Query 014049
Match_columns 431
No_of_seqs 314 out of 1939
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 04:34:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014049.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014049hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p1w_A Rabgdi protein; GDI RAB 100.0 6.5E-52 2.2E-56 412.2 36.9 361 19-426 17-387 (475)
2 1vg0_A RAB proteins geranylger 100.0 1.1E-49 3.8E-54 406.4 38.0 369 21-424 7-508 (650)
3 2bcg_G Secretory pathway GDP d 100.0 7.8E-43 2.7E-47 350.2 35.5 363 20-429 9-374 (453)
4 1d5t_A Guanine nucleotide diss 100.0 6.4E-41 2.2E-45 334.2 34.3 357 20-429 4-363 (433)
5 4dgk_A Phytoene dehydrogenase; 100.0 7.3E-38 2.5E-42 318.4 24.5 346 23-428 2-379 (501)
6 3nrn_A Uncharacterized protein 100.0 3E-27 1E-31 234.9 22.4 317 23-429 1-325 (421)
7 3ka7_A Oxidoreductase; structu 100.0 1.2E-26 4.1E-31 230.7 26.0 316 23-425 1-334 (425)
8 2ivd_A PPO, PPOX, protoporphyr 99.9 2.4E-25 8.1E-30 224.8 23.3 330 22-425 16-375 (478)
9 1s3e_A Amine oxidase [flavin-c 99.9 9.2E-25 3.1E-29 222.9 23.9 294 21-376 3-305 (520)
10 2yg5_A Putrescine oxidase; oxi 99.9 4.8E-24 1.6E-28 213.7 23.8 292 20-376 3-305 (453)
11 1sez_A Protoporphyrinogen oxid 99.9 3.4E-24 1.1E-28 217.8 21.1 342 20-425 11-395 (504)
12 4gde_A UDP-galactopyranose mut 99.9 1.4E-24 4.6E-29 221.1 17.0 319 22-419 10-349 (513)
13 3i6d_A Protoporphyrinogen oxid 99.9 7.1E-24 2.4E-28 213.2 19.9 327 22-424 5-368 (470)
14 3nks_A Protoporphyrinogen oxid 99.9 1.1E-23 3.7E-28 212.5 20.7 327 23-423 3-369 (477)
15 2vvm_A Monoamine oxidase N; FA 99.9 5E-24 1.7E-28 216.1 16.8 295 23-376 40-349 (495)
16 3lov_A Protoporphyrinogen oxid 99.9 3.2E-23 1.1E-27 209.1 22.1 327 21-423 3-364 (475)
17 4dsg_A UDP-galactopyranose mut 99.9 2.3E-22 7.8E-27 202.9 14.8 322 21-424 8-354 (484)
18 1rsg_A FMS1 protein; FAD bindi 99.9 2.3E-21 8E-26 197.4 14.8 278 20-376 6-305 (516)
19 1b37_A Protein (polyamine oxid 99.8 1.1E-19 3.8E-24 183.0 20.0 286 21-377 3-310 (472)
20 2b9w_A Putative aminooxidase; 99.8 3.3E-19 1.1E-23 177.0 22.9 245 21-333 5-253 (424)
21 3k7m_X 6-hydroxy-L-nicotine ox 99.8 4.7E-19 1.6E-23 176.2 20.5 289 23-377 2-297 (431)
22 2iid_A L-amino-acid oxidase; f 99.8 2E-19 6.9E-24 182.3 16.7 283 21-376 32-335 (498)
23 2jae_A L-amino acid oxidase; o 99.8 8.2E-19 2.8E-23 177.4 17.5 302 21-376 10-331 (489)
24 2e1m_A L-glutamate oxidase; L- 99.7 1.9E-16 6.3E-21 153.2 18.9 47 20-66 42-89 (376)
25 1v0j_A UDP-galactopyranose mut 99.7 4.6E-18 1.6E-22 167.3 4.7 298 21-423 6-316 (399)
26 1i8t_A UDP-galactopyranose mut 99.7 2.5E-17 8.5E-22 160.2 6.9 224 22-333 1-230 (367)
27 4gut_A Lysine-specific histone 99.7 1.3E-15 4.3E-20 160.7 19.4 98 271-376 526-624 (776)
28 3hdq_A UDP-galactopyranose mut 99.7 2.6E-16 8.7E-21 153.5 11.7 225 19-333 26-258 (397)
29 2bi7_A UDP-galactopyranose mut 99.7 1E-16 3.5E-21 156.8 8.0 213 21-305 2-223 (384)
30 2xag_A Lysine-specific histone 99.6 6.5E-15 2.2E-19 156.4 17.6 99 270-376 563-670 (852)
31 2z3y_A Lysine-specific histone 99.6 9E-15 3.1E-19 152.8 18.4 100 270-377 392-500 (662)
32 3qj4_A Renalase; FAD/NAD(P)-bi 99.6 3.3E-14 1.1E-18 136.7 20.7 100 271-376 104-204 (342)
33 3ayj_A Pro-enzyme of L-phenyla 99.6 2.1E-15 7.3E-20 156.0 11.8 104 271-376 339-492 (721)
34 3dme_A Conserved exported prot 99.4 5.3E-12 1.8E-16 122.0 14.1 61 271-333 139-204 (369)
35 3dje_A Fructosyl amine: oxygen 99.3 2.2E-11 7.6E-16 120.9 17.2 61 271-333 149-216 (438)
36 1yvv_A Amine oxidase, flavin-c 99.3 1.7E-10 5.8E-15 110.1 20.5 44 22-65 2-45 (336)
37 3nyc_A D-arginine dehydrogenas 99.3 8.3E-11 2.9E-15 114.2 15.6 59 271-333 143-204 (381)
38 3ps9_A TRNA 5-methylaminomethy 99.2 1.1E-10 3.6E-15 122.5 16.7 59 271-332 406-467 (676)
39 4at0_A 3-ketosteroid-delta4-5a 99.2 5.6E-10 1.9E-14 113.1 19.2 42 21-62 40-81 (510)
40 3v76_A Flavoprotein; structura 99.2 7.3E-11 2.5E-15 116.2 12.2 58 271-332 124-181 (417)
41 2gag_B Heterotetrameric sarcos 99.2 2.2E-10 7.7E-15 112.2 15.5 60 271-333 163-225 (405)
42 3kkj_A Amine oxidase, flavin-c 99.2 1.3E-11 4.4E-16 113.4 5.1 46 22-67 2-47 (336)
43 3pvc_A TRNA 5-methylaminomethy 99.2 2.4E-10 8.1E-15 120.0 15.2 59 271-332 401-463 (689)
44 1y56_B Sarcosine oxidase; dehy 99.2 7.7E-10 2.6E-14 107.6 16.9 60 271-333 138-200 (382)
45 2i0z_A NAD(FAD)-utilizing dehy 99.1 2.5E-10 8.4E-15 113.8 12.9 60 271-332 125-185 (447)
46 1qo8_A Flavocytochrome C3 fuma 99.1 1.7E-09 5.7E-14 111.0 19.3 59 272-332 240-306 (566)
47 1y0p_A Fumarate reductase flav 99.1 3.4E-09 1.2E-13 108.8 21.2 60 272-332 245-311 (571)
48 3nlc_A Uncharacterized protein 99.1 6.4E-10 2.2E-14 112.8 13.6 53 279-333 220-272 (549)
49 3da1_A Glycerol-3-phosphate de 99.1 4.3E-10 1.5E-14 115.1 10.6 61 271-333 160-227 (561)
50 1pj5_A N,N-dimethylglycine oxi 99.0 2.8E-09 9.6E-14 114.3 16.4 60 271-333 140-202 (830)
51 3axb_A Putative oxidoreductase 99.0 1.9E-09 6.4E-14 107.3 13.2 60 271-333 170-249 (448)
52 1d4d_A Flavocytochrome C fumar 99.0 2.9E-08 9.9E-13 101.8 20.0 58 273-332 246-311 (572)
53 3oz2_A Digeranylgeranylglycero 98.9 4.7E-10 1.6E-14 109.2 5.0 42 20-61 2-43 (397)
54 3fpz_A Thiazole biosynthetic e 98.8 3.1E-09 1E-13 101.2 4.9 42 22-63 65-108 (326)
55 3itj_A Thioredoxin reductase 1 98.7 6.5E-09 2.2E-13 98.9 4.9 60 5-64 5-68 (338)
56 4fk1_A Putative thioredoxin re 98.7 7.1E-09 2.4E-13 97.6 5.1 42 19-61 3-44 (304)
57 4gcm_A TRXR, thioredoxin reduc 98.7 1E-08 3.6E-13 96.7 5.4 41 22-63 6-46 (312)
58 3lxd_A FAD-dependent pyridine 98.7 2.3E-07 8E-12 91.2 15.2 55 278-334 193-247 (415)
59 3fg2_P Putative rubredoxin red 98.7 5.6E-07 1.9E-11 88.2 17.0 56 277-334 182-237 (404)
60 3urh_A Dihydrolipoyl dehydroge 98.7 1E-08 3.5E-13 103.3 4.2 56 8-64 12-67 (491)
61 4a5l_A Thioredoxin reductase; 98.7 1.7E-08 5.6E-13 95.2 5.3 37 20-56 2-38 (314)
62 1ryi_A Glycine oxidase; flavop 98.6 2E-08 6.9E-13 97.5 5.7 59 271-333 153-214 (382)
63 3cgv_A Geranylgeranyl reductas 98.6 2E-08 6.8E-13 98.0 5.0 42 20-61 2-43 (397)
64 3o0h_A Glutathione reductase; 98.6 1.8E-08 6.1E-13 101.3 4.4 52 279-333 232-283 (484)
65 2gqf_A Hypothetical protein HI 98.6 1.9E-08 6.5E-13 98.5 3.9 43 20-62 2-44 (401)
66 3k30_A Histamine dehydrogenase 98.6 3.9E-08 1.3E-12 103.1 6.4 61 2-63 372-432 (690)
67 4a9w_A Monooxygenase; baeyer-v 98.6 3.1E-08 1.1E-12 94.8 5.2 44 20-63 1-44 (357)
68 2oln_A NIKD protein; flavoprot 98.6 4E-08 1.4E-12 96.0 5.6 59 271-333 142-203 (397)
69 2gjc_A Thiazole biosynthetic e 98.6 6.8E-08 2.3E-12 91.1 6.9 57 6-62 31-107 (326)
70 3rp8_A Flavoprotein monooxygen 98.6 4E-08 1.4E-12 96.4 5.1 49 11-59 12-60 (407)
71 2zbw_A Thioredoxin reductase; 98.6 3.4E-08 1.2E-12 94.0 4.4 45 19-63 2-46 (335)
72 3l8k_A Dihydrolipoyl dehydroge 98.5 3.4E-08 1.1E-12 98.8 4.1 43 21-63 3-45 (466)
73 3cty_A Thioredoxin reductase; 98.5 5.9E-08 2E-12 91.8 5.3 53 9-63 4-56 (319)
74 3ab1_A Ferredoxin--NADP reduct 98.5 4.4E-08 1.5E-12 94.3 4.4 45 19-63 11-55 (360)
75 1rp0_A ARA6, thiazole biosynth 98.5 7.3E-08 2.5E-12 89.8 5.4 41 21-61 38-79 (284)
76 1c0p_A D-amino acid oxidase; a 98.5 8.5E-08 2.9E-12 92.5 6.0 40 20-59 4-43 (363)
77 4ap3_A Steroid monooxygenase; 98.5 5.8E-08 2E-12 98.9 4.9 46 19-64 18-63 (549)
78 2uzz_A N-methyl-L-tryptophan o 98.5 7.5E-08 2.5E-12 93.0 5.2 58 271-332 138-198 (372)
79 3c96_A Flavin-containing monoo 98.5 8.5E-08 2.9E-12 94.2 5.5 43 20-62 2-45 (410)
80 4dna_A Probable glutathione re 98.5 6.2E-08 2.1E-12 96.8 4.3 53 278-333 210-263 (463)
81 3nix_A Flavoprotein/dehydrogen 98.5 9.9E-08 3.4E-12 93.9 5.6 53 279-332 106-160 (421)
82 3jsk_A Cypbp37 protein; octame 98.5 8.9E-08 3E-12 90.8 5.0 41 22-62 79-121 (344)
83 2xdo_A TETX2 protein; tetracyc 98.5 9.4E-08 3.2E-12 93.5 5.4 40 21-60 25-64 (398)
84 3f8d_A Thioredoxin reductase ( 98.5 1.2E-07 3.9E-12 89.5 5.7 40 22-63 15-54 (323)
85 2gv8_A Monooxygenase; FMO, FAD 98.5 1.4E-07 4.7E-12 93.8 5.9 43 21-63 5-49 (447)
86 2gf3_A MSOX, monomeric sarcosi 98.5 1.5E-07 5E-12 91.5 6.0 51 279-333 150-200 (389)
87 2qcu_A Aerobic glycerol-3-phos 98.5 1.3E-07 4.4E-12 95.5 5.7 53 278-333 148-205 (501)
88 3lzw_A Ferredoxin--NADP reduct 98.4 8.7E-08 3E-12 90.8 4.2 43 21-63 6-48 (332)
89 2vdc_G Glutamate synthase [NAD 98.4 1.7E-07 5.6E-12 93.3 6.1 44 19-62 119-162 (456)
90 1mo9_A ORF3; nucleotide bindin 98.4 1.2E-07 4.1E-12 96.2 5.2 45 19-63 40-84 (523)
91 1w4x_A Phenylacetone monooxyge 98.4 1.4E-07 4.8E-12 96.1 5.7 43 20-62 14-56 (542)
92 2q7v_A Thioredoxin reductase; 98.4 1.4E-07 4.8E-12 89.4 5.2 43 20-63 6-48 (325)
93 3lad_A Dihydrolipoamide dehydr 98.4 1.3E-07 4.5E-12 94.7 5.2 41 21-61 2-42 (476)
94 3alj_A 2-methyl-3-hydroxypyrid 98.4 1.6E-07 5.4E-12 91.2 5.6 41 20-60 9-49 (379)
95 3c4n_A Uncharacterized protein 98.4 1.5E-07 5.1E-12 92.3 5.1 40 21-60 35-76 (405)
96 3dk9_A Grase, GR, glutathione 98.4 1.1E-07 3.6E-12 95.5 4.1 43 20-63 18-60 (478)
97 2vou_A 2,6-dihydroxypyridine h 98.4 2.1E-07 7.2E-12 90.9 6.0 38 20-57 3-40 (397)
98 3d1c_A Flavin-containing putat 98.4 1.3E-07 4.5E-12 91.1 4.2 43 20-63 2-45 (369)
99 2cul_A Glucose-inhibited divis 98.4 1.8E-07 6E-12 84.4 4.8 36 21-56 2-37 (232)
100 1o94_A Tmadh, trimethylamine d 98.4 1.9E-07 6.4E-12 98.5 5.5 60 3-63 371-430 (729)
101 3r9u_A Thioredoxin reductase; 98.4 1.6E-07 5.6E-12 88.2 4.6 42 21-63 3-45 (315)
102 2a87_A TRXR, TR, thioredoxin r 98.4 1.8E-07 6.1E-12 89.2 4.7 44 19-63 11-54 (335)
103 1v59_A Dihydrolipoamide dehydr 98.4 1.1E-07 3.6E-12 95.5 3.2 44 20-63 3-46 (478)
104 3i3l_A Alkylhalidase CMLS; fla 98.4 2.8E-07 9.5E-12 94.6 6.0 41 20-60 21-61 (591)
105 3qfa_A Thioredoxin reductase 1 98.4 2.6E-07 8.8E-12 93.6 5.7 44 21-64 31-82 (519)
106 3ic9_A Dihydrolipoamide dehydr 98.4 1.4E-07 4.8E-12 94.9 3.7 41 22-63 8-48 (492)
107 2qae_A Lipoamide, dihydrolipoy 98.4 1.7E-07 5.8E-12 93.7 4.3 42 22-63 2-43 (468)
108 2x3n_A Probable FAD-dependent 98.4 2.8E-07 9.7E-12 90.0 5.6 51 280-332 108-160 (399)
109 3atr_A Conserved archaeal prot 98.4 1.4E-07 4.6E-12 94.0 3.3 51 280-332 101-156 (453)
110 1ojt_A Surface protein; redox- 98.4 1.7E-07 5.8E-12 94.1 4.0 44 20-63 4-47 (482)
111 3pl8_A Pyranose 2-oxidase; sub 98.4 2.9E-07 9.9E-12 95.1 5.7 43 21-63 45-87 (623)
112 1dxl_A Dihydrolipoamide dehydr 98.4 2.4E-07 8.1E-12 92.7 4.9 43 21-63 5-47 (470)
113 1zmd_A Dihydrolipoyl dehydroge 98.4 1.9E-07 6.4E-12 93.6 4.2 44 20-63 4-47 (474)
114 3gwf_A Cyclohexanone monooxyge 98.4 2E-07 6.9E-12 94.7 4.4 45 20-64 6-51 (540)
115 3dgz_A Thioredoxin reductase 2 98.4 2.6E-07 8.9E-12 92.9 5.1 44 21-64 5-56 (488)
116 3uox_A Otemo; baeyer-villiger 98.3 2.6E-07 9E-12 94.0 5.1 44 20-63 7-50 (545)
117 3e1t_A Halogenase; flavoprotei 98.3 3.1E-07 1.1E-11 92.9 5.5 39 20-58 5-43 (512)
118 3fmw_A Oxygenase; mithramycin, 98.3 3.5E-07 1.2E-11 93.5 5.9 38 21-58 48-85 (570)
119 2wdq_A Succinate dehydrogenase 98.3 2.3E-07 7.7E-12 95.4 4.5 53 279-332 143-200 (588)
120 2yqu_A 2-oxoglutarate dehydrog 98.3 2.2E-07 7.6E-12 92.5 4.2 53 278-333 207-259 (455)
121 1vdc_A NTR, NADPH dependent th 98.3 2.2E-07 7.6E-12 88.2 4.0 44 20-63 6-53 (333)
122 2qa1_A PGAE, polyketide oxygen 98.3 4.3E-07 1.5E-11 91.5 6.2 40 20-59 9-48 (500)
123 2bs2_A Quinol-fumarate reducta 98.3 2.4E-07 8.2E-12 96.2 4.4 52 279-332 158-214 (660)
124 2a8x_A Dihydrolipoyl dehydroge 98.3 2.3E-07 7.8E-12 92.7 4.1 42 21-63 2-43 (464)
125 3ihg_A RDME; flavoenzyme, anth 98.3 4.4E-07 1.5E-11 92.3 6.2 39 21-59 4-42 (535)
126 1zk7_A HGII, reductase, mercur 98.3 2.7E-07 9.1E-12 92.3 4.5 43 20-63 2-44 (467)
127 2r9z_A Glutathione amide reduc 98.3 2.6E-07 8.8E-12 92.3 4.4 52 279-333 207-259 (463)
128 2gmh_A Electron transfer flavo 98.3 3.1E-07 1.1E-11 94.3 5.1 39 22-60 35-79 (584)
129 2rgh_A Alpha-glycerophosphate 98.3 4E-07 1.4E-11 93.2 5.8 61 271-333 178-245 (571)
130 3gyx_A Adenylylsulfate reducta 98.3 4.4E-07 1.5E-11 94.2 6.1 52 279-332 166-227 (662)
131 2r0c_A REBC; flavin adenine di 98.3 4E-07 1.4E-11 92.9 5.8 39 22-60 26-64 (549)
132 1trb_A Thioredoxin reductase; 98.3 2.5E-07 8.5E-12 87.3 4.0 43 20-63 3-45 (320)
133 3dgh_A TRXR-1, thioredoxin red 98.3 3.8E-07 1.3E-11 91.6 5.2 53 279-333 227-284 (483)
134 1ges_A Glutathione reductase; 98.3 2.7E-07 9.1E-12 91.8 4.0 52 280-333 209-260 (450)
135 2hqm_A GR, grase, glutathione 98.3 2.7E-07 9.3E-12 92.5 4.1 54 279-333 226-280 (479)
136 2q0l_A TRXR, thioredoxin reduc 98.3 4.5E-07 1.5E-11 85.2 5.4 40 23-63 2-42 (311)
137 1chu_A Protein (L-aspartate ox 98.3 4E-07 1.4E-11 92.6 5.1 41 20-61 6-46 (540)
138 2bry_A NEDD9 interacting prote 98.3 5.1E-07 1.8E-11 90.9 5.8 40 21-60 91-130 (497)
139 3g3e_A D-amino-acid oxidase; F 98.3 3.2E-07 1.1E-11 87.9 3.4 37 23-59 1-43 (351)
140 2qa2_A CABE, polyketide oxygen 98.3 6.7E-07 2.3E-11 90.1 5.8 39 21-59 11-49 (499)
141 1fec_A Trypanothione reductase 98.3 4.4E-07 1.5E-11 91.3 4.3 53 279-333 231-283 (490)
142 2h88_A Succinate dehydrogenase 98.3 4.8E-07 1.6E-11 93.2 4.6 52 279-332 155-211 (621)
143 2eq6_A Pyruvate dehydrogenase 98.3 4.2E-07 1.4E-11 90.7 4.0 42 21-63 5-46 (464)
144 1k0i_A P-hydroxybenzoate hydro 98.3 5.1E-07 1.7E-11 88.0 4.4 36 22-57 2-37 (394)
145 4hb9_A Similarities with proba 98.2 6.5E-07 2.2E-11 87.4 5.2 35 23-57 2-36 (412)
146 3cp8_A TRNA uridine 5-carboxym 98.2 5.8E-07 2E-11 92.0 4.9 45 15-59 14-59 (641)
147 2wpf_A Trypanothione reductase 98.2 4E-07 1.4E-11 91.7 3.6 53 279-333 235-287 (495)
148 3fbs_A Oxidoreductase; structu 98.2 6.6E-07 2.3E-11 83.2 4.7 58 271-335 166-223 (297)
149 1y56_A Hypothetical protein PH 98.2 5.3E-07 1.8E-11 90.7 4.3 42 21-63 107-148 (493)
150 2xve_A Flavin-containing monoo 98.2 7.5E-07 2.6E-11 88.9 5.3 42 23-64 3-50 (464)
151 3ihm_A Styrene monooxygenase A 98.2 7.1E-07 2.4E-11 88.2 5.0 33 23-55 23-55 (430)
152 1ebd_A E3BD, dihydrolipoamide 98.2 5.4E-07 1.8E-11 89.7 4.1 41 22-63 3-43 (455)
153 1lvl_A Dihydrolipoamide dehydr 98.2 4.8E-07 1.6E-11 90.2 3.6 42 21-63 4-45 (458)
154 1ps9_A 2,4-dienoyl-COA reducta 98.2 1.3E-06 4.4E-11 91.3 6.8 42 21-62 372-413 (671)
155 2aqj_A Tryptophan halogenase, 98.2 1E-06 3.5E-11 89.6 5.9 52 279-332 165-216 (538)
156 2dkh_A 3-hydroxybenzoate hydro 98.2 1.9E-06 6.7E-11 89.4 8.0 38 21-58 31-69 (639)
157 3g5s_A Methylenetetrahydrofola 98.2 1.3E-06 4.6E-11 83.4 5.9 39 23-61 2-40 (443)
158 3c4a_A Probable tryptophan hyd 98.2 8.8E-07 3E-11 86.0 4.8 36 23-58 1-38 (381)
159 1xdi_A RV3303C-LPDA; reductase 98.2 5.4E-07 1.8E-11 90.8 3.0 51 280-333 224-274 (499)
160 1fl2_A Alkyl hydroperoxide red 98.2 1.2E-06 3.9E-11 82.3 5.0 39 22-62 1-39 (310)
161 2zxi_A TRNA uridine 5-carboxym 98.2 1.2E-06 4E-11 89.5 5.3 39 21-59 26-65 (637)
162 1onf_A GR, grase, glutathione 98.2 8.5E-07 2.9E-11 89.4 4.2 53 279-333 217-270 (500)
163 3ces_A MNMG, tRNA uridine 5-ca 98.2 9.3E-07 3.2E-11 90.6 4.5 38 21-58 27-65 (651)
164 1kf6_A Fumarate reductase flav 98.2 7.1E-07 2.4E-11 91.9 3.4 52 279-332 134-191 (602)
165 3s5w_A L-ornithine 5-monooxyge 98.1 1.2E-06 4E-11 87.4 4.6 41 21-61 29-74 (463)
166 4b1b_A TRXR, thioredoxin reduc 98.1 1.1E-06 3.8E-11 89.1 4.3 53 278-333 262-314 (542)
167 2e5v_A L-aspartate oxidase; ar 98.1 1.7E-06 5.8E-11 86.5 5.5 51 279-332 119-170 (472)
168 1jnr_A Adenylylsulfate reducta 98.1 1.2E-06 4.2E-11 90.9 4.6 52 279-332 151-212 (643)
169 2ywl_A Thioredoxin reductase r 98.1 1.8E-06 6.2E-11 74.2 4.9 33 23-55 2-34 (180)
170 2gag_A Heterotetrameric sarcos 98.1 1.1E-06 3.8E-11 95.3 3.9 42 21-62 127-168 (965)
171 3t37_A Probable dehydrogenase; 98.1 1.6E-06 5.4E-11 87.9 4.6 35 22-56 17-52 (526)
172 3q9t_A Choline dehydrogenase a 98.1 2E-06 7E-11 87.8 5.3 37 20-56 4-41 (577)
173 1kdg_A CDH, cellobiose dehydro 98.1 2.2E-06 7.4E-11 87.4 5.3 37 21-57 6-42 (546)
174 2pyx_A Tryptophan halogenase; 98.1 2.1E-06 7E-11 87.1 4.4 52 279-332 175-227 (526)
175 2e4g_A Tryptophan halogenase; 98.1 3.1E-06 1.1E-10 86.3 5.6 52 279-332 194-246 (550)
176 1lqt_A FPRA; NADP+ derivative, 98.1 1.7E-06 5.9E-11 86.0 3.6 42 21-62 2-50 (456)
177 3qvp_A Glucose oxidase; oxidor 98.0 3.2E-06 1.1E-10 86.3 5.5 38 18-55 15-53 (583)
178 1hyu_A AHPF, alkyl hydroperoxi 98.0 3.4E-06 1.2E-10 85.4 5.4 40 21-62 211-250 (521)
179 3cgb_A Pyridine nucleotide-dis 98.0 2.6E-06 9.1E-11 85.3 4.6 51 279-333 227-277 (480)
180 1ju2_A HydroxynitrIle lyase; f 98.0 2.4E-06 8.1E-11 86.8 3.9 39 21-60 25-63 (536)
181 3kd9_A Coenzyme A disulfide re 98.0 3.6E-06 1.2E-10 83.5 4.8 41 21-61 2-44 (449)
182 3iwa_A FAD-dependent pyridine 98.0 3E-06 1E-10 84.7 4.0 53 278-333 201-253 (472)
183 2weu_A Tryptophan 5-halogenase 98.0 2.5E-06 8.6E-11 86.1 3.4 52 279-332 173-224 (511)
184 1pn0_A Phenol 2-monooxygenase; 98.0 3.7E-06 1.3E-10 87.6 4.7 45 21-65 7-58 (665)
185 2x8g_A Thioredoxin glutathione 98.0 3.8E-06 1.3E-10 86.6 4.6 35 20-54 105-139 (598)
186 3ics_A Coenzyme A-disulfide re 98.0 4.2E-06 1.4E-10 86.1 4.9 50 279-333 228-277 (588)
187 1gte_A Dihydropyrimidine dehyd 98.0 4.5E-06 1.5E-10 91.2 5.3 41 21-61 186-227 (1025)
188 1cjc_A Protein (adrenodoxin re 98.0 4E-06 1.4E-10 83.5 4.1 42 21-62 5-48 (460)
189 1n4w_A CHOD, cholesterol oxida 97.9 7.3E-06 2.5E-10 82.6 5.3 39 20-58 3-41 (504)
190 3oc4_A Oxidoreductase, pyridin 97.9 7.1E-06 2.4E-10 81.5 4.5 52 278-333 188-239 (452)
191 3h28_A Sulfide-quinone reducta 97.9 6.6E-06 2.3E-10 81.2 4.0 39 23-61 3-43 (430)
192 1q1r_A Putidaredoxin reductase 97.9 1.2E-05 4.2E-10 79.3 5.6 53 279-333 191-245 (431)
193 2cdu_A NADPH oxidase; flavoenz 97.8 9.4E-06 3.2E-10 80.6 4.6 53 278-333 190-242 (452)
194 3fim_B ARYL-alcohol oxidase; A 97.8 8.8E-06 3E-10 82.9 4.2 38 22-59 2-40 (566)
195 1coy_A Cholesterol oxidase; ox 97.8 1.7E-05 5.7E-10 80.0 6.1 38 20-57 9-46 (507)
196 3h8l_A NADH oxidase; membrane 97.8 7E-06 2.4E-10 80.4 3.0 50 279-335 218-267 (409)
197 2v3a_A Rubredoxin reductase; a 97.8 1.3E-05 4.5E-10 77.8 4.9 52 279-333 187-238 (384)
198 1m6i_A Programmed cell death p 97.8 1.5E-05 5.3E-10 80.0 4.9 52 279-333 226-277 (493)
199 2bc0_A NADH oxidase; flavoprot 97.8 1.3E-05 4.4E-10 80.5 4.3 51 279-333 236-286 (490)
200 2jbv_A Choline oxidase; alcoho 97.8 2E-05 6.8E-10 80.2 5.6 39 21-59 12-51 (546)
201 1nhp_A NADH peroxidase; oxidor 97.8 1.5E-05 5.1E-10 79.0 4.4 51 279-333 191-241 (447)
202 1gpe_A Protein (glucose oxidas 97.8 2E-05 7E-10 80.8 5.4 38 20-57 22-60 (587)
203 2gqw_A Ferredoxin reductase; f 97.7 2E-05 6.8E-10 77.2 4.8 49 279-334 187-235 (408)
204 3sx6_A Sulfide-quinone reducta 97.7 2.4E-05 8.3E-10 77.3 4.5 36 22-57 4-42 (437)
205 1xhc_A NADH oxidase /nitrite r 97.7 2.8E-05 9.5E-10 75.0 4.7 46 280-333 184-229 (367)
206 3ef6_A Toluene 1,2-dioxygenase 97.6 3.7E-05 1.3E-09 75.3 5.2 52 279-333 185-236 (410)
207 3ntd_A FAD-dependent pyridine 97.6 2.9E-05 9.9E-10 79.3 4.5 36 23-58 2-39 (565)
208 4b63_A L-ornithine N5 monooxyg 97.5 2.4E-05 8.1E-10 78.8 1.9 43 20-62 37-79 (501)
209 4g6h_A Rotenone-insensitive NA 97.4 9.3E-05 3.2E-09 74.4 4.3 36 21-56 41-76 (502)
210 3klj_A NAD(FAD)-dependent dehy 97.4 0.00015 5.1E-09 70.3 5.2 39 21-59 8-46 (385)
211 3vrd_B FCCB subunit, flavocyto 97.3 0.00011 3.9E-09 71.4 4.1 39 23-61 3-43 (401)
212 4eqs_A Coenzyme A disulfide re 97.3 0.00015 5.1E-09 71.6 4.4 49 278-333 187-235 (437)
213 3hyw_A Sulfide-quinone reducta 97.1 0.00023 8E-09 70.0 3.8 34 24-57 4-39 (430)
214 1nhp_A NADH peroxidase; oxidor 96.3 0.0033 1.1E-07 62.0 5.3 39 22-60 149-187 (447)
215 3klj_A NAD(FAD)-dependent dehy 96.3 0.0031 1.1E-07 60.9 4.9 39 23-61 147-185 (385)
216 3fwz_A Inner membrane protein 96.3 0.0057 2E-07 49.8 5.7 33 23-55 8-40 (140)
217 2g1u_A Hypothetical protein TM 96.2 0.0049 1.7E-07 51.1 4.9 34 22-55 19-52 (155)
218 1lss_A TRK system potassium up 96.1 0.0055 1.9E-07 49.4 4.7 33 23-55 5-37 (140)
219 4gcm_A TRXR, thioredoxin reduc 96.0 0.0053 1.8E-07 57.1 4.7 37 23-59 146-182 (312)
220 1id1_A Putative potassium chan 95.9 0.0088 3E-07 49.4 5.2 34 22-55 3-36 (153)
221 1lvl_A Dihydrolipoamide dehydr 95.8 0.0062 2.1E-07 60.2 4.6 37 23-59 172-208 (458)
222 2v3a_A Rubredoxin reductase; a 95.8 0.0079 2.7E-07 57.9 5.3 39 23-61 146-184 (384)
223 3llv_A Exopolyphosphatase-rela 95.8 0.0091 3.1E-07 48.5 4.8 33 23-55 7-39 (141)
224 2eq6_A Pyruvate dehydrogenase 95.8 0.0078 2.7E-07 59.6 5.0 37 23-59 170-206 (464)
225 1ebd_A E3BD, dihydrolipoamide 95.7 0.0085 2.9E-07 59.2 5.0 37 23-59 171-207 (455)
226 2yqu_A 2-oxoglutarate dehydrog 95.7 0.0087 3E-07 59.1 5.0 37 23-59 168-204 (455)
227 1xhc_A NADH oxidase /nitrite r 95.7 0.0084 2.9E-07 57.4 4.8 37 23-59 144-180 (367)
228 1v59_A Dihydrolipoamide dehydr 95.7 0.0096 3.3E-07 59.1 5.2 38 23-60 184-221 (478)
229 3c85_A Putative glutathione-re 95.6 0.011 3.8E-07 50.4 4.8 35 21-55 38-73 (183)
230 3doj_A AT3G25530, dehydrogenas 95.5 0.012 4E-07 55.0 4.9 50 7-56 5-55 (310)
231 1ryi_A Glycine oxidase; flavop 95.5 0.022 7.4E-07 54.5 6.9 50 10-59 5-54 (382)
232 3ic5_A Putative saccharopine d 95.5 0.014 4.9E-07 45.3 4.6 33 23-55 6-39 (118)
233 2gqw_A Ferredoxin reductase; f 95.5 0.013 4.5E-07 56.9 5.3 38 23-60 146-183 (408)
234 1ges_A Glutathione reductase; 95.4 0.012 4.2E-07 57.9 5.0 37 23-59 168-204 (450)
235 4a5l_A Thioredoxin reductase; 95.4 0.012 4E-07 54.6 4.6 35 23-57 153-187 (314)
236 4e12_A Diketoreductase; oxidor 95.4 0.016 5.5E-07 53.3 5.2 36 21-56 3-38 (283)
237 2r9z_A Glutathione amide reduc 95.2 0.016 5.6E-07 57.3 5.0 37 23-59 167-203 (463)
238 3cgb_A Pyridine nucleotide-dis 95.1 0.012 4.2E-07 58.5 3.7 37 23-59 187-223 (480)
239 3ado_A Lambda-crystallin; L-gu 95.0 0.02 6.9E-07 53.4 4.7 34 23-56 7-40 (319)
240 4e21_A 6-phosphogluconate dehy 95.0 0.02 6.9E-07 54.5 4.8 39 17-55 17-55 (358)
241 3vtf_A UDP-glucose 6-dehydroge 95.0 0.024 8.2E-07 55.3 5.4 35 21-55 20-54 (444)
242 2bc0_A NADH oxidase; flavoprot 95.0 0.02 6.8E-07 57.1 4.9 37 23-59 195-231 (490)
243 1f0y_A HCDH, L-3-hydroxyacyl-C 95.0 0.025 8.4E-07 52.5 5.2 33 23-55 16-48 (302)
244 1zmd_A Dihydrolipoyl dehydroge 95.0 0.022 7.6E-07 56.5 5.2 37 23-59 179-215 (474)
245 2a8x_A Dihydrolipoyl dehydroge 94.9 0.022 7.5E-07 56.3 5.0 37 23-59 172-208 (464)
246 3ic9_A Dihydrolipoamide dehydr 94.9 0.025 8.4E-07 56.5 5.4 38 23-60 175-212 (492)
247 2oln_A NIKD protein; flavoprot 94.9 0.065 2.2E-06 51.5 8.2 38 21-58 3-40 (397)
248 1ojt_A Surface protein; redox- 94.9 0.018 6.3E-07 57.2 4.4 37 23-59 186-222 (482)
249 3k6j_A Protein F01G10.3, confi 94.9 0.029 1E-06 55.0 5.6 34 23-56 55-88 (460)
250 1pzg_A LDH, lactate dehydrogen 94.9 0.026 8.9E-07 53.2 5.1 38 18-55 5-43 (331)
251 3ef6_A Toluene 1,2-dioxygenase 94.8 0.024 8.2E-07 55.1 5.0 38 23-60 144-181 (410)
252 2hmt_A YUAA protein; RCK, KTN, 94.8 0.024 8E-07 45.8 4.2 33 23-55 7-39 (144)
253 2uzz_A N-methyl-L-tryptophan o 94.8 0.058 2E-06 51.2 7.5 42 22-63 2-43 (372)
254 3gwf_A Cyclohexanone monooxyge 94.8 0.032 1.1E-06 56.4 5.9 35 22-56 178-212 (540)
255 3lk7_A UDP-N-acetylmuramoylala 94.8 0.027 9.2E-07 55.5 5.2 35 22-56 9-43 (451)
256 3kd9_A Coenzyme A disulfide re 94.7 0.028 9.7E-07 55.2 5.3 37 24-60 150-186 (449)
257 1zcj_A Peroxisomal bifunctiona 94.7 0.036 1.2E-06 54.7 6.0 33 23-55 38-70 (463)
258 3dtt_A NADP oxidoreductase; st 94.7 0.028 9.6E-07 50.4 4.8 37 19-55 16-52 (245)
259 2cul_A Glucose-inhibited divis 94.7 0.077 2.6E-06 47.0 7.6 51 279-332 68-119 (232)
260 1dxl_A Dihydrolipoamide dehydr 94.6 0.019 6.7E-07 56.7 3.8 37 23-59 178-214 (470)
261 3d1c_A Flavin-containing putat 94.6 0.026 8.8E-07 53.6 4.6 36 23-58 167-202 (369)
262 2q0l_A TRXR, thioredoxin reduc 94.6 0.03 1E-06 51.8 4.8 36 23-58 144-179 (311)
263 2hqm_A GR, grase, glutathione 94.6 0.029 9.9E-07 55.7 5.0 37 23-59 186-222 (479)
264 3l4b_C TRKA K+ channel protien 94.6 0.026 9E-07 49.5 4.1 32 24-55 2-33 (218)
265 3k96_A Glycerol-3-phosphate de 94.5 0.033 1.1E-06 53.0 5.0 35 21-55 28-62 (356)
266 2y0c_A BCEC, UDP-glucose dehyd 94.5 0.03 1E-06 55.6 4.8 34 22-55 8-41 (478)
267 1bg6_A N-(1-D-carboxylethyl)-L 94.5 0.031 1.1E-06 53.0 4.8 34 22-55 4-37 (359)
268 1onf_A GR, grase, glutathione 94.5 0.031 1E-06 55.9 4.9 37 23-59 177-213 (500)
269 3fg2_P Putative rubredoxin red 94.5 0.037 1.3E-06 53.5 5.3 39 23-61 143-181 (404)
270 2dpo_A L-gulonate 3-dehydrogen 94.4 0.034 1.2E-06 52.0 4.8 34 23-56 7-40 (319)
271 2raf_A Putative dinucleotide-b 94.4 0.043 1.5E-06 47.9 5.0 34 23-56 20-53 (209)
272 1fl2_A Alkyl hydroperoxide red 94.4 0.034 1.2E-06 51.4 4.6 35 23-57 145-179 (310)
273 1zk7_A HGII, reductase, mercur 94.3 0.037 1.3E-06 54.7 5.1 37 23-59 177-213 (467)
274 4eqs_A Coenzyme A disulfide re 94.3 0.03 1E-06 54.9 4.4 38 24-61 149-186 (437)
275 3uox_A Otemo; baeyer-villiger 94.3 0.038 1.3E-06 55.8 5.2 36 22-57 185-220 (545)
276 3lxd_A FAD-dependent pyridine 94.3 0.042 1.4E-06 53.4 5.3 39 23-61 153-191 (415)
277 2qae_A Lipoamide, dihydrolipoy 94.3 0.038 1.3E-06 54.7 5.0 37 23-59 175-211 (468)
278 2izz_A Pyrroline-5-carboxylate 94.3 0.038 1.3E-06 51.8 4.7 40 16-55 16-59 (322)
279 3ghy_A Ketopantoate reductase 94.3 0.039 1.3E-06 52.0 4.9 32 23-54 4-35 (335)
280 2xve_A Flavin-containing monoo 94.2 0.037 1.3E-06 54.7 4.8 37 23-59 198-234 (464)
281 3cgv_A Geranylgeranyl reductas 94.2 0.073 2.5E-06 50.9 6.8 52 279-332 102-156 (397)
282 2gf3_A MSOX, monomeric sarcosi 94.2 0.088 3E-06 50.2 7.3 37 22-58 3-39 (389)
283 3i83_A 2-dehydropantoate 2-red 94.2 0.043 1.5E-06 51.3 4.9 33 23-55 3-35 (320)
284 1q1r_A Putidaredoxin reductase 94.1 0.11 3.8E-06 50.7 8.0 37 22-58 4-42 (431)
285 1vdc_A NTR, NADPH dependent th 94.1 0.04 1.4E-06 51.5 4.6 36 23-58 160-195 (333)
286 1ks9_A KPA reductase;, 2-dehyd 94.1 0.047 1.6E-06 50.0 5.0 33 24-56 2-34 (291)
287 4ap3_A Steroid monooxygenase; 94.1 0.041 1.4E-06 55.6 4.9 36 22-57 191-226 (549)
288 3g0o_A 3-hydroxyisobutyrate de 94.1 0.046 1.6E-06 50.7 4.8 34 22-55 7-40 (303)
289 2q7v_A Thioredoxin reductase; 94.1 0.043 1.5E-06 51.1 4.7 36 23-58 153-188 (325)
290 4a7p_A UDP-glucose dehydrogena 94.1 0.047 1.6E-06 53.6 5.1 35 22-56 8-42 (446)
291 3hn2_A 2-dehydropantoate 2-red 94.1 0.044 1.5E-06 51.1 4.7 33 23-55 3-35 (312)
292 1trb_A Thioredoxin reductase; 94.1 0.042 1.4E-06 51.0 4.6 36 23-58 146-181 (320)
293 2ew2_A 2-dehydropantoate 2-red 94.0 0.045 1.5E-06 50.8 4.8 33 23-55 4-36 (316)
294 2a87_A TRXR, TR, thioredoxin r 94.0 0.043 1.5E-06 51.4 4.6 36 23-58 156-191 (335)
295 2x5o_A UDP-N-acetylmuramoylala 94.0 0.036 1.2E-06 54.4 4.1 37 23-59 6-42 (439)
296 3g79_A NDP-N-acetyl-D-galactos 94.0 0.053 1.8E-06 53.6 5.2 34 23-56 19-54 (478)
297 2gv8_A Monooxygenase; FMO, FAD 93.9 0.046 1.6E-06 53.6 4.8 35 23-57 213-248 (447)
298 2zbw_A Thioredoxin reductase; 93.9 0.043 1.5E-06 51.3 4.4 37 23-59 153-189 (335)
299 3ntd_A FAD-dependent pyridine 93.9 0.048 1.6E-06 55.3 5.0 36 24-59 153-188 (565)
300 3urh_A Dihydrolipoyl dehydroge 93.9 0.048 1.6E-06 54.3 4.9 38 23-60 199-236 (491)
301 3gg2_A Sugar dehydrogenase, UD 93.9 0.048 1.7E-06 53.6 4.8 33 23-55 3-35 (450)
302 3qha_A Putative oxidoreductase 93.8 0.05 1.7E-06 50.3 4.5 35 22-56 15-49 (296)
303 3l8k_A Dihydrolipoyl dehydroge 93.8 0.083 2.8E-06 52.2 6.3 39 23-61 173-211 (466)
304 2weu_A Tryptophan 5-halogenase 93.8 0.16 5.5E-06 50.7 8.5 34 23-56 3-39 (511)
305 3atr_A Conserved archaeal prot 93.8 0.13 4.4E-06 50.5 7.7 37 21-57 5-41 (453)
306 2e4g_A Tryptophan halogenase; 93.8 0.14 4.9E-06 51.6 8.2 37 20-56 23-62 (550)
307 3dk9_A Grase, GR, glutathione 93.7 0.056 1.9E-06 53.6 5.0 37 23-59 188-224 (478)
308 3dfz_A SIRC, precorrin-2 dehyd 93.7 0.065 2.2E-06 47.2 4.7 35 20-54 29-63 (223)
309 3qsg_A NAD-binding phosphogluc 93.6 0.048 1.6E-06 50.9 4.1 49 7-55 7-58 (312)
310 2pv7_A T-protein [includes: ch 93.6 0.088 3E-06 48.7 5.8 48 4-56 8-56 (298)
311 3cty_A Thioredoxin reductase; 93.6 0.054 1.8E-06 50.3 4.4 36 23-58 156-191 (319)
312 2rgh_A Alpha-glycerophosphate 93.6 0.14 4.7E-06 52.0 7.7 40 21-60 31-70 (571)
313 3s5w_A L-ornithine 5-monooxyge 93.5 0.044 1.5E-06 53.9 3.9 36 22-57 227-264 (463)
314 2x3n_A Probable FAD-dependent 93.5 0.12 4.1E-06 49.6 6.9 37 21-57 5-41 (399)
315 1mv8_A GMD, GDP-mannose 6-dehy 93.5 0.059 2E-06 52.8 4.6 32 24-55 2-33 (436)
316 2wpf_A Trypanothione reductase 93.4 0.19 6.4E-06 50.0 8.3 44 20-63 5-57 (495)
317 1fec_A Trypanothione reductase 93.4 0.18 6.1E-06 50.1 8.1 43 21-63 2-53 (490)
318 1mo9_A ORF3; nucleotide bindin 93.4 0.068 2.3E-06 53.7 5.1 38 23-60 215-252 (523)
319 4huj_A Uncharacterized protein 93.4 0.04 1.4E-06 48.5 2.9 36 20-55 21-57 (220)
320 3itj_A Thioredoxin reductase 1 93.4 0.064 2.2E-06 50.0 4.6 37 23-59 174-210 (338)
321 3iwa_A FAD-dependent pyridine 93.4 0.16 5.6E-06 50.0 7.8 37 22-58 3-41 (472)
322 1zej_A HBD-9, 3-hydroxyacyl-CO 93.4 0.07 2.4E-06 49.2 4.7 33 22-55 12-44 (293)
323 3mog_A Probable 3-hydroxybutyr 93.4 0.072 2.5E-06 52.8 5.0 35 22-56 5-39 (483)
324 2cdu_A NADPH oxidase; flavoenz 93.2 0.23 7.9E-06 48.6 8.5 37 23-59 1-39 (452)
325 3e8x_A Putative NAD-dependent 93.2 0.074 2.5E-06 47.0 4.5 34 22-55 21-55 (236)
326 3ab1_A Ferredoxin--NADP reduct 93.2 0.071 2.4E-06 50.5 4.6 37 23-59 164-200 (360)
327 3lad_A Dihydrolipoamide dehydr 93.2 0.075 2.6E-06 52.6 5.0 37 23-59 181-217 (476)
328 2gmh_A Electron transfer flavo 93.2 0.19 6.5E-06 51.2 8.0 53 279-332 144-211 (584)
329 3hwr_A 2-dehydropantoate 2-red 93.2 0.075 2.6E-06 49.6 4.7 33 22-55 19-51 (318)
330 3nix_A Flavoprotein/dehydrogen 93.2 0.17 5.9E-06 48.8 7.5 38 21-58 4-41 (421)
331 2uyy_A N-PAC protein; long-cha 93.1 0.097 3.3E-06 48.7 5.4 34 23-56 31-64 (316)
332 3g17_A Similar to 2-dehydropan 93.1 0.058 2E-06 49.8 3.7 33 23-55 3-35 (294)
333 4dio_A NAD(P) transhydrogenase 93.1 0.082 2.8E-06 50.8 4.8 34 23-56 191-224 (405)
334 3pid_A UDP-glucose 6-dehydroge 93.1 0.077 2.6E-06 51.7 4.7 33 23-56 37-69 (432)
335 3ics_A Coenzyme A-disulfide re 93.1 0.088 3E-06 53.7 5.4 38 23-60 188-225 (588)
336 2x8g_A Thioredoxin glutathione 93.1 0.071 2.4E-06 54.5 4.7 32 23-54 287-318 (598)
337 1kyq_A Met8P, siroheme biosynt 93.0 0.047 1.6E-06 49.7 2.9 36 21-56 12-47 (274)
338 3o0h_A Glutathione reductase; 93.0 0.21 7.2E-06 49.5 7.9 42 21-63 25-66 (484)
339 2ewd_A Lactate dehydrogenase,; 93.0 0.084 2.9E-06 49.3 4.7 33 23-55 5-38 (317)
340 1m6i_A Programmed cell death p 93.0 0.25 8.7E-06 49.0 8.4 39 20-58 9-49 (493)
341 2vns_A Metalloreductase steap3 92.9 0.098 3.4E-06 45.8 4.7 33 23-55 29-61 (215)
342 1z82_A Glycerol-3-phosphate de 92.9 0.09 3.1E-06 49.4 4.8 32 23-54 15-46 (335)
343 1hyu_A AHPF, alkyl hydroperoxi 92.9 0.067 2.3E-06 53.7 4.1 36 23-58 356-391 (521)
344 4g65_A TRK system potassium up 92.9 0.059 2E-06 53.2 3.6 35 22-56 3-37 (461)
345 3pef_A 6-phosphogluconate dehy 92.9 0.089 3E-06 48.3 4.6 33 24-56 3-35 (287)
346 2e1m_B L-glutamate oxidase; L- 92.8 0.043 1.5E-06 43.9 2.0 52 323-376 4-56 (130)
