Query 014050
Match_columns 431
No_of_seqs 259 out of 1475
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 04:36:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014050.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014050hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h12_A Citrate synthase; acido 100.0 3E-111 1E-115 872.7 36.5 367 51-430 8-380 (436)
2 3l96_A Citrate synthase; quate 100.0 1E-110 5E-115 864.4 31.3 363 53-430 4-371 (426)
3 3msu_A Citrate synthase; helix 100.0 4E-110 1E-114 860.3 34.7 359 54-430 13-377 (427)
4 3hwk_A Methylcitrate synthase; 100.0 4.1E-98 1E-102 768.5 34.2 349 48-430 14-362 (414)
5 3tqg_A 2-methylcitrate synthas 100.0 1.2E-98 4E-103 765.5 28.6 318 92-430 2-320 (375)
6 1o7x_A Citrate synthase; lyase 100.0 2.2E-97 8E-102 757.8 32.1 320 94-430 1-322 (377)
7 1vgm_A 378AA long hypothetical 100.0 5.5E-97 2E-101 755.1 31.7 319 95-430 3-323 (378)
8 3o8j_A 2-methylcitrate synthas 100.0 1.2E-96 4E-101 756.0 32.3 317 96-430 32-349 (404)
9 1iom_A Citrate synthase; open 100.0 6.6E-96 2E-100 746.9 34.2 321 95-430 1-321 (377)
10 2ibp_A Citrate synthase; disul 100.0 4E-96 1E-100 754.7 31.6 327 97-430 22-355 (409)
11 2ifc_A Citrate synthase; oxalo 100.0 9E-96 3E-100 747.7 33.1 319 96-430 6-327 (385)
12 1vgp_A 373AA long hypothetical 100.0 1.9E-95 7E-100 742.8 32.4 316 96-430 2-319 (373)
13 2c6x_A Citrate synthase 1; tri 100.0 2.7E-95 9E-100 738.8 30.5 311 99-430 3-315 (363)
14 2p2w_A Citrate synthase; trans 100.0 7.2E-95 2.5E-99 736.9 30.9 307 98-430 3-309 (367)
15 1aj8_A Citrate synthase; hyper 100.0 2.9E-94 9.9E-99 733.5 34.9 314 99-430 3-316 (371)
16 1a59_A Citrate synthase; cold- 100.0 2.6E-94 8.8E-99 736.0 33.9 316 97-430 5-329 (378)
17 1csh_A Citrate synthase; lyase 100.0 1.2E-92 4.2E-97 733.7 27.6 329 91-430 30-382 (435)
18 3u5c_P 40S ribosomal protein S 52.3 5.6 0.00019 34.9 1.7 24 120-144 14-37 (142)
19 2xzm_S RPS15E; ribosome, trans 50.3 4.9 0.00017 35.3 1.1 25 120-144 10-42 (144)
20 1vgp_A 373AA long hypothetical 46.6 1.8E+02 0.0061 29.0 12.0 63 133-197 145-211 (373)
21 3j20_T 30S ribosomal protein S 44.6 5.3 0.00018 34.6 0.4 24 120-144 5-28 (132)
22 3iz6_R 40S ribosomal protein S 37.9 6.8 0.00023 34.7 0.0 24 120-144 23-46 (154)
23 2c6x_A Citrate synthase 1; tri 37.0 2.6E+02 0.0088 27.7 11.4 62 134-198 143-209 (363)
24 3tka_A Ribosomal RNA small sub 32.3 1.3E+02 0.0045 29.9 8.3 98 94-193 131-242 (347)
25 2ifc_A Citrate synthase; oxalo 31.3 72 0.0024 32.1 6.3 63 133-197 153-219 (385)
26 1vgm_A 378AA long hypothetical 28.0 89 0.003 31.3 6.3 63 133-197 149-215 (378)
27 1a59_A Citrate synthase; cold- 27.8 90 0.0031 31.2 6.3 63 133-197 151-217 (378)
28 1wg8_A Predicted S-adenosylmet 26.0 1.8E+02 0.0062 28.0 7.8 99 93-193 91-201 (285)
29 3tqg_A 2-methylcitrate synthas 23.5 1.9E+02 0.0065 28.9 7.7 61 135-197 153-217 (375)
30 2ibp_A Citrate synthase; disul 22.7 1.3E+02 0.0045 30.4 6.4 62 134-197 180-245 (409)
31 3hwk_A Methylcitrate synthase; 22.6 1.3E+02 0.0045 30.6 6.4 72 125-198 185-260 (414)
32 1iom_A Citrate synthase; open 21.6 2.4E+02 0.0081 28.1 8.0 64 133-198 149-216 (377)
33 1aj8_A Citrate synthase; hyper 21.2 2.5E+02 0.0084 28.0 8.0 62 134-197 149-214 (371)
No 1
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=100.00 E-value=2.9e-111 Score=872.69 Aligned_cols=367 Identities=47% Similarity=0.793 Sum_probs=342.5
Q ss_pred CCCceEEEEeccCCeEEEeeeeeCCC--ccceecccccccCCCccceeecCCCcccceeeeeeeeEeCCCCeeEEccCCH
Q 014050 51 NLKGSLTVVDERTGKRYQIPVSQEGT--VKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPI 128 (431)
Q Consensus 51 ~~~~~l~~~~~r~g~~~~~pi~~~~~--~~~~d~~~l~~~~~~~g~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I 128 (431)
+++.++|+ +++||+|||||+. || .+++||++|++ ++|++||||||.||++|+|+||+|||++|+|+||||||
T Consensus 8 ~~~~~~~~--~~~~~~~~~pi~~-~~~~~~~~d~~~l~~---~~g~~t~~~Gl~g~~~~~S~Is~idg~~G~L~YRGy~I 81 (436)
T 2h12_A 8 GKLSTATI--SVDGKSAEMPVLS-GTLGPDVIDIRKLPA---QLGVFTFDPGYGETAACNSKITFIDGDKGVLLHRGYPI 81 (436)
T ss_dssp ---CEEEE--EETTEEEEEEEEC-CSBSCCEEECTTHHH---HHSCEEECTTCTTEEEEEESSEEEETTTTEEEETTEEH
T ss_pred CCCCeEEE--EECCcEEEEeeec-CCCCCceeeehhhcc---cCCcEeeCCccCCCeeeeeeceEEeCCCCEEEECCeEH
Confidence 44567777 6789999999999 87 57799999964 78999999999999999999999999999999999999
Q ss_pred HHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHhCCCCCChhHHHHHHHHhhhhcCCCCCcccc
Q 014050 129 EELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALK 208 (431)
Q Consensus 129 ~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~~~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~ 208 (431)
+|||++++||||+||||+|+|||++|++.|..+|.+++.+|+++.+++++||+++|||++|++++++|++|+++...
T Consensus 82 ~dLa~~~~feEvayLLl~G~LPt~~el~~f~~~l~~~~~lp~~v~~~~~~~p~~~hPM~~l~~~v~aL~~~~~~~~~--- 158 (436)
T 2h12_A 82 AQLAENASYEEVIYLLLNGELPNKAQYDTFTNTLTNHTLLHEQIRNFFNGFRRDAHPMAILCGTVGALSAFYPDAND--- 158 (436)
T ss_dssp HHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCSCCGGGHHHHTTSCTTCCHHHHHHHHHHHHGGGCC-------
T ss_pred HHHHhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHhccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcCccccc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999886521
Q ss_pred CCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHh
Q 014050 209 GQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILH 288 (431)
Q Consensus 209 g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~lsy~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILh 288 (431)
. .+.+...++++|||||+|+|+|++||++.|+++++|+++++|++|||+||++.+.+.|+|+|..+++||++||||
T Consensus 159 ---~-~~~~~~~~~a~rLiAk~ptiaa~~yr~~~g~~~~~p~~~ls~a~nfl~ml~g~~~~~~~~~~~~~~~ld~~LiLh 234 (436)
T 2h12_A 159 ---I-AIPANRDLAAMRLIAKIPTIAAWAYKYTQGEAFIYPRNDLNYAENFLSMMFARMSEPYKVNPVLARAMNRILILH 234 (436)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTSCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHHH
T ss_pred ---C-CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHhcCCCCccCCCCHHHHHHHHhhheee
Confidence 1 123345678999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred hccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHHHHHHHhCCCCCHHHHHHHHhhcC--CcccccCCC
Q 014050 289 AEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRK--RKMSGFGHR 366 (431)
Q Consensus 289 ADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl~mL~eI~~~~~v~~~i~~~k~~~--~rL~GFGHr 366 (431)
||||+||||||+|++|||++|+|+||+|||+|||||+||||||+|++||++|++++++++||+++|+++ ++|||||||
T Consensus 235 ADHe~NaSTftaRvvaSt~ad~ysaiaAgi~aL~GPlHGGAne~v~~ml~ei~~~~~v~~~i~~~l~~~~g~~imGFGHr 314 (436)
T 2h12_A 235 ADHEQNASTSTVRLAGSTGANPFACIAAGIAALWGPAHGGANEAVLKMLARIGKKENIPAFIAQVKDKNSGVKLMGFGHR 314 (436)
T ss_dssp SCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSGGGHHHHHHHHHCTTSCCCCTTBCCS
T ss_pred cCCCCchHHHHHHHHHhcCccHHHHHHHHHHhcCCCccCCHHHHHHHHHHHhcCchHHHHHHHHHHhccCCCcccCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999966 899999999
Q ss_pred CCCCCCchHHHHHHHHHHHHHhhC--CCcHHHHHHHHHHHHhcCcccccCCCcccccchHhhhccc
Q 014050 367 VYKNYDPRAKVIRKLAEEVFSIVG--RDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 367 VYk~~DPRA~iL~~~a~el~~~~g--~~~l~~iA~~Le~~a~~d~yf~~r~LyPNVDfysg~i~~~ 430 (431)
|||++||||++||++|+++++..| .+|++++|.+||+++++|+||+.|+||||||||||+||+.
T Consensus 315 VYk~~DPRa~iLk~~a~~l~~~~g~~~~~~~~la~~lE~~al~~~~~~~k~l~pNVDfysg~i~~~ 380 (436)
T 2h12_A 315 VYKNFDPRAKIMQQTCHEVLTELGIKDDPLLDLAVELEKIALSDDYFVQRKLYPNVDFYSGIILKA 380 (436)
T ss_dssp SCSSCCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHSHHHHHTTCCBCTHHHHHHHHHH
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccCCCcChHHHHHHHHHH
Confidence 999999999999999999998888 6899999999999999999999999999999999999974
No 2
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=100.00 E-value=1.4e-110 Score=864.37 Aligned_cols=363 Identities=44% Similarity=0.781 Sum_probs=345.5
Q ss_pred CceEEEEeccCCeEEEeeeeeCCC--ccceecccccccCCCccceeecCCCcccceeeeeeeeEeCCCCeeEEccCCHHH
Q 014050 53 KGSLTVVDERTGKRYQIPVSQEGT--VKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEE 130 (431)
Q Consensus 53 ~~~l~~~~~r~g~~~~~pi~~~~~--~~~~d~~~l~~~~~~~g~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~e 130 (431)
+.+|++.+ ||+|||||+. || ++++||++|++ +|+++|||||.||++|+|+||+|||++|+|+||||||+|
T Consensus 4 ~~~~~~~~---~~~~~~pi~~-~~~~~~~~d~~~l~~----~g~~~~d~Gl~~~~~~~s~is~iDg~~G~L~YRGy~I~d 75 (426)
T 3l96_A 4 KAKLTLNG---DTAVELDVLK-GTLGQDVIDIRTLGS----KGVFTFDPGFTSTTSCESKITFIDGDEGILLHRGFPIDQ 75 (426)
T ss_dssp GGCEEEES---SSEEEECEEC-CSSSCCEEECTTHHH----HTCCEECTTSSSEEEEEESSEEEEGGGTEEEETTEEHHH
T ss_pred eEEEEeCC---CcEEEEeeee-CCCCCceeeeeeccc----CCcEEeCCCCCCceEEeEEeEEEECCCCEEEECCeEHHH
Confidence 46777743 6999999999 77 59999999984 899999999999999999999999999999999999999
Q ss_pred HhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHhCCCCCChhHHHHHHHHhhhhcCCCCCccccCC
Q 014050 131 LAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQ 210 (431)
Q Consensus 131 La~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~~~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~ 210 (431)
||++++||||+||||+|+|||++|+++|+++|.+++.+|+.+.+++++||+++|||++|++++++|++|+++...
