Query 014058
Match_columns 431
No_of_seqs 259 out of 1513
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 01:27:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014058.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014058hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 1E-93 2.3E-98 718.0 28.8 381 37-421 32-415 (571)
2 COG1621 SacC Beta-fructosidase 100.0 4.9E-86 1.1E-90 679.1 35.1 319 50-397 24-356 (486)
3 TIGR01322 scrB_fam sucrose-6-p 100.0 2.8E-78 6.1E-83 629.5 37.1 306 50-389 9-335 (445)
4 smart00640 Glyco_32 Glycosyl h 100.0 9E-77 2E-81 616.7 38.8 308 59-387 1-321 (437)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 7.8E-78 1.7E-82 598.4 27.0 299 59-377 1-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 5.1E-69 1.1E-73 531.5 33.5 286 65-380 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 1.9E-56 4E-61 438.3 30.0 266 68-370 1-278 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 1.1E-39 2.3E-44 316.9 26.9 243 69-343 8-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 1.6E-36 3.4E-41 294.9 27.3 269 68-365 1-286 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.9 6.9E-26 1.5E-30 226.8 24.4 194 68-280 8-255 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 3.5E-23 7.6E-28 204.0 20.8 190 58-256 4-282 (291)
12 cd08984 GH43_5 Glycosyl hydrol 99.8 1.2E-19 2.6E-24 179.5 21.0 162 67-256 79-246 (294)
13 cd09004 GH43_bXyl Glycosyl hyd 99.8 1.1E-19 2.5E-24 177.6 20.3 191 64-291 5-197 (275)
14 cd08993 GH43_DUF377 Glycosyl h 99.8 1.8E-19 3.9E-24 175.7 18.8 147 69-236 2-156 (268)
15 cd08999 GH43_ABN_2 Glycosyl hy 99.8 1E-17 2.2E-22 164.3 21.9 196 65-292 6-212 (287)
16 cd08990 GH43_AXH_like Glycosyl 99.7 1.5E-16 3.2E-21 155.6 20.7 195 69-291 2-206 (274)
17 cd08978 GH_F Glycosyl hydrolas 99.7 1.3E-15 2.7E-20 147.3 20.6 191 69-292 2-202 (271)
18 cd08991 GH43_bXyl_2 Glycosyl h 99.7 7E-15 1.5E-19 145.0 20.9 180 69-282 2-204 (294)
19 cd08992 GH43_like_1 Glycosyl h 99.6 7.2E-15 1.6E-19 147.5 18.8 177 54-239 23-247 (349)
20 cd08984 GH43_5 Glycosyl hydrol 99.6 4.1E-14 9E-19 140.0 19.5 170 67-256 11-193 (294)
21 cd08998 GH43_ABN_1 Glycosyl hy 99.6 7.1E-14 1.5E-18 137.7 20.2 190 67-293 1-207 (288)
22 cd08985 GH43_6 Glycosyl hydrol 99.5 1.2E-12 2.5E-17 127.9 21.4 189 69-292 5-203 (265)
23 cd09000 GH43_XYL_1 Glycosyl hy 99.4 6.2E-12 1.4E-16 123.9 19.7 178 65-281 6-196 (288)
24 PF04616 Glyco_hydro_43: Glyco 99.4 1.6E-11 3.4E-16 120.1 21.0 183 65-282 8-200 (286)
25 cd08983 GH43_4 Glycosyl hydrol 99.4 3.7E-11 7.9E-16 118.1 23.3 183 64-280 15-206 (276)
26 PF04041 DUF377: Domain of unk 99.4 1.8E-12 4E-17 129.3 13.0 197 72-295 36-241 (312)
27 cd09003 GH43_AXH_1 Glycosyl hy 99.4 2.2E-11 4.7E-16 121.7 20.5 186 65-281 7-215 (311)
28 cd08979 GH_J Glycosyl hydrolas 99.3 3.2E-11 6.9E-16 117.0 15.8 137 65-213 64-209 (276)
29 cd08988 GH43_ABN Glycosyl hydr 99.3 1.4E-10 3E-15 114.1 20.5 180 68-281 1-193 (279)
30 cd08981 GH43_2 Glycosyl hydrol 99.3 3E-10 6.5E-15 112.5 20.5 134 65-212 4-142 (291)
31 cd08992 GH43_like_1 Glycosyl h 99.3 3.3E-10 7.2E-15 114.0 19.0 172 67-256 112-310 (349)
32 cd08989 GH43_XYL Glycosyl hydr 99.2 1.8E-09 4E-14 105.6 19.4 173 65-281 6-189 (269)
33 cd09001 GH43_XYL_2 Glycosyl hy 99.2 1.3E-09 2.8E-14 106.6 17.6 169 65-281 9-191 (269)
34 cd08986 GH43_7 Glycosyl hydrol 99.1 2.2E-09 4.7E-14 105.1 17.9 179 66-281 1-202 (269)
35 cd08993 GH43_DUF377 Glycosyl h 99.1 1.3E-09 2.8E-14 106.4 15.2 98 131-237 3-104 (268)
36 cd08980 GH43_1 Glycosyl hydrol 99.1 6.4E-09 1.4E-13 102.5 20.0 188 69-292 2-205 (288)
37 cd09002 GH43_XYL_3 Glycosyl hy 99.0 9.6E-09 2.1E-13 101.2 17.7 120 67-212 15-134 (280)
38 cd08987 GH62 Glycosyl hydrolas 99.0 3.4E-08 7.3E-13 96.3 17.9 203 60-303 14-230 (303)
39 cd08982 GH43_3 Glycosyl hydrol 98.9 8.3E-08 1.8E-12 95.3 18.1 171 68-293 4-192 (295)
40 COG2152 Predicted glycosylase 98.9 4.3E-08 9.4E-13 95.4 15.4 146 72-238 35-192 (314)
41 PF02435 Glyco_hydro_68: Levan 98.9 1E-07 2.2E-12 97.4 18.8 193 69-280 64-318 (428)
42 cd08995 GH32_Aec43_like Glycos 98.7 4.8E-07 1E-11 88.7 16.4 132 68-214 63-201 (280)
43 cd08994 GH43_like_2 Glycosyl h 98.7 1.3E-07 2.9E-12 93.2 12.2 108 68-181 81-198 (291)
44 cd08999 GH43_ABN_2 Glycosyl hy 98.7 1.2E-06 2.6E-11 85.8 17.5 155 67-236 62-227 (287)
45 cd08991 GH43_bXyl_2 Glycosyl h 98.6 4.4E-06 9.6E-11 82.4 20.9 155 65-234 53-227 (294)
46 cd08983 GH43_4 Glycosyl hydrol 98.6 4.9E-07 1.1E-11 88.9 13.9 89 177-281 5-99 (276)
47 cd08990 GH43_AXH_like Glycosyl 98.6 3.6E-06 7.8E-11 82.3 19.7 153 64-238 61-220 (274)
48 cd08978 GH_F Glycosyl hydrolas 98.6 1.8E-06 3.8E-11 83.4 16.8 156 64-234 56-215 (271)
49 PF04041 DUF377: Domain of unk 98.6 6.4E-07 1.4E-11 89.6 14.1 104 125-237 29-135 (312)
50 cd08772 GH43_62_32_68 Glycosyl 98.5 5.2E-06 1.1E-10 80.4 16.4 157 65-234 58-224 (286)
51 cd08986 GH43_7 Glycosyl hydrol 98.5 2.1E-06 4.7E-11 84.0 12.8 74 192-281 2-98 (269)
52 cd08981 GH43_2 Glycosyl hydrol 98.3 7.4E-06 1.6E-10 81.2 13.6 77 190-281 4-87 (291)
53 cd09002 GH43_XYL_3 Glycosyl hy 98.3 1.6E-05 3.4E-10 78.3 14.0 78 177-281 7-84 (280)
54 cd08998 GH43_ABN_1 Glycosyl hy 98.3 4.1E-05 8.8E-10 75.4 17.0 154 64-232 55-217 (288)
55 cd08996 GH32_B_Fructosidase Gl 98.3 1.3E-05 2.8E-10 79.2 13.1 129 73-214 68-202 (298)
56 cd08989 GH43_XYL Glycosyl hydr 98.1 1.8E-05 3.8E-10 77.5 10.4 78 178-281 1-87 (269)
57 TIGR01322 scrB_fam sucrose-6-p 98.1 5.8E-05 1.3E-09 79.2 13.9 131 73-213 91-225 (445)
58 cd09004 GH43_bXyl Glycosyl hyd 98.0 0.00033 7.1E-09 68.5 18.1 142 67-236 66-213 (275)
59 COG2152 Predicted glycosylase 98.0 8.7E-05 1.9E-09 72.7 12.1 103 127-238 30-139 (314)
60 cd08985 GH43_6 Glycosyl hydrol 98.0 0.00083 1.8E-08 65.6 18.8 145 66-236 64-214 (265)
61 cd08997 GH68 Glycosyl hydrolas 97.9 0.00038 8.2E-09 70.6 15.5 149 76-233 80-284 (349)
62 cd08988 GH43_ABN Glycosyl hydr 97.8 0.0008 1.7E-08 66.2 16.3 151 66-233 56-219 (279)