347 3tl2_A Malate dehydrogenase; c 92.8 0.11 3.6E-06 48.5 5.0 37 18-54 4-41 (315)
348 4dll_A 2-hydroxy-3-oxopropiona 92.8 0.1 3.4E-06 48.8 4.9 33 23-55 32-64 (320)
349 2ywl_A Thioredoxin reductase r 92.8 0.28 9.7E-06 41.1 7.4 50 279-333 56-105 (180)
350 3eag_A UDP-N-acetylmuramate:L- 92.8 0.11 3.6E-06 48.8 5.0 34 23-56 5-39 (326)
351 3ojo_A CAP5O; rossmann fold, c 92.8 0.088 3E-06 51.3 4.6 34 23-56 12-45 (431)
352 1evy_A Glycerol-3-phosphate de 92.7 0.071 2.4E-06 50.8 3.8 32 24-55 17-48 (366)
353 3ggo_A Prephenate dehydrogenas 92.7 0.12 4.2E-06 48.1 5.4 33 23-55 34-68 (314)
354 3gpi_A NAD-dependent epimerase 92.7 0.11 3.8E-06 47.3 5.1 34 23-56 4-37 (286)
355 2qcu_A Aerobic glycerol-3-phos 92.7 0.25 8.6E-06 49.2 8.0 39 21-59 2-40 (501)
356 4dna_A Probable glutathione re 92.7 0.22 7.4E-06 49.0 7.4 42 21-63 4-45 (463)
357 3c4n_A Uncharacterized protein 92.6 0.067 2.3E-06 51.7 3.5 59 271-333 161-231 (405)
358 3f8d_A Thioredoxin reductase ( 92.6 0.1 3.5E-06 48.2 4.6 37 23-59 155-191 (323)
359 3e1t_A Halogenase; flavoprotei 92.6 0.26 9E-06 49.2 7.9 52 279-332 111-166 (512)
360 3l6d_A Putative oxidoreductase 92.5 0.13 4.4E-06 47.7 5.3 33 23-55 10-42 (306)
361 3dfu_A Uncharacterized protein 92.5 0.053 1.8E-06 48.0 2.4 32 23-54 7-38 (232)
362 2zyd_A 6-phosphogluconate dehy 92.5 0.1 3.5E-06 51.7 4.8 36 20-55 13-48 (480)
363 1t2d_A LDH-P, L-lactate dehydr 92.5 0.12 4.3E-06 48.2 5.1 33 23-55 5-38 (322)
364 3pdu_A 3-hydroxyisobutyrate de 92.5 0.086 2.9E-06 48.4 3.9 33 24-56 3-35 (287)
365 1lld_A L-lactate dehydrogenase 92.4 0.11 3.8E-06 48.4 4.7 33 23-55 8-42 (319)
366 2qyt_A 2-dehydropantoate 2-red 92.4 0.079 2.7E-06 49.2 3.6 31 23-53 9-45 (317)
367 2q3e_A UDP-glucose 6-dehydroge 92.4 0.097 3.3E-06 51.7 4.4 33 23-55 6-40 (467)
368 2vdc_G Glutamate synthase [NAD 92.4 0.12 4E-06 51.0 5.0 36 22-57 264-300 (456)
369 1xdi_A RV3303C-LPDA; reductase 92.4 0.3 1E-05 48.5 8.1 42 22-64 2-46 (499)
370 3p2y_A Alanine dehydrogenase/p 92.3 0.089 3.1E-06 50.1 3.8 33 23-55 185-217 (381)
371 2aqj_A Tryptophan halogenase, 92.3 0.29 1E-05 49.1 7.9 38 20-57 3-43 (538)
372 1x0v_A GPD-C, GPDH-C, glycerol 92.3 0.073 2.5E-06 50.4 3.3 35 22-56 8-49 (354)
373 2zxi_A TRNA uridine 5-carboxym 92.3 0.29 1E-05 49.9 7.8 51 279-332 123-174 (637)
374 2h78_A Hibadh, 3-hydroxyisobut 92.3 0.12 4E-06 47.8 4.6 33 23-55 4-36 (302)
375 3r9u_A Thioredoxin reductase; 92.2 0.12 4.1E-06 47.6 4.6 35 23-57 148-182 (315)
376 3oj0_A Glutr, glutamyl-tRNA re 92.2 0.068 2.3E-06 43.4 2.6 33 23-55 22-54 (144)
377 2wdq_A Succinate dehydrogenase 92.2 0.33 1.1E-05 49.4 8.2 42 20-61 5-46 (588)
378 1jay_A Coenzyme F420H2:NADP+ o 92.2 0.13 4.4E-06 44.7 4.5 32 24-55 2-34 (212)
379 3dgz_A Thioredoxin reductase 2 92.2 0.14 4.8E-06 50.8 5.3 33 23-55 186-218 (488)
380 2bs2_A Quinol-fumarate reducta 92.2 0.32 1.1E-05 50.2 8.1 42 20-61 3-44 (660)
381 2h88_A Succinate dehydrogenase 92.1 0.27 9.1E-06 50.4 7.4 42 20-61 16-57 (621)
382 4gwg_A 6-phosphogluconate dehy 92.1 0.14 4.8E-06 50.6 5.1 34 22-55 4-37 (484)
383 1dlj_A UDP-glucose dehydrogena 92.1 0.11 3.7E-06 50.3 4.3 31 24-55 2-32 (402)
384 3l9w_A Glutathione-regulated p 92.1 0.13 4.4E-06 49.9 4.8 34 23-56 5-38 (413)
385 3qfa_A Thioredoxin reductase 1 92.1 0.14 4.9E-06 51.2 5.3 32 23-54 211-242 (519)
386 2pzm_A Putative nucleotide sug 92.1 0.16 5.5E-06 47.4 5.4 49 7-55 5-54 (330)
387 3ego_A Probable 2-dehydropanto 92.1 0.13 4.5E-06 47.7 4.7 32 23-55 3-34 (307)
388 2gqf_A Hypothetical protein HI 92.0 0.35 1.2E-05 46.6 7.9 60 271-332 101-162 (401)
389 1txg_A Glycerol-3-phosphate de 92.0 0.099 3.4E-06 49.0 3.9 30 24-53 2-31 (335)
390 3lzw_A Ferredoxin--NADP reduct 92.0 0.14 4.7E-06 47.5 4.7 37 23-59 155-191 (332)
391 2hjr_A Malate dehydrogenase; m 92.0 0.15 5.2E-06 47.8 5.0 33 23-55 15-48 (328)
392 3i3l_A Alkylhalidase CMLS; fla 91.9 0.25 8.5E-06 50.4 6.8 52 279-332 128-182 (591)
393 3cky_A 2-hydroxymethyl glutara 91.9 0.14 4.8E-06 47.1 4.7 33 23-55 5-37 (301)
394 3ktd_A Prephenate dehydrogenas 91.9 0.17 5.7E-06 47.7 5.2 33 23-55 9-41 (341)
395 2pyx_A Tryptophan halogenase; 91.8 0.44 1.5E-05 47.7 8.6 37 21-57 6-54 (526)
396 2o3j_A UDP-glucose 6-dehydroge 91.8 0.14 4.8E-06 50.8 4.8 33 23-55 10-44 (481)
397 2v6b_A L-LDH, L-lactate dehydr 91.8 0.15 5.1E-06 47.2 4.7 32 24-55 2-35 (304)
398 3oc4_A Oxidoreductase, pyridin 91.8 0.4 1.4E-05 46.9 8.1 37 23-59 3-41 (452)
399 1k0i_A P-hydroxybenzoate hydro 91.7 0.22 7.5E-06 47.6 6.0 55 279-335 103-161 (394)
400 2rcy_A Pyrroline carboxylate r 91.6 0.16 5.4E-06 45.7 4.6 35 22-56 4-42 (262)
401 3fbs_A Oxidoreductase; structu 91.6 0.15 5.3E-06 46.3 4.5 33 23-56 142-174 (297)
402 3k31_A Enoyl-(acyl-carrier-pro 91.6 0.25 8.4E-06 45.5 5.9 52 4-55 12-66 (296)
403 1rp0_A ARA6, thiazole biosynth 91.5 0.42 1.4E-05 43.6 7.4 53 278-332 118-185 (284)
404 2qa1_A PGAE, polyketide oxygen 91.4 0.41 1.4E-05 47.7 7.8 54 279-335 106-163 (500)
405 4b1b_A TRXR, thioredoxin reduc 91.4 0.2 6.7E-06 50.5 5.4 36 23-58 224-259 (542)
406 3ces_A MNMG, tRNA uridine 5-ca 91.4 0.35 1.2E-05 49.6 7.2 51 279-332 124-175 (651)
407 4ezb_A Uncharacterized conserv 91.4 0.15 5.1E-06 47.6 4.2 33 23-55 25-58 (317)
408 2qa2_A CABE, polyketide oxygen 91.3 0.42 1.4E-05 47.5 7.7 54 279-335 107-164 (499)
409 1guz_A Malate dehydrogenase; o 91.2 0.19 6.6E-06 46.6 4.8 32 24-55 2-35 (310)
410 3dgh_A TRXR-1, thioredoxin red 91.1 0.21 7.2E-06 49.5 5.3 33 23-55 188-220 (483)
411 2iz1_A 6-phosphogluconate dehy 91.1 0.21 7.2E-06 49.4 5.2 34 22-55 5-38 (474)
412 1cjc_A Protein (adrenodoxin re 91.0 0.17 5.8E-06 49.9 4.4 35 23-57 146-201 (460)
413 1x13_A NAD(P) transhydrogenase 91.0 0.18 6.2E-06 48.7 4.5 33 23-55 173-205 (401)
414 2f1k_A Prephenate dehydrogenas 91.0 0.21 7.2E-06 45.4 4.8 32 24-55 2-33 (279)
415 2gf2_A Hibadh, 3-hydroxyisobut 90.8 0.22 7.4E-06 45.7 4.7 32 24-55 2-33 (296)
416 4ffl_A PYLC; amino acid, biosy 90.8 0.22 7.6E-06 47.2 4.9 33 24-56 3-35 (363)
417 3gvi_A Malate dehydrogenase; N 90.8 0.24 8.2E-06 46.3 5.0 35 21-55 6-41 (324)
418 3tri_A Pyrroline-5-carboxylate 90.8 0.26 8.7E-06 45.1 5.1 34 22-55 3-39 (280)
419 3ius_A Uncharacterized conserv 90.8 0.2 6.9E-06 45.5 4.4 33 23-55 6-38 (286)
420 1w6u_A 2,4-dienoyl-COA reducta 90.7 0.4 1.4E-05 43.9 6.5 47 9-55 13-60 (302)
421 2wtb_A MFP2, fatty acid multif 90.7 0.19 6.5E-06 52.5 4.6 33 23-55 313-345 (725)
422 1yqg_A Pyrroline-5-carboxylate 90.7 0.19 6.6E-06 45.2 4.1 32 24-55 2-34 (263)
423 3orf_A Dihydropteridine reduct 90.6 0.25 8.4E-06 44.2 4.8 47 8-56 10-57 (251)
424 1n4w_A CHOD, cholesterol oxida 90.6 0.31 1.1E-05 48.5 6.0 56 278-333 220-283 (504)
425 1nyt_A Shikimate 5-dehydrogena 90.6 0.3 1E-05 44.4 5.3 33 23-55 120-152 (271)
426 2p4q_A 6-phosphogluconate dehy 90.6 0.23 8E-06 49.3 4.9 33 23-55 11-43 (497)
427 1l7d_A Nicotinamide nucleotide 90.6 0.23 8E-06 47.6 4.8 33 23-55 173-205 (384)
428 2pgd_A 6-phosphogluconate dehy 90.5 0.24 8.3E-06 49.1 5.0 33 23-55 3-35 (482)
429 2aef_A Calcium-gated potassium 90.5 0.12 4.1E-06 45.7 2.6 32 23-55 10-41 (234)
430 3c24_A Putative oxidoreductase 90.3 0.3 1E-05 44.6 5.2 33 23-55 12-45 (286)
431 2eez_A Alanine dehydrogenase; 90.2 0.25 8.5E-06 47.1 4.7 33 23-55 167-199 (369)
432 3ew7_A LMO0794 protein; Q8Y8U8 90.2 0.29 9.8E-06 42.4 4.8 32 24-55 2-34 (221)
433 1vpd_A Tartronate semialdehyde 90.2 0.25 8.5E-06 45.4 4.6 33 23-55 6-38 (299)
434 1yj8_A Glycerol-3-phosphate de 90.2 0.18 6.2E-06 48.2 3.7 33 24-56 23-62 (375)
435 1a5z_A L-lactate dehydrogenase 90.1 0.22 7.5E-06 46.4 4.1 32 24-55 2-35 (319)
436 3p7m_A Malate dehydrogenase; p 90.1 0.32 1.1E-05 45.4 5.1 34 22-55 5-39 (321)
437 1o94_A Tmadh, trimethylamine d 90.1 0.21 7.3E-06 52.2 4.4 36 23-59 529-566 (729)
438 2gag_A Heterotetrameric sarcos 90.0 0.15 5.1E-06 55.2 3.3 37 23-59 285-321 (965)
439 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.0 0.27 9.1E-06 48.7 4.8 32 24-55 3-34 (478)
440 4b4o_A Epimerase family protei 90.0 0.32 1.1E-05 44.5 5.2 35 24-58 2-37 (298)
441 1pjc_A Protein (L-alanine dehy 90.0 0.26 9E-06 46.8 4.7 33 23-55 168-200 (361)
442 3pqe_A L-LDH, L-lactate dehydr 90.0 0.28 9.5E-06 45.9 4.7 33 22-54 5-39 (326)
443 1kf6_A Fumarate reductase flav 90.0 0.52 1.8E-05 48.1 7.1 40 21-60 4-45 (602)
444 1hdo_A Biliverdin IX beta redu 89.9 0.32 1.1E-05 41.5 4.8 33 23-55 4-37 (206)
445 2g5c_A Prephenate dehydrogenas 89.9 0.28 9.7E-06 44.6 4.7 32 24-55 3-36 (281)
446 1pjq_A CYSG, siroheme synthase 89.9 0.25 8.4E-06 48.7 4.5 34 21-54 11-44 (457)
447 3c7a_A Octopine dehydrogenase; 89.9 0.17 5.7E-06 48.9 3.2 30 23-52 3-33 (404)
448 1y6j_A L-lactate dehydrogenase 89.9 0.3 1E-05 45.5 4.9 34 22-55 7-42 (318)
449 4id9_A Short-chain dehydrogena 89.9 0.29 9.8E-06 45.9 4.8 36 22-57 19-55 (347)
450 4a9w_A Monooxygenase; baeyer-v 89.9 0.66 2.3E-05 43.2 7.3 51 279-332 76-126 (357)
451 2a9f_A Putative malic enzyme ( 89.8 0.28 9.5E-06 46.7 4.5 34 22-55 188-222 (398)
452 3h2s_A Putative NADH-flavin re 89.7 0.32 1.1E-05 42.3 4.7 32 24-55 2-34 (224)
453 1wdk_A Fatty oxidation complex 89.7 0.22 7.5E-06 51.9 4.1 33 23-55 315-347 (715)
454 3dhn_A NAD-dependent epimerase 89.6 0.25 8.6E-06 43.1 3.9 33 23-55 5-38 (227)
455 1ur5_A Malate dehydrogenase; o 89.6 0.32 1.1E-05 45.1 4.8 33 23-55 3-36 (309)
456 1edz_A 5,10-methylenetetrahydr 89.5 0.3 1E-05 45.3 4.4 43 21-63 176-227 (320)
457 3rp8_A Flavoprotein monooxygen 89.5 0.58 2E-05 44.9 6.8 52 279-335 127-179 (407)
458 4gbj_A 6-phosphogluconate dehy 89.5 0.24 8.4E-06 45.6 3.8 33 24-56 7-39 (297)
459 1vl6_A Malate oxidoreductase; 89.4 0.31 1.1E-05 46.3 4.5 34 21-54 191-225 (388)
460 1jw9_B Molybdopterin biosynthe 89.4 0.29 9.8E-06 43.9 4.1 34 22-55 31-65 (249)
461 3d1l_A Putative NADP oxidoredu 89.4 0.29 9.9E-06 44.1 4.2 33 23-55 11-44 (266)
462 2ahr_A Putative pyrroline carb 89.3 0.32 1.1E-05 43.6 4.5 33 23-55 4-36 (259)
463 1hyh_A L-hicdh, L-2-hydroxyiso 89.2 0.27 9.4E-06 45.5 4.0 32 24-55 3-36 (309)
464 1np3_A Ketol-acid reductoisome 89.2 0.36 1.2E-05 45.4 4.8 33 23-55 17-49 (338)
465 2cvz_A Dehydrogenase, 3-hydrox 89.2 0.32 1.1E-05 44.3 4.4 31 24-55 3-33 (289)
466 3gt0_A Pyrroline-5-carboxylate 89.1 0.4 1.4E-05 42.7 4.9 33 23-55 3-39 (247)
467 2vhw_A Alanine dehydrogenase; 89.1 0.34 1.2E-05 46.3 4.7 33 23-55 169-201 (377)
468 1gte_A Dihydropyrimidine dehyd 89.1 0.3 1E-05 53.2 4.8 33 24-56 334-367 (1025)
469 3t7c_A Carveol dehydrogenase; 89.0 0.58 2E-05 43.0 6.1 54 7-60 13-67 (299)
470 3zwc_A Peroxisomal bifunctiona 89.0 0.47 1.6E-05 49.5 5.9 35 22-56 316-350 (742)
471 3cp8_A TRNA uridine 5-carboxym 89.0 0.86 2.9E-05 46.6 7.7 50 280-332 118-168 (641)
472 1w4x_A Phenylacetone monooxyge 89.0 0.35 1.2E-05 48.6 4.9 35 22-56 186-220 (542)
473 3k30_A Histamine dehydrogenase 88.9 0.3 1E-05 50.8 4.4 39 23-61 524-564 (690)
474 3phh_A Shikimate dehydrogenase 88.8 0.43 1.5E-05 43.2 4.8 33 23-55 119-151 (269)
475 1p77_A Shikimate 5-dehydrogena 88.8 0.27 9.4E-06 44.6 3.6 33 23-55 120-152 (272)
476 2q1w_A Putative nucleotide sug 88.7 0.42 1.4E-05 44.5 4.9 43 11-55 12-55 (333)
477 3ihg_A RDME; flavoenzyme, anth 88.6 0.76 2.6E-05 46.0 7.1 55 279-335 120-181 (535)
478 3fi9_A Malate dehydrogenase; s 88.5 0.56 1.9E-05 44.1 5.6 36 20-55 6-44 (343)
479 1i36_A Conserved hypothetical 88.5 0.35 1.2E-05 43.5 4.1 30 24-53 2-31 (264)
480 1yb4_A Tartronic semialdehyde 88.4 0.32 1.1E-05 44.5 3.8 32 23-55 4-35 (295)
481 3b1f_A Putative prephenate deh 88.4 0.34 1.2E-05 44.2 4.1 33 23-55 7-41 (290)
482 2egg_A AROE, shikimate 5-dehyd 88.4 0.52 1.8E-05 43.4 5.2 33 23-55 142-175 (297)
483 2b69_A UDP-glucuronate decarbo 88.3 0.43 1.5E-05 44.6 4.8 45 11-55 13-61 (343)
484 2qrj_A Saccharopine dehydrogen 88.2 0.33 1.1E-05 46.3 3.8 39 22-60 214-257 (394)
485 3o38_A Short chain dehydrogena 88.0 0.69 2.4E-05 41.5 5.8 34 22-55 22-57 (266)
486 3alj_A 2-methyl-3-hydroxypyrid 87.9 1 3.4E-05 42.7 7.2 48 279-332 107-154 (379)
487 2rir_A Dipicolinate synthase, 87.9 0.47 1.6E-05 43.7 4.6 34 22-55 157-190 (300)
488 2hk9_A Shikimate dehydrogenase 87.9 0.4 1.4E-05 43.6 4.1 33 23-55 130-162 (275)
489 3ond_A Adenosylhomocysteinase; 87.9 0.47 1.6E-05 46.7 4.7 34 22-55 265-298 (488)
490 1ff9_A Saccharopine reductase; 87.8 0.44 1.5E-05 46.7 4.6 32 23-54 4-35 (450)
491 1a4i_A Methylenetetrahydrofola 87.8 0.68 2.3E-05 42.4 5.5 34 21-54 164-198 (301)
492 1coy_A Cholesterol oxidase; ox 87.8 0.59 2E-05 46.5 5.6 55 278-333 225-288 (507)
493 4hv4_A UDP-N-acetylmuramate--L 87.6 0.41 1.4E-05 47.5 4.3 36 21-56 21-57 (494)
494 3ek2_A Enoyl-(acyl-carrier-pro 87.6 0.49 1.7E-05 42.5 4.5 36 20-55 12-50 (271)
495 2d5c_A AROE, shikimate 5-dehyd 87.5 0.54 1.9E-05 42.3 4.7 32 24-55 118-149 (263)
496 2dbq_A Glyoxylate reductase; D 87.5 1.1 3.6E-05 42.1 6.9 35 22-56 150-184 (334)
497 3d4o_A Dipicolinate synthase s 87.4 0.52 1.8E-05 43.2 4.6 34 22-55 155-188 (293)
498 2yjz_A Metalloreductase steap4 87.2 0.11 3.8E-06 44.9 0.0 34 23-56 20-53 (201)
499 1lqt_A FPRA; NADP+ derivative, 87.3 0.45 1.5E-05 46.7 4.4 38 23-60 148-206 (456)
500 2gcg_A Glyoxylate reductase/hy 87.3 0.81 2.8E-05 42.8 5.9 35 21-55 154-188 (330)
No 1
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.5e-52 Score=412.20 Aligned_cols=361 Identities=23% Similarity=0.421 Sum_probs=292.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccc
Q 014049 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (431)
Q Consensus 19 ~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (431)
++++|||||||||++|+++|+.|+++|++|+|+||++++||++++++.+++..+... +.+. .
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~-g~~~-----------------~ 78 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKP-KENI-----------------P 78 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCT-TSCC-----------------C
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhccc-CCCc-----------------c
Confidence 456799999999999999999999999999999999999999999998776555432 2110 0
Q ss_pred ccccCCCCceeeecCCCeEEeeCchHHHHHHhcCcccccccccccceeeec--------cCCceeecCCChhhhhccCCC
Q 014049 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLD--------ADAKLCSVPDSRAAIFKDKSL 170 (431)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~~~~~~~~~~~~l~~~~~~~~~~f~~~~~~~~~~--------~~g~~~~~p~~~~~~~~~~~l 170 (431)
..+ ...++|++|+ +|+++++.+.++++|.++++.+|++|+.+++.|++. ++|+.+++|.++.++|+++.+
T Consensus 79 ~~~-g~~R~y~iDL-~P~~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lL 156 (475)
T 3p1w_A 79 SKY-GENRHWNVDL-IPKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLL 156 (475)
T ss_dssp GGG-CCGGGCCEES-SCCBEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTS
T ss_pred ccc-ccccceEEee-cCeEeecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCC
Confidence 112 3568999999 599999999999999999999999999999998763 256789999999999999999
Q ss_pred ChHHHHHHHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcCCCCcchhhhhhchhhH
Q 014049 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDG 250 (431)
Q Consensus 171 ~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~ 250 (431)
++.+|+++++|+..+..+.+..+.... ..+....|+.+|++++++++.+++++.+++++.... +. ...++..+
T Consensus 157 s~~eK~~l~kFL~~l~~~~~~~~~~~~----~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~-~~--~~~~a~~~ 229 (475)
T 3p1w_A 157 SLMEKNRCKNFYQYVSEWDANKRNTWD----NLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLND-DY--LKQPAYLT 229 (475)
T ss_dssp CHHHHHHHHHHHHHHHHCCTTCGGGST----TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSS-GG--GGSBHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhhccchhhh----cccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCC-Cc--ccCCHHHH
Confidence 999999999999998776432211000 012346899999999999999999887776664322 11 12467778
Q ss_pred HHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEE
Q 014049 251 INRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKL 330 (431)
Q Consensus 251 ~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~V 330 (431)
+.++..|+.++++||. ++++||+||+++|+++|++.++++||+|+++++|++|..+ ++|++++|++.+|++++||+|
T Consensus 230 l~ri~~y~~Sl~~yg~--s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d-~~g~v~gV~~~~G~~i~Ad~V 306 (475)
T 3p1w_A 230 LERIKLYMQSISAFGK--SPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFD-DDNKVCGIKSSDGEIAYCDKV 306 (475)
T ss_dssp HHHHHHHHHHHHHHSS--CSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEEC-TTSCEEEEEETTSCEEEEEEE
T ss_pred HHHHHHHHHHHhhcCC--CceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEe-cCCeEEEEEECCCcEEECCEE
Confidence 8889999988888874 3489999999999999999999999999999999999983 278899999999999999999
Q ss_pred EECCCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCCC--CCCceEEEeCCCCCCCCCCCeEEEEEecCC
Q 014049 331 VLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP--DLSNFLVIFPPRSLFPEQVTSIRVLQLGGN 408 (431)
Q Consensus 331 I~~p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~ 408 (431)
|+++++.. . +|+. ....+.++|+++|+++|++. +..+.+++||+.+++. ++.||+++.|++
T Consensus 307 I~a~~~~~-~--------~p~~------~~~~~~v~R~i~I~~~pi~~~~~~~~~~i~~P~~~~~~--~~~iy~~~~s~~ 369 (475)
T 3p1w_A 307 ICDPSYVM-H--------LKNK------IKKIGQVIRCICILSNPIPETNQTNSCQIIIPQNQLNR--KSDIYINLVSFQ 369 (475)
T ss_dssp EECGGGCT-T--------STTS------EEEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGGTS--SSCEEEEEEEGG
T ss_pred EECCCccc-c--------Cccc------ccccceEEEEEEEEeccCcccCCCceEEEEeCCcccCC--CCCEEEEEECCC
Confidence 99887641 0 1110 01246899999999999865 3467899999987765 678999999999
Q ss_pred CccCCCCcEEEEEEcCCC
Q 014049 409 LAVCPLGMVSLDLLSPLP 426 (431)
Q Consensus 409 ~~~aP~G~~~~~i~~~~p 426 (431)
+++||+|++++|++|.+.
T Consensus 370 ~~~cp~G~~i~~~st~~e 387 (475)
T 3p1w_A 370 HGVTLKGKYIAIVSATVE 387 (475)
T ss_dssp GTSSCTTCEEEEEEEECC
T ss_pred cCcCCCCcEEEEEEeecC
Confidence 999999999999999773
No 2
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=1.1e-49 Score=406.40 Aligned_cols=369 Identities=31% Similarity=0.521 Sum_probs=289.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCC-------C-----------
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSS-------V----------- 82 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~-------~----------- 82 (431)
.+|||+|||+|+.|.+.|+.|++.|++|+|+|+|++|||.+.++.+.++..|+........ +
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEAI 86 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC----------CGGGGCCTTEEEE
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHHHHHHHHHHhhccccccccccchhhhhhcchhhc
Confidence 4799999999999999999999999999999999999999999999999999876542100 0
Q ss_pred ---CCCCcccccccccc---------------------------------------------------------------
Q 014049 83 ---CPDPLYSDVEISNY--------------------------------------------------------------- 96 (431)
Q Consensus 83 ---~~~~~~~~~~~~~~--------------------------------------------------------------- 96 (431)
......++.++.++
T Consensus 87 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (650)
T 1vg0_A 87 PLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPGP 166 (650)
T ss_dssp EBCSSCCCEEEEEEEECSCC------------------------------------------------------------
T ss_pred cccccccccccceeEeecccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00000000000000
Q ss_pred ---------------------------------------cc--c-----cccCCCCceeeecCCCeEEeeCchHHHHHHh
Q 014049 97 ---------------------------------------AS--R-----LLSQHPRNFNLDVSGPRVLFCADHAVDLMLK 130 (431)
Q Consensus 97 ---------------------------------------~~--~-----~~~~~~~~~~~dl~Gp~~~~~~~~~~~~l~~ 130 (431)
.+ . .+.+..|+|+||+ ||+++++++.++++|.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL-~PklL~~~g~lv~LL~~ 245 (650)
T 1vg0_A 167 ESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDL-VSKLLYSRGLLIDLLIK 245 (650)
T ss_dssp --------------------------------------------CCCHHHHHHTGGGCCEES-SCCCEESSSHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEee-CCeeeeCCcHHHHHHHH
Confidence 00 0 0112578999999 59999999999999999
Q ss_pred cCcccccccccccceeeeccCCceeecCCChhhhhccCCCChHHHHHHHHHHHHHHcccCCCccccccccccccccCCcH
Q 014049 131 SGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPF 210 (431)
Q Consensus 131 ~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 210 (431)
+|+.+|++|+.++..|++. +|++.++|.++.++|+++.+++.+|+.+++|+..+..+.. .+ ..+..+...|+
T Consensus 246 sgV~~yLEFk~v~~~y~~~-~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p------~~~~~~d~~S~ 317 (650)
T 1vg0_A 246 SNVSRYAEFKNITRILAFR-EGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HP------DEYRAYEGTTF 317 (650)
T ss_dssp HTGGGGCCEEECCEEEEES-SSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CH------HHHHTTTTSBH
T ss_pred cCCcceeeEEEccceEEec-CCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-Ch------HHHhhhccCCH
Confidence 9999999999999988874 8889999999999999999999999999999998876432 11 11234567899
Q ss_pred HHHHHhcCCChhHHHHHHHHHhcCCCCcchhhhhhchhhHHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHH
Q 014049 211 AEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAA 290 (431)
Q Consensus 211 ~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~ 290 (431)
.+|++++++++.++.++.+.+++..... .+...++.++..|+.++++||. ++++||+||+++|+++|+|+++
T Consensus 318 ~d~L~~~~ls~~L~~~L~~~lal~~~~~------~pa~~~l~~i~~~l~sl~~yg~--sg~~yp~GG~g~L~qaL~r~~~ 389 (650)
T 1vg0_A 318 SEYLKTQKLTPNLQYFVLHSIAMTSETT------SCTVDGLKATKKFLQCLGRYGN--TPFLFPLYGQGELPQCFCRMCA 389 (650)
T ss_dssp HHHHTTSSSCHHHHHHHHHHTTC--CCS------CBHHHHHHHHHHHHHHTTSSSS--SSEEEETTCTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHhccCCCC------CchhHHHHHHHHHHHHHHhhcc--CceEEeCCchhHHHHHHHHHHH
Confidence 9999999999999999887665543321 2345566677888888888875 3489999999999999999999
Q ss_pred hcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEECCCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEE
Q 014049 291 VKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGIC 370 (431)
Q Consensus 291 ~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 370 (431)
++||+|+++++|++|.++.++|+++||++.+|++++||+||++|.++ +.... .+...++++|+++
T Consensus 390 ~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~l-p~~~~--------------~~~~~~~v~R~i~ 454 (650)
T 1vg0_A 390 VFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYL-SENTC--------------SRVQYRQISRAVL 454 (650)
T ss_dssp HTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGB-CTTTT--------------TTCCCEEEEEEEE
T ss_pred HcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhc-CHhHh--------------ccccccceEEEEE
Confidence 99999999999999999821188999998889999999999987765 32110 1113467999999
Q ss_pred EeCCCCCCC---CCceEEEeCCCCCCCCCCCeEEEEEecCCCccCCCCcEEEEEEcC
Q 014049 371 ITRSSLKPD---LSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGMVSLDLLSP 424 (431)
Q Consensus 371 i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~aP~G~~~~~i~~~ 424 (431)
++++++.+. ....++++|+.+ +. ++.||++++|+++++||+|++++|+++.
T Consensus 455 i~~~pi~~~~~~~~~~~iiiP~~~-g~--~~~V~i~~~Ss~~~~cP~G~~Vv~lst~ 508 (650)
T 1vg0_A 455 ITDGSVLRTDADQQVSILTVPAEE-PG--SFAVRVIELCSSTMTCMKGTYLVHLTCM 508 (650)
T ss_dssp EESSCSSCCSCCCCCEEEEECCSS-TT--SCCEEEEEECGGGTSSCTTCEEEEEEEE
T ss_pred EecCCCCCcCCCcceEEEEccCcc-CC--CCCEEEEEeCCCCCCCCCCCEEEEEEee
Confidence 999987643 245777888765 32 7899999999999999999999999886
No 3
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=7.8e-43 Score=350.15 Aligned_cols=363 Identities=24% Similarity=0.467 Sum_probs=268.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (431)
+.++||||||||++||+||++|+++|++|+||||++++||+++|++.++...+. +.+... ... ...
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~-d~~~~~-----------~~~--~~~ 74 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKF-KQNPIS-----------KEE--RES 74 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHH-CSSCCC-----------HHH--HHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhcee-ccCCcc-----------ccC--cch
Confidence 356999999999999999999999999999999999999999999987632221 111000 000 000
Q ss_pred cccCCCCceeeecCCCeEEeeCchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhccCCCChHHHHHHH
Q 014049 100 LLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (431)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~~~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~ 179 (431)
.+ .....|.+++ +|+++++.+.+.++|.++|+.+|++|..++..|.+. +|+.+++|.+..+.+....++..+|+.++
T Consensus 75 ~~-~~g~~~~~~l-~P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~~ 151 (453)
T 2bcg_G 75 KF-GKDRDWNVDL-IPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK-QGKIYKVPANEIEAISSPLMGIFEKRRMK 151 (453)
T ss_dssp HH-CCGGGCCEES-SCCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE-TTEEEECCSSHHHHHHCTTSCHHHHHHHH
T ss_pred hc-ccccceeecc-ccceeecCcHHHHHHHhcCCccceEEEEccceeEEe-CCeEEECCCChHHHHhhhccchhhHHHHH
Confidence 00 1224677899 599999999999999999999999999998888765 88999999986677777777888999999
Q ss_pred HHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcCCCCcchhhhhhchhhHHHHHHHHHh
Q 014049 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNS 259 (431)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 259 (431)
+|+..+.......+.. . . ..++...|+.+|+++++.++.+++++.+.+.+.... +. ...+...++.++..|+.
T Consensus 152 ~~~~~~~~~~~~~p~~--~-~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~-~~--~~~p~~~~~~~~~~~~~ 224 (453)
T 2bcg_G 152 KFLEWISSYKEDDLST--H-Q-GLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTND-DY--LQQPARPSFERILLYCQ 224 (453)
T ss_dssp HHHHHHHHCBTTBGGG--S-T-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSS-GG--GGSBHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCchh--h-h-ccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCc-cc--cCCchHHHHHHHHHHHH
Confidence 9998887654321110 0 0 012457899999999999999999887654432110 00 00134445555666777
Q ss_pred hhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEECCCCCCC
Q 014049 260 SIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVP 339 (431)
Q Consensus 260 s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p~~~~~ 339 (431)
+++.++. +++.||+||+++|+++|++.++++|++|+++++|++|..+.+++++++|++ +|++++||+||+++.....
T Consensus 225 s~~~~~~--~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 225 SVARYGK--SPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHSS--CSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHhhcC--CceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 6666653 347799999999999999999999999999999999987521467788886 6889999999987543211
Q ss_pred CCCCCchhhhhhhhhhhcccCCCC-eEEEEEEEeCCCCCC--CCCceEEEeCCCCCCCCCCCeEEEEEecCCCccCCCCc
Q 014049 340 GSLASSHQQLQESFQAFSLSDNKG-KVARGICITRSSLKP--DLSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (431)
Q Consensus 340 ~l~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~aP~G~ 416 (431)
+ +. ... ...+++++++++++. ...++.+++|...++. +|++|+++++.++++||+|+
T Consensus 302 ~--------l~----------~~~~~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~--~~~~~v~~~s~~d~~aP~G~ 361 (453)
T 2bcg_G 302 K--------CK----------STGQRVIRAICILNHPVPNTSNADSLQIIIPQSQLGR--KSDIYVAIVSDAHNVCSKGH 361 (453)
T ss_dssp G--------EE----------EEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTTC--SSCEEEEEEEGGGTSSCTTC
T ss_pred h--------hc----------ccCCcceeEEEEEccccCCCCCCccEEEEeCccccCC--CCCEEEEEeCCCCCCCCCCc
Confidence 1 10 122 466777788888753 3457888999776665 78999999996448999999
Q ss_pred EEEEEEcCCCCCC
Q 014049 417 VSLDLLSPLPHQM 429 (431)
Q Consensus 417 ~~~~i~~~~p~~~ 429 (431)
+++|+++++|+..
T Consensus 362 ~~~~v~~~~~~~~ 374 (453)
T 2bcg_G 362 YLAIISTIIETDK 374 (453)
T ss_dssp EEEEEEEECCSSC
T ss_pred EEEEEEEecCCCC
Confidence 9999999998753
No 4
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=6.4e-41 Score=334.22 Aligned_cols=357 Identities=26% Similarity=0.485 Sum_probs=268.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccC-hhhhhhhhhcCCCCCCCCCCCcccccccccccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (431)
+.++||||||||++||+||++|+++|++|+|+|+++++||+++|++ +..... .++.+.. .+..
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~-~~~~~~~-------~~~~-------- 67 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYK-RFQLLEG-------PPET-------- 67 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHH-HTTCTTC-------CCGG--------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHh-hccCCCC-------ChhH--------
Confidence 4569999999999999999999999999999999999999999998 432110 1111000 0000
Q ss_pred ccccCCCCceeeecCCCeEEeeCchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhccCCCChHHHHHH
Q 014049 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (431)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~~~~~~~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (431)
+ .....|.+|+ ||++++..+.+.+++.++|+.+|++|...++.|.+. +|+.+.+|.+..+.+.....+..+++.+
T Consensus 68 --~-~~g~~~~~d~-gP~~l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~ 142 (433)
T 1d5t_A 68 --M-GRGRDWNVDL-IPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYK-GGKIYKVPSTETEALASNLMGMFEKRRF 142 (433)
T ss_dssp --G-CCGGGCCEES-SCCBEETTSHHHHHHHHHTGGGGCCEEECCEEEEEE-TTEEEECCCSHHHHHHCSSSCHHHHHHH
T ss_pred --h-cccCceEEcc-CcceeeccchHHHHHHHcCCccceEEEEeCceEEee-CCEEEECCCCHHHHhhCcccChhhHHHH
Confidence 0 1225788999 699999888999999999999999999988878764 8888999998667777777777799999
Q ss_pred HHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcCCCCcchhhhhhchhhHHHHHHHHH
Q 014049 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (431)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 258 (431)
++|++.+..+....+... + ..++...|+.+|+++++.++.+++++.+.+++... .++ ...++..++.++..|.
T Consensus 143 ~~~~~~~~~~~~~~p~~~---~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~-~~~--~~~p~~~~~~~~~~~~ 215 (433)
T 1d5t_A 143 RKFLVFVANFDENDPKTF---E-GVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRT-DDY--LDQPCLETINRIKLYS 215 (433)
T ss_dssp HHHHHHHHHCCTTCGGGG---T-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSS-SGG--GGSBSHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCchhc---c-ccccccCCHHHHHHHcCCCHHHHHHHHHHHHhccC-CCc--cCCCHHHHHHHHHHHH
Confidence 999988776432211110 1 11346789999999999999999987665433211 111 1234555666677777
Q ss_pred hhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEECCCCCC
Q 014049 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTV 338 (431)
Q Consensus 259 ~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p~~~~ 338 (431)
.+++++|. ++++||+||+++|+++|++.++++|++|+++++|++|..+ ++++++|+ .+|++++||+||++....
