~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf 337 (431)
+..|.+..+. .+.+.+.... ...+..+.|+.+ ..++.|.-.......+.|||.+|| |||.++.--.
T Consensus 321 ~~~l~~~~~~~~l~~~V~~~G~v----~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-PvI~s~~~g~-- 393 (499)
T 2r60_A 321 LGKIIELIDNNDCRGKVSMFPLN----SQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVTRNGGP-- 393 (499)
T ss_dssp HHHHHHHHHHTTCBTTEEEEECC----SHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-CEEEESSBHH--
T ss_pred HHHHHHHHHhcCCCceEEECCCC----CHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-CEEEecCCCH--
Confidence 4555444432 2346665321 234677888999 888888644445778999999997 7888774221
Q ss_pred CCCCCCCceEEEeeccccCCcc-cHHHHHcCCCHHHHHHHHHHHHhhhhc-eEecCCCCCCCHHHHHHHHHHhhhhhhhh
Q 014048 338 EDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIPKARWIEMWQRLKSISHY-YEFQYPPKKEDAVNMVWRQVKNKIPGVQL 415 (431)
Q Consensus 338 ~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~~~~i~~Mr~~l~~v~~~-~~y~~p~~~~DAf~~~~~~l~~R~~~~k~ 415 (431)
.+.+.-....+.++..|..... .|.++|. .++...+|.++.++.... |.|.. +--.+.++.+++-.-+.
T Consensus 394 ~e~v~~~~~g~l~~~~d~~~la~~i~~ll~--~~~~~~~~~~~a~~~~~~~fs~~~-------~~~~~~~~y~~~~~~~~ 464 (499)
T 2r60_A 394 AEILDGGKYGVLVDPEDPEDIARGLLKAFE--SEETWSAYQEKGKQRVEERYTWQE-------TARGYLEVIQEIADRKD 464 (499)
T ss_dssp HHHTGGGTSSEEECTTCHHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHHHSBHHH-------HHHHHHHHHHHHHHC--
T ss_pred HHHhcCCceEEEeCCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHhCCHHH-------HHHHHHHHHHHHHhhhh
Confidence 1222222233455544433211 1444444 677788888888775544 77663 32233333334433333
Q ss_pred hhhhccccCCCCc
Q 014048 416 AVHRHRRLKIPDW 428 (431)
Q Consensus 416 ~~~~~~~~~~~~~ 428 (431)
...+.....++||
T Consensus 465 ~~~~~~~~~~~~~ 477 (499)
T 2r60_A 465 EEDEGGSLNIPDY 477 (499)
T ss_dssp -------------
T ss_pred hhccccccccchh
Confidence 3333334456676
No 6
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=93.38 E-value=0.23 Score=49.55 Aligned_cols=120 Identities=17% Similarity=0.231 Sum_probs=72.8
Q ss_pred CCcEEEE-EeeccccCCChHHHHHHHHHHcCCCCeEEec-CCCC-CCChhhHHhhccCccEEeccC---CCCCCchhHHH
Q 014048 245 ARKTLLF-FQGNTIRKDEGKVRAKLAKILTGYDDVHYER-SAPT-TKSIKESTEGMRSSKFCLHPA---GDTPSSCRLFD 318 (431)
Q Consensus 245 ~R~~L~~-F~G~~~~~~~~~iR~~L~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~~S~FCL~P~---Gd~~~s~Rl~D 318 (431)
.++-+++ ++.+.. ...|..++++++..-.+.... |... +.......+.+++-+|.|+.. .....+--+|+
T Consensus 178 ~K~k~v~wvvSnc~----~~~R~~~~~~L~k~i~Vd~~G~c~~~~~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~~~ 253 (371)
T 2nzw_A 178 LKRGFASFVASNPN----APIRNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIID 253 (371)
T ss_dssp TSSEEEEECCSCCC----CHHHHHHHHHHTTTSCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHH
T ss_pred CCceEEEEEEeCCC----cHHHHHHHHHHhCcCCEeeCCCccCCCCCccccHHHHHhcCcEEEEEeccCCCCcccHHHHH
Confidence 4445555 444442 257999999998765554432 2211 112234667889999999864 34566889999
Q ss_pred HHHhcceeEEEeCC-c--ccCcCCCCCCCceEEEeeccccCCcccHHHHHcCC--CHHHHHHHH
Q 014048 319 AIVSHCVPVIVSDR-I--ELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQI--PKARWIEMW 377 (431)
Q Consensus 319 Ai~~GCIPVii~d~-~--~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i--~~~~i~~Mr 377 (431)
|+.+|||||+++.. + .+|=+..| ..+|...+..|.+.|+.+ .++.+.++-
T Consensus 254 al~~g~VPI~~G~~~~~~~~Pp~SfI---------~~~dF~s~~~La~yL~~L~~n~~~Y~~y~ 308 (371)
T 2nzw_A 254 AYFSHTIPIYWGSPSVAKDFNPKSFV---------NVHDFKNFDEAIDYIKYLHTHKNAYLDML 308 (371)
T ss_dssp HHHTTCEEEEESCTTGGGTSCGGGSE---------EGGGSSSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHhCCeEEEEECCCchhhhCCCCceE---------EcccCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 99999999999864 2 23323322 334444433466666655 345555543
No 7
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=93.03 E-value=0.094 Score=51.42 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=62.8
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIP 369 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~ 369 (431)
.+..+.|+.+..++.|.-....+..+.|||.+| +|||.++.- ...+.+.-....+.++..|..+.. .|.++|. .
T Consensus 276 ~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G-~PvI~~~~~--~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~--~ 350 (394)
T 2jjm_A 276 DNVAELLAMSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRVG--GIPEVIQHGDTGYLCEVGDTTGVADQAIQLLK--D 350 (394)
T ss_dssp SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTT-CCEEEECCT--TSTTTCCBTTTEEEECTTCHHHHHHHHHHHHH--C
T ss_pred hhHHHHHHhCCEEEeccccCCCchHHHHHHhcC-CCEEEecCC--ChHHHhhcCCceEEeCCCCHHHHHHHHHHHHc--C
Confidence 346678899999999875555678999999999 577777643 223444434455666655543311 1334444 6
Q ss_pred HHHHHHHHHHHHhhh-hceEec
Q 014048 370 KARWIEMWQRLKSIS-HYYEFQ 390 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v~-~~~~y~ 390 (431)
++...+|.++.++.. +.|.|.
T Consensus 351 ~~~~~~~~~~~~~~~~~~~s~~ 372 (394)
T 2jjm_A 351 EELHRNMGERARESVYEQFRSE 372 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHH
Confidence 778889988888766 776665
No 8
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=92.70 E-value=0.082 Score=51.04 Aligned_cols=94 Identities=15% Similarity=0.168 Sum_probs=60.8
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEee-ccccCCcc-cHHHHHcCCC
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFS-IKEAGQPG-YMIDQLRQIP 369 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~-~~d~~~~~-~l~~iL~~i~ 369 (431)
+..+.|+.|..++.|.-....+..++|||.+|+ |||.++.-.. .+.+.-....+.++ ..+..+.. .|.++|. .
T Consensus 263 ~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~~~--~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~--~ 337 (374)
T 2iw1_A 263 DVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVCGY--AHYIADANCGTVIAEPFSQEQLNEVLRKALT--Q 337 (374)
T ss_dssp CHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTSTT--THHHHHHTCEEEECSSCCHHHHHHHHHHHHH--C
T ss_pred cHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-CEEEecCCCc--hhhhccCCceEEeCCCCCHHHHHHHHHHHHc--C
Confidence 467788999999998755556788999999998 8888875221 12222123455555 33432211 1444444 6
Q ss_pred HHHHHHHHHHHHhhhhceEec
Q 014048 370 KARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
++...+|.++.++....+.|.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~ 358 (374)
T 2iw1_A 338 SPLRMAWAENARHYADTQDLY 358 (374)
T ss_dssp HHHHHHHHHHHHHHHHHSCCS
T ss_pred hHHHHHHHHHHHHHHHHhhHH
Confidence 888899999998887765443
No 9
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=92.50 E-value=0.11 Score=50.50 Aligned_cols=94 Identities=12% Similarity=0.132 Sum_probs=63.0
Q ss_pred hhHHhhccCccEEeccCCC-------CCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHH
Q 014048 291 KESTEGMRSSKFCLHPAGD-------TPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMI 362 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd-------~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~ 362 (431)
++..+.++.|.+++.|.-. ......+.|||.+| +|||.++.- ...+.+.-. ..+.++..+..+.. .|.
