Query 014057
Match_columns 431
No_of_seqs 238 out of 796
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 04:43:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014057.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014057hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyx_A ORF K3, K3RING; zinc-bi 99.7 1.5E-17 5.2E-22 128.0 4.0 56 264-322 4-59 (60)
2 2d8s_A Cellular modulator of i 99.6 8.5E-16 2.9E-20 124.2 5.2 59 264-323 13-71 (80)
3 2kiz_A E3 ubiquitin-protein li 98.4 2.7E-07 9.4E-12 69.9 5.2 52 264-322 12-63 (69)
4 2ep4_A Ring finger protein 24; 98.3 7.4E-07 2.5E-11 68.4 5.5 52 265-323 14-65 (74)
5 2ect_A Ring finger protein 126 98.2 5.6E-07 1.9E-11 69.8 3.1 53 264-323 13-65 (78)
6 1x4j_A Ring finger protein 38; 98.2 5.9E-07 2E-11 69.4 2.8 51 264-321 21-71 (75)
7 2l0b_A E3 ubiquitin-protein li 98.1 1E-06 3.4E-11 71.2 3.3 51 264-321 38-88 (91)
8 1iym_A EL5; ring-H2 finger, ub 98.1 7.8E-07 2.7E-11 64.4 2.1 50 265-321 4-54 (55)
9 1v87_A Deltex protein 2; ring- 98.0 3.9E-06 1.3E-10 69.3 4.0 53 266-323 25-95 (114)
10 2ecm_A Ring finger and CHY zin 98.0 4E-06 1.4E-10 60.5 3.0 50 265-321 4-54 (55)
11 2ct2_A Tripartite motif protei 97.9 1.1E-05 3.9E-10 63.1 5.6 55 264-323 13-69 (88)
12 2yur_A Retinoblastoma-binding 97.9 1E-05 3.4E-10 62.7 4.3 50 264-321 13-63 (74)
13 2ea6_A Ring finger protein 4; 97.9 8.6E-06 2.9E-10 60.9 3.6 51 264-321 13-67 (69)
14 2csy_A Zinc finger protein 183 97.9 2E-05 6.9E-10 61.6 5.7 48 264-321 13-60 (81)
15 2ecl_A Ring-box protein 2; RNF 97.8 7.9E-06 2.7E-10 64.8 3.1 51 266-323 15-77 (81)
16 2d8t_A Dactylidin, ring finger 97.8 1.5E-05 5.2E-10 61.0 3.4 49 265-323 14-62 (71)
17 2ysl_A Tripartite motif-contai 97.7 2.5E-05 8.4E-10 59.4 4.3 51 264-322 18-69 (73)
18 3ng2_A RNF4, snurf, ring finge 97.7 1.6E-05 5.6E-10 60.0 2.2 52 264-322 8-63 (71)
19 1chc_A Equine herpes virus-1 r 97.6 3E-05 1E-09 58.3 3.5 51 264-323 3-53 (68)
20 3dpl_R Ring-box protein 1; ubi 97.6 3.4E-05 1.2E-09 65.1 4.1 51 266-323 37-102 (106)
21 2ecw_A Tripartite motif-contai 97.6 8.8E-05 3E-09 57.2 6.1 50 265-322 18-71 (85)
22 3ztg_A E3 ubiquitin-protein li 97.6 5.1E-05 1.7E-09 60.3 4.6 50 264-321 11-61 (92)
23 2ecn_A Ring finger protein 141 97.6 1.8E-05 6.3E-10 59.9 1.9 47 265-322 14-60 (70)
24 2ecy_A TNF receptor-associated 97.6 4.5E-05 1.5E-09 57.4 4.0 50 264-322 13-62 (66)
25 2ysj_A Tripartite motif-contai 97.6 0.00011 3.7E-09 54.6 5.7 45 264-316 18-63 (63)
26 2ecv_A Tripartite motif-contai 97.6 9.5E-05 3.3E-09 57.0 5.4 51 264-322 17-71 (85)
27 2ecj_A Tripartite motif-contai 97.5 8.5E-05 2.9E-09 53.8 4.7 45 264-316 13-58 (58)
28 2djb_A Polycomb group ring fin 97.5 8.1E-05 2.8E-09 57.0 4.7 49 265-323 14-63 (72)
29 2xeu_A Ring finger protein 4; 97.5 3.6E-05 1.2E-09 56.6 1.9 51 265-322 2-56 (64)
30 2ct0_A Non-SMC element 1 homol 97.5 6.7E-05 2.3E-09 60.1 3.6 53 264-323 13-65 (74)
31 1t1h_A Gspef-atpub14, armadill 97.5 7.7E-05 2.6E-09 57.6 3.6 51 263-322 5-55 (78)
32 4a0k_B E3 ubiquitin-protein li 97.3 4.1E-05 1.4E-09 66.0 0.5 51 266-323 48-113 (117)
33 2egp_A Tripartite motif-contai 97.2 7.2E-05 2.5E-09 57.5 0.8 51 264-322 10-65 (79)
34 3k1l_B Fancl; UBC, ring, RWD, 97.0 0.00031 1.1E-08 71.2 3.8 55 264-321 306-372 (381)
35 4ayc_A E3 ubiquitin-protein li 97.0 0.00013 4.3E-09 62.9 0.7 48 266-323 53-100 (138)
36 3lrq_A E3 ubiquitin-protein li 97.0 0.00019 6.7E-09 58.6 1.6 49 265-322 21-70 (100)
37 3fl2_A E3 ubiquitin-protein li 96.9 0.00026 9E-09 59.5 1.7 49 265-322 51-99 (124)
38 2ckl_B Ubiquitin ligase protei 96.9 0.00035 1.2E-08 61.5 2.1 49 265-322 53-102 (165)
39 1g25_A CDK-activating kinase a 96.9 0.00048 1.7E-08 51.5 2.6 52 265-322 2-55 (65)
40 1e4u_A Transcriptional repress 96.8 0.00072 2.4E-08 53.9 3.5 57 264-325 9-65 (78)
41 2y43_A E3 ubiquitin-protein li 96.8 0.00031 1.1E-08 56.7 1.3 48 265-322 21-69 (99)
42 4ap4_A E3 ubiquitin ligase RNF 96.8 0.00038 1.3E-08 57.6 1.5 54 265-325 6-63 (133)
43 1jm7_A BRCA1, breast cancer ty 96.7 0.00078 2.7E-08 54.9 3.0 49 266-322 21-70 (112)
44 2ckl_A Polycomb group ring fin 96.7 0.00062 2.1E-08 55.9 2.1 48 265-322 14-62 (108)
45 1z6u_A NP95-like ring finger p 96.5 0.00076 2.6E-08 59.5 1.6 50 265-323 77-126 (150)
46 3hct_A TNF receptor-associated 96.5 0.0016 5.6E-08 54.4 3.6 51 264-323 16-66 (118)
47 4ap4_A E3 ubiquitin ligase RNF 96.3 0.0018 6.3E-08 53.4 2.8 52 264-322 70-125 (133)
48 3l11_A E3 ubiquitin-protein li 96.2 0.00062 2.1E-08 56.4 -0.8 49 265-322 14-62 (115)
49 1wgm_A Ubiquitin conjugation f 96.2 0.0054 1.9E-07 50.6 4.9 50 264-322 20-69 (98)
50 1rmd_A RAG1; V(D)J recombinati 96.1 0.0018 6.1E-08 53.7 1.6 49 265-322 22-70 (116)
51 2kr4_A Ubiquitin conjugation f 96.1 0.0068 2.3E-07 48.5 5.0 49 264-322 12-60 (85)
52 2y1n_A E3 ubiquitin-protein li 96.1 0.0034 1.2E-07 64.1 3.9 49 266-323 332-380 (389)
53 2vje_B MDM4 protein; proto-onc 95.9 0.0035 1.2E-07 47.5 2.4 54 261-323 2-57 (63)
54 2kre_A Ubiquitin conjugation f 95.8 0.01 3.5E-07 49.1 5.1 49 264-322 27-75 (100)
55 2ea5_A Cell growth regulator w 95.5 0.015 5.2E-07 44.8 4.7 50 261-323 10-59 (68)
56 4ic3_A E3 ubiquitin-protein li 95.5 0.0022 7.5E-08 49.8 -0.2 45 265-323 23-68 (74)
57 2c2l_A CHIP, carboxy terminus 95.3 0.011 3.9E-07 54.4 3.9 49 265-322 207-255 (281)
58 1jm7_B BARD1, BRCA1-associated 95.1 0.0027 9.1E-08 53.0 -0.8 45 265-321 21-66 (117)
59 2vje_A E3 ubiquitin-protein li 94.9 0.011 3.9E-07 44.8 2.3 49 265-323 7-58 (64)
60 3knv_A TNF receptor-associated 94.7 0.0062 2.1E-07 53.2 0.2 49 263-320 28-76 (141)
61 1bor_A Transcription factor PM 94.5 0.007 2.4E-07 44.5 0.2 46 264-322 4-49 (56)
62 3nw0_A Non-structural maintena 94.4 0.021 7E-07 54.3 3.3 50 266-323 180-230 (238)
63 2ecg_A Baculoviral IAP repeat- 94.2 0.0036 1.2E-07 48.5 -2.2 44 265-322 24-68 (75)
64 2f42_A STIP1 homology and U-bo 93.7 0.038 1.3E-06 50.8 3.3 49 265-322 105-153 (179)
65 3hcs_A TNF receptor-associated 93.6 0.035 1.2E-06 48.8 2.8 50 264-322 16-65 (170)
66 2yu4_A E3 SUMO-protein ligase 93.5 0.054 1.8E-06 43.8 3.6 48 264-319 5-59 (94)
67 3t6p_A Baculoviral IAP repeat- 90.6 0.044 1.5E-06 54.8 -0.3 45 265-323 294-339 (345)
68 3htk_C E3 SUMO-protein ligase 90.5 0.2 6.7E-06 49.0 4.2 51 264-322 179-232 (267)
69 1wim_A KIAA0161 protein; ring 89.8 0.19 6.3E-06 40.2 2.8 50 265-320 4-62 (94)
70 2lri_C Autoimmune regulator; Z 88.1 0.16 5.6E-06 39.5 1.4 57 259-324 5-64 (66)
71 2yho_A E3 ubiquitin-protein li 87.7 0.1 3.4E-06 41.2 -0.1 46 265-323 17-62 (79)
72 2bay_A PRE-mRNA splicing facto 85.2 0.44 1.5E-05 36.0 2.4 46 267-322 4-50 (61)
73 2l43_A N-teminal domain from h 82.1 0.54 1.8E-05 38.3 1.8 53 263-319 22-75 (88)
74 1wev_A Riken cDNA 1110020M19; 75.1 0.19 6.6E-06 40.8 -2.9 56 263-321 13-74 (88)
75 2ku3_A Bromodomain-containing 71.2 1 3.4E-05 35.4 0.5 52 264-319 14-66 (71)
76 1weu_A Inhibitor of growth fam 68.1 2.9 9.9E-05 34.6 2.6 50 263-319 33-85 (91)
77 1weo_A Cellulose synthase, cat 65.6 7.3 0.00025 32.6 4.5 54 265-323 15-71 (93)
78 1wen_A Inhibitor of growth fam 57.7 2.2 7.5E-05 33.4 0.0 49 263-319 13-65 (71)
79 2l5u_A Chromodomain-helicase-D 56.3 3.1 0.00011 31.4 0.7 47 265-319 10-58 (61)
80 3ql9_A Transcriptional regulat 53.0 8.1 0.00028 33.8 2.9 48 263-318 54-110 (129)
81 3u5n_A E3 ubiquitin-protein li 51.3 1.5 5.1E-05 40.2 -2.2 48 265-320 6-55 (207)
82 3o36_A Transcription intermedi 50.4 1.8 6.2E-05 38.7 -1.7 47 265-319 3-51 (184)
83 1mm2_A MI2-beta; PHD, zinc fin 49.2 2 6.7E-05 32.5 -1.5 47 265-319 8-56 (61)
84 1xwh_A Autoimmune regulator; P 48.6 1.8 6.3E-05 33.0 -1.7 50 262-319 4-55 (66)
85 2ri7_A Nucleosome-remodeling f 47.7 3.7 0.00013 36.2 -0.2 51 264-319 6-59 (174)
86 2lbm_A Transcriptional regulat 47.5 9 0.00031 34.0 2.3 46 265-318 62-116 (142)
87 2e6r_A Jumonji/ARID domain-con 46.0 2.1 7.2E-05 35.0 -1.8 49 265-319 15-66 (92)
88 1f62_A Transcription factor WS 44.4 4.9 0.00017 28.8 0.1 47 267-318 1-49 (51)
89 2kdr_X NS4B, P27, non-structur 44.3 16 0.00056 24.5 2.6 23 390-412 6-28 (28)
90 1wem_A Death associated transc 43.8 24 0.00083 27.2 4.0 55 260-320 10-71 (76)
91 4gne_A Histone-lysine N-methyl 43.2 5.5 0.00019 33.7 0.2 44 263-314 12-57 (107)
92 2k16_A Transcription initiatio 41.3 4.7 0.00016 31.1 -0.4 50 265-320 17-69 (75)
93 1wep_A PHF8; structural genomi 39.4 19 0.00064 28.2 2.8 52 264-320 10-64 (79)
94 2ysm_A Myeloid/lymphoid or mix 39.0 4.8 0.00016 33.2 -0.8 51 264-319 5-63 (111)
95 1fp0_A KAP-1 corepressor; PHD 38.7 7.4 0.00025 32.0 0.3 49 263-319 22-72 (88)
96 2vnf_A ING 4, P29ING4, inhibit 35.2 3.1 0.00011 31.4 -2.3 48 263-318 7-58 (60)
97 2yt5_A Metal-response element- 34.7 12 0.00042 27.9 1.0 53 263-319 3-61 (66)
98 1wil_A KIAA1045 protein; ring 33.1 35 0.0012 28.4 3.5 34 264-304 13-47 (89)
99 3v43_A Histone acetyltransfera 32.7 20 0.00068 29.8 2.0 36 265-303 4-43 (112)
100 2kwj_A Zinc finger protein DPF 32.4 10 0.00035 31.7 0.2 50 267-319 2-67 (114)
101 2jmi_A Protein YNG1, ING1 homo 31.3 4 0.00014 33.7 -2.4 49 264-318 24-75 (90)
102 2ko5_A Ring finger protein Z; 31.2 56 0.0019 27.6 4.5 45 266-321 28-72 (99)
103 2lv9_A Histone-lysine N-methyl 28.3 12 0.00041 30.7 -0.0 48 266-319 28-76 (98)
104 2yql_A PHD finger protein 21A; 27.0 4.8 0.00016 29.7 -2.5 46 265-318 8-55 (56)
105 3kv5_D JMJC domain-containing 25.4 11 0.00037 39.4 -1.0 51 264-319 35-88 (488)
106 3vk6_A E3 ubiquitin-protein li 24.8 45 0.0015 28.3 2.8 35 284-324 17-51 (101)
107 2xb1_A Pygopus homolog 2, B-ce 22.9 21 0.00073 29.6 0.5 49 267-319 4-61 (105)
108 2k9h_A Glycoprotein; hantaviru 22.2 29 0.00099 26.7 1.0 16 308-323 1-16 (57)
109 1x4i_A Inhibitor of growth pro 21.7 15 0.00051 28.6 -0.6 52 263-320 3-56 (70)
110 2puy_A PHD finger protein 21A; 21.5 7.6 0.00026 28.9 -2.3 47 265-319 4-52 (60)
111 2vpb_A Hpygo1, pygopus homolog 20.6 38 0.0013 25.9 1.4 34 263-301 5-40 (65)
No 1
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=99.68 E-value=1.5e-17 Score=128.00 Aligned_cols=56 Identities=38% Similarity=0.805 Sum_probs=50.0
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
+++..||||+++. ++.+++||.|+|++++||+.||.+|+..+++.+||+|+++|..