63 COG3507 XynB Beta-xylosidase [ 97.8 0.00028 6.1E-09 74.2 13.2 166 68-256 31-215 (549)
64 cd09003 GH43_AXH_1 Glycosyl hy 97.7 0.0028 6.1E-08 63.4 18.7 148 68-238 79-248 (311)
65 PF04616 Glyco_hydro_43: Glyco 97.7 0.00058 1.3E-08 66.6 13.5 155 52-214 104-261 (286)
66 smart00640 Glyco_32 Glycosyl h 97.7 0.00033 7.1E-09 73.4 11.8 132 73-213 74-215 (437)
67 cd09001 GH43_XYL_2 Glycosyl hy 97.7 0.0017 3.7E-08 63.5 15.6 134 67-233 76-212 (269)
68 PF03664 Glyco_hydro_62: Glyco 97.6 0.0043 9.3E-08 59.1 17.1 185 61-283 17-209 (271)
69 cd08980 GH43_1 Glycosyl hydrol 97.6 0.0059 1.3E-07 60.1 18.0 130 67-214 55-195 (288)
70 PF13088 BNR_2: BNR repeat-lik 97.5 0.0019 4.1E-08 62.6 12.9 149 66-234 47-199 (275)
71 cd09000 GH43_XYL_1 Glycosyl hy 97.3 0.012 2.6E-07 58.0 17.0 146 64-234 65-219 (288)
72 cd00260 Sialidase Sialidases o 97.3 0.021 4.6E-07 57.5 18.3 166 51-234 57-238 (351)
73 cd08987 GH62 Glycosyl hydrolas 96.9 0.034 7.3E-07 54.8 14.6 144 67-234 78-230 (303)
74 PF00251 Glyco_hydro_32N: Glyc 96.8 0.034 7.4E-07 55.5 14.9 115 133-256 14-138 (308)
75 PF13088 BNR_2: BNR repeat-lik 96.7 0.067 1.4E-06 51.7 15.9 161 78-256 1-168 (275)
76 cd08982 GH43_3 Glycosyl hydrol 96.5 0.039 8.4E-07 54.9 13.0 80 127-212 159-239 (295)
77 cd00260 Sialidase Sialidases o 95.5 2.9 6.2E-05 42.0 21.0 147 96-256 45-207 (351)
78 PF13859 BNR_3: BNR repeat-lik 94.6 0.65 1.4E-05 46.6 13.2 145 69-235 62-213 (310)
79 COG3507 XynB Beta-xylosidase [ 92.7 2.3 5.1E-05 45.4 13.6 150 62-229 86-243 (549)
80 PF02435 Glyco_hydro_68: Levan 90.3 11 0.00023 39.5 15.2 129 77-214 143-320 (428)
81 PF13810 DUF4185: Domain of un 87.4 18 0.00038 36.4 14.4 157 65-234 92-272 (316)
82 COG1621 SacC Beta-fructosidase 84.6 15 0.00033 39.2 12.7 98 135-240 48-153 (486)
83 PTZ00334 trans-sialidase; Prov 83.8 11 0.00023 42.5 11.5 124 93-235 215-350 (780)
84 PF03664 Glyco_hydro_62: Glyco 81.7 53 0.0011 31.9 13.8 142 69-234 78-229 (271)
85 KOG0228 Beta-fructofuranosidas 76.1 20 0.00044 38.2 9.9 90 137-235 68-167 (571)
86 COG3940 Predicted beta-xylosid 75.6 76 0.0016 30.2 14.7 160 62-238 65-245 (324)
87 PF13810 DUF4185: Domain of un 68.8 26 0.00057 35.2 8.7 92 137-234 103-209 (316)
88 PF07172 GRP: Glycine rich pro 45.5 16 0.00035 30.1 2.2 13 9-21 1-13 (95)
89 PF02012 BNR: BNR/Asp-box repe 26.7 52 0.0011 16.8 1.4 11 160-174 2-12 (12)
90 smart00815 AMA-1 Apical membra 23.9 85 0.0019 30.2 3.4 61 189-256 120-197 (240)
91 PTZ00449 104 kDa microneme/rho 22.3 2.7E+02 0.0059 30.2 7.0 53 77-148 57-109 (943)
92 smart00602 VPS10 VPS10 domain. 21.6 8.8E+02 0.019 26.7 11.3 30 349-378 382-411 (612)
93 PF15240 Pro-rich: Proline-ric 20.1 67 0.0015 29.6 1.8 19 14-32 1-19 (179)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-93 Score=718.00 Aligned_cols=381 Identities=56% Similarity=0.986 Sum_probs=355.2
Q ss_pred ccccccccccCCCCCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccc
Q 014058 37 TNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHA 116 (431)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~a 116 (431)
..+++.+++++...+.++||.|||+|++|||||| +|++|.|||||||||.++.|| +.+||||+|+||+||+.+|+|
T Consensus 32 ~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg-~ivWGHavSkDLinW~~lp~A 107 (571)
T KOG0228|consen 32 NYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWG-NIVWGHAVSKDLINWEALPPA 107 (571)
T ss_pred hhhhhcccCccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceee-eeEeeeecchhhccccccCcc
Confidence 3344544444567889999999999999999999 799999999999999999999 899999999999999999999
Q ss_pred cCCCCccCCCCeEeecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC--CCCCCCCccC
Q 014058 117 LCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--NGVKDDMFRD 194 (431)
Q Consensus 117 L~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p--~~~~~~~~RD 194 (431)
|.|++++|.+|||||||+++++|+++++|||.+...+|+|.+|+..|.+|+.|+.|.|.++||++.++ .+++...|||
T Consensus 108 i~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRD 187 (571)
T KOG0228|consen 108 IAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRD 187 (571)
T ss_pred cCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccC
Confidence 99999999999999999999999999999999888899999999999999999999999999999877 6778899999
Q ss_pred CeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeee
Q 014058 195 PTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKH 274 (431)
Q Consensus 195 P~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~ 274 (431)
|+++|.+++|+|+|++|+..+++|.+.+|+|+|+++|+..+.|+++...++||||||||++..+|.++++.+..+...|+
T Consensus 188 PttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkh 267 (571)
T KOG0228|consen 188 PTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKH 267 (571)
T ss_pred CceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEecccccc
Confidence 99999999999999999988888999999999999999998899988899999999999999999999987766555699
Q ss_pred EEEEeeCCCCeeeEEEeeecCCCCeeecCCCCCCCCCceecccCCCcccceeecCCCCeEEEEEeccCCCCCCCCCCCCc
Q 014058 275 VLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGW 354 (431)
Q Consensus 275 vl~~s~~~~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW 354 (431)
|++.|+.+++.++|+||+||+++.+|+|+..+.+.....+.|||+|||+|||.|..++|||+|||++|+++..+..++||
T Consensus 268 vlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw 347 (571)
T KOG0228|consen 268 VLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGW 347 (571)
T ss_pred ccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhccc
Confidence 99999988899999999999988999999887776566789999999999999998999999999999999999999999
Q ss_pred cccccccEEEEEec-CCCeEEecchHHHHhhhccceeccceeeCCCceEEecccccceEEEEEEEEEe
Q 014058 355 SGVQTVPRAIWLDK-SGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVNSFHCILLY 421 (431)
Q Consensus 355 ~g~lslPR~L~l~~-~G~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 421 (431)
+|.||+||+++|+. .|++|.|.|++|++.||...+...+..+++|...++.++++.|+|+|++|.+.