T Consensus 216 ~s~~~~g~--~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~--~~~v~~v~-~~g~~~~ad~VV~a~~~~- 289 (433)
T 1d5t_A 216 ESLARYGK--SPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK-SEGEVARCKQLICDPSYV- 289 (433)
T ss_dssp HSCCSSSC--CSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE--TTEEEEEE-ETTEEEECSEEEECGGGC-
T ss_pred HHHHhcCC--CcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEe--CCEEEEEE-ECCeEEECCEEEECCCCC-
Confidence 77666663 3478999999999999999999999999999999999987 78888887 488899999999875432
Q ss_pred CCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCCCC--CCceEEEeCCCCCCCCCCCeEEEEEecCCCccCCCCc
Q 014049 339 PGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD--LSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (431)
Q Consensus 339 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~~aP~G~ 416 (431)
+.. ++ + .....+++++++++++.. ..++++++|...++. +|++|+++++.|+++||+|+
T Consensus 290 ~~~-------~~-------~---~~~~~~~~~il~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~v~~~s~d~~~aP~G~ 350 (433)
T 1d5t_A 290 PDR-------VR-------K---AGQVIRIICILSHPIKNTNDANSCQIIIPQNQVNR--KSDIYVCMISYAHNVAAQGK 350 (433)
T ss_dssp GGG-------EE-------E---EEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTTC--SSCEEEEEEEGGGTSSCTTC
T ss_pred ccc-------cc-------c---cCcceeEEEEEcCcccccCCCceEEEEeCccccCC--CCCEEEEEECCCCcccCCCC
Confidence 110 10 0 113455677788887532 368899998776665 79999999998889999999
Q ss_pred EEEEEEcCCCCCC
Q 014049 417 VSLDLLSPLPHQM 429 (431)
Q Consensus 417 ~~~~i~~~~p~~~ 429 (431)
+++++++++|+..
T Consensus 351 ~~~~~~~~~p~~~ 363 (433)
T 1d5t_A 351 YIAIASTTVETTD 363 (433)
T ss_dssp EEEEEEEECCSSC
T ss_pred EEEEEEEecCCCC
Confidence 9999999998753
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=7.3e-38 Score=318.42 Aligned_cols=346 Identities=15% Similarity=0.153 Sum_probs=216.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (431)
.+|||||||++||+||++|+++|++|+||||++++||+++|++.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~----------------------------------- 46 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQ----------------------------------- 46 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEET-----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeC-----------------------------------
Confidence 589999999999999999999999999999999999999998653
Q ss_pred CCCCceeeecCCCeEEeeCchHHHHHHhcC--cccccccccccceee-eccCCceeecCCChhhhhcc-CCCChHHHHHH
Q 014049 103 QHPRNFNLDVSGPRVLFCADHAVDLMLKSG--ASHYLEFKSIDATFM-LDADAKLCSVPDSRAAIFKD-KSLGLMEKNQL 178 (431)
Q Consensus 103 ~~~~~~~~dl~Gp~~~~~~~~~~~~l~~~~--~~~~~~f~~~~~~~~-~~~~g~~~~~p~~~~~~~~~-~~l~~~~k~~l 178 (431)
+|.+|. ||+++..++.+.+++...+ +.+++++.++++.|. ...+|+.+.++.+....... ..+++.+...+
T Consensus 47 ----G~~~D~-G~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~ 121 (501)
T 4dgk_A 47 ----GFTFDA-GPTVITDPSAIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGY 121 (501)
T ss_dssp ----TEEEEC-SCCCBSCTHHHHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHH
T ss_pred ----CEEEec-CceeecCchhHHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchh
Confidence 467888 6888776666666666655 567888888888773 33578888888776443321 23457777888
Q ss_pred HHHHHHHHcccCCCcc---c---ccccc---ccccc----cCCcHHHHHHhcCCChhHHHHHHH-HHhcCCCCcchhhhh
Q 014049 179 MRFFKLVQGHLSLDES---E---ENNVR---ISEED----LDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYV 244 (431)
Q Consensus 179 ~~~~~~~~~~~~~~~~---~---~~~~~---~~~~~----~~~s~~~~l~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~ 244 (431)
.+|++.++........ . ....+ ..... ...++.++++++..++.++.++.. +.........
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~----- 196 (501)
T 4dgk_A 122 RQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFA----- 196 (501)
T ss_dssp HHHHHHHHHHTSSSCC--CCCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC-------
T ss_pred hhHHHHHHHhhhhhhhhccccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcch-----
Confidence 8888776654322110 0 00000 00011 114677888888788888887653 2111111111
Q ss_pred hchhhHHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcE
Q 014049 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD 324 (431)
Q Consensus 245 ~s~~~~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~ 324 (431)
.+.. ..+..++. ...| .+||+||+++|+++|++.++++||+|++|++|++|.++ ++++++|+++||++
T Consensus 197 ~~~~---~~~~~~~~--~~~G-----~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~~g~~ 264 (501)
T 4dgk_A 197 TSSI---YTLIHALE--REWG-----VWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETT--GNKIEAVHLEDGRR 264 (501)
T ss_dssp CCCT---HHHHHHHH--SCCC-----EEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCE
T ss_pred hhhh---hhhhhhhh--ccCC-----eEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEee--CCeEEEEEecCCcE
Confidence 1111 11222221 1223 67999999999999999999999999999999999998 89999999999999
Q ss_pred EEeCEEEEC--CCCCCCCCCCCchhhhhhhh-hhhcccCCCCeEEEEEEEeCCCCCCCCCceEEEeCCCCCC--------
Q 014049 325 ILSHKLVLD--PSFTVPGSLASSHQQLQESF-QAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLF-------- 393 (431)
Q Consensus 325 i~Ad~VI~~--p~~~~~~l~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-------- 393 (431)
+.||.||++ |..++..|+. .. +++... +.+.+........+..+.++.+.+ ...++.+++.+....
T Consensus 265 ~~ad~VV~~a~~~~~~~~Ll~-~~-~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~-~l~~~~i~~~~~~~~~~~~~~~~ 341 (501)
T 4dgk_A 265 FLTQAVASNADVVHTYRDLLS-QH-PAAVKQSNKLQTKRMSNSLFVLYFGLNHHHD-QLAHHTVCFGPRYRELIDEIFNH 341 (501)
T ss_dssp EECSCEEECCC-----------------------------CCEEEEEEEEESSCCT-TSCSEEEEEECC-----------
T ss_pred EEcCEEEECCCHHHHHHHhcc-cc-ccchhhhhhhhccccCCceeEEEecccCCcc-ccccceeccccchhhhccccccc
Confidence 999999975 4455555542 11 122211 112111112223333334576653 445677766543211
Q ss_pred --CCCCCeEEEEEec-CCCccCCCCcEEEEEEcCCCCC
Q 014049 394 --PEQVTSIRVLQLG-GNLAVCPLGMVSLDLLSPLPHQ 428 (431)
Q Consensus 394 --~~~~~~i~v~~~~-~~~~~aP~G~~~~~i~~~~p~~ 428 (431)
-..++++|+++++ .|++.||+|+.++++++++|+.
T Consensus 342 ~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~ 379 (501)
T 4dgk_A 342 DGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHL 379 (501)
T ss_dssp --CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCT
T ss_pred cccccCCceecccCCCCCCCcCCCCCceEEEEEecCcc
Confidence 1237899999999 5999999999999999999875
No 6
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.95 E-value=3e-27 Score=234.90 Aligned_cols=317 Identities=12% Similarity=0.090 Sum_probs=195.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (431)
+||||||||++||+||++|+++|++|+||||++++||+++++..+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~----------------------------------- 45 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYK----------------------------------- 45 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEET-----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccC-----------------------------------
Confidence 389999999999999999999999999999999999999997643
Q ss_pred CCCCceeeecCCCeEEee---CchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhccCCCChHHHHHHH
Q 014049 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (431)
Q Consensus 103 ~~~~~~~~dl~Gp~~~~~---~~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~ 179 (431)
+|.+|. ||+++.. ...+.+++.+.+.. .++...++...+..+|+..+++... ..+++.++..+.
T Consensus 46 ----g~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~--~~~~~~~~~~~~~~~g~~~~~~~~~------~~l~~~~~~~~~ 112 (421)
T 3nrn_A 46 ----GFQLST-GALHMIPHGEDGPLAHLLRILGAK--VEIVNSNPKGKILWEGKIFHYRESW------KFLSVKEKAKAL 112 (421)
T ss_dssp ----TEEEES-SSCSEETTTTSSHHHHHHHHHTCC--CCEEECSSSCEEEETTEEEEGGGGG------GGCC--------
T ss_pred ----CEEEec-CCeEEEccCCChHHHHHHHHhCCc--ceEEECCCCeEEEECCEEEEcCCch------hhCCHhHHHHHH
Confidence 456677 5655432 23567777777764 3344433333222267777776432 234566666665
Q ss_pred HHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCC-ChhHHHHHHHH-HhcCCCCcchhhhhhchhhHHHHHHHH
Q 014049 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKL-PHKIKSIVLYA-IAMADYDQEVSEYVLKTRDGINRLALY 257 (431)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~-~~~l~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~ 257 (431)
+++..+.... ....+.++.+|++++++ .+.++.++... ..... .++ .+++....+..+..+
T Consensus 113 ~~~~~~~~~~-------------~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~ 175 (421)
T 3nrn_A 113 KLLAEIRMNK-------------LPKEEIPADEWIKEKIGENEFLLSVLESFAGWADS--VSL--SDLTALELAKEIRAA 175 (421)
T ss_dssp CCHHHHHTTC-------------CCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHS--SCG--GGSBHHHHHHHHHHH
T ss_pred HHHHHHHhcc-------------CCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcC--CCc--ccCCHHHHHHHHHHH
Confidence 5554433210 01224789999998744 44444443321 11111 111 234554444444333
Q ss_pred HhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC-CCC
Q 014049 258 NSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSF 336 (431)
Q Consensus 258 ~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~-p~~ 336 (431)
. .++ + .++|+||+++|+++|++.+++.|++|+++++|++|..+ ++++ |. .+|++++||+||++ +..
T Consensus 176 ~----~~~---g-~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~v--V~-~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 176 L----RWG---G-PGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIE--EKKV--YT-RDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp H----HHC---S-CEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETT--TTEE--EE-TTCCEEECSEEEECSCHH
T ss_pred h----hcC---C-cceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEE--CCEE--EE-eCCcEEEeCEEEECCCHH
Confidence 2 122 1 57999999999999999999999999999999999875 6664 64 68899999999965 333
Q ss_pred CCCCCCCCchhhhhhhh-hhhcccCCCCeEEEEEEEeCCCCCCCCCceEEEeCCCCCCCCCCCeEEEEEec-CCCccCCC
Q 014049 337 TVPGSLASSHQQLQESF-QAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLG-GNLAVCPL 414 (431)
Q Consensus 337 ~~~~l~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~-~~~~~aP~ 414 (431)
...+|+. .+.++..+ +.+.+ ..+....+..+.++++. ..++.++++++.. .-.+..++ .|+..||+
T Consensus 243 ~~~~ll~--~~~~~~~~~~~~~~-~~~~~~~~v~l~~~~~~---~~~~~~~~~~~~~------~~~i~~~s~~~p~~ap~ 310 (421)
T 3nrn_A 243 ETVKLIG--RDYFDRDYLKQVDS-IEPSEGIKFNLAVPGEP---RIGNTIVFTPGLM------INGFNEPSALDKSLARE 310 (421)
T ss_dssp HHHHHHC--GGGSCHHHHHHHHT-CCCCCEEEEEEEEESSC---SSCSSEEECTTSS------SCEEECGGGTCGGGSCT
T ss_pred HHHHhcC--cccCCHHHHHHHhC-CCCCceEEEEEEEcCCc---ccCCeEEEcCCcc------eeeEeccCCCCCCcCCC
Confidence 3234331 11233221 12222 22334455555567652 2345566666532 11345556 58899999
Q ss_pred CcEEEEEEcCCCCCC
Q 014049 415 GMVSLDLLSPLPHQM 429 (431)
Q Consensus 415 G~~~~~i~~~~p~~~ 429 (431)
|+.++++.+++|...
T Consensus 311 G~~~~~~~~~~~~~~ 325 (421)
T 3nrn_A 311 GYTLIMAHMALKNGN 325 (421)
T ss_dssp TEEEEEEEEECTTCC
T ss_pred CceEEEEEEeecccc
Confidence 999999999888653
No 7
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.95 E-value=1.2e-26 Score=230.67 Aligned_cols=316 Identities=13% Similarity=0.086 Sum_probs=195.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (431)
+||||||||++||+||++|+++|++|+|||+++++||+++++..+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~----------------------------------- 45 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYK----------------------------------- 45 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEET-----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccC-----------------------------------
Confidence 589999999999999999999999999999999999999997654
Q ss_pred CCCCceeeecCCCeEEee---CchHHHHHHhcCcccccccccccceeeec-cC--------CceeecCCChhhhhccCCC
Q 014049 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLD-AD--------AKLCSVPDSRAAIFKDKSL 170 (431)
Q Consensus 103 ~~~~~~~~dl~Gp~~~~~---~~~~~~~l~~~~~~~~~~f~~~~~~~~~~-~~--------g~~~~~p~~~~~~~~~~~l 170 (431)
+|.+|. ||+.+.. ...+.+++.+.|....+.... ...+.+. .+ ++.+.++. . ...+
T Consensus 46 ----G~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~ 113 (425)
T 3ka7_A 46 ----GFQLSS-GAFHMLPNGPGGPLACFLKEVEASVNIVRSE-MTTVRVPLKKGNPDYVKGFKDISFND----F--PSLL 113 (425)
T ss_dssp ----TEEEES-SSCSCBTTGGGSHHHHHHHHTTCCCCEEECC-CCEEEEESSTTCCSSTTCEEEEEGGG----G--GGGS
T ss_pred ----CcEEcC-CCceEecCCCccHHHHHHHHhCCCceEEecC-CceEEeecCCCcccccccccceehhh----h--hhhC
Confidence 344566 4544321 125667777777654322221 1111111 01 33333321 1 1245
Q ss_pred ChHHHHHHHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHH-HHhcCCCCcchhhhhhchhh
Q 014049 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYVLKTRD 249 (431)
Q Consensus 171 ~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~s~~~ 249 (431)
++.++..+...+..+.. ....+.++.+|++++..++.++.++.. ...... .++ .+++...
T Consensus 114 ~~~~~~~~~~~~~~~~~---------------~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~s~~~ 174 (425)
T 3ka7_A 114 SYKDRMKIALLIVSTRK---------------NRPSGSSLQAWIKSQVSDEWLIKFADSFCGWALS--LKS--DEVPVEE 174 (425)
T ss_dssp CHHHHHHHHHHHHHTTT---------------SCCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHS--SCG--GGSBHHH
T ss_pred CHHHHHHHHHHHHhhhh---------------cCCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhC--CCc--ccchHHH
Confidence 66666655544332211 012357899999987666666655432 111111 111 2345544
Q ss_pred HHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCE
Q 014049 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (431)
Q Consensus 250 ~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~ 329 (431)
.+..+..+. .++. ..+++||++.|+++|++.++++|++|+++++|++|..+ ++++++|++ +|++++||+
T Consensus 175 ~~~~~~~~~----~~~~----~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~~~gv~~-~g~~~~ad~ 243 (425)
T 3ka7_A 175 VFEIIENMY----RFGG----TGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIE--NGKAAGIIA-DDRIHDADL 243 (425)
T ss_dssp HHHHHHHHH----HHCS----CEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEE-TTEEEECSE
T ss_pred HHHHHHHHH----hcCC----ccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEE--CCEEEEEEE-CCEEEECCE
Confidence 444333321 2231 56899999999999999999999999999999999987 788888986 588999999
Q ss_pred EEEC-CCCCCCCCCCCchhhh--hhh-hhhhcccCCCCeEEEEEEEeCCCCCCCCCceEEEeCCCCCCCCCCCeEEEEEe
Q 014049 330 LVLD-PSFTVPGSLASSHQQL--QES-FQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQL 405 (431)
Q Consensus 330 VI~~-p~~~~~~l~~~~~~~l--~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~ 405 (431)
||++ +.....+|+.. .+.+ +.. ...+.+ .......+..+.+++++. .++.+++++.. ++...+..+
T Consensus 244 VV~a~~~~~~~~ll~~-~~~~~~~~~~~~~~~~-~~~~~~~~v~l~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~ 313 (425)
T 3ka7_A 244 VISNLGHAATAVLCSE-ALSKEADAAYFKMVGT-LQPSAGIKICLAADEPLV---GHTGVLLTPYT-----RRINGVNEV 313 (425)
T ss_dssp EEECSCHHHHHHHTTT-TCCTTTTHHHHHHHHH-CCCBEEEEEEEEESSCSS---CSSSEEECCSS-----SSEEEEECG
T ss_pred EEECCCHHHHHHhcCC-cccccCCHHHHHHhhC-cCCCceEEEEeecCCCcc---CcCEEEECCCh-----hhcceEEec
Confidence 9975 33332343321 1111 221 122221 223344555556787653 35666676642 234456666
Q ss_pred c-CCCccCCCCcEEEEEEcCC
Q 014049 406 G-GNLAVCPLGMVSLDLLSPL 425 (431)
Q Consensus 406 ~-~~~~~aP~G~~~~~i~~~~ 425 (431)
| .+++.||+|+.++++..+.
T Consensus 314 s~~~p~~ap~G~~~l~~~~~~ 334 (425)
T 3ka7_A 314 TQADPELAPPGKHLTMCHQYV 334 (425)
T ss_dssp GGTCGGGSCTTCEEEEEEEEE
T ss_pred cCCCCCcCCCCCeEEEEEecc
Confidence 6 5889999999999887653
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.94 E-value=2.4e-25 Score=224.81 Aligned_cols=330 Identities=15% Similarity=0.156 Sum_probs=199.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCccccccccccccccc
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (431)
.+||||||||++||+||..|+++|++|+|||+++++||+++|++.+
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~---------------------------------- 61 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALA---------------------------------- 61 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEET----------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccC----------------------------------
Confidence 5799999999999999999999999999999999999999998643
Q ss_pred cCCCCceeeecCCCeEEee-CchHHHHHHhcCcccccccccc--cceeeeccCCceeecCCChhhhhccCCCChHHHHHH
Q 014049 102 SQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSI--DATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (431)
Q Consensus 102 ~~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~~~~~~~~f~~~--~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (431)
++.+|. |++++.. ...+.+++.+.|+.+.+.+... ...+++. +|+.+.+|.+..+.+....++..++..+
T Consensus 62 -----g~~~~~-g~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~~~~~~~~ 134 (478)
T 2ivd_A 62 -----GYLVEQ-GPNSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYT-RGRLRSVPASPPAFLASDILPLGARLRV 134 (478)
T ss_dssp -----TEEEES-SCCCEETTCHHHHHHHHHTTCGGGEECSCSSCCCEEEEE-TTEEEECCCSHHHHHTCSSSCHHHHHHH
T ss_pred -----Ceeeec-ChhhhhhhhHHHHHHHHHcCCcceeeecCccccceEEEE-CCEEEECCCCHHHhccCCCCCHHHHHHH
Confidence 355777 6887755 3467788899998765543321 1233343 7888888887766665555554433221
Q ss_pred HHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHH-HhcCCCCcchhhhhhchhhHHHHHHHH
Q 014049 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYA-IAMADYDQEVSEYVLKTRDGINRLALY 257 (431)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~ 257 (431)
+....... .....+.++.+|+++...++.++.++... ... +..++ .++++...+..+..+
T Consensus 135 ------~~~~~~~~---------~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~s~~~~~~~~~~~ 195 (478)
T 2ivd_A 135 ------AGELFSRR---------APEGVDESLAAFGRRHLGHRATQVLLDAVQTGI--YAGDV--EQLSVAATFPMLVKM 195 (478)
T ss_dssp ------HGGGGCCC---------CCTTCCCBHHHHHHHHTCHHHHHHTHHHHHHHH--HCCCT--TTBBHHHHCHHHHHH
T ss_pred ------hhhhhcCC---------CCCCCCCCHHHHHHHhhCHHHHHHHHHHHhcee--ecCCH--HHhhHHHHhHHHHHH
Confidence 22221110 01245689999998753333333333211 111 11121 234444433333222
Q ss_pred Hhhhcc-------c----------cCCC----ccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEE
Q 014049 258 NSSIGR-------F----------QNAL----GALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKG 316 (431)
Q Consensus 258 ~~s~~~-------~----------g~~~----~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~g 316 (431)
....+. . .... +.+++++||+++|+++|++.+ |++|+++++|++|..+ +++ +.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~--~~~-~~ 269 (478)
T 2ivd_A 196 EREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARE--DGG-WR 269 (478)
T ss_dssp HHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC----C-CE
T ss_pred HHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEec--CCe-EE
Confidence 111000 0 0000 237899999999999998754 7899999999999876 444 57
Q ss_pred EEe---CCCcEEEeCEEEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCCCCCCceEEEeCCCCC
Q 014049 317 VRL---ASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSL 392 (431)
Q Consensus 317 V~~---~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 392 (431)
|++ .+|++++||+||++ |...+.+++ ++++..+....+...+..+.+..+.+++++-+......+++|...
T Consensus 270 v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll----~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~- 344 (478)
T 2ivd_A 270 LIIEEHGRRAELSVAQVVLAAPAHATAKLL----RPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEE- 344 (478)
T ss_dssp EEEEETTEEEEEECSEEEECSCHHHHHHHH----TTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGG-
T ss_pred EEEeecCCCceEEcCEEEECCCHHHHHHHh----hccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCC-
Confidence 877 68889999999975 433323332 223333222223334567778888888875222133445555321
Q ss_pred CCCCCCeEEEEEec-CCCccCCCCcEEEEEEcCC
Q 014049 393 FPEQVTSIRVLQLG-GNLAVCPLGMVSLDLLSPL 425 (431)
Q Consensus 393 ~~~~~~~i~v~~~~-~~~~~aP~G~~~~~i~~~~ 425 (431)
. .+...+...+ .++..+|+|+.++.+.+..
T Consensus 345 -~--~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~ 375 (478)
T 2ivd_A 345 -Q--RRMLGAIHASTTFPFRAEGGRVLYSCMVGG 375 (478)
T ss_dssp -C--CSCCEEEEHHHHCGGGBSTTCEEEEEEEEC
T ss_pred -C--CceEEEEEEcccCCCcCCCCCEEEEEEeCC
Confidence 1 2334444444 3567789998887766654
No 9
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.93 E-value=9.2e-25 Score=222.86 Aligned_cols=294 Identities=14% Similarity=0.084 Sum_probs=185.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (431)
..+||||||||++||+||.+|+++|++|+|||+++++||+++|++.+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~--------------------------------- 49 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQ--------------------------------- 49 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCT---------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccC---------------------------------
Confidence 45899999999999999999999999999999999999999997642
Q ss_pred ccCCCCceeeecCCCeEEeeC-chHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhccCCCChHHHHHHH
Q 014049 101 LSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (431)
Q Consensus 101 ~~~~~~~~~~dl~Gp~~~~~~-~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l~ 179 (431)
.++.+|+ |++++... ..+.+++.+.|+..+..+.. ...++..+|+.+.++... . ..+++.+...+.
T Consensus 50 -----~g~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~--~~~~~~~~g~~~~~~~~~----p-~~~~~~~~~~~~ 116 (520)
T 1s3e_A 50 -----KVKYVDL-GGSYVGPTQNRILRLAKELGLETYKVNEV--ERLIHHVKGKSYPFRGPF----P-PVWNPITYLDHN 116 (520)
T ss_dssp -----TTSCEES-SCCEECTTCHHHHHHHHHTTCCEEECCCS--SEEEEEETTEEEEECSSS----C-CCCSHHHHHHHH
T ss_pred -----CCccccc-CceEecCCcHHHHHHHHHcCCcceecccC--CceEEEECCEEEEecCCC----C-CCCCHHHHHHHH
Confidence 1344677 58877543 36778888888876543322 112122256655554321 0 113344444444
Q ss_pred HHHHHHHcccCCCcccccc-ccccccccCCcHHHHHHhcCCChhHHHHHHHHH-hcCCCCcchhhhhhchhhHHHHHHHH
Q 014049 180 RFFKLVQGHLSLDESEENN-VRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAI-AMADYDQEVSEYVLKTRDGINRLALY 257 (431)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~ 257 (431)
+++..+............. .....++.+.++.+|+++...++.++.++.... .. +..++ .++|+...+. +
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~--~g~~~--~~~s~~~~~~----~ 188 (520)
T 1s3e_A 117 NFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLC--VTAET--HEVSALWFLW----Y 188 (520)
T ss_dssp HHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHH--HSSCT--TTSBHHHHHH----H
T ss_pred HHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhh--cCCCh--HHhHHHHHHH----H
Confidence 4444333322111000000 000123567899999999888887777654321 11 11121 2345543322 3
Q ss_pred Hhhhccc----c-CCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 258 NSSIGRF----Q-NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 258 ~~s~~~~----g-~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
+...+.. . ...+...++.||+++|+++|++. +|++|+++++|++|..+ ++++ .|++.+|+++.||+||+
T Consensus 189 ~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~v-~v~~~~g~~~~ad~VI~ 262 (520)
T 1s3e_A 189 VKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDL---LGDRVKLERPVIYIDQT--RENV-LVETLNHEMYEAKYVIS 262 (520)
T ss_dssp HHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHH---HGGGEESSCCEEEEECS--SSSE-EEEETTSCEEEESEEEE
T ss_pred HhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHH---cCCcEEcCCeeEEEEEC--CCeE-EEEECCCeEEEeCEEEE
Confidence 3221110 0 00122568999999999998764 48899999999999876 5554 48888999999999997
Q ss_pred C-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCC
Q 014049 333 D-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (431)
Q Consensus 333 ~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 376 (431)
+ |...+.++. ++|+||..+....+...++.+.+..+.+++++
T Consensus 263 a~p~~~l~~l~--~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (520)
T 1s3e_A 263 AIPPTLGMKIH--FNPPLPMMRNQMITRVPLGSVIKCIVYYKEPF 305 (520)
T ss_dssp CSCGGGGGGSE--EESCCCHHHHHHTTSCCBCCEEEEEEECSSCG
T ss_pred CCCHHHHccee--eCCCCCHHHHHHHHhCCCcceEEEEEEeCCCc
Confidence 5 544444543 45667766555445556778888888888886
No 10
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.92 E-value=4.8e-24 Score=213.73 Aligned_cols=292 Identities=11% Similarity=0.108 Sum_probs=177.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (431)
+.++||||||||++||+||.+|+++|++|+|||+++++||++++.+.+
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~-------------------------------- 50 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTID-------------------------------- 50 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEET--------------------------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccC--------------------------------
Confidence 456899999999999999999999999999999999999999987643
Q ss_pred cccCCCCceeeecCCCeEEee-CchHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhccCCCChHHHHHH
Q 014049 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (431)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (431)
++.+|+ |++++.. ...+.+++.+.|+..+..+......+. ..+|+...+.... ..+++.....+
T Consensus 51 -------g~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~~~~~~~------~~~~~~~~~~~ 115 (453)
T 2yg5_A 51 -------GAVLEI-GGQWVSPDQTALISLLDELGLKTFERYREGESVYI-SSAGERTRYTGDS------FPTNETTKKEM 115 (453)
T ss_dssp -------TEEEEC-SCCCBCTTCHHHHHHHHHTTCCEEECCCCSEEEEE-CTTSCEEEECSSS------CSCCHHHHHHH
T ss_pred -------Cceecc-CCeEecCccHHHHHHHHHcCCcccccccCCCEEEE-eCCCceeeccCCC------CCCChhhHHHH
Confidence 234566 4665433 346778888888876555433222222 2125544443210 01223222223
Q ss_pred HHHHHHHHcc----cCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcCCCCcchhhh-hhchhhHHHH
Q 014049 179 MRFFKLVQGH----LSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEY-VLKTRDGINR 253 (431)
Q Consensus 179 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~ 253 (431)
.+++..+... ....++.. .....+.+.++.+|++++..++.++.++.... ...+..++ . ++|+...+..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~s~~~~~~~ 189 (453)
T 2yg5_A 116 DRLIDEMDDLAAQIGAEEPWAH---PLARDLDTVSFKQWLINQSDDAEARDNIGLFI-AGGMLTKP--AHSFSALQAVLM 189 (453)
T ss_dssp HHHHHHHHHHHHHHCSSCGGGS---TTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHH-CCCCCCSC--TTSSBHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCCC---cchhhhhhccHHHHHHhhcCCHHHHHHHHHHH-HhhcccCC--cccccHHHHHHH
Confidence 3322222111 11111000 00123457899999999888888887655432 12222222 2 3455443332
Q ss_pred HHHHHhhhccc----cCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCE
Q 014049 254 LALYNSSIGRF----QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (431)
Q Consensus 254 ~~~~~~s~~~~----g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~ 329 (431)
+...+.+ ....+..++++||+++|+++|++. +|++|+++++|++|..+ +++.+.|++ +|++++||+
T Consensus 190 ----~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~~v~v~~-~~~~~~ad~ 259 (453)
T 2yg5_A 190 ----AASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEA---LGDDVFLNAPVRTVKWN--ESGATVLAD-GDIRVEASR 259 (453)
T ss_dssp ----HHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHH---HGGGEECSCCEEEEEEE--TTEEEEEET-TTEEEEEEE
T ss_pred ----hccCCcHhhhccCCCcceEEEcCChHHHHHHHHHh---cCCcEEcCCceEEEEEe--CCceEEEEE-CCeEEEcCE
Confidence 2221111 000012568999999999998764 48999999999999987 555245764 788999999
Q ss_pred EEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCC
Q 014049 330 LVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (431)
Q Consensus 330 VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 376 (431)
||++ |...+.+++ ++++||..+....+...++.+.+..+.+++++
T Consensus 260 VI~a~p~~~~~~l~--~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (453)
T 2yg5_A 260 VILAVPPNLYSRIS--YDPPLPRRQHQMHQHQSLGLVIKVHAVYETPF 305 (453)
T ss_dssp EEECSCGGGGGGSE--EESCCCHHHHHHGGGEEECCEEEEEEEESSCG
T ss_pred EEEcCCHHHHhcCE--eCCCCCHHHHHHHhcCCCcceEEEEEEECCCC
Confidence 9975 544445543 34556665444333344667788888888875
No 11
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.92 E-value=3.4e-24 Score=217.82 Aligned_cols=342 Identities=13% Similarity=0.085 Sum_probs=194.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (431)
...+||+|||||++||+||+.|+++|++|+|||+++++||++++++.+
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~-------------------------------- 58 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQD-------------------------------- 58 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEET--------------------------------
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccC--------------------------------
Confidence 346899999999999999999999999999999999999999997543
Q ss_pred cccCCCCceeeecCCCeEEeeC-chHHHHHHhcCcccccccccccc-eeeeccCCceeecCCChhhhhccCCCChHHHHH
Q 014049 100 LLSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDA-TFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (431)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~~-~~~~~~l~~~~~~~~~~f~~~~~-~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~ 177 (431)
++.+|. |++++... ..+.+++.+.|+.+.+.|..... .|.+ .+|+.+.+|.+...++....++..++..
T Consensus 59 -------g~~~~~-g~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~-~~g~~~~~p~~~~~~~~~~~~~~~~~~~ 129 (504)
T 1sez_A 59 -------GLIWDE-GANTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIA-RNGTPVLLPSNPIDLIKSNFLSTGSKLQ 129 (504)
T ss_dssp -------TEEEES-SCCCBCCCSHHHHHHHHHTTCGGGEECCSSCCCEEEE-SSSSEEECCSSHHHHHHSSSSCHHHHHH
T ss_pred -------CeEEec-CCcccccCcHHHHHHHHHcCCcccceeccCCCceEEE-ECCeEEECCCCHHHHhccccCCHHHHHH
Confidence 355677 57776543 46788899999877666543222 3334 3788888888766665555565544433
Q ss_pred HHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHH-HHhcCCCCcchhhhhhchhhHHHHHHH
Q 014049 178 LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYVLKTRDGINRLAL 256 (431)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~ 256 (431)
+. .......... . . .....+.++.+|+++..-++.++.++.. .... +..++ .++|+...+..+..
T Consensus 130 ~~--~~~~~~~~~~-~-----~--~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~s~~~~~~~~~~ 195 (504)
T 1sez_A 130 ML--LEPILWKNKK-L-----S--QVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGT--CGGDP--DSLSMHHSFPELWN 195 (504)
T ss_dssp HH--THHHHC------------------CCCBHHHHHHHHHCHHHHHTTHHHHHHHH--HSCCG--GGSBHHHHCHHHHH
T ss_pred Hh--HhhhccCccc-c-----c--ccCCCCccHHHHHHHHcCHHHHHHHHHHHHccc--cCCCh--HHhhHHHHhHHHHH
Confidence 21 1111110000 0 0 0113458999999865323333333321 1111 11222 23454433322221
Q ss_pred HHhh------------hccccC-------------CCccEEeecCCcchHHHHHHHHHHhcC-cEEEeCcceeEEEEecC
Q 014049 257 YNSS------------IGRFQN-------------ALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQN 310 (431)
Q Consensus 257 ~~~s------------~~~~g~-------------~~~~~~~p~gG~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~ 310 (431)
+... +...+. ....+++++||+++|+++|++ .+| ++|++|++|++|..+
T Consensus 196 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~---~l~~~~i~~~~~V~~I~~~-- 270 (504)
T 1sez_A 196 LEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICK---DLREDELRLNSRVLELSCS-- 270 (504)
T ss_dssp HHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHT---TSCTTTEETTCCEEEEEEE--
T ss_pred HHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHHHHHHHHHh---hcccceEEcCCeEEEEEec--
Confidence 1110 000000 001257899999999998875 456 899999999999987
Q ss_pred CCc-----EEEEEeC--CC---cEEEeCEEEEC-CCCCCCCCCCC-chhhhhhhhhhhcccCCCCeEEEEEEEeCCCC-C
Q 014049 311 SGS-----YKGVRLA--SG---QDILSHKLVLD-PSFTVPGSLAS-SHQQLQESFQAFSLSDNKGKVARGICITRSSL-K 377 (431)
Q Consensus 311 ~g~-----~~gV~~~--~G---~~i~Ad~VI~~-p~~~~~~l~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~-~ 377 (431)
+++ .+.|++. +| ++++||+||++ |...+.+++.. ..++++... + +...+..+.+..+.+++++ .
T Consensus 271 ~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~--l-~~~~~~~~~~v~l~~~~~~~~ 347 (504)
T 1sez_A 271 CTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNF--I-PEVDYVPLSVVITTFKRENVK 347 (504)
T ss_dssp CSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTT--S-CCCCEEEEEEEEEEEEGGGBS
T ss_pred CCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccHHH--H-hcCCCCceEEEEEEEchhhcC
Confidence 443 2456554 46 67899999975 44333444310 011122111 1 1223445666666677753 3
Q ss_pred CCCCceEEEeCCCCCCCCCCCeEEEEEec-CCCccCCCCcEEEEEEcCC
Q 014049 378 PDLSNFLVIFPPRSLFPEQVTSIRVLQLG-GNLAVCPLGMVSLDLLSPL 425 (431)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~i~v~~~~-~~~~~aP~G~~~~~i~~~~ 425 (431)
.....+.+++|+..... ..+..-+...+ ..+..+|+|+.++...+.-
T Consensus 348 ~~~~~~~~l~~~~~~~~-g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g 395 (504)
T 1sez_A 348 YPLEGFGVLVPSKEQQH-GLKTLGTLFSSMMFPDRAPNNVYLYTTFVGG 395 (504)
T ss_dssp SCCCSSEEECCGGGGGG-TCCSSEEEEHHHHCGGGSCTTEEEEEEEEES
T ss_pred CCCCceEEEcCCCCCCC-CCccceEEeeccccCCcCCCCCEEEEEEeCC
Confidence 33345667777432110 01111122222 3566789998887766543
No 12
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.92 E-value=1.4e-24 Score=221.06 Aligned_cols=319 Identities=15% Similarity=0.089 Sum_probs=173.8
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 014049 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~-~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (431)
.+||||||||++||+||++|++ .|++|+|||+++++||+++|+..
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~---------------------------------- 55 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVT---------------------------------- 55 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEEC----------------------------------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEe----------------------------------
Confidence 5899999999999999999998 49999999999999999998532
Q ss_pred ccCCCCceeeecCCCeEEeeCc-hHHHHHHhcCcccccccccccce-eeeccCCceeecCCChhhhhccCCCChHHHHHH
Q 014049 101 LSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDAT-FMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (431)
Q Consensus 101 ~~~~~~~~~~dl~Gp~~~~~~~-~~~~~l~~~~~~~~~~f~~~~~~-~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (431)
..+|.+|. ||++++... .+.+++.+.+... .+|...++. +++ .+|+.+++|... .+. .+........
T Consensus 56 ----~~G~~~D~-G~h~~~~~~~~v~~l~~e~~~~~-~~~~~~~~~~~i~-~~g~~~~~p~~~-~~~---~~~~~~~~~~ 124 (513)
T 4gde_A 56 ----PEGFLYDV-GGHVIFSHYKYFDDCLDEALPKE-DDWYTHQRISYVR-CQGQWVPYPFQN-NIS---MLPKEEQVKC 124 (513)
T ss_dssp ----TTSCEEES-SCCCCCCCBHHHHHHHHHHSCSG-GGEEEEECCEEEE-ETTEEEESSGGG-GGG---GSCHHHHHHH
T ss_pred ----cCCEEEEe-CceEecCCCHHHHHHHHHhCCcc-ceeEEecCceEEE-ECCeEeecchhh-hhh---hcchhhHHHH
Confidence 13567888 698876655 5666777665422 233333332 333 378888887532 111 2233333222
Q ss_pred -HHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHH--HHHhcCCCCcchhhhhhchhhHH----
Q 014049 179 -MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGI---- 251 (431)
Q Consensus 179 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~s~~~~~---- 251 (431)
..++....... .......++.+|+.+.. .+.+.+.+. +...++.... .+++.....
T Consensus 125 ~~~~~~~~~~~~------------~~~~~~~s~~~~~~~~~-g~~l~~~~~~~~~~~~~~~~~----~~ls~~~~~~~~~ 187 (513)
T 4gde_A 125 IDGMIDAALEAR------------VANTKPKTFDEWIVRMM-GTGIADLFMRPYNFKVWAVPT----TKMQCAWLGERVA 187 (513)
T ss_dssp HHHHHHHHHHHH------------TCCSCCCSHHHHHHHHH-HHHHHHHTHHHHHHHHHSSCG----GGBCSGGGCSSCC
T ss_pred HHHHHHHHHhhh------------cccccccCHHHHHHHhh-hhhhhhhhcchhhhhhccCCh----HHhhHHHHHHhhc
Confidence 22222211110 01123456777765421 111222111 1111111111 112221110
Q ss_pred -----HHHHHHHh--hhccccCCCccEEe-ecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCc
Q 014049 252 -----NRLALYNS--SIGRFQNALGALIY-PIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ 323 (431)
Q Consensus 252 -----~~~~~~~~--s~~~~g~~~~~~~~-p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~ 323 (431)
......+. ....++.. ..+.+ ++||+++|+++|++.+...|++|+++++|++|..+ ++ .|++.+|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~--~~---~v~~~~G~ 261 (513)
T 4gde_A 188 APNLKAVTTNVILGKTAGNWGPN-ATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNAN--NK---TVTLQDGT 261 (513)
T ss_dssp CCCHHHHHHHHHHTCCCCSCBTT-BEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETT--TT---EEEETTSC
T ss_pred ccchhhhhhhhhhcccccccccc-cceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEcc--CC---EEEEcCCC
Confidence 01111111 01111111 12344 58999999999999999999999999999999875 55 35578999
Q ss_pred EEEeCEEEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCCC-CCCceEEEeCCCCCCCCCCCeEE
Q 014049 324 DILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP-DLSNFLVIFPPRSLFPEQVTSIR 401 (431)
Q Consensus 324 ~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ 401 (431)
++.||+||++ |...+..++. ++++.... ....+..+....+.++.+... ....+.+.+|....+ .-.
T Consensus 262 ~~~ad~vI~t~P~~~l~~~l~--~~~~~~~~----~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~-----f~R 330 (513)
T 4gde_A 262 TIGYKKLVSTMAVDFLAEAMN--DQELVGLT----KQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCP-----FYR 330 (513)
T ss_dssp EEEEEEEEECSCHHHHHHHTT--CHHHHHHH----TTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCS-----CSE
T ss_pred EEECCEEEECCCHHHHHHhcC--chhhHhhh----hcccCCceEEEEEEEeccccccccccceeeccCCCCc-----eeE
Confidence 9999999975 4333333331 11122211 122334444444445554322 234566777654332 223
Q ss_pred EEEec-CCCccCCCCcEEE
Q 014049 402 VLQLG-GNLAVCPLGMVSL 419 (431)
Q Consensus 402 v~~~~-~~~~~aP~G~~~~ 419 (431)
+..++ ..+..+|+|...+
T Consensus 331 i~~~~n~sp~~~p~~~~~~ 349 (513)
T 4gde_A 331 ATIFSNYSPYNQPEASAAL 349 (513)
T ss_dssp EECGGGTCGGGSCCTTCCE
T ss_pred EEecCCCCcccCCCCCceE
Confidence 44444 2455666665444
No 13
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.91 E-value=7.1e-24 Score=213.21 Aligned_cols=327 Identities=13% Similarity=0.144 Sum_probs=184.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCC------CcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCccccccccc
Q 014049 22 AFDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISN 95 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G------~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (431)
++||||||||++||+||.+|+++| ++|+|||+++++||+++|...+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~---------------------------- 56 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKD---------------------------- 56 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCT----------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccC----------------------------
Confidence 489999999999999999999999 9999999999999999997643
Q ss_pred cccccccCCCCceeeecCCCeEEee-CchHHHHHHhcCcccccccccccceeeeccCCceeecCCCh--------hhhhc
Q 014049 96 YASRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSR--------AAIFK 166 (431)
Q Consensus 96 ~~~~~~~~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~--------~~~~~ 166 (431)
++.+|. |++++.. ...+.+++.+.|+...+........+++. +|+...+|... ..++.