T Consensus 4 ~~~~~CrIC~~~~---~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 4 EDVPVCWICNEEL---GNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp CSCCEETTTTEEC---SCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCEeEEeecCC---CCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeec
Confidence 3578999999874 3457899999999999999999999999999999999999864
No 2
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=8.5e-16 Score=124.23 Aligned_cols=59 Identities=32% Similarity=0.757 Sum_probs=52.0
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
+++..|+||+++..+ ++.+++||+|+|+++++|+.||++|+..+++..||+|++.|...
T Consensus 13 ~~~~~C~IC~~~~~~-~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~ 71 (80)
T 2d8s_A 13 SSQDICRICHCEGDD-ESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIME 71 (80)
T ss_dssp TTSCCCSSSCCCCCS-SSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCC
T ss_pred CCCCCCeEcCccccC-CCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecC
Confidence 356889999987653 56788999999999999999999999999889999999998754
No 3
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.41 E-value=2.7e-07 Score=69.94 Aligned_cols=52 Identities=31% Similarity=0.784 Sum_probs=41.5
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
+++..|.||++..........+||. +.+|..|+.+|+..+ ..|++|+..+..
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCM-----HLFHQVCVDQWLITN--KKCPICRVDIEA 63 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTS-----CEEEHHHHHHHHHHC--SBCTTTCSBSCS
T ss_pred CCCCCCeeCCccccCCCcEEEeCCC-----CHHHHHHHHHHHHcC--CCCcCcCccccC
Confidence 4568899999877554556778876 578999999999874 569999998764
No 4
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.30 E-value=7.4e-07 Score=68.42 Aligned_cols=52 Identities=25% Similarity=0.662 Sum_probs=41.0
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
++..|.||++...+......+||. +.+|..|+.+|++.+ ..|++|+..+..+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~-----H~f~~~Ci~~~~~~~--~~CP~Cr~~~~~~ 65 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCK-----HAFHRKCLIKWLEVR--KVCPLCNMPVLQL 65 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTT-----EEEEHHHHHHHHHHC--SBCTTTCCBCSSC
T ss_pred CCCCCcCCCcccCCCCcEEEcCCC-----CEecHHHHHHHHHcC--CcCCCcCcccccc
Confidence 457899999887654445566875 579999999999874 4899999987654
No 5
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.22 E-value=5.6e-07 Score=69.76 Aligned_cols=53 Identities=21% Similarity=0.621 Sum_probs=41.7
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
+++..|.||++...+......+||. +.+|..|+.+|+.. +..|++|+..+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~~ 65 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCN-----HLFHDSCIVPWLEQ--HDSCPVCRKSLTGQ 65 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTS-----CEEETTTTHHHHTT--TCSCTTTCCCCCCS
T ss_pred CCCCCCeeCCccccCCCCEEEeCCC-----CeecHHHHHHHHHc--CCcCcCcCCccCCc
Confidence 4568999999887654445567876 57999999999975 47899999997654
No 6
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.19 E-value=5.9e-07 Score=69.42 Aligned_cols=51 Identities=24% Similarity=0.674 Sum_probs=40.6
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 321 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~ 321 (431)
+++..|.||++...+......+||. +.+|..|+.+|++. +..|++|++.+.
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~-----H~fh~~Ci~~w~~~--~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCN-----HEFHAKCVDKWLKA--NRTCPICRADSG 71 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTT-----EEEETTHHHHHHHH--CSSCTTTCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCC-----CHhHHHHHHHHHHc--CCcCcCcCCcCC
Confidence 3568899999887654445678876 57999999999987 468999998864
No 7
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.15 E-value=1e-06 Score=71.18 Aligned_cols=51 Identities=29% Similarity=0.666 Sum_probs=40.8
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 321 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~ 321 (431)
+++..|.||++...+++....+||. +.+|..|+.+|+.. +..|++|+..+.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~-----H~Fh~~Ci~~wl~~--~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCH-----HYFHKPCVSIWLQK--SGTCPVCRCMFP 88 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTT-----EEEEHHHHHHHHTT--TCBCTTTCCBSS
T ss_pred CCCCCCcccChhhcCCCcEEecCCC-----ChHHHHHHHHHHHc--CCcCcCcCccCC
Confidence 3568999999887654556678876 58999999999975 568999998864
No 8
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.12 E-value=7.8e-07 Score=64.43 Aligned_cols=50 Identities=32% Similarity=0.749 Sum_probs=39.8
Q ss_pred CCCcceeeccccCCCCCceecc-cCCCCcccccCHHHHHHHHHhcCCcccccccceee
Q 014057 265 EEAVCRICFIELGEGFDALKME-CGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 321 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~P-C~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~ 321 (431)
++..|.||++...+++.....| |. +.+|..|+.+|++. +..|++|+..+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~-----H~f~~~Ci~~w~~~--~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCG-----HGFHAECVDMWLGS--HSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSC-----CEECTTHHHHTTTT--CCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCC-----CcccHHHHHHHHHc--CCcCcCCCCEeE
Confidence 5678999998876555566777 65 57999999999976 578999998753
No 9
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=97.99 E-value=3.9e-06 Score=69.34 Aligned_cols=53 Identities=23% Similarity=0.410 Sum_probs=39.6
Q ss_pred CCcceeeccccCCCC---------------CceecccCCCCcccccCHHHHHHHHHh---cCCcccccccceeeec
Q 014057 266 EAVCRICFIELGEGF---------------DALKMECGCKGELAFAHRECAVKWFSI---KGNKTCEVCKQEVENL 323 (431)
Q Consensus 266 e~vCRICl~e~~e~~---------------~~Li~PC~CkGsLk~VH~~CL~kW~~~---sgs~~CEICk~~y~n~ 323 (431)
+..|-||++...+.. ....++|. +.+|..||.+|+.. +....|++|+..|...
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~-----H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCS-----HAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSC-----CEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCC-----CcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 358999998764321 11156776 58999999999975 4568999999998754
No 10
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=97.95 E-value=4e-06 Score=60.51 Aligned_cols=50 Identities=22% Similarity=0.510 Sum_probs=39.5
Q ss_pred CCCcceeeccccCCCC-CceecccCCCCcccccCHHHHHHHHHhcCCcccccccceee
Q 014057 265 EEAVCRICFIELGEGF-DALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 321 (431)
Q Consensus 265 ee~vCRICl~e~~e~~-~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~ 321 (431)
++..|.||++...+.+ .....||. +.+|..|+.+|+..+ ..|++|+..+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCG-----HLLHRTCYEEMLKEG--YRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTS-----CEEETTHHHHHHHHT--CCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCC-----CcccHHHHHHHHHcC--CcCCCCCCcCC
Confidence 4678999998764332 35678886 589999999999885 88999998764
No 11
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.94 E-value=1.1e-05 Score=63.09 Aligned_cols=55 Identities=22% Similarity=0.419 Sum_probs=42.8
Q ss_pred CCCCcceeeccccCCCCC-ceecccCCCCcccccCHHHHHHHHHhc-CCcccccccceeeec
Q 014057 264 EEEAVCRICFIELGEGFD-ALKMECGCKGELAFAHRECAVKWFSIK-GNKTCEVCKQEVENL 323 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~-~Li~PC~CkGsLk~VH~~CL~kW~~~s-gs~~CEICk~~y~n~ 323 (431)
+++..|.||++...+.+. +..+||. +.+|..|+.+|+..+ +...|++|+..+..-
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCG-----HTICRQCLEKLLASSINGVRCPFCSKITRIT 69 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSS-----CEEEHHHHHHHHHHCSSCBCCTTTCCCBCCS
T ss_pred cCCCCCccCCccccccCCCeEECCCC-----ChhhHHHHHHHHHcCCCCcCCCCCCCcccch
Confidence 356889999987754332 6678876 588999999999876 458999999987653
No 12
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=97.88 E-value=1e-05 Score=62.70 Aligned_cols=50 Identities=28% Similarity=0.505 Sum_probs=40.9
Q ss_pred CCCCcceeeccccCCCCCceecc-cCCCCcccccCHHHHHHHHHhcCCcccccccceee
Q 014057 264 EEEAVCRICFIELGEGFDALKME-CGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 321 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~P-C~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~ 321 (431)
+++..|.||++... ++...| |. +.+|+.|+.+|+..++...|++|+..+.
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 13 PDELLCLICKDIMT---DAVVIPCCG-----NSYCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp CGGGSCSSSCCCCT---TCEECSSSC-----CEECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred CCCCCCcCCChHHh---CCeEcCCCC-----CHHHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 35689999987763 477788 76 5789999999999887789999999744
No 13
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.87 E-value=8.6e-06 Score=60.89 Aligned_cols=51 Identities=22% Similarity=0.477 Sum_probs=39.2
Q ss_pred CCCCcceeeccccCCC----CCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceee
Q 014057 264 EEEAVCRICFIELGEG----FDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 321 (431)
Q Consensus 264 Eee~vCRICl~e~~e~----~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~ 321 (431)
+++..|.||++...+. ......+|. +.+|..|+.+|+.. +..|++|+..+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKIN 67 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSS-----CEEEHHHHHHHHHH--CSSCTTTCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCC-----ChhcHHHHHHHHHc--CCCCCCCCCccC
Confidence 3568899999876432 112567886 58999999999987 668999998865
No 14
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.85 E-value=2e-05 Score=61.57 Aligned_cols=48 Identities=23% Similarity=0.542 Sum_probs=39.4
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 321 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~ 321 (431)
++...|.||+.... ++..+||. +.+|..|+.+|+.. ...|++|+..+.
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~ 60 (81)
T 2csy_A 13 EIPFRCFICRQAFQ---NPVVTKCR-----HYFCESCALEHFRA--TPRCYICDQPTG 60 (81)
T ss_dssp CCCSBCSSSCSBCC---SEEECTTS-----CEEEHHHHHHHHHH--CSBCSSSCCBCC
T ss_pred CCCCCCcCCCchhc---CeeEccCC-----CHhHHHHHHHHHHC--CCcCCCcCcccc
Confidence 35689999987763 46778887 57899999999976 678999999976
No 15
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.84 E-value=7.9e-06 Score=64.81 Aligned_cols=51 Identities=20% Similarity=0.455 Sum_probs=36.5
Q ss_pred CCcceeeccccCC-----------CCCceecc-cCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 266 EAVCRICFIELGE-----------GFDALKME-CGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 266 e~vCRICl~e~~e-----------~~~~Li~P-C~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
+..|.||+++..+ ++....+| |. +.+|..|+.+|+..+ .+|++|++.+...
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~-----H~FH~~Ci~~Wl~~~--~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECN-----HSFHNCCMSLWVKQN--NRCPLCQQDWVVQ 77 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTS-----CEEEHHHHHHHTTTC--CBCTTTCCBCCEE
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCC-----CccChHHHHHHHHhC--CCCCCcCCCcchh
Confidence 4557777766532 23344555 65 689999999999874 5899999997654
No 16
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.75 E-value=1.5e-05 Score=60.96 Aligned_cols=49 Identities=20% Similarity=0.430 Sum_probs=39.3
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
++..|.||++... ++...||. +.+|+.|+.+|+.. +..|++|+..+...
T Consensus 14 ~~~~C~IC~~~~~---~~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 14 TVPECAICLQTCV---HPVSLPCK-----HVFCYLCVKGASWL--GKRCALCRQEIPED 62 (71)
T ss_dssp SCCBCSSSSSBCS---SEEEETTT-----EEEEHHHHHHCTTC--SSBCSSSCCBCCHH
T ss_pred CCCCCccCCcccC---CCEEccCC-----CHHHHHHHHHHHHC--CCcCcCcCchhCHh
Confidence 5678999997753 46778876 57999999999975 47999999997643
No 17
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.73 E-value=2.5e-05 Score=59.40 Aligned_cols=51 Identities=27% Similarity=0.581 Sum_probs=40.2
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHh-cCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI-KGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~-sgs~~CEICk~~y~n 322 (431)
+++..|.||++... ++...||. +.+|..|+.+|+.. .+...|++|+..+..