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G-~PvI~~~~~--~~~e~i~~~-~g~~~~~~d~~~l~~~i~ 339 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACG-VPVIAGTSG--GAPETVTPA-TGLVVEGSDVDKLSELLI 339 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTT-CCEEECSST--TGGGGCCTT-TEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcC-CCEEEeCCC--ChHHHHhcC-CceEeCCCCHHHHHHHHH
Confidence 5677889999999999765 45578999999999 588887743 223344434 56666655543311 133
Q ss_pred HHHcCCCHHHHHHHHHHHHhhh-hceEec
Q 014048 363 DQLRQIPKARWIEMWQRLKSIS-HYYEFQ 390 (431)
Q Consensus 363 ~iL~~i~~~~i~~Mr~~l~~v~-~~~~y~ 390 (431)
+++. .++...+|.++.++.. ++|.|.
T Consensus 340 ~l~~--~~~~~~~~~~~~~~~~~~~~s~~ 366 (394)
T 3okp_A 340 ELLD--DPIRRAAMGAAGRAHVEAEWSWE 366 (394)
T ss_dssp HHHT--CHHHHHHHHHHHHHHHHHHTBHH
T ss_pred HHHh--CHHHHHHHHHHHHHHHHHhCCHH
Confidence 4444 7888899998888754 456655
No 10
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=91.36 E-value=0.063 Score=51.93 Aligned_cols=87 Identities=7% Similarity=0.027 Sum_probs=58.5
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCc------CCCCCCCceEEEeeccccCCcccHHHHH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPF------EDEIDYSEFSVFFSIKEAGQPGYMIDQL 365 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf------~~~ldw~~fsV~i~~~d~~~~~~l~~iL 365 (431)
+..+.|+.+..++.|.| ...+.|||.+|+ |||..+.--.|. ..+++-.. .+.++..|.. ...+.+.|
T Consensus 247 ~~~~~~~~ad~~v~~sg----~~~~~EAma~G~-Pvi~~~~~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~-~~~la~~i 319 (364)
T 1f0k_A 247 DMAAAYAWADVVVCRSG----ALTVSEIAAAGL-PALFVPFQHKDRQQYWNALPLEKAGA-AKIIEQPQLS-VDAVANTL 319 (364)
T ss_dssp CHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECCCCCTTCHHHHHHHHHHHTTS-EEECCGGGCC-HHHHHHHH
T ss_pred hHHHHHHhCCEEEECCc----hHHHHHHHHhCC-CEEEeeCCCCchhHHHHHHHHHhCCc-EEEeccccCC-HHHHHHHH
Confidence 45677889999999976 567999999996 888886543332 11222223 6677766521 12377777
Q ss_pred cCCCHHHHHHHHHHHHhhhh
Q 014048 366 RQIPKARWIEMWQRLKSISH 385 (431)
Q Consensus 366 ~~i~~~~i~~Mr~~l~~v~~ 385 (431)
..+.++...+|.++.++...
T Consensus 320 ~~l~~~~~~~~~~~~~~~~~ 339 (364)
T 1f0k_A 320 AGWSRETLLTMAERARAASI 339 (364)
T ss_dssp HTCCHHHHHHHHHHHHHTCC
T ss_pred HhcCHHHHHHHHHHHHHhhc
Confidence 77777778888888776554
No 11
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=90.46 E-value=0.37 Score=47.29 Aligned_cols=94 Identities=14% Similarity=0.152 Sum_probs=61.8
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHHHHHcCC-
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMIDQLRQI- 368 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i- 368 (431)
..+..+.++.|..++.|.-.......+.|||.+|+ |||.++.-.. .+.++-. ..+.++..|..+ +.+.|..+
T Consensus 321 ~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-Pvi~s~~~~~--~e~~~~~-~g~~~~~~d~~~---la~~i~~ll 393 (439)
T 3fro_A 321 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGGL--RDIITNE-TGILVKAGDPGE---LANAILKAL 393 (439)
T ss_dssp HHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC-EEEEESSTHH--HHHCCTT-TCEEECTTCHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC-CeEEcCCCCc--ceeEEcC-ceEEeCCCCHHH---HHHHHHHHH
Confidence 45577889999999999766666889999999995 7777764321 2223212 445555555433 43333322
Q ss_pred --CHHHHHHHHHHHHhhhhceEec
Q 014048 369 --PKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 369 --~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
+++...+|.++.++..+.|.|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~s~~ 417 (439)
T 3fro_A 394 ELSRSDLSKFRENCKKRAMSFSWE 417 (439)
T ss_dssp HHTTTTTHHHHHHHHHHHHTSCHH
T ss_pred hcCHHHHHHHHHHHHHHHhhCcHH
Confidence 4677888988888877776554
No 12
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=90.17 E-value=0.055 Score=47.27 Aligned_cols=41 Identities=24% Similarity=0.176 Sum_probs=32.4
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDR 332 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~ 332 (431)
.+..+.++.|.+++.|.-.......++|||.+|| |||.++.
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~ 129 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNE 129 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESS
T ss_pred HHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCC
Confidence 4577889999999997644445778999999998 7887765
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=87.09 E-value=0.37 Score=47.37 Aligned_cols=97 Identities=10% Similarity=0.048 Sum_probs=58.1
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccC--cCC----CCCCCce-------EE--Eeeccc
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELP--FED----EIDYSEF-------SV--FFSIKE 354 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lP--f~~----~ldw~~f-------sV--~i~~~d 354 (431)
..+..+.++.|..++.|.-.......+.|||.+|| |||.++.--.+ ..+ .++...+ .+ .++..+
T Consensus 264 ~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d 342 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIID 342 (413)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECC
T ss_pred HHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCC
Confidence 34577889999999998765556788999999996 88888752111 000 0111111 22 333334
Q ss_pred cCCcc-cHHHHHcCCCHHHHHHHHHHHHhhh-hceEec
Q 014048 355 AGQPG-YMIDQLRQIPKARWIEMWQRLKSIS-HYYEFQ 390 (431)
Q Consensus 355 ~~~~~-~l~~iL~~i~~~~i~~Mr~~l~~v~-~~~~y~ 390 (431)
..... .| ++|. .++...+|.++.++.. +.|.|.
T Consensus 343 ~~~la~~i-~l~~--~~~~~~~~~~~a~~~~~~~fs~~ 377 (413)
T 3oy2_A 343 VDDLVEAF-TFFK--DEKNRKEYGKRVQDFVKTKPTWD 377 (413)
T ss_dssp HHHHHHHH-HHTT--SHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHHH-HHhc--CHHHHHHHHHHHHHHHHHhCCHH
Confidence 33211 13 3333 5777788988888765 566655
No 14
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=86.57 E-value=0.71 Score=45.37 Aligned_cols=92 Identities=16% Similarity=0.048 Sum_probs=57.2
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCCH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIPK 370 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~~ 370 (431)
+..+.++.+..++.|.-.......+.|||.+|| |||.++.--.+ +.+.-....+.++ +..+.. .|.++|. .+
T Consensus 308 ~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-PvI~~~~~g~~--e~i~~~~~g~l~~--d~~~la~~i~~ll~--~~ 380 (416)
T 2x6q_A 308 EVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGGIK--FQIVDGETGFLVR--DANEAVEVVLYLLK--HP 380 (416)
T ss_dssp HHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-CEEEESCHHHH--HHCCBTTTEEEES--SHHHHHHHHHHHHH--CH
T ss_pred HHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-CEEEccCCCCh--hheecCCCeEEEC--CHHHHHHHHHHHHh--CH
Confidence 567788889998888644445788999999997 78888752211 2222223344444 322200 1444444 67
Q ss_pred HHHHHHHHHHHhhh-hceEec
Q 014048 371 ARWIEMWQRLKSIS-HYYEFQ 390 (431)
Q Consensus 371 ~~i~~Mr~~l~~v~-~~~~y~ 390 (431)
+...+|.++.++.. +.|.|.