T Consensus 57 -----------g~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~p~~~~~~~~ 123 (470)
T 3i6d_A 57 -----------GYIIER-GPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLV-NRTLHPMPKGAVMGIPTKIAPFVS 123 (470)
T ss_dssp -----------TCCEES-SCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEEC-SSCEEECCC---------------
T ss_pred -----------CEEecc-ChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEE-CCEEEECCCCcccCCcCchHHhhc
Confidence 344566 5765533 34677888899987665432223344443 67777766431 11111
Q ss_pred cCCCChHHHHHHHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHH-HHhcCCCCcchhhhhh
Q 014049 167 DKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYVL 245 (431)
Q Consensus 167 ~~~l~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~ 245 (431)
...++..++.. ........ ......+.++.+|+++....+....++.. ..+. +..+. .++
T Consensus 124 ~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~ 184 (470)
T 3i6d_A 124 TGLFSLSGKAR--AAMDFILP-------------ASKTKDDQSLGEFFRRRVGDEVVENLIEPLLSGI--YAGDI--DKL 184 (470)
T ss_dssp ------CCSHH--HHHHHHSC-------------CCSSSSCCBHHHHHHHHSCHHHHHHTHHHHHHHT--TCSCT--TTB
T ss_pred cCcCCHHHHHH--HhcCcccC-------------CCCCCCCcCHHHHHHHhcCHHHHHHhccchhcEE--ecCCH--HHh
Confidence 11122111111 01111100 01234567999999874333323332221 1122 22222 224
Q ss_pred chhhHHHHHHHHHhhhccc-----------------cCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEe
Q 014049 246 KTRDGINRLALYNSSIGRF-----------------QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (431)
Q Consensus 246 s~~~~~~~~~~~~~s~~~~-----------------g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~ 308 (431)
+....+..+..+....+.. ....+.+++++||++.|+++|++.+.. ++|+++++|++|..+
T Consensus 185 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~ 262 (470)
T 3i6d_A 185 SLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHS 262 (470)
T ss_dssp BHHHHCGGGCC-------------------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEEC
T ss_pred hHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEc
Confidence 4433222211110000000 000124778999999999988765433 799999999999886
Q ss_pred cCCCcEEEEEeCCCcEEEeCEEEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCCC-CCCceEEE
Q 014049 309 QNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP-DLSNFLVI 386 (431)
Q Consensus 309 ~~~g~~~gV~~~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~ 386 (431)
+++ +.|++++|++++||+||++ |...+.+++. ++++.... +...+..+.+..+.+++++-+ +.....++
T Consensus 263 --~~~-~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~--~~~~~~~~----~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l 333 (470)
T 3i6d_A 263 --GSC-YSLELDNGVTLDADSVIVTAPHKAAAGMLS--ELPAISHL----KNMHSTSVANVALGFPEGSVQMEHEGTGFV 333 (470)
T ss_dssp --SSS-EEEEESSSCEEEESEEEECSCHHHHHHHTT--TSTTHHHH----HTCEEEEEEEEEEEESSTTCCCSSCSSEEE
T ss_pred --CCe-EEEEECCCCEEECCEEEECCCHHHHHHHcC--CchhhHHH----hcCCCCceEEEEEEECchhcCCCCCCeEEE
Confidence 444 5788889989999999964 4443333331 22233222 223456677777788887632 23345566
Q ss_pred eCCCCCCCCCCCeEEEEEecC--CCccCCCCcEEEEEEcC
Q 014049 387 FPPRSLFPEQVTSIRVLQLGG--NLAVCPLGMVSLDLLSP 424 (431)
Q Consensus 387 ~~~~~~~~~~~~~i~v~~~~~--~~~~aP~G~~~~~i~~~ 424 (431)
+|... ...++.....+ .+..+|+|+.++.+.+-
T Consensus 334 ~~~~~-----~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~ 368 (470)
T 3i6d_A 334 ISRNS-----DFAITACTWTNKKWPHAAPEGKTLLRAYVG 368 (470)
T ss_dssp ECSTT-----CCSEEEEEEHHHHCGGGSCTTCEEEEEEEC
T ss_pred ccCCC-----CCCceEEEEEcCcCCCcCCCCCEEEEEEEC
Confidence 66532 22333333221 35678999888877763
No 14
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.91 E-value=1.1e-23 Score=212.54 Aligned_cols=327 Identities=13% Similarity=0.097 Sum_probs=185.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--cEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 014049 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~--~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (431)
+||+|||||++||+||++|+++|+ +|+|||+++++||+++++...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~--------------------------------- 49 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGP--------------------------------- 49 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECT---------------------------------
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEecc---------------------------------
Confidence 699999999999999999999999 999999999999999996532
Q ss_pred ccCCCCceeeecCCCeEEeeC----chHHHHHHhcCccccccccc-----ccceeeeccCCceeecCCChhhhhcc-CCC
Q 014049 101 LSQHPRNFNLDVSGPRVLFCA----DHAVDLMLKSGASHYLEFKS-----IDATFMLDADAKLCSVPDSRAAIFKD-KSL 170 (431)
Q Consensus 101 ~~~~~~~~~~dl~Gp~~~~~~----~~~~~~l~~~~~~~~~~f~~-----~~~~~~~~~~g~~~~~p~~~~~~~~~-~~l 170 (431)
.++.+|. ||+.+... ..+.+++.+.|+.+.+.... ....|++. +|+..++|.+...++.. ..+
T Consensus 50 -----~g~~~d~-G~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~ 122 (477)
T 3nks_A 50 -----NGAIFEL-GPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYV-GGALHALPTGLRGLLRPSPPF 122 (477)
T ss_dssp -----TSCEEES-SCCCBCCCHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEE-TTEEEECCCSSCC---CCTTS
T ss_pred -----CCeEEEe-CCCcccCCCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEE-CCEEEECCCChhhcccccchh
Confidence 2355677 57765442 24667788888865433211 11234443 78888888754333321 111
Q ss_pred ChHHHHHHHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHH-HHHHH-HhcCCCCcchhhhhhchh
Q 014049 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVLYA-IAMADYDQEVSEYVLKTR 248 (431)
Q Consensus 171 ~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~~~~~-~~~~~~~~~~~~~~~s~~ 248 (431)
... .+.+.+ ...... .....+.++.+|+++.. .+.+.+ ++... .+. +..+. .++|..
T Consensus 123 ~~~---~~~~~~---~~~~~~----------~~~~~~~s~~~~~~~~~-g~~~~~~~~~~~~~~~--~~~~~--~~ls~~ 181 (477)
T 3nks_A 123 SKP---LFWAGL---RELTKP----------RGKEPDETVHSFAQRRL-GPEVASLAMDSLCRGV--FAGNS--RELSIR 181 (477)
T ss_dssp CSC---SSHHHH---TTTTSC----------CCCSSCCBHHHHHHHHH-CHHHHHHTHHHHHHHH--HSSCT--TTBBHH
T ss_pred hhH---HHHHHH---HhhhcC----------CCCCCCcCHHHHHHHhh-CHHHHHHHHHHHhccc--ccCCH--HHhhHH
Confidence 111 111111 111100 11234678999998632 222222 22111 111 11221 235555
Q ss_pred hHHHHHHHHHhhhccc----------------------cCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEE
Q 014049 249 DGINRLALYNSSIGRF----------------------QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLL 306 (431)
Q Consensus 249 ~~~~~~~~~~~s~~~~----------------------g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~ 306 (431)
..+..+..+....+.. ......+++++||++.|+++|++.++..|++|+++++|++|.
T Consensus 182 ~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~ 261 (477)
T 3nks_A 182 SCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLS 261 (477)
T ss_dssp HHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEE
T ss_pred HHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEE
Confidence 5444333221111100 000113789999999999999999999999999999999998
Q ss_pred EecCCCcEEEEEeCCCcEEEeCEEEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCCCCCCceEE
Q 014049 307 TDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLV 385 (431)
Q Consensus 307 ~~~~~g~~~gV~~~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 385 (431)
.+ +++.+.|++ +|++++||+||++ |.+.+..++....+++.+ .+. ...+..+.+..+.+++++-+. .....
T Consensus 262 ~~--~~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~ll~~~~~~~~~---~l~-~~~~~~~~~v~l~~~~~~~~~-~~~g~ 333 (477)
T 3nks_A 262 LQ--AEGRWKVSL-RDSSLEADHVISAIPASVLSELLPAEAAPLAR---ALS-AITAVSVAVVNLQYQGAHLPV-QGFGH 333 (477)
T ss_dssp EC--GGGCEEEEC-SSCEEEESEEEECSCHHHHHHHSCGGGHHHHH---HHH-TCCEEEEEEEEEEETTCCCSS-CSSEE
T ss_pred Ec--CCceEEEEE-CCeEEEcCEEEECCCHHHHHHhccccCHHHHH---HHh-cCCCCcEEEEEEEECCCCCCC-CCceE
Confidence 76 444457765 6678999999975 444334443222222222 222 224556666666778875322 23355
Q ss_pred EeCCCCCCCCCCCeEEEEEecC--CCccC-CCCcEEEEEEc
Q 014049 386 IFPPRSLFPEQVTSIRVLQLGG--NLAVC-PLGMVSLDLLS 423 (431)
Q Consensus 386 ~~~~~~~~~~~~~~i~v~~~~~--~~~~a-P~G~~~~~i~~ 423 (431)
++|+.. +..+.-..+++ -+..+ |+|+.++.+++
T Consensus 334 l~~~~~-----~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~ 369 (477)
T 3nks_A 334 LVPSSE-----DPGVLGIVYDSVAFPEQDGSPPGLRVTVML 369 (477)
T ss_dssp ECCTTT-----CSSEEEEECHHHHCGGGSTTTTCEEEEEEE
T ss_pred EccCCC-----CCCceEEEEeccccCCCCCCCCceEEEEEE
Confidence 566432 11232333332 22222 34778777665
No 15
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.91 E-value=5e-24 Score=216.10 Aligned_cols=295 Identities=15% Similarity=0.113 Sum_probs=178.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (431)
+||+|||||++||+||..|+++|++|+|||+++++||+++|++.+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~----------------------------------- 84 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNID----------------------------------- 84 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEET-----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccC-----------------------------------
Confidence 899999999999999999999999999999999999999997643
Q ss_pred CCCCceeeecCCCeEEee-CchHHHHHHhcCccccccccc----ccceeeeccC--CceeecCCChhhhhccCCCChHHH
Q 014049 103 QHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKS----IDATFMLDAD--AKLCSVPDSRAAIFKDKSLGLMEK 175 (431)
Q Consensus 103 ~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~~~~~~~~f~~----~~~~~~~~~~--g~~~~~p~~~~~~~~~~~l~~~~k 175 (431)
++.+|+ |++++.. ...+.+++.+.|+.+.+.... ....|.+. + |+...+|.. +... .-.
T Consensus 85 ----g~~~d~-G~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~--~~~~------~~~ 150 (495)
T 2vvm_A 85 ----GYPYEM-GGTWVHWHQSHVWREITRYKMHNALSPSFNFSRGVNHFQLR-TNPTTSTYMTHE--AEDE------LLR 150 (495)
T ss_dssp ----TEEEEC-SCCCBCTTSHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEE-SSTTCCEEECHH--HHHH------HHH
T ss_pred ----CeeecC-CCeEecCccHHHHHHHHHcCCcceeecccccCCCceEEEec-CCCCceeecCHH--HHHH------HHH
Confidence 355777 6887643 346778888888855443322 12233332 3 444444421 1100 001
Q ss_pred HHHHHHHH----HHHcccCCCccccccccccccccCCcHHHHHHhcC--CChhHHHHHHHHHhcCCCCcchhhhhhchhh
Q 014049 176 NQLMRFFK----LVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK--LPHKIKSIVLYAIAMADYDQEVSEYVLKTRD 249 (431)
Q Consensus 176 ~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 249 (431)
..+.+|++ ..+..... +..........++.+.|+.+|+++++ .++.++.++...+... +..+. +++|+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s~~~ 226 (495)
T 2vvm_A 151 SALHKFTNVDGTNGRTVLPF-PHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLC-SGGTL--ENSSFGE 226 (495)
T ss_dssp HHHHHHHCSSSSTTTTTCSC-TTSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHH-HSSCT--TTSBHHH
T ss_pred HHHHHHHccchhhhhhcCCC-CCCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHh-cCCCc--chhhHHH
Confidence 11222222 11111000 00000000012345789999999877 7777776654321110 11111 2245544
Q ss_pred HHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcC-cEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeC
Q 014049 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSH 328 (431)
Q Consensus 250 ~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad 328 (431)
.+..+......+..+.. ....++++||+++|+++|.+.+...| ++|+++++|++|..+ ++. +.|++.+|++++||
T Consensus 227 ~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad 302 (495)
T 2vvm_A 227 FLHWWAMSGYTYQGCMD-CLMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE--RDA-ARVTARDGREFVAK 302 (495)
T ss_dssp HHHHHHHTTSSHHHHHH-HHHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC--SSS-EEEEETTCCEEEEE
T ss_pred HHHHHHHcCCCHHHHHh-hhceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcC
Confidence 43322211000000000 01156899999999999999999898 999999999999876 444 56888889899999
Q ss_pred EEEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCC
Q 014049 329 KLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (431)
Q Consensus 329 ~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 376 (431)
+||++ |...+..+. ++|+||..+....+...+..+.+..+.+++++
T Consensus 303 ~vI~a~~~~~l~~i~--~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~ 349 (495)
T 2vvm_A 303 RVVCTIPLNVLSTIQ--FSPALSTERISAMQAGHVSMCTKVHAEVDNKD 349 (495)
T ss_dssp EEEECCCGGGGGGSE--EESCCCHHHHHHHHHCCCCCCEEEEEEESCGG
T ss_pred EEEECCCHHHHhhee--eCCCCCHHHHHHHHhcCCCceeEEEEEECCcc
Confidence 99965 444444442 45666655444333445667788888888865
No 16
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.91 E-value=3.2e-23 Score=209.06 Aligned_cols=327 Identities=15% Similarity=0.166 Sum_probs=193.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G--~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (431)
.++||+|||||++||+||..|+++| ++|+|||+++++||++++....
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~------------------------------- 51 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYRED------------------------------- 51 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECST-------------------------------
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeC-------------------------------
Confidence 4689999999999999999999999 9999999999999999997643
Q ss_pred ccccCCCCceeeecCCCeEEee-CchHHHHHHhcCcccccccccccceeeeccCCceeecCCC--------hhhhhccCC
Q 014049 99 RLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDS--------RAAIFKDKS 169 (431)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~~~~~-~~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~--------~~~~~~~~~ 169 (431)
++.+|. |++.+.. ...+.+++.+.|+...+........+++. +|+...+|.. ...++....
T Consensus 52 --------g~~~~~-g~~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~p~~~~~~~~~~~ 121 (475)
T 3lov_A 52 --------GFTIER-GPDSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILD-TGGLHPIPKGAVMGIPTDLDLFRQTTL 121 (475)
T ss_dssp --------TCCEES-SCCCEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEE-TTEEEECCSSEETTEESCHHHHTTCSS
T ss_pred --------CEEEec-CchhhhcccHHHHHHHHHcCCcceEeecCCCceEEEE-CCEEEECCCcccccCcCchHHHhhccC
Confidence 334566 5665533 34678888899987654433223344443 6777776643 344455556
Q ss_pred CChHHHHHHHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHH-HhcCCCCcchhhhhhchh
Q 014049 170 LGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYA-IAMADYDQEVSEYVLKTR 248 (431)
Q Consensus 170 l~~~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~s~~ 248 (431)
++..++..+..+ ...... .......+.++.+|+++....+....++... .+. +..+. +++++.
T Consensus 122 ~~~~~~~~~~~~---~~~~~~---------~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~--~~ls~~ 185 (475)
T 3lov_A 122 LTEEEKQEVADL---LLHPSD---------SLRIPEQDIPLGEYLRPRLGDALVEKLIEPLLSGI--YAGNI--DQMSTF 185 (475)
T ss_dssp SCHHHHHHHHHH---HHSCCT---------TCCCCSSCCBHHHHHHHHHCHHHHHHTHHHHHHGG--GCCCT--TTSBST
T ss_pred CChhHHHHhhCc---ccCCcc---------cccCCCCCcCHHHHHHHHhCHHHHHHHHHHHhcee--ecCCh--HHcCHH
Confidence 666555422222 111100 0011345689999998732222222222211 122 22222 234554
Q ss_pred hHHHHHHHHHhhhccc-------c-------------CCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEe
Q 014049 249 DGINRLALYNSSIGRF-------Q-------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (431)
Q Consensus 249 ~~~~~~~~~~~s~~~~-------g-------------~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~ 308 (431)
..+..+..+....+.. . ...+.+++++||++.|+++|++.+.. ++|+++++|++|..+
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~ 263 (475)
T 3lov_A 186 ATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRE 263 (475)
T ss_dssp TTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEE
T ss_pred HHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEe
Confidence 4444333222111100 0 00134788999999999998775433 799999999999887
Q ss_pred cCCCcEEEEEeCCCcEEEeCEEEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCCCCCCceEEEe
Q 014049 309 QNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIF 387 (431)
Q Consensus 309 ~~~g~~~gV~~~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 387 (431)
+++ +.|++.+| +++||+||++ |...+.+++. ++++ +. + +...+..+.+..+.+++++........+++
T Consensus 264 --~~~-~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~--~~~~-~~---~-~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~ 332 (475)
T 3lov_A 264 --DGR-YRLKTDHG-PEYADYVLLTIPHPQVVQLLP--DAHL-PE---L-EQLTTHSTATVTMIFDQQQSLPIEGTGFVV 332 (475)
T ss_dssp --TTE-EEEECTTC-CEEESEEEECSCHHHHHHHCT--TSCC-HH---H-HTCCEEEEEEEEEEEECCSSCSSSSSEEEE
T ss_pred --CCE-EEEEECCC-eEECCEEEECCCHHHHHHHcC--ccCH-HH---H-hcCCCCeEEEEEEEECCcCCCCCCCEEEEe
Confidence 554 56888888 7999999965 5443334331 2222 11 1 223466777788888988732234445666
Q ss_pred CCCCCCCCCCCeEEEEEecC--CCccCCCCcEEEEEEc
Q 014049 388 PPRSLFPEQVTSIRVLQLGG--NLAVCPLGMVSLDLLS 423 (431)
Q Consensus 388 ~~~~~~~~~~~~i~v~~~~~--~~~~aP~G~~~~~i~~ 423 (431)
|+.. ...++-....+ .+..+|+ ..++...+
T Consensus 333 ~~~~-----~~~~~~~~~~s~~~~~~~p~-~~~l~~~~ 364 (475)
T 3lov_A 333 NRRA-----PYSITACTAIDQKWNHSAPD-HTVLRAFV 364 (475)
T ss_dssp CTTS-----SCSEEEEEEHHHHCTTTCTT-EEEEEEEE
T ss_pred cCCC-----CCceEEEEEEcccCCCCCCC-cEEEEEEe
Confidence 6542 22333333322 3456676 55555544
No 17
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.88 E-value=2.3e-22 Score=202.90 Aligned_cols=322 Identities=14% Similarity=0.113 Sum_probs=181.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CcEEEEccCCCCCCccccc-ChhhhhhhhhcCCCCCCCCCCCcccccccccccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSL-SIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G-~~V~vlE~~~~~GG~~~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (431)
..+||+|||||++||+||..|+++| ++|+|+|+++++||+++++ ..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~-------------------------------- 55 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDE-------------------------------- 55 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECT--------------------------------
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecC--------------------------------
Confidence 4689999999999999999999999 8999999999999999985 32
Q ss_pred ccccCCCCceeeecCCCeEEeeCc-hHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhccCCCChHHHHH
Q 014049 99 RLLSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (431)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~~~~~~~-~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~ 177 (431)
.++.+|. |++.++... .+.+++.+.. .++...... .+++. +|+++.+|... .+ ..++..++..
T Consensus 56 -------~g~~~~~-g~~~~~~~~~~~~~l~~~~~-~~~~~~~~~--~~~~~-~g~~~~~P~~~--~~--~~l~~~~~~~ 119 (484)
T 4dsg_A 56 -------NGFTWDL-GGHVIFSHYQYFDDVMDWAV-QGWNVLQRE--SWVWV-RGRWVPYPFQN--NI--HRLPEQDRKR 119 (484)
T ss_dssp -------TSCEEES-SCCCBCCSBHHHHHHHHHHC-SCEEEEECC--CEEEE-TTEEEESSGGG--CG--GGSCHHHHHH
T ss_pred -------CCcEEee-CCcccccChHHHHHHHHHHh-hhhhhccCc--eEEEE-CCEEEEeCccc--hh--hhCCHHHHHH
Confidence 2455677 577665544 4555555543 333322221 23333 78888888421 11 1233333322
Q ss_pred -HHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhH----HHHHHHHHhcCCCCcchhhhhhchhhH--
Q 014049 178 -LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKI----KSIVLYAIAMADYDQEVSEYVLKTRDG-- 250 (431)
Q Consensus 178 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~s~~~~-- 250 (431)
+..++..-.. .....+.++.+|+.+. +.+.+ ...+...+. ..++ +++|+...
T Consensus 120 ~~~~ll~~~~~--------------~~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~----~~~~--~~ls~~~~~~ 178 (484)
T 4dsg_A 120 CLDELVRSHAR--------------TYTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVW----AVPP--CLMSTEWVEE 178 (484)
T ss_dssp HHHHHHHHHHC--------------CCSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHH----SSCG--GGBCSSSCTT
T ss_pred HHHHHHHHHhc--------------cCCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhc----CCCH--HHhcHHHHhc
Confidence 3333332111 0123457888888753 11111 111111111 1111 12233211
Q ss_pred ------HHH-HHHHHhhhc--cccCCCccEEeec-CCcchHHHHHHHHHHhcCcEEEeC--cceeEEEEecCCCcEEEEE
Q 014049 251 ------INR-LALYNSSIG--RFQNALGALIYPI-YGQGELPQAFCRRAAVKGCLYVLR--MPVISLLTDQNSGSYKGVR 318 (431)
Q Consensus 251 ------~~~-~~~~~~s~~--~~g~~~~~~~~p~-gG~~~l~~al~r~~~~~Gg~i~l~--~~V~~I~~~~~~g~~~gV~ 318 (431)
+.. +...+.... .++ ..+.+.||. ||+++|+++|++.+.. .+|+++ ++|++|..+ ++ +|+
T Consensus 179 r~~~~~l~~~~~~~~~~~~~~~~~-~~~~f~yp~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~--~~---~v~ 250 (484)
T 4dsg_A 179 RVAPVDLERIRRNIQENRDDLGWG-PNATFRFPQRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD--AK---TIT 250 (484)
T ss_dssp TSCCCCHHHHHHHHHHTCCCCCCS-TTSEEEEESSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEETT--TT---EEE
T ss_pred cccCCCHHHHHHHHhhcccccCCC-ccceEEeecCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEec--CC---EEE
Confidence 111 111111110 011 112377876 8999999999875532 289999 569999875 55 355
Q ss_pred eCCCcEEEeCEEEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCCCC-CCceEEEeCCCCCCCCC
Q 014049 319 LASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD-LSNFLVIFPPRSLFPEQ 396 (431)
Q Consensus 319 ~~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~ 396 (431)
+++|+++.||+||++ |...+.+++.+..++++.......+...+..+.+..+.++++...+ ...+.+.+|...
T Consensus 251 ~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~----- 325 (484)
T 4dsg_A 251 FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDT----- 325 (484)
T ss_dssp ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTT-----
T ss_pred ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCC-----
Confidence 689999999999975 4433233331111123332222222334556666666677764322 345667777653
Q ss_pred CCeEEEEEecC-CCccCCCCcEEEEEEcC
Q 014049 397 VTSIRVLQLGG-NLAVCPLGMVSLDLLSP 424 (431)
Q Consensus 397 ~~~i~v~~~~~-~~~~aP~G~~~~~i~~~ 424 (431)
.+...+..++. ++..||+|+.++++-..
T Consensus 326 ~~~~ri~~~s~~~p~~ap~g~~~l~~e~~ 354 (484)
T 4dsg_A 326 SPFYRATVFSNYSKYNVPEGHWSLMLEVS 354 (484)
T ss_dssp CSCSEEECGGGTCGGGSCTTEEEEEEEEE
T ss_pred CeEEEEEeecCCCcccCCCCeEEEEEEEe
Confidence 23455666674 77899999988866543
No 18
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.86 E-value=2.3e-21 Score=197.40 Aligned_cols=278 Identities=15% Similarity=0.149 Sum_probs=154.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G-~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (431)
+..+||||||||++||+||..|+++| ++|+|||+++++||+++|++..
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~------------------------------- 54 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGY------------------------------- 54 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECG-------------------------------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecC-------------------------------
Confidence 45689999999999999999999999 9999999999999999997531
Q ss_pred ccccCCCCceeeecCCCeEEeeC--chHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhccCCCCh-HHH
Q 014049 99 RLLSQHPRNFNLDVSGPRVLFCA--DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL-MEK 175 (431)
Q Consensus 99 ~~~~~~~~~~~~dl~Gp~~~~~~--~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~-~~k 175 (431)
.++.+|+ |++++... ..+.+++.+.++.... ..+.+. ++....++.+...+........ .-.
T Consensus 55 -------~G~~~D~-G~~~~~~~~~~~~~~~~~~lg~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (516)
T 1rsg_A 55 -------QGRKYDI-GASWHHDTLTNPLFLEEAQLSLNDGR------TRFVFD-DDNFIYIDEERGRVDHDKELLLEIVD 119 (516)
T ss_dssp -------GGCEEES-SCCEECCTTTCHHHHHHHHHHHHHCC------CCEECC-CCCCEEEETTTEECTTCTTTCHHHHH
T ss_pred -------CCcEEec-CCeEEecCCCChHHHHHHHhCCCCcc------eeEEEC-CCCEEEEcCCCccccccHHHHHHHHH
Confidence 1355788 68887542 3566665555542110 011111 2332222221111100000000 001
Q ss_pred HHHHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhc------CCChhHHHHHHHHHhcCC--CCcchhhhhhch
Q 014049 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKM------KLPHKIKSIVLYAIAMAD--YDQEVSEYVLKT 247 (431)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~------~~~~~l~~~~~~~~~~~~--~~~~~~~~~~s~ 247 (431)
..+.++.... ... .....+.++.+|++++ .+.+....++...+.... +..+. ..++.
T Consensus 120 ~~~~~~~~~~---~~~----------~~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~--~~~s~ 184 (516)
T 1rsg_A 120 NEMSKFAELE---FHQ----------HLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDW--KLLSA 184 (516)
T ss_dssp HHHHHHHHHH---C-----------------CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCT--TTSBH
T ss_pred HHHHHHHHHH---hhh----------ccCCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCCh--HHCCh
Confidence 1222222211 100 0112356777776542 122221221111110000 00000 11222
Q ss_pred hhHHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEe
Q 014049 248 RDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILS 327 (431)
Q Consensus 248 ~~~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~A 327 (431)
.. .+. ...+ ...+++| ++.|+++|++.+. +++|++|++|++|..+ ++..+.|++.+|++++|
T Consensus 185 ~~-------~~~--~~~~----~~~~~~g-~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~--~~~~v~v~~~~g~~~~a 246 (516)
T 1rsg_A 185 KD-------TYF--GHQG----RNAFALN-YDSVVQRIAQSFP--QNWLKLSCEVKSITRE--PSKNVTVNCEDGTVYNA 246 (516)
T ss_dssp HH-------HCC--CCSS----CCEEESC-HHHHHHHHHTTSC--GGGEETTCCEEEEEEC--TTSCEEEEETTSCEEEE
T ss_pred HH-------HHh--hccC----cchhhhC-HHHHHHHHHHhCC--CCEEEECCEEEEEEEc--CCCeEEEEECCCcEEEC
Confidence 11 010 1111 1357777 9999888865432 3689999999999875 34446888899999999
Q ss_pred CEEEEC-CCCCCCCC---------CCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCC
Q 014049 328 HKLVLD-PSFTVPGS---------LASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (431)
Q Consensus 328 d~VI~~-p~~~~~~l---------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 376 (431)
|+||++ |...+... ...+.|+||..+....+...++.+.|.++.++++|
T Consensus 247 d~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~f 305 (516)
T 1rsg_A 247 DYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECC 305 (516)
T ss_dssp EEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCC
T ss_pred CEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCC
Confidence 999975 43332210 12456778877666656667888999999999886
No 19
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.83 E-value=1.1e-19 Score=182.99 Aligned_cols=286 Identities=11% Similarity=0.081 Sum_probs=156.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (431)
..+||+|||||++||++|..|+++|+ +|+|+|+++++||++++....
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~-------------------------------- 50 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFA-------------------------------- 50 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEET--------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccC--------------------------------
Confidence 45899999999999999999999999 899999999999999997542
Q ss_pred cccCCCCceeeecCCCeEEee-----CchHHHHHHh-cCcccccc-cccccceeeeccCCceeecCCChhhhhccCCCCh
Q 014049 100 LLSQHPRNFNLDVSGPRVLFC-----ADHAVDLMLK-SGASHYLE-FKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL 172 (431)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~-----~~~~~~~l~~-~~~~~~~~-f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~ 172 (431)
++.+|+ |++++.. ...+.+++.+ .|+..+.. +... ..+.+..+|+.++.+.. ...+.
T Consensus 51 -------~~~~d~-g~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~-~~~~~~~~g~~~~~~~~-~~~~~------ 114 (472)
T 1b37_A 51 -------GINVEL-GANWVEGVNGGKMNPIWPIVNSTLKLRNFRSDFDYL-AQNVYKEDGGVYDEDYV-QKRIE------ 114 (472)
T ss_dssp -------TEEEES-SCCEEEEESSSSCCTHHHHHHTTSCCCEEECCCTTG-GGCEECSSSSBCCHHHH-HHHHH------
T ss_pred -------CcEEee-CCeEEeccCCCCCCHHHHHHHhhcCCceeeccCccc-cceeEcCCCCCCCHHHH-HHHHH------
Confidence 345677 6887752 2357788888 78765421 2111 11223335544322110 00000
Q ss_pred HHHHHHHHHHHHHHcccCCCccccccccccccccCCcHHH--HHHhcC---CChhHHHHHHHHHhcCCCCcchhhhhhch
Q 014049 173 MEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAE--FLTKMK---LPHKIKSIVLYAIAMADYDQEVSEYVLKT 247 (431)
Q Consensus 173 ~~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--~l~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~s~ 247 (431)
....+.+|.+.+...... .++.+.++.+ ++.+.. ....+..++.....-..+..+. ..++.
T Consensus 115 -~~~~~~~~~~~~~~~~~~-----------~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~ 180 (472)
T 1b37_A 115 -LADSVEEMGEKLSATLHA-----------SGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPP--RVTSL 180 (472)
T ss_dssp -HHHHHHHHHHHHHHTSCT-----------TCTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCG--GGBBS
T ss_pred -HHHHHHHHHHHHHHhhcc-----------ccchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccc--cccch
Confidence 001122222222111100 1122344432 444322 1111222222111000001111 11222
Q ss_pred hhHHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhc--------CcEEEeCcceeEEEEecCCCcEEEEEe
Q 014049 248 RDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVK--------GCLYVLRMPVISLLTDQNSGSYKGVRL 319 (431)
Q Consensus 248 ~~~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~--------Gg~i~l~~~V~~I~~~~~~g~~~gV~~ 319 (431)
...+. ...+. .++.. .-+.+++||++.|+++|++.+... |++|+++++|++|..+ ++++ .|++
T Consensus 181 ~~~~~-~~~~~----~~~~~-~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~--~~~v-~v~~ 251 (472)
T 1b37_A 181 QNTVP-LATFS----DFGDD-VYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS--PGGV-TVKT 251 (472)
T ss_dssp TTTSS-CHHHH----HHCSE-EEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC--SSCE-EEEE
T ss_pred hhccc-ccccc----ccCCc-eeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc--CCcE-EEEE
Confidence 11100 00111 11210 113345899999999998866544 7899999999999886 5554 5888
Q ss_pred CCCcEEEeCEEEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCC
Q 014049 320 ASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (431)
Q Consensus 320 ~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 377 (431)
.+|++++||+||++ |...+..++..++|+||+.+....+...++.+.|..+.+++++-
T Consensus 252 ~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w 310 (472)
T 1b37_A 252 EDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFW 310 (472)
T ss_dssp TTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCS
T ss_pred CCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCC
Confidence 89999999999975 44333343333566677654443333346677788888888763
No 20
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.83 E-value=3.3e-19 Score=176.97 Aligned_cols=245 Identities=15% Similarity=0.167 Sum_probs=139.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G-~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (431)
..+||||||||++||+||.+|+++| ++|+|||+++++||+++|++.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~-------------------------------- 52 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYH-------------------------------- 52 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEET--------------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCC--------------------------------
Confidence 4589999999999999999999999 9999999999999999997643
Q ss_pred cccCCCCceeeecCCCeEEeeC-chHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhccCCCChHHHHHH
Q 014049 100 LLSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (431)
Q Consensus 100 ~~~~~~~~~~~dl~Gp~~~~~~-~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~l~~~~k~~l 178 (431)
++.+|. |++++... ..+.+++.+.|+... .......+.+ .+|+.. .|.. +... .+.....+
T Consensus 53 -------G~~~d~-G~~~~~~~~~~~~~l~~~~g~~~~--~~~~~~~~~~-~~g~~~-~~~~--~~~~----~~~~~~~~ 114 (424)
T 2b9w_A 53 -------GRRYEM-GAIMGVPSYDTIQEIMDRTGDKVD--GPKLRREFLH-EDGEIY-VPEK--DPVR----GPQVMAAV 114 (424)
T ss_dssp -------TEECCS-SCCCBCTTCHHHHHHHHHHCCCCC--SCCCCEEEEC-TTSCEE-CGGG--CTTH----HHHHHHHH
T ss_pred -------Cccccc-CceeecCCcHHHHHHHHHhCCccc--cccccceeEc-CCCCEe-cccc--Cccc----chhHHHHH
Confidence 244566 57665433 356777887776421 1111122222 355543 2211 0000 00011122
Q ss_pred HHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcCCCCcchhhhhhchhhHHHHHHHHH
Q 014049 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (431)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 258 (431)
.++...+......... ........+....|+.+|+++.+.+. +.+.+...+....+. ++ .++++...+ .|+
T Consensus 115 ~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~a~~~~----~~~ 185 (424)
T 2b9w_A 115 QKLGQLLATKYQGYDA-NGHYNKVHEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYG-HF--DNVPAAYVL----KYL 185 (424)
T ss_dssp HHHHHHHHTTTTTTTS-SSSSSCCCGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCC-CT--TTSBHHHHH----HHS
T ss_pred HHHHHHHhhhhhhccc-ccchhhhhhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccC-Ch--HhcCHHHHH----Hhh
Confidence 2333322221111000 00000112345689999999887764 444332111111121 11 223443322 222
Q ss_pred hhhc--cccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 259 SSIG--RFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 259 ~s~~--~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
...+ .+.. +..+++.+|+++++++|.+ ..+.+|+++++|++|..+ ++++ .|++.+|+ ++||+||++
T Consensus 186 ~~~~~~~~~~--~~~~~~~~g~~~l~~~l~~---~l~~~v~~~~~V~~i~~~--~~~v-~v~~~~g~-~~ad~Vv~a 253 (424)
T 2b9w_A 186 DFVTMMSFAK--GDLWTWADGTQAMFEHLNA---TLEHPAERNVDITRITRE--DGKV-HIHTTDWD-RESDVLVLT 253 (424)
T ss_dssp CHHHHHHHHH--TCCBCCTTCHHHHHHHHHH---HSSSCCBCSCCEEEEECC--TTCE-EEEESSCE-EEESEEEEC
T ss_pred hHhhhhcccC--CceEEeCChHHHHHHHHHH---hhcceEEcCCEEEEEEEE--CCEE-EEEECCCe-EEcCEEEEC
Confidence 1100 0100 1245789999999998864 456789999999999876 5554 58877775 999999975
No 21
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.82 E-value=4.7e-19 Score=176.20 Aligned_cols=289 Identities=15% Similarity=0.105 Sum_probs=161.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccccccc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (431)
+||||||||++||+||..|+++|++|+|||+++++||++.+.+..-
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~c---------------------------------- 47 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRN---------------------------------- 47 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSS----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccC----------------------------------
Confidence 7999999999999999999999999999999999999999865320
Q ss_pred CCCCceeeecCCCeEEee--CchHHHHHHhcCcccccccccccceeee-ccCCceeec-CCChhhhhccCCCChHHHHHH
Q 014049 103 QHPRNFNLDVSGPRVLFC--ADHAVDLMLKSGASHYLEFKSIDATFML-DADAKLCSV-PDSRAAIFKDKSLGLMEKNQL 178 (431)
Q Consensus 103 ~~~~~~~~dl~Gp~~~~~--~~~~~~~l~~~~~~~~~~f~~~~~~~~~-~~~g~~~~~-p~~~~~~~~~~~l~~~~k~~l 178 (431)
..++.+++ |++++.. ...+.+.+.+.|+........ ....+ ..+++.... |... ... ..-+..+
T Consensus 48 --ipg~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~ 115 (431)
T 3k7m_X 48 --VPGLRVEI-GGAYLHRKHHPRLAAELDRYGIPTAAASEF--TSFRHRLGPTAVDQAFPIPG-SEA------VAVEAAT 115 (431)
T ss_dssp --STTCEEES-SCCCBCTTTCHHHHHHHHHHTCCEEECCCC--CEECCBSCTTCCSSSSCCCG-GGH------HHHHHHH
T ss_pred --CCCceEec-CCeeeCCCCcHHHHHHHHHhCCeeeecCCC--CcEEEEecCCeecCCCCCCH-HHH------HHHHHHH
Confidence 01334566 4665533 335666777777643221111 11111 112221111 1110 000 0012223
Q ss_pred HHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcCCCCcchhhhhhchhhHHHHHHHHH
Q 014049 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (431)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 258 (431)
.+++..........+... ....+. +.++.+|+++.+.++..+.++...+... +..+. .+++....+..+...-
T Consensus 116 ~~l~~~~~~~~~~~~~~~---~~~~~~-d~s~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s~~~~~~~~~~~~ 188 (431)
T 3k7m_X 116 YTLLRDAHRIDLEKGLEN---QDLEDL-DIPLNEYVDKLDLPPVSRQFLLAWAWNM-LGQPA--DQASALWMLQLVAAHH 188 (431)
T ss_dssp HHHHHHHTTCCTTTCTTS---SSCGGG-CSBHHHHHHHHTCCHHHHHHHHHHHHHH-HSSCT--TTSBHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCccC---cchhhh-cCCHHHHHHhcCCCHHHHHHHHHHHHHh-cCCCh--hhhhHHHHHHHHHhcC
Confidence 334443333211111000 011223 3899999999888877666543211100 11111 1234433322221110
Q ss_pred hhhc--cccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC-CC
Q 014049 259 SSIG--RFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PS 335 (431)
Q Consensus 259 ~s~~--~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~-p~ 335 (431)
..+. ... ... ++.+|++.+++++. +..| +|+++++|++|..+ ++. +.|++.+|++++||+||++ |.
T Consensus 189 ~~~~~~~~~---~~~-~~~~g~~~l~~~~~---~~~g-~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad~vi~a~~~ 257 (431)
T 3k7m_X 189 YSILGVVLS---LDE-VFSNGSADLVDAMS---QEIP-EIRLQTVVTGIDQS--GDV-VNVTVKDGHAFQAHSVIVATPM 257 (431)
T ss_dssp SCHHHHHHT---CCE-EETTCTHHHHHHHH---TTCS-CEESSCCEEEEECS--SSS-EEEEETTSCCEEEEEEEECSCG
T ss_pred Cccceeecc---hhh-hcCCcHHHHHHHHH---hhCC-ceEeCCEEEEEEEc--CCe-EEEEECCCCEEEeCEEEEecCc
Confidence 0000 011 113 78999999988765 4567 99999999999875 444 4588888988999999965 44
Q ss_pred CCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCC
Q 014049 336 FTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (431)
Q Consensus 336 ~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 377 (431)
..+..+ .+.|+||..+....+...++...+..+.++++++
T Consensus 258 ~~l~~i--~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~ 297 (431)
T 3k7m_X 258 NTWRRI--VFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA 297 (431)
T ss_dssp GGGGGS--EEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT
T ss_pred chHhhe--eeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc
Confidence 443442 2456666544433333456667888877888874
No 22
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.81 E-value=2e-19 Score=182.32 Aligned_cols=283 Identities=12% Similarity=0.085 Sum_probs=159.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (431)
..+||+|||||++||+||..|+++|++|+|||+++++||++.++...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~--------------------------------- 78 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNE--------------------------------- 78 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEET---------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccC---------------------------------
Confidence 45799999999999999999999999999999999999999886521
Q ss_pred ccCCCCceeeecCCCeEEeeCc-hHHHHHHhcCccccccccccc-ceeeeccCCceeecC---CChhhhhccCCCChHHH
Q 014049 101 LSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSID-ATFMLDADAKLCSVP---DSRAAIFKDKSLGLMEK 175 (431)
Q Consensus 101 ~~~~~~~~~~dl~Gp~~~~~~~-~~~~~l~~~~~~~~~~f~~~~-~~~~~~~~g~~~~~p---~~~~~~~~~~~l~~~~k 175 (431)
..++.+|+ |++++.... .+.+++.+.|+... .+...+ ..+.+. +|.....+ ... ..+.. .+.+.++
T Consensus 79 ----~~~~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~~-~~~~~~~ 149 (498)
T 2iid_A 79 ----EAGWYANL-GPMRLPEKHRIVREYIRKFDLRLN-EFSQENDNAWYFI-KNIRKKVGEVKKDP-GLLKY-PVKPSEA 149 (498)
T ss_dssp ----TTTEEEES-SCCCEETTCHHHHHHHHHTTCCEE-EECSCCTTSEEEE-TTEEEEHHHHHHCG-GGGCC-CCCGGGT
T ss_pred ----CCCchhhc-CcccccchHHHHHHHHHHhCCCce-eecccCCccEEEe-CCeeecccccccCc-ccccc-CCCcccc
Confidence 12345566 576654433 45666777776421 221111 112111 33322111 000 01110 1111110
Q ss_pred ---------HHHHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcC-CChhHHHHHHHHHhcC-CCCcchhhhh
Q 014049 176 ---------NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK-LPHKIKSIVLYAIAMA-DYDQEVSEYV 244 (431)
Q Consensus 176 ---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~-~~~~l~~~~~~~~~~~-~~~~~~~~~~ 244 (431)
..+.+++..+.... .......+...++.+|+++.+ +++..+..+...+... .+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------- 214 (498)
T 2iid_A 150 GKSAGQLYEESLGKVVEELKRTN--------CSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNEDSGYY------- 214 (498)
T ss_dssp TCCHHHHHHHHTHHHHHHHHHSC--------HHHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCGGGTT-------
T ss_pred CCCHHHHHHHHHHHHHHHHhhcc--------HHHHHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCcccchh-------
Confidence 01112222111110 000112345578999999866 5555544433221100 000
Q ss_pred hchhhHHHHHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCc-
Q 014049 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ- 323 (431)
Q Consensus 245 ~s~~~~~~~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~- 323 (431)
.+....+.... ... .+ ..++++.||+++|+++|++.+. .+|+++++|++|..+ +++ +.|++.+|+
T Consensus 215 ~~~~~~~~~~~----~~~-~~---~~~~~~~gG~~~l~~~l~~~l~---~~i~~~~~V~~I~~~--~~~-v~v~~~~~~~ 280 (498)
T 2iid_A 215 VSFIESLKHDD----IFA-YE---KRFDEIVDGMDKLPTAMYRDIQ---DKVHFNAQVIKIQQN--DQK-VTVVYETLSK 280 (498)
T ss_dssp SBHHHHHHHHH----HHT-TC---CCEEEETTCTTHHHHHHHHHTG---GGEESSCEEEEEEEC--SSC-EEEEEECSSS
T ss_pred HHHHHHHHHHh----ccc-cC---cceEEeCCcHHHHHHHHHHhcc---cccccCCEEEEEEEC--CCe-EEEEEecCCc
Confidence 01111111111 111 11 1267899999999999987543 489999999999986 444 467766665
Q ss_pred ---EEEeCEEEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCC
Q 014049 324 ---DILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (431)
Q Consensus 324 ---~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 376 (431)
+++||+||++ |...+..+ .++|+||..+....+...++.+.|..+.+++++
T Consensus 281 ~~~~~~ad~vI~t~p~~~~~~i--~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~ 335 (498)
T 2iid_A 281 ETPSVTADYVIVCTTSRAVRLI--KFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKF 335 (498)
T ss_dssp CCCEEEESEEEECSCHHHHTTS--EEESCCCHHHHHHHHHCCEECEEEEEEEESSCG
T ss_pred ccceEEeCEEEECCChHHHhhe--ecCCCCCHHHHHHHHhCCCcceeEEEEEeCCCC
Confidence 5899999975 44433443 245667766554434455777888888898875
No 23
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.80 E-value=8.2e-19 Score=177.41 Aligned_cols=302 Identities=14% Similarity=0.109 Sum_probs=153.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (431)
..+||+|||||++||+||..|+++|++|+|||+++++||++++..... .+....+. ..
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~--~~~~~~~~--------------------~~ 67 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGS--EETDLSGE--------------------TQ 67 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTC--EEECTTSC--------------------EE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCc--ccccccch--------------------hh
Confidence 467999999999999999999999999999999999999999876431 01100000 00
Q ss_pred ccCCCCceeeecCCCeEEeeCchHHHHHHhcCccccccccccc-ceeee-ccC----CceeecCCChhhhhccCCCChHH
Q 014049 101 LSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSID-ATFML-DAD----AKLCSVPDSRAAIFKDKSLGLME 174 (431)
Q Consensus 101 ~~~~~~~~~~dl~Gp~~~~~~~~~~~~l~~~~~~~~~~f~~~~-~~~~~-~~~----g~~~~~p~~~~~~~~~~~l~~~~ 174 (431)
......++.+|. |+..+.....+.+++.+.|+... .+.... ..+++ ..+ |+...++....+.
T Consensus 68 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---------- 135 (489)
T 2jae_A 68 KCTFSEGHFYNV-GATRIPQSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAAKADT---------- 135 (489)
T ss_dssp ECCCCTTCEEES-SCCCEETTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHHHHHH----------
T ss_pred hhcccCCCcCCc-chhhcccHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHHhhhh----------
Confidence 001123455677 57766554578888888887421 121111 12333 211 4333322110000
Q ss_pred HHHHHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChh--------HHHHHHHHHhcCCCCcchhhhhhc
Q 014049 175 KNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHK--------IKSIVLYAIAMADYDQEVSEYVLK 246 (431)
Q Consensus 175 k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~--------l~~~~~~~~~~~~~~~~~~~~~~s 246 (431)
...+..++.......... +...+..+.++.+|+++++.... +..++...-........... ..