T Consensus 76 La~~~~feevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~~~~~~~~~p~~~hPM~~l~~~vsaL~~~~~~~~~----- 150 (426)
T 3l96_A 76 LATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLD----- 150 (426)
T ss_dssp HHHHSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCCHHHHHHHTTSCTTSCHHHHHHHHHTTGGGTCGGGCC-----
T ss_pred HHhcCCHHHHHHHHHCCcCCCHHHHHHHHHHHHHccCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhCccccc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887532
Q ss_pred CcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhc
Q 014050 211 DIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAE 290 (431)
Q Consensus 211 ~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~lsy~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhAD 290 (431)
. .+.+.+.++++|||||+|||+|++||++.|+++++|++++||++|||+||++.+.+.|+|+|..+++||++||||||
T Consensus 151 -~-~~~~~~~~~a~rLiAk~pti~a~~yr~~~G~~~~~p~~~ls~a~nfl~ml~g~~~~~~~p~~~~~~~ld~~LiLhAD 228 (426)
T 3l96_A 151 -V-NNPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHAD 228 (426)
T ss_dssp -T-TSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTSCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHTTSC
T ss_pred -C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHhhccc
Confidence 1 23556678899999999999999999999999999999999999999999998888899999999999999999999
Q ss_pred cCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHHHHHHHhCCCCCHHHHHHHHhhcCC--cccccCCCCC
Q 014050 291 HEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVY 368 (431)
Q Consensus 291 Heln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl~mL~eI~~~~~v~~~i~~~k~~~~--rL~GFGHrVY 368 (431)
||+||||||+|+++||++|+|+||+|||++||||+||||||+|++||++|++++++++||+++|++++ +|||||||||
T Consensus 229 He~N~ST~taRvvaSt~ad~ysaiaAgi~aL~GplHGGAne~v~~ml~~i~~~~~~~~~v~~~l~~~~~~~I~GfGHrVy 308 (426)
T 3l96_A 229 HEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEIGKKENIPEFVRRAKDKNDSFRLMGFGHRVY 308 (426)
T ss_dssp CSSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTSSHHHHHHHHHHHCCSSSSTTTTSGGGCCSSCCTGGGTBCCSSC
T ss_pred CCCCchHHHHHHHhccCCcHHHHHHHHHHhccCCccCCHHHHHHHHHHHhcCchhHHHHHHHHHhCCCCcCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred CCCCchHHHHHHHHHHHHHhhC-CCcHHHHHHHHHHHHhcCcccccCCCcccccchHhhhccc
Q 014050 369 KNYDPRAKVIRKLAEEVFSIVG-RDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 369 k~~DPRA~iL~~~a~el~~~~g-~~~l~~iA~~Le~~a~~d~yf~~r~LyPNVDfysg~i~~~ 430 (431)
|++||||++|+++|+++++..| .+|++++|.+||+++.+|+||++|+||||||||||+||+.
T Consensus 309 k~~DPRa~~l~~~a~~l~~~~g~~~~~~~~a~~le~~~~~~~~~~~k~l~pNVDfysg~i~~~ 371 (426)
T 3l96_A 309 KNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKA 371 (426)
T ss_dssp SSCCTTHHHHHHHHHHHHHHTCSCCSSTTHHHHHHHHHHHCHHHHHHTCCBCHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcccccccCCCCchHHHHHHHHHH
Confidence 9999999999999999999888 6899999999999999999999999999999999999974
No 3
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=100.00 E-value=4.2e-110 Score=860.27 Aligned_cols=359 Identities=41% Similarity=0.726 Sum_probs=329.8
Q ss_pred ceEEEEeccCCeEEEeeeeeCCC--ccceecccccccCCCccceeecCCCcccceeeeeeeeEeCCCCeeEEccCCHHHH
Q 014050 54 GSLTVVDERTGKRYQIPVSQEGT--VKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEEL 131 (431)
Q Consensus 54 ~~l~~~~~r~g~~~~~pi~~~~~--~~~~d~~~l~~~~~~~g~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eL 131 (431)
.+|++.+ .||+|||||+. || ++++||++|++ +|+++|||||.||++|+|+||+|||++|+|+||||||+||
T Consensus 13 ~~~~~~~--~~~~~~~pi~~-~~~g~~~~d~~~l~~----~G~~t~d~Gl~~~~~~~s~is~iDg~~G~L~YRGy~I~dL 85 (427)
T 3msu_A 13 ATLKYAD--KNIEIELPVYS-PSLGNDCIDVSSLVK----HGIFTYDPGFMSTAACESKITYIDGGKGVLLHRGYPIEEW 85 (427)
T ss_dssp EEEEEGG--GTEEEEEEEEC-CSSSCEEEECGGGGG----GTEEEECTTCTTEEEEEESSEEEETTTTEEEETTEEHHHH
T ss_pred EEEEECC--CCcEEEeeeee-CCCCCceeeeHhhhh----CCCEeeCCCcCCceEEEEEeeEEeCCCCEEEECCeEHHHH
Confidence 5555521 15999999999 77 59999999983 8999999999999999999999999999999999999999
Q ss_pred hhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHhCCCCCChhHHHHHHHHhhhhcCCCCCccccCCC
Q 014050 132 AESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQD 211 (431)
Q Consensus 132 a~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~~~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~ 211 (431)
|++++||||+||||+|+|||++|+++|+++|.+++.+|+++.+++++||+++|||++|++++++|++|+++.
T Consensus 86 a~~~~feevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~~~~~i~~~p~~~hPM~~L~~~v~aL~~~~~~~-------- 157 (427)
T 3msu_A 86 TQKSNYRTLCYALIYGELPTDEQVKSFRQEIINKMPVCEHVKAAIAAMPQHTHPMSSLIAGVNVLAAEHIHN-------- 157 (427)
T ss_dssp HHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHHHHT--------
T ss_pred hccCCHHHHHHHHHcCcCCCHHHHHHHHHHHHHccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhhccCC--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999987321
Q ss_pred cccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc
Q 014050 212 IYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEH 291 (431)
Q Consensus 212 ~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~lsy~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADH 291 (431)
.+++.+.++++|||||+|||+|++||++.|+++++|++++||++|||+||++. ...|+|+|..+++||++|||||||
T Consensus 158 --~~~~~~~~~a~rLiAk~pti~a~~yr~~~G~~~~~p~~~ls~a~NfL~ml~~~-~~~~~p~~~~~~~ld~~LiLhADH 234 (427)
T 3msu_A 158 --GQKESQDEVAKNIVAKIATIAAMAYRHNHGKKFLEPKMEYGYAENFLYMMFAD-DESYKPDELHIKAMDTIFMLHADH 234 (427)
T ss_dssp --TSCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHHCS-STTCCCCHHHHHHHHHHHHHHSCC
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCccCHHHHHHHHHhcc-cccCCCCHHHHHHHHHHHhhccCC
Confidence 22345577899999999999999999999999999999999999999999987 567899999999999999999999
Q ss_pred CCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHHHHHHHhCCCCCHHHHHHHHhhcCC--cccccCCCCCC
Q 014050 292 EMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKR--KMSGFGHRVYK 369 (431)
Q Consensus 292 eln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl~mL~eI~~~~~v~~~i~~~k~~~~--rL~GFGHrVYk 369 (431)
|+||||||+|++|||++|+|+||+|||+|||||+||||||+|++||++|++++++++||+++|++|+ +||||||||||
T Consensus 235 e~N~ST~taRvvaSt~ad~ysavaAgi~aL~GPlHGGAne~v~~ml~ei~~~~~~~~~v~~~l~~~~~~~i~GFGHrVYk 314 (427)
T 3msu_A 235 EQNASTSTVRLSGSTGNSPYAAIIAGITALWGPAHGGANEAVLKMLSEIGSTENIDKYIAKAKDKDDPFRLMGFGHRVYK 314 (427)
T ss_dssp SSCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSHHHHCHHHHHHHHHHHHCSTTHHHHHHHHHHTC-----CCSBCCSSSS
T ss_pred CCChhHHHHHHHHccCCCHHHHHHHHHHHccCCccCCHHHHHHHHHHHhcCchHHHHHHHHHHhCCCCcCcCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCCchHHHHHHHHHHHHHhhC--CCcHHHHHHHHHHHHhcCcccccCCCcccccchHhhhccc
Q 014050 370 NYDPRAKVIRKLAEEVFSIVG--RDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 370 ~~DPRA~iL~~~a~el~~~~g--~~~l~~iA~~Le~~a~~d~yf~~r~LyPNVDfysg~i~~~ 430 (431)
++||||++|+++|+++++..| .+|++++|.+||+++.+|+||++|+||||||||||+||+.
T Consensus 315 ~~DPRa~~Lk~~a~~l~~~~g~~~~~~~~la~~le~~a~~d~~~~~k~l~pNVDfysg~i~~~ 377 (427)
T 3msu_A 315 NTDPRATAMKKNCEEILAKLGHSDNPLLTVAKKLEEIALQDEFFIERKLFSNVDFYSGIILKA 377 (427)
T ss_dssp SCCHHHHHHHHHTHHHHHHGGGCSSHHHHHHHHHHHHHC------CCCCCBCHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhhcccccccCCCCChHHHHHHHHHH
Confidence 999999999999999998887 5899999999999999999999999999999999999974
No 4
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.1e-98 Score=768.48 Aligned_cols=349 Identities=32% Similarity=0.501 Sum_probs=302.7
Q ss_pred CCCCCCceEEEEeccCCeEEEeeeeeCCCccceecccccccCCCccceeecCCCcccceeeeeeeeEeCCCCeeEEccCC
Q 014050 48 PPGNLKGSLTVVDERTGKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYP 127 (431)
Q Consensus 48 ~~~~~~~~l~~~~~r~g~~~~~pi~~~~~~~~~d~~~l~~~~~~~g~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~ 127 (431)
+++++.+++|+ .|+.-..+.|+.+..+. ..+.|. .|||||.||++|+|+||+|||++|+|+||||+
T Consensus 14 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~------~~d~~~-~~~~Gl~gv~~~~t~Is~idg~~G~L~YRGy~ 79 (414)
T 3hwk_A 14 AQTQGPGSMTG-------PLAAARSVAATKSMTAP------TVDERP-DIKKGLAGVVVDTTAISKVVPQTNSLTYRGYP 79 (414)
T ss_dssp ------------------------------------------------CCCGGGTTCEEEEESSEEEETTTTEEEETTEE
T ss_pred CCCCCCCceee-------eHHHHHHhhCCcccCCc------cccCCC-CCCCCCCCCeeeeeeceEEeCCCCEEEECCeE
Confidence 45566778887 34444444344322222 236677 89999999999999999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHhCCCCCChhHHHHHHHHhhhhcCCCCCccc
Q 014050 128 IEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPAL 207 (431)
Q Consensus 128 I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~~~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~ 207 (431)
|+||+++++||||+||||+|+|||++|++.|+++|..++.+|+.+.++++.||+++|||++|++++++|++|+++..
T Consensus 80 I~dLa~~~~fEevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~v~~~i~~~p~~~hPM~~l~~~vsaL~~~~~~~~--- 156 (414)
T 3hwk_A 80 VQDLAARCSFEQVAFLLWRGELPTDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVVRTAISYLGAEDPDED--- 156 (414)
T ss_dssp HHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHHHHTCTTTT---
T ss_pred HHHHHhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcCCccc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988763
Q ss_pred cCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Q 014050 208 KGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFIL 287 (431)
Q Consensus 208 ~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~lsy~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LIL 287 (431)
+++...++++|||||+|+|+|++||++.|+++++|++++||++|||+||++ ++|+|..+++||++|||
T Consensus 157 -------~~~~~~~~a~rLiAk~pti~a~~yr~~~g~~~~~p~~~ls~a~nfl~ml~g-----~~p~~~~~~~ld~~LiL 224 (414)
T 3hwk_A 157 -------DAAANRAKAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNFLHMCFG-----EVPETAVVSAFEQSMIL 224 (414)
T ss_dssp -------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHHS-----SCCCHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHhcC-----CCCCHHHHHHHHHHHhh
Confidence 134556789999999999999999999999999999999999999999986 47999999999999999
Q ss_pred hhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHHHHHHHhCCCCCHHHHHHHHhhcCCcccccCCCC
Q 014050 288 HAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRV 367 (431)
Q Consensus 288 hADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl~mL~eI~~~~~v~~~i~~~k~~~~rL~GFGHrV 367 (431)
|||||+||||||+|+++||++|+|+||+|||++||||+||||||+|++||++|++++++++||++.+++|++||||||||
T Consensus 225 hADHe~NaST~taRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~ei~~~~~~~~~v~~~l~~~~~I~GFGHrV 304 (414)
T 3hwk_A 225 YAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIEIGDPANAREWLRAKLARKEKIMGFGHRV 304 (414)
T ss_dssp TSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTTHHHHHHHHHHHHHCSGGGHHHHHHHHHHTTCCCTTBCCSS
T ss_pred ccCCCCChHHHHHHHHHhcCCCHHHHHHHHHHHhcCCccCChHHHHHHHHHHhCCchHHHHHHHHHHhcCCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHhcCcccccCCCcccccchHhhhccc
Q 014050 368 YKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 368 Yk~~DPRA~iL~~~a~el~~~~g~~~l~~iA~~Le~~a~~d~yf~~r~LyPNVDfysg~i~~~ 430 (431)
||++|||+++|+++|+++.+..|.+|++++|.+||+++.+ .|+||||||||||+||+.