T Consensus 348 ~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~ 415 (571)
T KOG0228|consen 348 RGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVE 415 (571)
T ss_pred ccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEec
Confidence 99999999999998 78899999999999999999988888899999999999999999999999987
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-86 Score=679.08 Aligned_cols=319 Identities=39% Similarity=0.734 Sum_probs=277.4
Q ss_pred CCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeE
Q 014058 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~ 129 (431)
..++|||.|||+||.||||||||++|++|+|||||||+|+++.|| ++|||||+|+|||||+++|+||.|+..+|.+|||
T Consensus 24 ~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~y 102 (486)
T COG1621 24 AKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHG-PKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCY 102 (486)
T ss_pred cCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCC-CceeeeeccCCcccceECCceecCCCccccCCce
Confidence 558999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred eecEEEccCCeEEEEEeeccC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCe
Q 014058 130 SGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~ 205 (431)
|||||++ +|...+||||+.+ .+.+.||+|+|+|+ .+|+|+.+|||+..|+++ +.|||||||+|+ ++++
T Consensus 103 SGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~~ 174 (486)
T COG1621 103 SGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGGK 174 (486)
T ss_pred eeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCCc
Confidence 9999985 9999999999865 37789999999996 588997678999888876 889999998888 6889
Q ss_pred EEEEEeeee-CCcceEEEEEeCCCCCcEEccccccc-CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC-
Q 014058 206 WRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS- 282 (431)
Q Consensus 206 ~~M~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~-~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~- 282 (431)
|||++||+. +..|+|+||+|+||++|++.|++..+ +..++||||||||+|+ +...+ .+|++..+.++
T Consensus 175 ~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~--~~~~~--------~~~pqg~~~~~~ 244 (486)
T COG1621 175 WWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELD--GEDVL--------LFWPQGLSINGG 244 (486)
T ss_pred EEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEec--CcCce--------EEcceeeecCCC
Confidence 999999987 56789999999999999999986655 4456799999999999 43333 35565555432
Q ss_pred ----CCeeeEEEeeecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCC--CCCCCCCcc
Q 014058 283 ----DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDST--QDDIDKGWS 355 (431)
Q Consensus 283 ----~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~--~~~~~~gW~ 355 (431)
...+.|++|+||++ +|.+... .+++||+|+ |||+|||.++ ++|||++|||++|++. .++...+|+
T Consensus 245 ~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~ 316 (486)
T COG1621 245 EYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWR 316 (486)
T ss_pred cCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcC
Confidence 45689999999997 6665542 367999999 9999999985 7999999999999986 566678999
Q ss_pred ccccccEEEEEecCCCeEEecchHHHHhhhccceeccceeeC
Q 014058 356 GVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELG 397 (431)
Q Consensus 356 g~lslPR~L~l~~~G~~L~q~Pv~el~~Lr~~~~~~~~~~l~ 397 (431)
|||||||||+|. +| +|+|+|++||++||+.+..+.+..++
T Consensus 317 ~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~ 356 (486)
T COG1621 317 GAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLS 356 (486)
T ss_pred ccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccc
Confidence 999999999995 66 79999999999999986655555444
No 3
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=2.8e-78 Score=629.45 Aligned_cols=306 Identities=34% Similarity=0.659 Sum_probs=264.1
Q ss_pred CCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeE
Q 014058 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~ 129 (431)
.+++|||+|||+|+.||||||||++|++|+||||||++|.++.|| +++||||+|+||+||+++|+||.|++.+|..|||
T Consensus 9 ~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~ 87 (445)
T TIGR01322 9 LQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHG-LKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCY 87 (445)
T ss_pred ccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccC-ceEEEEEECCCccccEECCccCcCCCcccCCceE
Confidence 457899999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred eecEEEccCCeEEEEEeeccC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCe
Q 014058 130 SGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~ 205 (431)
||||++ ++|+++|||||+.. .+.+.|++|+|+|+ .+|+|.+ +|||.+++.....+||||+| |+ .+|+
T Consensus 88 sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~ 158 (445)
T TIGR01322 88 SGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGH 158 (445)
T ss_pred ECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCE
Confidence 999987 59999999999753 24678999999985 5899974 59997644434678999996 44 3689
Q ss_pred EEEEEeeee-CCcceEEEEEeCCCCCcEEcccccccC-----CCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEe
Q 014058 206 WRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYSV-----QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTS 279 (431)
Q Consensus 206 ~~M~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~-----~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s 279 (431)
|||++|++. +..|++++|+|+||++|++.+.+.... ..+.|||||+||+|+ | ||||++|
T Consensus 159 ~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~~s 223 (445)
T TIGR01322 159 WYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLLFS 223 (445)
T ss_pred EEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEEEe
Confidence 999999876 456899999999999999998654332 235699999999997 5 7888887
Q ss_pred eCCC----------CeeeEEEeeecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCC
Q 014058 280 LFSD----------KHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQD 348 (431)
Q Consensus 280 ~~~~----------~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~ 348 (431)
.... ..++|++|+||.++.+|+|++. .+.+|+|+ |||+|+|.++ ++|||+||||++|+...+
T Consensus 224 ~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~ 296 (445)
T TIGR01322 224 PQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYP 296 (445)
T ss_pred ccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCC
Confidence 6431 2467999999987789988753 46899998 9999999885 699999999999987666
Q ss_pred CCCCCccccccccEEEEEecCCCeEEecchHHHHhhhccce
Q 014058 349 DIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV 389 (431)
Q Consensus 349 ~~~~gW~g~lslPR~L~l~~~G~~L~q~Pv~el~~Lr~~~~ 389 (431)
+.+.+|+|+|||||+|+|+ +| +|+|+|++||++||++..