T Consensus 136 ~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 206 (489)
T 2jae_A 136 FGYMSELLKKATDQGALD-------QVLSREDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKP--FA 206 (489)
T ss_dssp HHHHHHHHHHHHHHTTTT-------TTSCHHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCC--CC
T ss_pred hccHHHHHHHHHhccccc-------cccchhhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCC--cC
Confidence 000111111111100000 00001122467777765321100 00000000000000000000 00
Q ss_pred hhhHHH-HHHHHHhhhccccCCCccEEeecCCcchHHHHHHHHHHhcC-cEEEeCcceeEEEEecCCCcEEEEEeCCC--
Q 014049 247 TRDGIN-RLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASG-- 322 (431)
Q Consensus 247 ~~~~~~-~~~~~~~s~~~~g~~~~~~~~p~gG~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~~~~G-- 322 (431)
...... .+..++........ ...+++++||++.|+++|++.+ + ++|+++++|++|..+ ++++ .|++.+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l---~~~~i~~~~~V~~i~~~--~~~v-~v~~~~g~~ 279 (489)
T 2jae_A 207 MQEVIRSGIGRNFSFDFGYDQ-AMMMFTPVGGMDRIYYAFQDRI---GTDNIVFGAEVTSMKNV--SEGV-TVEYTAGGS 279 (489)
T ss_dssp HHHHHHHTTTTTGGGGGCTTT-SSSEEEETTCTTHHHHHHHHHH---CGGGEETTCEEEEEEEE--TTEE-EEEEEETTE
T ss_pred HHHHhhhhHHHHHhhhhcccc-CccEEeecCCHHHHHHHHHHhc---CCCeEEECCEEEEEEEc--CCeE-EEEEecCCe
Confidence 000000 01111111101111 1237789999999999998754 4 789999999999987 5554 4776676
Q ss_pred -cEEEeCEEEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCC
Q 014049 323 -QDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (431)
Q Consensus 323 -~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 376 (431)
++++||+||++ |...+..+.. ++|..+....+...+..+.+..+.+++++
T Consensus 280 ~~~~~ad~vI~a~p~~~l~~l~~----~l~~~~~~~l~~~~~~~~~kv~l~~~~~~ 331 (489)
T 2jae_A 280 KKSITADYAICTIPPHLVGRLQN----NLPGDVLTALKAAKPSSSGKLGIEYSRRW 331 (489)
T ss_dssp EEEEEESEEEECSCHHHHTTSEE----CCCHHHHHHHHTEECCCEEEEEEEESSCH
T ss_pred EEEEECCEEEECCCHHHHHhCcc----CCCHHHHHHHHhCCCccceEEEEEeCCCC
Confidence 67999999975 4444455432 34433333223344677888888888874
No 24
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.72 E-value=1.9e-16 Score=153.23 Aligned_cols=47 Identities=17% Similarity=0.340 Sum_probs=43.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccC-CCCCCcccccCh
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN-PFYGSHFSSLSI 66 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~-~~~GG~~~t~~~ 66 (431)
...+||+|||||++||+||+.|+++|++|+|||++ +++||++.++..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~ 89 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHA 89 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecc
Confidence 35689999999999999999999999999999999 999999998763
No 25
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.70 E-value=4.6e-18 Score=167.27 Aligned_cols=298 Identities=12% Similarity=0.093 Sum_probs=157.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCccccccccccccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~-G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (431)
.++||+|||||++||+||.+|+++ |++|+|||+++++||++++.....
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~------------------------------- 54 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQ------------------------------- 54 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTT-------------------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccC-------------------------------
Confidence 468999999999999999999999 999999999999999999975410
Q ss_pred cccCCCCceeee-cCCCeEEeeC-chHHHHHHhcCcccccccccccceeeeccCCceeecCCChh---hhhccCCCChHH
Q 014049 100 LLSQHPRNFNLD-VSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRA---AIFKDKSLGLME 174 (431)
Q Consensus 100 ~~~~~~~~~~~d-l~Gp~~~~~~-~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~---~~~~~~~l~~~~ 174 (431)
.++.+| . |++++... ..+.+++.+.++. ..+.. ..+++ .+|+.+++|.+.. .++.. .+++.+
T Consensus 55 ------~g~~~~~~-G~~~~~~~~~~~~~~~~~~g~~--~~~~~--~~~~~-~~G~~~~~p~~~~~~~~l~~~-~~~~~~ 121 (399)
T 1v0j_A 55 ------TGIEVHKY-GAHLFHTSNKRVWDYVRQFTDF--TDYRH--RVFAM-HNGQAYQFPMGLGLVSQFFGK-YFTPEQ 121 (399)
T ss_dssp ------TCCEEETT-SCCCEEESCHHHHHHHTTTCCB--CCCCC--CEEEE-ETTEEEEESSSHHHHHHHHTS-CCCHHH
T ss_pred ------CCEEEEeC-CCcEEcCCcHHHHHHHHHhhhh--hcccc--ceEEE-ECCEEEeCCCCHHHHHHHhcc-cCCHHH
Confidence 134454 4 67766543 3677777777752 12211 12233 3788888887642 22221 123322
Q ss_pred HHHHHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHH-HHHH-HHHhcCCCCcchhhhhhchhhHHH
Q 014049 175 KNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIK-SIVL-YAIAMADYDQEVSEYVLKTRDGIN 252 (431)
Q Consensus 175 k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~-~~~~-~~~~~~~~~~~~~~~~~s~~~~~~ 252 (431)
. .+++....... ......++.+|+.+. ..+.+. .++. +....+ ..++ .++++... .
T Consensus 122 ~---~~~l~~~~~~~-------------~~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~--~~~~--~~ls~~~~-~ 179 (399)
T 1v0j_A 122 A---RQLIAEQAAEI-------------DTADAQNLEEKAISL-IGRPLYEAFVKGYTAKQW--QTDP--KELPAANI-T 179 (399)
T ss_dssp H---HHHHHHHGGGS-------------CTTC----CCHHHHH-HCHHHHHHHTHHHHHHHH--TSCG--GGSCGGGC-S
T ss_pred H---HHHHHHHhhcc-------------CCCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhc--CCCh--hhcChHhh-h
Confidence 2 22222211110 012345777777752 233232 3222 111121 1222 23444321 0
Q ss_pred HHHHHHhhhccccCCCccEE-eecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEE-EeCEE
Q 014049 253 RLALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI-LSHKL 330 (431)
Q Consensus 253 ~~~~~~~s~~~~g~~~~~~~-~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i-~Ad~V 330 (431)
++.........+.. ..+. +|+||+++|+++|++ .+|++|++|++|++|.. . | . ++ .||+|
T Consensus 180 ~~~~~~~~~~~~~~--~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~I~~---~-----v--~---~~~~aD~V 241 (399)
T 1v0j_A 180 RLPVRYTFDNRYFS--DTYEGLPTDGYTAWLQNMAA---DHRIEVRLNTDWFDVRG---Q-----L--R---PGSPAAPV 241 (399)
T ss_dssp CCCCCSSSCCCSCC--CSEEECBTTHHHHHHHHHTC---STTEEEECSCCHHHHHH---H-----H--T---TTSTTCCE
T ss_pred cceeEeccccchhh--hhhcccccccHHHHHHHHHh---cCCeEEEECCchhhhhh---h-----h--h---hcccCCEE
Confidence 00000000011111 1243 999999999998875 57899999999999842 1 2 1 35 69999
Q ss_pred EEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCCCCCCceEEEeCCCCCCCCCCCeEEEEEecC-C
Q 014049 331 VLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLGG-N 408 (431)
Q Consensus 331 I~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~-~ 408 (431)
|++ |...+.++. + ....+.++....+.++.+.. .....+.+|....+ .. .+..++. .
T Consensus 242 I~t~p~~~l~~~~-------------l-~~l~y~s~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~--ri~~~~~~~ 300 (399)
T 1v0j_A 242 VYTGPLDRYFDYA-------------E-GRLGWRTLDFEVEVLPIGDF--QGTAVMNYNDLDVP---YT--RIHEFRHFH 300 (399)
T ss_dssp EECSCHHHHTTTT-------------T-CCCCEEEEEEEEEEESSSCS--SSSSEEEECCTTSS---CS--EEEEGGGGC
T ss_pred EECCcHHHHHhhh-------------h-CCCCcceEEEEEEEEccccC--CCCeEEEeCCCCCC---cc--eeEeecCCC
Confidence 975 332222221 0 11123333344444566532 12345666643222 12 2344443 4
Q ss_pred CccC-CCCcEEEEEEc
Q 014049 409 LAVC-PLGMVSLDLLS 423 (431)
Q Consensus 409 ~~~a-P~G~~~~~i~~ 423 (431)
+..+ |+++.++.+-.
T Consensus 301 ~~~~~~~~~~~v~~e~ 316 (399)
T 1v0j_A 301 PERDYPTDKTVIMREY 316 (399)
T ss_dssp TTSCCCSSCEEEEEEE
T ss_pred CCCcCCCCCeEEEEee
Confidence 5666 77777776653
No 26
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.68 E-value=2.5e-17 Score=160.20 Aligned_cols=224 Identities=13% Similarity=0.171 Sum_probs=128.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCccccccccccccccc
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (431)
++||+|||||++||+||.+|+++|++|+|+|+++++||++.++..+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~---------------------------------- 46 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCE---------------------------------- 46 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEET----------------------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccC----------------------------------
Confidence 3799999999999999999999999999999999999999997532
Q ss_pred cCCCCceeee-cCCCeEEeeCc-hHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhhhcc-CCCChHHHHHH
Q 014049 102 SQHPRNFNLD-VSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKD-KSLGLMEKNQL 178 (431)
Q Consensus 102 ~~~~~~~~~d-l~Gp~~~~~~~-~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~~~~-~~l~~~~k~~l 178 (431)
++.+| . |++++.... .+.+++.+.+. ...+... .+.+ .+|+.+++|.+...+... ....+ ..+
T Consensus 47 -----g~~~~~~-G~~~~~~~~~~~~~~~~~l~~--~~~~~~~--~~~~-~~g~~~~~p~~~~~~~~l~~~~~~---~~~ 112 (367)
T 1i8t_A 47 -----GIQIHKY-GAHIFHTNDKYIWDYVNDLVE--FNRFTNS--PLAI-YKDKLFNLPFNMNTFHQMWGVKDP---QEA 112 (367)
T ss_dssp -----TEEEETT-SCCCEEESCHHHHHHHHTTSC--BCCCCCC--CEEE-ETTEEEESSBSHHHHHHHHCCCCH---HHH
T ss_pred -----Cceeecc-CCceecCCCHHHHHHHHHhhh--hhhcccc--ceEE-ECCeEEEcCCCHHHHHHHhccCCH---HHH
Confidence 24454 4 677765543 55666665553 1122211 1222 378888888764322110 11122 223
Q ss_pred HHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHH--HHHhcCCCCcchhhhhhchhhHHHHHHH
Q 014049 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGINRLAL 256 (431)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 256 (431)
.+++....... ....+.++.+|+.+. ..+.+.+.+. +....+ ..++ .++|+... .++..
T Consensus 113 ~~~l~~~~~~~-------------~~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~--~~~~--~~lsa~~~-~~l~~ 173 (367)
T 1i8t_A 113 QNIINAQKKKY-------------GDKVPENLEEQAISL-VGEDLYQALIKGYTEKQW--GRSA--KELPAFII-KRIPV 173 (367)
T ss_dssp HHHHHHHTTTT-------------CCCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHH--SSCG--GGSCTTSS-CCCCB
T ss_pred HHHHHHHhhcc-------------CCCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhh--CCCh--HHcCHHHH-hhcee
Confidence 34444332211 112457899998764 3333333221 111221 2222 23444321 00000
Q ss_pred HHhhhccccCCCccEE-eecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 257 YNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 257 ~~~s~~~~g~~~~~~~-~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
....-..+. .+.+. +|+||+++|+++|++ |++|++|++|++|. . + | ++.||+||++
T Consensus 174 ~~~~~~~~~--~~~~~~~p~gG~~~l~~~l~~-----g~~i~l~~~V~~i~----~-~---v------~~~~D~VV~a 230 (367)
T 1i8t_A 174 RFTFDNNYF--SDRYQGIPVGGYTKLIEKMLE-----GVDVKLGIDFLKDK----D-S---L------ASKAHRIIYT 230 (367)
T ss_dssp CSSSCCCSC--CCSEEECBTTCHHHHHHHHHT-----TSEEECSCCGGGSH----H-H---H------HTTEEEEEEC
T ss_pred eeccccccc--cchhhcccCCCHHHHHHHHhc-----CCEEEeCCceeeec----h-h---h------hccCCEEEEe
Confidence 000000111 12343 999999999998875 68999999999884 1 1 2 1458999975
No 27
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.67 E-value=1.3e-15 Score=160.73 Aligned_cols=98 Identities=13% Similarity=0.062 Sum_probs=72.0
Q ss_pred EEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC-CCCCCCCCCCCchhhh
Q 014049 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQL 349 (431)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l 349 (431)
...+.+|++.+.++|++ |.+|+++++|++|..+ +++ +.|++.+|++++||+||++ |...+......++|+|
T Consensus 526 ~~~~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~--~~~-v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~L 597 (776)
T 4gut_A 526 HTLLTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYS--GDE-VQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPL 597 (776)
T ss_dssp EEECTTCTHHHHHHHHT-----TSCEESSCCEEEEECS--SSS-EEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCC
T ss_pred eEEECChHHHHHHHHHh-----CCcEEcCCeeEEEEEc--CCE-EEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCC
Confidence 56788999999988764 6789999999999876 444 4688889999999999965 5443332222456777
Q ss_pred hhhhhhhcccCCCCeEEEEEEEeCCCC
Q 014049 350 QESFQAFSLSDNKGKVARGICITRSSL 376 (431)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~i~~~~~ 376 (431)
|..+....+...++.+.|.++.++++|
T Consensus 598 p~~~~~ai~~l~~g~~~KV~l~f~~~F 624 (776)
T 4gut_A 598 SEKKMKAINSLGAGIIEKIALQFPYRF 624 (776)
T ss_dssp CHHHHHHHHHEEEECCEEEEEECSSCT
T ss_pred CHHHHHHHHhCCCeeEEEEEEecCccc
Confidence 775554444445677888898899886
No 28
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.66 E-value=2.6e-16 Score=153.48 Aligned_cols=225 Identities=14% Similarity=0.221 Sum_probs=130.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccC-hhhhhhhhhcCCCCCCCCCCCccccccccccc
Q 014049 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (431)
Q Consensus 19 ~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (431)
....+||+|||||++||+||..|+++|++|+|+|+++++||++.+.. .+
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~------------------------------ 75 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDA------------------------------ 75 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTT------------------------------
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccC------------------------------
Confidence 34579999999999999999999999999999999999999999864 22
Q ss_pred cccccCCCCceee-ecCCCeEEeeC-chHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhh--hccCCCChH
Q 014049 98 SRLLSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAI--FKDKSLGLM 173 (431)
Q Consensus 98 ~~~~~~~~~~~~~-dl~Gp~~~~~~-~~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~--~~~~~l~~~ 173 (431)
++.+ |. |++++... ..+.+++.+.+.. ..+ ....+.+. +|+++++|.+...+ +....+++.
T Consensus 76 ---------G~~~~~~-G~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~-~g~l~~lP~~~~~~~~l~~~~~~~~ 140 (397)
T 3hdq_A 76 ---------GVLIHPY-GPHIFHTNSKDVFEYLSRFTEW--RPY--QHRVLASV-DGQLLPIPINLDTVNRLYGLNLTSF 140 (397)
T ss_dssp ---------SCEECTT-SCCCCEESCHHHHHHHHTSCCE--EEC--CCBEEEEE-TTEEEEESCCHHHHHHHHTCCCCHH
T ss_pred ---------CceEeec-CCcccCCChHHHHHHHHHhhhc--ccc--cccceEEE-CCEEEEcCCChHHHHHhhccCCCHH
Confidence 2222 44 57766544 3567777776631 111 11223333 78999999875322 112223333
Q ss_pred HHHHHHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHH-HHH-HHHhcCCCCcchhhhhhchhhHH
Q 014049 174 EKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGI 251 (431)
Q Consensus 174 ~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~~~-~~~~~~~~~~~~~~~~~s~~~~~ 251 (431)
.. ..++.. .. .....+.++.+|+.+.- .+.+.+ ++. +.... |..++ +++|+.. +
T Consensus 141 ~~---~~~l~~-~~--------------~~~~~~~s~~e~~~~~~-G~~~~e~~~~py~~k~--~~~~~--~~Lsa~~-~ 196 (397)
T 3hdq_A 141 QV---EEFFAS-VA--------------EKVEQVRTSEDVVVSKV-GRDLYNKFFRGYTRKQ--WGLDP--SELDASV-T 196 (397)
T ss_dssp HH---HHHHHH-HC--------------CCCSSCCBHHHHHHHHH-HHHHHHHHTHHHHHHH--HSSCG--GGSBTTT-G
T ss_pred HH---HHHHhh-cc--------------cCCCCCcCHHHHHHHhc-CHHHHHHHHHHHhCch--hCCCH--HHHHHHH-H
Confidence 22 233321 11 01234678999987521 122322 222 11122 22222 3455432 1
Q ss_pred HHHHHHHhhhccccCCCccE-EeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEE
Q 014049 252 NRLALYNSSIGRFQNALGAL-IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKL 330 (431)
Q Consensus 252 ~~~~~~~~s~~~~g~~~~~~-~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~V 330 (431)
.++......-..+.. ..+ .+|+||.++|.++|+ +..|++|+||++|.++ ++++.||+|
T Consensus 197 ~Rvp~~~~~d~~yf~--~~~qg~P~gGy~~l~e~l~---~~~g~~V~l~~~v~~~----------------~~~~~~d~v 255 (397)
T 3hdq_A 197 ARVPTRTNRDNRYFA--DTYQAMPLHGYTRMFQNML---SSPNIKVMLNTDYREI----------------ADFIPFQHM 255 (397)
T ss_dssp GGSCCCSSCCCBSCC--CSEEEEETTCHHHHHHHHT---CSTTEEEEESCCGGGT----------------TTTSCEEEE
T ss_pred HhcCcccccCccchh--hhheeccCCCHHHHHHHHH---hccCCEEEECCeEEec----------------cccccCCEE
Confidence 111000000001111 124 379999999998774 4679999999999732 223568999
Q ss_pred EEC
Q 014049 331 VLD 333 (431)
Q Consensus 331 I~~ 333 (431)
|++
T Consensus 256 I~T 258 (397)
T 3hdq_A 256 IYT 258 (397)
T ss_dssp EEC
T ss_pred EEc
Confidence 965
No 29
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.66 E-value=1e-16 Score=156.80 Aligned_cols=213 Identities=14% Similarity=0.186 Sum_probs=123.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChhhhhhhhhcCCCCCCCCCCCcccccccccccccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (431)
+++||+|||||++||++|..|+++|++|+|+|+++++||++++.....
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~-------------------------------- 49 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSE-------------------------------- 49 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTT--------------------------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccC--------------------------------
Confidence 357999999999999999999999999999999999999999875421
Q ss_pred ccCCCCceee-ecCCCeEEeeCc-hHHHHHHhcCcccccccccccceeeeccCCceeecCCChhhh---hccCCCChHHH
Q 014049 101 LSQHPRNFNL-DVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAI---FKDKSLGLMEK 175 (431)
Q Consensus 101 ~~~~~~~~~~-dl~Gp~~~~~~~-~~~~~l~~~~~~~~~~f~~~~~~~~~~~~g~~~~~p~~~~~~---~~~~~l~~~~k 175 (431)
.++.+ |. |++++...+ .+.+++.+.+.. ..+. ...+.+ .+|+.+++|.+...+ +.. .+++.+
T Consensus 50 -----~g~~~~~~-G~~~~~~~~~~~~~~~~~l~~~--~~~~--~~~~~~-~~g~~~~~P~~~~~~~~l~~~-~~~~~~- 116 (384)
T 2bi7_A 50 -----TNVMVHVY-GPHIFHTDNETVWNYVNKHAEM--MPYV--NRVKAT-VNGQVFSLPINLHTINQFFSK-TCSPDE- 116 (384)
T ss_dssp -----TCCEEETT-SCCCEEESCHHHHHHHHTTSCE--EECC--CCEEEE-ETTEEEEESCCHHHHHHHTTC-CCCHHH-
T ss_pred -----CCceEeeC-CceEECCCCHHHHHHHHHHhhh--cccc--cceEEE-ECCEEEECCCChhHHHHHhcc-cCCHHH-
Confidence 12333 45 687765443 677777776641 1111 112222 378888888765322 211 123322
Q ss_pred HHHHHHHHHHHcccCCCccccccccccccccCCcHHHHHHhcCCChhHHHHHH--HHHhcCCCCcchhhhhhchhhHHHH
Q 014049 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGINR 253 (431)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~s~~~~~~~ 253 (431)
+.+++...... . ...+.++.+|+.+. ..+.+.+.+. +..+. +..++ .+++.... .+
T Consensus 117 --~~~~l~~~~~~-------------~-~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~--~~~~~--~~ls~~~~-~r 174 (384)
T 2bi7_A 117 --ARALIAEKGDS-------------T-IADPQTFEEEALRF-IGKELYEAFFKGYTIKQ--WGMQP--SELPASIL-KR 174 (384)
T ss_dssp --HHHHHHHHSCC-------------S-CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHH--HSSCG--GGSBGGGC-CS
T ss_pred --HHHHHHHhhhc-------------c-CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHH--hCCCH--HHhCHHHH-hc
Confidence 22333322110 0 12467899999865 3344443222 11122 22222 23443321 00
Q ss_pred HHHHHhhhccccCCCccEE-eecCCcchHHHHHHHHHHhcCcEEEeCccee-EE
Q 014049 254 LALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVI-SL 305 (431)
Q Consensus 254 ~~~~~~s~~~~g~~~~~~~-~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~-~I 305 (431)
+.........+.. +.+. +|+||+++|+++|++ ..|++|+++++|+ +|
T Consensus 175 ~~~~~~~~~~~~~--~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~~i 223 (384)
T 2bi7_A 175 LPVRFNYDDNYFN--HKFQGMPKCGYTQMIKSILN---HENIKVDLQREFIVEE 223 (384)
T ss_dssp CCCCSSSCCCSCC--CSEEEEETTHHHHHHHHHHC---STTEEEEESCCCCGGG
T ss_pred ccccccccccccc--ccccEEECcCHHHHHHHHHh---cCCCEEEECCeeehhh
Confidence 0000000011111 2243 999999999998865 5789999999999 77
No 30
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.62 E-value=6.5e-15 Score=156.35 Aligned_cols=99 Identities=11% Similarity=-0.017 Sum_probs=72.0
Q ss_pred cEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCC------CcEEEeCEEEEC-CCCCCCCCC
Q 014049 270 ALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGSL 342 (431)
Q Consensus 270 ~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~------G~~i~Ad~VI~~-p~~~~~~l~ 342 (431)
.++.++||++.|+++|++ +..|+||++|++|..+ ++. +.|++.+ |++++||+||++ |...+..+.
T Consensus 563 ~~~~~~gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~--~~g-V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~ 634 (852)
T 2xag_A 563 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 634 (852)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCCEECSEEEEEEEEE--TTE-EEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred ceEEecCcHHHHHHHHHh-----CCCEEeCCeEEEEEEc--CCc-EEEEEeecccCCCCeEEECCEEEECCCHHHHHhhh
Confidence 367899999999998875 3479999999999987 444 4566554 578999999986 544433321
Q ss_pred --CCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCC
Q 014049 343 --ASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (431)
Q Consensus 343 --~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 376 (431)
+.+.|+||..+....+...++.+.|.++.++++|
T Consensus 635 ~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~f 670 (852)
T 2xag_A 635 PAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVF 670 (852)
T ss_dssp CSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCC
T ss_pred cccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcc
Confidence 2356778775554444455788899999899886
No 31
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.62 E-value=9e-15 Score=152.80 Aligned_cols=100 Identities=11% Similarity=-0.029 Sum_probs=73.0
Q ss_pred cEEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCC------CcEEEeCEEEEC-CCCCCCCCC
Q 014049 270 ALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGSL 342 (431)
Q Consensus 270 ~~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~------G~~i~Ad~VI~~-p~~~~~~l~ 342 (431)
.++.++||++.|+++|++ +..|++|++|++|..+ ++. +.|++.+ |++++||+||++ |...+.++.
T Consensus 392 ~~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~--~~~-v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~ 463 (662)
T 2z3y_A 392 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 463 (662)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEE--TTE-EEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred ceeeecCcHHHHHHHHHh-----cCceecCCeEEEEEEC--CCc-EEEEEeecccCCCCeEEEeCEEEECCCHHHHhccc
Confidence 356889999999998865 4589999999999987 444 4566555 578999999976 544433321
Q ss_pred --CCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCCC
Q 014049 343 --ASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (431)
Q Consensus 343 --~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 377 (431)
..+.|+||..+....+...++.+.|.++.++++|-
T Consensus 464 ~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW 500 (662)
T 2z3y_A 464 PAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFW 500 (662)
T ss_dssp CSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCS
T ss_pred CceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccc
Confidence 23577788765544444567888999999998863
No 32
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.61 E-value=3.3e-14 Score=136.73 Aligned_cols=100 Identities=10% Similarity=-0.011 Sum_probs=72.5
Q ss_pred EEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC-CCCCCCCCCCCchhhh
Q 014049 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQL 349 (431)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l 349 (431)
.+.+.+|++.+.++|++. .|++|+++++|++|..+ +++ +.|++.+|++++||.||++ |.....+|+...++.|
T Consensus 104 ~~~~~~g~~~l~~~l~~~---~g~~i~~~~~V~~i~~~--~~~-~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l 177 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKE---SGAEVYFRHRVTQINLR--DDK-WEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI 177 (342)
T ss_dssp EEECTTCTTHHHHHHHHH---HTCEEESSCCEEEEEEC--SSS-EEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS
T ss_pred ceecCCCHHHHHHHHHHh---cCCEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcCEEEECCCHHHHHHHhccccccc
Confidence 346789999999988764 38999999999999886 444 4688888988999999964 5444456654344556
Q ss_pred hhhhhhhcccCCCCeEEEEEEEeCCCC
Q 014049 350 QESFQAFSLSDNKGKVARGICITRSSL 376 (431)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~i~~~~~ 376 (431)
|+......+...+..+.+..+.+++++
T Consensus 178 ~~~~~~~l~~~~~~~~~~v~l~~~~~~ 204 (342)
T 3qj4_A 178 SECQRQQLEAVSYSSRYALGLFYEAGT 204 (342)
T ss_dssp CHHHHHHHHTCCBCCEEEEEEECSSCC
T ss_pred CHHHHHHHhcCCccccEEEEEEECCCC
Confidence 554443334456778888888888764
No 33
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.60 E-value=2.1e-15 Score=156.03 Aligned_cols=104 Identities=9% Similarity=-0.023 Sum_probs=70.3
Q ss_pred EEeecCCcchHHHHHHHHHHhcCcEEEeCccee--EEEEecCCC-----cEEEE-EeCCCc--EEEeCEEEEC-CCCCC-
Q 014049 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVI--SLLTDQNSG-----SYKGV-RLASGQ--DILSHKLVLD-PSFTV- 338 (431)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~--~I~~~~~~g-----~~~gV-~~~~G~--~i~Ad~VI~~-p~~~~- 338 (431)
++++.||+++|+++|.+.+.. |+.|+++++|+ +|..+. ++ ..+.| ...+|+ +++||+||++ |...+
T Consensus 339 ~~~i~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~-~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~ 416 (721)
T 3ayj_A 339 YTLPVTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANAC-HSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLT 416 (721)
T ss_dssp ECCSSSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEE-ECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHH
T ss_pred eeEECCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECC-CCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHh
Confidence 678999999999999886532 78899999999 998863 33 13456 446777 7999999985 43222
Q ss_pred -----CCCC-------C---------Cc---hhh-h-h-------hhhhhhcccCCCCeEEEEEEEe-----CCCC
Q 014049 339 -----PGSL-------A---------SS---HQQ-L-Q-------ESFQAFSLSDNKGKVARGICIT-----RSSL 376 (431)
Q Consensus 339 -----~~l~-------~---------~~---~~~-l-~-------~~~~~~~~~~~~~~~~~~~~i~-----~~~~ 376 (431)
..+. . ++ .++ | | ..+....++..++..+|..+.+ +++|
T Consensus 417 ~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~f 492 (721)
T 3ayj_A 417 PIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPW 492 (721)
T ss_dssp HHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTT
T ss_pred hccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCc
Confidence 1111 0 00 222 3 4 4444444556788889999999 7886
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.36 E-value=5.3e-12 Score=122.03 Aligned_cols=61 Identities=18% Similarity=0.209 Sum_probs=48.4
Q ss_pred EEeecCC---cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCC--cEEEeCEEEEC
Q 014049 271 LIYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG--QDILSHKLVLD 333 (431)
Q Consensus 271 ~~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G--~~i~Ad~VI~~ 333 (431)
.+.+..| ...+.++|.+.+++.|++|+++++|++|..+ ++..+.|++.+| ++++||.||..
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~a~~VV~A 204 (369)
T 3dme_A 139 LVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVR--PEGGFELDFGGAEPMTLSCRVLINA 204 (369)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSSEEEEECTTSCEEEEEEEEEEC
T ss_pred eECCCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCceEEEEECCCceeEEEeCEEEEC
Confidence 3445554 3578899999999999999999999999986 444456888888 48999999954
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.34 E-value=2.2e-11 Score=120.93 Aligned_cols=61 Identities=21% Similarity=0.202 Sum_probs=52.2
Q ss_pred EEeecC-C---cchHHHHHHHHHHhcCcEEEeCc---ceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 271 LIYPIY-G---QGELPQAFCRRAAVKGCLYVLRM---PVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 271 ~~~p~g-G---~~~l~~al~r~~~~~Gg~i~l~~---~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
++.+.+ | ...+.++|.+.++++|++|++++ +|++|..+ ++++++|++.+|++++||+||+.
T Consensus 149 ~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~t~~G~~i~Ad~VV~A 216 (438)
T 3dje_A 149 YFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE--NNDVKGAVTADGKIWRAERTFLC 216 (438)
T ss_dssp EEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE--TTEEEEEEETTTEEEECSEEEEC
T ss_pred EEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec--CCeEEEEEECCCCEEECCEEEEC
Confidence 455655 5 35788999999999999999999 99999987 78888899999989999999953
No 36
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.30 E-value=1.7e-10 Score=110.14 Aligned_cols=44 Identities=27% Similarity=0.362 Sum_probs=41.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS 65 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~ 65 (431)
++||+|||||++||++|..|+++|.+|+||||++.+||++.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~ 45 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR 45 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe
Confidence 37999999999999999999999999999999999999988753
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.25 E-value=8.3e-11 Score=114.22 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=48.8
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
++++.+|. ..+.++|.+.+++.|++|+++++|++|..+ +++ ++|++.+| +++||+||+.
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-~~V~t~~g-~i~a~~VV~A 204 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV--DGA-WEVRCDAG-SYRAAVLVNA 204 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE--TTE-EEEECSSE-EEEESEEEEC
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe--CCe-EEEEeCCC-EEEcCEEEEC
Confidence 45666663 588899999999999999999999999987 555 68887777 8999999954
No 38
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.24 E-value=1.1e-10 Score=122.51 Aligned_cols=59 Identities=19% Similarity=0.206 Sum_probs=50.0
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
.+++.+|. ..+.++|.+.+++.|++|+++++|++|..+ +++ ++|++.+|++++||.||+
T Consensus 406 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~i~Ad~VVl 467 (676)
T 3ps9_A 406 ITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK--DDC-WLLNFAGDQQATHSVVVL 467 (676)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEE
T ss_pred EEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe--CCe-EEEEECCCCEEECCEEEE
Confidence 45666663 688899999999999999999999999987 565 588888888999999995
No 39
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.20 E-value=5.6e-10 Score=113.09 Aligned_cols=42 Identities=26% Similarity=0.383 Sum_probs=39.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (431)
.++||||||+|++||+||+.|+++|.+|+||||.+.+||.+.
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~ 81 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATA 81 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcch
Confidence 469999999999999999999999999999999999998754
No 40
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.20 E-value=7.3e-11 Score=116.24 Aligned_cols=58 Identities=10% Similarity=0.113 Sum_probs=48.8
Q ss_pred EEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..++......+.++|.+.+++.|++|+++++|++|..+ ++. +.|++.+| +++||.||.
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~--~~~-~~V~~~~g-~i~ad~VIl 181 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT--ASG-FRVTTSAG-TVDAASLVV 181 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE--TTE-EEEEETTE-EEEESEEEE
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe--CCE-EEEEECCc-EEEeeEEEE
Confidence 35676667799999999999999999999999999886 444 67888777 899999994
No 41
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.20 E-value=2.2e-10 Score=112.24 Aligned_cols=60 Identities=25% Similarity=0.346 Sum_probs=50.4
Q ss_pred EEeecCCcc---hHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 271 LIYPIYGQG---ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 271 ~~~p~gG~~---~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.+++.+|.- .+.++|.+.+++.|++|+++++|++|..+ ++++++|++.+| +++||.||..
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~g-~~~a~~vV~a 225 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD--GEKVTGVKTTRG-TIHAGKVALA 225 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTC-CEEEEEEEEC
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe--CCEEEEEEeCCc-eEECCEEEEC
Confidence 556766654 78899999999999999999999999876 677788988777 7999998853
No 42
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.18 E-value=1.3e-11 Score=113.42 Aligned_cols=46 Identities=26% Similarity=0.331 Sum_probs=42.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccccChh
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIA 67 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~ 67 (431)
++||+|||||++||+||..|+++|++|+||||++++||++++....
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~ 47 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSD 47 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEET
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccC
Confidence 3899999999999999999999999999999999999999886543
No 43
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.17 E-value=2.4e-10 Score=120.04 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=48.7
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCc-EEEeCEEEE
Q 014049 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVL 332 (431)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~-~i~Ad~VI~ 332 (431)
.+++.+|. ..+.++|.+.+++.|++|+++++|++|..+ +++ +.|++.+|+ +++||.||+
T Consensus 401 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~~i~Ad~VVl 463 (689)
T 3pvc_A 401 IHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI--DSQ-WQLTFGQSQAAKHHATVIL 463 (689)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC--SSS-EEEEEC-CCCCEEESEEEE
T ss_pred EEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe--CCe-EEEEeCCCcEEEECCEEEE
Confidence 55666664 688899999999999999999999999987 555 578888887 899999995
No 44
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.15 E-value=7.7e-10 Score=107.61 Aligned_cols=60 Identities=25% Similarity=0.244 Sum_probs=48.9
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
++.+..|. ..+.++|.+.+++.|++|+.+++|++|..+ ++++++|++.+| +++||.||..
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~v~gv~~~~g-~i~a~~VV~A 200 (382)
T 1y56_B 138 SWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE--NNEIKGVKTNKG-IIKTGIVVNA 200 (382)
T ss_dssp EEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTE-EEECSEEEEC
T ss_pred EEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE--CCEEEEEEECCc-EEECCEEEEC
Confidence 44455553 578889999999999999999999999886 677777988777 7999999954
No 45
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.14 E-value=2.5e-10 Score=113.77 Aligned_cols=60 Identities=20% Similarity=0.327 Sum_probs=51.0
Q ss_pred EEeecCC-cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 271 LIYPIYG-QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 271 ~~~p~gG-~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..+|..+ ...+.++|.+.+++.|++|+++++|++|..+ ++++++|++.+|++++||.||.
T Consensus 125 ~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~--~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 125 RMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE--NGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTCCEEECSCEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec--CCcEEEEEECCCCEEECCEEEE
Confidence 3466443 5688899999999999999999999999887 7777899998898899999884
No 46
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.14 E-value=1.7e-09 Score=110.99 Aligned_cols=59 Identities=22% Similarity=0.193 Sum_probs=48.3
Q ss_pred EeecCC---cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCC-CcEEEEEeC--CCc--EEEeCEEEE
Q 014049 272 IYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (431)
Q Consensus 272 ~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~-g~~~gV~~~--~G~--~i~Ad~VI~ 332 (431)
.++.+| ...+.++|.+.+++.|++|+++++|++|..+ + ++++||++. +|+ +++||.||+
T Consensus 240 ~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~g~~~~i~A~~VVl 306 (566)
T 1qo8_A 240 HRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN--DDHSVVGAVVHGKHTGYYMIGAKSVVL 306 (566)
T ss_dssp EECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC--TTSBEEEEEEEETTTEEEEEEEEEEEE
T ss_pred eecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC--CCCcEEEEEEEeCCCcEEEEEcCEEEE
Confidence 355554 3578899999999999999999999999987 6 888888775 676 689999885
No 47
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.13 E-value=3.4e-09 Score=108.81 Aligned_cols=60 Identities=18% Similarity=0.240 Sum_probs=47.8
Q ss_pred EeecCC---cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeC--CCc--EEEeCEEEE
Q 014049 272 IYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA--SGQ--DILSHKLVL 332 (431)
Q Consensus 272 ~~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~--~G~--~i~Ad~VI~ 332 (431)
.++.+| ...+.+.|.+.+++.|++|+++++|++|..+ ++++++||++. +|+ +++||.||+
T Consensus 245 ~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~a~~VVl 311 (571)
T 1y0p_A 245 HRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKD-DKGTVKGILVKGMYKGYYWVKADAVIL 311 (571)
T ss_dssp EESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-TTSCEEEEEEEETTTEEEEEECSEEEE
T ss_pred EecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEc-CCCeEEEEEEEeCCCcEEEEECCeEEE
Confidence 345543 2578899999999999999999999999986 13888888765 576 689999885
No 48
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.09 E-value=6.4e-10 Score=112.75 Aligned_cols=53 Identities=23% Similarity=0.269 Sum_probs=46.9
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
..+.++|.+.+++.|++|+++++|++|..+ ++++++|++.+|+++.||.||..
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~~G~~i~Ad~VVlA 272 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME--DGQITGVTLSNGEEIKSRHVVLA 272 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES--SSBEEEEEETTSCEEECSCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe--CCEEEEEEECCCCEEECCEEEEC
Confidence 567788888888899999999999999886 77888999999999999999954
No 49
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.06 E-value=4.3e-10 Score=115.10 Aligned_cols=61 Identities=26% Similarity=0.348 Sum_probs=49.3
Q ss_pred EEeecCC--cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCC---C--cEEEeCEEEEC
Q 014049 271 LIYPIYG--QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS---G--QDILSHKLVLD 333 (431)
Q Consensus 271 ~~~p~gG--~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~---G--~~i~Ad~VI~~ 333 (431)
+.|+.|- ...+..+|.+.+++.|++|+++++|++|..+ ++++++|++.+ | .+++||.||..
T Consensus 160 ~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A~~VV~A 227 (561)
T 3da1_A 160 GIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYAKKVVNA 227 (561)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEEC
T ss_pred EEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEECCEEEEC
Confidence 5566543 2578899999999999999999999999987 78888888754 4 47899998853
No 50
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.04 E-value=2.8e-09 Score=114.28 Aligned_cols=60 Identities=25% Similarity=0.273 Sum_probs=50.1
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
++++..|. ..+.++|.+.+++.|++|+.+++|++|..+ ++++++|++.+| +++||+||..
T Consensus 140 ~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~--~~~v~~V~t~~G-~i~Ad~VV~A 202 (830)
T 1pj5_A 140 LHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS--GGRVTGVQTADG-VIPADIVVSC 202 (830)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTE-EEECSEEEEC
T ss_pred EEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe--CCEEEEEEECCc-EEECCEEEEC
Confidence 45566663 378899999999999999999999999987 677778988777 7999999953
No 51
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.02 E-value=1.9e-09 Score=107.31 Aligned_cols=60 Identities=18% Similarity=0.298 Sum_probs=48.0
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEeCcceeEEEE---------------ecCCCcEEEEEeCCCcEE--EeCEE
Q 014049 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLT---------------DQNSGSYKGVRLASGQDI--LSHKL 330 (431)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~---------------~~~~g~~~gV~~~~G~~i--~Ad~V 330 (431)
++.+..|. ..+.++|.+.+++.|++|+.+++|++|.. + ++++++|++.+| ++ +||.|
T Consensus 170 ~~~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~--~~~v~~V~t~~g-~i~~~Ad~V 246 (448)
T 3axb_A 170 VLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQ--EARASAAVLSDG-TRVEVGEKL 246 (448)
T ss_dssp EEESSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTS--CEEEEEEEETTS-CEEEEEEEE
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccC--CCceEEEEeCCC-EEeecCCEE
Confidence 44454442 47889999999999999999999999987 4 566778888777 68 99999
Q ss_pred EEC
Q 014049 331 VLD 333 (431)
Q Consensus 331 I~~ 333 (431)
|..
T Consensus 247 V~A 249 (448)
T 3axb_A 247 VVA 249 (448)
T ss_dssp EEC
T ss_pred EEC
Confidence 853
No 52
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.97 E-value=2.9e-08 Score=101.82 Aligned_cols=58 Identities=24% Similarity=0.325 Sum_probs=46.7
Q ss_pred eecCC---cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCC-CcEEEEEeC--CCc--EEEeCEEEE
Q 014049 273 YPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (431)
Q Consensus 273 ~p~gG---~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~-g~~~gV~~~--~G~--~i~Ad~VI~ 332 (431)
++.+| ...+.+.|.+.+++.|++|+++++|++|..+ + ++++||++. +|+ +++||.||+
T Consensus 246 ~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~--~~g~v~GV~~~~~~G~~~~i~A~~VVl 311 (572)
T 1d4d_A 246 RPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILED--ASGKVTGVLVKGEYTGYYVIKADAVVI 311 (572)
T ss_dssp ESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC----CCEEEEEEEETTTEEEEEECSEEEE
T ss_pred ecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEEC--CCCeEEEEEEEeCCCcEEEEEcCEEEE
Confidence 44444 3478899999999999999999999999876 5 888888775 565 689999985
No 53
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.94 E-value=4.7e-10 Score=109.24 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
|++|||||||||++||+||..|+++|++|+|+||++.+|...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~ 43 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCC
Confidence 567999999999999999999999999999999999887643
No 54
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.79 E-value=3.1e-09 Score=101.23 Aligned_cols=42 Identities=14% Similarity=0.125 Sum_probs=38.7
Q ss_pred cccEEEECCChhHHHHHHHHhh--CCCcEEEEccCCCCCCcccc
Q 014049 22 AFDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~--~G~~V~vlE~~~~~GG~~~t 63 (431)
++||+|||||++||+||.+|++ +|++|+|+|+++++||.+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 5799999999999999999975 59999999999999998765
No 55
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.72 E-value=6.5e-09 Score=98.94 Aligned_cols=60 Identities=8% Similarity=0.056 Sum_probs=40.2
Q ss_pred CCCccCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccC----CCCCCccccc
Q 014049 5 ESESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN----PFYGSHFSSL 64 (431)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~----~~~GG~~~t~ 64 (431)
.....++.|.-++.....+||+|||||++||+||..|+++|++|+|+|++ ..+||.+...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~ 68 (338)
T 3itj_A 5 HHHHHHSSGLVPRGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT 68 (338)
T ss_dssp ----------------CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS
T ss_pred ccccccccCCCCCCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc
Confidence 33445555555555666899999999999999999999999999999994 5899987753
No 56
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.72 E-value=7.1e-09 Score=97.59 Aligned_cols=42 Identities=21% Similarity=0.195 Sum_probs=35.5
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 19 ~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
.|++|||+|||||++||+||.+|+|+|++|+|+|++. +||..
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~ 44 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRV 44 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGG
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCee
Confidence 4778999999999999999999999999999999974 56643
No 57
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.70 E-value=1e-08 Score=96.71 Aligned_cols=41 Identities=20% Similarity=0.383 Sum_probs=37.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+|||+|||||.+||+||.+|++.|++|+|+|++ .+||.+..
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~ 46 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMAN 46 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeec
Confidence 699999999999999999999999999999985 68887653
No 58
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.69 E-value=2.3e-07 Score=91.18 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=48.3
Q ss_pred cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEECC
Q 014049 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (431)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p 334 (431)
..++.+.+.+.+++.|.+|++++.|++|..+ ++++.+|++++|+++.||.||+..