T Consensus 18 ~~~~~C~IC~~~~~---~~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 18 QEEVICPICLDILQ---KPVTIDCG-----HNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCBCTTTCSBCS---SEEECTTC-----CEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred ccCCEeccCCcccC---CeEEcCCC-----ChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 45689999997753 46677876 57899999999974 356799999998654
No 18
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=97.65 E-value=1.6e-05 Score=59.95 Aligned_cols=52 Identities=21% Similarity=0.475 Sum_probs=39.8
Q ss_pred CCCCcceeeccccCCC----CCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEG----FDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~----~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
+++..|.||++...+. ......+|. +.+|..|+.+|+..+ ..|++|+..+..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~~--~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKNA--NTCPTCRKKINH 63 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTS-----CEEEHHHHHHHHHHC--SBCTTTCCBCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCC-----ChHhHHHHHHHHHcC--CCCCCCCCccCh
Confidence 4568999999776431 222567887 579999999999874 689999998764
No 19
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=97.64 E-value=3e-05 Score=58.30 Aligned_cols=51 Identities=25% Similarity=0.564 Sum_probs=39.8
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
+++..|.||++... +.....||. +.+|..|+.+|+.. +..|++|+..+..+
T Consensus 3 ~~~~~C~IC~~~~~--~~~~~~~C~-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~~ 53 (68)
T 1chc_A 3 TVAERCPICLEDPS--NYSMALPCL-----HAFCYVCITRWIRQ--NPTCPLCKVPVESV 53 (68)
T ss_dssp CCCCCCSSCCSCCC--SCEEETTTT-----EEESTTHHHHHHHH--SCSTTTTCCCCCCE
T ss_pred CCCCCCeeCCcccc--CCcEecCCC-----CeeHHHHHHHHHhC--cCcCcCCChhhHhh
Confidence 45678999998763 224678886 57899999999976 46899999987643
No 20
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=97.63 E-value=3.4e-05 Score=65.10 Aligned_cols=51 Identities=20% Similarity=0.338 Sum_probs=37.5
Q ss_pred CCcceeeccccCCC--------------C-CceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 266 EAVCRICFIELGEG--------------F-DALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 266 e~vCRICl~e~~e~--------------~-~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
+..|-||++...+. + ....++|. +.+|..|+.+|+.. +.+|++|+.+|...
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~-----H~FH~~Ci~~Wl~~--~~~CP~Cr~~~~~~ 102 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCN-----HAFHFHCISRWLKT--RQVCPLDNREWEFQ 102 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTS-----CEEEHHHHHHHHTT--CSBCSSSCSBCCEE
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccC-----cEECHHHHHHHHHc--CCcCcCCCCcceee
Confidence 46788998765421 1 13446776 68999999999976 67899999997643
No 21
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.63 E-value=8.8e-05 Score=57.18 Aligned_cols=50 Identities=26% Similarity=0.581 Sum_probs=40.3
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhc----CCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIK----GNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~s----gs~~CEICk~~y~n 322 (431)
++..|.||+.... ++...||. +.+|..|+.+|+... +...|++|+..+..
T Consensus 18 ~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 18 EEVTCPICLELLK---EPVSADCN-----HSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp TTTSCTTTCSCCS---SCEECTTS-----CCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred cCCCCcCCChhhC---cceeCCCC-----CHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 4678999987753 46678876 578999999999885 37899999998763
No 22
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=97.61 E-value=5.1e-05 Score=60.35 Aligned_cols=50 Identities=28% Similarity=0.505 Sum_probs=41.6
Q ss_pred CCCCcceeeccccCCCCCceecc-cCCCCcccccCHHHHHHHHHhcCCcccccccceee
Q 014057 264 EEEAVCRICFIELGEGFDALKME-CGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 321 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~P-C~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~ 321 (431)
+++..|.||++... ++...| |. +.+++.|+.+|+..++...|++|+..+.
T Consensus 11 ~~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 11 PDELLCLICKDIMT---DAVVIPCCG-----NSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CTTTEETTTTEECS---SCEECTTTC-----CEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred CcCCCCCCCChhhc---CceECCCCC-----CHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 45689999997663 577788 66 5789999999999888899999999873
No 23
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.61 E-value=1.8e-05 Score=59.91 Aligned_cols=47 Identities=26% Similarity=0.692 Sum_probs=38.4
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
+...|.||++... + ..+||. +.+|..|+.+|+. .+..|++|+..+..
T Consensus 14 ~~~~C~IC~~~~~---~-~~~~Cg-----H~fc~~Ci~~~~~--~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 14 DEEECCICMDGRA---D-LILPCA-----HSFCQKCIDKWSD--RHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCCSSSCCSCC---S-EEETTT-----EEECHHHHHHSSC--CCSSCHHHHHCTTC
T ss_pred CCCCCeeCCcCcc---C-cccCCC-----CcccHHHHHHHHH--CcCcCCCcCCcccC
Confidence 4688999998764 2 678886 5799999999997 57899999988664
No 24
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.61 E-value=4.5e-05 Score=57.40 Aligned_cols=50 Identities=22% Similarity=0.569 Sum_probs=39.1
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
+++..|.||++... ++...+|. +.+|+.|+.+|+. +++..|++|+..+..
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 13 EDKYKCEKCHLVLC---SPKQTECG-----HRFCESCMAALLS-SSSPKCTACQESIVK 62 (66)
T ss_dssp CCCEECTTTCCEES---SCCCCSSS-----CCCCHHHHHHHHT-TSSCCCTTTCCCCCT
T ss_pred CcCCCCCCCChHhc---CeeECCCC-----CHHHHHHHHHHHH-hCcCCCCCCCcCCCh
Confidence 45689999987763 35557776 4789999999997 456789999998653
No 25
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.58 E-value=0.00011 Score=54.64 Aligned_cols=45 Identities=27% Similarity=0.620 Sum_probs=35.7
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhc-CCcccccc
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIK-GNKTCEVC 316 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~s-gs~~CEIC 316 (431)
+++..|.||++... ++...||. +.+|+.|+.+|+... +...|++|
T Consensus 18 ~~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQ---KPVTIDCG-----HNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCS---SCEECTTS-----SEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhC---CeEEeCCC-----CcchHHHHHHHHHcCCCCCcCcCC
Confidence 45689999997763 46677876 578999999999854 46789998
No 26
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.56 E-value=9.5e-05 Score=56.98 Aligned_cols=51 Identities=29% Similarity=0.656 Sum_probs=40.6
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHh----cCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI----KGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~----sgs~~CEICk~~y~n 322 (431)
+++..|.||+.... ++...||. +.+|..|+.+|+.. .+...|++|+..+..
T Consensus 17 ~~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 17 KEEVTCPICLELLT---QPLSLDCG-----HSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCTTTCSCCS---SCBCCSSS-----CCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred cCCCCCCCCCcccC---CceeCCCC-----CHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 34688999997763 45667876 47899999999987 457899999999764
No 27
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.55 E-value=8.5e-05 Score=53.85 Aligned_cols=45 Identities=29% Similarity=0.778 Sum_probs=35.3
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHh-cCCcccccc
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI-KGNKTCEVC 316 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~-sgs~~CEIC 316 (431)
+++..|.||++... ++..++|. +.+|..|+.+|+.. ++...|++|
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLK---EPVIIECG-----HNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCS---SCCCCSSC-----CCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccC---ccEeCCCC-----CccCHHHHHHHHHhcCCCCCCCCC
Confidence 35688999997764 35667876 57899999999874 467899998
No 28
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.54 E-value=8.1e-05 Score=57.00 Aligned_cols=49 Identities=29% Similarity=0.490 Sum_probs=38.8
Q ss_pred CCCcceeeccccCCCCCceec-ccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 265 EEAVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~-PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
++..|.||++... ++... +|. +.+|+.|+.+|+.. +..|++|+..+...
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~~ 63 (72)
T 2djb_A 14 PYILCSICKGYLI---DATTITECL-----HTFCKSCIVRHFYY--SNRCPKCNIVVHQT 63 (72)
T ss_dssp GGGSCTTTSSCCS---SCEECSSSC-----CEECHHHHHHHHHH--CSSCTTTCCCCCSS
T ss_pred CCCCCCCCChHHH---CcCEECCCC-----CHHHHHHHHHHHHc--CCcCCCcCcccCcc
Confidence 4689999987764 35554 887 57899999999976 67899999997653
No 29
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=97.48 E-value=3.6e-05 Score=56.64 Aligned_cols=51 Identities=22% Similarity=0.477 Sum_probs=39.1
Q ss_pred CCCcceeeccccCCC----CCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEG----FDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~----~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
++..|.||++...+. ......+|. +.+|..|+.+|+.. +..|++|+..+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKINH 56 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTS-----CEEEHHHHHHHHHH--CSBCTTTCCBCTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCC-----CchhHHHHHHHHHc--CCCCCCCCccCCc
Confidence 457899999876431 123567887 57999999999987 6799999998764
No 30
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.48 E-value=6.7e-05 Score=60.06 Aligned_cols=53 Identities=23% Similarity=0.468 Sum_probs=39.8
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
+....|-||++.... +. .-+ .|. +.+|..|+.+||+.+++.+|++|++.+...
T Consensus 13 ~~i~~C~IC~~~i~~-g~--~C~-~C~---h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~ 65 (74)
T 2ct0_A 13 DAVKICNICHSLLIQ-GQ--SCE-TCG---IRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 65 (74)
T ss_dssp SSSCBCSSSCCBCSS-SE--ECS-SSC---CEECHHHHHHHSTTCSSCCCTTTCSCCCSC
T ss_pred CCCCcCcchhhHccc-CC--ccC-CCC---chhhHHHHHHHHHhcCCCCCCCCcCcCCCC
Confidence 346889999977642 21 111 554 578999999999988789999999887643
No 31
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=97.46 E-value=7.7e-05 Score=57.58 Aligned_cols=51 Identities=24% Similarity=0.404 Sum_probs=40.7
Q ss_pred CCCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 263 PEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
..++..|.||++... ++...+|. +.+++.|+.+|+.. +...|++|+..+..
T Consensus 5 ~~~~~~C~IC~~~~~---~Pv~~~Cg-----H~fc~~Ci~~~~~~-~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 5 FPEYFRCPISLELMK---DPVIVSTG-----QTYERSSIQKWLDA-GHKTCPKSQETLLH 55 (78)
T ss_dssp CSSSSSCTTTSCCCS---SEEEETTT-----EEEEHHHHHHHHTT-TCCBCTTTCCBCSS
T ss_pred CcccCCCCCcccccc---CCEEcCCC-----CeecHHHHHHHHHH-CcCCCCCCcCCCCh
Confidence 345789999997653 47778876 57899999999963 57899999998753
No 32
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=97.31 E-value=4.1e-05 Score=66.04 Aligned_cols=51 Identities=20% Similarity=0.389 Sum_probs=0.4
Q ss_pred CCcceeeccccCC-------------CCCce--ecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 266 EAVCRICFIELGE-------------GFDAL--KMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 266 e~vCRICl~e~~e-------------~~~~L--i~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
++.|-||+++..+ +++.. ..+|. +.+|..|+.+|+.. +..|++|+.+|...
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~-----H~FH~~CI~~Wl~~--~~~CP~Cr~~~~~~ 113 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCN-----HAFHFHCISRWLKT--RQVCPLDNREWEFQ 113 (117)
T ss_dssp C------------------------------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcC-----ceEcHHHHHHHHHc--CCcCCCCCCeeeee
Confidence 3679999877643 11112 23555 68999999999987 67899999997653
No 33
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=97.20 E-value=7.2e-05 Score=57.49 Aligned_cols=51 Identities=29% Similarity=0.599 Sum_probs=40.3
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhc-----CCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIK-----GNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~s-----gs~~CEICk~~y~n 322 (431)
+++..|.||++... ++...||. +.+|..|+.+|+... +...|++|+..+..
T Consensus 10 ~~~~~C~IC~~~~~---~p~~l~Cg-----H~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 10 QEEVTCPICLELLT---EPLSLDCG-----HSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCEETTTTEECS---SCCCCSSS-----CCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred ccCCCCcCCCcccC---CeeECCCC-----CHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 35689999997763 45667876 578999999999873 47899999999764
No 34
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=97.04 E-value=0.00031 Score=71.24 Aligned_cols=55 Identities=29% Similarity=0.660 Sum_probs=41.3
Q ss_pred CCCCcceeeccccCCCCCceecccC---CCCcccccCHHHHHHHHHhcCC---------cccccccceee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECG---CKGELAFAHRECAVKWFSIKGN---------KTCEVCKQEVE 321 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~---CkGsLk~VH~~CL~kW~~~sgs---------~~CEICk~~y~ 321 (431)
++...|-||+....+.+..-...|. |+ +.+|..||.+||+...+ ..|+.|++.+.
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~---h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCV---LKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCC---CCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred cCCccCcccceeecCCCCCccccccCCccC---CccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 3568999999887653444445564 65 68999999999987543 58999999765
No 35
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=97.02 E-value=0.00013 Score=62.89 Aligned_cols=48 Identities=21% Similarity=0.589 Sum_probs=38.6
Q ss_pred CCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 266 EAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 266 e~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
+..|.||++... ++...||+ +.+|..|+.+|+.. +..|++|+..+...
T Consensus 53 ~~~C~iC~~~~~---~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 53 ELQCIICSEYFI---EAVTLNCA-----HSFCSYCINEWMKR--KIECPICRKDIKSK 100 (138)
T ss_dssp HSBCTTTCSBCS---SEEEETTS-----CEEEHHHHHHHTTT--CSBCTTTCCBCCCE
T ss_pred cCCCcccCcccC---CceECCCC-----CCccHHHHHHHHHc--CCcCCCCCCcCCCC
Confidence 467999997763 47778886 57999999999975 57899999987543
No 36
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=97.00 E-value=0.00019 Score=58.63 Aligned_cols=49 Identities=24% Similarity=0.574 Sum_probs=40.0
Q ss_pred CCCcceeeccccCCCCCcee-cccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALK-MECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li-~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
++..|.||++... ++.. .+|. +.+|+.|+.+|+..++ ..|++|+..+..