T Consensus 305 yk~~DPRa~~L~~~a~~l~~~~g~~~~~~~a~~le~~~~~-----~k~l~pNVDf~sg~i~~~ 362 (414)
T 3hwk_A 305 YRHGDSRVPTMKRALERVGTVRDGQRWLDIYQVLAAEMAS-----ATGILPNLDFPTGPAYYL 362 (414)
T ss_dssp CSSCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-----HHCCCBCTHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-----hcCCCCchHHHHHHHHHH
Confidence 9999999999999999998888888999999999999976 499999999999999963
No 5
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=100.00 E-value=1.2e-98 Score=765.46 Aligned_cols=318 Identities=30% Similarity=0.482 Sum_probs=290.3
Q ss_pred ccceeecCCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHH
Q 014050 92 KGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQG 171 (431)
Q Consensus 92 ~g~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~ 171 (431)
+|+.+|||||.||++|+|+||+|||++|+|+||||+|+||+++++||||+||||+|+|||++|+++|+++|.+++.+|++
T Consensus 2 ~~~~~~~~Gl~gv~~~~t~Is~idg~~g~L~YRGy~I~dLa~~~~feev~yLLl~G~lPt~~el~~f~~~l~~~~~lp~~ 81 (375)
T 3tqg_A 2 NAMTKTAKGLRGQSAGETSIATVGKEGHGLTYRGYRIEDLAANATFEEVAYLLLKNKLPTKSELDAYTKKLVNLRSLPPA 81 (375)
T ss_dssp --------------CCEESSEEECTTSCCEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCCHH
T ss_pred CCCcccCCccCCCeEeeeeceEEeCCCCEEEECCeeHHHHHhcCCHHHHHHHHHcCcCcCHHHHHHHHHHHHHccCCCHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCC
Q 014050 172 ILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSN 251 (431)
Q Consensus 172 v~~~~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~ 251 (431)
+.+++++||+++|||++|++++++|++|+++.+ .+...++++|||||+|+|+|++||++.|.++++|++
T Consensus 82 ~~~~~~~~p~~~hpM~~l~~~v~aL~~~~~~~~-----------~~~~~~~a~~LiAk~p~i~a~~yr~~~g~~~i~p~~ 150 (375)
T 3tqg_A 82 LKDTLERIPASSHPMDVMRTGCSMLGNLEPENG-----------FENEQNIADRLVAIFPAIQCYWYHYSHHGKRIDTEL 150 (375)
T ss_dssp HHHHHHTSCTTSCHHHHHHHHHHHHHHHSCCCS-----------GGGHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred HHHHHHhCCCCCChHHHHHHHHHHHHhcCCCCC-----------hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCC
Confidence 999999999999999999999999999998763 123456789999999999999999999999999998
Q ss_pred C-CCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChH
Q 014050 252 N-LSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGAN 330 (431)
Q Consensus 252 ~-lsy~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAn 330 (431)
+ +||++|||+||++ .+|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||++||||+|||||
T Consensus 151 ~~ls~a~nfl~ml~g-----~~p~~~~~~~ld~~Lil~ADHe~n~St~tarvvaSt~ad~ysavaagi~aL~GplHGGAn 225 (375)
T 3tqg_A 151 DDLTLAGYFLHLLLG-----KKAAQMAIDCMNASLILYAEHEFNASTFAARVCSATLSDIYSAVTAAIATLRGPLHGGAN 225 (375)
T ss_dssp CCSSHHHHHHHHHHS-----SCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSHHHHCHH
T ss_pred ccccHHHHHHHHhcC-----CCCCHHHHHHHHHHHHHhccCCCCHHHHHHHHHHccCCCHHHHHHHHHHhccCcccCCHH
Confidence 7 9999999999986 478999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHhhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHhcCcc
Q 014050 331 EAVLKMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEY 410 (431)
Q Consensus 331 eavl~mL~eI~~~~~v~~~i~~~k~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~~g~~~l~~iA~~Le~~a~~d~y 410 (431)
|+|++||++|++++++++||++.+++|++||||||||||++|||+++|+++|+++.+..+.++++++|.+||+++.+
T Consensus 226 e~v~~ml~~i~~~~~~~~~v~~~~~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~l~~~~~~~~~~~~a~~le~~~~~--- 302 (375)
T 3tqg_A 226 EAAMDLIMLYKTPSEAIAGIKRKLANKELIMGFGHAVYRERDPRNAIIKSWAQKLAPNAADGYLFDISDAIENTMQD--- 302 (375)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHTTTSTTTHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHhcChhHHHHHHHHHHhcCCCccCCCCCCCCCCCccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH---
Confidence 99999999999888999999999999999999999999999999999999999997777788999999999999976
Q ss_pred cccCCCcccccchHhhhccc
Q 014050 411 FVKRKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 411 f~~r~LyPNVDfysg~i~~~ 430 (431)
+|+||||||||||+||+.
T Consensus 303 --~k~l~pNVDf~sg~i~~~ 320 (375)
T 3tqg_A 303 --EKKLFPNLDFYSATAYHF 320 (375)
T ss_dssp --HHCCCBCHHHHHHHHHHH
T ss_pred --hcCCCCChHHHHHHHHHH
Confidence 499999999999999973
No 6
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=100.00 E-value=2.2e-97 Score=757.76 Aligned_cols=320 Identities=36% Similarity=0.624 Sum_probs=303.7
Q ss_pred ceeecCCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHH
Q 014050 94 LKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGIL 173 (431)
Q Consensus 94 ~~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~ 173 (431)
+++|||||.||++|+|+||+|||++|+|+||||||+||+++++||||+||||+|+|||++|+++|+.+|..++.+|+.+.
T Consensus 1 ~~~~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~feeva~LL~~G~lPt~~el~~f~~~l~~~~~lp~~~~ 80 (377)
T 1o7x_A 1 MSVVSKGLENVIIKVTNLTFIDGEKGILRYRGYNIEDLVNYGSYEETIYLMLYGKLPTKKELNDLKAKLNEEYEVPQEVL 80 (377)
T ss_dssp --CBCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCCHHHH
T ss_pred CCCCCcccCCCeeeeeeCeEEECCCCEEEECCccHHHHHcCCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCC
Q 014050 174 DIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNL 253 (431)
Q Consensus 174 ~~~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~l 253 (431)
++++.||+++|||.+|++++++|++|+++.+ +++...+++++||||+|+|+|++||++.|+++++|++++
T Consensus 81 ~~~~~~p~~~hpM~~l~~~v~~l~~~~~~~~----------~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~l 150 (377)
T 1o7x_A 81 DTIYLMPKEADAIGLLEVGTAALASIDKNFK----------WKENDKEKAISIIAKMATLVANVYRRKEGNKPRIPEPSD 150 (377)
T ss_dssp HHHHHSCTTSCHHHHHHHHHHHHHHHCCCCC----------SSSSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCS
T ss_pred HHHHhCcccCCcHHHHHHHHHHHhhcCCCcC----------CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 9999999999999999999999999988652 123346689999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHH
Q 014050 254 SYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAV 333 (431)
Q Consensus 254 sy~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneav 333 (431)
||++|||+||++. +|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||+|||||+||||||+|
T Consensus 151 s~a~nfl~ml~g~-----~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v 225 (377)
T 1o7x_A 151 SFAKSFLLASFAR-----EPTTDEINAMDKALILYTDHEVPASTTAALVAASTLSDMYSSLTAALAALKGPLHGGAAEEA 225 (377)
T ss_dssp CHHHHHHHHHHSS-----CCCHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHHHHH
T ss_pred CHHHHHHHHHhCC-----CCCHHHHHHHHHHHHHhccCCCChHHHHHHHHHhcCCcHHHHHHHHHHhcCCCCCCChHHHH
Confidence 9999999999973 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHh-hcCCcccccCCCCCCCCCchHHHHHHHHHHHHHhhCC-CcHHHHHHHHHHHHhcCccc
Q 014050 334 LKMLNEIGTVENIPEFIEGVK-NRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGR-DPLIEVAVALEKAALSDEYF 411 (431)
Q Consensus 334 l~mL~eI~~~~~v~~~i~~~k-~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~~g~-~~l~~iA~~Le~~a~~d~yf 411 (431)
++||++|++++++++||++.+ ++|++||||||||||++|||+++|+++|+++.++.|. ++++++|.+||+++.+ ||
T Consensus 226 ~~ml~ei~~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~l~~~~~~~~~~~~~a~~le~~~~~--~~ 303 (377)
T 1o7x_A 226 FKQFIEIGDPNRVQNWFNDKVVNQKNRLMGFGHRVYKTYDPRAKIFKKLALTLIERNADARRYFEIAQKLEELGIK--QF 303 (377)
T ss_dssp HHHHHHHCSGGGHHHHHHHHTTTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--HH
T ss_pred HHHHHHhCChhHHHHHHHHHHHhcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH--HH
Confidence 999999999999999999999 9999999999999999999999999999999877676 7899999999999987 99
Q ss_pred ccCCCcccccchHhhhccc
Q 014050 412 VKRKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 412 ~~r~LyPNVDfysg~i~~~ 430 (431)
++|+||||||||||+||+.
T Consensus 304 ~~k~l~pNVD~~sg~v~~~ 322 (377)
T 1o7x_A 304 SSKGIYPNTDFYSGIVFYA 322 (377)
T ss_dssp TTTTCCBCTTTTHHHHHHH
T ss_pred hhcCCCCChHHHHHHHHHH
Confidence 9999999999999999973
No 7
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=5.5e-97 Score=755.08 Aligned_cols=319 Identities=34% Similarity=0.580 Sum_probs=304.1
Q ss_pred eeecCCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHH
Q 014050 95 KLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILD 174 (431)
Q Consensus 95 ~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~ 174 (431)
++|||||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+.+|..++.+|+.+.+
T Consensus 3 ~~~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~ 82 (378)
T 1vgm_A 3 VEVSRGLENVIIKTTGLTYIDGINGILRYRGYDINDLVNYASYEELIHLMLYGELPNRQQLNQIKGIINESFEVPEQVIS 82 (378)
T ss_dssp CCCSGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCCHHHHH
T ss_pred cccCCccCCCeeeeeeceEEECCCCeEEEcCeeHHHHHhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCCHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCC
Q 014050 175 IIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLS 254 (431)
Q Consensus 175 ~~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~ls 254 (431)
+++.||+++|||.+|++++++|++|+++.. +++...++++|||||+|+|+|++||++.|+++++|++++|
T Consensus 83 ~~~~~p~~~hpM~~l~~~v~~l~~~~~~~~----------~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls 152 (378)
T 1vgm_A 83 TIFSMPRNCDAIGMMETAFGILASIYDPKW----------NRATNKELAVQIIAKTATITANIYRAKEGLKPKIPEPSES 152 (378)
T ss_dssp HHTTSCTTSCHHHHHHHHHHHHHHHHCCCC----------CTTTHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSC
T ss_pred HHHhCCCCCCcHHHHHHHHHHHhccCCccC----------CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 999999999999999999999999987652 1234467899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHH
Q 014050 255 YSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVL 334 (431)
Q Consensus 255 y~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl 334 (431)
|++|||+||++. +|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||+|||||+||||||+|+
T Consensus 153 ~a~nfl~ml~g~-----~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~v~ 227 (378)
T 1vgm_A 153 YAESFLAATFGK-----KPTQEEIKAMDASLILYTDHEVPASTTAALVASSTLSDMYSCIVAALAALKGPLHGGAAEEAF 227 (378)
T ss_dssp HHHHHHHHHHSS-----CCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHHHH
T ss_pred HHHHHHHHHhCC-----CCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCcHHHHHHHHHHhccCCCCCChHHHHH
Confidence 999999999973 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHh-hcCCcccccCCCCCCCCCchHHHHHHHHHHHHHhhC-CCcHHHHHHHHHHHHhcCcccc
Q 014050 335 KMLNEIGTVENIPEFIEGVK-NRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVG-RDPLIEVAVALEKAALSDEYFV 412 (431)
Q Consensus 335 ~mL~eI~~~~~v~~~i~~~k-~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~~g-~~~l~~iA~~Le~~a~~d~yf~ 412 (431)
+||++|++++++++||++.+ ++|++||||||||||++|||+++|+++|+++.+..| .++++++|.+||+++.+ ||+
T Consensus 228 ~ml~ei~~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~~~~~--~~~ 305 (378)
T 1vgm_A 228 KQFVEIGSVENADKWFEEKIIKGKSRLMGFGHRVYKTYDPRAKIFKTLAKSFAEKNENVKKYYEIAERIEKLGVD--TFG 305 (378)
T ss_dssp HHHHHHCSGGGHHHHHHHHTTTSCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--HHG
T ss_pred HHHHHhCCHhHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH--HHh
Confidence 99999999999999999999 999999999999999999999999999999987767 67999999999999987 999
Q ss_pred cCCCcccccchHhhhccc
Q 014050 413 KRKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 413 ~r~LyPNVDfysg~i~~~ 430 (431)
+|+||||||||||+||+.