T Consensus 381 ~~~~~~~~~a~~~~~~~fs~~ 401 (416)
T 2x6q_A 381 EVSKEMGAKAKERVRKNFIIT 401 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTBHH
T ss_pred HHHHHHHHHHHHHHHHHcCHH
Confidence 88888888887654 466554
No 15
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=85.97 E-value=0.36 Score=47.46 Aligned_cols=93 Identities=16% Similarity=0.216 Sum_probs=61.4
Q ss_pred hhhHHhhccCccEEecc-CCC------CCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcccHH
Q 014048 290 IKESTEGMRSSKFCLHP-AGD------TPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPGYMI 362 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P-~Gd------~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~~l~ 362 (431)
.++..+.++++.|+|+. .|. ......++|+|++| +|||.++.-.++ +.+.-...-+.++ ++.+ +.
T Consensus 224 ~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G-~PVI~~~~~~~~--~~v~~~~~G~~~~--~~~e---~~ 295 (339)
T 3rhz_A 224 DEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAG-IPVIVQEGIANQ--ELIENNGLGWIVK--DVEE---AI 295 (339)
T ss_dssp HHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHT-CCEEEETTCTTT--HHHHHHTCEEEES--SHHH---HH
T ss_pred HHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcC-CCEEEccChhHH--HHHHhCCeEEEeC--CHHH---HH
Confidence 45567778789999997 110 11235799999999 599988754332 1111123344443 2222 77
Q ss_pred HHHcCCCHHHHHHHHHHHHhhhhceEec
Q 014048 363 DQLRQIPKARWIEMWQRLKSISHYYEFQ 390 (431)
Q Consensus 363 ~iL~~i~~~~i~~Mr~~l~~v~~~~~y~ 390 (431)
+.|..++++++.+|+++.++..+.+...
T Consensus 296 ~~i~~l~~~~~~~m~~na~~~a~~~~~~ 323 (339)
T 3rhz_A 296 MKVKNVNEDEYIELVKNVRSFNPILRKG 323 (339)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHTHHHHTT
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhhcc
Confidence 7888899999999999999987775533
No 16
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=81.08 E-value=2.2 Score=46.90 Aligned_cols=96 Identities=13% Similarity=0.080 Sum_probs=57.1
Q ss_pred hHHhhcc-CccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcC--
Q 014048 292 ESTEGMR-SSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQ-- 367 (431)
Q Consensus 292 ~~~~~l~-~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~-- 367 (431)
+....++ .+..++.|.=.......+.|||.+|| |||.++.--. .+.+.-..-.+.++..|..... .|.++|..
T Consensus 656 eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-PVIasd~GG~--~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll 732 (816)
T 3s28_A 656 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKGGP--AEIIVHGKSGFHIDPYHGDQAADTLADFFTKCK 732 (816)
T ss_dssp HHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-CEEEESSBTH--HHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-CEEEeCCCCh--HHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhc
Confidence 3445565 45677777544556788999999997 7887764221 1222223344566655543311 13333321
Q ss_pred CCHHHHHHHHHHHHhhh-hceEec
Q 014048 368 IPKARWIEMWQRLKSIS-HYYEFQ 390 (431)
Q Consensus 368 i~~~~i~~Mr~~l~~v~-~~~~y~ 390 (431)
-.++...+|.++.++.. ++|.|.
T Consensus 733 ~d~~~~~~m~~~ar~~a~~~fSwe 756 (816)
T 3s28_A 733 EDPSHWDEISKGGLQRIEEKYTWQ 756 (816)
T ss_dssp HCTHHHHHHHHHHHHHHHHSCCHH
T ss_pred cCHHHHHHHHHHHHHHHHHhCCHH
Confidence 16778889998888765 777776
No 17
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=80.62 E-value=1.4 Score=44.23 Aligned_cols=85 Identities=16% Similarity=0.118 Sum_probs=52.1
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCC---------ceEEEeeccccCCcccHH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYS---------EFSVFFSIKEAGQPGYMI 362 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~---------~fsV~i~~~d~~~~~~l~ 362 (431)
...+.++.+..++.|.-.......+.|||.+|+ |||.++.--. .+.+.-. ...+.++..|... +.
T Consensus 358 ~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~gg~--~e~v~~~~~~~~~~~~~~G~l~~~~d~~~---la 431 (485)
T 1rzu_A 358 LSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTGGL--ADTVIDANHAALASKAATGVQFSPVTLDG---LK 431 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHH--HHHCCBCCHHHHHTTCCCBEEESSCSHHH---HH
T ss_pred HHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-CEEEeCCCCh--hheecccccccccccCCcceEeCCCCHHH---HH
Confidence 345788999999998765556788999999996 6777764211 1222211 3344555545433 43
Q ss_pred HHHcCC-----CHHHHHHHHHHHHh
Q 014048 363 DQLRQI-----PKARWIEMWQRLKS 382 (431)
Q Consensus 363 ~iL~~i-----~~~~i~~Mr~~l~~ 382 (431)
+.|..+ .++...+|.++.++
T Consensus 432 ~~i~~ll~~~~~~~~~~~~~~~~~~ 456 (485)
T 1rzu_A 432 QAIRRTVRYYHDPKLWTQMQKLGMK 456 (485)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 333321 57777888877753
No 18
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=78.15 E-value=0.61 Score=46.81 Aligned_cols=63 Identities=11% Similarity=0.044 Sum_probs=40.9
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccC
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAG 356 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~ 356 (431)
.++..+.++.+..++.|.=....+.-+.|||++|| |||..+. -. .+.++-..-.+.++..|..
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~-PVV~~~~-g~--~e~v~~~~~G~lv~~~d~~ 367 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL-RVITNKY-EN--KDLSNWHSNIVSLEQLNPE 367 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC-EEEEECB-TT--BCGGGTBTTEEEESSCSHH
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCC-cEEEeCC-Cc--chhhhcCCCEEEeCCCCHH
Confidence 45678889999999988532223567899999997 6776543 22 2444334445666766643
No 19
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=76.72 E-value=3.9 Score=41.91 Aligned_cols=85 Identities=12% Similarity=0.109 Sum_probs=53.4
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEE-------eCCc-------ccCcCCCCCCCceEEEeeccccC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIV-------SDRI-------ELPFEDEIDYSEFSVFFSIKEAG 356 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii-------~d~~-------~lPf~~~ldw~~fsV~i~~~d~~ 356 (431)
.+..+.|+.+..++.|.-. .....+.|||.+|+ |||. ++.- -+| +.+.- +.+++.
T Consensus 445 ~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~-Pvv~~~g~~~~s~~~~~~l~~~g~~--e~v~~-------~~~~la 513 (568)
T 2vsy_A 445 PQYLARYRHADLFLDTHPY-NAHTTASDALWTGC-PVLTTPGETFAARVAGSLNHHLGLD--EMNVA-------DDAAFV 513 (568)
T ss_dssp HHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTC-CEEBCCCSSGGGSHHHHHHHHHTCG--GGBCS-------SHHHHH
T ss_pred HHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCC-CEEeccCCCchHHHHHHHHHHCCCh--hhhcC-------CHHHHH
Confidence 3577889999999988755 45788999999996 9998 4422 121 11110 111211
Q ss_pred CcccHHHHHcCCCHHHHHHHHHHHHhhh---hceEec
Q 014048 357 QPGYMIDQLRQIPKARWIEMWQRLKSIS---HYYEFQ 390 (431)
Q Consensus 357 ~~~~l~~iL~~i~~~~i~~Mr~~l~~v~---~~~~y~ 390 (431)
+ .+..++. .++...+|+++.++.. +.|.+.