T Consensus 21 ~~~~C~IC~~~~~---~p~~~~~Cg-----H~FC~~Ci~~~~~~~~-~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 21 EVFRCFICMEKLR---DARLCPHCS-----KLCCFSCIRRWLTEQR-AQCPHCRAPLQL 70 (100)
T ss_dssp HHTBCTTTCSBCS---SEEECTTTC-----CEEEHHHHHHHHHHTC-SBCTTTCCBCCG
T ss_pred CCCCCccCCcccc---CccccCCCC-----ChhhHHHHHHHHHHCc-CCCCCCCCcCCH
Confidence 4588999997763 4666 8887 5789999999998854 789999999754
No 37
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=96.91 E-value=0.00026 Score=59.51 Aligned_cols=49 Identities=16% Similarity=0.373 Sum_probs=39.3
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
++..|.||++... ++...||. +.+|+.|+.+|+. .+...|++|+..+..
T Consensus 51 ~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVF---RPITTVCQ-----HNVCKDCLDRSFR-AQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCS---SEEECTTS-----CEEEHHHHHHHHH-TTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHc---CcEEeeCC-----CcccHHHHHHHHh-HCcCCCCCCCccCCC
Confidence 4578999997763 57778886 4689999999998 355699999999764
No 38
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=96.86 E-value=0.00035 Score=61.47 Aligned_cols=49 Identities=27% Similarity=0.628 Sum_probs=38.6
Q ss_pred CCCcceeeccccCCCCCceec-ccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~-PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
++..|.||++... ++... ||. +.+|..|+.+|+.. ++..|++|+..+..
T Consensus 53 ~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 53 SELMCPICLDMLK---NTMTTKECL-----HRFCADCIITALRS-GNKECPTCRKKLVS 102 (165)
T ss_dssp HHHBCTTTSSBCS---SEEEETTTC-----CEEEHHHHHHHHHT-TCCBCTTTCCBCCS
T ss_pred CCCCCcccChHhh---CcCEeCCCC-----ChhHHHHHHHHHHh-CcCCCCCCCCcCCC
Confidence 4579999987764 35554 776 57899999999984 46789999999753
No 39
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.86 E-value=0.00048 Score=51.51 Aligned_cols=52 Identities=17% Similarity=0.364 Sum_probs=38.1
Q ss_pred CCCcceeecc-ccCCCCC-ceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFI-ELGEGFD-ALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~-e~~e~~~-~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
++..|.||++ ...+... .+..+|. +.+|+.|+.+|+.. +...|++|+..+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCG-----HTLCESCVDLLFVR-GAGNCPECGTPLRK 55 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTC-----CCEEHHHHHHHHHT-TSSSCTTTCCCCSS
T ss_pred CCCcCCcCCCCccCCCccCeecCCCC-----CHhHHHHHHHHHHc-CCCcCCCCCCcccc
Confidence 4578999997 4432221 2457887 47899999999874 56789999998764
No 40
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=96.83 E-value=0.00072 Score=53.90 Aligned_cols=57 Identities=23% Similarity=0.388 Sum_probs=44.2
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeeccc
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENLPV 325 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~pv 325 (431)
+++..|-||++... ..+....||.|. +.+++.|+.+|... +...|++|+..|...++
T Consensus 9 ~~~~~CpICle~~~-~~d~~~~p~~CG---H~fC~~Cl~~~~~~-~~~~CP~CR~~~~~~~~ 65 (78)
T 1e4u_A 9 EDPVECPLCMEPLE-IDDINFFPCTCG---YQICRFCWHRIRTD-ENGLCPACRKPYPEDPA 65 (78)
T ss_dssp CCCCBCTTTCCBCC-TTTTTCCSSTTS---CCCCHHHHHHHTTS-SCSBCTTTCCBCSSCSS
T ss_pred ccCCcCCccCccCc-cccccccccCCC---CCcCHHHHHHHHhc-CCCCCCCCCCccCCCch
Confidence 35688999998664 244667888884 57899999998754 67899999999987654
No 41
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=96.81 E-value=0.00031 Score=56.73 Aligned_cols=48 Identities=25% Similarity=0.514 Sum_probs=38.0
Q ss_pred CCCcceeeccccCCCCCceec-ccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~-PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
++..|.||++... ++... +|. +.+|..|+.+|+.. +..|++|+..+..
T Consensus 21 ~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFN---IAMIIPQCS-----HNYCSLCIRKFLSY--KTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCS---SEEECTTTC-----CEEEHHHHHHHHTT--CCBCTTTCCBCCG
T ss_pred CCCCcccCChhhC---CcCEECCCC-----CHhhHHHHHHHHHC--CCCCCCCCCcCCh
Confidence 4588999997764 35555 777 57899999999975 5799999998764
No 42
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=96.78 E-value=0.00038 Score=57.63 Aligned_cols=54 Identities=20% Similarity=0.432 Sum_probs=41.4
Q ss_pred CCCcceeeccccCCC----CCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeeccc
Q 014057 265 EEAVCRICFIELGEG----FDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENLPV 325 (431)
Q Consensus 265 ee~vCRICl~e~~e~----~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~pv 325 (431)
++..|-||++...+. .....++|. +.+|..|+.+|+.. +..|++|+..+....+
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~~~l 63 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKINHKRY 63 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTC-----CEEEHHHHHHHHTT--CSBCTTTCCBCTTTCE
T ss_pred CCCCCcccChhhhCccccccCeEecCCC-----ChhhHHHHHHHHHh--CCCCCCCCCcCccccc
Confidence 468899999776432 223678887 58999999999976 4599999999876544
No 43
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.72 E-value=0.00078 Score=54.89 Aligned_cols=49 Identities=22% Similarity=0.618 Sum_probs=38.4
Q ss_pred CCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhc-CCcccccccceeee
Q 014057 266 EAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIK-GNKTCEVCKQEVEN 322 (431)
Q Consensus 266 e~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~s-gs~~CEICk~~y~n 322 (431)
...|.||+.... ++...||. +.+|..|+.+|+..+ +...|++|+..+..
T Consensus 21 ~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 21 ILECPICLELIK---EPVSTKCD-----HIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HTSCSSSCCCCS---SCCBCTTS-----CCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCcccChhhc---CeEECCCC-----CHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 478999997653 45667876 578999999999864 45689999998653
No 44
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=96.66 E-value=0.00062 Score=55.89 Aligned_cols=48 Identities=25% Similarity=0.551 Sum_probs=38.7
Q ss_pred CCCcceeeccccCCCCCceec-ccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~-PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
++..|.||++... ++... +|. +.+|..|+.+|+.. +..|++|+..+..
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~~Cg-----H~fC~~Ci~~~~~~--~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 14 PHLMCVLCGGYFI---DATTIIECL-----HSFCKTCIVRYLET--SKYCPICDVQVHK 62 (108)
T ss_dssp GGTBCTTTSSBCS---SEEEETTTC-----CEEEHHHHHHHHTS--CSBCTTTCCBSCS
T ss_pred CcCCCccCChHHh---CcCEeCCCC-----ChhhHHHHHHHHHh--CCcCcCCCccccc
Confidence 4688999987763 46665 887 57899999999976 4899999999764
No 45
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=96.50 E-value=0.00076 Score=59.46 Aligned_cols=50 Identities=16% Similarity=0.407 Sum_probs=39.8
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
++..|.||++... ++...||. +.+++.|+.+|+.. +...|++|+..+...
T Consensus 77 ~~~~C~IC~~~~~---~pv~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 77 QSFMCVCCQELVY---QPVTTECF-----HNVCKDCLQRSFKA-QVFSCPACRHDLGQN 126 (150)
T ss_dssp HHTBCTTTSSBCS---SEEECTTS-----CEEEHHHHHHHHHT-TCCBCTTTCCBCCTT
T ss_pred cCCEeecCChhhc---CCEEcCCC-----CchhHHHHHHHHHh-CCCcCCCCCccCCCC
Confidence 4578999987653 57778887 47899999999985 456899999997654
No 46
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=96.49 E-value=0.0016 Score=54.36 Aligned_cols=51 Identities=25% Similarity=0.531 Sum_probs=39.9
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
+++..|.||+.... ++...+|. +.+++.|+.+|+..++. .|++|+..+...
T Consensus 16 ~~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~~~-~CP~Cr~~~~~~ 66 (118)
T 3hct_A 16 ESKYECPICLMALR---EAVQTPCG-----HRFCKACIIKSIRDAGH-KCPVDNEILLEN 66 (118)
T ss_dssp CGGGBCTTTCSBCS---SEEECTTS-----CEEEHHHHHHHHHHHCS-BCTTTCCBCCGG
T ss_pred CCCCCCCcCChhhc---CeEECCcC-----ChhhHHHHHHHHhhCCC-CCCCCCCCcCHH
Confidence 35689999997653 46677876 57899999999987543 899999987653
No 47
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=96.30 E-value=0.0018 Score=53.43 Aligned_cols=52 Identities=21% Similarity=0.476 Sum_probs=38.8
Q ss_pred CCCCcceeeccccCCC----CCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEG----FDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~----~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
+++..|-||++...+. ......+|. +.+|..|+.+|+.. +..|++|+..+..
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~Cg-----H~fc~~Ci~~~~~~--~~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECG-----HVFCSQCLRDSLKN--ANTCPTCRKKINH 125 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTS-----BEEEHHHHHHHHHH--CSBCTTTCCBCCG
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCC-----ChhhHHHHHHHHHc--CCCCCCCCCcCCh
Confidence 3567899999766431 122456665 68999999999987 5699999998764
No 48
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=96.17 E-value=0.00062 Score=56.38 Aligned_cols=49 Identities=20% Similarity=0.508 Sum_probs=39.6
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
++..|.||+.... ++...||. +.+|..|+.+|+.. +...|++|+..+..
T Consensus 14 ~~~~C~iC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 14 SECQCGICMEILV---EPVTLPCN-----HTLCKPCFQSTVEK-ASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHBCTTTCSBCS---SCEECTTS-----CEECHHHHCCCCCT-TTSBCTTTCCBCHH
T ss_pred CCCCCccCCcccC---ceeEcCCC-----CHHhHHHHHHHHhH-CcCCCCCCCcccCc
Confidence 4688999997653 57778887 57899999999964 46799999999764
No 49
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=96.17 E-value=0.0054 Score=50.60 Aligned_cols=50 Identities=10% Similarity=0.064 Sum_probs=39.5
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
.++..|-||++-. .++++.+|. | +-+-+.|+.+|+.. +.+|++|+..+..
T Consensus 20 p~~~~CpI~~~~m---~dPV~~~cG--~--htf~r~cI~~~l~~--~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 20 CDEFLDPIMSTLM---CDPVVLPSS--R--VTVDRSTIARHLLS--DQTDPFNRSPLTM 69 (98)
T ss_dssp CTTTBCTTTCSBC---SSEEECTTT--C--CEEEHHHHHHHTTT--SCBCTTTCSBCCT
T ss_pred cHhcCCcCccccc---cCCeECCCC--C--eEECHHHHHHHHHh--CCCCCCCCCCCCh
Confidence 4679999998765 358888876 1 25679999999986 5689999998764
No 50
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=96.08 E-value=0.0018 Score=53.66 Aligned_cols=49 Identities=20% Similarity=0.512 Sum_probs=39.1
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
++..|.||++... ++...+|. +.+|..|+.+|+... ...|++|+..+..
T Consensus 22 ~~~~C~IC~~~~~---~p~~~~Cg-----H~fC~~Ci~~~~~~~-~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 22 KSISCQICEHILA---DPVETSCK-----HLFCRICILRCLKVM-GSYCPSCRYPCFP 70 (116)
T ss_dssp HHTBCTTTCSBCS---SEEECTTS-----CEEEHHHHHHHHHHT-CSBCTTTCCBCCG
T ss_pred CCCCCCCCCcHhc---CcEEcCCC-----CcccHHHHHHHHhHC-cCcCCCCCCCCCH
Confidence 4588999987763 46677876 578999999999874 4689999998764
No 51
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=96.08 E-value=0.0068 Score=48.45 Aligned_cols=49 Identities=12% Similarity=0.133 Sum_probs=39.5
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
.++..|-||++-.. +++..||+ +-+-+.|+.+|+.. +.+|++|+..+..
T Consensus 12 p~~~~CpI~~~~m~---dPV~~~cG-----htf~r~~I~~~l~~--~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 12 PDEFRDPLMDTLMT---DPVRLPSG-----TVMDRSIILRHLLN--SPTDPFNRQMLTE 60 (85)
T ss_dssp CTTTBCTTTCSBCS---SEEECTTS-----CEEEHHHHHHHHHH--CSBCTTTCCBCCG
T ss_pred chheECcccCchhc---CCeECCCC-----CEECHHHHHHHHhc--CCCCCCCcCCCCh
Confidence 35799999987653 58889975 35779999999985 5789999998654
No 52
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=96.08 E-value=0.0034 Score=64.08 Aligned_cols=49 Identities=22% Similarity=0.553 Sum_probs=39.9
Q ss_pred CCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 266 EAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 266 e~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
...|.||++.. .++...||.. .+|..|+.+|+.. +...|++|+..+...
T Consensus 332 ~~~C~ICle~~---~~pv~lpCGH-----~FC~~Ci~~wl~~-~~~~CP~CR~~i~~~ 380 (389)
T 2y1n_A 332 FQLCKICAEND---KDVKIEPCGH-----LMCTSCLTSWQES-EGQGCPFCRCEIKGT 380 (389)
T ss_dssp SSBCTTTSSSB---CCEEEETTCC-----EECHHHHHHHHHH-TCSBCTTTCCBCCEE
T ss_pred CCCCCccCcCC---CCeEEeCCCC-----hhhHHHHHHHHhc-CCCCCCCCCCccCCc
Confidence 47999998765 3577899984 5699999999974 567899999998765
No 53
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=95.92 E-value=0.0035 Score=47.48 Aligned_cols=54 Identities=20% Similarity=0.362 Sum_probs=38.4
Q ss_pred CCCCCCCcceeeccccCCCCCcee--cccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 261 DIPEEEAVCRICFIELGEGFDALK--MECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 261 di~Eee~vCRICl~e~~e~~~~Li--~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
+..+.+..|.||++... +..+ .||.-. .+-+.|+.+|... +..|++|+..+..+
T Consensus 2 ~~~~~~~~C~IC~~~~~---~~~~~~~pCgH~----~~C~~C~~~~~~~--~~~CPiCR~~i~~~ 57 (63)
T 2vje_B 2 DCQNLLKPCSLCEKRPR---DGNIIHGRTGHL----VTCFHCARRLKKA--GASCPICKKEIQLV 57 (63)
T ss_dssp -CGGGGSBCTTTSSSBS---CEEEEETTEEEE----EECHHHHHHHHHT--TCBCTTTCCBCCEE
T ss_pred CCCCcCCCCcccCCcCC---CeEEEecCCCCH----hHHHHHHHHHHHh--CCcCCCcCchhhce
Confidence 44456789999997642 3433 498731 2678999999865 47899999998643
No 54
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=95.84 E-value=0.01 Score=49.11 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=39.6
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
.++..|-||+.-. .++++.||+ +-+-+.|+.+|+.. +.+|++|+..+..