T Consensus 297 ~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~ 335 (445)
T TIGR01322 297 TDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEH 335 (445)
T ss_pred CccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCcc
Confidence 6778999999999999996 67 799999999999998754
No 4
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=9e-77 Score=616.67 Aligned_cols=308 Identities=47% Similarity=0.898 Sum_probs=257.4
Q ss_pred eeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccC
Q 014058 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (431)
Q Consensus 59 H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~d 138 (431)
||+|+.||||||||++|++|+||||||++|.++.|| +++||||+|+||+||+++++||.|+..+|..|||||||+++ +
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~ 78 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWG-NIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-P 78 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCC-CeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-C
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999885 7
Q ss_pred CeEEEEEeeccCC------CceeE-EEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEe
Q 014058 139 DKPFILYTGIDAS------GQQVQ-NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (431)
Q Consensus 139 g~~~l~YTg~~~~------~~~~q-~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~g 211 (431)
|++++||||+... ..+.| +.|.|+|+ ++|+|+++|||+.++++....+||||+|+|+ ++|+|||++|
T Consensus 79 ~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g 152 (437)
T smart00640 79 GNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLG-----GTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIG 152 (437)
T ss_pred CceEEEEcCCcccccccCcccEEEEEEEECCCC-----CeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEE
Confidence 7799999997421 22334 44444443 7999987799997665556789999998776 3479999999
Q ss_pred eee-CCcceEEEEEeCCCCCcEEccccccc--CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeE
Q 014058 212 GQI-DNEGMAFVYWSWDFIHWTKLDHPLYS--VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYY 288 (431)
Q Consensus 212 a~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~--~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y 288 (431)
++. +..|+|++|+|+||++|++.+.++.. ...+.||||||||+|+.+| .+.||||++|.++...++|
T Consensus 153 ~~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y 222 (437)
T smart00640 153 ASDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYY 222 (437)
T ss_pred EEecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEE
Confidence 876 45799999999999999999865543 2345899999999998543 2359999999987678899
Q ss_pred EEeeecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCC-CCCCCCCCccccccccEEEEE
Q 014058 289 VLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDS-TQDDIDKGWSGVQTVPRAIWL 366 (431)
Q Consensus 289 ~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~-~~~~~~~gW~g~lslPR~L~l 366 (431)
++|.++++ .+|+|+... .....+++|+|+ |||+|+|.+++.+||||||||++++. ....+..+|+|+|||||+|+|
T Consensus 223 ~~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l 300 (437)
T smart00640 223 FVGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTL 300 (437)
T ss_pred EEEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEE
Confidence 99999973 479887642 112345899998 99999999875569999999999973 222333899999999999999
Q ss_pred e-cCCCeEEecchHHHHhhhcc
Q 014058 367 D-KSGKQLVQWPVEEIETLRGK 387 (431)
Q Consensus 367 ~-~~G~~L~q~Pv~el~~Lr~~ 387 (431)
+ ++| +|+|+|++||++||..
T Consensus 301 ~~~~g-~L~~~Pv~el~~lr~~ 321 (437)
T smart00640 301 DKTGG-KLLQWPVEELESLRNV 321 (437)
T ss_pred EecCC-EEEEeecHHHHhhhCc
Confidence 5 566 7999999999999954
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=7.8e-78 Score=598.37 Aligned_cols=299 Identities=43% Similarity=0.855 Sum_probs=248.0
Q ss_pred eeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccC
Q 014058 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (431)
Q Consensus 59 H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~d 138 (431)
||+|+.||||||||++|++|+||||||++|+++.|| +++||||+|+|||||+++++||.|++.+|++|||||||+++ +
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~ 78 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWG-NMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-D 78 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS--SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-T
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccc-eeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-C
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999986 6
Q ss_pred CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeec-CCcEEcC-CCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC
Q 014058 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFS-GNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (431)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~-~~Pvi~~-p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~ 216 (431)
+++++||||+.....+.|++|+|+|.+ ++|+|++ +||||.. |++ ...+||||+|+|++ +++|+|++|++.+.
T Consensus 79 ~~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~~-~~~~~m~~g~~~~~ 152 (308)
T PF00251_consen 79 DNLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWRE-DGRWYMLLGAGRDG 152 (308)
T ss_dssp TCEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEEC-TTEEEEEEEEEETT
T ss_pred CEEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEec-CCEEEEEEeccccC
Confidence 689999999987568999999997654 7999987 4999974 444 78899999988885 69999999999888
Q ss_pred cceEEEEEeCCCCCcEEcccccccCC-CCCceeeCcEEEeccCCccceecccCCCCeeeEEEEee----CCCCeeeEEEe
Q 014058 217 EGMAFVYWSWDFIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL----FSDKHDYYVLG 291 (431)
Q Consensus 217 ~G~i~ly~S~Dl~~W~~~~~~l~~~~-~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~----~~~~~~~Y~vG 291 (431)
.|++++|+|+||++|++.+.+..... .+.||||||||+|+..+. + ....+|||++|. .....+.|++|
T Consensus 153 ~g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-~------~~~~~~vl~~s~~g~~~~~~~~~Y~vG 225 (308)
T PF00251_consen 153 RGCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-G------TGKWVWVLIFSPQGIEDNGHGTYYMVG 225 (308)
T ss_dssp EEEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-S------SEEEEEEEEEEEESTTTTTTEEEEEEE
T ss_pred cceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-c------cceEEEEEEecccccccccccceEEeE
Confidence 89999999999999999987554432 478999999999995421 0 012367899998 34678999999
Q ss_pred eecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCC-CCCCCccccccccEEEEEecC
Q 014058 292 TYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQD-DIDKGWSGVQTVPRAIWLDKS 369 (431)
Q Consensus 292 ~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~-~~~~gW~g~lslPR~L~l~~~ 369 (431)
+||.++++|+++.. ..+++|+|+ |||+|+|.++.++|||+||||++++.... ..+.+|+|+|||||+|+|+++
T Consensus 226 ~~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~ 300 (308)
T PF00251_consen 226 DFDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDE 300 (308)
T ss_dssp EEETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETT
T ss_pred EecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEEC
Confidence 99777789987721 368999999 99999999975559999999999987422 236899999999999999754
Q ss_pred CCeEEecc
Q 014058 370 GKQLVQWP 377 (431)
Q Consensus 370 G~~L~q~P 377 (431)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 44799998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=5.1e-69 Score=531.49 Aligned_cols=286 Identities=40% Similarity=0.770 Sum_probs=245.5
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~ 144 (431)
||||||||++|++|+||||||++|.++.|+ +++||||+|+||+||+++++||.|+..+|..|||||||+++.+|+++||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~-~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~ 79 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWG-NMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLF 79 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCC-CcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEE
Confidence 899999999999999999999999999999 9999999999999999999999998888899999999998644999999
Q ss_pred EeeccC---CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-CcceE
Q 014058 145 YTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMA 220 (431)
Q Consensus 145 YTg~~~---~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-~~G~i 220 (431)
|||+.. ...+.|++|+|+|. +++|+|...+|++.+ +.....+||||+|++. +|+|+|+++++.+ ..|+|
T Consensus 80 YTg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i 152 (298)
T cd08996 80 YTGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRI 152 (298)
T ss_pred EeceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEE
Confidence 999864 46789999999853 279999988888863 2345679999997655 4999999999863 56899
Q ss_pred EEEEeCCCCCcEEccccc-ccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCC------CeeeEEEeee
Q 014058 221 FVYWSWDFIHWTKLDHPL-YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD------KHDYYVLGTY 293 (431)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~l-~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~------~~~~Y~vG~~ 293 (431)
.+|+|+||++|++.+.+. .....+.|||||+||+++++ .||||++|.+.. ..+.|++|++
T Consensus 153 ~ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~~ 219 (298)
T cd08996 153 LLYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGDF 219 (298)
T ss_pred EEEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEEE
Confidence 999999999999987542 33345679999999999842 299999998642 4579999999
Q ss_pred cCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCCCe
Q 014058 294 DPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ 372 (431)
Q Consensus 294 d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~L~l~~~G~~ 372 (431)
++. .|+++. ...+++|+|+ |||+|+|.++ ++|||+||||++++...+..+.+|+|+|||||+|+|++++ +
T Consensus 220 ~~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~-~ 290 (298)
T cd08996 220 DGT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG-R 290 (298)
T ss_pred ECC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-E
Confidence 986 555541 1257899998 9999999986 7999999999999987778899999999999999998765 7
Q ss_pred EEecchHH
Q 014058 373 LVQWPVEE 380 (431)
Q Consensus 373 L~q~Pv~e 380 (431)
|.|+|++|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999976
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=1.9e-56 Score=438.34 Aligned_cols=266 Identities=26% Similarity=0.444 Sum_probs=221.1
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCC--CCcceEEEEEeCCCccceecccccCCC-CccCCCCeEeecEEEccCCeEEEE
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDLINWIHLSHALCPS-GPYDINSCWSGSVTILPGDKPFIL 144 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~w--g~~~~WgHa~S~Dlv~W~~~~~aL~P~-~~~D~~gv~SGsav~~~dg~~~l~ 144 (431)
.||. ++|++|+||||||++|.+..| + .++||||+|+||+||+++++||.|. ..+|..|||||||++. +|+++||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~-~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~~-~g~~~l~ 77 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGL-RHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIKG-EGTYHAF 77 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccC-CceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEee-CCEEEEE
Confidence 4888 899999999999999999888 7 8999999999999999999999884 5667899999999874 8999999
Q ss_pred EeeccC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-----CCc
Q 014058 145 YTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNE 217 (431)
Q Consensus 145 YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-----~~~ 217 (431)
|||+.. ...+.|++|+|+|+ ++|+|.+.+||+..+.++...+||||+|++.+.+|+|+|+++++. +..