T Consensus 514 ~--~i~~l~~--~~~~~~~~~~~~~~~~~~~~~f~~~ 546 (568)
T 2vsy_A 514 A--KAVALAS--DPAALTALHARVDVLRRASGVFHMD 546 (568)
T ss_dssp H--HHHHHHH--CHHHHHHHHHHHHHHHHHSSTTCHH
T ss_pred H--HHHHHhc--CHHHHHHHHHHHHHhhhcCCCCCHH
Confidence 1 1344444 5777889998888765 555444
No 20
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=76.43 E-value=3.1 Score=39.40 Aligned_cols=41 Identities=20% Similarity=0.214 Sum_probs=32.9
Q ss_pred hhHHhhccCccEEeccCC----------CCCCchhHHHHHHhcceeEEEeCC
Q 014048 291 KESTEGMRSSKFCLHPAG----------DTPSSCRLFDAIVSHCVPVIVSDR 332 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~G----------d~~~s~Rl~DAi~~GCIPVii~d~ 332 (431)
.+..+.|+++..++.|.- .......+.|||.+|| |||.++.
T Consensus 223 ~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~ 273 (342)
T 2iuy_A 223 ERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGN 273 (342)
T ss_dssp HHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCT
T ss_pred HHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCC
Confidence 346788999999999865 3445788999999996 8888774
No 21
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=75.82 E-value=1.3 Score=42.56 Aligned_cols=36 Identities=17% Similarity=0.024 Sum_probs=28.4
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDR 332 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~ 332 (431)
.+..+.|+.+.+++.|. +.-+.|||.+|+ |||..+.
T Consensus 274 ~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~-Pvi~~~~ 309 (375)
T 3beo_A 274 IDFHNVAARSYLMLTDS-----GGVQEEAPSLGV-PVLVLRD 309 (375)
T ss_dssp HHHHHHHHTCSEEEECC-----HHHHHHHHHHTC-CEEECSS
T ss_pred HHHHHHHHhCcEEEECC-----CChHHHHHhcCC-CEEEecC
Confidence 35678889999999886 223899999996 8998854
No 22
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=73.10 E-value=1.1 Score=43.20 Aligned_cols=103 Identities=13% Similarity=0.065 Sum_probs=56.8
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHHHcCCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQLRQIP 369 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~iL~~i~ 369 (431)
.+..+.|+.|...+.|.|- -+.|||.+|+ |||..+..- ...+.++-. ..+.++. |..+.. .|.++|. .
T Consensus 274 ~~~~~~~~~ad~~v~~Sg~-----~~lEA~a~G~-PvI~~~~~~-~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~--d 342 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDSGG-----IQEEAPSLGK-PVLVMRDTT-ERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLK--D 342 (384)
T ss_dssp HHHHHHHHHCSEEEESSST-----GGGTGGGGTC-CEEEESSCC-SCHHHHHHT-SEEEECS-SHHHHHHHHHHHHH--C
T ss_pred HHHHHHHHhCcEEEECCcc-----hHHHHHHcCC-CEEEccCCC-CcchhhhCC-ceEEeCC-CHHHHHHHHHHHHh--C
Confidence 4567888889988888631 2889999996 999887521 011222222 4555543 322200 1333443 5
Q ss_pred HHHHHHHHHHHHhhhhceEecCCCCCCCHHHHHHHHHHhhhhhhh
Q 014048 370 KARWIEMWQRLKSISHYYEFQYPPKKEDAVNMVWRQVKNKIPGVQ 414 (431)
Q Consensus 370 ~~~i~~Mr~~l~~v~~~~~y~~p~~~~DAf~~~~~~l~~R~~~~k 414 (431)
++...+|.++.++ + . ...+.+.+++.+..-+..+-
T Consensus 343 ~~~~~~~~~~~~~----~--~----~~~~~~~i~~~~~~~~~~~~ 377 (384)
T 1vgv_A 343 ENEYQAMSRAHNP----Y--G----DGQACSRILEALKNNRISLG 377 (384)
T ss_dssp HHHHHHHHSSCCT----T--C----CSCHHHHHHHHHHHTCCCC-
T ss_pred hHHHhhhhhccCC----C--c----CCCHHHHHHHHHHHHHHhhc
Confidence 6666666654322 1 1 24566667676665554443
No 23
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=57.61 E-value=4.6 Score=40.34 Aligned_cols=85 Identities=14% Similarity=0.122 Sum_probs=52.0
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCC---------ceEEEeeccccCCcccHH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYS---------EFSVFFSIKEAGQPGYMI 362 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~---------~fsV~i~~~d~~~~~~l~ 362 (431)
...+.|+.+..++.|.-.......+.|||.+|| |||.++.--. .+.+.-. ...+.++..+... +.
T Consensus 359 ~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-PvI~s~~gg~--~e~v~~~~~~~~~~~~~~G~l~~~~d~~~---la 432 (485)
T 2qzs_A 359 FSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-LPLVRRTGGL--ADTVSDCSLENLADGVASGFVFEDSNAWS---LL 432 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHH--HHHCCBCCHHHHHTTCCCBEEECSSSHHH---HH
T ss_pred HHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-CEEECCCCCc--cceeccCccccccccccceEEECCCCHHH---HH
Confidence 346788899999998765556788999999996 6677664211 1222211 3445555545433 43
Q ss_pred HHHcCC-----CHHHHHHHHHHHHh
Q 014048 363 DQLRQI-----PKARWIEMWQRLKS 382 (431)
Q Consensus 363 ~iL~~i-----~~~~i~~Mr~~l~~ 382 (431)
+.|..+ .++...+|.++.++
T Consensus 433 ~~i~~ll~~~~~~~~~~~~~~~~~~ 457 (485)
T 2qzs_A 433 RAIRRAFVLWSRPSLWRFVQRQAMA 457 (485)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 333322 56777888877653
No 24
>3kpe_B Fusion glycoprotein F0; peptide-small-molecule complex, alpha helix, coiled-coil, EN protein, fusion protein; HET: TM3 PG4; 1.47A {Human respiratory syncytial virus}
Probab=51.77 E-value=9.8 Score=24.94 Aligned_cols=29 Identities=21% Similarity=0.234 Sum_probs=26.2
Q ss_pred CCCHHHHHHHHHHhhhhhhhhhhhhcccc
Q 014048 395 KEDAVNMVWRQVKNKIPGVQLAVHRHRRL 423 (431)
Q Consensus 395 ~~DAf~~~~~~l~~R~~~~k~~~~~~~~~ 423 (431)
++|-||+++++|-+.+.+-+.=+.++.+|
T Consensus 3 P~DqFdvai~qV~e~InqS~~~i~~Sd~l 31 (39)
T 3kpe_B 3 PSDEFDASISQVNEKINQSLAFIRKSDEL 31 (39)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999888888776
No 25
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=51.11 E-value=27 Score=33.80 Aligned_cols=101 Identities=13% Similarity=0.160 Sum_probs=62.4
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcC---------CCCCCCceEEEeeccccCCcccHH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFE---------DEIDYSEFSVFFSIKEAGQPGYMI 362 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~---------~~ldw~~fsV~i~~~d~~~~~~l~ 362 (431)
+..+.|+.|..+++-.| ...+.|++.+|. |+|+-+. |+. ..+--....+.|+++++.. ..|.
T Consensus 245 dm~~~l~~aDlvI~raG----~~Tv~E~~a~G~-P~Ilip~---p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~-~~L~ 315 (365)
T 3s2u_A 245 DMAAAYAWADLVICRAG----ALTVSELTAAGL-PAFLVPL---PHAIDDHQTRNAEFLVRSGAGRLLPQKSTGA-AELA 315 (365)
T ss_dssp CHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECC--------CCHHHHHHHHHHTTTSEEECCTTTCCH-HHHH
T ss_pred hhhhhhccceEEEecCC----cchHHHHHHhCC-CeEEecc---CCCCCcHHHHHHHHHHHCCCEEEeecCCCCH-HHHH
Confidence 34577889999888766 345889999995 8876432 110 0122245688888877532 2233
Q ss_pred HHHcCC--CHHHHHHHHHHHHhhhhceEecCCCCCCCHHHHHHHHHHhhhh
Q 014048 363 DQLRQI--PKARWIEMWQRLKSISHYYEFQYPPKKEDAVNMVWRQVKNKIP 411 (431)
Q Consensus 363 ~iL~~i--~~~~i~~Mr~~l~~v~~~~~y~~p~~~~DAf~~~~~~l~~R~~ 411 (431)
+.|..+ .++.+.+|.++.+++.+ .||-+.+.+.+.+=..