T Consensus 27 p~~~~CpI~~~~m---~dPV~~~cG-----htf~r~~I~~~l~~--~~~cP~~~~~l~~ 75 (100)
T 2kre_A 27 PDEFRDPLMDTLM---TDPVRLPSG-----TIMDRSIILRHLLN--SPTDPFNRQTLTE 75 (100)
T ss_dssp STTTBCTTTCSBC---SSEEEETTT-----EEEEHHHHHHHTTS--CSBCSSSCCBCCT
T ss_pred cHhhCCcCccCcc---cCCeECCCC-----CEEchHHHHHHHHc--CCCCCCCCCCCCh
Confidence 4679999998765 358889975 35789999999974 6789999998763
No 55
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.51 E-value=0.015 Score=44.77 Aligned_cols=50 Identities=18% Similarity=0.377 Sum_probs=37.2
Q ss_pred CCCCCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 261 DIPEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 261 di~Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
...+++..|.||++.. .+.+.+||... .+-..|+.+ ...|++|+..+...
T Consensus 10 ~~~~~~~~C~IC~~~~---~~~v~~pCgH~----~~C~~C~~~------~~~CP~CR~~i~~~ 59 (68)
T 2ea5_A 10 PSEENSKDCVVCQNGT---VNWVLLPCRHT----CLCDGCVKY------FQQCPMCRQFVQES 59 (68)
T ss_dssp CSCCCSSCCSSSSSSC---CCCEETTTTBC----CSCTTHHHH------CSSCTTTCCCCCCE
T ss_pred ccCCCCCCCCCcCcCC---CCEEEECCCCh----hhhHHHHhc------CCCCCCCCcchhce
Confidence 3344578999998764 45788999842 267799883 47899999998764
No 56
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=95.49 E-value=0.0022 Score=49.78 Aligned_cols=45 Identities=24% Similarity=0.615 Sum_probs=36.7
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccc-cCHHHHHHHHHhcCCcccccccceeeec
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAF-AHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~-VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
++..|.||++.. .++...||.. . +...|+.+| ..|++|+..+...
T Consensus 23 ~~~~C~iC~~~~---~~~~~~pCgH-----~~~C~~C~~~~------~~CP~Cr~~i~~~ 68 (74)
T 4ic3_A 23 EEKLCKICMDRN---IAIVFVPCGH-----LVTCKQCAEAV------DKCPMCYTVITFK 68 (74)
T ss_dssp HHTBCTTTSSSB---CCEEEETTCC-----BCCCHHHHTTC------SBCTTTCCBCSEE
T ss_pred cCCCCCCCCCCC---CCEEEcCCCC-----hhHHHHhhhcC------ccCCCcCcCccCc
Confidence 457899999765 3577789973 5 899999999 7899999988754
No 57
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=95.30 E-value=0.011 Score=54.42 Aligned_cols=49 Identities=12% Similarity=0.093 Sum_probs=38.7
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
+...|-||++-. .++++.||. +-+-+.|+.+|+...+.. |++|+..+..
T Consensus 207 ~~~~c~i~~~~~---~dPv~~~~g-----h~f~~~~i~~~~~~~~~~-cP~~~~~~~~ 255 (281)
T 2c2l_A 207 DYLCGKISFELM---REPCITPSG-----ITYDRKDIEEHLQRVGHF-NPVTRSPLTQ 255 (281)
T ss_dssp STTBCTTTCSBC---SSEEECSSC-----CEEETTHHHHHHHHTCSS-CTTTCCCCCG
T ss_pred cccCCcCcCCHh---cCCeECCCC-----CEECHHHHHHHHHHCCCC-CcCCCCCCch
Confidence 568999998765 368899986 356689999999875544 9999998753
No 58
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=95.13 E-value=0.0027 Score=53.02 Aligned_cols=45 Identities=18% Similarity=0.390 Sum_probs=36.6
Q ss_pred CCCcceeeccccCCCCCceec-ccCCCCcccccCHHHHHHHHHhcCCcccccccceee
Q 014057 265 EEAVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 321 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~-PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~ 321 (431)
++..|.||+.... ++... +|. +.+++.|+.+|+. ..|++|+..+.
T Consensus 21 ~~~~C~IC~~~~~---~pv~~~~Cg-----H~fC~~Ci~~~~~----~~CP~Cr~~~~ 66 (117)
T 1jm7_B 21 KLLRCSRCTNILR---EPVCLGGCE-----HIFCSNCVSDCIG----TGCPVCYTPAW 66 (117)
T ss_dssp HTTSCSSSCSCCS---SCBCCCSSS-----CCBCTTTGGGGTT----TBCSSSCCBCS
T ss_pred hCCCCCCCChHhh---CccEeCCCC-----CHHHHHHHHHHhc----CCCcCCCCcCc
Confidence 5689999987663 46666 886 5789999999997 78999999864
No 59
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=94.95 E-value=0.011 Score=44.75 Aligned_cols=49 Identities=29% Similarity=0.472 Sum_probs=36.5
Q ss_pred CCCcceeeccccCCCCCceec--ccCCCCcccc-cCHHHHHHHHHhcCCcccccccceeeec
Q 014057 265 EEAVCRICFIELGEGFDALKM--ECGCKGELAF-AHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~--PC~CkGsLk~-VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
++..|.||++... +.... ||+. . +=.+|+.+|... +..|++|+..+..+
T Consensus 7 ~~~~C~IC~~~~~---~~~~~~~pCgH-----~~~C~~C~~~~~~~--~~~CPiCR~~i~~~ 58 (64)
T 2vje_A 7 AIEPCVICQGRPK---NGCIVHGKTGH-----LMACFTCAKKLKKR--NKPCPVCRQPIQMI 58 (64)
T ss_dssp GGSCCTTTSSSCS---CEEEEETTEEE-----EEECHHHHHHHHHT--TCCCTTTCCCCCEE
T ss_pred CcCCCCcCCCCCC---CEEEECCCCCC-----hhhHHHHHHHHHHc--CCcCCCcCcchhce
Confidence 4578999997643 35555 9873 3 457999999964 56899999988653
No 60
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=94.65 E-value=0.0062 Score=53.16 Aligned_cols=49 Identities=24% Similarity=0.490 Sum_probs=38.4
Q ss_pred CCCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCccccccccee
Q 014057 263 PEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEV 320 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y 320 (431)
.+++..|.||+.... +++..+|. +.+++.|+.+|+.. +...|++|+.+.
T Consensus 28 l~~~~~C~IC~~~~~---~pv~~~Cg-----H~FC~~Ci~~~~~~-~~~~CP~Cr~~~ 76 (141)
T 3knv_A 28 LEAKYLCSACRNVLR---RPFQAQCG-----HRYCSFCLASILSS-GPQNCAACVHEG 76 (141)
T ss_dssp CCGGGBCTTTCSBCS---SEEECTTS-----CEEEHHHHHHHGGG-SCEECHHHHHTT
T ss_pred CCcCcCCCCCChhhc---CcEECCCC-----CccCHHHHHHHHhc-CCCCCCCCCCcc
Confidence 346789999997664 46677776 47899999999964 456899999975
No 61
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=94.51 E-value=0.007 Score=44.51 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=35.2
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
+++..|.||+.... ++..+||. +.+++.|+.+| ...|++|+..+..
T Consensus 4 ~~~~~C~IC~~~~~---~p~~l~Cg-----H~fC~~Ci~~~-----~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 4 FQFLRCQQCQAEAK---CPKLLPCL-----HTLCSGCLEAS-----GMQCPICQAPWPL 49 (56)
T ss_dssp CCCSSCSSSCSSCB---CCSCSTTS-----CCSBTTTCSSS-----SSSCSSCCSSSSC
T ss_pred ccCCCceEeCCccC---CeEEcCCC-----CcccHHHHccC-----CCCCCcCCcEeec
Confidence 35688999987664 46778887 46789998874 6789999998654
No 62
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=94.44 E-value=0.021 Score=54.32 Aligned_cols=50 Identities=24% Similarity=0.527 Sum_probs=38.4
Q ss_pred CCcceeeccccCCCCCceecccC-CCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 266 EAVCRICFIELGEGFDALKMECG-CKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 266 e~vCRICl~e~~e~~~~Li~PC~-CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
-..|.||..-... + .-|. |. ..+|..|+.+|++.+++..|+.|+.....-
T Consensus 180 i~~C~iC~~iv~~-g----~~C~~C~---~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 180 VKICNICHSLLIQ-G----QSCETCG---IRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 230 (238)
T ss_dssp CCBCTTTCSBCSS-C----EECSSSC---CEECHHHHHHHTTTCSSCBCTTTCCBCCSC
T ss_pred CCcCcchhhHHhC-C----cccCccC---hHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Confidence 6889999865432 2 2243 64 478999999999988889999999987654
No 63
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.16 E-value=0.0036 Score=48.49 Aligned_cols=44 Identities=25% Similarity=0.648 Sum_probs=34.1
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccc-cCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAF-AHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~-VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
++..|.||++.. .++...||.. . +...|+.+ ...|++|+..+..
T Consensus 24 ~~~~C~IC~~~~---~~~~~~pCgH-----~~~C~~C~~~------~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 24 EEKLCKICMDRN---IAIVFVPCGH-----LVTCKQCAEA------VDKCPMCYTVITF 68 (75)
T ss_dssp HHHSCSSSCSSC---CCBCCSSSCC-----CCBCHHHHHH------CSBCTTTCCBCCC
T ss_pred CCCCCCcCCCCC---CCEEEecCCC-----HHHHHHHhhC------CCCCccCCceecC
Confidence 457899998764 3577789873 5 78999964 3789999999875
No 64
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=93.69 E-value=0.038 Score=50.80 Aligned_cols=49 Identities=12% Similarity=0.106 Sum_probs=39.6
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
++..|.||+.-+. ++++.||+ +-+=+.|+.+|+...+. +|++|+..+..
T Consensus 105 ~~f~CPI~~elm~---DPV~~~~G-----htfer~~I~~~l~~~~~-tcP~t~~~l~~ 153 (179)
T 2f42_A 105 DYLCGKISFELMR---EPCITPSG-----ITYDRKDIEEHLQRVGH-FDPVTRSPLTQ 153 (179)
T ss_dssp GGGBCTTTCSBCS---SEEECTTS-----CEEEHHHHHHHHHHTCS-BCTTTCCBCCG
T ss_pred HhhcccCccccCC---CCeECCCC-----CEECHHHHHHHHHhCCC-CCCCCcCCCCh
Confidence 5799999987653 58889886 35678999999987655 79999998764
No 65
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=93.58 E-value=0.035 Score=48.75 Aligned_cols=50 Identities=26% Similarity=0.557 Sum_probs=39.0
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
+++..|-||++... +++..+|. +.+...|+.+|+..++ ..|++|+..+..
T Consensus 16 ~~~~~C~IC~~~~~---~pv~~~Cg-----H~fC~~Ci~~~~~~~~-~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 16 ESKYECPICLMALR---EAVQTPCG-----HRFCKACIIKSIRDAG-HKCPVDNEILLE 65 (170)
T ss_dssp CGGGBCTTTCSBCS---SEEECTTS-----CEEEHHHHHHHHHHHC-SBCTTTCCBCCG
T ss_pred CCCCCCCCCChhhc---CcEECCCC-----CHHHHHHHHHHHHhCC-CCCCCCccCcch
Confidence 35689999997763 46666765 5789999999998654 389999988765
No 66
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.48 E-value=0.054 Score=43.78 Aligned_cols=48 Identities=19% Similarity=0.407 Sum_probs=37.8
Q ss_pred CCCCcceeeccccCCCCCceecc-cCCCCcccccCHHHHHHHHHhc----CCccccc--ccce
Q 014057 264 EEEAVCRICFIELGEGFDALKME-CGCKGELAFAHRECAVKWFSIK----GNKTCEV--CKQE 319 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~P-C~CkGsLk~VH~~CL~kW~~~s----gs~~CEI--Ck~~ 319 (431)
.++..|-||+.-.. +++..| |. +-+-+.|+.+|+... +..+|++ |...
T Consensus 5 ~~~~~CPI~~~~~~---dPV~~~~cG-----h~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 5 SSGFTCPITKEEMK---KPVKNKVCG-----HTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SSCCBCTTTCSBCS---SEEEESSSC-----CEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred CcEeECcCcCchhc---CCEEcCCCC-----CeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 35689999987653 588886 76 467899999999875 4679999 9866
No 67
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=90.58 E-value=0.044 Score=54.77 Aligned_cols=45 Identities=24% Similarity=0.725 Sum_probs=36.7
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccc-cCHHHHHHHHHhcCCcccccccceeeec
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAF-AHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~-VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
++..|.||++.. .++...||.. . +...|+.+| ..|++|+..+...