T Consensus 306 ~k~l~pNVDf~sg~i~~~ 323 (378)
T 1vgm_A 306 SKHIYPNTDFYSGIVFYA 323 (378)
T ss_dssp GGTCCBCTTTTHHHHHHH
T ss_pred hCCCCCChHHHHHHHHHH
Confidence 999999999999999974
No 8
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=100.00 E-value=1.2e-96 Score=756.02 Aligned_cols=317 Identities=30% Similarity=0.501 Sum_probs=288.8
Q ss_pred eecCCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHHH
Q 014050 96 LYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDI 175 (431)
Q Consensus 96 ~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~~ 175 (431)
.|||||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+++|.+++.+|+.+.++
T Consensus 32 ~~~~Gl~gv~~~~T~Is~idg~~g~L~YRGy~I~dLa~~~~fEevayLLl~G~LPt~~el~~f~~~l~~~~~lp~~~~~~ 111 (404)
T 3o8j_A 32 KKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAEHCEFEEVAHLLIHGKLPTRDELNAYKSKLKALRGLPANVRTV 111 (404)
T ss_dssp ---------CCCEESSEEECC-CCCEEETTEEHHHHHHHCCHHHHHHHHHTSSCCCHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred CCCCCCCCceEeeeeceeeeCCCCEEEECCeEHHHHHhcCCHHHHHHHHHcCcCCCHHHHHHHHHHHHHccCCCHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCC-CCCCC
Q 014050 176 IQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLP-SNNLS 254 (431)
Q Consensus 176 ~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p-~~~ls 254 (431)
+++||+++|||++|++++++|++|+++... + +.+...++++|||||+|+|+|++||++.|.+++.| ++++|
T Consensus 112 ~~~~p~~~hPM~~L~~~vsaL~~~~~~~~d------~--~~~~~~~~a~rLiAk~pti~a~~yr~~~g~~~i~~~~~~ls 183 (404)
T 3o8j_A 112 LEALPAASHPMDVMRTGVSALGCTLPEKEG------H--TVSGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDS 183 (404)
T ss_dssp HHTSCTTSCHHHHHHHHHHHHHHHSCCCTT------C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCSS
T ss_pred HHhCCCCCChHHHHHHHHHHHHhcCccccc------C--CcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCC
Confidence 999999999999999999999999988641 1 22333556789999999999999999888777765 48999
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHH
Q 014050 255 YSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVL 334 (431)
Q Consensus 255 y~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl 334 (431)
|++|||+||++ .+|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||++||||+||||||+|+
T Consensus 184 ~a~nfl~ml~g-----~~p~~~~~~~ld~~LiLhADHe~N~St~taRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~ 258 (404)
T 3o8j_A 184 IGGHFLHLLHG-----EKPTQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSDVYSAIIGAIGALRGPKHGGANEVSL 258 (404)
T ss_dssp HHHHHHHHHHS-----SCCCHHHHHHHHHHHHHTSCCSSSHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTTCHHHHHH
T ss_pred HHHHHHHHhcC-----CCCCHHHHHHHHHHHhhccCCCCChHHHHHHHHHhcCCCHHHHHHHHHHHccCCCcCCHHHHHH
Confidence 99999999986 4789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHhhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHhcCcccccC
Q 014050 335 KMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKR 414 (431)
Q Consensus 335 ~mL~eI~~~~~v~~~i~~~k~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~~g~~~l~~iA~~Le~~a~~d~yf~~r 414 (431)
+||++|++++++++||++.+++|++||||||||||++|||+++|+++|+++++..|.++++++|.+||+++.+ +|
T Consensus 259 ~ml~~i~~~~~~~~~v~~~l~~~~~I~GFGHrVyk~~DPRa~~l~~~a~~l~~~~g~~~~~~~a~~le~~~~~-----~k 333 (404)
T 3o8j_A 259 EIQQRYETPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSEEGGSLKMYHIADRLETVMWE-----TK 333 (404)
T ss_dssp HHHTTCSSHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH-----HH
T ss_pred HHHHHhcCchhHHHHHHHHHhcCCcccCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-----hc
Confidence 9999999889999999999999999999999999999999999999999998888889999999999999854 69
Q ss_pred CCcccccchHhhhccc
Q 014050 415 KLYPNVDFYSGLIYRY 430 (431)
Q Consensus 415 ~LyPNVDfysg~i~~~ 430 (431)
+||||||||||+||+.
T Consensus 334 ~l~pNVDf~sg~i~~~ 349 (404)
T 3o8j_A 334 KMFPNLDWFSAVSYNM 349 (404)
T ss_dssp CCCBCTTTHHHHHHHH
T ss_pred CCCcChHHHHHHHHHH
Confidence 9999999999999973
No 9
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=100.00 E-value=6.6e-96 Score=746.90 Aligned_cols=321 Identities=40% Similarity=0.645 Sum_probs=304.3
Q ss_pred eeecCCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHH
Q 014050 95 KLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILD 174 (431)
Q Consensus 95 ~~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~ 174 (431)
+++||||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+.+|..++.+|+.+.+
T Consensus 1 ~~~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~ 80 (377)
T 1iom_A 1 MEVARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKSSFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLE 80 (377)
T ss_dssp --CCGGGTTCCCSCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCCHHHHH
T ss_pred CCCCcccCCCeeeeeeCeEEECCCCEEEEcCeeHHHHHccCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHcCCCCHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCC
Q 014050 175 IIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLS 254 (431)
Q Consensus 175 ~~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~ls 254 (431)
+++.||+++|||.+|++++++|++|+++.. + .+++...+++++||+|+|+|+|++||++.|+++++|++++|
T Consensus 81 ~~~~~p~~~hpM~~l~~~v~~l~~~~~~~~------~--~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls 152 (377)
T 1iom_A 81 SFKRYPVSAHPMSFLRTAVSEFGMLDPTEG------D--ISREALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLS 152 (377)
T ss_dssp HHTTSCTTSCHHHHHHHHHHHHHHTCTTTT------C--CSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSC
T ss_pred HHHhCCcCCCchhHHHHHHHHHhccCCCcc------c--CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC
Confidence 999999999999999999999999987652 1 13455677899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHH
Q 014050 255 YSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVL 334 (431)
Q Consensus 255 y~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl 334 (431)
|++|||+|+++ .+|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||+|||||+||||||+|+
T Consensus 153 ~a~nfl~ml~g-----~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~v~ 227 (377)
T 1iom_A 153 HAANFLYMANG-----VEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVM 227 (377)
T ss_dssp HHHHHHHHHHS-----SCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHHHHH
T ss_pred HHHHHHHHhcC-----CCCCHHHHHHHHHHHHHhccCCCCchHHHHHHHhhcCCcHHHHHHHHHHHcccCccCChhHHHH
Confidence 99999999986 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHhhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHhcCcccccC
Q 014050 335 KMLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKR 414 (431)
Q Consensus 335 ~mL~eI~~~~~v~~~i~~~k~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~~g~~~l~~iA~~Le~~a~~d~yf~~r 414 (431)
+||++|++++++++||++.+++|++||||||||||++|||+++|+++|+++.++.|.++++++|.+||+++.+ +|| .|
T Consensus 228 ~ml~ei~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~a~~le~~~~~-~~~-~k 305 (377)
T 1iom_A 228 RMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGK-VLN-PR 305 (377)
T ss_dssp HHHHHHCSHHHHHHHHHHHHHTTCCCTTBSCSSCSSCCTTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-HHT-TT
T ss_pred HHHHHhcCchhHHHHHHHHHHCCCcccCCCCcccCCCCCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH-Hhc-cC
Confidence 9999999989999999999999999999999999999999999999999998888888999999999999977 588 89
Q ss_pred CCcccccchHhhhccc
Q 014050 415 KLYPNVDFYSGLIYRY 430 (431)
Q Consensus 415 ~LyPNVDfysg~i~~~ 430 (431)
+||||||||||+||+.
T Consensus 306 ~l~pNVD~~sg~i~~~ 321 (377)
T 1iom_A 306 GIYPNVDFYSGVVYSD 321 (377)
T ss_dssp TCCBCHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHH
Confidence 9999999999999963
No 10
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=100.00 E-value=4e-96 Score=754.73 Aligned_cols=327 Identities=39% Similarity=0.654 Sum_probs=307.3
Q ss_pred ecCCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHHHH
Q 014050 97 YDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDII 176 (431)
Q Consensus 97 ~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~~~ 176 (431)
+||||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+.+|..++.+|+.+.+++
T Consensus 22 ~~~Gl~gv~~~~t~Is~idg~~G~L~YRGy~i~dLa~~~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~~ 101 (409)
T 2ibp_A 22 IIHGLEDVLIKSTSISDIDGEKGILWYRGYRIEELARLSTYEEVSYLILYGRLPTKRELEDYINRMKKYRELHPATVEVI 101 (409)
T ss_dssp EEGGGTTCEEEEECSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred CCCCcCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCChhHHHHHHHHhhhhcCCCCCcc---ccCCCccc--chhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCC
Q 014050 177 QAMPHDAHPMGVLVSAMSALSIFHPDANPA---LKGQDIYK--SKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSN 251 (431)
Q Consensus 177 ~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~---~~g~~~~~--~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~ 251 (431)
+.||++ |||.+|++++++|++|+++.+.. .. .++++ +++...++++|||+|+|+|+|++||++.|+++++|++
T Consensus 102 ~~~p~~-hPM~~l~~~v~aL~~~~~~~~~~~~~~~-~g~~k~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~ 179 (409)
T 2ibp_A 102 RNLAKA-HPMFALEAAVAAEGAYDEDNQKLIEALS-VGRYKAEEKELAYRIAEKLVAKMPTIVAYHYRFSRGLEVVRPRD 179 (409)
T ss_dssp HHTTTS-CHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCT
T ss_pred HhCCcc-CchHHHHHHHHHHhccCccccchhhhhh-cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC
Confidence 999999 99999999999999998764211 00 12232 3455677899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHH
Q 014050 252 NLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANE 331 (431)
Q Consensus 252 ~lsy~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAne 331 (431)
++||++|||+||++ .+|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||+|||||+||||||
T Consensus 180 ~ls~a~nfl~ml~g-----~~p~~~~~~~ld~~LvL~ADHg~naST~aaRv~aSt~ad~~savaagi~aL~GplHGGAne 254 (409)
T 2ibp_A 180 DLGHAANFLYMMFG-----REPDPLASRGIDLYLILHADHEVPASTFAAHVVASTLSDLYSSVAAAIAALKGPLHGGANE 254 (409)
T ss_dssp TSCHHHHHHHHHHS-----SCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHH
T ss_pred CCCHHHHHHHHHhC-----CCCCHHHHHHHHHHHHHhcCCCCChhHHHHHHHhhcCCcHHHHHHHHHHHccCCccCCchH
Confidence 99999999999996 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHhhc-CCcccccCCCCCCCCCchHHHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHhcCc
Q 014050 332 AVLKMLNEIGTVENIPEFIEGVKNR-KRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRD-PLIEVAVALEKAALSDE 409 (431)
Q Consensus 332 avl~mL~eI~~~~~v~~~i~~~k~~-~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~~g~~-~l~~iA~~Le~~a~~d~ 409 (431)
+|++||++|++++++++||++.+++ |++||||||||||++|||+++|+++|++++++.|.+ +++++|++||+++++++
T Consensus 255 ~v~~ml~ei~~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~g~~~~~a~~le~~~l~~~ 334 (409)
T 2ibp_A 255 MAVRNYLEIGTPAKAKEIVEAATKPGGPKLMGVGHRVYKAYDPRAKIFKEFSRDYVAKFGDPQNLFAIASAIEQEVLSHP 334 (409)
T ss_dssp HHHHHHHHHCCGGGHHHHHHHHTSTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHCCTTCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhcCCcCcCCCccccCCCCCchHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHccch
Confidence 9999999999999999999999998 999999999999999999999999999998888876 99999999999999999
Q ss_pred ccccCCCcccccchHhhhccc
Q 014050 410 YFVKRKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 410 yf~~r~LyPNVDfysg~i~~~ 430 (431)
||++|+||||||||||+||+.