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~v~l~dG~~i~aD~Vv~a~ 247 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGD--GTKVTGVRMQDGSVIPADIVIVGI 247 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEES--SSBEEEEEESSSCEEECSEEEECS
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECC
Confidence 4678888889899999999999999999875 678889999999999999999643
No 59
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.67 E-value=5.6e-07 Score=88.16 Aligned_cols=56 Identities=16% Similarity=0.219 Sum_probs=49.0
Q ss_pred CcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEECC
Q 014049 277 GQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (431)
Q Consensus 277 G~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p 334 (431)
...++.+.+.+.+++.|.+++++++|++|..+ ++++.+|++++|+++.||.||+..
T Consensus 182 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~V~~~dG~~i~aD~Vv~a~ 237 (404)
T 3fg2_P 182 VTPEISSYFHDRHSGAGIRMHYGVRATEIAAE--GDRVTGVVLSDGNTLPCDLVVVGV 237 (404)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCEEECSEEEECC
T ss_pred cCHHHHHHHHHHHHhCCcEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECc
Confidence 34678888989999999999999999999876 678889999999999999999643
No 60
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.66 E-value=1e-08 Score=103.30 Aligned_cols=56 Identities=27% Similarity=0.293 Sum_probs=39.6
Q ss_pred ccCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCccccc
Q 014049 8 SELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSL 64 (431)
Q Consensus 8 ~~~~~~~~~~~~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~ 64 (431)
+.++...|+..+ .+|||+|||||.+||+||..|++.|++|+|+|+++.+||.|...
T Consensus 12 ~~~~~n~~~~~m-~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~ 67 (491)
T 3urh_A 12 DLGTENLYFQSM-MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNV 67 (491)
T ss_dssp ---------------CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHH
T ss_pred ccCcCCcchhhc-ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc
Confidence 445556666644 45999999999999999999999999999999999999976643
No 61
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.65 E-value=1.7e-08 Score=95.24 Aligned_cols=37 Identities=14% Similarity=0.161 Sum_probs=34.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
.+.|||||||||.+||+||..|+++|++|+|+|++..
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 3469999999999999999999999999999999763
No 62
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.64 E-value=2e-08 Score=97.46 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=47.9
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
++++.+|. ..+.++|.+.+++.|++|+++++|++|..+ ++++ +|++.+| +++||.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~-~v~~~~g-~~~a~~vV~A 214 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD--GEAL-FIKTPSG-DVWANHVVVA 214 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS--SSSE-EEEETTE-EEEEEEEEEC
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE--CCEE-EEEcCCc-eEEcCEEEEC
Confidence 55666664 578899999999999999999999999876 5554 7887766 8999999853
No 63
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.62 E-value=2e-08 Score=97.95 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
|+++||||||||++||++|+.|+++|++|+|+|+++.+|+..
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~ 43 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCc
Confidence 456999999999999999999999999999999999887643
No 64
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.61 E-value=1.8e-08 Score=101.31 Aligned_cols=52 Identities=21% Similarity=0.280 Sum_probs=44.1
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.++.+.+.+.+++.|.+++++++|++|..+ +++ +.|++++|+++.||.||+.
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vi~A 283 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQST--ENC-YNVVLTNGQTICADRVMLA 283 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEC--SSS-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEee--CCE-EEEEECCCcEEEcCEEEEe
Confidence 467888888889999999999999999875 455 4788899999999999953
No 65
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.59 E-value=1.9e-08 Score=98.51 Aligned_cols=43 Identities=26% Similarity=0.277 Sum_probs=39.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (431)
|+++||||||||++||+||..|+++|.+|+|+|+++.+|+++.
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~ 44 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL 44 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcE
Confidence 4579999999999999999999999999999999999987654
No 66
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.59 E-value=3.9e-08 Score=103.14 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=49.7
Q ss_pred CCCCCCccCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 2 TGNESESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+|.|.+..|+.+..++ ....+||+|||||++||+||..|+++|++|+|+|+++++||.+..
T Consensus 372 ~g~e~~~~~~~~~~~~-~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 372 MGEEWRRGWHPERIRA-KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp TTTTTTTCCCSSCCCC-CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred cCcccccccCccccCc-ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 4556555565444444 345689999999999999999999999999999999999998664
No 67
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.59 E-value=3.1e-08 Score=94.81 Aligned_cols=44 Identities=25% Similarity=0.285 Sum_probs=41.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
|+++||+|||||++||++|..|++.|++|+|+|+++.+||.+..
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 35689999999999999999999999999999999999998764
No 68
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.57 E-value=4e-08 Score=95.99 Aligned_cols=59 Identities=22% Similarity=0.214 Sum_probs=45.5
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
++.+.+|. ..+.++|.+.+++.|++|+++++|++|..+ ++. +.|++.+| +++||.||..
T Consensus 142 ~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-v~v~t~~g-~i~a~~VV~A 203 (397)
T 2oln_A 142 FLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD--ADG-VSVTTDRG-TYRAGKVVLA 203 (397)
T ss_dssp EEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEESSC-EEEEEEEEEC
T ss_pred EEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc--CCe-EEEEECCC-EEEcCEEEEc
Confidence 44555553 467888999888999999999999999886 554 45776554 7999998853
No 69
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.57 E-value=6.8e-08 Score=91.06 Aligned_cols=57 Identities=14% Similarity=0.190 Sum_probs=47.2
Q ss_pred CCccCCCCCCCCCCC------------------CcccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCCCccc
Q 014049 6 SESELPVPPYPPIEP------------------TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 6 ~~~~~~~~~~~~~~~------------------~~~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~GG~~~ 62 (431)
.+..||.+..+++.. ..+||+|||+|++||+||..|+++ |++|+|+|+++.+||.+.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~ 107 (326)
T 2gjc_A 31 KKEDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp CSTTCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred HhcCCCccccccccccccchhhhhhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccc
Confidence 345687777666432 246999999999999999999999 999999999999998544
No 70
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.56 E-value=4e-08 Score=96.42 Aligned_cols=49 Identities=16% Similarity=0.037 Sum_probs=34.9
Q ss_pred CCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 11 PVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 11 ~~~~~~~~~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
|.++-++-.++.+||+|||||++||++|..|+++|++|+|+|+++.++.
T Consensus 12 ~~~~~~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~ 60 (407)
T 3rp8_A 12 HSSGENLYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP 60 (407)
T ss_dssp -----------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--
T ss_pred cCCCCcccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 3333444455679999999999999999999999999999999987753
No 71
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.55 E-value=3.4e-08 Score=94.04 Aligned_cols=45 Identities=20% Similarity=0.337 Sum_probs=40.7
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 19 ~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
++.++||+|||||++||+||..|++.|++|+|+|+++.+||.+..
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 46 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA 46 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec
Confidence 345799999999999999999999999999999999999997753
No 72
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.54 E-value=3.4e-08 Score=98.82 Aligned_cols=43 Identities=23% Similarity=0.260 Sum_probs=40.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
.+|||+|||||.+||+||..|++.|++|+++|+++.+||.|..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 4699999999999999999999999999999999999998764
No 73
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.53 E-value=5.9e-08 Score=91.78 Aligned_cols=53 Identities=25% Similarity=0.317 Sum_probs=38.4
Q ss_pred cCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 9 ELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 9 ~~~~~~~~~~~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
.+|...-.. ++.++||+|||||++|++||..|+++|++|+|+|+ ..+||.+..
T Consensus 4 ~l~~~~~~~-m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 4 NLHAVSSEE-KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp -----------CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred ccccccccc-ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 344443333 33469999999999999999999999999999999 578887654
No 74
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.52 E-value=4.4e-08 Score=94.34 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=40.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 19 ~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
++..+||+|||||++||+||..|+++|++|+|+|+++.+||.+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 55 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA 55 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc
Confidence 455799999999999999999999999999999999999998753
No 75
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.51 E-value=7.3e-08 Score=89.80 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCcEEEEccCCCCCCcc
Q 014049 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~-G~~V~vlE~~~~~GG~~ 61 (431)
.++||+|||||++||+||..|++. |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 358999999999999999999997 99999999999998754
No 76
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.51 E-value=8.5e-08 Score=92.47 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=36.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..++||||||||++||++|+.|+++|++|+|||++...+|
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 3578999999999999999999999999999999885444
No 77
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.51 E-value=5.8e-08 Score=98.91 Aligned_cols=46 Identities=17% Similarity=0.273 Sum_probs=40.7
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCccccc
Q 014049 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSL 64 (431)
Q Consensus 19 ~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~ 64 (431)
....+||||||||++|+++|..|++.|++|+|+|+++.+||.+...
T Consensus 18 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~ 63 (549)
T 4ap3_A 18 GTTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWN 63 (549)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC
T ss_pred CCCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccC
Confidence 3457999999999999999999999999999999999999977643
No 78
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.50 E-value=7.5e-08 Score=93.05 Aligned_cols=58 Identities=19% Similarity=0.293 Sum_probs=45.8
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
++.+..|. ..+.++|.+.++..|++|+.+++|++|..+ +++ +.|++.+| +++||.||.
T Consensus 138 ~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~-~~v~~~~g-~~~a~~vV~ 198 (372)
T 2uzz_A 138 LFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHD--DDG-VTIETADG-EYQAKKAIV 198 (372)
T ss_dssp EEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSS-EEEEESSC-EEEEEEEEE
T ss_pred EEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc--CCE-EEEEECCC-eEEcCEEEE
Confidence 44455553 478899999999999999999999999876 444 56877776 599999885
No 79
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.49 E-value=8.5e-08 Score=94.16 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=37.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCc-EEEEccCCCCCCccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFYGSHFS 62 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~-V~vlE~~~~~GG~~~ 62 (431)
|..+||+|||||++||++|..|+++|.+ |+|+|+++.++....
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~ 45 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGV 45 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccccee
Confidence 4568999999999999999999999999 999999998765433
No 80
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.48 E-value=6.2e-08 Score=96.79 Aligned_cols=53 Identities=13% Similarity=0.242 Sum_probs=43.8
Q ss_pred cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEE-eCCCcEEEeCEEEEC
Q 014049 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR-LASGQDILSHKLVLD 333 (431)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~-~~~G~~i~Ad~VI~~ 333 (431)
..++.+.+.+.+++.|.+|+++++|++|..+ ++..+.|+ +++|+ +.||.||+.
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~g~-i~aD~Vv~a 263 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSAD--ADGRRVATTMKHGE-IVADQVMLA 263 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSCEEEEESSSCE-EEESEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCCEEEEEEcCCCe-EEeCEEEEe
Confidence 3567888888899999999999999999875 34435788 88888 999999964
No 81
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.48 E-value=9.9e-08 Score=93.87 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=41.2
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCc--EEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ--DILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~--~i~Ad~VI~ 332 (431)
..+.+.|.+.+++.|++|+.+++|++|..+. ++..+.|++.+|+ +++||.||.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFG-TDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEETTSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEEEEEEcCCCCEEEEEcCEEEE
Confidence 3455667777778899999999999998872 4444567778888 799999884
No 82
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.48 E-value=8.9e-08 Score=90.77 Aligned_cols=41 Identities=12% Similarity=0.103 Sum_probs=37.8
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCCCccc
Q 014049 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~GG~~~ 62 (431)
++||||||||++||+||+.|+++ |++|+|+|+++.+||.+.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc
Confidence 58999999999999999999997 999999999999987543
No 83
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.48 E-value=9.4e-08 Score=93.48 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=36.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
..+||+|||||++||++|..|+++|.+|+|+|+++.++.+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 4689999999999999999999999999999999887654
No 84
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.47 E-value=1.2e-07 Score=89.52 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=37.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
++||+|||||++||+||..|+++|++|+|+|++ +||.+..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 589999999999999999999999999999999 9998775
No 85
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.45 E-value=1.4e-07 Score=93.84 Aligned_cols=43 Identities=21% Similarity=0.199 Sum_probs=40.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC--cEEEEccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~--~V~vlE~~~~~GG~~~t 63 (431)
..+||+|||||++||+||..|++.|. +|+|+|+++.+||.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 46899999999999999999999999 99999999999997754
No 86
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.45 E-value=1.5e-07 Score=91.53 Aligned_cols=51 Identities=18% Similarity=0.220 Sum_probs=42.3
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
..+.++|.+.++..|++|+.+++|++|..+ ++. +.|++.+| +++||.||..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~-~~v~~~~g-~~~a~~vV~A 200 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDIS--PDS-VKIETANG-SYTADKLIVS 200 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSC-EEEEETTE-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEec--CCe-EEEEeCCC-EEEeCEEEEe
Confidence 588899999999999999999999999876 444 46776655 7999999953
No 87
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.45 E-value=1.3e-07 Score=95.48 Aligned_cols=53 Identities=19% Similarity=0.100 Sum_probs=43.9
Q ss_pred cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEe---CCCc--EEEeCEEEEC
Q 014049 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVLD 333 (431)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~Ad~VI~~ 333 (431)
...+..+|.+.+++.|++|+.+++|++|..+ + ++++|++ .+|+ +++||.||..
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A~~VV~A 205 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQARGLVNA 205 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEESCEEEC
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEECCEEEEC
Confidence 3578899999999999999999999999876 4 5678887 3676 7899999853
No 88
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.45 E-value=8.7e-08 Score=90.80 Aligned_cols=43 Identities=21% Similarity=0.325 Sum_probs=40.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
..+||+|||||++||+||..|++.|++|+|+|+++.+||.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~ 48 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA 48 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh
Confidence 3589999999999999999999999999999999999998853
No 89
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.44 E-value=1.7e-07 Score=93.32 Aligned_cols=44 Identities=20% Similarity=0.194 Sum_probs=40.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCccc
Q 014049 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 19 ~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (431)
....+||+|||||++||+||..|+++|++|+|+|+++++||.+.
T Consensus 119 ~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 119 RELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp SSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 34568999999999999999999999999999999999999754
No 90
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.44 E-value=1.2e-07 Score=96.16 Aligned_cols=45 Identities=33% Similarity=0.468 Sum_probs=41.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 19 ~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
++.++||||||||++|++||..|++.|++|+|+|+++.+||.|..
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 84 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPH 84 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccc
Confidence 456799999999999999999999999999999999989998753
No 91
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.44 E-value=1.4e-07 Score=96.11 Aligned_cols=43 Identities=21% Similarity=0.329 Sum_probs=40.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (431)
+.++||+|||||++||+||..|+++|++|+|+|+++.+||.+.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 4579999999999999999999999999999999999999775
No 92
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.44 E-value=1.4e-07 Score=89.41 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=39.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+..+||+|||||++||+||..|++.|++|+++|++ .+||.+..
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 34689999999999999999999999999999999 78997764
No 93
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.43 E-value=1.3e-07 Score=94.71 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=37.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
.+|||+|||||.+||+||..|++.|++|+|+|+++.+||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 46999999999999999999999999999999998666654
No 94
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.43 E-value=1.6e-07 Score=91.18 Aligned_cols=41 Identities=15% Similarity=0.066 Sum_probs=36.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
|..+||+|||||++||++|..|+++|++|+|+|+++.+++.
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~ 49 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF 49 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC
Confidence 34689999999999999999999999999999999988754
No 95
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.42 E-value=1.5e-07 Score=92.28 Aligned_cols=40 Identities=25% Similarity=0.391 Sum_probs=36.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCCCc
Q 014049 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSH 60 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~GG~ 60 (431)
.++||||||||++||++|+.|+++ |++|+|||+++..+|.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 459999999999999999999999 9999999998766554
No 96
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.42 E-value=1.1e-07 Score=95.50 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=38.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+.+|||+|||||.+||+||..|++.|++|+|+|++ .+||.|..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~ 60 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVN 60 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccc
Confidence 34799999999999999999999999999999976 78988754
No 97
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.41 E-value=2.1e-07 Score=90.91 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=35.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
+..+||+|||||++||++|..|+++|++|+|+|+++..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 44689999999999999999999999999999999874
No 98
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.40 E-value=1.3e-07 Score=91.12 Aligned_cols=43 Identities=19% Similarity=0.305 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~~GG~~~t 63 (431)
|.++||+|||||++||+||..|++.|+ +|+|+|+++ +||.+..
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~ 45 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKH 45 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHT
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcccc
Confidence 346899999999999999999999999 999999999 9986654
No 99
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.40 E-value=1.8e-07 Score=84.42 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
.++||+|||||++||.||..|++.|.+|+|+|++..
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~ 37 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLD 37 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 468999999999999999999999999999999843
No 100
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.39 E-value=1.9e-07 Score=98.51 Aligned_cols=60 Identities=18% Similarity=0.253 Sum_probs=46.5
Q ss_pred CCCCCccCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 3 GNESESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
|.|.+..|....+++ ....+||+|||||++||+||..|++.|++|+|+|+++++||.+..
T Consensus 371 g~e~~~~~~~~~~~~-~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 371 GEEYRRGWHPEKFRQ-TKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp TTHHHHCCCTTCCCC-CSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred ccccccccccccccc-ccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 444433453222333 234689999999999999999999999999999999999998764
No 101
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.39 E-value=1.6e-07 Score=88.20 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEE-EccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~v-lE~~~~~GG~~~t 63 (431)
.++||+|||||++||+||..|+++|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 458999999999999999999999999999 999 788998754
No 102
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.39 E-value=1.8e-07 Score=89.16 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=38.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 19 ~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
++..+||+|||||++|++||..|++.|++|+|+|++ .+||.+..
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 345699999999999999999999999999999975 78887643
No 103
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.38 E-value=1.1e-07 Score=95.46 Aligned_cols=44 Identities=18% Similarity=0.257 Sum_probs=40.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+.++||+|||||++|++||..|++.|++|+|+|+++.+||.|..
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 46 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccce
Confidence 34699999999999999999999999999999999999997654
No 104
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.37 E-value=2.8e-07 Score=94.61 Aligned_cols=41 Identities=22% Similarity=0.225 Sum_probs=37.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
|..+||||||||++||++|+.|+++|++|+|+|+++.+++.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~ 61 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYR 61 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCc
Confidence 45699999999999999999999999999999999776644
No 105
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.37 E-value=2.6e-07 Score=93.64 Aligned_cols=44 Identities=30% Similarity=0.372 Sum_probs=39.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC--------CCCCccccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP--------FYGSHFSSL 64 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~--------~~GG~~~t~ 64 (431)
.+|||+|||||.+|++||..|++.|++|+++|+++ .+||.|...
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 82 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNV 82 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCc
Confidence 46999999999999999999999999999999975 789977543
No 106
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.37 E-value=1.4e-07 Score=94.94 Aligned_cols=41 Identities=24% Similarity=0.374 Sum_probs=37.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+|||+|||||.+|++||..|++.|++|+|+|++. +||.|..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~ 48 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCAR 48 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccc
Confidence 5999999999999999999999999999999974 9997743
No 107
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.37 E-value=1.7e-07 Score=93.73 Aligned_cols=42 Identities=24% Similarity=0.323 Sum_probs=39.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+|||+|||||.+|++||..|++.|++|+|+|+++.+||.|..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 43 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLN 43 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCC
Confidence 489999999999999999999999999999999999998764
No 108
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.36 E-value=2.8e-07 Score=89.99 Aligned_cols=51 Identities=14% Similarity=0.125 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHhc-CcEEEeCcceeEEEEecCCCcEE-EEEeCCCcEEEeCEEEE
Q 014049 280 ELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYK-GVRLASGQDILSHKLVL 332 (431)
Q Consensus 280 ~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~-gV~~~~G~~i~Ad~VI~ 332 (431)
.+.+.|.+.+++. |++|+++++|++|..+ +++++ .|++.+|++++||.||.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~--~~~v~g~v~~~~g~~~~ad~vV~ 160 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRD--ERHAIDQVRLNDGRVLRPRVVVG 160 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEEC--TTSCEEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEc--CCceEEEEEECCCCEEECCEEEE
Confidence 4556677777777 8999999999999876 45543 68888999999999884
No 109
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.36 E-value=1.4e-07 Score=94.03 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeC---CCc--EEEeCEEEE
Q 014049 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (431)
Q Consensus 280 ~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~---~G~--~i~Ad~VI~ 332 (431)
.+.+.|.+.++..|++|+++++|++|..+ ++++++|++. +|+ +++||.||.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~ad~VV~ 156 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYSKVVVE 156 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEcCEEEE
Confidence 45667777777889999999999999887 7777777664 676 799999994
No 110
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.36 E-value=1.7e-07 Score=94.09 Aligned_cols=44 Identities=20% Similarity=0.275 Sum_probs=40.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+.++||||||||.+|++||..|++.|++|+|+|+++.+||.|..
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 47 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLN 47 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceee
Confidence 34699999999999999999999999999999999999997653
No 111
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.36 E-value=2.9e-07 Score=95.13 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=39.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
..|||||||+|++||+||..|+++|++|+|+|+.+..||.+..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~~ 87 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIG 87 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTT
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcccc
Confidence 4699999999999999999999999999999999999986543
No 112
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=2.4e-07 Score=92.71 Aligned_cols=43 Identities=19% Similarity=0.231 Sum_probs=40.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.|..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLN 47 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccC
Confidence 4689999999999999999999999999999999999998754
No 113
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.36 E-value=1.9e-07 Score=93.57 Aligned_cols=44 Identities=25% Similarity=0.335 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+.++||||||||.+|++||..|++.|++|+|+|+++.+||.|..
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLN 47 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccc
Confidence 34699999999999999999999999999999999999998754
No 114
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.36 E-value=2e-07 Score=94.72 Aligned_cols=45 Identities=18% Similarity=0.178 Sum_probs=40.9
Q ss_pred CCcccEEEECCChhHHHHHHHHh-hCCCcEEEEccCCCCCCccccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAAS-ASGKSVLHLDPNPFYGSHFSSL 64 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La-~~G~~V~vlE~~~~~GG~~~t~ 64 (431)
+.++||||||||++||+||..|+ +.|++|+|+|+++.+||.+...
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~ 51 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWN 51 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCccccc
Confidence 34689999999999999999999 9999999999999999977643
No 115
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.35 E-value=2.6e-07 Score=92.87 Aligned_cols=44 Identities=30% Similarity=0.320 Sum_probs=39.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEcc--------CCCCCCccccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDP--------NPFYGSHFSSL 64 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~--------~~~~GG~~~t~ 64 (431)
.+|||+|||||.+||+||..|++.|++|+++|+ +..+||.|...
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 56 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNV 56 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeeccc
Confidence 469999999999999999999999999999998 66899977543
No 116
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.35 E-value=2.6e-07 Score=93.98 Aligned_cols=44 Identities=23% Similarity=0.335 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+.++||||||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~ 50 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYW 50 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 34689999999999999999999999999999999999998753
No 117
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.34 E-value=3.1e-07 Score=92.93 Aligned_cols=39 Identities=38% Similarity=0.596 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
+.++||||||||++||++|+.|+++|++|+|+|+++..+
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~ 43 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPR 43 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCC
Confidence 346999999999999999999999999999999998544
No 118
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.34 E-value=3.5e-07 Score=93.54 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=33.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
.++||||||||++||++|+.|+++|++|+|||+++.++
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 35899999999999999999999999999999998875
No 119
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.34 E-value=2.3e-07 Score=95.36 Aligned_cols=53 Identities=13% Similarity=0.195 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEe---CCCc--EEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~Ad~VI~ 332 (431)
..+.++|.+.+...|++|+++++|.+|..+ ++++++||.+ .+|+ +++|+.||+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~-~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 200 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKN-QDGAVVGCTALCIETGEVVYFKARATVL 200 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEEC-TTSCEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEEC-CCCEEEEEEEEEcCCCeEEEEEcCEEEE
Confidence 578899999988999999999999999874 2578888875 4676 589999884
No 120
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.34 E-value=2.2e-07 Score=92.54 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=43.8
Q ss_pred cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
-..+.+.+.+.+++.|.+++++++|++|..+ ++. +.|++++|+++.||.||+.
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~~D~vv~A 259 (455)
T 2yqu_A 207 DLEVSRAAERVFKKQGLTIRTGVRVTAVVPE--AKG-ARVELEGGEVLEADRVLVA 259 (455)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEEe--CCE-EEEEECCCeEEEcCEEEEC
Confidence 3578888888888999999999999999876 443 4677778999999999953
No 121
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.34 E-value=2.2e-07 Score=88.22 Aligned_cols=44 Identities=14% Similarity=0.213 Sum_probs=39.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEcc----CCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDP----NPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~----~~~~GG~~~t 63 (431)
+..+||+|||||++|+++|..|++.|++|+|+|+ ....||.+..
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 4568999999999999999999999999999999 6778887654
No 122
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.33 E-value=4.3e-07 Score=91.54 Aligned_cols=40 Identities=18% Similarity=0.227 Sum_probs=35.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..++||+|||||++||++|+.|+++|.+|+|+||++.++.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 3468999999999999999999999999999999988753
No 123
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.33 E-value=2.4e-07 Score=96.17 Aligned_cols=52 Identities=15% Similarity=0.221 Sum_probs=44.4
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEe---CCCc--EEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~Ad~VI~ 332 (431)
..|.++|.+.+...|++|+.++.|.+|..+ +|+++||.+ .+|+ .++|+.||+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 214 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVAKGTLI 214 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEcCEEEE
Confidence 478899999988899999999999999987 788888865 4676 489999884
No 124
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.33 E-value=2.3e-07 Score=92.70 Aligned_cols=42 Identities=26% Similarity=0.491 Sum_probs=38.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+++||+|||||++|++||..|++.|++|+|+|++ .+||.+..
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~ 43 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLN 43 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccc
Confidence 4689999999999999999999999999999998 78887653
No 125
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.33 E-value=4.4e-07 Score=92.33 Aligned_cols=39 Identities=23% Similarity=0.361 Sum_probs=36.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
.++||+|||||++||++|+.|+++|.+|+|+||++.++.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~ 42 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSP 42 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 468999999999999999999999999999999987653
No 126
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.33 E-value=2.7e-07 Score=92.28 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+.++||+|||||++|++||..|++.|++|+|+|++ .+||.|..
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~ 44 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVN 44 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccC
Confidence 35689999999999999999999999999999998 78997753
No 127
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.33 E-value=2.6e-07 Score=92.26 Aligned_cols=52 Identities=13% Similarity=0.090 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCc-EEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~-~i~Ad~VI~~ 333 (431)
.++.+.+.+.+++.|.+++++++|++|..+ ++. +.|++++|+ ++.||.||..
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~G~~~i~~D~vv~a 259 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERD--AQG-TTLVAQDGTRLEGFDSVIWA 259 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEE--TTE-EEEEETTCCEEEEESEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCe-EEEEEeCCcEEEEcCEEEEC
Confidence 367778888888999999999999999875 343 578888999 8999999953
No 128
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.32 E-value=3.1e-07 Score=94.28 Aligned_cols=39 Identities=15% Similarity=0.283 Sum_probs=37.0
Q ss_pred cccEEEECCChhHHHHHHHHhhC------CCcEEEEccCCCCCCc
Q 014049 22 AFDLIVIGTGLPESVISAAASAS------GKSVLHLDPNPFYGSH 60 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~------G~~V~vlE~~~~~GG~ 60 (431)
++||||||||++||+||+.|+++ |.+|+||||++.+|+.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 58999999999999999999999 9999999999999875
No 129
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.32 E-value=4e-07 Score=93.23 Aligned_cols=61 Identities=18% Similarity=0.299 Sum_probs=47.4
Q ss_pred EEeecCCc--chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeC---CCc--EEEeCEEEEC
Q 014049 271 LIYPIYGQ--GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVLD 333 (431)
Q Consensus 271 ~~~p~gG~--~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~---~G~--~i~Ad~VI~~ 333 (431)
+.|+.|.. ..+..++.+.++..|++|+.+++|++|..+ ++++++|++. +|+ +++||.||..
T Consensus 178 ~~~~dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A~~VV~A 245 (571)
T 2rgh_A 178 GVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKAKLVINT 245 (571)
T ss_dssp EEECCEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEBSCEEEC
T ss_pred EEecCCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEcCEEEEC
Confidence 45554432 467888888889999999999999999987 6788888753 343 6999999853
No 130
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.32 E-value=4.4e-07 Score=94.18 Aligned_cols=52 Identities=13% Similarity=0.116 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHhc--CcEEEeCcceeEEEEecCCC---cEEEEEe---CCCc--EEEeCEEEE
Q 014049 279 GELPQAFCRRAAVK--GCLYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~--Gg~i~l~~~V~~I~~~~~~g---~~~gV~~---~~G~--~i~Ad~VI~ 332 (431)
..+.++|.+.++.. |.+|+.++.|.++.++ ++ +++||.. .+|+ +++|+.||+
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~--~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVL 227 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLD--KNTPNRIAGAVGFNLRANEVHIFKANAMVV 227 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEEC--SSSTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEe--CCccceEEEEEEEEcCCCcEEEEEeCEEEE
Confidence 46778888888877 9999999999999887 44 8888864 3554 589999885
No 131
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.32 E-value=4e-07 Score=92.89 Aligned_cols=39 Identities=13% Similarity=0.155 Sum_probs=36.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
++||+|||||++||++|+.|+++|.+|+|+||++.++..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~ 64 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITH 64 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC
Confidence 589999999999999999999999999999999987644
No 132
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.32 E-value=2.5e-07 Score=87.30 Aligned_cols=43 Identities=12% Similarity=0.194 Sum_probs=38.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
|..+||+|||||++||+||..|+++|++|+|+|+. .+||.+..
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 45 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTT 45 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEec
Confidence 45689999999999999999999999999999974 78887543
No 133
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.31 E-value=3.8e-07 Score=91.56 Aligned_cols=53 Identities=8% Similarity=0.154 Sum_probs=41.1
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCc-----EEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-----DILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~-----~i~Ad~VI~~ 333 (431)
.++.+.+.+.+++.|.++++++.|++|..+. ++. +.|++.+++ ++.||.||+.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~-~~v~~~~~~~~~~~~~~~D~vi~a 284 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQD-DGK-LLVKYKNVETGEESEDVYDTVLWA 284 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECT-TSC-EEEEEEETTTCCEEEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCc-EEEEEecCCCCceeEEEcCEEEEC
Confidence 4677888888899999999999999998751 343 356666554 7899999964
No 134
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.31 E-value=2.7e-07 Score=91.83 Aligned_cols=52 Identities=8% Similarity=0.091 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 280 ~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
++.+.+.+.+++.|.+++++++|++|..+ ++..+.|++++|+++.||.||..
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~i~~D~vv~a 260 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKN--TDGSLTLELEDGRSETVDCLIWA 260 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCcEEEEEECCCcEEEcCEEEEC
Confidence 57788888888999999999999999865 33335688889999999999953
No 135
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.31 E-value=2.7e-07 Score=92.52 Aligned_cols=54 Identities=4% Similarity=-0.036 Sum_probs=43.2
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCC-cEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG-QDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G-~~i~Ad~VI~~ 333 (431)
.++++.+.+.++..|.+++++++|++|..+ ++++.+.|++++| +++.||.||+.
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~~v~~~~G~~~i~~D~vv~a 280 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKN-VETDKLKIHMNDSKSIDDVDELIWT 280 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEC-C-CCCEEEEETTSCEEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEc-CCCcEEEEEECCCcEEEEcCEEEEC
Confidence 367788888888999999999999999764 1343457888899 78999999953
No 136
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.31 E-value=4.5e-07 Score=85.21 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=36.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCCCCCCcccc
Q 014049 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~~GG~~~t 63 (431)
|||+|||||++||+||..|++.|+ +|+|+|++ .+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 799999999999999999999999 99999995 78887654
No 137
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.30 E-value=4e-07 Score=92.60 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
..++||||||+|++||+||+.|++ |.+|+||||.+..||..
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCCh
Confidence 346899999999999999999999 99999999999887654
No 138
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.30 E-value=5.1e-07 Score=90.89 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=37.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
..+||+|||||++||++|..|++.|++|+|+|+++.+|++
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 4689999999999999999999999999999999999875
No 139
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.27 E-value=3.2e-07 Score=87.94 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCC------CcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G------~~V~vlE~~~~~GG 59 (431)
.||||||||++||++|+.|+++| ++|+|||++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 39999999999999999999998 99999999985544
No 140
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.26 E-value=6.7e-07 Score=90.07 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=36.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
.++||+|||||++||++|+.|+++|.+|+|+||++.++.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 49 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG 49 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 358999999999999999999999999999999988753
No 141
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.26 E-value=4.4e-07 Score=91.27 Aligned_cols=53 Identities=13% Similarity=0.139 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.++++.+.+.+++.|.+|+++++|++|..+ ++..+.|++++|+++.||.||+.
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a 283 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKN--ADGTRHVVFESGAEADYDVVMLA 283 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEECCCcEEEcCEEEEc
Confidence 367888888889999999999999999865 33335788889999999999954
No 142
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.26 E-value=4.8e-07 Score=93.23 Aligned_cols=52 Identities=19% Similarity=0.320 Sum_probs=44.4
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEe---CCCc--EEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~Ad~VI~ 332 (431)
..|.++|.+.+...|++|+.++.|.+|..+ +|+++||.+ .+|+ +++|+.||+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 211 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRAKNTVI 211 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478899999888899999999999999987 788888876 3676 689999884
No 143
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.25 E-value=4.2e-07 Score=90.73 Aligned_cols=42 Identities=31% Similarity=0.405 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+++||||||||.+|++||..|++.|++|+|+|+++ +||.|..
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~ 46 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLN 46 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCC
Confidence 46999999999999999999999999999999998 8987643
No 144
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.25 E-value=5.1e-07 Score=87.97 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=33.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
++||+|||||++||++|..|+++|++|+|+|+++..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 37 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPD 37 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 479999999999999999999999999999998753
No 145
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.25 E-value=6.5e-07 Score=87.36 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
.+|+|||||++||++|..|+++|++|+||||++.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 47999999999999999999999999999997654
No 146
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.25 E-value=5.8e-07 Score=92.02 Aligned_cols=45 Identities=20% Similarity=0.317 Sum_probs=35.9
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC-CCCC
Q 014049 15 YPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYGS 59 (431)
Q Consensus 15 ~~~~~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~-~~GG 59 (431)
..+....+|||||||||++|++||..|++.|.+|+|+|++. .+|+
T Consensus 14 ~~~~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 14 LVPRGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp ------CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred ccccccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 33444557999999999999999999999999999999985 5665
No 147
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.24 E-value=4e-07 Score=91.68 Aligned_cols=53 Identities=9% Similarity=0.156 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.++.+.+.+.+++.|.+++++++|++|..+ ++..+.|++++|+++.||.||+.
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a 287 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLN--TDGSKHVTFESGKTLDVDVVMMA 287 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEC--TTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCceEEEEECCCcEEEcCEEEEC
Confidence 367888888889999999999999999865 33335788889999999999964
No 148
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.24 E-value=6.6e-07 Score=83.21 Aligned_cols=58 Identities=19% Similarity=0.138 Sum_probs=44.0
Q ss_pred EEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEECCC
Q 014049 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (431)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p~ 335 (431)
+.+...+...+.+.+.+.++..|.+++. ++|++|.. ++ +|++.+|+++.+|.||....
T Consensus 166 v~~v~~~~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~---~~---~v~~~~g~~~~~D~vi~a~G 223 (297)
T 3fbs_A 166 TTFFTNGIVEPDADQHALLAARGVRVET-TRIREIAG---HA---DVVLADGRSIALAGLFTQPK 223 (297)
T ss_dssp EEEECTTTCCCCHHHHHHHHHTTCEEEC-SCEEEEET---TE---EEEETTSCEEEESEEEECCE
T ss_pred EEEEECCCCCCCHHHHHHHHHCCcEEEc-ceeeeeec---CC---eEEeCCCCEEEEEEEEEccC
Confidence 4445555556777788888899999995 99999853 22 67788999999999996543
No 149
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.23 E-value=5.3e-07 Score=90.73 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=39.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
.++||+|||+|++||+||..|+++ ++|+|+|+++++||.+..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 468999999999999999999999 999999999999998764
No 150
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.23 E-value=7.5e-07 Score=88.88 Aligned_cols=42 Identities=12% Similarity=0.279 Sum_probs=39.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCc---EEEEccCCCCCCccccc
Q 014049 23 FDLIVIGTGLPESVISAAASA---SGKS---VLHLDPNPFYGSHFSSL 64 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~---~G~~---V~vlE~~~~~GG~~~t~ 64 (431)
+||+|||||++||+||..|++ .|.+ |+|+|+++.+||.+...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~ 50 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYT 50 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecC
Confidence 699999999999999999999 9999 99999999999988753
No 151
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.23 E-value=7.1e-07 Score=88.19 Aligned_cols=33 Identities=9% Similarity=0.050 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 799999999999999999999999999999987
No 152
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=5.4e-07 Score=89.73 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=38.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
+|||||||||.+|++||..|++.|++|+|+|++ .+||.|..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~ 43 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLN 43 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcC
Confidence 589999999999999999999999999999998 88987753
No 153
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.22 E-value=4.8e-07 Score=90.17 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=38.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
.+|||||||||.+|++||..|++.|++|+|+|+ +.+||.|..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~ 45 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLN 45 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCC
Confidence 468999999999999999999999999999999 789998764
No 154
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.21 E-value=1.3e-06 Score=91.30 Aligned_cols=42 Identities=26% Similarity=0.411 Sum_probs=39.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (431)
..+||+|||||.+|+.||..|++.|++|+|+|+++++||.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 468999999999999999999999999999999999999864
No 155
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.21 E-value=1e-06 Score=89.62 Aligned_cols=52 Identities=15% Similarity=0.198 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..+.+.|.+.++..|++++.+ .|++|..+ +++.+++|++.+|++++||.||.
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~-~~g~~~~v~~~~g~~i~ad~vV~ 216 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLN-NRGYISNLLTKEGRTLEADLFID 216 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEEC-TTSCEEEEEETTSCEECCSEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEc-CCCcEEEEEECCCcEEEeCEEEE
Confidence 577888888888899999999 89999875 25666788888898999999994
No 156
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.21 E-value=1.9e-06 Score=89.40 Aligned_cols=38 Identities=13% Similarity=0.181 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCcEEEEccCCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYG 58 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~-~G~~V~vlE~~~~~G 58 (431)
.++||+|||||++||++|+.|++ .|.+|+|+||++.++
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46899999999999999999999 999999999998765
No 157
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.20 E-value=1.3e-06 Score=83.42 Aligned_cols=39 Identities=21% Similarity=0.126 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
+||+|||||++|+.||..|+++|++|+++|++...+.-.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~ 40 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPA 40 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcc
Confidence 699999999999999999999999999999987554443
No 158
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.20 E-value=8.8e-07 Score=86.00 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=33.8
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~G 58 (431)
.||+|||||++||++|..|+++ |++|+|+|+++.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~ 38 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQE 38 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCC
Confidence 3899999999999999999999 99999999998873
No 159
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.18 E-value=5.4e-07 Score=90.84 Aligned_cols=51 Identities=10% Similarity=0.121 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 280 ~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
++.+.+.+.+++.|.+|+++++|++|..+ +++ +.|++.+|+++.||.||+.
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vv~a 274 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT--GAG-VLVTMTDGRTVEGSHALMT 274 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC--SSS-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCE-EEEEECCCcEEEcCEEEEC
Confidence 67788888889999999999999999865 444 4677788999999999953
No 160
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.18 E-value=1.2e-06 Score=82.34 Aligned_cols=39 Identities=15% Similarity=0.382 Sum_probs=35.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCccc
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (431)
+|||+|||||++||+||..|++.|++|+|+|+ ++||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 48999999999999999999999999999986 5788765
No 161
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.17 E-value=1.2e-06 Score=89.46 Aligned_cols=39 Identities=28% Similarity=0.357 Sum_probs=35.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC-CCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYGS 59 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~-~~GG 59 (431)
.+|||||||||++|+.||..|++.|.+|+|+|++. .+|+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ 65 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC
Confidence 46999999999999999999999999999999984 5553
No 162
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=8.5e-07 Score=89.40 Aligned_cols=53 Identities=9% Similarity=0.017 Sum_probs=43.3
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcE-EEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD-ILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~-i~Ad~VI~~ 333 (431)
.++++.+.+.+++.|.++++++.|++|..+ ++..+.|++++|++ +.||.||+.
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~D~vi~a 270 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKV--SDKNLSIHLSDGRIYEHFDHVIYC 270 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES--STTCEEEEETTSCEEEEESEEEEC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEc--CCceEEEEECCCcEEEECCEEEEC
Confidence 467788888889999999999999999764 32225678889988 999999964
No 163
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.17 E-value=9.3e-07 Score=90.55 Aligned_cols=38 Identities=34% Similarity=0.497 Sum_probs=34.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC-CCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYG 58 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~-~~G 58 (431)
.+|||||||||++|+.||..|++.|.+|+|+|++. .+|
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 46999999999999999999999999999999984 454
No 164
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.16 E-value=7.1e-07 Score=91.86 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=42.8
Q ss_pred chHHHHHHHHHHhcC-cEEEeCcceeEEEEecCCCcEEEEEe---CCCc--EEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~--~i~Ad~VI~ 332 (431)
..|.++|.+.+...| .+|++++.|.+|..+ +++++||.+ .+|+ +++|+.||.
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 191 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRANAVVM 191 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478888888888888 999999999999987 788878753 5676 689999884
No 165
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.15 E-value=1.2e-06 Score=87.42 Aligned_cols=41 Identities=29% Similarity=0.310 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-----CcEEEEccCCCCCCcc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASG-----KSVLHLDPNPFYGSHF 61 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G-----~~V~vlE~~~~~GG~~ 61 (431)
..+||||||||++||+||..|++.| .+|+|+|+++.+|...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 4689999999999999999999999 9999999999998544
No 166
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.14 E-value=1.1e-06 Score=89.06 Aligned_cols=53 Identities=8% Similarity=0.002 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
-.++++.+.+..+..|.++++++.|+++... ++. +.|++.+++++.+|.|++.
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~--~~~-~~v~~~~~~~~~~D~vLvA 314 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKM--DDK-ILVEFSDKTSELYDTVLYA 314 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEec--CCe-EEEEEcCCCeEEEEEEEEc
Confidence 3578889999999999999999999999876 554 4677889999999999853
No 167
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.14 E-value=1.7e-06 Score=86.49 Aligned_cols=51 Identities=22% Similarity=0.160 Sum_probs=40.3
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeC-CCcEEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SGQDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~-~G~~i~Ad~VI~ 332 (431)
.++.++|.+.++..|.+|+.+++| +|..+ +++++||.+. ++.++.||.||+
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~--~~~v~Gv~v~~~~g~~~a~~VVl 170 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK--DGKVTGFVTEKRGLVEDVDKLVL 170 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE--TTEEEEEEETTTEEECCCSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe--CCEEEEEEEEeCCCeEEeeeEEE
Confidence 477888888887889999999999 99877 7788787653 233578999884
No 168
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.13 E-value=1.2e-06 Score=90.88 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=41.6
Q ss_pred chHHHHHHHHHHhc-Cc-EEEeCcceeEEEEecCCC---cEEEEEe---CCCc--EEEeCEEEE
Q 014049 279 GELPQAFCRRAAVK-GC-LYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~-Gg-~i~l~~~V~~I~~~~~~g---~~~gV~~---~~G~--~i~Ad~VI~ 332 (431)
..+...|.+.++.. |. +|+.++.|.+|..+ ++ +++||.. .+|+ +++|+.||.
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~--~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 212 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKD--NNDPNAVAGAVGFSVREPKFYVFKAKAVIL 212 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEEC--TTCTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEc--CCccceeEEEEEEEecCCcEEEEEcCEEEE
Confidence 35677777777777 99 99999999999886 55 8888864 4666 589999884
No 169
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.13 E-value=1.8e-06 Score=74.24 Aligned_cols=33 Identities=30% Similarity=0.412 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
|||+|||||++|+.+|..|++.|.+|+++|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999987
No 170
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.11 E-value=1.1e-06 Score=95.32 Aligned_cols=42 Identities=29% Similarity=0.377 Sum_probs=40.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (431)
..+||||||+|.+||+||..|++.|++|+|+|+++++||.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 368999999999999999999999999999999999999887
No 171
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.10 E-value=1.6e-06 Score=87.94 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~-~G~~V~vlE~~~~ 56 (431)
+||+||||+|.+|+++|.+|++ .|++|+|||+...