T Consensus 294 ~~~~C~IC~~~~---~~~v~lpCgH-----~~fC~~C~~~~------~~CP~CR~~i~~~ 339 (345)
T 3t6p_A 294 EERTCKVCMDKE---VSVVFIPCGH-----LVVCQECAPSL------RKCPICRGIIKGT 339 (345)
T ss_dssp TTCBCTTTSSSB---CCEEEETTCC-----EEECTTTGGGC------SBCTTTCCBCCEE
T ss_pred CCCCCCccCCcC---CceEEcCCCC-----hhHhHHHHhcC------CcCCCCCCCccCe
Confidence 568999999765 3577789984 4 888999998 6899999998754
No 68
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=90.50 E-value=0.2 Score=49.01 Aligned_cols=51 Identities=20% Similarity=0.333 Sum_probs=40.2
Q ss_pred CCCCcceeeccccCCCCCceec-ccCCCCcccccCHHHHHHHHHhcCCccccc--ccceeee
Q 014057 264 EEEAVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEV--CKQEVEN 322 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~-PC~CkGsLk~VH~~CL~kW~~~sgs~~CEI--Ck~~y~n 322 (431)
..+..|-||+.-.. +++.. .|+ +-+=+.|+.+|+...+...|++ |+..+..
T Consensus 179 ~~el~CPIcl~~f~---DPVts~~CG-----HsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 179 KIELTCPITCKPYE---APLISRKCN-----HVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp BCCSBCTTTSSBCS---SEEEESSSC-----CEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred ceeeECcCccCccc---CCeeeCCCC-----CcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 46689999987663 47664 676 3577899999998877889999 9997653
No 69
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=89.75 E-value=0.19 Score=40.16 Aligned_cols=50 Identities=16% Similarity=0.432 Sum_probs=36.4
Q ss_pred CCCcceeeccccCCCCCcee-cccCCCCcccccCHHHHHHHHHhc---C---Cccccc--cccee
Q 014057 265 EEAVCRICFIELGEGFDALK-MECGCKGELAFAHRECAVKWFSIK---G---NKTCEV--CKQEV 320 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li-~PC~CkGsLk~VH~~CL~kW~~~s---g---s~~CEI--Ck~~y 320 (431)
+...|.||++.... .+.+. .+|. +.+.++|+.+++..+ + ...|+. |+..+
T Consensus 4 ~~~~C~IC~~~~~~-~~~~~l~~Cg-----H~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~ 62 (94)
T 1wim_A 4 GSSGCKLCLGEYPV-EQMTTIAQCQ-----CIFCTLCLKQYVELLIKEGLETAISCPDAACPKQG 62 (94)
T ss_dssp SBCCCSSSCCCCBG-GGEEEETTTT-----EEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCC
T ss_pred CCcCCcccCccccc-ccceEcCCCC-----CcccHHHHHHHHHHHhhcCCcccccCccccCCCCC
Confidence 35789999977542 23333 3787 478999999999764 2 469999 99884
No 70
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=88.11 E-value=0.16 Score=39.48 Aligned_cols=57 Identities=26% Similarity=0.466 Sum_probs=37.8
Q ss_pred CCCCCCCCCcceeeccccCCCCCceecccC-CCCcccccCHHHHHHHHHh--cCCcccccccceeeecc
Q 014057 259 GEDIPEEEAVCRICFIELGEGFDALKMECG-CKGELAFAHRECAVKWFSI--KGNKTCEVCKQEVENLP 324 (431)
Q Consensus 259 ~Edi~Eee~vCRICl~e~~e~~~~Li~PC~-CkGsLk~VH~~CL~kW~~~--sgs~~CEICk~~y~n~p 324 (431)
+++.+..+..|.||..+ ++.+ -|. |. +.+|..||.-.+.. .+.+.|..|...-.-.|
T Consensus 5 ~~~~~~~~~~C~vC~~~----~~ll--~Cd~C~---~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~~p~P 64 (66)
T 2lri_C 5 GQQNLAPGARCGVCGDG----TDVL--RCTHCA---AAFHWRCHFPAGTSRPGTGLRCRSCSGDVTPAP 64 (66)
T ss_dssp TTTCCCTTCCCTTTSCC----TTCE--ECSSSC---CEECHHHHCTTTCCCCSSSCCCTTTTTCCCCCC
T ss_pred cccCCCCCCCcCCCCCC----CeEE--ECCCCC---CceecccCCCccCcCCCCCEECccccCCCccCC
Confidence 34445566889999743 3333 233 43 68999999877754 36799999987644333
No 71
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=87.68 E-value=0.1 Score=41.20 Aligned_cols=46 Identities=28% Similarity=0.714 Sum_probs=35.2
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
++..|.||++.. .+....||... .+=..|+.+| ..|++|+..+...
T Consensus 17 ~~~~C~IC~~~~---~~~v~~pCgH~----~~C~~C~~~~------~~CP~Cr~~i~~~ 62 (79)
T 2yho_A 17 EAMLCMVCCEEE---INSTFCPCGHT----VCCESCAAQL------QSCPVCRSRVEHV 62 (79)
T ss_dssp HHTBCTTTSSSB---CCEEEETTCBC----CBCHHHHTTC------SBCTTTCCBCCEE
T ss_pred CCCEeEEeCccc---CcEEEECCCCH----HHHHHHHHhc------CcCCCCCchhhCe
Confidence 357899998764 45778999842 2567999887 3999999998864
No 72
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=85.21 E-value=0.44 Score=35.99 Aligned_cols=46 Identities=7% Similarity=0.071 Sum_probs=34.8
Q ss_pred CcceeeccccCCCCCceec-ccCCCCcccccCHHHHHHHHHhcCCcccccccceeee
Q 014057 267 AVCRICFIELGEGFDALKM-ECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVEN 322 (431)
Q Consensus 267 ~vCRICl~e~~e~~~~Li~-PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n 322 (431)
..|.||++-.. ++.+. +|. +-+=+.|+++|+..++ +|++++..+..
T Consensus 4 ~~CpIs~~~m~---dPV~~~~sG-----~~yer~~I~~~l~~~~--~cP~t~~~L~~ 50 (61)
T 2bay_A 4 MLCAISGKVPR---RPVLSPKSR-----TIFEKSLLEQYVKDTG--NDPITNEPLSI 50 (61)
T ss_dssp CCCTTTCSCCS---SEEEETTTT-----EEEEHHHHHHHHHHHS--BCTTTCCBCCG
T ss_pred EEecCCCCCCC---CCEEeCCCC-----cEEcHHHHHHHHHhCC--CCcCCcCCCCh
Confidence 67999986653 57777 555 3577899999998754 49999988654
No 73
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=82.07 E-value=0.54 Score=38.31 Aligned_cols=53 Identities=28% Similarity=0.572 Sum_probs=34.4
Q ss_pred CCCCCcceeeccccCCCCCceeccc-CCCCcccccCHHHHHHHHHhcCCcccccccce
Q 014057 263 PEEEAVCRICFIELGEGFDALKMEC-GCKGELAFAHRECAVKWFSIKGNKTCEVCKQE 319 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li~PC-~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~ 319 (431)
.+++..|.||.....+.++.+ .-| .|. ..+|+.|+.-=..-.+.+.|+.|...
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~l-l~CD~C~---~~fH~~Cl~p~~vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVI-LFCDMCN---LAVHQECYGVPYIPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEE-EECSSSC---CCCCHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCCCCE-EECCCCC---chhhcccCCCCccCCCceECccccCc
Confidence 446789999986643223333 333 343 47899998643344578899999765
No 74
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=75.12 E-value=0.19 Score=40.84 Aligned_cols=56 Identities=16% Similarity=0.271 Sum_probs=36.9
Q ss_pred CCCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHH------hcCCcccccccceee
Q 014057 263 PEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS------IKGNKTCEVCKQEVE 321 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~------~sgs~~CEICk~~y~ 321 (431)
.++...|.+|.....+.++.++.==.|. +.+|+.|+.-=+. -.+.+.|..|.....
T Consensus 13 ~e~~~~C~vC~~~~~~~~~~ll~CD~C~---~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 13 MEMGLACVVCRQMTVASGNQLVECQECH---NLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HHHCCSCSSSCCCCCCTTCCEEECSSSC---CEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCCCcCCCCCCCCCCCCCceEECCCCC---CeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 3457899999876543334443322354 5789999875543 357899999987654
No 75
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=71.22 E-value=1 Score=35.45 Aligned_cols=52 Identities=29% Similarity=0.599 Sum_probs=33.6
Q ss_pred CCCCcceeeccccCCCCCceeccc-CCCCcccccCHHHHHHHHHhcCCcccccccce
Q 014057 264 EEEAVCRICFIELGEGFDALKMEC-GCKGELAFAHRECAVKWFSIKGNKTCEVCKQE 319 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC-~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~ 319 (431)
+++..|.||.....+.++.+ .-| .|. ..+|+.|+.-=..-.|.+.|+.|...
T Consensus 14 ~~~~~C~vC~~~~s~~~~~l-l~CD~C~---~~~H~~Cl~~~~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVI-LFCDMCN---LAVHQECYGVPYIPEGQWLCRHCLQS 66 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCE-EECSSSC---CEEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCE-EECCCCC---CccccccCCCCcCCCCCcCCccCcCc
Confidence 45689999987653333333 223 344 58899998643344578899999754
No 76
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=68.09 E-value=2.9 Score=34.57 Aligned_cols=50 Identities=24% Similarity=0.483 Sum_probs=31.1
Q ss_pred CCCCCcceeeccccCCCCCce-ecccCCCCcccccCHHHHHHHHHh--cCCcccccccce
Q 014057 263 PEEEAVCRICFIELGEGFDAL-KMECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQE 319 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~L-i~PC~CkGsLk~VH~~CL~kW~~~--sgs~~CEICk~~ 319 (431)
+++...| ||..... ++.+ ---|.|.. .|+|..|+. +.. .+.+.|+.|...
T Consensus 33 ~~e~~yC-iC~~~~~--g~MI~CD~~dC~~--~WfH~~CVg--l~~~p~g~W~Cp~C~~~ 85 (91)
T 1weu_A 33 PNEPTYC-LCHQVSY--GEMIGCDNPDCSI--EWFHFACVG--LTTKPRGKWFCPRCSQE 85 (91)
T ss_dssp SCCCBCS-TTCCBCC--SCCCCCSCSSCSC--CCCCSTTTT--CSSCCCSSCCCTTTCCC
T ss_pred CCCCcEE-ECCCCCC--CCEeEecCCCCCC--CCEecccCC--cCcCCCCCEECcCccCc
Confidence 4466788 9976532 3222 12244642 599999986 332 367899999764
No 77
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=65.59 E-value=7.3 Score=32.64 Aligned_cols=54 Identities=28% Similarity=0.529 Sum_probs=36.7
Q ss_pred CCCcceeeccccC--CCCCceecccC-CCCcccccCHHHHHHHHHhcCCcccccccceeeec
Q 014057 265 EEAVCRICFIELG--EGFDALKMECG-CKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENL 323 (431)
Q Consensus 265 ee~vCRICl~e~~--e~~~~Li~PC~-CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~ 323 (431)
...+|.||-++.+ +.+++++ -|+ |. --|=+.|.+-=.+ .++..|+.||.+|.-.
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FV-AC~eC~---FPvCrpCyEYErk-eG~q~CpqCktrYkr~ 71 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFV-ACNECG---FPACRPCYEYERR-EGTQNCPQCKTRYKRL 71 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCC-SCSSSC---CCCCHHHHHHHHH-TSCSSCTTTCCCCCCC
T ss_pred CCCccccccCccccCCCCCEEE-eeeccC---ChhhHHHHHHHHh-ccCccccccCCccccc
Confidence 4589999976543 3455554 333 31 1367799876554 4899999999999854
No 78
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=57.66 E-value=2.2 Score=33.45 Aligned_cols=49 Identities=24% Similarity=0.548 Sum_probs=30.7
Q ss_pred CCCCCcceeeccccCCCCCceec--ccCCCCcccccCHHHHHHHHHh--cCCcccccccce
Q 014057 263 PEEEAVCRICFIELGEGFDALKM--ECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQE 319 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li~--PC~CkGsLk~VH~~CL~kW~~~--sgs~~CEICk~~ 319 (431)
+++...| ||..... ++ ++. -|.|. ..++|..|+. +.. .+...|+.|...
T Consensus 13 ~~~~~~C-~C~~~~~--g~-MI~CD~~~C~--~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 13 PNEPTYC-LCHQVSY--GE-MIGCDNPDCS--IEWFHFACVG--LTTKPRGKWFCPRCSQE 65 (71)
T ss_dssp TTSCCCS-TTCCCSC--SS-EECCSCSSCS--CCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred CCCCCEE-ECCCCCC--CC-EeEeeCCCCC--CccEecccCC--cCcCCCCCEECCCCCcc
Confidence 3456788 8976532 33 322 23364 2589999987 332 367899999764
No 79
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=56.35 E-value=3.1 Score=31.39 Aligned_cols=47 Identities=19% Similarity=0.444 Sum_probs=31.1
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHH--hcCCcccccccce
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQE 319 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~--~sgs~~CEICk~~ 319 (431)
++..|.+|... ++.+.-- .|. +.+|..|+..=+. -++...|+.|..+
T Consensus 10 ~~~~C~vC~~~----g~ll~CD-~C~---~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 10 HQDYCEVCQQG----GEIILCD-TCP---RAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCSSCTTTSCC----SSEEECS-SSS---CEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCccCCCC----CcEEECC-CCC---hhhhhhccCCCCCCCCCCceECcccccc
Confidence 56899999753 3343211 343 5899999876432 3467899999754
No 80
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=52.95 E-value=8.1 Score=33.83 Aligned_cols=48 Identities=15% Similarity=0.286 Sum_probs=31.9
Q ss_pred CCCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHH------HH---hcCCcccccccc
Q 014057 263 PEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKW------FS---IKGNKTCEVCKQ 318 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW------~~---~sgs~~CEICk~ 318 (431)
+..+..|++|.++ ++.+ -| .+--+.+|..|+..= -. ..+.+.|.+|..