T Consensus 316 ~~i~~ll~d~~~~~~m~~~a~~~~~----------~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 316 AQLSEVLMHPETLRSMADQARSLAK----------PEATRTVVDACLEVAR 356 (365)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHTCC----------TTHHHHHHHHHHHHC-
T ss_pred HHHHHHHCCHHHHHHHHHHHHhcCC----------ccHHHHHHHHHHHHHc
Confidence 333332 57889999999887632 3677766666654443
No 26
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=50.07 E-value=19 Score=30.29 Aligned_cols=134 Identities=10% Similarity=0.151 Sum_probs=65.0
Q ss_pred CCcEEEEEeeccccCCChHHHHHHHHHHcCCCC-eEEecCCC--C--CCC-----hhhHHhhc--cCccEEeccCCCCCC
Q 014048 245 ARKTLLFFQGNTIRKDEGKVRAKLAKILTGYDD-VHYERSAP--T--TKS-----IKESTEGM--RSSKFCLHPAGDTPS 312 (431)
Q Consensus 245 ~R~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~~-~~~~~~~~--~--~~~-----~~~~~~~l--~~S~FCL~P~Gd~~~ 312 (431)
+++.++.+-|+.........-..+++.++..+. +.+..+.. . ..+ .....+.| ..+...+...|.
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~--- 96 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGA--- 96 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCCTTEEEESSCCHHHHHTSTTEEEEEECCCH---
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCCCcEEEecCCCHHHHhcCCCcCEEEEcCCc---
Confidence 455566666765422233444556677765443 22221111 0 001 01123455 677777776553
Q ss_pred chhHHHHHHhcceeEEEeCCc-ccCc-CCCCCCCceEEEeeccccCCcccHHHHHcCCCHHHHHHHHHHHHhhhhc
Q 014048 313 SCRLFDAIVSHCVPVIVSDRI-ELPF-EDEIDYSEFSVFFSIKEAGQPGYMIDQLRQIPKARWIEMWQRLKSISHY 386 (431)
Q Consensus 313 s~Rl~DAi~~GCIPVii~d~~-~lPf-~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v~~~ 386 (431)
..+.||+.+| +|+|+.+.. +.+. ...+......+.++.+++. ...|.+.++.+-.. .+||++.+++...
T Consensus 97 -~t~~Ea~~~G-~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~-~~~l~~~i~~ll~~--~~~~~~a~~~~~~ 167 (170)
T 2o6l_A 97 -NGIYEAIYHG-IPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMS-STDLLNALKRVIND--PSYKENVMKLSRI 167 (170)
T ss_dssp -HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCC-HHHHHHHHHHHHHC--HHHHHHHHHHC--
T ss_pred -cHHHHHHHcC-CCEEeccchhhHHHHHHHHHHcCCeEEeccccCC-HHHHHHHHHHHHcC--HHHHHHHHHHHHH
Confidence 5699999999 788887642 1111 1112234567777755432 12243433332110 1366666666544
No 27
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=47.68 E-value=23 Score=36.18 Aligned_cols=92 Identities=11% Similarity=0.007 Sum_probs=57.3
Q ss_pred hhhHHhhccCccEEeccCCCCCCchhHHHHHHhcc----eeEEEeCCcccCcCCCCCCCceEEEeeccccCCcc-cHHHH
Q 014048 290 IKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHC----VPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQPG-YMIDQ 364 (431)
Q Consensus 290 ~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GC----IPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~~-~l~~i 364 (431)
..+....++.+.-|+.|.=.....--..|||.+|+ -|||+++..-.+ +.++ + .+.|+..|..... .|.++
T Consensus 342 ~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~--~~l~-~--g~lv~p~d~~~lA~ai~~l 416 (482)
T 1uqt_A 342 RKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA--NELT-S--ALIVNPYDRDEVAAALDRA 416 (482)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG--GTCT-T--SEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCH--HHhC-C--eEEECCCCHHHHHHHHHHH
Confidence 45677888888888887543334678999999998 688988743211 1122 2 3556655543311 24455
Q ss_pred HcCCCHHHHHHHHHHHHhhhhce
Q 014048 365 LRQIPKARWIEMWQRLKSISHYY 387 (431)
Q Consensus 365 L~~i~~~~i~~Mr~~l~~v~~~~ 387 (431)
|. .++++.++|.+++++....+
T Consensus 417 L~-~~~~~r~~~~~~~~~~v~~~ 438 (482)
T 1uqt_A 417 LT-MSLAERISRHAEMLDVIVKN 438 (482)
T ss_dssp HT-CCHHHHHHHHHHHHHHHHHT
T ss_pred Hc-CCHHHHHHHHHHHHHHHHhC
Confidence 53 36677777777776655554
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=44.18 E-value=15 Score=36.16 Aligned_cols=118 Identities=16% Similarity=0.157 Sum_probs=64.2
Q ss_pred HHHHHHHHHHcCCCCeEEecCCCCCCChhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCc-ccCcCCCC
Q 014048 263 KVRAKLAKILTGYDDVHYERSAPTTKSIKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRI-ELPFEDEI 341 (431)
Q Consensus 263 ~iR~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~-~lPf~~~l 341 (431)
.+|+.+.+.+...+.+.+.+. .+..++...|+.|...+.+.| +. ..||+.+| +|||+.++. ..| +.+
T Consensus 275 ~~~~~l~~~~~~~~~v~~~~~----lg~~~~~~l~~~ad~vv~~SG-g~----~~EA~a~G-~PvV~~~~~~~~~--e~v 342 (396)
T 3dzc_A 275 NVREPVNKLLKGVSNIVLIEP----QQYLPFVYLMDRAHIILTDSG-GI----QEEAPSLG-KPVLVMRETTERP--EAV 342 (396)
T ss_dssp HHHHHHHHHTTTCTTEEEECC----CCHHHHHHHHHHCSEEEESCS-GG----GTTGGGGT-CCEEECCSSCSCH--HHH
T ss_pred HHHHHHHHHHcCCCCEEEeCC----CCHHHHHHHHHhcCEEEECCc-cH----HHHHHHcC-CCEEEccCCCcch--HHH
Confidence 355555554444445555432 123457788999999988876 32 27999998 599987432 222 122
Q ss_pred CCCceEEEeeccccCCcccHHHHHcCC--CHHHHHHHHHHHHhhhhceEecCCCCCCCHHHHHHHHHH
Q 014048 342 DYSEFSVFFSIKEAGQPGYMIDQLRQI--PKARWIEMWQRLKSISHYYEFQYPPKKEDAVNMVWRQVK 407 (431)
Q Consensus 342 dw~~fsV~i~~~d~~~~~~l~~iL~~i--~~~~i~~Mr~~l~~v~~~~~y~~p~~~~DAf~~~~~~l~ 407 (431)
+- ...+.++. |.. .|.+.+..+ .++...+|.++.. . | ..++|-+-+++.|.
T Consensus 343 ~~-G~~~lv~~-d~~---~l~~ai~~ll~d~~~~~~m~~~~~----~--~----~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 343 AA-GTVKLVGT-NQQ---QICDALSLLLTDPQAYQAMSQAHN----P--Y----GDGKACQRIADILA 395 (396)
T ss_dssp HH-TSEEECTT-CHH---HHHHHHHHHHHCHHHHHHHHTSCC----T--T----CCSCHHHHHHHHHH
T ss_pred Hc-CceEEcCC-CHH---HHHHHHHHHHcCHHHHHHHhhccC----C--C----cCChHHHHHHHHHh
Confidence 21 23455543 211 133333222 4666666665421 1 2 34688887777654
No 29
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=44.01 E-value=10 Score=40.83 Aligned_cols=99 Identities=12% Similarity=0.200 Sum_probs=62.2
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCC------ceEEEeeccccCCc----cc
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYS------EFSVFFSIKEAGQP----GY 360 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~------~fsV~i~~~d~~~~----~~ 360 (431)
.++.+.++.+...+.|.=..+...-..|||++|+ |||.++---++- -+.+.. ...+.|+..+.... ..