T Consensus 78 YTg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~ 152 (280)
T cd08995 78 YTGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRR 152 (280)
T ss_pred EEEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCC
Confidence 999764 25678999999885 799998778888755555567899999766645799999999875 356
Q ss_pred ceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC-CCeeeEEEeeecCC
Q 014058 218 GMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDPQ 296 (431)
Q Consensus 218 G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d~~ 296 (431)
|+|.+|+|+||++|++.+. +.....+.|||||++|+++ | +|+|++|.+. .....|++|+..
T Consensus 153 g~i~~~~S~Dl~~W~~~~~-~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~-- 214 (280)
T cd08995 153 GCIALFTSKDLKNWEYEEP-FYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP-- 214 (280)
T ss_pred eEEEEEEeCCcCcceecCc-eecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC--
Confidence 8999999999999999864 4444456799999999997 5 8999998753 356789999632
Q ss_pred CCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCC
Q 014058 297 MDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSG 370 (431)
Q Consensus 297 ~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~L~l~~~G 370 (431)
.+.|.... ...|| |+ |||+|+|.++ +||||||||++++...++.+.+|+|||| ||+|.+.+||
T Consensus 215 ~g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g 278 (280)
T cd08995 215 FGPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDG 278 (280)
T ss_pred CCCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCC
Confidence 23554332 23589 98 9999999985 8999999999998877777899999999 6888888888
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=1.1e-39 Score=316.87 Aligned_cols=243 Identities=28% Similarity=0.388 Sum_probs=192.5
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceeccccc--CCCCccCCCCeEeecEEEccCCeEEEEEe
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSGPYDINSCWSGSVTILPGDKPFILYT 146 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL--~P~~~~D~~gv~SGsav~~~dg~~~l~YT 146 (431)
||+.+. |+||||||++|.+..|+....|+||+|+||+||++.+.+| .|...+|..+||+|+++...+|+++||||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 555443 8899999999998776535678999999999999999887 55667888999999999864499999999
Q ss_pred eccC--CCceeEEEEEecCCCCCccceeeeecCCcEE-----cCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-CCcc
Q 014058 147 GIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-----TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEG 218 (431)
Q Consensus 147 g~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi-----~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-~~~G 218 (431)
+... ...+.+++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9863 46788999999986 799998766653 222333457899999766533399999999875 3467
Q ss_pred eEEEEEeCCCCCcEEcccc--cccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC-CCeeeEEEeeecC
Q 014058 219 MAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDP 295 (431)
Q Consensus 219 ~i~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d~ 295 (431)
+|.+|+|+|+++|++.+.+ ........++|||++|+++ | +|+|+++... ...+.|++|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEeccc
Confidence 8999999999999998753 2223345799999999997 5 8999988764 4568899999876
Q ss_pred CCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCC
Q 014058 296 QMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANES 343 (431)
Q Consensus 296 ~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~ 343 (431)
. .|+|.. ...+|.|. |||+|++.+..++|++++|||.++
T Consensus 225 ~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 G--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred C--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 4 455542 35789998 999999987546899999999987
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=1.6e-36 Score=294.86 Aligned_cols=269 Identities=28% Similarity=0.445 Sum_probs=204.1
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccC----CCCccCCCCeEeecEEEccCCeEEE
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~----P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
|||+ +++++|+||||||++|.+ + ..+|+|++|+||+||++++.++. |....+..++|+|+++...+|+++|
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~-~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l 75 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---G-NPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYL 75 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---C-CceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEE
Confidence 7999 999999999999999865 4 78999999999999999998874 6667778899999999864499999
Q ss_pred EEeeccC-CCceeEEEEEecCCCCCccceeeeecCCcEEcC-CCCCCCCCccCCeEEEecCCCeEEEEEeeee-CCcceE
Q 014058 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEGMA 220 (431)
Q Consensus 144 ~YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~-p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-~~~G~i 220 (431)
+||+... ...+.+++|+|+|+. ..|++...+||+.. +.......+|||+|+ .+++|+|||++++.. +..+.|
T Consensus 76 ~yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~-~d~dG~~y~~~~~~~~~~~~~i 150 (286)
T cd08772 76 YYTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGI 150 (286)
T ss_pred EEEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEE-EcCCCCEEEEEccccCCCCCeE
Confidence 9999753 356889999998874 35666544566532 222345689999965 445699999998764 235678
Q ss_pred EEEEeCCCCCcEEcccc--cccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC------CCeeeEEEee
Q 014058 221 FVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS------DKHDYYVLGT 292 (431)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~------~~~~~Y~vG~ 292 (431)
.+++|+|+.+|+..+.. ........++|||++|+++ | +|+|++|... .....|++++
T Consensus 151 ~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~ 215 (286)
T cd08772 151 FLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSE 215 (286)
T ss_pred EEEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEcc
Confidence 99999999999876543 1223356799999999997 5 8888888754 3456677776
Q ss_pred ecCCCCeeecCCCCC-CCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccccccEEEE
Q 014058 293 YDPQMDIFSPDTDFH-GNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365 (431)
Q Consensus 293 ~d~~~~~f~p~~~~~-~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~L~ 365 (431)
.+. +.|.+..... ........|.+. +||++.|.+. ++|+++++|+.++..... ...+|+++|+|||+|+
T Consensus 216 ~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 216 SDT--GPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred CCC--CCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 543 4665443110 001123467777 9999999986 799999999999875433 5679999999999873
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.95 E-value=6.9e-26 Score=226.84 Aligned_cols=194 Identities=22% Similarity=0.233 Sum_probs=136.7
Q ss_pred cCCCcceE-ECCEEEEEEEECCCC----CCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 68 NDPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 68 NDPnG~i~-~~G~YHlFyq~~P~~----~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
-|..|-+. ++|..-+|++..|.. +.|+ .+||||++|+||++|++.+. |.|+..+|..|||||||++..||+++
T Consensus 8 ~d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~-~~~wgh~~S~dlv~W~~~~~-l~p~~~~d~~g~wSGsa~~~~dg~~~ 85 (349)
T cd08997 8 QDRDGEVASYNGYEVIFALTADRNLDPDDRHG-DARIGYFYSRAGGNWIDGGK-VFPDGLSPGSREWSGSATLDDDGTVQ 85 (349)
T ss_pred ECCCCCEEEECCEEEEEEEecCCCCCCCCCcC-ceEEEEEEeCCCCcccCCCc-cCCCCcccCCCeEcceEEEeCCCeEE
Confidence 35556444 677644898887764 4577 99999999999999999554 66888899999999999986679999
Q ss_pred EEEeeccC----CCceeEEEEEecCCCC-CccceeeeecCCcEEcCC--------------CCCCCCCccCCeEEEecCC
Q 014058 143 ILYTGIDA----SGQQVQNLAMPENLSD-PLLKDWVKFSGNPVMTPP--------------NGVKDDMFRDPTTAWQAPD 203 (431)
Q Consensus 143 l~YTg~~~----~~~~~q~lA~S~D~~d-~~l~~w~k~~~~Pvi~~p--------------~~~~~~~~RDP~Vv~~~~~ 203 (431)
|||||+.+ .+...|++|.+++... .-+..|++. .+++.++ +.....+||||+|+..+++
T Consensus 86 lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~--~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~ 163 (349)
T cd08997 86 LFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDH--HELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPET 163 (349)
T ss_pred EEEeccccCCCCCCCceEEEEEEECCCcceEecccCcc--ceeeeCCCceEEeccccccccccCccCcccCCEEEecCCC
Confidence 99999853 2456778877654310 001233222 2344321 1123568999997555447
Q ss_pred CeEEEEEeeeeC-C---------------------------cceEEEE--EeCCCCCcEEcccccccCCCCCceeeCcEE
Q 014058 204 GRWRVLVGGQID-N---------------------------EGMAFVY--WSWDFIHWTKLDHPLYSVQETGMWECPDIF 253 (431)
Q Consensus 204 g~~~M~~ga~~~-~---------------------------~G~i~ly--~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf 253 (431)
|+|||+++++.. . .|+|.++ +|+|+.+|++.++++....-..+||||++|
T Consensus 164 G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 164 GKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVV 243 (349)
T ss_pred CcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEE
Confidence 999999998752 2 3566665 677999999987544322234579999999
Q ss_pred EeccCCccceecccCCCCeeeEEEEee
Q 014058 254 PVSINGTIGVDTSVLNPGVKHVLKTSL 280 (431)
Q Consensus 254 ~l~~~g~~~~~~~~~~~~~k~vl~~s~ 280 (431)
+++ | ||+|++|.