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 6999999999999999999998 7899999999654
No 172
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.10 E-value=2e-06 Score=87.77 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CcEEEEccCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPF 56 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G-~~V~vlE~~~~ 56 (431)
.++||+||||||.+||++|.+|++.| .+|+|||+...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999998 79999999765
No 173
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.09 E-value=2.2e-06 Score=87.41 Aligned_cols=37 Identities=30% Similarity=0.442 Sum_probs=34.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
.+||+||||+|.+|+++|.+|+++|++|+|||+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4699999999999999999999999999999998754
No 174
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.06 E-value=2.1e-06 Score=87.15 Aligned_cols=52 Identities=10% Similarity=0.180 Sum_probs=42.9
Q ss_pred chHHHHHHHHHHh-cCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..+.+.|.+.++. .|++++.+ .|++|..+ +++.+++|++.+|++++||.||.
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~-~~g~~~~v~~~~g~~i~ad~vV~ 227 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINN-QHGDIEKLITKQNGEISGQLFID 227 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEEC-TTSCEEEEEESSSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEec-CCCcEEEEEECCCCEEEcCEEEE
Confidence 4677888888888 89999999 59999875 25666788888888899999994
No 175
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.05 E-value=3.1e-06 Score=86.29 Aligned_cols=52 Identities=25% Similarity=0.204 Sum_probs=44.6
Q ss_pred chHHHHHHHHHHhc-CcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..+.+.|.+.+++. |++++++ +|++|..+ +++.+++|++.+|++++||.||.
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~-~~g~~~~v~~~~G~~i~ad~vI~ 246 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRD-ANGNIESVRTATGRVFDADLFVD 246 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEEC-TTSCEEEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEc-CCCCEEEEEECCCCEEECCEEEE
Confidence 46888898888888 9999999 99999875 25667789988998999999994
No 176
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.05 E-value=1.7e-06 Score=86.02 Aligned_cols=42 Identities=14% Similarity=0.143 Sum_probs=38.9
Q ss_pred CcccEEEECCChhHHHHHHHHhh-C------CCcEEEEccCCCCCCccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASA-S------GKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~-~------G~~V~vlE~~~~~GG~~~ 62 (431)
..+||+|||||++|+.||..|++ . |++|+|+|+++.+||.++
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 45899999999999999999999 7 999999999999999764
No 177
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.05 E-value=3.2e-06 Score=86.31 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=34.2
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhC-CCcEEEEccCC
Q 014049 18 IEPTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (431)
Q Consensus 18 ~~~~~~DviIIGaGl~GL~aA~~La~~-G~~V~vlE~~~ 55 (431)
+...+||+||||||.+||++|.+|+.. |.+|+|||+..
T Consensus 15 ~~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 15 VSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred cCCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 345679999999999999999999974 89999999987
No 178
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.04 E-value=3.4e-06 Score=85.43 Aligned_cols=40 Identities=15% Similarity=0.372 Sum_probs=36.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (431)
..+||+|||||++|++||.+|+++|++|+++|+ ++||.+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 468999999999999999999999999999996 5788765
No 179
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.04 E-value=2.6e-06 Score=85.31 Aligned_cols=51 Identities=8% Similarity=0.090 Sum_probs=40.9
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.++.+.+.+.++..|.+++++++|++|.. ++++..|.+ +++++.||.||+.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~D~vi~a 277 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKG---NERVEAVET-DKGTYKADLVLVS 277 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE---SSBEEEEEE-TTEEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEc---CCcEEEEEE-CCCEEEcCEEEEC
Confidence 46778888888999999999999999974 355666776 4568999999853
No 180
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.02 E-value=2.4e-06 Score=86.80 Aligned_cols=39 Identities=21% Similarity=0.354 Sum_probs=35.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
.+||+||||+|.+|+++|.+|++ |.+|+|||+....++.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~~ 63 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTAY 63 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGGS
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCCC
Confidence 46999999999999999999999 9999999998876543
No 181
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.00 E-value=3.6e-06 Score=83.53 Aligned_cols=41 Identities=10% Similarity=0.119 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCCCcc
Q 014049 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~GG~~ 61 (431)
+++||||||||++||+||..|++. |++|+|+|+++++|+..
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~ 44 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP 44 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC
Confidence 457999999999999999999998 88999999999887644
No 182
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.99 E-value=3e-06 Score=84.68 Aligned_cols=53 Identities=11% Similarity=0.127 Sum_probs=44.8
Q ss_pred cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
..++.+.+.+.+++.|.+++++++|++|..+ ++++. |++++|+++.||.||+.
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~-v~~~~g~~i~aD~Vv~a 253 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE--NGKVA-RVITDKRTLDADLVILA 253 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEE-EEEESSCEEECSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc--CCeEE-EEEeCCCEEEcCEEEEC
Confidence 4578888989999999999999999999875 56644 77789999999999964
No 183
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.99 E-value=2.5e-06 Score=86.14 Aligned_cols=52 Identities=21% Similarity=0.225 Sum_probs=44.4
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..+.+.|.+.++..|++++.+ +|++|..+ +++.+++|++.+|++++||.||.
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~-~~~~~~~v~~~~g~~~~ad~vV~ 224 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQD-ERGWISGVHTKQHGEISGDLFVD 224 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEEC-TTSCEEEEEESSSCEEECSEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEc-CCCCEEEEEECCCCEEEcCEEEE
Confidence 467888888888899999999 99999875 25667789988998999999994
No 184
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.98 E-value=3.7e-06 Score=87.60 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=38.3
Q ss_pred CcccEEEECCChhHHHHHHHHhh-----CCCcEEEEccCCCC--CCcccccC
Q 014049 21 TAFDLIVIGTGLPESVISAAASA-----SGKSVLHLDPNPFY--GSHFSSLS 65 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~-----~G~~V~vlE~~~~~--GG~~~t~~ 65 (431)
.++||+|||||++||++|+.|++ .|.+|+|+||++.. .|++..+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~ 58 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQ 58 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEC
Confidence 36899999999999999999999 99999999998764 45554443
No 185
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.98 E-value=3.8e-06 Score=86.56 Aligned_cols=35 Identities=31% Similarity=0.334 Sum_probs=32.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (431)
...|||+|||||.+||+||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34699999999999999999999999999999983
No 186
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.97 E-value=4.2e-06 Score=86.06 Aligned_cols=50 Identities=24% Similarity=0.195 Sum_probs=42.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.++.+.+.+.+++.|.+++++++|++|..+ ++ +|++++|+++.||.||+.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~---~v~~~~g~~i~~D~Vi~a 277 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN--GA---VVRLKSGSVIQTDMLILA 277 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG--GT---EEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC--CC---EEEECCCCEEEcCEEEEc
Confidence 467888888889999999999999999654 33 477789999999999964
No 187
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.97 E-value=4.5e-06 Score=91.18 Aligned_cols=41 Identities=10% Similarity=0.200 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCCCCCCcc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHF 61 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~~GG~~ 61 (431)
..+||+|||||.+||+||..|+++|+ +|+|+|+++++||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46899999999999999999999999 799999999999975
No 188
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.95 E-value=4e-06 Score=83.48 Aligned_cols=42 Identities=10% Similarity=-0.034 Sum_probs=38.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CcEEEEccCCCCCCccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G--~~V~vlE~~~~~GG~~~ 62 (431)
..+||+|||+|++|+.||..|++.| ++|+|+|+++++||+++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3479999999999999999999999 99999999999998764
No 189
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.92 E-value=7.3e-06 Score=82.59 Aligned_cols=39 Identities=23% Similarity=0.335 Sum_probs=35.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
+.+||+||||+|.+|+++|.+|+++|++|+|+|+....+
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 457999999999999999999999999999999998765
No 190
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.88 E-value=7.1e-06 Score=81.52 Aligned_cols=52 Identities=6% Similarity=0.137 Sum_probs=43.0
Q ss_pred cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
-.++++.+.+.+++.|.+++++++|++|..+ ++++ .|++++| ++.||.||+.
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g-~i~aD~Vv~A 239 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEET--ANGI-VLETSEQ-EISCDSGIFA 239 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEEC--SSCE-EEEESSC-EEEESEEEEC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc--CCeE-EEEECCC-EEEeCEEEEC
Confidence 3577888888889999999999999999865 5665 7887666 8999999953
No 191
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.87 E-value=6.6e-06 Score=81.17 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=36.5
Q ss_pred ccEEEECCChhHHHHHHHHhh--CCCcEEEEccCCCCCCcc
Q 014049 23 FDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~--~G~~V~vlE~~~~~GG~~ 61 (431)
.||||||||++||+||..|++ .|++|+|+|++++.|+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 599999999999999999999 899999999999988754
No 192
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.85 E-value=1.2e-05 Score=79.28 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=45.5
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEE--ecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLT--DQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~--~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.++.+.+.+.+++.|.+++++++|++|.. + ++++.+|++++|+++.||.||+.
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~~~v~~v~~~~G~~i~~D~Vv~a 245 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTD--QQKVTAVLCEDGTRLPADLVIAG 245 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTT--TCCEEEEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccC--CCcEEEEEeCCCCEEEcCEEEEC
Confidence 46778888888999999999999999976 4 56777888999999999999964
No 193
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.84 E-value=9.4e-06 Score=80.60 Aligned_cols=53 Identities=19% Similarity=0.205 Sum_probs=44.2
Q ss_pred cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
..++.+.+.+.+++.|.+++++++|++|..+ ++++..|.+ +|+++.||.||+.
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~~-~g~~i~~D~vv~a 242 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKTL-DGKEIKSDIAILC 242 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEET-TSCEEEESEEEEC
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEEe-CCCEEECCEEEEC
Confidence 3578888888899999999999999999865 566666765 7889999999953
No 194
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.83 E-value=8.8e-06 Score=82.87 Aligned_cols=38 Identities=29% Similarity=0.426 Sum_probs=35.0
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCcEEEEccCCCCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGS 59 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~-~G~~V~vlE~~~~~GG 59 (431)
+||+||||+|.+|+++|.+|++ .|++|+|||+....++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~ 40 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDEN 40 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccC
Confidence 5999999999999999999999 7999999999987744
No 195
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.82 E-value=1.7e-05 Score=80.02 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
..+||+||||+|.+|+++|.+|+++|++|+|||+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 35799999999999999999999999999999998754
No 196
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.81 E-value=7e-06 Score=80.36 Aligned_cols=50 Identities=14% Similarity=0.090 Sum_probs=41.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEECCC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p~ 335 (431)
..+.+.+.+.+++.|.+++++++|++|.. + +|++++|+++.||.||+.+.
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~----~---~v~~~~g~~~~~D~vi~a~G 267 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE----H---EIVDEKGNTIPADITILLPP 267 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS----S---EEEETTSCEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC----C---eEEECCCCEEeeeEEEECCC
Confidence 46778888888999999999999999842 2 36778999999999986443
No 197
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.81 E-value=1.3e-05 Score=77.75 Aligned_cols=52 Identities=17% Similarity=0.091 Sum_probs=43.8
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
..+.+.+.+.++..|.+++++++|++|..+ ++. +.|++++|+++.||.||+.
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~g~~i~~d~vv~a 238 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA--GEG-LEAHLSDGEVIPCDLVVSA 238 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec--CCE-EEEEECCCCEEECCEEEEC
Confidence 467788888888999999999999999875 443 5788889999999999964
No 198
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.77 E-value=1.5e-05 Score=79.96 Aligned_cols=52 Identities=17% Similarity=0.171 Sum_probs=43.8
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
..+.+.+.+.+++.|.++++++.|++|..+ +++ +.|++++|+++.||.||+.
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~--~~~-~~v~l~dG~~i~aD~Vv~a 277 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVS--SGK-LLIKLKDGRKVETDHIVAA 277 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEec--CCe-EEEEECCCCEEECCEEEEC
Confidence 357788888889999999999999999865 454 4788899999999999964
No 199
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.77 E-value=1.3e-05 Score=80.49 Aligned_cols=51 Identities=10% Similarity=0.155 Sum_probs=41.3
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.++.+.+.+.+++.|.++++++.|++|.. ++++..|++ +|+++.||.||+.
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~v~~v~~-~g~~i~~D~Vi~a 286 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG---NGKVEKIIT-DKNEYDVDMVILA 286 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC---SSSCCEEEE-SSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc---CCcEEEEEE-CCcEEECCEEEEC
Confidence 46778888888999999999999999974 445555665 7889999999854
No 200
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.77 E-value=2e-05 Score=80.16 Aligned_cols=39 Identities=28% Similarity=0.398 Sum_probs=35.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCcEEEEccCCCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGS 59 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~-G~~V~vlE~~~~~GG 59 (431)
..||+||||+|.+|+++|.+|+++ |++|+|||+.....+
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~ 51 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRG 51 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCC
Confidence 469999999999999999999998 999999999987644
No 201
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.76 E-value=1.5e-05 Score=79.03 Aligned_cols=51 Identities=10% Similarity=0.038 Sum_probs=40.7
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.++.+.+.+.+++.|.+++++++|++|.. +++++.|.+ +|+++.||.||+.
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~d~vi~a 241 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEG---DGRVQKVVT-DKNAYDADLVVVA 241 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEEC---SSBCCEEEE-SSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEc---cCcEEEEEE-CCCEEECCEEEEC
Confidence 46778888888899999999999999974 344446665 6778999999853
No 202
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.75 E-value=2e-05 Score=80.76 Aligned_cols=38 Identities=21% Similarity=0.366 Sum_probs=35.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-CCCcEEEEccCCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFY 57 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~-~G~~V~vlE~~~~~ 57 (431)
+.+||+||||+|.+|+++|.+|++ .|++|+|||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 457999999999999999999999 89999999998765
No 203
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.73 E-value=2e-05 Score=77.18 Aligned_cols=49 Identities=22% Similarity=0.243 Sum_probs=41.1
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEECC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~p 334 (431)
.++.+.+.+.+++.|.+++++++|++|. + + +|++++|+++.||.||+..
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~----~v~~~~g~~i~~D~vi~a~ 235 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV-D--G----VVLLDDGTRIAADMVVVGI 235 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T----EEEETTSCEEECSEEEECS
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C----EEEECCCCEEEcCEEEECc
Confidence 3577888888899999999999999996 3 3 5777899999999999643
No 204
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.68 E-value=2.4e-05 Score=77.25 Aligned_cols=36 Identities=17% Similarity=0.382 Sum_probs=33.8
Q ss_pred cccEEEECCChhHHHHHHHHhh---CCCcEEEEccCCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~---~G~~V~vlE~~~~~ 57 (431)
+.||||||||++|++||..|++ .|++|+|+|++++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4699999999999999999999 89999999999965
No 205
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.67 E-value=2.8e-05 Score=74.99 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 280 ~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
++.+.+.+.+++.|.+++++++|++|. .+ +|++++|+ +.||.||..
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~----~~---~v~~~~g~-i~~D~vi~a 229 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEAN----EE---GVLTNSGF-IEGKVKICA 229 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEEC----SS---EEEETTEE-EECSCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEE----ee---EEEECCCE-EEcCEEEEC
Confidence 677888888899999999999999985 22 46778888 999998853
No 206
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.64 E-value=3.7e-05 Score=75.26 Aligned_cols=52 Identities=12% Similarity=0.145 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.++.+.+.+.+++.|.++++++.|++|..+ +++.+|++++|+++.||.||+.
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~~~v~~~dg~~i~aD~Vv~a 236 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE---GQLEQVMASDGRSFVADSALIC 236 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS---SSCCEEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc---CcEEEEEECCCCEEEcCEEEEe
Confidence 467788888888999999999999999753 3556899999999999999964
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.64 E-value=2.9e-05 Score=79.31 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~G 58 (431)
.||+|||||++||+||..|++. |++|+|+|+++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 5899999999999999999998 89999999999987
No 208
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.52 E-value=2.4e-05 Score=78.77 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=31.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~ 62 (431)
.+.|||||||+|.+||++|+.|.++|...+++|+.+..|+...
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~ 79 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKI 79 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCE
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcce
Confidence 3469999999999999999999998776666666666665443
No 209
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.38 E-value=9.3e-05 Score=74.36 Aligned_cols=36 Identities=11% Similarity=0.277 Sum_probs=33.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
++..|||||||.+|+.+|..|++.|++|+|+|++++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 456899999999999999999999999999999975
No 210
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.35 E-value=0.00015 Score=70.33 Aligned_cols=39 Identities=10% Similarity=0.243 Sum_probs=35.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
+...|+|||||++|++||..|++.|.+|+|+|++++++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 356899999999999999999889999999999999874
No 211
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.33 E-value=0.00011 Score=71.41 Aligned_cols=39 Identities=18% Similarity=0.329 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--cEEEEccCCCCCCcc
Q 014049 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHF 61 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~--~V~vlE~~~~~GG~~ 61 (431)
..|||||||.+|++||.+|++.|. +|+|+|++++...+.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p 43 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY 43 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc
Confidence 369999999999999999998874 899999998765443
No 212
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.29 E-value=0.00015 Score=71.56 Aligned_cols=49 Identities=10% Similarity=0.140 Sum_probs=40.4
Q ss_pred cchHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 278 ~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
-.++.+.+.+..++.|.++++++.|+++. .+ .|++++|+++.||.||..
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~----~~---~v~~~~g~~~~~D~vl~a 235 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAIN----GN---EITFKSGKVEHYDMIIEG 235 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEE----TT---EEEETTSCEEECSEEEEC
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEec----CC---eeeecCCeEEeeeeEEEE
Confidence 35677888888899999999999999883 33 366789999999999853
No 213
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.12 E-value=0.00023 Score=69.98 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=31.2
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CcEEEEccCCCC
Q 014049 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNPFY 57 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G--~~V~vlE~~~~~ 57 (431)
.|||||||++|++||..|++.| .+|+|+|++++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 6999999999999999999876 789999999863
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.32 E-value=0.0033 Score=61.98 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=36.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
..+++|||+|..|+.+|..|++.|.+|+++|+++++..+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc
Confidence 468999999999999999999999999999999987664
No 215
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.30 E-value=0.0031 Score=60.91 Aligned_cols=39 Identities=15% Similarity=0.003 Sum_probs=36.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+++..+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~ 185 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQ 185 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh
Confidence 479999999999999999999999999999999987653
No 216
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.28 E-value=0.0057 Score=49.80 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
-.|+|||.|--|...|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999975
No 217
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.18 E-value=0.0049 Score=51.13 Aligned_cols=34 Identities=35% Similarity=0.488 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
...|+|||+|.-|+..|..|++.|++|+++|++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999874
No 218
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.10 E-value=0.0055 Score=49.44 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|+|||+|..|...|..|++.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999854
No 219
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.00 E-value=0.0053 Score=57.13 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~ 182 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRA 182 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCc
Confidence 3799999999999999999999999999999988643
No 220
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.93 E-value=0.0088 Score=49.42 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
...++|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3579999999999999999999999999999973
No 221
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.85 E-value=0.0062 Score=60.25 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999999875
No 222
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.84 E-value=0.0079 Score=57.91 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=35.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
.+++|||+|..|+.+|..|++.|.+|+++|+++++..+.
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~ 184 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL 184 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc
Confidence 579999999999999999999999999999999877653
No 223
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.83 E-value=0.0091 Score=48.49 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..++|+|+|.-|...|..|+++|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999863
No 224
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.77 E-value=0.0078 Score=59.62 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
.+++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999998765
No 225
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.70 E-value=0.0085 Score=59.16 Aligned_cols=37 Identities=27% Similarity=0.198 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5899999999999999999999999999999998765
No 226
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.70 E-value=0.0087 Score=59.09 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+.+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 204 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999988654
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.69 E-value=0.0084 Score=57.42 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
.+++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 4799999999999999999999999999999998766
No 228
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.67 E-value=0.0096 Score=59.15 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=35.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
..++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 221 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc
Confidence 47999999999999999999999999999999998763
No 229
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.63 E-value=0.011 Score=50.38 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=31.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCcEEEEccCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~-G~~V~vlE~~~ 55 (431)
..-.|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 345799999999999999999999 99999999875
No 230
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.50 E-value=0.012 Score=55.03 Aligned_cols=50 Identities=10% Similarity=0.016 Sum_probs=32.9
Q ss_pred CccCCCCCCCCCC-CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 7 ESELPVPPYPPIE-PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
.++|+.+++.+-. .....|.|||+|.-|...|..|+++|++|++++++..
T Consensus 5 ~~~~~~~~~~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 5 HHHHHHSSGLVPRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp -------------CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccccccccccCcccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3556665554433 2346899999999999999999999999999998764
No 231
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.49 E-value=0.022 Score=54.49 Aligned_cols=50 Identities=16% Similarity=0.172 Sum_probs=37.5
Q ss_pred CCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 10 LPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 10 ~~~~~~~~~~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
.|+.+-++-.+.++||||||||++||++|+.|+++|++|+|+|+++..+|
T Consensus 5 ~~~~~~~~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 5 HHHMARIRAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp ---------CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred hhhHHHhhccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 34555555566679999999999999999999999999999999976555
No 232
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.47 E-value=0.014 Score=45.32 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G-~~V~vlE~~~ 55 (431)
..|+|+|+|..|...+..|.+.| ++|.+++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 9999999863
No 233
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.46 E-value=0.013 Score=56.89 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=35.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 57999999999999999999999999999999987664
No 234
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.44 E-value=0.012 Score=57.94 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..++|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 204 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP 204 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh
Confidence 4799999999999999999999999999999988754
No 235
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.42 E-value=0.012 Score=54.65 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 47999999999999999999999999999987653
No 236
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.35 E-value=0.016 Score=53.27 Aligned_cols=36 Identities=28% Similarity=0.276 Sum_probs=32.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
+...|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 335799999999999999999999999999998753
No 237
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.19 E-value=0.016 Score=57.28 Aligned_cols=37 Identities=14% Similarity=0.068 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~ 203 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc
Confidence 4799999999999999999999999999999988754
No 238
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.07 E-value=0.012 Score=58.47 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 5799999999999999999999999999999988766
No 239
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.01 E-value=0.02 Score=53.42 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
-.|.|||||.-|..-|..++.+|++|+++|.++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4699999999999999999999999999998753
No 240
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.00 E-value=0.02 Score=54.50 Aligned_cols=39 Identities=15% Similarity=0.157 Sum_probs=32.2
Q ss_pred CCCCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 17 PIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 17 ~~~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
++|++...|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 17 ~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 17 NLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 456666789999999999999999999999999999874
No 241
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.98 E-value=0.024 Score=55.31 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=31.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.+..+.|||.|..||..|+.|+++|++|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 34579999999999999999999999999999874
No 242
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.97 E-value=0.02 Score=57.08 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 4799999999999999999999999999999998765
No 243
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.96 E-value=0.025 Score=52.53 Aligned_cols=33 Identities=33% Similarity=0.477 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999874
No 244
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.96 E-value=0.022 Score=56.45 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 4799999999999999999999999999999998765
No 245
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=94.90 E-value=0.022 Score=56.30 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999998765
No 246
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=94.90 E-value=0.025 Score=56.46 Aligned_cols=38 Identities=18% Similarity=0.112 Sum_probs=35.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 57999999999999999999999999999999998654
No 247
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=94.88 E-value=0.065 Score=51.46 Aligned_cols=38 Identities=24% Similarity=0.502 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
.++||||||||++||++|+.|+++|++|+||||++..+
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 35899999999999999999999999999999998765
No 248
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.87 E-value=0.018 Score=57.19 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 4799999999999999999999999999999998764
No 249
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.86 E-value=0.029 Score=55.05 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
..|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4699999999999999999999999999999876
No 250
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.85 E-value=0.026 Score=53.16 Aligned_cols=38 Identities=13% Similarity=0.168 Sum_probs=33.1
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 014049 18 IEPTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (431)
Q Consensus 18 ~~~~~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (431)
+......|.|||||-.|.+.|..|+++|+ +|.++|.+.
T Consensus 5 ~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 33334689999999999999999999998 999999975
No 251
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.84 E-value=0.024 Score=55.07 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 181 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR 181 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh
Confidence 47999999999999999999999999999999987644
No 252
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.81 E-value=0.024 Score=45.78 Aligned_cols=33 Identities=30% Similarity=0.316 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|+|+|+|..|...|..|.+.|++|.++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 359999999999999999999999999999863
No 253
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=94.80 E-value=0.058 Score=51.23 Aligned_cols=42 Identities=31% Similarity=0.350 Sum_probs=37.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
++||||||||++||++|+.|+++|++|+|+|+++..+|...+
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~ 43 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSH 43 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCC
Confidence 489999999999999999999999999999999988765443
No 254
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.78 E-value=0.032 Score=56.37 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=32.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
...|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35799999999999999999999999999999876
No 255
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.78 E-value=0.027 Score=55.52 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
...|.|||.|.+|+++|..|++.|++|++.|+++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 35799999999999999999999999999999763
No 256
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.73 E-value=0.028 Score=55.24 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=34.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
+++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 8999999999999999999999999999999987665
No 257
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.72 E-value=0.036 Score=54.75 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 258
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.71 E-value=0.028 Score=50.42 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=31.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 19 ~~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
......|.|||+|.-|...|..|+++|++|++++++.
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3445679999999999999999999999999999874
No 259
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=94.68 E-value=0.077 Score=46.96 Aligned_cols=51 Identities=18% Similarity=0.064 Sum_probs=42.1
Q ss_pred chHHHHHHHHHHhc-CcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..+.+.|.+.++.. |.+++ +++|++|..+ ++++++|++.+|++++||.||.
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~--~~~v~~v~~~~g~~i~a~~VV~ 119 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLE--GNRVVGVRTWEGPPARGEKVVL 119 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE--TTEEEEEEETTSCCEECSEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe--CCEEEEEEECCCCEEECCEEEE
Confidence 36667777878876 88887 6899999887 6777789888998999999995
No 260
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.63 E-value=0.019 Score=56.74 Aligned_cols=37 Identities=19% Similarity=0.154 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 4799999999999999999999999999999998765
No 261
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.63 E-value=0.026 Score=53.60 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
..|+|||+|.+|+-+|..|++.|.+|+++|+++.+.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~ 202 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLN 202 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCC
Confidence 379999999999999999999999999999988765
No 262
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.58 E-value=0.03 Score=51.78 Aligned_cols=36 Identities=14% Similarity=0.083 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
..|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 179 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR 179 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC
Confidence 579999999999999999999999999999998873
No 263
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.58 E-value=0.029 Score=55.72 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 222 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR 222 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc
Confidence 4799999999999999999999999999999998754
No 264
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.55 E-value=0.026 Score=49.54 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.|+|||+|--|...|..|.++|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 58999999999999999999999999999864
No 265
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.54 E-value=0.033 Score=52.97 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=31.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
....|.|||+|.-|.+.|..|+++|++|.++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34689999999999999999999999999999864
No 266
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.53 E-value=0.03 Score=55.60 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
...|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 267
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.51 E-value=0.031 Score=53.02 Aligned_cols=34 Identities=26% Similarity=0.310 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
...|.|||+|..|...|..|+++|++|++++++.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999863
No 268
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.49 E-value=0.031 Score=55.89 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc
Confidence 4799999999999999999999999999999998764
No 269
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.46 E-value=0.037 Score=53.54 Aligned_cols=39 Identities=26% Similarity=0.285 Sum_probs=35.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~ 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc
Confidence 469999999999999999999999999999999886654
No 270
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.44 E-value=0.034 Score=52.02 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
..|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4699999999999999999999999999998753
No 271
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.36 E-value=0.043 Score=47.89 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=31.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
..|.|||+|.-|.+.|..|+++|++|.+++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4699999999999999999999999999998876
No 272
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.35 E-value=0.034 Score=51.37 Aligned_cols=35 Identities=20% Similarity=0.120 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
..|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 47999999999999999999999999999999887
No 273
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.34 E-value=0.037 Score=54.73 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR 213 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC
Confidence 4799999999999999999999999999999988654
No 274
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.34 E-value=0.03 Score=54.90 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=35.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
.++|||+|..|+-.|..|++.|.+|+++|+.+++....
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~ 186 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM 186 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc
Confidence 79999999999999999999999999999999876543
No 275
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.34 E-value=0.038 Score=55.83 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=33.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
...|+|||+|.+|+-+|..|++.|.+|+|+++.+++
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 457999999999999999999999999999998763
No 276
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.30 E-value=0.042 Score=53.39 Aligned_cols=39 Identities=23% Similarity=0.203 Sum_probs=35.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~ 191 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV 191 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh
Confidence 469999999999999999999999999999999886543
No 277
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.29 E-value=0.038 Score=54.67 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..++|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999998765
No 278
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.26 E-value=0.038 Score=51.78 Aligned_cols=40 Identities=15% Similarity=0.265 Sum_probs=31.8
Q ss_pred CCCCCCcccEEEECCChhHHHHHHHHhhCC----CcEEEEccCC
Q 014049 16 PPIEPTAFDLIVIGTGLPESVISAAASASG----KSVLHLDPNP 55 (431)
Q Consensus 16 ~~~~~~~~DviIIGaGl~GL~aA~~La~~G----~~V~vlE~~~ 55 (431)
|+++++...|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 16 ~~~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 16 ENLYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp ------CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred chhccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 456666678999999999999999999999 8999999875
No 279
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.26 E-value=0.039 Score=51.99 Aligned_cols=32 Identities=16% Similarity=0.311 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (431)
..|.|||+|--|.+.|..|+++|++|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999975
No 280
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.22 E-value=0.037 Score=54.69 Aligned_cols=37 Identities=11% Similarity=0.037 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|.+|+-.|..|++.|.+|+++++++.+-+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~ 234 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMG 234 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCC
Confidence 4799999999999999999999999999999877533
No 281
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=94.22 E-value=0.073 Score=50.93 Aligned_cols=52 Identities=13% Similarity=0.311 Sum_probs=43.5
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEe---CCCcEEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~---~~G~~i~Ad~VI~ 332 (431)
..+.+.|.+.++..|++|+++++|++|..+ ++++++|++ .++++++||.||.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHNNEIVDVRAKMVIA 156 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe--CCEEEEEEEEECCeEEEEEcCEEEE
Confidence 467788888888899999999999999987 777777877 3566899999884
No 282
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=94.18 E-value=0.088 Score=50.24 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=35.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
++||||||||++|+++|+.|+++|++|+|+|+++..+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 5899999999999999999999999999999998766
No 283
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.15 E-value=0.043 Score=51.33 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|--|.+.|..|+++|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 469999999999999999999999999999975
No 284
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.14 E-value=0.11 Score=50.68 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=34.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--cEEEEccCCCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYG 58 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~--~V~vlE~~~~~G 58 (431)
.+||||||||++|++||..|++.|+ +|+++|+++..+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 42 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP 42 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC
Confidence 5899999999999999999999999 799999998765
No 285
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.14 E-value=0.04 Score=51.46 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
..|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~ 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC
Confidence 479999999999999999999999999999998763
No 286
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.13 E-value=0.047 Score=50.00 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
.|.|||+|..|...|..|+++|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998764
No 287
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.10 E-value=0.041 Score=55.63 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=33.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
...|+|||+|.+|+-+|..|++.|.+|+|+++.+++
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 457999999999999999999999999999998763
No 288
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.08 E-value=0.046 Score=50.72 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
...|.|||+|.-|...|..|+++|++|++++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 289
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.07 E-value=0.043 Score=51.13 Aligned_cols=36 Identities=14% Similarity=0.065 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
..|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC
Confidence 479999999999999999999999999999998764
No 290
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.07 E-value=0.047 Score=53.56 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=32.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
...+.|||+|.-|+..|..|+++|++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46789999999999999999999999999999875
No 291
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.06 E-value=0.044 Score=51.09 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|--|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 469999999999999999999999999999875
No 292
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.06 E-value=0.042 Score=50.95 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
..|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc
Confidence 479999999999999999999999999999998763
No 293
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.05 E-value=0.045 Score=50.76 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 369999999999999999999999999999864
No 294
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.02 E-value=0.043 Score=51.41 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
..|+|||+|..|+-.|..|++.|.+|+++++++++.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~ 191 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC
Confidence 579999999999999999999999999999998763
No 295
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.98 E-value=0.036 Score=54.36 Aligned_cols=37 Identities=19% Similarity=0.142 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|.|||.|.+|+++|..|+++|++|++.|++...=|
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~ 42 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG 42 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch
Confidence 4699999999999999999999999999999876533
No 296
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.97 E-value=0.053 Score=53.61 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhhC-CC-cEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASAS-GK-SVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~-G~-~V~vlE~~~~ 56 (431)
..|.|||+|.-|+..|..|+++ |+ +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4799999999999999999999 99 9999999876
No 297
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.94 E-value=0.046 Score=53.64 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=32.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCc-EEEEccCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFY 57 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~-V~vlE~~~~~ 57 (431)
.+|+|||+|.+|+-.|..|++.|.+ |+++++.+.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999998876
No 298
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.91 E-value=0.043 Score=51.30 Aligned_cols=37 Identities=8% Similarity=0.211 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~ 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc
Confidence 4799999999999999999999999999999987654
No 299
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.89 E-value=0.048 Score=55.28 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=33.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 799999999999999999999999999999987654
No 300
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=93.88 E-value=0.048 Score=54.28 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
..|+|||+|..|+-.|..|++.|.+|+++|+.+++...
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 236 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG 236 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc
Confidence 47999999999999999999999999999999987653
No 301
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.87 E-value=0.048 Score=53.60 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 379999999999999999999999999999875
No 302
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.81 E-value=0.05 Score=50.28 Aligned_cols=35 Identities=17% Similarity=0.045 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
...|.|||.|.-|...|..|+++|++|++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45799999999999999999999999999998875
No 303
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=93.76 E-value=0.083 Score=52.16 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=35.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
..++|||+|..|+-+|..|++.|.+|+++|+.+++....
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~ 211 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL 211 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC
Confidence 479999999999999999999999999999999876543
No 304
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=93.76 E-value=0.16 Score=50.65 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~---~G~~V~vlE~~~~ 56 (431)
+||||||||++|+++|+.|++ +|.+|+|+|+.+.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 799999999999999999999 9999999999864
No 305
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=93.76 E-value=0.13 Score=50.52 Aligned_cols=37 Identities=27% Similarity=0.541 Sum_probs=34.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
.++||||||||++||+||..|+++|++|+|+|+++.+
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 4689999999999999999999999999999999864
No 306
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=93.76 E-value=0.14 Score=51.61 Aligned_cols=37 Identities=8% Similarity=0.146 Sum_probs=34.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhh---CCCcEEEEccCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~---~G~~V~vlE~~~~ 56 (431)
+..+||||||||++|+++|+.|++ +|.+|+|+|+.+.
T Consensus 23 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 23 GKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 346899999999999999999999 9999999999764
No 307
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.72 E-value=0.056 Score=53.55 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..++|||+|..|+-.|..|++.|.+|+++++.+++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 224 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR 224 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc
Confidence 5799999999999999999999999999999988653
No 308
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.66 E-value=0.065 Score=47.21 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=31.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (431)
.+...|+|||+|-.|...|..|.++|.+|+|++.+
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 44578999999999999999999999999999874
No 309
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.64 E-value=0.048 Score=50.85 Aligned_cols=49 Identities=20% Similarity=0.116 Sum_probs=31.0
Q ss_pred CccCCCCC-CCCCC-CCcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 014049 7 ESELPVPP-YPPIE-PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (431)
Q Consensus 7 ~~~~~~~~-~~~~~-~~~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (431)
|+-|+.+. ++.++ +....|.|||+|.-|...|..|+++|+ +|++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 7 HSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp ------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred cccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 45565432 33332 224579999999999999999999999 999999973
No 310
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.62 E-value=0.088 Score=48.67 Aligned_cols=48 Identities=19% Similarity=0.267 Sum_probs=34.2
Q ss_pred CCCCccCCCCCCCCCCCCcccEEEEC-CChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 4 NESESELPVPPYPPIEPTAFDLIVIG-TGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~DviIIG-aGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
++.+.+|... .| + ...|.||| +|.-|.+.|..|+++|++|.+++++..
T Consensus 8 ~~~~~~~~~~-~~-~---~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 8 NENQFGFKTI-NS-D---IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp -----CCCCS-CT-T---CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred hhhccCcccc-CC-C---CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 4555667422 12 1 23699999 999999999999999999999998754
No 311
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.61 E-value=0.054 Score=50.30 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
..|+|||+|..|+-.|..|++.|.+|+++++.+++.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~ 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC
Confidence 479999999999999999999999999999988764
No 312
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=93.58 E-value=0.14 Score=52.03 Aligned_cols=40 Identities=25% Similarity=0.419 Sum_probs=36.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
.++||||||||++|+++|+.|+++|++|+|+|+++..+|.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~Gt 70 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGT 70 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 4689999999999999999999999999999999876663
No 313
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=93.53 E-value=0.044 Score=53.94 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=32.9
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~ 57 (431)
...|+|||+|.+|+-+|..|++. |.+|+++++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 45899999999999999999999 9999999998764
No 314
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=93.53 E-value=0.12 Score=49.63 Aligned_cols=37 Identities=14% Similarity=0.297 Sum_probs=34.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
.++||+|||||++||++|..|+++|++|+|+|+++.+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 3589999999999999999999999999999998765
No 315
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.47 E-value=0.059 Score=52.81 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.|.|||+|..|+..|..|+++|++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999864
No 316
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.43 E-value=0.19 Score=50.04 Aligned_cols=44 Identities=32% Similarity=0.359 Sum_probs=39.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-CCCcEEEEc--------cCCCCCCcccc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~-~G~~V~vlE--------~~~~~GG~~~t 63 (431)
..+|||+|||||.+|++||..|++ .|++|+|+| +++.+||.|..
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~ 57 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVN 57 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHH
T ss_pred ccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeec
Confidence 346999999999999999999999 999999999 46789997754
No 317
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=93.42 E-value=0.18 Score=50.10 Aligned_cols=43 Identities=28% Similarity=0.333 Sum_probs=38.8
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCcEEEEc--------cCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~-~G~~V~vlE--------~~~~~GG~~~t 63 (431)
.+|||+|||||.+|++||..|++ .|++|+|+| +++.+||.|..
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~ 53 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVN 53 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccC
Confidence 46999999999999999999999 999999999 46789997654
No 318
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.42 E-value=0.068 Score=53.69 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=35.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
..++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc
Confidence 57999999999999999999999999999999987653
No 319
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.40 E-value=0.04 Score=48.54 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=31.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEE-EccCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNP 55 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~v-lE~~~ 55 (431)
|....|.|||+|.-|.+.|..|+++|++|++ ++++.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 3346899999999999999999999999998 87764
No 320
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.39 E-value=0.064 Score=49.97 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~ 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC
Confidence 4699999999999999999999999999999988754
No 321
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=93.39 E-value=0.16 Score=50.05 Aligned_cols=37 Identities=14% Similarity=0.048 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~G 58 (431)
++||+|||||++||+||..|++. |++|+|+|+++.+|
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 47999999999999999999999 99999999999976
No 322
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.38 E-value=0.07 Score=49.17 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
+..|.|||+|.-|..-|..|+ +|++|+++|++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 568999999999999999999 999999999875
No 323
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.36 E-value=0.072 Score=52.84 Aligned_cols=35 Identities=29% Similarity=0.342 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
...|.|||+|.-|...|..|+++|++|+++|++..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 34799999999999999999999999999998753
No 324
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=93.23 E-value=0.23 Score=48.64 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~GG 59 (431)
+||||||||.+|++||..|++. |++|+|+|+++.+|.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc
Confidence 5899999999999999999998 999999999997664
No 325
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.23 E-value=0.074 Score=47.03 Aligned_cols=34 Identities=15% Similarity=0.304 Sum_probs=30.9
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
...|+|.|| |.-|...|..|.++|++|.++.++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 457999998 9999999999999999999998864
No 326
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=93.20 E-value=0.071 Score=50.45 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=34.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+++++.+.+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~ 200 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG 200 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC
Confidence 4799999999999999999999999999999987654
No 327
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.20 E-value=0.075 Score=52.56 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc
Confidence 4799999999999999999999999999999998765
No 328
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=93.19 E-value=0.19 Score=51.16 Aligned_cols=53 Identities=19% Similarity=0.274 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCC------C---------cEEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------G---------QDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~------G---------~~i~Ad~VI~ 332 (431)
..+.+.|.+.+++.|++|+++++|++|..+ +++++++|++.+ | .+++||.||.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~-~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~ 211 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFH-EDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIF 211 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEC-TTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEE
Confidence 478888988888899999999999999886 246778888763 3 6899999994
No 329
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.19 E-value=0.075 Score=49.64 Aligned_cols=33 Identities=15% Similarity=0.413 Sum_probs=29.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
...|.|||+|--|.+.|..|+++|++|+++ ++.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 457999999999999999999999999999 654
No 330
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.18 E-value=0.17 Score=48.79 Aligned_cols=38 Identities=26% Similarity=0.392 Sum_probs=35.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
.++||||||||++||++|+.|+++|++|+|+|+++.++
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~ 41 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR 41 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 45999999999999999999999999999999997543
No 331
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.14 E-value=0.097 Score=48.71 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
..|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 5799999999999999999999999999998753
No 332
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.11 E-value=0.058 Score=49.76 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|--|.+.|..|+++|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 469999999999999999999999999999874
No 333
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.11 E-value=0.082 Score=50.84 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=31.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
-.|+|||+|..|+.+|..|...|.+|+++|++..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5799999999999999999999999999999864
No 334
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.09 E-value=0.077 Score=51.65 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
..|.|||+|.-|+..|..|++ |++|+++|++..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 579999999999999999998 999999998753
No 335
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.08 E-value=0.088 Score=53.65 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
..++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 47999999999999999999999999999999987654
No 336
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.08 E-value=0.071 Score=54.48 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (431)
-.|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 37999999999999999999999999999987
No 337
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.04 E-value=0.047 Score=49.69 Aligned_cols=36 Identities=14% Similarity=0.155 Sum_probs=32.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
+...|+|||+|-.|+..|..|.++|.+|+|++.+..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 456799999999999999999999999999998653
No 338
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=93.02 E-value=0.21 Score=49.48 Aligned_cols=42 Identities=31% Similarity=0.296 Sum_probs=39.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
.+|||+|||||++||+||..|+++|++|+|+|+ +.+||.|..
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 479999999999999999999999999999999 789997664
No 339
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.01 E-value=0.084 Score=49.29 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (431)
..|.|||+|..|...|..|+++|+ +|.++|.+.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 479999999999999999999998 999999875
No 340
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=92.97 E-value=0.25 Score=49.05 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~G 58 (431)
+.++||||||||++|++||..|+++ |.+|+|+|+++++|
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 4579999999999999999999887 89999999998876
No 341
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.90 E-value=0.098 Score=45.77 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..+.|||+|..|...|..|+++|++|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999998863
No 342
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.90 E-value=0.09 Score=49.44 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (431)
..|.|||+|--|.+.|..|+++|++|++++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 57999999999999999999999999999886
No 343
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.90 E-value=0.067 Score=53.69 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
..|+|||+|.+|+-+|..|++.|.+|+++++.+++.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC
Confidence 479999999999999999999999999999998875
No 344
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.88 E-value=0.059 Score=53.18 Aligned_cols=35 Identities=14% Similarity=0.312 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
.+.|||+|+|-.|...|..|+..|++|+|+|++..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999999853
No 345
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.87 E-value=0.089 Score=48.26 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
.|.|||+|.-|...|..|+++|++|++++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 689999999999999999999999999998754
No 346
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.84 E-value=0.043 Score=43.86 Aligned_cols=52 Identities=4% Similarity=-0.045 Sum_probs=40.4
Q ss_pred cEEEeCEEEEC-CCCCCCCCCCCchhhhhhhhhhhcccCCCCeEEEEEEEeCCCC
Q 014049 323 QDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (431)
Q Consensus 323 ~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 376 (431)
++++||+||++ |..++.. +.++|+||..+....+...++...|.++.++++|
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~--I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~F 56 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRF--VKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRW 56 (130)
T ss_dssp EEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHHCCEECEEEEEEEESSCG
T ss_pred eEEEcCEEEEcCCHHHHhc--CcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCC
Confidence 57899999986 4444444 3577889988777666667999999999999986
No 347
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.82 E-value=0.11 Score=48.50 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=33.0
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCC-cEEEEccC
Q 014049 18 IEPTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (431)
Q Consensus 18 ~~~~~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~ 54 (431)
++|....|.|||+|..|...|..|+++|+ +|.++|.+
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34455689999999999999999999999 99999997
No 348
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.82 E-value=0.1 Score=48.81 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|..|...|..|+++|++|++++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999874
No 349
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=92.78 E-value=0.28 Score=41.07 Aligned_cols=50 Identities=20% Similarity=0.074 Sum_probs=41.1
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.++.+.+.+.++..|.+++++ +|++|..+ ++. +.|++++| ++.||.||..