T Consensus 54 Dg~~~~C~vC~dG----G~Ll--cC--d~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 54 DGMDEQCRWCAEG----GNLI--CC--DFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp TSCBSSCTTTCCC----SEEE--EC--SSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCCcCeecCCC----CeeE--ec--CCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 3356789999754 3333 22 233478999999974 23 357899999954
No 81
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=51.28 E-value=1.5 Score=40.17 Aligned_cols=48 Identities=25% Similarity=0.412 Sum_probs=31.5
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHh--cCCccccccccee
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQEV 320 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~--sgs~~CEICk~~y 320 (431)
++..|.+|..+ |+.+ -|. +=-+.+|..|+..-+.. .|.+.|..|...-
T Consensus 6 ~~~~C~~C~~~----g~ll--~Cd--~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 6 NEDWCAVCQNG----GDLL--CCE--KCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SCSSBTTTCCC----EEEE--ECS--SSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCC----CceE--EcC--CCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 56789999744 2332 332 33368999998665532 4678999998653
No 82
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=50.44 E-value=1.8 Score=38.73 Aligned_cols=47 Identities=23% Similarity=0.440 Sum_probs=31.4
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHh--cCCcccccccce
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQE 319 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~--sgs~~CEICk~~ 319 (431)
++..|.+|..+ |+.+ -|. +=-+.+|..|+..-+.. +|.+.|..|...
T Consensus 3 ~~~~C~~C~~~----g~ll--~Cd--~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~ 51 (184)
T 3o36_A 3 NEDWCAVCQNG----GELL--CCE--KCPKVFHLSCHVPTLTNFPSGEWICTFCRDL 51 (184)
T ss_dssp SCSSCTTTCCC----SSCE--ECS--SSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCCccccCCCC----Ceee--ecC--CCCcccCccccCCCCCCCCCCCEECccccCc
Confidence 46789999744 3333 232 22368999998655543 467999999865
No 83
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=49.22 E-value=2 Score=32.51 Aligned_cols=47 Identities=21% Similarity=0.338 Sum_probs=29.6
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHH--hcCCcccccccce
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQE 319 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~--~sgs~~CEICk~~ 319 (431)
++..|.+|... ++.+ -|. +=-+.+|..|+..=+. -.+.+.|..|...
T Consensus 8 ~~~~C~vC~~~----g~ll--~Cd--~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 8 HMEFCRVCKDG----GELL--CCD--TCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCTTTCCC----SSCB--CCS--SSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCCcCCCCCCC----CCEE--EcC--CCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 56889999753 3333 222 2235789999874332 2367889999764
No 84
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=48.60 E-value=1.8 Score=33.03 Aligned_cols=50 Identities=22% Similarity=0.425 Sum_probs=31.7
Q ss_pred CCCCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHH--hcCCcccccccce
Q 014057 262 IPEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQE 319 (431)
Q Consensus 262 i~Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~--~sgs~~CEICk~~ 319 (431)
.++++..|.||... ++.+.-- .|. +.+|..|+..=+. -.+.+.|..|...
T Consensus 4 ~~~~~~~C~vC~~~----g~ll~CD-~C~---~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 4 AQKNEDECAVCRDG----GELICCD-GCP---RAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp CCSCCCSBSSSSCC----SSCEECS-SCC---CEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCCCCCccCCCC----CCEEEcC-CCC---hhhcccccCCCcCcCCCCCeECccccCc
Confidence 34567899999854 3344221 343 5889999874322 2367889999653
No 85
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=47.72 E-value=3.7 Score=36.18 Aligned_cols=51 Identities=20% Similarity=0.357 Sum_probs=32.8
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHH---hcCCcccccccce
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS---IKGNKTCEVCKQE 319 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~---~sgs~~CEICk~~ 319 (431)
++...| +|.....+ +..++.--.|. .|+|..|+.---. ..+...|+.|...
T Consensus 6 ~~~~~C-~C~~~~~~-~~~mi~Cd~C~---~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDE-SKFYIGCDRCQ---NWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEECCT-TSCEEECTTTC---CEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCCCC-CCCEeECCCCC---chhChhhcCCchhhccCccCeecCCCcch
Confidence 466889 99866432 33444433564 7999999843221 2467899999875
No 86
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=47.45 E-value=9 Score=34.01 Aligned_cols=46 Identities=15% Similarity=0.368 Sum_probs=31.8
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHH---------hcCCcccccccc
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS---------IKGNKTCEVCKQ 318 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~---------~sgs~~CEICk~ 318 (431)
.+..|++|..+ |+++-.- .| -+.+|..||..=+. ..+.+.|.+|..
T Consensus 62 ~~d~C~vC~~G----G~LlcCD-~C---pr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 62 MDEQCRWCAEG----GNLICCD-FC---HNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp CBCSCSSSCCC----SSEEECS-SS---CCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCeecccCCC----CcEEeCC-CC---CCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 56899999754 3444211 34 36899999996552 358899999964
No 87
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.00 E-value=2.1 Score=34.98 Aligned_cols=49 Identities=22% Similarity=0.435 Sum_probs=30.5
Q ss_pred CCCcceeeccccCCCCCceeccc-CCCCcccccCHHHHHHHH--HhcCCcccccccce
Q 014057 265 EEAVCRICFIELGEGFDALKMEC-GCKGELAFAHRECAVKWF--SIKGNKTCEVCKQE 319 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC-~CkGsLk~VH~~CL~kW~--~~sgs~~CEICk~~ 319 (431)
+...|.||..... .+..+ -| .|. +.+|..||..=+ .-++.+.|+.|...
T Consensus 15 ~~~~C~vC~~~~~-~~~ll--~CD~C~---~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 15 DSYICQVCSRGDE-DDKLL--FCDGCD---DNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCSSSCCSGG-GGGCE--ECTTTC---CEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred CCCCCccCCCcCC-CCCEE--EcCCCC---chhccccCCCCcccCCCCCcCCccCcCc
Confidence 5678999986642 12232 23 344 589999985211 22467889999765
No 88
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=44.41 E-value=4.9 Score=28.81 Aligned_cols=47 Identities=19% Similarity=0.382 Sum_probs=27.7
Q ss_pred CcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHH--hcCCcccccccc
Q 014057 267 AVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQ 318 (431)
Q Consensus 267 ~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~--~sgs~~CEICk~ 318 (431)
+.|.||..... .++.+.-- .|. +.+|..|+..=+. -++...|..|..
T Consensus 1 a~C~vC~~~~~-~~~ll~Cd-~C~---~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 1 ARCKVCRKKGE-DDKLILCD-ECN---KAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCCTTTCCSSC-CSCCEECT-TTC---CEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCC-CCCEEECC-CCC---hhhCcccCCCCcCCCCCCcEECcCccc
Confidence 36889976543 23333211 343 6889999853121 235688998864
No 89
>2kdr_X NS4B, P27, non-structural protein 4B; HCV, 227-254 segment, membranous WEB, replication complex, membrane, transmembrane, RNA-binding; NMR {Hepatitis c virus}
Probab=44.27 E-value=16 Score=24.47 Aligned_cols=23 Identities=17% Similarity=0.125 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHhhhchhhc
Q 014057 390 CILGLLASTTATTMASHAGCHSC 412 (431)
Q Consensus 390 ~vlGll~s~~~~~mv~~~Y~~iy 412 (431)
-|.++|+|++.+.+++|-.-||.
T Consensus 6 ~VtaiLssLTvTsLlr~lh~wi~ 28 (28)
T 2kdr_X 6 RVTAILSSLTVTQLLRRLHQWIS 28 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Confidence 47899999999999998888873
No 90
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=43.84 E-value=24 Score=27.19 Aligned_cols=55 Identities=16% Similarity=0.217 Sum_probs=33.2
Q ss_pred CCCCCCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHH-------hcCCccccccccee
Q 014057 260 EDIPEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS-------IKGNKTCEVCKQEV 320 (431)
Q Consensus 260 Edi~Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~-------~sgs~~CEICk~~y 320 (431)
|..+++...| ||..... +..++.==.|. .|+|..|+.-=.. ......|+.|....
T Consensus 10 ~~~d~~~~~C-~C~~~~~--~~~MI~Cd~C~---~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 10 EVYDPNALYC-ICRQPHN--NRFMICCDRCE---EWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CSCCTTCCCS-TTCCCCC--SSCEEECSSSC---CEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred cccCCCCCEE-ECCCccC--CCCEEEeCCCC---CcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 3334456778 8876542 33444433465 7999999842111 23578999997653
No 91
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=43.15 E-value=5.5 Score=33.70 Aligned_cols=44 Identities=20% Similarity=0.220 Sum_probs=26.0
Q ss_pred CCCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHh--cCCcccc
Q 014057 263 PEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI--KGNKTCE 314 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~--sgs~~CE 314 (431)
++++..|.+|... ++ ..-|..++=-+.+|..||. +.. +|.+.|+
T Consensus 12 ~~~~~~C~~C~~~----G~--ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp 57 (107)
T 4gne_A 12 QMHEDYCFQCGDG----GE--LVMCDKKDCPKAYHLLCLN--LTQPPYGKWECP 57 (107)
T ss_dssp CSSCSSCTTTCCC----SE--EEECCSTTCCCEECTGGGT--CSSCCSSCCCCG
T ss_pred CCCCCCCCcCCCC----Cc--EeEECCCCCCcccccccCc--CCcCCCCCEECC
Confidence 3467889999732 33 3456521223689999997 433 3455555
No 92
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=41.31 E-value=4.7 Score=31.08 Aligned_cols=50 Identities=16% Similarity=0.317 Sum_probs=31.5
Q ss_pred CCCcceeeccccCCCCCceeccc-CCCCcccccCHHHHHHHHHh--cCCccccccccee
Q 014057 265 EEAVCRICFIELGEGFDALKMEC-GCKGELAFAHRECAVKWFSI--KGNKTCEVCKQEV 320 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC-~CkGsLk~VH~~CL~kW~~~--sgs~~CEICk~~y 320 (431)
+...|.||..... ++.++. | .|. .++|..|+.--... .+...|+.|....
T Consensus 17 ~~~~C~~C~~~~~--~~~mi~-CD~C~---~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 17 QIWICPGCNKPDD--GSPMIG-CDDCD---DWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp EEECBTTTTBCCS--SCCEEE-CSSSS---SEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred CCcCCCCCCCCCC--CCCEEE-cCCCC---cccccccCCCCccCCCCCCEEChhccCch
Confidence 4578999976542 333332 3 343 79999998643322 2578899997654
No 93
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=39.39 E-value=19 Score=28.17 Aligned_cols=52 Identities=13% Similarity=0.149 Sum_probs=32.4
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHh---cCCccccccccee
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI---KGNKTCEVCKQEV 320 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~---sgs~~CEICk~~y 320 (431)
++...| ||.....+ +..++.=-.|. .|+|..|+.-=-.. -....|+.|....
T Consensus 10 ~~~~~C-~C~~~~d~-~~~MIqCd~C~---~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 10 LVPVYC-LCRQPYNV-NHFMIECGLCQ---DWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCS-TTSCSCCS-SSCEEEBTTTC---CEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CCccEE-EcCCccCC-CCceEEcCCCC---CcEEeeecCcccccccCCCeEECCCccccc
Confidence 355777 88765432 34444433464 79999998532221 2568999998763
No 94
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=39.02 E-value=4.8 Score=33.19 Aligned_cols=51 Identities=22% Similarity=0.303 Sum_probs=29.6
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHh--cCCc------ccccccce
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI--KGNK------TCEVCKQE 319 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~--sgs~------~CEICk~~ 319 (431)
++++.|.||..... .++.+ -|. +=-+.+|..||...+.. ++.+ .|.+|+..
T Consensus 5 ~~~~~C~~C~~~g~-~~~ll--~C~--~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~C~~C~~~ 63 (111)
T 2ysm_A 5 SSGANCAVCDSPGD-LLDQF--FCT--TCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQS 63 (111)
T ss_dssp CCCSCBTTTCCCCC-TTTSE--ECS--SSCCEECTTTTTCCCCTTTSTTCCCTTTCCCTTTCCC
T ss_pred CCCCCCcCCCCCCC-CcCCe--ECC--CCCCCcChHHhCCccccccccCccCCcCCcccccCcc
Confidence 36789999976642 12222 232 22368999999876542 2333 45566554
No 95
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=38.70 E-value=7.4 Score=32.02 Aligned_cols=49 Identities=18% Similarity=0.430 Sum_probs=31.8
Q ss_pred CCCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHH--hcCCcccccccce
Q 014057 263 PEEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQE 319 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~--~sgs~~CEICk~~ 319 (431)
.+++..|.+|... ++.+. |.+=-+.+|..|+..=+. -.+.+.|..|...
T Consensus 22 d~n~~~C~vC~~~----g~LL~----CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 22 DDSATICRVCQKP----GDLVM----CNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSSCCSSSCSS----SCCEE----CTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCCCcCcCcCCC----CCEEE----CCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 3466899999754 33442 333346889999854332 2467899999864
No 96
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=35.24 E-value=3.1 Score=31.41 Aligned_cols=48 Identities=23% Similarity=0.538 Sum_probs=28.7
Q ss_pred CCCCCcceeeccccCCCCCcee--cccCCCCcccccCHHHHHHHHHh--cCCcccccccc
Q 014057 263 PEEEAVCRICFIELGEGFDALK--MECGCKGELAFAHRECAVKWFSI--KGNKTCEVCKQ 318 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li--~PC~CkGsLk~VH~~CL~kW~~~--sgs~~CEICk~ 318 (431)
+++...| ||..... ++ ++ --|.|. ..++|..|+. +.. .+...|+.|..
T Consensus 7 ~~e~~~C-~C~~~~~--g~-mi~CD~cdC~--~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 7 PNEPTYC-LCHQVSY--GE-MIGCDNPDCS--IEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp --CCEET-TTTEECC--SE-EEECSCTTCS--SCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCCCEE-ECCCcCC--CC-EEEeCCCCCC--CceEehhcCC--CCcCCCCCEECcCccC
Confidence 3456778 8976532 32 32 223464 2589999987 433 26788988864
No 97
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=34.74 E-value=12 Score=27.90 Aligned_cols=53 Identities=23% Similarity=0.445 Sum_probs=32.9
Q ss_pred CCCCCcceeeccccCCCCCceeccc-CCCCcccccCHHHHHHHHH-----hcCCcccccccce
Q 014057 263 PEEEAVCRICFIELGEGFDALKMEC-GCKGELAFAHRECAVKWFS-----IKGNKTCEVCKQE 319 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li~PC-~CkGsLk~VH~~CL~kW~~-----~sgs~~CEICk~~ 319 (431)
++++..|.+|.....+.++.++ -| .|. +.+|+.|+.-=+. -.+.+.|..|...