T Consensus 244 ~~~--g-------------k~yL~~s~ 255 (349)
T cd08997 244 FHN--G-------------KYYLFTIS 255 (349)
T ss_pred EEC--C-------------EEEEEEeC
Confidence 998 6 88888774
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.91 E-value=3.5e-23 Score=203.97 Aligned_cols=190 Identities=21% Similarity=0.332 Sum_probs=141.3
Q ss_pred eeeecCCCCccCCCcceEE-CCEEEEEEEECCCCCC---CCCcceEEEEEeCCCc-cceecccccCCC--CccCCCCeEe
Q 014058 58 YHFRPPQNWINDPNGPMYY-KGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLI-NWIHLSHALCPS--GPYDINSCWS 130 (431)
Q Consensus 58 ~H~~p~~gw~NDPnG~i~~-~G~YHlFyq~~P~~~~---wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~--~~~D~~gv~S 130 (431)
-+|..+..++.+|. +++. +|+||||||..|.+.. |-....|+||+|+|+. +|+..+++|.|+ ..+|..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46788888999999 6775 4799999999887643 2113569999999987 899999999887 4678899999
Q ss_pred ecEEEccCCeEEEEEeeccC-------CCceeEEEEEecCCCCCccceeeeecCCcEEcC-C-----------------C
Q 014058 131 GSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-P-----------------N 185 (431)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~-p-----------------~ 185 (431)
++++.. +|+++|+||+... ...+.+++|+|.+.. .+|++. .+||+.+ + .
T Consensus 83 P~vi~~-~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKRF-DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEEE-CCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 999874 8999999998753 235677888887642 366664 3454421 0 0
Q ss_pred C-------------------------------------------CCCCCccCCeEEEecCCCeEEEEEeeeeC----Ccc
Q 014058 186 G-------------------------------------------VKDDMFRDPTTAWQAPDGRWRVLVGGQID----NEG 218 (431)
Q Consensus 186 ~-------------------------------------------~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~----~~G 218 (431)
+ ....++|||+| |+ .+|+|||+++++.+ ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCc
Confidence 0 01245799995 56 36999999998763 467
Q ss_pred eEEEEEeCCCCCcEEcccccc------cC---CCCCceeeCcEE-Eec
Q 014058 219 MAFVYWSWDFIHWTKLDHPLY------SV---QETGMWECPDIF-PVS 256 (431)
Q Consensus 219 ~i~ly~S~Dl~~W~~~~~~l~------~~---~~~~~wECPdlf-~l~ 256 (431)
++.+|+|+|+++|++.+.+.. .. ....+||||++| +.+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 899999999999999875531 11 136799999999 776
No 12
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.84 E-value=1.2e-19 Score=179.50 Aligned_cols=162 Identities=21% Similarity=0.298 Sum_probs=123.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCC--CCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEE
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGP--LFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~--~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~ 144 (431)
+.+|. +++++|+||||||++|... .++ .++|+||+|+||++|++.++++. +..++.+++++.+.+|+++|+
T Consensus 79 ~WAP~-v~~~~G~y~myys~~~~~~~~~~~-~~~i~~a~S~Dl~~w~~~~~~~~-----~~~~~iD~~vf~~~dg~~yl~ 151 (294)
T cd08984 79 FWAPE-VVWHGGVYHMYVTYIPGVPPDWGG-PRRIVHYTSPNLWDWTFVGRVDL-----DSDRVIDACVFKLPDGRWRMW 151 (294)
T ss_pred eeCce-EEEECCEEEEEEEecCCCCcccCC-CcEEEEEECCCcCcceECCcccc-----CCCCcEEeEEEEeCCCEEEEE
Confidence 45788 7899999999999998653 234 78999999999999999887632 235789999988767999999
Q ss_pred EeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEE
Q 014058 145 YTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW 224 (431)
Q Consensus 145 YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~ 224 (431)
||+.. ..+.+++|.|+|+ .+|++. .+++.. ...++|+|+ + .+|+|||+++. ..| +.+|+
T Consensus 152 y~~~~--~~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v~-k-~~g~yym~~~~---~~g-~~~~~ 210 (294)
T cd08984 152 YKDER--RGSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNVF-R-WKGYYWMIIDE---WKG-LGVYR 210 (294)
T ss_pred EECCC--CCeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCee-E-ECCEEEEEEcC---Cce-EEEEE
Confidence 99753 3456688999885 799984 355541 134899964 4 37899999854 234 67999
Q ss_pred eCCCCCcEEcccccccC----CCCCceeeCcEEEec
Q 014058 225 SWDFIHWTKLDHPLYSV----QETGMWECPDIFPVS 256 (431)
Q Consensus 225 S~Dl~~W~~~~~~l~~~----~~~~~wECPdlf~l~ 256 (431)
|+|+.+|++.+.++... ....+.+||++|+.+
T Consensus 211 S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 211 SKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred CCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 99999999988766532 123467999999876
No 13
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.84 E-value=1.1e-19 Score=177.64 Aligned_cols=191 Identities=19% Similarity=0.241 Sum_probs=138.4
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCC-CccCCCCeEeecEEEccCCeEE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPS-GPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~-~~~D~~gv~SGsav~~~dg~~~ 142 (431)
.||++||+ +++++|+||||++..+.+ +. ...|.+++|+||+||++++.+|.+. ..++..++|+++++. .+|+++
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~--~~-~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy 79 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAG--GE-QTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYY 79 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCC--CC-eeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEE
Confidence 46899999 578899999999876432 22 4679999999999999999998765 345667999999987 489999
Q ss_pred EEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEE
Q 014058 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (431)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~l 222 (431)
|+||+. +.+++|+|+|.. ..|++..++|++.... .....+||.| |.+++|++||++++. +.+.+
T Consensus 80 ~yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~v-f~d~dG~~yl~~~~~----~~~~i 143 (275)
T cd09004 80 FYFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDV-FIDDDGQAYLYWGGW----GHCNV 143 (275)
T ss_pred EEEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCe-EECCCCCEEEEEcCc----CCEEE
Confidence 999975 457899998864 4677644678875432 2357899996 454689999999863 22233
Q ss_pred -EEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEEEe
Q 014058 223 -YWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (431)
Q Consensus 223 -y~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 291 (431)
--|+|+.+|+.....+ ......+.|||.+|+.+ | +++|++|........|.++
T Consensus 144 ~~l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 144 AKLNEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEECCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 3478998886543222 11234589999999987 6 7888888754332344444
No 14
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.83 E-value=1.8e-19 Score=175.75 Aligned_cols=147 Identities=16% Similarity=0.259 Sum_probs=113.9
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecc-cccCC--CCccCCCCeEeecEEEccCCeEEEEE
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCP--SGPYDINSCWSGSVTILPGDKPFILY 145 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~-~aL~P--~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (431)
||. +++++|+||||||.++.. + .++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+|
T Consensus 2 nP~-v~~~~G~y~l~y~~~~~~---~-~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Y 75 (268)
T cd08993 2 NPA-VVYDNGEFYLLYRAAGND---G-VIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITY 75 (268)
T ss_pred cCe-EEEECCEEEEEEEEECCC---C-ceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEE
Confidence 564 889999999999987643 4 6899999999999999975 44666 5567788999999886 599999999
Q ss_pred eeccC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEe-cCCCeEEEEEeeee---CCcceE
Q 014058 146 TGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQ-APDGRWRVLVGGQI---DNEGMA 220 (431)
Q Consensus 146 Tg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~-~~~g~~~M~~ga~~---~~~G~i 220 (431)
|+... ...+++++|.|+|+ .+|+|.. .+ +. + ..||+.+ |. ..+|+|+|++.... +..+.|
T Consensus 76 ta~~~~~~~~~i~lA~S~D~-----~~W~~~~-~~-~~-~------~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I 140 (268)
T cd08993 76 AARPNAPNGTRIGLATTKDF-----ITFERLG-TS-LV-P------NNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDM 140 (268)
T ss_pred EccCCCCCCcEEEEEEeCCc-----ceEEEec-cc-CC-C------CCCCEEE-eeEEECCEEEEEEccccCCCCCCCcE
Confidence 99762 35678999999986 7999973 21 11 1 2378874 43 24899999996442 246789
Q ss_pred EEEEeCCCCCcEEccc
Q 014058 221 FVYWSWDFIHWTKLDH 236 (431)
Q Consensus 221 ~ly~S~Dl~~W~~~~~ 236 (431)
.+++|+||.+|+..+.