T Consensus 335 ~~~~k~l~pNVDf~sg~i~~~ 355 (409)
T 2ibp_A 335 YFQQRKLYPNVDFWSGIAFYY 355 (409)
T ss_dssp HHHHTTCCBCGGGTHHHHHHH
T ss_pred hhhhcCCCCChHHHHHHHHHH
Confidence 999999999999999999963
No 11
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=100.00 E-value=9e-96 Score=747.70 Aligned_cols=319 Identities=30% Similarity=0.553 Sum_probs=302.8
Q ss_pred eecCCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhh-cCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHH
Q 014050 96 LYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAE-SSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILD 174 (431)
Q Consensus 96 ~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~-~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~ 174 (431)
.|||||.||++|+|+||+|||++|+|+||||+|+|||+ +++||||+||||+|+|||++|+++|+.+|..++.+|+.+.+
T Consensus 6 ~~~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~ 85 (385)
T 2ifc_A 6 EISKGLEDVNIKWTRLTTIDGNKGILRYGGYSVEDIIASGAQDEEIQYLFLYGNLPTEQELRKYKETVQKGYKIPDFVIN 85 (385)
T ss_dssp CBCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHTTCCHHHHHHHHHHSSCCCHHHHHHHHHHHHGGGCCCHHHHH
T ss_pred CCCCCcCCCeeeeeeCeEEECCCCEEEECCccHHHHHhcCCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHH
Confidence 38999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCC
Q 014050 175 IIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLS 254 (431)
Q Consensus 175 ~~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~ls 254 (431)
+++.||+++|||.+|++++++|++|+++.+ .+++...+++++||+|+|+|+|++||++.|+++++|++++|
T Consensus 86 ~~~~~p~~~hpM~~l~~~v~~l~~~~~~~~---------~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls 156 (385)
T 2ifc_A 86 AIRQLPRESDAVAMQMAAVAAMAASETKFK---------WNKDTDRDVAAEMIGRMSAITVNVYRHIMNMPAELPKPSDS 156 (385)
T ss_dssp HHHTSCTTSCHHHHHHHHHHHHHHHCTTCC---------CCTTTHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSC
T ss_pred HHHhCCCCCCchHHHHHHHHHHHhcCCccc---------CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 999999999999999999999999988652 12334567899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHH
Q 014050 255 YSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVL 334 (431)
Q Consensus 255 y~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl 334 (431)
|++|||+|+++. +|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||++||||+||||||+|+
T Consensus 157 ~a~nfl~ml~g~-----~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~ 231 (385)
T 2ifc_A 157 YAESFLNAAFGR-----KATKEEIDAMNTALILYTDHEVPASTTAGLVAVSTLSDMYSGITAALAALKGPLHGGAAEAAI 231 (385)
T ss_dssp HHHHHHHHHHTS-----CCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSSHHHHHH
T ss_pred HHHHHHHHHhCC-----CCCHHHHHHHHHHHhHhcCCCccHHHHHHHHHHhcCCcHHHHHHHHHHHccCCccCChHHHHH
Confidence 999999999963 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHh-hcCCcccccCCCCCCCCCchHHHHHHHHHHHHHh-hCCCcHHHHHHHHHHHHhcCcccc
Q 014050 335 KMLNEIGTVENIPEFIEGVK-NRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSI-VGRDPLIEVAVALEKAALSDEYFV 412 (431)
Q Consensus 335 ~mL~eI~~~~~v~~~i~~~k-~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~-~g~~~l~~iA~~Le~~a~~d~yf~ 412 (431)
+||++|++++++++||++.+ ++|++||||||||||++|||+++|+++|+++.+. .+.++++++|.+||+++.+ ||+
T Consensus 232 ~ml~ei~~~~~~~~~i~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~~~~~--~~~ 309 (385)
T 2ifc_A 232 AQFDEIKDPAMVEKWFNDNIINGKKRLMGFGHRVYKTYDPRAKIFKGIAEKLSSKKPEVHKVYEIATKLEDFGIK--AFG 309 (385)
T ss_dssp HHHHHHCSGGGHHHHHHHHTTTSSSCCTTBCCSSCSSCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH--HHG
T ss_pred HHHHHhCCHHHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHH--HHh
Confidence 99999999999999999999 9999999999999999999999999999999765 5567999999999999987 999
Q ss_pred cCCCcccccchHhhhccc
Q 014050 413 KRKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 413 ~r~LyPNVDfysg~i~~~ 430 (431)
+|+||||||||||+||+.
T Consensus 310 ~k~l~pNVD~~sg~v~~~ 327 (385)
T 2ifc_A 310 SKGIYPNTDYFSGIVYMS 327 (385)
T ss_dssp GGTCCBCTTTTHHHHHHH
T ss_pred hcCCCCChHHHHHHHHHH
Confidence 999999999999999963
No 12
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.9e-95 Score=742.85 Aligned_cols=316 Identities=38% Similarity=0.635 Sum_probs=301.0
Q ss_pred eecCCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHHH
Q 014050 96 LYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDI 175 (431)
Q Consensus 96 ~~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~~ 175 (431)
.+||||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+.+|..++.+|+.+.++
T Consensus 2 ~~~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~ 81 (373)
T 1vgp_A 2 EIKKGLEDVYVKETEITYIDGELGRLYYRGYSIYDLAEFSNFEEVSYLILYGKLPNREELNWFQEKLREERYLPDFIIKF 81 (373)
T ss_dssp CCCTTCTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred CCCCccCCCeeeeeeCeEEECCCCEEEEcCeeHHHHHccCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCCH
Q 014050 176 IQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSY 255 (431)
Q Consensus 176 ~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~lsy 255 (431)
++.||+++|||.+|++++++|++|++ .+ ++...+++++||+|+|+|+|++||++.|+++++|++++||
T Consensus 82 ~~~~p~~~hpM~~l~~~v~~l~~~~~-~~-----------~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls~ 149 (373)
T 1vgp_A 82 LREVRKDAQPMDILRTAVSLLGIEDS-KN-----------DERTDIKGIKLISKFPTIVANYARLRKGLDIIEPDPKLSH 149 (373)
T ss_dssp HHHSCTTSCHHHHHHHHHHHHHHHCC-CC-----------SSCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCH
T ss_pred HHhCCCCCChHHHHHHHHHHHhccCC-CC-----------hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCH
Confidence 99999999999999999999999987 42 1123457899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHHH
Q 014050 256 SENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLK 335 (431)
Q Consensus 256 ~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl~ 335 (431)
++|||+||++ .+|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||+|||||+||||||+|++
T Consensus 150 a~nfl~ml~g-----~~p~~~~~~~ld~~Lvl~ADHg~n~ST~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v~~ 224 (373)
T 1vgp_A 150 SENFLYMLYG-----DRPNEIKSKAMDVTLILHIDHEMNASTFASLVVASTFSDLYSSIVAGISALKGPLHGGANYEALK 224 (373)
T ss_dssp HHHHHHHHHS-----SCCCHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHTCTTSSSCCCHHHH
T ss_pred HHHHHHHhcC-----CCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHhcCccHHHHHHHHHHhcCCCCcCCHHHHHHH
Confidence 9999999986 36899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCHHHHHHHHhhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHhhCCC--cHHHHHHHHHHHHhcCccccc
Q 014050 336 MLNEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRD--PLIEVAVALEKAALSDEYFVK 413 (431)
Q Consensus 336 mL~eI~~~~~v~~~i~~~k~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~~g~~--~l~~iA~~Le~~a~~d~yf~~ 413 (431)
||++|++++++++||++.+++|++||||||||||++|||+++|+++|++++++.|.+ +++++|.+||+++.+ ||+.
T Consensus 225 ml~~i~~~~~~~~~i~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~~~a~~le~~~~~--~~~~ 302 (373)
T 1vgp_A 225 MFKEIGSPEKVNDYILNRLSNKQRIMGFGHRVYKTYDPRARILKQYAKLLAEKEGGEIYTLYQIAEKVEEIGIK--YLGP 302 (373)
T ss_dssp HHHHSCSSSSHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHH--HHGG
T ss_pred HHHHhcCchhHHHHHHHHHHcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH--hccc
Confidence 999999999999999999999999999999999999999999999999998888876 899999999999764 8999
Q ss_pred CCCcccccchHhhhccc
Q 014050 414 RKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 414 r~LyPNVDfysg~i~~~ 430 (431)
|+||||||||||+||+.
T Consensus 303 k~l~pNVDf~sg~i~~~ 319 (373)
T 1vgp_A 303 KGIYPNVDFFSSIVFYS 319 (373)
T ss_dssp GTCCBCHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHH
Confidence 99999999999999974
No 13
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=100.00 E-value=2.7e-95 Score=738.83 Aligned_cols=311 Identities=36% Similarity=0.576 Sum_probs=296.8
Q ss_pred CCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHh
Q 014050 99 PGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQA 178 (431)
Q Consensus 99 pG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~~~~~ 178 (431)
|||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+.+|..++.+|+.+.++++.
T Consensus 3 ~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~~~ 82 (363)
T 2c6x_A 3 YGLKGITCVETSISHIDGEKGRLIYRGHHAKDIALNHSFEEAAYLILFGKLPSTEELQVFKDKLAAERNLPEHIERLIQS 82 (363)
T ss_dssp GGGTTCCCEEESSEEEETTTTEEEETTEEHHHHHHHSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CcCCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccCCHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCCHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCCHHHH
Q 014050 179 MPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSEN 258 (431)
Q Consensus 179 ~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~lsy~~N 258 (431)
||+++|||.+|++++++|++ ++.+ ++...+++++||+|+|+|+|++||++.|+++++|++++||++|
T Consensus 83 ~p~~~hpM~~l~~~v~~l~~--~~~~-----------~~~~~~~a~~Lia~~p~i~a~~~~~~~g~~~i~p~~~ls~a~n 149 (363)
T 2c6x_A 83 LPNNMDDMSVLRTVVSALGE--NTYT-----------FHPKTEEAIRLIAITPSIIAYRKRWTRGEQAIAPSSQYGHVEN 149 (363)
T ss_dssp SCSSSCHHHHHHHHHHHHCC--SSCC-----------SSCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCSHHH
T ss_pred CcccCCchHHHHHHHHhhcC--CCCC-----------hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCHHHH
Confidence 99999999999999999987 4321 1223567999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHHHHHH
Q 014050 259 FLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLN 338 (431)
Q Consensus 259 fL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl~mL~ 338 (431)
||+||++. +|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||++||||+||||||+|++||+
T Consensus 150 fl~ml~g~-----~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l~ 224 (363)
T 2c6x_A 150 YYYMLTGE-----QPSEAKKKALETYMILATEHGMNASTFSARVTLSTESDLVSAVTAALGTMKGPLHGGAPSAVTKMLE 224 (363)
T ss_dssp HHHHHHSS-----CCCHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred HHHHHcCC-----CCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHHhcCccHHHHHHHHHHHcccCccCCchHHHHHHHH
Confidence 99999963 5899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHhhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHhcC--cccccCCC
Q 014050 339 EIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSD--EYFVKRKL 416 (431)
Q Consensus 339 eI~~~~~v~~~i~~~k~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~~g~~~l~~iA~~Le~~a~~d--~yf~~r~L 416 (431)
+|++++++++||++.+++|++||||||||||++|||+++|+++|++++ |.+|+++++.+||+++.++ +||++|+|
T Consensus 225 ~i~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~---~~~~~~~~a~~le~~~~~~~g~yf~~k~l 301 (363)
T 2c6x_A 225 DIGEKEHAEAYLKEKLEKGERLMGFGHRVYKTKDPRAEALRQKAEEVA---GNDRDLDLALHVEAEAIRLLEIYKPGRKL 301 (363)
T ss_dssp TCCSSTTHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHTT---TSCHHHHHHHHHHHHHHHHHHHHSCSSCC
T ss_pred HhCChhhHHHHHHHHHHcCCcccCCCCcccCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhhccccccCCC
Confidence 999999999999999999999999999999999999999999999984 6789999999999999999 99999999
Q ss_pred cccccchHhhhccc
Q 014050 417 YPNVDFYSGLIYRY 430 (431)
Q Consensus 417 yPNVDfysg~i~~~ 430 (431)
|||||||||+||+.