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll-~Cd~C~---~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMV-ICDKCG---QGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEE-ECSSSC---CEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCEE-ECCCCC---hHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 3467899999866432223332 22 343 5789999874321 3577889988654
No 98
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=33.07 E-value=35 Score=28.35 Aligned_cols=34 Identities=18% Similarity=0.533 Sum_probs=24.1
Q ss_pred CCCCcceeeccccCCCCCceecccC-CCCcccccCHHHHHHH
Q 014057 264 EEEAVCRICFIELGEGFDALKMECG-CKGELAFAHRECAVKW 304 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~-CkGsLk~VH~~CL~kW 304 (431)
..+..|-||-.-.. ....||+ |. +.+|-.||.+-
T Consensus 13 ~~D~~C~VC~~~t~----~~l~pCRvC~---RvfH~~CL~r~ 47 (89)
T 1wil_A 13 VNDEMCDVCEVWTA----ESLFPCRVCT---RVFHDGCLRRM 47 (89)
T ss_dssp CCSCCCTTTCCCCS----SCCSSCSSSS---SCCCHHHHHHH
T ss_pred CCCcccCccccccc----cceecccccc---ccccHhhcccc
Confidence 35689999964321 2257887 54 78999999885
No 99
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=32.75 E-value=20 Score=29.76 Aligned_cols=36 Identities=17% Similarity=0.321 Sum_probs=21.2
Q ss_pred CCCcceeeccccCC----CCCceecccCCCCcccccCHHHHHH
Q 014057 265 EEAVCRICFIELGE----GFDALKMECGCKGELAFAHRECAVK 303 (431)
Q Consensus 265 ee~vCRICl~e~~e----~~~~Li~PC~CkGsLk~VH~~CL~k 303 (431)
...+|.+|+..... .++.|+.==.|. +.+|..||..
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~---~~~H~~Cl~~ 43 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCG---NSGHPSCLKF 43 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTC---CEECHHHHTC
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcC---CCCCCchhcC
Confidence 35789999865421 122333222243 5789999963
No 100
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=32.43 E-value=10 Score=31.71 Aligned_cols=50 Identities=16% Similarity=0.298 Sum_probs=28.0
Q ss_pred CcceeeccccCC-----CCCceecccCCCCcccccCHHHHHHHHH-----hcCCc------ccccccce
Q 014057 267 AVCRICFIELGE-----GFDALKMECGCKGELAFAHRECAVKWFS-----IKGNK------TCEVCKQE 319 (431)
Q Consensus 267 ~vCRICl~e~~e-----~~~~Li~PC~CkGsLk~VH~~CL~kW~~-----~sgs~------~CEICk~~ 319 (431)
+.|.||+.+..+ ..+.|+.==.|. +.+|..||..+.. .++.+ .|.+|+..
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~---~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~C~~C~~~ 67 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCG---RSGHPTCLQFTLNMTEAVKTYKWQCIECKSCILCGTS 67 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSC---CEECTTTTTCCHHHHHHHHHTTCCCGGGCCCTTTTCC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCC---CccchhhCCChhhhhhccCCCccCccccCccCccccc
Confidence 579999865421 122333222343 5789999986632 23444 46666653
No 101
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=31.28 E-value=4 Score=33.66 Aligned_cols=49 Identities=24% Similarity=0.384 Sum_probs=30.1
Q ss_pred CCCCcceeeccccCCCCCcee--cccCCCCcccccCHHHHHHHHHhcCCccccc-ccc
Q 014057 264 EEEAVCRICFIELGEGFDALK--MECGCKGELAFAHRECAVKWFSIKGNKTCEV-CKQ 318 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li--~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEI-Ck~ 318 (431)
++...| ||..... ++ ++ .-|.|. ..|+|..|+--=-.-.+.+.|+. |..
T Consensus 24 ~~~~yC-iC~~~~~--g~-MI~CD~c~C~--~eWfH~~CVgl~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 24 QEEVYC-FCRNVSY--GP-MVACDNPACP--FEWFHYGCVGLKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp CCSCCS-TTTCCCS--SS-EECCCSSSCS--CSCEETTTSSCSSCTTSCCCSSHHHHH
T ss_pred CCCcEE-EeCCCCC--CC-EEEecCCCCc--cccCcCccCCCCcCCCCCccCChhhcc
Confidence 356788 9976432 33 33 335565 36999999851111136789999 974
No 102
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=31.21 E-value=56 Score=27.62 Aligned_cols=45 Identities=22% Similarity=0.623 Sum_probs=30.9
Q ss_pred CCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHhcCCcccccccceee
Q 014057 266 EAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVE 321 (431)
Q Consensus 266 e~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~ 321 (431)
...|+.|+-+. . .|+. |.. +|.=..||..-+.. +..|+||++...
T Consensus 28 ~~nCKsCWf~~---k-~LV~---C~d--HYLCl~CLtlmL~~--SdrCpIC~~pLP 72 (99)
T 2ko5_A 28 PQFCKSCWFEN---K-GLVE---CNN--HYLCLNCLTLLLSV--SNRCPICKMPLP 72 (99)
T ss_dssp CCCCCSSCSCC---S-SEEE---CSS--CEEEHHHHHHTCSS--SSEETTTTEECC
T ss_pred cccChhhcccc---C-Ceee---ecc--hhhHHHHHHHHHhh--ccCCcccCCcCC
Confidence 37799997653 2 3332 322 67777888877654 789999999954
No 103
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=28.28 E-value=12 Score=30.65 Aligned_cols=48 Identities=21% Similarity=0.339 Sum_probs=27.5
Q ss_pred CCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHH-HhcCCcccccccce
Q 014057 266 EAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWF-SIKGNKTCEVCKQE 319 (431)
Q Consensus 266 e~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~-~~sgs~~CEICk~~ 319 (431)
...| ||..... ++.++.==.|. .++|..|+.-=. .......|+.|+.+
T Consensus 28 ~vrC-iC~~~~~--~~~mi~Cd~C~---~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 28 VTRC-ICGFTHD--DGYMICCDKCS---VWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp BCCC-TTSCCSC--SSCEEEBTTTC---BEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred CEEe-ECCCccC--CCcEEEcCCCC---CcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 3456 7754432 33444433454 699999974211 11235899999754
No 104
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.99 E-value=4.8 Score=29.66 Aligned_cols=46 Identities=24% Similarity=0.476 Sum_probs=28.1
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHH--hcCCcccccccc
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQ 318 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~--~sgs~~CEICk~ 318 (431)
++..|.+|... ++.+.-- .|. +.+|..|+..=+. -++.+.|..|..
T Consensus 8 ~~~~C~vC~~~----g~ll~Cd-~C~---~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS----GQLLMCD-TCS---RVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS----SCCEECS-SSS---CEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC----CeEEEcC-CCC---cceECccCCCCcCCCCCCceEChhhhC
Confidence 56889999754 3343211 343 6899999874322 235677887753
No 105
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=25.43 E-value=11 Score=39.36 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=31.6
Q ss_pred CCCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHHh---cCCcccccccce
Q 014057 264 EEEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFSI---KGNKTCEVCKQE 319 (431)
Q Consensus 264 Eee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~~---sgs~~CEICk~~ 319 (431)
.+...| ||..... .+..++.-..|. .|.|..|+.-=-.. -+...|+.|...
T Consensus 35 ~~~~yC-~C~~~~d-~~~~MIqCd~C~---~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 35 PPPVYC-VCRQPYD-VNRFMIECDICK---DWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp CCCEET-TTTEECC-TTSCEEEBTTTC---CEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CCCeEE-eCCCcCC-CCCCeEEccCCC---CceeeeecCcCcccccCCCEEECCCCcCC
Confidence 345666 7865542 244566655676 69999998422111 135899999865
No 106
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=24.81 E-value=45 Score=28.25 Aligned_cols=35 Identities=23% Similarity=0.521 Sum_probs=28.1
Q ss_pred ecccCCCCcccccCHHHHHHHHHhcCCcccccccceeeecc
Q 014057 284 KMECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEVENLP 324 (431)
Q Consensus 284 i~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y~n~p 324 (431)
..||. +.+=++|+..|-+. +.++|+.|+..+..+-
T Consensus 17 mIPCk-----HvFCydCa~~~~~~-~~k~Cp~C~~~V~rVe 51 (101)
T 3vk6_A 17 MIPCK-----HVFCYDCAILHEKK-GDKMCPGCSDPVQRIE 51 (101)
T ss_dssp EETTC-----CEEEHHHHHHHHHT-TCCBCTTTCCBCSEEE
T ss_pred ecccc-----ccHHHHHHHHHHhc-cCCCCcCcCCeeeeeE
Confidence 57887 46778999999864 5678999999988773
No 107
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=22.92 E-value=21 Score=29.62 Aligned_cols=49 Identities=20% Similarity=0.440 Sum_probs=32.2
Q ss_pred CcceeeccccCCCCCceeccc-CCCCcccccCHHHHHH----HHH----hcCCcccccccce
Q 014057 267 AVCRICFIELGEGFDALKMEC-GCKGELAFAHRECAVK----WFS----IKGNKTCEVCKQE 319 (431)
Q Consensus 267 ~vCRICl~e~~e~~~~Li~PC-~CkGsLk~VH~~CL~k----W~~----~sgs~~CEICk~~ 319 (431)
..|.||.....+ +..++.-| .|+ .|+|..|+-- .-. ......|+.|...
T Consensus 4 ~~C~iC~~p~~~-~~~mi~Cdd~C~---~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~ 61 (105)
T 2xb1_A 4 YPCGACRSEVND-DQDAILCEASCQ---KWFHRECTGMTESAYGLLTTEASAVWACDLCLKT 61 (105)
T ss_dssp CBCTTTCSBCCT-TSCEEECTTTTC---CEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHT
T ss_pred CCCCCCCCccCC-CCCEEEecCCcc---cccccccCCcCHHHHHhhccCCCCCEECccccCc
Confidence 579999877543 33455555 786 6999999731 101 1156889999875
No 108
>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}
Probab=22.19 E-value=29 Score=26.68 Aligned_cols=16 Identities=38% Similarity=0.877 Sum_probs=12.9
Q ss_pred cCCcccccccceeeec
Q 014057 308 KGNKTCEVCKQEVENL 323 (431)
Q Consensus 308 sgs~~CEICk~~y~n~ 323 (431)
.|+..||+|+++-...
T Consensus 1 ~GsmvC~~C~~ECET~ 16 (57)
T 2k9h_A 1 MGSMVCDVCHHECETA 16 (57)
T ss_dssp CCTTBCTTTCCBCSST
T ss_pred CCcchhhHHHhhhhhH
Confidence 3788999999997654
No 109
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.75 E-value=15 Score=28.55 Aligned_cols=52 Identities=19% Similarity=0.311 Sum_probs=30.3
Q ss_pred CCCCCcceeeccccCCCCCcee--cccCCCCcccccCHHHHHHHHHhcCCccccccccee
Q 014057 263 PEEEAVCRICFIELGEGFDALK--MECGCKGELAFAHRECAVKWFSIKGNKTCEVCKQEV 320 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li--~PC~CkGsLk~VH~~CL~kW~~~sgs~~CEICk~~y 320 (431)
+++...| ||.... .+ .++ .-|.|. ..|+|..|+.-=-.-.+...|+.|....
T Consensus 3 ~~~~~yC-~C~~~~--~g-~MI~CD~cdC~--~~WfH~~Cvgl~~~p~~~w~Cp~C~~~~ 56 (70)
T 1x4i_A 3 SGSSGYC-ICNQVS--YG-EMVGCDNQDCP--IEWFHYGCVGLTEAPKGKWYCPQCTAAM 56 (70)
T ss_dssp CSCCCCS-TTSCCC--CS-SEECCSCTTCS--CCCEEHHHHTCSSCCSSCCCCHHHHHHH
T ss_pred CCCCeEE-EcCCCC--CC-CEeEeCCCCCC--ccCCcccccccCcCCCCCEECCCCCccc
Confidence 3456777 476543 23 333 234464 3699999986211123568899997653
No 110
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=21.47 E-value=7.6 Score=28.86 Aligned_cols=47 Identities=23% Similarity=0.429 Sum_probs=29.6
Q ss_pred CCCcceeeccccCCCCCceecccCCCCcccccCHHHHHHHHH--hcCCcccccccce
Q 014057 265 EEAVCRICFIELGEGFDALKMECGCKGELAFAHRECAVKWFS--IKGNKTCEVCKQE 319 (431)
Q Consensus 265 ee~vCRICl~e~~e~~~~Li~PC~CkGsLk~VH~~CL~kW~~--~sgs~~CEICk~~ 319 (431)
++..|.+|... ++.+. |. +=-+.+|..|+..=+. -++.+.|..|...
T Consensus 4 ~~~~C~vC~~~----g~ll~--Cd--~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 4 HEDFCSVCRKS----GQLLM--CD--TCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCSSCTTTCCC----SSCEE--CS--SSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCcCCCCC----CcEEE--cC--CCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 56889999753 33332 22 2236899999874322 2367889988654
No 111
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=20.63 E-value=38 Score=25.93 Aligned_cols=34 Identities=26% Similarity=0.615 Sum_probs=21.0
Q ss_pred CCCCCcceeeccccCCCCCceeccc--CCCCcccccCHHHH
Q 014057 263 PEEEAVCRICFIELGEGFDALKMEC--GCKGELAFAHRECA 301 (431)
Q Consensus 263 ~Eee~vCRICl~e~~e~~~~Li~PC--~CkGsLk~VH~~CL 301 (431)
.+....|-+|.....+ + ....-| .|+ .|+|..|+
T Consensus 5 ~~~~~~C~~C~~p~~~-~-~~mI~CD~~C~---~WfH~~Cv 40 (65)
T 2vpb_A 5 SDPVYPCGICTNEVND-D-QDAILCEASCQ---KWFHRICT 40 (65)
T ss_dssp ----CBCTTTCSBCCT-T-SCEEEBTTTTC---CEEEHHHH
T ss_pred CCCcCcCccCCCccCC-C-CCeEecccCcc---ccCchhcc
Confidence 3456789999887543 2 233455 365 69999996
Done!