T Consensus 141 ~lA~S~Dl~~W~~~~~ 156 (268)
T cd08993 141 WLSFSPDLVHWGNHRF 156 (268)
T ss_pred EEEECCCcCccCCCeE
Confidence 9999999999987653
No 15
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.79 E-value=1e-17 Score=164.31 Aligned_cols=196 Identities=20% Similarity=0.212 Sum_probs=135.7
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc-cCCCCeEeecEEEccCCeEEE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-YDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~-~D~~gv~SGsav~~~dg~~~l 143 (431)
+.+-||. +++++|+|+||+.... ..+|.+++|+||+||+.++.+|.+... .+..++|.+.++. .+|+++|
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~-------~~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~ 76 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGN-------GPNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVL 76 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCC-------CCcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEE
Confidence 4567998 7888999999997542 256999999999999999988877654 4456788888776 4899999
Q ss_pred EEeeccC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcc---e
Q 014058 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG---M 219 (431)
Q Consensus 144 ~YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G---~ 219 (431)
+|++... ...+.+++|+|+|.. ..|++... +++..+. .....+||.|+ .+++|++||+++......+ .
T Consensus 77 ~y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~-~~~~~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~ 148 (287)
T cd08999 77 YYSARDKGSGGQCIGVATADSPL----GPFTDHGK-PPLCCPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTP 148 (287)
T ss_pred EEEeecCCCCCEEEEEEECCCCC----CCCccCCc-ceEecCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCce
Confidence 9999764 245677889988753 36887543 3433222 23567999964 5468999999987542211 2
Q ss_pred EEEE-EeCCCCCcEEcccccccC---CCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCe--eeEEEee
Q 014058 220 AFVY-WSWDFIHWTKLDHPLYSV---QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKH--DYYVLGT 292 (431)
Q Consensus 220 i~ly-~S~Dl~~W~~~~~~l~~~---~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~--~~Y~vG~ 292 (431)
+.+. .|+|+.+|......+... ....++|||.+|+.+ | +|+|++|...... ..|.+|-
T Consensus 149 i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~~~~~~~~y~i~~ 212 (287)
T cd08999 149 IYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGGCCSGASTYAVGV 212 (287)
T ss_pred EEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCCccCCCCCEEEEE
Confidence 3333 378998886433222111 234589999999996 6 8888888643222 2466653
No 16
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.74 E-value=1.5e-16 Score=155.62 Aligned_cols=195 Identities=18% Similarity=0.252 Sum_probs=137.6
Q ss_pred CCCcceEECCEEEEEEEECCCCCC---CCCcceEEEEEeCCCccceecccccCCCC-c-cCCCCeEeecEEEccCCeEEE
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLINWIHLSHALCPSG-P-YDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~---wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~-~-~D~~gv~SGsav~~~dg~~~l 143 (431)
||. +++++|+|+||.......+. +. ...|..++|+||+||+.++.+|.+.. . ++..++|.++++. .+|+++|
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~-~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~ 78 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFC-MNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYL 78 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccc-cceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEE
Confidence 888 77889999999987644331 22 34599999999999999999887553 2 5678999999886 5999999
Q ss_pred EEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEE
Q 014058 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVY 223 (431)
Q Consensus 144 ~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly 223 (431)
+||+......+.+++|+|+|.. ..|++....|++.... ......||.| |.+++|++||+++.. .+....-
T Consensus 79 yy~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~v-f~d~dG~~yl~~~~~---~~~~~~~ 148 (274)
T cd08990 79 YFPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAV-FIDDDGQAYLYWGGG---LGLRVAK 148 (274)
T ss_pred EEEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcE-EECCCCCEEEEECCc---CCEEEEE
Confidence 9998653345678899998763 4688764445553211 2346789996 455689999999874 2333344
Q ss_pred EeCCCCCcEEccccccc-----CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEEEe
Q 014058 224 WSWDFIHWTKLDHPLYS-----VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (431)
Q Consensus 224 ~S~Dl~~W~~~~~~l~~-----~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 291 (431)
.|+|+.+|+.....+.. ....+..|+|.+|+.+ | +++|++|........|.+.
T Consensus 149 l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 149 LKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred eCccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 57899999754433321 1234568999999987 6 8888888754344455543
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.70 E-value=1.3e-15 Score=147.33 Aligned_cols=191 Identities=21% Similarity=0.227 Sum_probs=130.8
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccC----CCCccCCCCeEeecEEEccCCeEEEE
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFIL 144 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~----P~~~~D~~gv~SGsav~~~dg~~~l~ 144 (431)
||. +++++|+|+||+..... . ...+..++|+||++|+..+.+|. +....+..++|+++++.. +|+++|+
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~-~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~~-~g~yyl~ 74 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----A-GPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIYY-EGKYYLY 74 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----C-CCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEEE-CCEEEEE
Confidence 888 78899999999987542 2 35689999999999999998875 344455678999999874 8999999
Q ss_pred EeeccC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC--CcceEE
Q 014058 145 YTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMAF 221 (431)
Q Consensus 145 YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~--~~G~i~ 221 (431)
||+... ...+.+++|+|+|. ..|.+... ...+. ......+||.|+ .+++|++||+++.... ..+.|.