T Consensus 302 ~pNVD~~sg~i~~~ 315 (363)
T 2c6x_A 302 YTNVEFYAAAVMRA 315 (363)
T ss_dssp CBCTHHHHHHHHHH
T ss_pred CcChHHHHHHHHHH
Confidence 99999999999974
No 14
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=7.2e-95 Score=736.95 Aligned_cols=307 Identities=39% Similarity=0.634 Sum_probs=286.9
Q ss_pred cCCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHHHHH
Q 014050 98 DPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQ 177 (431)
Q Consensus 98 dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~~~~ 177 (431)
.|||.||++|+|+||+|||++|+|+||||||+||+++++||||+||||+|+|||++|+++|+.+|..++.+|+.+.++++
T Consensus 3 ~~Gl~g~~~~~T~Is~id~~~G~L~YRGy~i~dLa~~~~feeva~LLl~G~lPt~~el~~f~~~l~~~~~lp~~~~~~~~ 82 (367)
T 2p2w_A 3 QKGLEGVKICESSICYLDGINGRLYYRGIPVEELAEKSTFEETAYFLWYGKLPTKSELEEFKRKMADYRELPAEALGILY 82 (367)
T ss_dssp CTTCTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHHHT
T ss_pred CCcCCCCeeeeeeCeEEECCCCEEEECCeeHHHHHcCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCCHHH
Q 014050 178 AMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSE 257 (431)
Q Consensus 178 ~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~lsy~~ 257 (431)
.||+++|||.+|++++++|++|+++ + +...+++++||+|+|+|+|++||++.|+++++|++++||++
T Consensus 83 ~~p~~~hpM~~l~~~v~~l~~~~~~--~-----------~~~~~~a~~lia~~p~i~a~~y~~~~g~~~i~p~~~l~~a~ 149 (367)
T 2p2w_A 83 HLPKNLHYIDVLKIFLSIHGSMDGN--D-----------EDLREKAIRVASVFPTILAYYYRYSKGKELIRPRKDLSHVE 149 (367)
T ss_dssp TSCSCCCHHHHHHHHHSCC--------------------CHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHH
T ss_pred hCccCCChHHHHHHHHHHHhccCCC--h-----------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHH
Confidence 9999999999999999999998765 1 22345799999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHHHHH
Q 014050 258 NFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKML 337 (431)
Q Consensus 258 NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl~mL 337 (431)
|||+||++. + |..+++||++||||||||+||||||+|+++||++|+|+||+|||+|||||+||||||+|++||
T Consensus 150 nfl~ml~~~------~-~~~~~~ld~~LvL~ADHg~NaSTftaRvvaSt~ad~ysavaagi~aL~GPlHGGAne~v~~ml 222 (367)
T 2p2w_A 150 NFYYMMFGE------R-NEKIRLLESAFILLMEQDINASTFAALVIASTLSDLYSCIVGALGALKGPLHGGASEKVPPML 222 (367)
T ss_dssp HHHHHHHSC------C-CTTHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHH
T ss_pred HHHHHhcCC------C-hHHHHHHHHHHhHhccCCCchHHHHHHHHHhcCccHHHHHHHHHHHccCCccCChHHHHHHHH
Confidence 999999963 2 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHhhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHhcCcccccCCCc
Q 014050 338 NEIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLY 417 (431)
Q Consensus 338 ~eI~~~~~v~~~i~~~k~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~~g~~~l~~iA~~Le~~a~~d~yf~~r~Ly 417 (431)
++|++++++++||++.+++|++||||||||||++|||+++|+++|+++ .|.++++++|++||+++.+ || .|+||
T Consensus 223 ~ei~~~~~~~~~i~~~l~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~~---~~~~~~~~~a~~le~~~~~--~~-~k~l~ 296 (367)
T 2p2w_A 223 EEIGSEDRVEEFVQKCLKEKRKIMGFGHRVYKTYDPRAVFLKRVLQEH---FPDSKLFRIASKLEEYIVS--NK-IKNIY 296 (367)
T ss_dssp HHHCSGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHH--TT-GGGCC
T ss_pred HHhcCchhHHHHHHHHHHcCCccccCCccccCCCCCchHHHHHHHHHh---cCCcHHHHHHHHHHHHHHH--Hh-ccCCC
Confidence 999999999999999999999999999999999999999999999997 5667999999999999765 77 89999
Q ss_pred ccccchHhhhccc
Q 014050 418 PNVDFYSGLIYRY 430 (431)
Q Consensus 418 PNVDfysg~i~~~ 430 (431)
||||||||+||+.
T Consensus 297 pNVDf~sg~v~~~ 309 (367)
T 2p2w_A 297 PNVDLYSSVLFEE 309 (367)
T ss_dssp BCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHH
Confidence 9999999999974
No 15
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=100.00 E-value=2.9e-94 Score=733.46 Aligned_cols=314 Identities=39% Similarity=0.651 Sum_probs=298.5
Q ss_pred CCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHHHHHh
Q 014050 99 PGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDIIQA 178 (431)
Q Consensus 99 pG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~~~~~ 178 (431)
|||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+.+|..++.+|+.+.++++.
T Consensus 3 ~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~~~ 82 (371)
T 1aj8_A 3 KGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELSTFEEVVYLLWWGKLPSLSELENFKKELAKSRGLPKEVIEIMEA 82 (371)
T ss_dssp GGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCcCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCCHHHH
Q 014050 179 MPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYSEN 258 (431)
Q Consensus 179 ~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~lsy~~N 258 (431)
||+++|||.+|++++++|++|+++.+. ..+++...+++++||+|+|+|+|++||++.|+++++|++++||++|
T Consensus 83 ~p~~~hpM~~l~~~v~~l~~~~~~~~~-------~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls~~~n 155 (371)
T 1aj8_A 83 LPKNTHPMGALRTIISYLGNIDDSGDI-------PVTPEEVYRIGISVTAKIPTIVANWYRIKNGLEYVPPKEKLSHAAN 155 (371)
T ss_dssp SCTTCCHHHHHHHHHHHHHHHSTTTTS-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHH
T ss_pred CCCCCChHHHHHHHHHHHhccCCcccc-------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHH
Confidence 999999999999999999999876521 0145556778999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHHHHHH
Q 014050 259 FLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKMLN 338 (431)
Q Consensus 259 fL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl~mL~ 338 (431)
||+||++ .+|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||++||||+||||||+|++||+
T Consensus 156 fl~ml~g-----~~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l~ 230 (371)
T 1aj8_A 156 FLYMLHG-----EEPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFM 230 (371)
T ss_dssp HHHHHHS-----SCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHH
T ss_pred HHHHhcC-----CCCCHHHHHHHHHHHhHhcCCCCChhHHHHHHHhhcCCcHHHHHHHHHHHcCCCccCCchHHHHHHHH
Confidence 9999986 36899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCHHHHHHHHhhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHhcCcccccCCCcc
Q 014050 339 EIGTVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALSDEYFVKRKLYP 418 (431)
Q Consensus 339 eI~~~~~v~~~i~~~k~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~~g~~~l~~iA~~Le~~a~~d~yf~~r~LyP 418 (431)
+|++++++++||++.+++|++||||||||||++|||+++|+++|+++ |.++++++|.+||+++.+ ||++|+|||
T Consensus 231 ~i~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~~~~~----~~~~~~~~a~~le~~~~~--~~~~k~l~p 304 (371)
T 1aj8_A 231 EIGSPEKVEEWFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKL----GDKKLFEIAERLERLVEE--YLSKKGISI 304 (371)
T ss_dssp HHCSGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHH----SCHHHHHHHHHHHHHHHH--HTTTTTCCB
T ss_pred HhcCchhHHHHHHHHHHcCCeeecCCccccCCCCccHHHHHHHHHHc----CCCHHHHHHHHHHHHHHH--hccCCCCCC
Confidence 99999999999999999999999999999999999999999999987 567999999999999765 899999999
Q ss_pred cccchHhhhccc
Q 014050 419 NVDFYSGLIYRY 430 (431)
Q Consensus 419 NVDfysg~i~~~ 430 (431)
|||||||+||+.
T Consensus 305 NVD~~sg~i~~~ 316 (371)
T 1aj8_A 305 NVDYWSGLVFYG 316 (371)
T ss_dssp CTTTTHHHHHHT
T ss_pred ChHHHHHHHHHH
Confidence 999999999974
No 16
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=100.00 E-value=2.6e-94 Score=735.96 Aligned_cols=316 Identities=33% Similarity=0.534 Sum_probs=300.7
Q ss_pred ecCCCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCCCCHHHHHHH
Q 014050 97 YDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSAVPQGILDII 176 (431)
Q Consensus 97 ~dpG~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~lpe~v~~~~ 176 (431)
|||||.||++|+|+||+|||++|+|+||||||+|||++++||||+||||+|+|||++|+++|+.+|..++.+|+.+.+++
T Consensus 5 ~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~lp~~~~~~~ 84 (378)
T 1a59_A 5 IHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKCSFEQVAYLLWNSELPNDSELKAFVNFERSHRKLDENVKGAI 84 (378)
T ss_dssp CCGGGTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHCCHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCSCCHHHHHHH
T ss_pred CCCccCCCeeeeeeceEEECCCCeEEEcCccHHHHHhcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHHHHHcCCCCCCCCCCCCHH
Q 014050 177 QAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAYLRMAGRPPVLPSNNLSYS 256 (431)
Q Consensus 177 ~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~yr~~~G~~~~~p~~~lsy~ 256 (431)
+.||+++|||.+|++++++|++|+++.. + .+++...+++++||+|+|+|+|++||++.|+++++|++++||+
T Consensus 85 ~~~p~~~hpM~~l~~~v~~l~~~~~~~~------~--~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~~~i~p~~~ls~a 156 (378)
T 1a59_A 85 DLLSTACHPMDVARTAVSVLGANHARAQ------D--SSPEANLEKAMSLLATFPSVVAYDQRRRRGEELIEPREDLDYS 156 (378)
T ss_dssp TTSCTTSCHHHHHHHHHHHHHHTCTTTT------C--CSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHH
T ss_pred HhCCCCCCcHHHHHHHHHHHHhcCCCcc------C--CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHH
Confidence 9999999999999999999999987652 1 1345567789999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhccCCCchhhhHHHhhccCCCHHHHHHHHhhcccCCcccChHHHHHHH
Q 014050 257 ENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEHEMNCSTSAARHLASSGVDVYTALAGAVGALYGPLHGGANEAVLKM 336 (431)
Q Consensus 257 ~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADHeln~ST~aaRvvaSt~ad~yaavaAgi~AL~GPlHGGAneavl~m 336 (431)
+|||+||++ .+|+|..+++||++||||||||+||||||+|+++||++|+|+||+|||++||||+||||||+|++|
T Consensus 157 ~nfl~ml~g-----~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~ 231 (378)
T 1a59_A 157 ANFLWMTFG-----EEAAPEVVEAFNVSMILYAEHSFNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHT 231 (378)
T ss_dssp HHHHHHHHS-----SCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHH
T ss_pred HHHHHHhcC-----CCCCHHHHHHHHHHHHHhcCCCCCchHHHHHHHhhcCCcHHHHHHHHHHHccCCccCCchHHHHHH
Confidence 999999986 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCC---------CCHHHHHHHHhhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHhc
Q 014050 337 LNEIGTV---------ENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSIVGRDPLIEVAVALEKAALS 407 (431)
Q Consensus 337 L~eI~~~---------~~v~~~i~~~k~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~~g~~~l~~iA~~Le~~a~~ 407 (431)
|++|++. +++++||++.+++|++||||||||||++|||+++|+++|+++++..|.+++++++.+||+++.+
T Consensus 232 l~~i~~~~~~~~~~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~~~~~~~~~~~~a~~le~~~~~ 311 (378)
T 1a59_A 232 FEEIGIRKDESLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSRVPTMKSALDAMIKHYDRPEMLGLYNGLEAAMEE 311 (378)
T ss_dssp HHHSCCCSSCCHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCccccchHHHHHHHHHHHHhCCCeeeCCCCcccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 9999887 7799999999999999999999999999999999999999998888888999999999999976
Q ss_pred CcccccCCCcccccchHhhhccc
Q 014050 408 DEYFVKRKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 408 d~yf~~r~LyPNVDfysg~i~~~ 430 (431)
+ |+||||||||||+||+.