T Consensus 510 ~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~-PvI~s~~gG~~d-~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aea 587 (725)
T 3nb0_A 510 LDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV-PSITTNVSGFGS-YMEDLIETNQAKDYGIYIVDRRFKAPDESVEQ 587 (725)
T ss_dssp CCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-CEEEETTBHHHH-HHHTTSCHHHHHHTTEEEECCSSSCHHHHHHH
T ss_pred hHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-CEEEeCCCChhh-hhhccccccCCCCceEEEeCCCCCCHHHHHHH
Confidence 3578889999999999766667899999999996 566665421110 000110 12334432221111 11
Q ss_pred HHHHHc---CCCHHHHHHHHHHHHhhhhceEecC
Q 014048 361 MIDQLR---QIPKARWIEMWQRLKSISHYYEFQY 391 (431)
Q Consensus 361 l~~iL~---~i~~~~i~~Mr~~l~~v~~~~~y~~ 391 (431)
|.+.|. .-++++..+|+++.+++.+.|.|..
T Consensus 588 La~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~ 621 (725)
T 3nb0_A 588 LVDYMEEFVKKTRRQRINQRNATEALSDLLDWKR 621 (725)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 444443 3478888999999999999999985
No 30
>1g2c_B Fusion protein (F); membrane fusion, pneumovirus, HRSV, viral protein; 2.30A {Human respiratory syncytial virus} SCOP: h.3.2.1
Probab=36.24 E-value=13 Score=24.90 Aligned_cols=30 Identities=20% Similarity=0.190 Sum_probs=26.7
Q ss_pred CCCCHHHHHHHHHHhhhhhhhhhhhhcccc
Q 014048 394 KKEDAVNMVWRQVKNKIPGVQLAVHRHRRL 423 (431)
Q Consensus 394 ~~~DAf~~~~~~l~~R~~~~k~~~~~~~~~ 423 (431)
-++|-||+++++|-+++.+-+.=+.++.+|
T Consensus 7 FP~DqFdvai~qV~esI~qS~~~i~~Sd~l 36 (43)
T 1g2c_B 7 FPSDEFDASISQVNEKINQSLAFIRKSDEL 36 (43)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999999999988888776
No 31
>2ygg_A Sodium/hydrogen exchanger 1; metal binding protein-transport protein complex; HET: TAM; 2.23A {Homo sapiens}
Probab=35.09 E-value=50 Score=24.61 Aligned_cols=57 Identities=11% Similarity=0.137 Sum_probs=41.8
Q ss_pred CCCHHHHHHHHHHHH----hhhhc-eEecCCCCCCCHHHHHHHHHHhhhhhhhhhhhhcccc
Q 014048 367 QIPKARWIEMWQRLK----SISHY-YEFQYPPKKEDAVNMVWRQVKNKIPGVQLAVHRHRRL 423 (431)
Q Consensus 367 ~i~~~~i~~Mr~~l~----~v~~~-~~y~~p~~~~DAf~~~~~~l~~R~~~~k~~~~~~~~~ 423 (431)
+++++++++||+-|. +++++ ..|+.-..+.|+.+--+.+++-|-.+.+.+..+..||
T Consensus 3 ~ls~~~~e~ir~IL~~NLykiRqr~~SYnRHtL~~d~~e~q~~EiLiRr~~s~~~~~k~~~Y 64 (70)
T 2ygg_A 3 ALSKDKEEEIRKILRNNLQKTRQRLRSYNRHTLVADPYEEAWNQMLLRRQKARQLEQKINNY 64 (70)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhccccccccCCCCchHHHHHHHHHHHHhhcchhhhhcce
Confidence 367777777776544 45444 4476666778999888999988888888888777776
No 32
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=30.43 E-value=22 Score=34.99 Aligned_cols=41 Identities=12% Similarity=0.271 Sum_probs=33.2
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHH-------HhcceeEEEeCC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAI-------VSHCVPVIVSDR 332 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi-------~~GCIPVii~d~ 332 (431)
++..+.++.+..++.|.=.......+.||| .+| +|||.++.
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G-~PVIas~~ 323 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFG-LPAVCPNA 323 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHT-CCEEEEGG
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCC-CcEEEehh
Confidence 457788999999999865555577899999 999 59998876
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=29.78 E-value=33 Score=33.80 Aligned_cols=121 Identities=21% Similarity=0.204 Sum_probs=63.7
Q ss_pred HHHHHHHHHcCCCCeEEecCCCCCCChhhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCc-ccCcCCCCC
Q 014048 264 VRAKLAKILTGYDDVHYERSAPTTKSIKESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRI-ELPFEDEID 342 (431)
Q Consensus 264 iR~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~-~lPf~~~ld 342 (431)
+|+.+.+.+...+.+.+.+. .+..++...|+.|.+.+.+.| --..||+.+| +|||+.++. ..| +.++
T Consensus 270 ~~~~l~~~~~~~~~v~l~~~----l~~~~~~~l~~~ad~vv~~SG-----g~~~EA~a~g-~PvV~~~~~~~~~--e~v~ 337 (403)
T 3ot5_A 270 VREKAMAILGGHERIHLIEP----LDAIDFHNFLRKSYLVFTDSG-----GVQEEAPGMG-VPVLVLRDTTERP--EGIE 337 (403)
T ss_dssp HHHHHHHHHTTCTTEEEECC----CCHHHHHHHHHHEEEEEECCH-----HHHHHGGGTT-CCEEECCSSCSCH--HHHH
T ss_pred HHHHHHHHhCCCCCEEEeCC----CCHHHHHHHHHhcCEEEECCc-----cHHHHHHHhC-CCEEEecCCCcch--hhee
Confidence 44444443433344544432 123467788999998876653 1127999998 699987432 111 1122
Q ss_pred CCceEEEeeccccCCc-ccHHHHHcCCCHHHHHHHHHHHHhhhhceEecCCCCCCCHHHHHHHHHHhhh
Q 014048 343 YSEFSVFFSIKEAGQP-GYMIDQLRQIPKARWIEMWQRLKSISHYYEFQYPPKKEDAVNMVWRQVKNKI 410 (431)
Q Consensus 343 w~~fsV~i~~~d~~~~-~~l~~iL~~i~~~~i~~Mr~~l~~v~~~~~y~~p~~~~DAf~~~~~~l~~R~ 410 (431)
....+.++. +..+. ..+.++|. .++...+|.++.. . | ..++|-+-+++.|...+
T Consensus 338 -~g~~~lv~~-d~~~l~~ai~~ll~--~~~~~~~m~~~~~----~--~----g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 338 -AGTLKLIGT-NKENLIKEALDLLD--NKESHDKMAQAAN----P--Y----GDGFAANRILAAIKSHF 392 (403)
T ss_dssp -HTSEEECCS-CHHHHHHHHHHHHH--CHHHHHHHHHSCC----T--T----CCSCHHHHHHHHHHHHH
T ss_pred -CCcEEEcCC-CHHHHHHHHHHHHc--CHHHHHHHHhhcC----c--c----cCCcHHHHHHHHHHHHh
Confidence 123444442 21110 01333333 5666677764321 1 2 34789888888887654
No 34
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=29.58 E-value=1.1e+02 Score=26.60 Aligned_cols=62 Identities=18% Similarity=0.282 Sum_probs=33.1
Q ss_pred HHHHHHhccee--EEEeCCcccCcCCCCC-CCceEEEeeccccCCcccHHHHHcCCCHHHHHHHHHHHHhhh
Q 014048 316 LFDAIVSHCVP--VIVSDRIELPFEDEID-YSEFSVFFSIKEAGQPGYMIDQLRQIPKARWIEMWQRLKSIS 384 (431)
Q Consensus 316 l~DAi~~GCIP--Vii~d~~~lPf~~~ld-w~~fsV~i~~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v~ 384 (431)
+|-.|..|-|| ||..++..+-|-+.-. +.-..+.||.+.+.. |..++++++.+|-+.++++.