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~--~~~-~~v~~~~g-~i~ad~vI~A 105 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDM--GGV-FEVETEEG-VEKAERLLLC 105 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEEC--SSS-EEEECSSC-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEc--CCE-EEEEECCC-EEEECEEEEC
Confidence 467788888888999999999 99999875 343 57887788 8999999964
No 350
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.77 E-value=0.11 Score=48.80 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHH-HHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESV-ISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~-aA~~La~~G~~V~vlE~~~~ 56 (431)
..|.|||.|-+|++ +|..|.+.|++|.+.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 46899999999996 78899999999999999875
No 351
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=92.75 E-value=0.088 Score=51.26 Aligned_cols=34 Identities=29% Similarity=0.264 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
-..-|||.|.-|+..|..|+++|++|+++|.+..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 3678999999999999999999999999998864
No 352
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.75 E-value=0.071 Score=50.83 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.|.|||+|.-|...|..|+++|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999998863
No 353
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.72 E-value=0.12 Score=48.10 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (431)
..|.|||+|.-|.+.|..|+++|+ +|.+++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 479999999999999999999999 999999876
No 354
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.72 E-value=0.11 Score=47.30 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
..|+|.|||.-|...+..|.++|++|.++.++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4699999999999999999999999999998754
No 355
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=92.69 E-value=0.25 Score=49.18 Aligned_cols=39 Identities=38% Similarity=0.497 Sum_probs=35.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
+++||+|||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 468999999999999999999999999999999975444
No 356
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=92.69 E-value=0.22 Score=49.03 Aligned_cols=42 Identities=31% Similarity=0.317 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcccc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 63 (431)
.+|||+|||||++||+||..|+++|++|+|+|+ +.+||.|..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 45 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVI 45 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccc
Confidence 369999999999999999999999999999999 789997653
No 357
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=92.63 E-value=0.067 Score=51.75 Aligned_cols=59 Identities=15% Similarity=0.085 Sum_probs=41.5
Q ss_pred EEeecCCc---chHHHHHHHHHHhcCcEEEeCccee---------EEEEecCCCcEEEEEeCCCcEEEeCEEEEC
Q 014049 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVI---------SLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (431)
Q Consensus 271 ~~~p~gG~---~~l~~al~r~~~~~Gg~i~l~~~V~---------~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~~ 333 (431)
.+.+..|. ..+.++|.+.+++.|++++.+++|+ +|..+ ++++ +|++.+| +++||.||..
T Consensus 161 ~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~--~~~v-~v~~~~g-~i~a~~VV~A 231 (405)
T 3c4n_A 161 RVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT--NTHQ-IVVHETR-QIRAGVIIVA 231 (405)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCE-EEEEEEEEEC
T ss_pred EEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee--CCeE-EEEECCc-EEECCEEEEC
Confidence 44555553 5688999999999999999999999 88765 5554 7876666 7999998853
No 358
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=92.56 E-value=0.1 Score=48.16 Aligned_cols=37 Identities=16% Similarity=0.090 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+++++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 4799999999999999999999999999999988765
No 359
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=92.55 E-value=0.26 Score=49.15 Aligned_cols=52 Identities=23% Similarity=0.226 Sum_probs=42.9
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEe--CCCc--EEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL--ASGQ--DILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~--~~G~--~i~Ad~VI~ 332 (431)
..+.+.|.+.+++.|++|+++++|++|..+ ++++++|++ .+|+ +++||.||.
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~--~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE--GERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE--TTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE--CCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 467788888888899999999999999987 777766665 3574 799999994
No 360
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.54 E-value=0.13 Score=47.71 Aligned_cols=33 Identities=30% Similarity=0.505 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||.|.-|...|..|+++|++|++++++.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999875
No 361
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.53 E-value=0.053 Score=48.03 Aligned_cols=32 Identities=13% Similarity=0.175 Sum_probs=30.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (431)
..|.|||+|.-|.+.|..|+++|++|..+++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 47999999999999999999999999999985
No 362
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.53 E-value=0.1 Score=51.69 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=31.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
|.+.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 456789999999999999999999999999999863
No 363
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.53 E-value=0.12 Score=48.23 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (431)
..|.|||+|..|...|..|+.+|+ +|.++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999874
No 364
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.47 E-value=0.086 Score=48.36 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
.|.|||+|.-|...|..|+++|++|++++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 689999999999999999999999999998764
No 365
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.45 E-value=0.11 Score=48.37 Aligned_cols=33 Identities=30% Similarity=0.348 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (431)
..|.|||+|-.|...|..|+++|+ +|.++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999999 999999874
No 366
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.42 E-value=0.079 Score=49.20 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC-----C-CcEEEEcc
Q 014049 23 FDLIVIGTGLPESVISAAASAS-----G-KSVLHLDP 53 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~-----G-~~V~vlE~ 53 (431)
..|.|||+|.-|...|..|+++ | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999987
No 367
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.40 E-value=0.097 Score=51.73 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~ 55 (431)
..|.|||+|..|+..|..|+++ |++|++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999999864
No 368
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=92.40 E-value=0.12 Score=50.98 Aligned_cols=36 Identities=22% Similarity=0.129 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-cEEEEccCCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFY 57 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~~ 57 (431)
..+|+|||+|..|+-+|..|.+.|. +|++++++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 3579999999999999999999997 59999998865
No 369
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.37 E-value=0.3 Score=48.51 Aligned_cols=42 Identities=17% Similarity=0.167 Sum_probs=38.5
Q ss_pred cccEEEECCChhHHHHHHHHhhC---CCcEEEEccCCCCCCccccc
Q 014049 22 AFDLIVIGTGLPESVISAAASAS---GKSVLHLDPNPFYGSHFSSL 64 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~---G~~V~vlE~~~~~GG~~~t~ 64 (431)
+|||||||||++|++||..|++. |++|+|+|+++ +||.|...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~ 46 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLD 46 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCc
Confidence 48999999999999999999999 99999999999 99976543
No 370
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.32 E-value=0.089 Score=50.14 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999885
No 371
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=92.29 E-value=0.29 Score=49.12 Aligned_cols=38 Identities=5% Similarity=0.161 Sum_probs=34.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhh---CCCcEEEEccCCCC
Q 014049 20 PTAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~---~G~~V~vlE~~~~~ 57 (431)
+..+||||||||++|+++|+.|++ +|.+|+|+|+.+..
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 346899999999999999999999 99999999997644
No 372
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.28 E-value=0.073 Score=50.41 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=32.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCC-------CcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G-------~~V~vlE~~~~ 56 (431)
...|.|||+|.-|.+.|..|+++| ++|.+++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 357999999999999999999999 99999999876
No 373
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=92.26 E-value=0.29 Score=49.90 Aligned_cols=51 Identities=12% Similarity=0.188 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHh-cCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..+.++|.+.++. .|.+| +++.|+.|..+ ++++++|++.+|+++.||.||+
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e--~g~V~GV~t~dG~~i~AdaVVL 174 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVK--NNQVVGVRTNLGVEYKTKAVVV 174 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEES--SSBEEEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEec--CCEEEEEEECCCcEEEeCEEEE
Confidence 4678888888877 58888 68999999887 7888899999999999999885
No 374
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.26 E-value=0.12 Score=47.76 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|.-|...|..|+++|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999999874
No 375
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.22 E-value=0.12 Score=47.55 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
..|+|||+|..|+-+|..|++.|.+|+++++++++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 47999999999999999999999999999999887
No 376
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.20 E-value=0.068 Score=43.40 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|..|...|..|++.|.+|.+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 469999999999999999999999999999863
No 377
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=92.18 E-value=0.33 Score=49.38 Aligned_cols=42 Identities=29% Similarity=0.244 Sum_probs=37.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
+.++||||||+|++||+||+.|+++|.+|+||||+...||..
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s 46 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHT 46 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc
Confidence 346899999999999999999999999999999998876644
No 378
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.17 E-value=0.13 Score=44.68 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=29.5
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIG-aGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.|.||| +|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 489999 99999999999999999999999863
No 379
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=92.17 E-value=0.14 Score=50.82 Aligned_cols=33 Identities=9% Similarity=0.015 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
-.++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 469999999999999999999999999999865
No 380
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=92.17 E-value=0.32 Score=50.24 Aligned_cols=42 Identities=31% Similarity=0.318 Sum_probs=37.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
+.++||||||+|++||+||+.|+++|.+|+||||....||.+
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s 44 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHS 44 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGG
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcc
Confidence 346899999999999999999999999999999998776544
No 381
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=92.14 E-value=0.27 Score=50.42 Aligned_cols=42 Identities=21% Similarity=0.160 Sum_probs=37.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 20 ~~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
+.++||||||||++||+||+.|+++|.+|+||||....||.+
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s 57 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHT 57 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 346899999999999999999999999999999988766643
No 382
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.13 E-value=0.14 Score=50.64 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
+.+|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999875
No 383
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.13 E-value=0.11 Score=50.28 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.|.|||+|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999864
No 384
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.11 E-value=0.13 Score=49.90 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
..|||||.|-.|...|..|.+.|++|+++|++..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4699999999999999999999999999999854
No 385
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=92.09 E-value=0.14 Score=51.22 Aligned_cols=32 Identities=13% Similarity=0.074 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (431)
-.++|||+|..|+-.|..|++.|.+|+++++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 36999999999999999999999999999985
No 386
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=92.07 E-value=0.16 Score=47.35 Aligned_cols=49 Identities=12% Similarity=0.093 Sum_probs=34.4
Q ss_pred CccCCCCCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 7 ESELPVPPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 7 ~~~~~~~~~~~~~~~~~DviIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.+.-+.++.++.......|+|.|| |.-|...+..|+++|++|.++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 5 HHHHHHSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp ---------CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred ccccccccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 344445555555555567999997 9999999999999999999999854
No 387
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.05 E-value=0.13 Score=47.67 Aligned_cols=32 Identities=16% Similarity=0.082 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|--|.+.|..|+ +|++|+++.++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999875
No 388
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=92.05 E-value=0.35 Score=46.63 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=46.4
Q ss_pred EEeecCCcchHHHHHHHHHHhcCcEEEeCcceeEEEEecC--CCcEEEEEeCCCcEEEeCEEEE
Q 014049 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQN--SGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 271 ~~~p~gG~~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~--~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..+|..-...+.+.|.+.++..|++|+++++|++|..+++ +++ +.|++.+| +++||.||+
T Consensus 101 ~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 101 QLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp EEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred EEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 3566555678889999999999999999999999986410 133 57877666 799999885
No 389
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.05 E-value=0.099 Score=48.96 Aligned_cols=30 Identities=20% Similarity=0.265 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEcc
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~ 53 (431)
.|.|||+|..|...|..|+++|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 390
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.97 E-value=0.14 Score=47.54 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+++++.+++.+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~ 191 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA 191 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc
Confidence 4799999999999999999999999999999988743
No 391
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.96 E-value=0.15 Score=47.75 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (431)
..|.|||||..|...|..|+++|+ +|.++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999975
No 392
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=91.89 E-value=0.25 Score=50.36 Aligned_cols=52 Identities=13% Similarity=0.104 Sum_probs=43.8
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeC-CC--cEEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SG--QDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~-~G--~~i~Ad~VI~ 332 (431)
..+.+.|.+.++..|++++.+++|++|..+ ++..++|++. +| ++++||.||.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~~G~~~~i~AdlVV~ 182 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRRGGESVTVESDFVID 182 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEETTEEEEEEESEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEecCCceEEEEcCEEEE
Confidence 467888888888899999999999999876 5666788877 67 5799999994
No 393
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.88 E-value=0.14 Score=47.12 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|..|...|..|+++|++|.+++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999864
No 394
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.87 E-value=0.17 Score=47.72 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||.|.-|.+.|..|+++|++|.+++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999875
No 395
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=91.80 E-value=0.44 Score=47.68 Aligned_cols=37 Identities=11% Similarity=0.229 Sum_probs=33.9
Q ss_pred CcccEEEECCChhHHHHHHHHhh------------CCCcEEEEccCCCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASA------------SGKSVLHLDPNPFY 57 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~------------~G~~V~vlE~~~~~ 57 (431)
..+||||||||++|+++|+.|++ +|.+|+|+|+.+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~ 54 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVA 54 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCC
Confidence 35899999999999999999999 99999999997653
No 396
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.80 E-value=0.14 Score=50.76 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~ 55 (431)
..|.|||+|..|+..|..|+++ |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 79999999763
No 397
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.80 E-value=0.15 Score=47.25 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (431)
.|.|||+|..|...|..|+.+|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 58999999999999999999999 999999874
No 398
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=91.77 E-value=0.4 Score=46.93 Aligned_cols=37 Identities=14% Similarity=0.285 Sum_probs=35.1
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~~~GG 59 (431)
+||||||||++||+||..|++. |++|+|+|+++++|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~ 41 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGY 41 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcc
Confidence 5999999999999999999998 999999999999883
No 399
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=91.71 E-value=0.22 Score=47.63 Aligned_cols=55 Identities=15% Similarity=0.143 Sum_probs=42.0
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEe-CCCc--EEEeCEEE-ECCC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL-ASGQ--DILSHKLV-LDPS 335 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~-~~G~--~i~Ad~VI-~~p~ 335 (431)
..+.+.|.+.+...|++|+++++|++|..+ ++..+.|++ .+|+ +++||.|| ++..
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDL--QGERPYVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECT--TSSSCEEEEEETTEEEEEECSEEEECCCT
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEe--cCCceEEEEecCCcEEEEEeCEEEECCCC
Confidence 467788888888889999999999999864 222245766 6887 79999999 4443
No 400
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.63 E-value=0.16 Score=45.72 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCC----CcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASG----KSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G----~~V~vlE~~~~ 56 (431)
...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 347999999999999999999999 79999998865
No 401
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.59 E-value=0.15 Score=46.32 Aligned_cols=33 Identities=9% Similarity=-0.088 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
..|+|||+|..|+-+|..|++.| +|+++++.+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 57999999999999999999999 9999998876
No 402
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.58 E-value=0.25 Score=45.48 Aligned_cols=52 Identities=17% Similarity=0.057 Sum_probs=32.9
Q ss_pred CCCCccCCCCCCCCCCCCcccEEEECCC---hhHHHHHHHHhhCCCcEEEEccCC
Q 014049 4 NESESELPVPPYPPIEPTAFDLIVIGTG---LPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~DviIIGaG---l~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
||.++.=|.+--+.+..+..-++|.||+ --|...|..|+++|++|.++.++.
T Consensus 12 ~~~~~~gp~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 12 LEAQTQGPGSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp ---------CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred ceecccCCccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3444444444333333444568899985 678999999999999999998874
No 403
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=91.48 E-value=0.42 Score=43.55 Aligned_cols=53 Identities=8% Similarity=0.050 Sum_probs=41.3
Q ss_pred cchHHHHHHHHHHh-cCcEEEeCcceeEEEEecCCCcEEEEEeC---------CC-----cEEEeCEEEE
Q 014049 278 QGELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLA---------SG-----QDILSHKLVL 332 (431)
Q Consensus 278 ~~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~---------~G-----~~i~Ad~VI~ 332 (431)
..++.+.|.+.+.+ .|.+++++++|++|..+ ++++.+|++. +| ++++||.||.
T Consensus 118 ~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~--~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~ 185 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVS 185 (284)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEETEEEEEEEEE--TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEcCcEEEEEEec--CCeEEEEEEeccccccccCccccCceEEEECCEEEE
Confidence 35677777777765 69999999999999987 6777788763 32 5799999985
No 404
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=91.45 E-value=0.41 Score=47.65 Aligned_cols=54 Identities=19% Similarity=0.100 Sum_probs=42.6
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCc---EEEeCEEE-ECCC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ---DILSHKLV-LDPS 335 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~---~i~Ad~VI-~~p~ 335 (431)
..+-+.|.+.+++.|++|+++++|++|..+ ++. +.|++.+|+ +++||.|| ++..
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~--~~~-v~v~~~~~~g~~~~~a~~vVgADG~ 163 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDD--GAG-VTVEVRGPEGKHTLRAAYLVGCDGG 163 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEE--TTE-EEEEEEETTEEEEEEESEEEECCCT
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEc--CCe-EEEEEEcCCCCEEEEeCEEEECCCc
Confidence 467778888888899999999999999987 454 357766665 79999999 5543
No 405
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.42 E-value=0.2 Score=50.49 Aligned_cols=36 Identities=14% Similarity=0.008 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
-.++|||+|..|+-.|..+++-|.+|+|+++...+-
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~ 259 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR 259 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc
Confidence 479999999999999999999999999999866553
No 406
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=91.39 E-value=0.35 Score=49.56 Aligned_cols=51 Identities=16% Similarity=0.135 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHh-cCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~-~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..+.++|.+.++. .|.+| +++.|+.|..+ ++++++|++.+|++++||.||+
T Consensus 124 ~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e--~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 124 VLYRQAVRTALENQPNLMI-FQQAVEDLIVE--NDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EECCEEEEEES--SSBEEEEEETTSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEEEEEEEEec--CCEEEEEEECCCCEEECCEEEE
Confidence 3577888888877 68888 78899999886 7888899998998999999885
No 407
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.36 E-value=0.15 Score=47.60 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G-~~V~vlE~~~ 55 (431)
..|.|||+|.-|...|..|+++| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46999999999999999999999 9999999985
No 408
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=91.30 E-value=0.42 Score=47.52 Aligned_cols=54 Identities=13% Similarity=0.102 Sum_probs=42.5
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCc---EEEeCEEE-ECCC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ---DILSHKLV-LDPS 335 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~---~i~Ad~VI-~~p~ 335 (431)
..+-+.|.+.+++.|++|+++++|++|..+ ++. +.|++.+|+ +++||.|| ++..
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~--~~~-v~v~~~~~~g~~~~~a~~vVgADG~ 164 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDE--GDH-VVVEVEGPDGPRSLTTRYVVGCDGG 164 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEEC--SSC-EEEEEECSSCEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe--CCE-EEEEEEcCCCcEEEEeCEEEEccCc
Confidence 467778888888899999999999999886 444 357777765 79999999 5543
No 409
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.19 E-value=0.19 Score=46.64 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhC--CCcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~ 55 (431)
.|.|||+|..|...|..|+++ |++|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999996 79999999985
No 410
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=91.11 E-value=0.21 Score=49.45 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 479999999999999999999999999999853
No 411
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.05 E-value=0.21 Score=49.39 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
+.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999863
No 412
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=91.00 E-value=0.17 Score=49.86 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHh--------------------hCCC-cEEEEccCCCC
Q 014049 23 FDLIVIGTGLPESVISAAAS--------------------ASGK-SVLHLDPNPFY 57 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La--------------------~~G~-~V~vlE~~~~~ 57 (431)
..|+|||+|..|+-+|..|+ +.|. +|+|+++++..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 57999999999999999999 6787 79999998764
No 413
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.00 E-value=0.18 Score=48.66 Aligned_cols=33 Identities=30% Similarity=0.457 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 479999999999999999999999999999875
No 414
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.98 E-value=0.21 Score=45.40 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998864
No 415
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.82 E-value=0.22 Score=45.72 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999865
No 416
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.79 E-value=0.22 Score=47.22 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
.|+|||+|..|..+|..+.+.|++|+++|.+..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 589999999999999999999999999998754
No 417
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.78 E-value=0.24 Score=46.27 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (431)
....|.|||+|..|.+.|..|+..|+ +|.++|.+.
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 34589999999999999999999999 999999876
No 418
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.75 E-value=0.26 Score=45.05 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC---cEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGK---SVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~---~V~vlE~~~ 55 (431)
...|.|||+|.-|.+.|..|+++|+ +|.+++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999999 999999875
No 419
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.75 E-value=0.2 Score=45.49 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|+|+|||.-|...+..|.++|++|.++.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 369999999999999999999999999998865
No 420
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=90.73 E-value=0.4 Score=43.91 Aligned_cols=47 Identities=13% Similarity=0.036 Sum_probs=36.2
Q ss_pred cCCCCCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 9 ELPVPPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 9 ~~~~~~~~~~~~~~~DviIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.++.|..++..+...-++|.|| |.-|...|..|+++|++|.++.++.
T Consensus 13 ~~~~~~~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~ 60 (302)
T 1w6u_A 13 PLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 60 (302)
T ss_dssp CCCSCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cccCCCCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3555655555555556888875 6789999999999999999998764
No 421
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.71 E-value=0.19 Score=52.48 Aligned_cols=33 Identities=30% Similarity=0.287 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999875
No 422
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=90.67 E-value=0.19 Score=45.19 Aligned_cols=32 Identities=9% Similarity=0.240 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhCC-CcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G-~~V~vlE~~~ 55 (431)
.|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 4899999999999999999999 9999999864
No 423
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=90.65 E-value=0.25 Score=44.19 Aligned_cols=47 Identities=11% Similarity=0.102 Sum_probs=29.3
Q ss_pred ccCCCCCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 8 SELPVPPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 8 ~~~~~~~~~~~~~~~~DviIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
+.||.+++..-|. .-|+|.|| |--|...|..|+++|++|.++.++..
T Consensus 10 ~~~~~~~~~~~m~--k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~ 57 (251)
T 3orf_A 10 HSSGLVPRGSHMS--KNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN 57 (251)
T ss_dssp ------------C--CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred ccccccccccccC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4455555554443 34788886 57899999999999999999998764
No 424
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=90.62 E-value=0.31 Score=48.53 Aligned_cols=56 Identities=18% Similarity=0.199 Sum_probs=40.9
Q ss_pred cchHHHHHHHHHHhcC-cEEEeCcceeEEEEecCCCcEEEEEeC--CC-----cEEEeCEEEEC
Q 014049 278 QGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLA--SG-----QDILSHKLVLD 333 (431)
Q Consensus 278 ~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g~~~gV~~~--~G-----~~i~Ad~VI~~ 333 (431)
-...+.++.+.++..| .+|++++.|++|..+.++++++||++. +| .+++|+.||++
T Consensus 220 r~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIla 283 (504)
T 1n4w_A 220 KQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLG 283 (504)
T ss_dssp BCCTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEEC
T ss_pred ccCHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEc
Confidence 4454556666666666 899999999999987212379999874 56 36889988864
No 425
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.56 E-value=0.3 Score=44.37 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..++|+|+|-.|.++|..|++.|.+|+|+.++.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 469999999999999999999999999998763
No 426
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.56 E-value=0.23 Score=49.35 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 427
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.55 E-value=0.23 Score=47.62 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999875
No 428
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=90.50 E-value=0.24 Score=49.05 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999864
No 429
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.50 E-value=0.12 Score=45.74 Aligned_cols=32 Identities=6% Similarity=-0.030 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..++|+|+|-.|...|..|.+.|+ |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 469999999999999999999999 99999874
No 430
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.31 E-value=0.3 Score=44.63 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=30.5
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+ |.-|...|..|+++|++|.+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 36999999 9999999999999999999999864
No 431
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.22 E-value=0.25 Score=47.14 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|+|+|+|-.|+.+|..|+..|.+|++++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 432
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.21 E-value=0.29 Score=42.38 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=29.3
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.|+|+|| |.-|...+..|.++|++|.++.++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 4899995 9999999999999999999999874
No 433
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.20 E-value=0.25 Score=45.39 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|..|...|..|+++|++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 369999999999999999999999999999864
No 434
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=90.20 E-value=0.18 Score=48.18 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=31.0
Q ss_pred cEEEECCChhHHHHHHHHhhCC-------CcEEEEccCCC
Q 014049 24 DLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G-------~~V~vlE~~~~ 56 (431)
.|.|||+|.-|.+.|..|+++| ++|++++++..
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999998765
No 435
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.10 E-value=0.22 Score=46.45 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (431)
.|.|||+|..|.+.|..|+++|+ +|.++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999874
No 436
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.05 E-value=0.32 Score=45.38 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (431)
...|.|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4579999999999999999999998 999999876
No 437
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=90.05 E-value=0.21 Score=52.23 Aligned_cols=36 Identities=8% Similarity=0.153 Sum_probs=33.0
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIG--aGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+||| +|..|+-+|..|++.|.+|+++++.+ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 4799998 99999999999999999999999998 654
No 438
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=90.05 E-value=0.15 Score=55.19 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCCCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~~GG 59 (431)
..|+|||+|..|+-+|..|++.|.+|+|+|+++++..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch
Confidence 4799999999999999999999999999999998754
No 439
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.03 E-value=0.27 Score=48.71 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999863
No 440
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=90.02 E-value=0.32 Score=44.51 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=31.2
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCcEEEEccCCCCC
Q 014049 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPFYG 58 (431)
Q Consensus 24 DviIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~~~G 58 (431)
.|+|.|| |+-|...+..|.++|++|.++-|++..+
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~ 37 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG 37 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC
Confidence 5899998 9999999999999999999998876543
No 441
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.02 E-value=0.26 Score=46.79 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|+|+|+|-.|+.++..|...|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 442
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.01 E-value=0.28 Score=45.89 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--cEEEEccC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPN 54 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~--~V~vlE~~ 54 (431)
...|.|||+|..|.+.|..|+..|. +|.++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3579999999999999999999998 89999985
No 443
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=89.96 E-value=0.52 Score=48.12 Aligned_cols=40 Identities=20% Similarity=0.179 Sum_probs=36.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CcEEEEccCCCCCCc
Q 014049 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSH 60 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G--~~V~vlE~~~~~GG~ 60 (431)
.++||||||+|++||+||+.|+++| .+|+||||....+|.
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~ 45 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH 45 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh
Confidence 3689999999999999999999999 999999999877664
No 444
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.94 E-value=0.32 Score=41.50 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.1
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|+|+|| |.-|...+..|.++|++|.++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 36899998 9999999999999999999998864
No 445
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.93 E-value=0.28 Score=44.58 Aligned_cols=32 Identities=22% Similarity=0.480 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (431)
.|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 58999999999999999999999 999999874
No 446
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.91 E-value=0.25 Score=48.65 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=31.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (431)
+...|+|||+|-.|...|..|.++|.+|+|++.+
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 4467999999999999999999999999999985
No 447
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.91 E-value=0.17 Score=48.94 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=27.9
Q ss_pred ccEEEECCChhHHHHHHHHhh-CCCcEEEEc
Q 014049 23 FDLIVIGTGLPESVISAAASA-SGKSVLHLD 52 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~-~G~~V~vlE 52 (431)
..|.|||+|.-|.+.|..|++ +|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 369999999999999999998 599999998
No 448
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.91 E-value=0.3 Score=45.49 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--cEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~--~V~vlE~~~ 55 (431)
...|.|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999998 899999874
No 449
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=89.88 E-value=0.29 Score=45.86 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=31.3
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCCCC
Q 014049 22 AFDLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (431)
Q Consensus 22 ~~DviIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~~~ 57 (431)
...|+|.|| |.-|...+..|.++|++|.++.++..-
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 457999998 999999999999999999999988654
No 450
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=89.87 E-value=0.66 Score=43.16 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=41.2
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..+.+.+.+.++.+|.+++++++|++|..+ ++...+|++.+| ++.||+||+
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~v~~~~g-~~~~d~vV~ 126 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHF--GERLRVVARDGR-QWLARAVIS 126 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEE--TTEEEEEETTSC-EEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEC--CCcEEEEEeCCC-EEEeCEEEE
Confidence 467777878888899999999999999886 555333887776 899999885
No 451
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.83 E-value=0.28 Score=46.74 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=31.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (431)
.-.|||+|||-+|..+|..|...|. +|.++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4689999999999999999999998 999999984
No 452
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.73 E-value=0.32 Score=42.27 Aligned_cols=32 Identities=34% Similarity=0.529 Sum_probs=29.2
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.|+|.|| |.-|...+..|.++|++|.++.++.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4899998 9999999999999999999998763
No 453
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=89.65 E-value=0.22 Score=51.93 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999875
No 454
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.63 E-value=0.25 Score=43.06 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=30.1
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIG-aGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|+|.| +|.-|...+..|.++|++|.++.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4699999 49999999999999999999999874
No 455
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.61 E-value=0.32 Score=45.13 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (431)
..|.|||||..|...|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 369999999999999999999997 999999874
No 456
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=89.52 E-value=0.3 Score=45.35 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=34.2
Q ss_pred CcccEEEECCC-hhHHHHHHHHhhCCCcEEEEccC--------CCCCCcccc
Q 014049 21 TAFDLIVIGTG-LPESVISAAASASGKSVLHLDPN--------PFYGSHFSS 63 (431)
Q Consensus 21 ~~~DviIIGaG-l~GL~aA~~La~~G~~V~vlE~~--------~~~GG~~~t 63 (431)
....|+|||+| +.|..+|..|...|.+|+|++++ ...++..++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~ 227 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHH 227 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhccc
Confidence 34689999999 67999999999999999988554 566665443
No 457
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=89.51 E-value=0.58 Score=44.91 Aligned_cols=52 Identities=17% Similarity=0.092 Sum_probs=40.9
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEE-ECCC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLV-LDPS 335 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI-~~p~ 335 (431)
..|.+.|.+.+.. ++|+++++|++|..+ ++. +.|++++|++++||.|| ++..
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~--~~~-v~v~~~~g~~~~a~~vV~AdG~ 179 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEED--ADG-VTVWFTDGSSASGDLLIAADGS 179 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECCCT
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEec--CCc-EEEEEcCCCEEeeCEEEECCCc
Confidence 4666777776655 889999999999987 454 56888999999999999 4443
No 458
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=89.45 E-value=0.24 Score=45.63 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=27.4
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
.|-+||-|.-|...|..|.++|++|++++++..
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 599999999999999999999999999998764
No 459
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.39 E-value=0.31 Score=46.30 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-cEEEEccC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~ 54 (431)
....|+|+|||-+|..+|..|...|. +|.++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 34689999999999999999999998 79999997
No 460
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.37 E-value=0.29 Score=43.88 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (431)
...|+|||+|=.|..+|..|+++|. +++++|...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3579999999999999999999997 899999864
No 461
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.37 E-value=0.29 Score=44.11 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCc-EEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~-V~vlE~~~ 55 (431)
..|.|||+|..|...|..|+++|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4799999999999999999999999 89998764
No 462
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.35 E-value=0.32 Score=43.61 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 369999999999999999999999999999864
No 463
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.25 E-value=0.27 Score=45.54 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G--~~V~vlE~~~ 55 (431)
.|.|||+|-.|...|..|+++| .+|.++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6899999999999999999999 7999999874
No 464
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=89.16 E-value=0.36 Score=45.38 Aligned_cols=33 Identities=18% Similarity=0.091 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|.-|.+.|..|+++|++|.+.+++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 369999999999999999999999999999875
No 465
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.15 E-value=0.32 Score=44.30 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.|.|||+|.-|...|..|++ |++|.+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 58999999999999999999 99999999864
No 466
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.12 E-value=0.4 Score=42.70 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC----cEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGK----SVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~----~V~vlE~~~ 55 (431)
..|.|||+|.-|...|..|+++|+ +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 369999999999999999999998 999999874
No 467
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.12 E-value=0.34 Score=46.34 Aligned_cols=33 Identities=33% Similarity=0.395 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|+|||+|-.|+.+|..|+..|.+|++++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 468
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.06 E-value=0.3 Score=53.20 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCC-cEEEEccCCC
Q 014049 24 DLIVIGTGLPESVISAAASASGK-SVLHLDPNPF 56 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~~ 56 (431)
+|+|||+|..|+-+|..|++.|. +|++++++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 79999999999999999999996 8999999873
No 469
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=89.05 E-value=0.58 Score=42.98 Aligned_cols=54 Identities=9% Similarity=0.035 Sum_probs=34.2
Q ss_pred CccCCCCCCCCCCCCcccEEEECCC-hhHHHHHHHHhhCCCcEEEEccCCCCCCc
Q 014049 7 ESELPVPPYPPIEPTAFDLIVIGTG-LPESVISAAASASGKSVLHLDPNPFYGSH 60 (431)
Q Consensus 7 ~~~~~~~~~~~~~~~~~DviIIGaG-l~GL~aA~~La~~G~~V~vlE~~~~~GG~ 60 (431)
+|.++.|.......+..-++|.||+ --|...|..|+++|.+|.+++++....+.
T Consensus 13 ~~~~~~p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~ 67 (299)
T 3t7c_A 13 EAQTQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGV 67 (299)
T ss_dssp ---------CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTC
T ss_pred eccCCCCcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccc
Confidence 5566666554444444558888874 56999999999999999999998765543
No 470
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=89.00 E-value=0.47 Score=49.50 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
-..|.|||||..|.-.|..++.+|++|+++|.+..
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 35799999999999999999999999999998764
No 471
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=88.99 E-value=0.86 Score=46.59 Aligned_cols=50 Identities=22% Similarity=0.308 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHhc-CcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 280 ELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 280 ~l~~al~r~~~~~-Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
.+.+.|.+.++.. |.+| ++..|..|..+ +++++||++.+|++++||.||+
T Consensus 118 ~l~~~L~~~l~~~~GV~I-~~~~V~~L~~d--~g~V~GV~t~~G~~i~Ad~VVL 168 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDL-LQDTVIGVSAN--SGKFSSVTVRSGRAIQAKAAIL 168 (641)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEEE--TTEEEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEE-EeeEEEEEEec--CCEEEEEEECCCcEEEeCEEEE
Confidence 6677887877774 8888 56799999887 7888889999999999999885
No 472
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=88.96 E-value=0.35 Score=48.62 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
...|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 35799999999999999999999999999998654
No 473
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=88.93 E-value=0.3 Score=50.82 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=35.4
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCcEEEEccCCCCCCcc
Q 014049 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (431)
Q Consensus 23 ~DviIIG--aGl~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 61 (431)
.+|+||| +|..|+-+|..|++.|.+|+++++.+.+....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~ 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc
Confidence 3599999 99999999999999999999999999887654
No 474
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=88.79 E-value=0.43 Score=43.24 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..++|||+|-+|.++|..|++.|.+|.|+.|+.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999998874
No 475
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=88.75 E-value=0.27 Score=44.64 Aligned_cols=33 Identities=6% Similarity=0.139 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..++|+|+|-.|.++|..|++.|.+|+|+.++.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999998874
No 476
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=88.68 E-value=0.42 Score=44.53 Aligned_cols=43 Identities=16% Similarity=0.074 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCcccEEEEC-CChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 11 PVPPYPPIEPTAFDLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 11 ~~~~~~~~~~~~~DviIIG-aGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
|+++...+.+ ..|+|.| +|.-|...+..|.++|++|.++.++.
T Consensus 12 ~~~~~~~~~~--~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 55 (333)
T 2q1w_A 12 SGLVPRGSHM--KKVFITGICGQIGSHIAELLLERGDKVVGIDNFA 55 (333)
T ss_dssp ---------C--CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CceeeecCCC--CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5555555554 3599998 59999999999999999999998864
No 477
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=88.56 E-value=0.76 Score=46.01 Aligned_cols=55 Identities=20% Similarity=0.180 Sum_probs=42.6
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCC-c--EEEEEeCCC---cEEEeCEEE-ECCC
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSG-S--YKGVRLASG---QDILSHKLV-LDPS 335 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g-~--~~gV~~~~G---~~i~Ad~VI-~~p~ 335 (431)
..+.+.|.+.+++.|++|+++++|++|..+ ++ + .+.|++.++ ++++||.|| ++..
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~ 181 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQH--DDDAGAGVTARLAGPDGEYDLRAGYLVGADGN 181 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE--CGGGCSEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEC--CCCccccEEEEEEcCCCeEEEEeCEEEECCCC
Confidence 467788888888899999999999999987 33 1 245666666 689999999 4443
No 478
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=88.50 E-value=0.56 Score=44.11 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=31.0
Q ss_pred CCcccEEEECC-ChhHHHHHHHHhhCCC--cEEEEccCC
Q 014049 20 PTAFDLIVIGT-GLPESVISAAASASGK--SVLHLDPNP 55 (431)
Q Consensus 20 ~~~~DviIIGa-Gl~GL~aA~~La~~G~--~V~vlE~~~ 55 (431)
+....|+|||+ |..|.++|..|+..|. +|.++|.+.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 44568999998 9999999999999995 899999853
No 479
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=88.50 E-value=0.35 Score=43.48 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=27.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEcc
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~ 53 (431)
.|.|||+|..|...|..|+++|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 488999999999999999999999999765
No 480
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.42 E-value=0.32 Score=44.53 Aligned_cols=32 Identities=19% Similarity=0.211 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..|.|||+|..|...|..|+++|++|.+++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 369999999999999999999999999998 54
No 481
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.40 E-value=0.34 Score=44.24 Aligned_cols=33 Identities=9% Similarity=0.181 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~--G~~V~vlE~~~ 55 (431)
..|.|||+|.-|...|..|+++ |++|.+++++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 4799999999999999999998 68999998864
No 482
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.36 E-value=0.52 Score=43.42 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-cEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~-~V~vlE~~~ 55 (431)
..|+|||+|-.|..+|..|++.|. +|+|+.++.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 469999999999999999999997 999998863
No 483
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=88.34 E-value=0.43 Score=44.57 Aligned_cols=45 Identities=13% Similarity=0.053 Sum_probs=30.4
Q ss_pred CCCCCCCCCC---CcccEEEECC-ChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 11 PVPPYPPIEP---TAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 11 ~~~~~~~~~~---~~~DviIIGa-Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
|.|.+|+.+. ....|+|.|| |.-|...+..|.++|++|.++.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 13 GRENLYFQGHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp --------------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cccccccccccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4444444432 2346999998 9999999999999999999998763
No 484
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=88.19 E-value=0.33 Score=46.31 Aligned_cols=39 Identities=21% Similarity=0.201 Sum_probs=35.0
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCC---cEEEEccCC-CCCCc
Q 014049 22 AFDLIVIGT-GLPESVISAAASASGK---SVLHLDPNP-FYGSH 60 (431)
Q Consensus 22 ~~DviIIGa-Gl~GL~aA~~La~~G~---~V~vlE~~~-~~GG~ 60 (431)
.-.|+|||+ |..|+.|+..+..-|. +|+++|.+. .-||+
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 468999999 9999999999999997 999999986 55776
No 485
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.03 E-value=0.69 Score=41.46 Aligned_cols=34 Identities=21% Similarity=0.153 Sum_probs=29.4
Q ss_pred cccEEEECC-Ch-hHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGT-GL-PESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGa-Gl-~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..-|+|.|| |- -|...|..|+++|++|+++.++.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 345899998 75 89999999999999999998863
No 486
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=87.92 E-value=1 Score=42.73 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=40.2
Q ss_pred chHHHHHHHHHHhcCcEEEeCcceeEEEEecCCCcEEEEEeCCCcEEEeCEEEE
Q 014049 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (431)
Q Consensus 279 ~~l~~al~r~~~~~Gg~i~l~~~V~~I~~~~~~g~~~gV~~~~G~~i~Ad~VI~ 332 (431)
..+.+.|.+.+...|++|+++++|++|.. ++ .|++.+|++++||.||.
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~---~~---~v~~~~g~~~~ad~vV~ 154 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP---VG---RLTLQTGEVLEADLIVG 154 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET---TT---EEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe---CC---EEEECCCCEEEcCEEEE
Confidence 56778888888889999999999999964 34 56778899999999984
No 487
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=87.89 E-value=0.47 Score=43.74 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
...|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4579999999999999999999999999999874
No 488
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.88 E-value=0.4 Score=43.61 Aligned_cols=33 Identities=18% Similarity=0.286 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
..++|||+|-.|.+.|..|++.|.+|++++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 479999999999999999999999999998873
No 489
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=87.85 E-value=0.47 Score=46.67 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
...|+|+|+|-.|..+|..|+..|.+|++.|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3568999999999999999999999999999864
No 490
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=87.81 E-value=0.44 Score=46.75 Aligned_cols=32 Identities=16% Similarity=0.191 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~ 54 (431)
..|+|+|+|..|...|..|++.|++|.+++++
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEECC
Confidence 46999999999999999999999999999876
No 491
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=87.76 E-value=0.68 Score=42.37 Aligned_cols=34 Identities=9% Similarity=0.112 Sum_probs=30.2
Q ss_pred CcccEEEECCC-hhHHHHHHHHhhCCCcEEEEccC
Q 014049 21 TAFDLIVIGTG-LPESVISAAASASGKSVLHLDPN 54 (431)
Q Consensus 21 ~~~DviIIGaG-l~GL~aA~~La~~G~~V~vlE~~ 54 (431)
...+|+|||+| +.|.-+|..|.+.|..|+++.++
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 34689999999 68999999999999999999754
No 492
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=87.76 E-value=0.59 Score=46.54 Aligned_cols=55 Identities=11% Similarity=0.153 Sum_probs=40.7
Q ss_pred cchHHHHHHHHHHhcC-cEEEeCcceeEEEEecCCC-cEEEEEeC--CC-----cEEEeCEEEEC
Q 014049 278 QGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSG-SYKGVRLA--SG-----QDILSHKLVLD 333 (431)
Q Consensus 278 ~~~l~~al~r~~~~~G-g~i~l~~~V~~I~~~~~~g-~~~gV~~~--~G-----~~i~Ad~VI~~ 333 (431)
-...+.++.+.++..| .+|++++.|++|..+. ++ +++||++. +| .+++|+.||++
T Consensus 225 R~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~-~g~~~~gV~~~~~~g~~~~~~~~~A~~VIla 288 (507)
T 1coy_A 225 KKSLDKTYLAQAAATGKLTITTLHRVTKVAPAT-GSGYSVTMEQIDEQGNVVATKVVTADRVFFA 288 (507)
T ss_dssp BCCTTTTHHHHHHHTTCEEEECSEEEEEEEECS-SSSEEEEEEEECTTSCEEEEEEEEEEEEEEC
T ss_pred CcChHHHHHHHHHhcCCcEEEeCCEEEEEEECC-CCCEEEEEEEeCCCCcccccEEEEeCEEEEc
Confidence 4455566666666665 8999999999999872 34 79999874 56 36889988864
No 493
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=87.61 E-value=0.41 Score=47.53 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=31.1
Q ss_pred CcccEEEECCChhHHH-HHHHHhhCCCcEEEEccCCC
Q 014049 21 TAFDLIVIGTGLPESV-ISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~-aA~~La~~G~~V~vlE~~~~ 56 (431)
....|.|||.|-+|++ +|..|.+.|++|.+.|.+..
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~ 57 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN 57 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC
Confidence 3457999999999997 69999999999999998753
No 494
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=87.60 E-value=0.49 Score=42.48 Aligned_cols=36 Identities=11% Similarity=0.038 Sum_probs=29.8
Q ss_pred CCcccEEEECC---ChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 20 PTAFDLIVIGT---GLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 20 ~~~~DviIIGa---Gl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
....-|+|.|| |--|...|..|+++|++|.++.+++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 33456899996 4679999999999999999998873
No 495
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.50 E-value=0.54 Score=42.31 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 24 DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
.++|||+|-.|...|..|.+.|.+|.+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 496
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=87.46 E-value=1.1 Score=42.06 Aligned_cols=35 Identities=17% Similarity=0.127 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
...|.|||.|..|...|..|+..|.+|++++++..
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 45699999999999999999999999999998764
No 497
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.38 E-value=0.52 Score=43.23 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 22 ~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
...|.|||+|-.|..+|..|+..|.+|++++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 498
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=87.23 E-value=0.11 Score=44.93 Aligned_cols=34 Identities=24% Similarity=0.173 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCcEEEEccCCC
Q 014049 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~~ 56 (431)
..|.|||+|--|...|..|+++|++|.+++++..
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 4699999999999999999999999999988754
No 499
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=87.30 E-value=0.45 Score=46.72 Aligned_cols=38 Identities=16% Similarity=0.157 Sum_probs=32.4
Q ss_pred ccEEEECCChhHHHHHHHHhhC--------------------C-CcEEEEccCCCCCCc
Q 014049 23 FDLIVIGTGLPESVISAAASAS--------------------G-KSVLHLDPNPFYGSH 60 (431)
Q Consensus 23 ~DviIIGaGl~GL~aA~~La~~--------------------G-~~V~vlE~~~~~GG~ 60 (431)
-.|+|||+|..|+-+|..|++. | .+|+++++++.+-..
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~ 206 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAA 206 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCC
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhc
Confidence 5799999999999999999974 6 599999999876543
No 500
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=87.26 E-value=0.81 Score=42.79 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=31.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCcEEEEccCC
Q 014049 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (431)
Q Consensus 21 ~~~DviIIGaGl~GL~aA~~La~~G~~V~vlE~~~ 55 (431)
....|.|||.|..|...|..|+..|++|++++++.
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 34579999999999999999999999999999865
Done!