T Consensus 312 ~-----k~l~pNVD~~sg~i~~~ 329 (378)
T 1a59_A 312 A-----KQIKPNLDYPAGPTYNL 329 (378)
T ss_dssp H-----HCCCBCTHHHHHHHHHH
T ss_pred H-----hCCCCChHHHHHHHHHH
Confidence 3 89999999999999974
No 17
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=100.00 E-value=1.2e-92 Score=733.73 Aligned_cols=329 Identities=27% Similarity=0.417 Sum_probs=295.6
Q ss_pred CccceeecC---CCcccceeeeeeeeEeCCCCeeEEccCCHHHHhhcC---------CHHHHHHHHHhCCCCCHHHHHHH
Q 014050 91 DKGLKLYDP---GYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESS---------SFLEVAYLLMYGNLPSESQLTDW 158 (431)
Q Consensus 91 ~~g~~~~dp---G~~~t~~~~S~IT~Idg~~G~L~YRGy~I~eLa~~~---------sFeEva~LL~~G~LPt~~ql~~f 158 (431)
.-|.+|+|+ ||.||++|+|+||+|||++| |+||||||+||++++ +||||+||||+|+|||++|++.|
T Consensus 30 ~~~~~t~~~~~~Gl~g~~~~~t~Is~id~~~G-l~YRGy~I~dLa~~~~~~~~~~~~~feev~yLLl~G~LPt~~el~~f 108 (435)
T 1csh_A 30 AVGQITVDMSYGGMRGMKGLIYETSVLDPDEG-IRFRGFSIPECQKLLPKAGGGEEPLPEGLFWLLVTGQIPTPEQVSWV 108 (435)
T ss_dssp CCCCCCHHHHHTTTTTCCCCCCCSEEEETTTE-EEETTEEHHHHHHHSCBCTTCCSBCHHHHHHHHHHSSCCCHHHHHHH
T ss_pred ccccccccccccCcCCCeeeeeeeeEEcCCCC-eeECCccHHHHHhhCcccccCCcCCHHHHHHHHHcCCCCCHHHHHHH
Confidence 448889888 99999999999999999999 799999999999986 69999999999999999999999
Q ss_pred HHHHhhcCCCCHHHHHHHHhCCCCCChhHHHHHHHHhhhhcCCCCCccccCCCcccchhHhHHHHHHHHhhhhHHHHHHH
Q 014050 159 EFAVSQHSAVPQGILDIIQAMPHDAHPMGVLVSAMSALSIFHPDANPALKGQDIYKSKQVRDKQIARILGKAPTIAAAAY 238 (431)
Q Consensus 159 ~~~l~~~~~lpe~v~~~~~~~p~~ahPM~~L~a~vsaLs~~~~~~~~~~~g~~~~~~~~~~~~~~~rllakiptiaA~~y 238 (431)
+..|..++.+|+.+.++++.||+++|||.+|++++++|+++++.......+.+....++...++++|||||+|+|+|++|
T Consensus 109 ~~~l~~~~~lp~~v~~~i~~~p~~~hPM~~l~~~v~aL~~~~~f~~~~~~~~~~~~~~~~~~~~a~~LiAk~p~iaa~~y 188 (435)
T 1csh_A 109 SKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGINRTKYWEFVYEDAMDLIAKLPCVAAKIY 188 (435)
T ss_dssp HHHHHHHCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHGGGGCHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHhCCccCChHHHHHHHHHHHhhcccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997421100000001001235567789999999999999999
Q ss_pred HHHcCC--CCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhcc-CCCchhhhHHHhhccCCCHHHHHH
Q 014050 239 LRMAGR--PPVLPSNNLSYSENFLYMLDSLGNRAYKPNPRLARVLDVLFILHAEH-EMNCSTSAARHLASSGVDVYTALA 315 (431)
Q Consensus 239 r~~~G~--~~~~p~~~lsy~~NfL~ml~~~~~~~~~~~p~~~~aLd~~LILhADH-eln~ST~aaRvvaSt~ad~yaava 315 (431)
|++.|. ++++|++++||++|||+||++ |+|..+++||++||||||| |+||||||+|+++||++|+|+||+
T Consensus 189 r~~~~~~~~~i~p~~~ls~a~nfl~ml~~-------p~~~~~~~ld~~LiLhADHeg~N~STftaRvvaSt~ad~ysava 261 (435)
T 1csh_A 189 RNLYRAGSSIGAIDSKLDWSHNFTNMLGY-------TDPQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFA 261 (435)
T ss_dssp HHHHSTTCCCCCCCTTSCHHHHHHHHHTC-------CCHHHHHHHHHHHHHTSCCCSCSHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHhccCCCCccCCCCCCCHHHHHHHHhcC-------CChHHHHHHHHHHHHccCCCCCchHHHHHHHHHhcCCCHHHHHH
Confidence 999876 688999999999999999974 7999999999999999999 699999999999999999999999
Q ss_pred HHhhcccCCcccChHHHHHHHHH----HhC---CCCCHHHHHHHHhhcCCcccccCCCCCCCCCchHHHHHHHHHHHHHh
Q 014050 316 GAVGALYGPLHGGANEAVLKMLN----EIG---TVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIRKLAEEVFSI 388 (431)
Q Consensus 316 Agi~AL~GPlHGGAneavl~mL~----eI~---~~~~v~~~i~~~k~~~~rL~GFGHrVYk~~DPRA~iL~~~a~el~~~ 388 (431)
|||++||||+||||||+|++||+ +|+ +++++++||++++++|++||||||||||++|||+++|+++|+++
T Consensus 262 agi~aL~GplHGGAne~v~~ml~~i~~~ig~~~~~~~~~~~v~~~l~~g~~i~GfGHrVyk~~DPRa~~L~~~a~~l--- 338 (435)
T 1csh_A 262 AAMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKH--- 338 (435)
T ss_dssp HHHHHHTSTTTTTHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHTTCCCTTBCCSSCCSCCHHHHHHHHHHHHH---
T ss_pred HHHHhccCCcccChHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCceecCCccccCCCCCcHHHHHHHHHHh---
Confidence 99999999999999999999996 456 35789999999999999999999999999999999999999998
Q ss_pred hCCCcHHHHHHHHHHHHhc--CcccccCCCcccccchHhhhccc
Q 014050 389 VGRDPLIEVAVALEKAALS--DEYFVKRKLYPNVDFYSGLIYRY 430 (431)
Q Consensus 389 ~g~~~l~~iA~~Le~~a~~--d~yf~~r~LyPNVDfysg~i~~~ 430 (431)
.+.+|++++|.+||+++.+ +++|+.|+||||||||||+||+.
T Consensus 339 ~~~~~~~~~a~~le~~a~~~l~~~~~~k~l~pNVDf~sg~i~~~ 382 (435)
T 1csh_A 339 LPSDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQY 382 (435)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTCCSCCSBCTHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Confidence 5678999999999999854 45799999999999999999974
No 18
>3u5c_P 40S ribosomal protein S15; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_R 3o30_I 3o2z_I 3u5g_P 1s1h_S 3jyv_S*
Probab=52.26 E-value=5.6 Score=34.85 Aligned_cols=24 Identities=33% Similarity=0.390 Sum_probs=21.1
Q ss_pred eeEEccCCHHHHhhcCCHHHHHHHH
Q 014050 120 ILRYRGYPIEELAESSSFLEVAYLL 144 (431)
Q Consensus 120 ~L~YRGy~I~eLa~~~sFeEva~LL 144 (431)
...|||++++||-+ .+++|.+-|+
T Consensus 14 kFtyrG~~ld~Ll~-ms~e~l~~L~ 37 (142)
T 3u5c_P 14 THSYRGVDLEKLLE-MSTEDFVKLA 37 (142)
T ss_dssp CCBSSSCBHHHHHT-TCHHHHHHHS
T ss_pred eEEEccccHHHHHc-CCHHHHHHHh
Confidence 35899999999997 7999988887
No 19
>2xzm_S RPS15E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_S 3j0o_S 3j0l_S 3j0p_S 3j0q_S
Probab=50.30 E-value=4.9 Score=35.32 Aligned_cols=25 Identities=32% Similarity=0.375 Sum_probs=20.1
Q ss_pred eeEEccCCHHHHhh--------cCCHHHHHHHH
Q 014050 120 ILRYRGYPIEELAE--------SSSFLEVAYLL 144 (431)
Q Consensus 120 ~L~YRGy~I~eLa~--------~~sFeEva~LL 144 (431)
.-.|||++++||.+ +.+++|.+-|+
T Consensus 10 kftyrG~~l~~L~~~~~~~~~~~m~~~~~~~l~ 42 (144)
T 2xzm_S 10 KFTFRGKGLEELTALASGSNSEKLISDELAALF 42 (144)
T ss_dssp -CCCCTTCHHHHHHHHSSTTCCSSSCHHHHHHS
T ss_pred eeeecCCcHHHHHhhhcccccccCCHHHHHHHh
Confidence 36799999999987 35788888776
No 20
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=46.56 E-value=1.8e+02 Score=29.02 Aligned_cols=63 Identities=17% Similarity=0.237 Sum_probs=43.9
Q ss_pred hcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCC--CCHH--HHHHHHhCCCCCChhHHHHHHHHhhh
Q 014050 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (431)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~--lpe~--v~~~~~~~p~~ahPM~~L~a~vsaLs 197 (431)
.+.+|-|..+++|.|+.|++.+.+.|..-|--|.. .... ..+++.+ ..++|-+.+.+++++|.
T Consensus 145 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~ST~aaRv~aS--t~ad~~savaagi~aL~ 211 (373)
T 1vgp_A 145 PKLSHSENFLYMLYGDRPNEIKSKAMDVTLILHIDHEMNASTFASLVVAS--TFSDLYSSIVAGISALK 211 (373)
T ss_dssp TTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHh--cCccHHHHHHHHHHhcC
Confidence 34589999999999999999998888877744432 2221 2233333 34778888888888774
No 21
>3j20_T 30S ribosomal protein S19P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=44.56 E-value=5.3 Score=34.60 Aligned_cols=24 Identities=46% Similarity=0.768 Sum_probs=20.3
Q ss_pred eeEEccCCHHHHhhcCCHHHHHHHH
Q 014050 120 ILRYRGYPIEELAESSSFLEVAYLL 144 (431)
Q Consensus 120 ~L~YRGy~I~eLa~~~sFeEva~LL 144 (431)
...|||++++||-+ .+++|.+-|+
T Consensus 5 kftyrG~~ld~L~~-ms~~~l~~L~ 28 (132)
T 3j20_T 5 EFRYRGYTLEQLMN-MSLEELARLF 28 (132)
T ss_dssp -CCSSSSCHHHHHH-HHHHHHHHHS
T ss_pred EEEEcCCcHHHHHc-CCHHHHHHHh
Confidence 46799999999987 6889988886
No 22
>3iz6_R 40S ribosomal protein S15 (S19P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 2zkq_s
Probab=37.88 E-value=6.8 Score=34.74 Aligned_cols=24 Identities=25% Similarity=0.411 Sum_probs=0.0
Q ss_pred eeEEccCCHHHHhhcCCHHHHHHHH
Q 014050 120 ILRYRGYPIEELAESSSFLEVAYLL 144 (431)
Q Consensus 120 ~L~YRGy~I~eLa~~~sFeEva~LL 144 (431)
...|||++++||-+ .+++|.+-|+
T Consensus 23 kFtYrG~~ld~Ll~-ms~eel~~L~ 46 (154)
T 3iz6_R 23 KYSYRGVDLDALLD-MSTDDLVQLF 46 (154)
T ss_dssp -------------------------
T ss_pred eEEEecCcHHHHHh-CCHHHHHHHc
Confidence 46899999999987 6889988877
No 23
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=36.98 E-value=2.6e+02 Score=27.75 Aligned_cols=62 Identities=15% Similarity=0.265 Sum_probs=43.2
Q ss_pred cCCHHHHHHHHHhCCCCCHHHHHHHHHHH---hhcCCCCHH--HHHHHHhCCCCCChhHHHHHHHHhhhh
Q 014050 134 SSSFLEVAYLLMYGNLPSESQLTDWEFAV---SQHSAVPQG--ILDIIQAMPHDAHPMGVLVSAMSALSI 198 (431)
Q Consensus 134 ~~sFeEva~LL~~G~LPt~~ql~~f~~~l---~~~~~lpe~--v~~~~~~~p~~ahPM~~L~a~vsaLs~ 198 (431)
+.+|-|..+++|.|+.|++.+.+.|..-| ..|.. ... ..+++.+ ..++|-..+.+++++|..
T Consensus 143 ~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg~-n~St~aarv~aS--t~~d~~savaagi~aL~G 209 (363)
T 2c6x_A 143 QYGHVENYYYMLTGEQPSEAKKKALETYMILATEHGM-NASTFSARVTLS--TESDLVSAVTAALGTMKG 209 (363)
T ss_dssp TSCSHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCCSS-CHHHHHHHHHHT--TTCCHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccCCC-cHHHHHHHHHHh--cCccHHHHHHHHHHHccc
Confidence 45899999999999999999888887766 34432 322 2233333 346788888888888753
No 24
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=32.34 E-value=1.3e+02 Score=29.86 Aligned_cols=98 Identities=17% Similarity=0.279 Sum_probs=60.9
Q ss_pred ceeecCCCccccee--eeeeeeEeCCCCeeEE-----ccCCHHHHhhcCCHHHHHHHHH-hCCCCCHHHHHHHHHHHhhc
Q 014050 94 LKLYDPGYLNTAPV--RSSICYIDGDEGILRY-----RGYPIEELAESSSFLEVAYLLM-YGNLPSESQLTDWEFAVSQH 165 (431)
Q Consensus 94 ~~~~dpG~~~t~~~--~S~IT~Idg~~G~L~Y-----RGy~I~eLa~~~sFeEva~LL~-~G~LPt~~ql~~f~~~l~~~ 165 (431)
-+.+|-|+.+.-.- +=.-||-. +|-|=- +|.++.|+..+.+.+|.+..|+ |||.+.....+...-+-.+.