T Consensus 39 iFC~Ii~~e~p~~iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~-------l~dL~~ee~~~L~~~~~~v~ 103 (173)
T 3l7x_A 39 LFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRN-------ALEMTQTQAANLFARIPKIA 103 (173)
T ss_dssp HHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSC-------GGGCCHHHHHHHHHTHHHHH
T ss_pred cccccccCCCCceEEEECCCEEEEEcCCCCCCcEEEEEeccccCC-------hhhCCHHHHHHHHHHHHHHH
Confidence 33333344444 6677665433433222 233478889877654 33457777766665555443
No 35
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=28.11 E-value=1.4e+02 Score=30.54 Aligned_cols=40 Identities=8% Similarity=-0.049 Sum_probs=30.6
Q ss_pred hhHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeC
Q 014048 291 KESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSD 331 (431)
Q Consensus 291 ~~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d 331 (431)
....+.++.|.+.+.|.=..+....+.|||.+||.+| .++
T Consensus 393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI-~s~ 432 (536)
T 3vue_A 393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCA-CAS 432 (536)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEE-ECS
T ss_pred HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEE-EcC
Confidence 3455678889999999766667889999999998655 444
No 36
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=26.44 E-value=1.2e+02 Score=25.55 Aligned_cols=65 Identities=15% Similarity=0.129 Sum_probs=39.6
Q ss_pred hHHHHHHhccee--EEEeCCcccCcCCCCC-CCceEEEeeccccCCcccHHHHHcCCCHHHHHHHHHHHHhhhhc
Q 014048 315 RLFDAIVSHCVP--VIVSDRIELPFEDEID-YSEFSVFFSIKEAGQPGYMIDQLRQIPKARWIEMWQRLKSISHY 386 (431)
Q Consensus 315 Rl~DAi~~GCIP--Vii~d~~~lPf~~~ld-w~~fsV~i~~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v~~~ 386 (431)
.+|-.|..|=|| +|..++..+-|-+.-. +.-..+.||.+.+.+ |..++++++.+|-+.++++...
T Consensus 13 ~iFc~Ii~geip~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~-------l~dL~~~e~~~l~~~~~~v~~~ 80 (149)
T 3ksv_A 13 CIFCKIIKGDIPCAKVAETSKALAFMDINPLSRGHMLVIPKEHASC-------LHELGMEDAADVGVLLAKASRA 80 (149)
T ss_dssp CHHHHHHHTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSS-------GGGSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHcCCCCccEEEECCCEEEEECCCCCCCCEEEEEeChhhhh-------hhhCCHHHHHHHHHHHHHHHHH
Confidence 355566666666 6667765444433322 334588889877654 4456788888777766665543
No 37
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=24.17 E-value=1.4e+02 Score=24.89 Aligned_cols=62 Identities=23% Similarity=0.132 Sum_probs=34.1
Q ss_pred HHHHHhccee--EEEeCCcccCcCCCCC-CCceEEEeeccccCCcccHHHHHcCCCHHHHHHHHHHHHhhhh
Q 014048 317 FDAIVSHCVP--VIVSDRIELPFEDEID-YSEFSVFFSIKEAGQPGYMIDQLRQIPKARWIEMWQRLKSISH 385 (431)
Q Consensus 317 ~DAi~~GCIP--Vii~d~~~lPf~~~ld-w~~fsV~i~~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v~~ 385 (431)
|-.|..|-|| ||..++..+-|-+.-. +.-..+.||.+.+.. |..++++++.+|-+.++++..
T Consensus 9 FC~i~~~e~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~-------l~dl~~~~~~~l~~~~~~v~~ 73 (149)
T 3o0m_A 9 FCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVD-------LTDTPPETVAGMAAVGQRIAR 73 (149)
T ss_dssp HHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCS-------TTTSCHHHHHHHHHHHHHHHH
T ss_pred cCccccCCCCCCEEEECCCEEEEEcCCCCCCCeEEEEechhhCC-------HhHCCHHHHHHHHHHHHHHHH
Confidence 3333334344 5666664333333222 223478888776654 344578888888766666544
No 38
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=23.48 E-value=89 Score=29.81 Aligned_cols=136 Identities=12% Similarity=0.082 Sum_probs=69.2
Q ss_pred CCCcEEEEEeeccccCCChHHHHHHHHHHcCCCC-eEEecCCCC--------CC-----ChhhHHhhccCccEEeccCCC
Q 014048 244 VARKTLLFFQGNTIRKDEGKVRAKLAKILTGYDD-VHYERSAPT--------TK-----SIKESTEGMRSSKFCLHPAGD 309 (431)
Q Consensus 244 ~~R~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~~-~~~~~~~~~--------~~-----~~~~~~~~l~~S~FCL~P~Gd 309 (431)
.+++.++.+.|+.. ......-..+++.++..+. +.+..+... .. +..+..+.|+.+...+.+.|.
T Consensus 240 ~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~~~~v~~~~~~~~~~~l~~ad~~v~~~g~ 318 (412)
T 3otg_A 240 TARPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQAALLPHVDLVVHHGGS 318 (412)
T ss_dssp TTSCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCCCTTEEEESCCCHHHHGGGCSEEEESCCH
T ss_pred CCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhccCCCcEEEeCCCCHHHHHhcCcEEEECCch
Confidence 45667777778764 2233333445566655432 222211110 00 111356788889988877663
Q ss_pred CCCchhHHHHHHhcceeEEEeCCc-ccCc-CCCCCCCceEEEeeccccCCcccHHHHHcCC--CHHHHHHHHHHHHhhhh
Q 014048 310 TPSSCRLFDAIVSHCVPVIVSDRI-ELPF-EDEIDYSEFSVFFSIKEAGQPGYMIDQLRQI--PKARWIEMWQRLKSISH 385 (431)
Q Consensus 310 ~~~s~Rl~DAi~~GCIPVii~d~~-~lPf-~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i--~~~~i~~Mr~~l~~v~~ 385 (431)
..+.|||.+| +|||+.+.. +.+. .+.+.-....+.++..++. ...|.+.|+.+ .++..++|.+..+++..
T Consensus 319 ----~t~~Ea~a~G-~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~-~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 319 ----GTTLGALGAG-VPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNIS-PDSVSGAAKRLLAEESYRAGARAVAAEIAA 392 (412)
T ss_dssp ----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHhC-CCEEecCCchhHHHHHHHHHHcCCEEecCcccCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence 3589999999 698885321 0000 0111112346666654321 11233333322 46666667666666554
Q ss_pred c
Q 014048 386 Y 386 (431)
Q Consensus 386 ~ 386 (431)
.
T Consensus 393 ~ 393 (412)
T 3otg_A 393 M 393 (412)
T ss_dssp S
T ss_pred C
Confidence 3
No 39
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=22.48 E-value=1.7e+02 Score=23.85 Aligned_cols=64 Identities=13% Similarity=0.190 Sum_probs=39.0
Q ss_pred hHHHHHHhccee--EEEeCCcccCcCCCCC-CCceEEEeeccccCCcccHHHHHcCCCHHHHHHHHHHHHhhhh
Q 014048 315 RLFDAIVSHCVP--VIVSDRIELPFEDEID-YSEFSVFFSIKEAGQPGYMIDQLRQIPKARWIEMWQRLKSISH 385 (431)
Q Consensus 315 Rl~DAi~~GCIP--Vii~d~~~lPf~~~ld-w~~fsV~i~~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v~~ 385 (431)
-+|-.|..|-|| ||..++..+-|-+.-. +.-..+.||.+.+.+ |..++++++.+|-+.+.++.+
T Consensus 7 CiFC~i~~~e~p~~iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~-------l~dL~~~e~~~l~~~~~~v~~ 73 (138)
T 3p0t_A 7 SIFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDN-------WQDVDSAAFNRVMGVSQLIGK 73 (138)
T ss_dssp HHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCC-------GGGSCHHHHHHHHHHHHHHHH
T ss_pred ChhhHHhcCCCCcCEEEeCCCEEEEecCCCCCCcEEEEEEhHHhCc-------hhhCCHHHHHHHHHHHHHHHH
Confidence 455556666666 6777765444443322 334588889877654 344577888777776666554
No 40
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=22.02 E-value=1.6e+02 Score=24.40 Aligned_cols=61 Identities=13% Similarity=0.109 Sum_probs=33.8
Q ss_pred HHHHHhccee--EEEeCCcccCcCCCC-CCCceEEEeeccccCCcccHHHHHcCCCHHHHHHHHHHHHhhh
Q 014048 317 FDAIVSHCVP--VIVSDRIELPFEDEI-DYSEFSVFFSIKEAGQPGYMIDQLRQIPKARWIEMWQRLKSIS 384 (431)
Q Consensus 317 ~DAi~~GCIP--Vii~d~~~lPf~~~l-dw~~fsV~i~~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v~ 384 (431)
|-.|..|-|| ||..++..+-|-+.- -+.-..+.||...+.+ |..++++++.+|-+.+.++.