T Consensus 131 gILfDLGVSS~QlD~~eRGFSf~~--dgPLDMRMd~~~~~tAadvvn~~~e~eLa~Il~~YGEEr~a~rIA~aIv~~R~~ 208 (347)
T 3tka_A 131 GILLDLGVSSPQLDDAERGFSFMR--DGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNRE 208 (347)
T ss_dssp EEEEECSCCHHHHHCGGGCCCSSS--CCBSCCCSCTTSSCCHHHHHHHCCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHH
T ss_pred EEEECCccCHHHhcCCCCCCCCCC--CCCcCCCCCCCCCCCHHHHHhhCCHHHHHHHHHHhcCcchHHHHHHHHHHHHhc
Confidence 34577777654322 22234432 233332 4899999999999999999998 79998887777655444444
Q ss_pred CCCC--HHHHHHHHh-CCC---CCChhHHHHHHH
Q 014050 166 SAVP--QGILDIIQA-MPH---DAHPMGVLVSAM 193 (431)
Q Consensus 166 ~~lp--e~v~~~~~~-~p~---~ahPM~~L~a~v 193 (431)
..+. .++.+++.. +|. ..||.....-++
T Consensus 209 ~pi~tT~~La~ii~~a~p~~~~~~hpAtrtFQAL 242 (347)
T 3tka_A 209 QPMTRTKELAEVVAAATPVKDKFKHPATRTFQAV 242 (347)
T ss_dssp SCCCBHHHHHHHHHHHSCCC----CTTHHHHHHH
T ss_pred CCCCcHHHHHHHHHHhCCccccCCCchHHHHHHH
Confidence 4554 356676644 563 358887755443
No 25
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=31.27 E-value=72 Score=32.09 Aligned_cols=63 Identities=16% Similarity=0.165 Sum_probs=43.4
Q ss_pred hcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCC--CCHH--HHHHHHhCCCCCChhHHHHHHHHhhh
Q 014050 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (431)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~--lpe~--v~~~~~~~p~~ahPM~~L~a~vsaLs 197 (431)
.+.+|-|..+++|.|+.|++.+.+.|..-|--|.. .... ..+++.+ ..++|-+.+.+++++|.
T Consensus 153 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aS--t~~d~~savaagi~aL~ 219 (385)
T 2ifc_A 153 PSDSYAESFLNAAFGRKATKEEIDAMNTALILYTDHEVPASTTAGLVAVS--TLSDMYSGITAALAALK 219 (385)
T ss_dssp CCSCHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhCCCCCHHHHHHHHHHHhHhcCCCccHHHHHHHHHHh--cCCcHHHHHHHHHHHcc
Confidence 34589999999999999999988888877644432 2222 2233333 34578888888888774
No 26
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=28.02 E-value=89 Score=31.31 Aligned_cols=63 Identities=17% Similarity=0.281 Sum_probs=43.6
Q ss_pred hcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCC--CCHH--HHHHHHhCCCCCChhHHHHHHHHhhh
Q 014050 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (431)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~--lpe~--v~~~~~~~p~~ahPM~~L~a~vsaLs 197 (431)
.+.+|-|..+++|.|+.|++.+.+.|..-|--|.. .... ..+++.+ ..++|-+.+.+++++|.
T Consensus 149 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aS--t~~d~~savaagi~aL~ 215 (378)
T 1vgm_A 149 PSESYAESFLAATFGKKPTQEEIKAMDASLILYTDHEVPASTTAALVASS--TLSDMYSCIVAALAALK 215 (378)
T ss_dssp CCSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHh--cCCcHHHHHHHHHHhcc
Confidence 34589999999999999999998888877644432 2322 2233333 34678888888888774
No 27
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=27.77 E-value=90 Score=31.21 Aligned_cols=63 Identities=11% Similarity=0.166 Sum_probs=44.2
Q ss_pred hcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCC--CCHH--HHHHHHhCCCCCChhHHHHHHHHhhh
Q 014050 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (431)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~--lpe~--v~~~~~~~p~~ahPM~~L~a~vsaLs 197 (431)
.+.+|-|..+++|.|+.|++.+.+.|..-|--|.. .... ..+++.+ ..++|-..+.+++++|.
T Consensus 151 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aS--t~~d~~savaagi~aL~ 217 (378)
T 1a59_A 151 EDLDYSANFLWMTFGEEAAPEVVEAFNVSMILYAEHSFNASTFTARVITS--TLADLHSAVTGAIGALK 217 (378)
T ss_dssp TTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcCCCCCchHHHHHHHhh--cCCcHHHHHHHHHHHcc
Confidence 34589999999999999999998888877644432 2221 2233333 34778888888888874
No 28
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=26.03 E-value=1.8e+02 Score=28.02 Aligned_cols=99 Identities=19% Similarity=0.249 Sum_probs=60.2
Q ss_pred cceeecCCCcccceee--eeeeeEeCCCCeeEE----ccCCHHHHhhcCCHHHHHHHHH-hCCCCCHHHHHHHHHHHhhc
Q 014050 93 GLKLYDPGYLNTAPVR--SSICYIDGDEGILRY----RGYPIEELAESSSFLEVAYLLM-YGNLPSESQLTDWEFAVSQH 165 (431)
Q Consensus 93 g~~~~dpG~~~t~~~~--S~IT~Idg~~G~L~Y----RGy~I~eLa~~~sFeEva~LL~-~G~LPt~~ql~~f~~~l~~~ 165 (431)
..+.+|.|+...-..+ =.-||-. +|-|=- .|.++.|+..+.+.+|.+..|+ |||.+...+.+...-+-.+.
T Consensus 91 DgIL~DLGvSS~Qld~~~RGFSf~~--d~pLDMRMd~~~~tA~~~vn~~~~~~L~~i~~~yGee~~a~~iA~~Iv~~R~~ 168 (285)
T 1wg8_A 91 DGILADLGVSSFHLDDPSRGFSYQK--EGPLDMRMGLEGPTAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVAAREK 168 (285)
T ss_dssp EEEEEECSCCHHHHHCGGGCCCSSS--CCBSCCCSSSCSCCHHHHHHHSCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHH
T ss_pred CEEEeCCccccccccccccCccccC--CCcchhhcCCCCCcHHHHHhhCCHHHHHHHHHHhcCHhHHHHHHHHHHHHhcc
Confidence 3456888887644211 1223321 122222 2899999999999999999887 79988877766654333333
Q ss_pred CCCC--HHHHHHHHh-CC--CCCChhHHHHHHH
Q 014050 166 SAVP--QGILDIIQA-MP--HDAHPMGVLVSAM 193 (431)
Q Consensus 166 ~~lp--e~v~~~~~~-~p--~~ahPM~~L~a~v 193 (431)
..+. .++.+++.. +| ...||.....-++
T Consensus 169 ~pi~tt~~L~~ii~~~~p~~~~~hpatr~FQAl 201 (285)
T 1wg8_A 169 APIETTTQLAEIVRKAVGFRRAGHPARKTFQAL 201 (285)
T ss_dssp SCCCBHHHHHHHHHHHHCCCSSSCTTHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHcCCCCCCCchHHHHHHH
Confidence 3444 456666644 56 3469966654443
No 29
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=23.46 E-value=1.9e+02 Score=28.88 Aligned_cols=61 Identities=8% Similarity=0.044 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCC--CCH--HHHHHHHhCCCCCChhHHHHHHHHhhh
Q 014050 135 SSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQ--GILDIIQAMPHDAHPMGVLVSAMSALS 197 (431)
Q Consensus 135 ~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~--lpe--~v~~~~~~~p~~ahPM~~L~a~vsaLs 197 (431)
.+|-|..+++|.|+.|++.+.+.|..-|.-|.. ... ...++..+ ..++|-..+.+++++|.
T Consensus 153 ls~a~nfl~ml~g~~p~~~~~~~ld~~Lil~ADHe~n~St~tarvvaS--t~ad~ysavaagi~aL~ 217 (375)
T 3tqg_A 153 LTLAGYFLHLLLGKKAAQMAIDCMNASLILYAEHEFNASTFAARVCSA--TLSDIYSAVTAAIATLR 217 (375)
T ss_dssp SSHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCHHHHHHHHHHc--cCCCHHHHHHHHHHhcc
Confidence 589999999999999999998888876644432 222 22334443 34678888888888774
No 30
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=22.70 E-value=1.3e+02 Score=30.45 Aligned_cols=62 Identities=15% Similarity=0.241 Sum_probs=43.0
Q ss_pred cCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCC--CCHH--HHHHHHhCCCCCChhHHHHHHHHhhh
Q 014050 134 SSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (431)
Q Consensus 134 ~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~--lpe~--v~~~~~~~p~~ahPM~~L~a~vsaLs 197 (431)
+.+|-|..+++|.|+.|++.+.+.|..-|--|.. .... ..+++.+ ..++|-+.+.+++++|.
T Consensus 180 ~ls~a~nfl~ml~g~~p~~~~~~~ld~~LvL~ADHg~naST~aaRv~aS--t~ad~~savaagi~aL~ 245 (409)
T 2ibp_A 180 DLGHAANFLYMMFGREPDPLASRGIDLYLILHADHEVPASTFAAHVVAS--TLSDLYSSVAAAIAALK 245 (409)
T ss_dssp TSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCCCChhHHHHHHHhh--cCCcHHHHHHHHHHHcc
Confidence 4589999999999999999998888887644432 2221 2233333 34678888888887774
No 31
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=22.63 E-value=1.3e+02 Score=30.56 Aligned_cols=72 Identities=11% Similarity=0.194 Sum_probs=47.0
Q ss_pred cCCHHHHhhcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCC--CCH--HHHHHHHhCCCCCChhHHHHHHHHhhhh
Q 014050 125 GYPIEELAESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQ--GILDIIQAMPHDAHPMGVLVSAMSALSI 198 (431)
Q Consensus 125 Gy~I~eLa~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~--lpe--~v~~~~~~~p~~ahPM~~L~a~vsaLs~ 198 (431)
|.++.+--.+-+|-|..+.+|.|+.|++.+.+.|..-|.-|.. ..- ...++..+ ..++|-..+.+++++|..
T Consensus 185 g~~~~~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe~NaST~taRvvaS--t~ad~ysavaagi~aL~G 260 (414)
T 3hwk_A 185 GLPPIAPHSGLGYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHGFNASTFAARVVTS--TQSDIYSAVTGAIGALKG 260 (414)
T ss_dssp TCCCCCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHTS
T ss_pred CCCCCCCCccccHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCCCChHHHHHHHHHh--cCCCHHHHHHHHHHHhcC
Confidence 4443333334689999999999999999988888877644432 222 22234433 346688888888887743
No 32
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=21.57 E-value=2.4e+02 Score=28.14 Aligned_cols=64 Identities=16% Similarity=0.089 Sum_probs=44.3
Q ss_pred hcCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCC--CCHH--HHHHHHhCCCCCChhHHHHHHHHhhhh
Q 014050 133 ESSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALSI 198 (431)
Q Consensus 133 ~~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~--lpe~--v~~~~~~~p~~ahPM~~L~a~vsaLs~ 198 (431)
.+.+|-|..+++|.|+.|++.+.+.|..-|--|.. .... ..+++.+ ..++|-+.+.+++++|..
T Consensus 149 ~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aS--t~~d~~savaagi~aL~G 216 (377)
T 1iom_A 149 EDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFS--TETDLYSAITAAVASLKG 216 (377)
T ss_dssp TTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCchHHHHHHHhh--cCCcHHHHHHHHHHHccc
Confidence 34589999999999999999998888777644432 2221 2233333 347788888888888743
No 33
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=21.18 E-value=2.5e+02 Score=27.96 Aligned_cols=62 Identities=10% Similarity=0.113 Sum_probs=43.3
Q ss_pred cCCHHHHHHHHHhCCCCCHHHHHHHHHHHhhcCC--CCHH--HHHHHHhCCCCCChhHHHHHHHHhhh
Q 014050 134 SSSFLEVAYLLMYGNLPSESQLTDWEFAVSQHSA--VPQG--ILDIIQAMPHDAHPMGVLVSAMSALS 197 (431)
Q Consensus 134 ~~sFeEva~LL~~G~LPt~~ql~~f~~~l~~~~~--lpe~--v~~~~~~~p~~ahPM~~L~a~vsaLs 197 (431)
+.+|-|..+++|.|+.|++.+.+.|..-|--|.. .... ..+++.+ ..++|-+.+.+++++|.
T Consensus 149 ~ls~~~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aS--t~~d~~savaagi~aL~ 214 (371)
T 1aj8_A 149 KLSHAANFLYMLHGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGS--TLSDYYSAILAGIGALK 214 (371)
T ss_dssp TSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCCCCHHHHHHHHHHHhHhcCCCCChhHHHHHHHhh--cCCcHHHHHHHHHHHcC
Confidence 4589999999999999999998888776644432 2222 2233333 34778888888888874
Done!