T Consensus 3 FC~i~~~e~~~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~-------~~dL~~~e~~~l~~~~~~v~ 66 (149)
T 2eo4_A 3 FCSIINRELEGYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFEN-------YLEADEDTLAELAKVVKLVS 66 (149)
T ss_dssp HHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSS-------GGGSCHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCccEEEECCCEEEEECCCCCCCCeEEEEechhhCC-------HhHCCHHHHHHHHHHHHHHH
Confidence 4445556666 566665433332221 1334578888776654 34457777777766555543
No 41
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=21.65 E-value=1.4e+02 Score=28.71 Aligned_cols=135 Identities=10% Similarity=0.077 Sum_probs=65.6
Q ss_pred CCCcEEEEEeeccccCCChHHHHHHHHHHcCCCCeEE--ecCC-C------C-CCC-----hhhHHhhccCccEEeccCC
Q 014048 244 VARKTLLFFQGNTIRKDEGKVRAKLAKILTGYDDVHY--ERSA-P------T-TKS-----IKESTEGMRSSKFCLHPAG 308 (431)
Q Consensus 244 ~~R~~L~~F~G~~~~~~~~~iR~~L~~~~~~~~~~~~--~~~~-~------~-~~~-----~~~~~~~l~~S~FCL~P~G 308 (431)
.+++.++.+.|+.. ......=..+++.++..+++.+ .-+. . . .++ .....+.|..+...+...|
T Consensus 230 ~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~~~l~~ad~~v~~~G 308 (430)
T 2iyf_A 230 GAEKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAILRQADLFVTHAG 308 (430)
T ss_dssp TCSEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCSCCTTEEEESSCCHHHHHTTCSEEEECCC
T ss_pred CCCCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhccCCCCeEEEecCCHHHHhhccCEEEECCC
Confidence 34566677778775 3233333445666665434322 1111 0 0 001 0112367888886666555
Q ss_pred CCCCchhHHHHHHhcceeEEEeCCc-ccCc-CCCCCCCceEEEeeccccCCcccHHHHHcCC--CHHHHHHHHHHHHhhh
Q 014048 309 DTPSSCRLFDAIVSHCVPVIVSDRI-ELPF-EDEIDYSEFSVFFSIKEAGQPGYMIDQLRQI--PKARWIEMWQRLKSIS 384 (431)
Q Consensus 309 d~~~s~Rl~DAi~~GCIPVii~d~~-~lPf-~~~ldw~~fsV~i~~~d~~~~~~l~~iL~~i--~~~~i~~Mr~~l~~v~ 384 (431)
. ..+.||+.+| +|||+.+.. +.++ ...+......+.++..++. ...|.+.|+.+ .++...+|++..+++.
T Consensus 309 ~----~t~~Ea~~~G-~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~-~~~l~~~i~~ll~~~~~~~~~~~~~~~~~ 382 (430)
T 2iyf_A 309 A----GGSQEGLATA-TPMIAVPQAVDQFGNADMLQGLGVARKLATEEAT-ADLLRETALALVDDPEVARRLRRIQAEMA 382 (430)
T ss_dssp H----HHHHHHHHTT-CCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CC-HHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred c----cHHHHHHHhC-CCEEECCCccchHHHHHHHHHcCCEEEcCCCCCC-HHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 3 4699999999 788887542 1111 1111123456667654321 12243333332 4555555665555544
Q ss_pred h
Q 014048 385 H 385 (431)
Q Consensus 385 ~ 385 (431)
.
T Consensus 383 ~ 383 (430)
T 2iyf_A 383 Q 383 (430)
T ss_dssp H
T ss_pred h
Confidence 3
No 42
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=21.60 E-value=1.5e+02 Score=27.67 Aligned_cols=97 Identities=15% Similarity=0.112 Sum_probs=52.5
Q ss_pred hHHhhccCccEEeccCCCCCCchhHHHHHHhcceeEEEeCCcccCcCCCCCCCceEEEeeccccCCc-ccHHHHHcCCCH
Q 014048 292 ESTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDRIELPFEDEIDYSEFSVFFSIKEAGQP-GYMIDQLRQIPK 370 (431)
Q Consensus 292 ~~~~~l~~S~FCL~P~Gd~~~s~Rl~DAi~~GCIPVii~d~~~lPf~~~ldw~~fsV~i~~~d~~~~-~~l~~iL~~i~~ 370 (431)
+..+.|+.|...+.|.| +. +.||+.+|+ |||+.+..-- ..+.++ ....+.++. +.... ..|.++|. .+
T Consensus 267 ~~~~~~~~ad~~v~~S~----g~-~lEA~a~G~-PvI~~~~~~~-~~~~~~-~g~g~lv~~-d~~~la~~i~~ll~--d~ 335 (376)
T 1v4v_A 267 SMAALMRASLLLVTDSG----GL-QEEGAALGV-PVVVLRNVTE-RPEGLK-AGILKLAGT-DPEGVYRVVKGLLE--NP 335 (376)
T ss_dssp HHHHHHHTEEEEEESCH----HH-HHHHHHTTC-CEEECSSSCS-CHHHHH-HTSEEECCS-CHHHHHHHHHHHHT--CH
T ss_pred HHHHHHHhCcEEEECCc----CH-HHHHHHcCC-CEEeccCCCc-chhhhc-CCceEECCC-CHHHHHHHHHHHHh--Ch
Confidence 56788888988887752 22 779999995 8887654210 011122 123444542 32220 01344444 56
Q ss_pred HHHHHHHHHHHhhhhceEecCCCCCCCHHHHHHHHHHhh
Q 014048 371 ARWIEMWQRLKSISHYYEFQYPPKKEDAVNMVWRQVKNK 409 (431)
Q Consensus 371 ~~i~~Mr~~l~~v~~~~~y~~p~~~~DAf~~~~~~l~~R 409 (431)
+...+|.++ ...| . .++|.+-+++.+..-
T Consensus 336 ~~~~~~~~~----~~~~--~----~~~~~~~i~~~i~~~ 364 (376)
T 1v4v_A 336 EELSRMRKA----KNPY--G----DGKAGLMVARGVAWR 364 (376)
T ss_dssp HHHHHHHHS----CCSS--C----CSCHHHHHHHHHHHH
T ss_pred Hhhhhhccc----CCCC--C----CChHHHHHHHHHHHH
Confidence 667777652 2222 2 346777777766543
No 43
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=20.89 E-value=1.7e+02 Score=24.88 Aligned_cols=52 Identities=12% Similarity=0.160 Sum_probs=30.5
Q ss_pred EEEeCCcccCcCCCCC-CCceEEEeeccccCCcccHHHHHcCCCHHHHHHHHHHHHhhhh
Q 014048 327 VIVSDRIELPFEDEID-YSEFSVFFSIKEAGQPGYMIDQLRQIPKARWIEMWQRLKSISH 385 (431)
Q Consensus 327 Vii~d~~~lPf~~~ld-w~~fsV~i~~~d~~~~~~l~~iL~~i~~~~i~~Mr~~l~~v~~ 385 (431)
||..++..+-|-+.-. +.-..+.||.+.+.. |..++++++.+|-+.+.++.+
T Consensus 44 iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~-------l~dL~~ee~~~l~~~~~~v~~ 96 (161)
T 3lb5_A 44 RVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRN-------LLDADTETLFPVIKAVQKIAK 96 (161)
T ss_dssp EEEECSSEEEEECSSCSSTTCEEEEESSCCSS-------TTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCEEEEECCCcCCCcEEEEEEeeccch-------hhhCCHHHHHHHHHHHHHHHH
Confidence 5666665444433322 334578888776544 345677777777666665544
Done!