T Consensus 75 y~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~~-~~~~~~iDp~vf-~d~dg~~yl~~~~~~~~~~~~~i~ 144 (271)
T cd08978 75 YSVSDFDYNGSGIGVATSEDP-----TGPFEDKV---IRPPT-SNNGNSIDPTVF-KDDDGKYYLYYGSGDPGAGFGGIY 144 (271)
T ss_pred EEcccCCCCcccEEEEECCCC-----CCCccccc---cCcCc-cCCCCccCcceE-EcCCCCEEEEEecccCCCCCCcEE
Confidence 998643 24567889999886 35544321 11111 123467899965 4467999999987642 245678
Q ss_pred EEEeCCCCCcEEccccc---ccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEEEee
Q 014058 222 VYWSWDFIHWTKLDHPL---YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (431)
Q Consensus 222 ly~S~Dl~~W~~~~~~l---~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 292 (431)
++++++...|.. +.+. .......+.|+|.+|+.+ | +|+|++|........|.++-
T Consensus 145 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~~ 202 (271)
T cd08978 145 ISELTDDLTKPT-GPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIGY 202 (271)
T ss_pred EEEECccccccc-CCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEEE
Confidence 888876544432 1221 112234589999999987 5 88888887533233455553
No 18
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.66 E-value=7e-15 Score=145.01 Aligned_cols=180 Identities=16% Similarity=0.137 Sum_probs=125.5
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCC-ccCCCCeEeecEEEccCCeEEEEEee
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDKPFILYTG 147 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg 147 (431)
||. +++++|+|+||+..... ...+..++|+||++|+.++.++.+.. .++..++|.++++. .+|+++|+||+
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~------~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~ 73 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD------GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSA 73 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC------CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEe
Confidence 888 78899999999875432 23588999999999999998887654 36677999999877 48999999998
Q ss_pred ccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC---cceEEEE
Q 014058 148 IDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN---EGMAFVY 223 (431)
Q Consensus 148 ~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~---~G~i~ly 223 (431)
.... ..+.+++|+|+|.. ..|++... +.+.. .....||.++ .+++|+|||+++..... .+....-
T Consensus 74 ~~~~~~~~~i~~a~s~~p~----gp~~~~~~-~~~~~-----~~~~iD~~vf-~d~dG~~yl~~~~~~~~~~~~~i~~~~ 142 (294)
T cd08991 74 NDRDEKTEHIGVAVSDSPL----GPFRDIKK-PPIDF-----EPKSIDAHPF-IDDDGKPYLYYSRNNYGNRVSDIYGTE 142 (294)
T ss_pred ccCCCCcceEEEEEeCCCC----CCCCcCCC-CcccC-----CCcccCCceE-ECCCCCEEEEEEecCCCCcccceEEEE
Confidence 7543 55778899998763 36776432 22221 1346799965 44679999999865422 2344444
Q ss_pred EeCCCCCcEEccc----cccc--------------CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC
Q 014058 224 WSWDFIHWTKLDH----PLYS--------------VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (431)
Q Consensus 224 ~S~Dl~~W~~~~~----~l~~--------------~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 282 (431)
-|.|+.+|..... ++.. .....+.|+|.+++.+ | +|+|++|...
T Consensus 143 l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~ 204 (294)
T cd08991 143 LVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSANH 204 (294)
T ss_pred EccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECCC
Confidence 5788877752111 1111 0123479999999997 5 7888887643
No 19
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.65 E-value=7.2e-15 Score=147.50 Aligned_cols=177 Identities=18% Similarity=0.259 Sum_probs=127.1
Q ss_pred cccceeeecCCCCc-cCCCcceEECCEEEEEEEECCC-----------CC--CCCCcceEEEEEeCCCccceecccccCC
Q 014058 54 YLTSYHFRPPQNWI-NDPNGPMYYKGVYHLFYQYNPL-----------GP--LFGDKMIWAHSVSYDLINWIHLSHALCP 119 (431)
Q Consensus 54 ~Rp~~H~~p~~gw~-NDPnG~i~~~G~YHlFyq~~P~-----------~~--~wg~~~~WgHa~S~Dlv~W~~~~~aL~P 119 (431)
..|..=+.+..+.. .||..+++.+|+|||||++... .+ .|. ...++||+|+||++|++.+++|.+
T Consensus 23 ~~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~-~y~I~~A~S~Dgv~W~~~g~~L~~ 101 (349)
T cd08992 23 IYPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWD-KCEIWHATSKDGWTWKEEGPAIGR 101 (349)
T ss_pred cCcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCC-ceEEEEEECCCCCCceECCccccC
Confidence 34455555555544 6998799999999999997532 11 245 678999999999999999988865
Q ss_pred C--CccCCCCeEeecEEEccCCeEEEEEeeccCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCC---------
Q 014058 120 S--GPYDINSCWSGSVTILPGDKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--------- 184 (431)
Q Consensus 120 ~--~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p--------- 184 (431)
. ..+|..++|.+.++. .+|+++|+|++.... ..+.+++|+|+++. ..|++. .+||+.+.
T Consensus 102 ~~~g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~ 175 (349)
T cd08992 102 GEKGAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDE 175 (349)
T ss_pred CCCCCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeecc
Confidence 4 357889999999876 599999999975421 23577899998763 359886 57888542
Q ss_pred ---------CCCCCCCccCCeEEEecCCCeEEEEEeeeeC--------CcceEEEEEeCCCC-CcEEcc-cccc
Q 014058 185 ---------NGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--------NEGMAFVYWSWDFI-HWTKLD-HPLY 239 (431)
Q Consensus 185 ---------~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~--------~~G~i~ly~S~Dl~-~W~~~~-~~l~ 239 (431)
..++...+.||.|+.. +|+|||++.+... ..-++.+..|++.. -|+... .|+.
T Consensus 176 ~~~~~~~~~g~wD~~~v~~P~v~~~--~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~~~nPi~ 247 (349)
T cd08992 176 DNRFLVKKKGSFDSHKVHDPCLFPF--NGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKSPYNPIT 247 (349)
T ss_pred CceeEeccCCCcccCceECCEEEEE--CCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeCCCCccc
Confidence 1245667899996544 7999999966431 12357888998875 577643 3443
No 20
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.61 E-value=4.1e-14 Score=140.00 Aligned_cols=170 Identities=23% Similarity=0.272 Sum_probs=119.5
Q ss_pred ccCCCcceEE--CCEEEEEEEE-C---CCC-CCCCCcceEEEEEeCC-CccceecccccCCCCccCCCCeEeecEEEccC
Q 014058 67 INDPNGPMYY--KGVYHLFYQY-N---PLG-PLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (431)
Q Consensus 67 ~NDPnG~i~~--~G~YHlFyq~-~---P~~-~~wg~~~~WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~d 138 (431)
.-||. +++. +|+|||||.. . |.. ..|.....+++|+|+| |+||++++.++.++..++...+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 57999 7887 7899999942 1 111 2344246799999999 99999998776664444556789999876 49
Q ss_pred CeEEEEEeeccC-----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 139 DKPFILYTGIDA-----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 139 g~~~l~YTg~~~-----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
|+++||||.... .....+++|+|+|. .+|++.+ ++... .....||.|+ ...+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~~--~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFVG--RVDLD-----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCCc-----CcceECC--ccccC-----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997532 13456788999884 6898753 33211 1345799964 54579999999653
Q ss_pred eCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEec
Q 014058 214 IDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 214 ~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
.. ...+.+..|+|+.+|+..+..+. ...-|.|.+|+.+
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~~i~----~~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGPVLG----DRPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCcccc----CCCCCCCCeeEEC
Confidence 22 22456788999999997653332 1234999999986
No 21
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.60 E-value=7.1e-14 Score=137.71 Aligned_cols=190 Identities=21% Similarity=0.206 Sum_probs=126.2
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc-------cCCCCeEeecEEEccCC
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-------YDINSCWSGSVTILPGD 139 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~-------~D~~gv~SGsav~~~dg 139 (431)
+.||. +++++|+|+||+... ++++++|+||+||++.+.++.+... .+..++|.+.++. .+|
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~----------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g 68 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN----------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNG 68 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC----------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECC
Confidence 36998 789999999998753 4899999999999999988865432 2456799999876 499
Q ss_pred eEEEEEeeccCC-CceeEEEEEecCC-CCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCc
Q 014058 140 KPFILYTGIDAS-GQQVQNLAMPENL-SDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (431)
Q Consensus 140 ~~~l~YTg~~~~-~~~~q~lA~S~D~-~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~ 217 (431)
+++||||+.... ....+++|+|+|. . ..|++. +||+....+......+||.++ .+++|++||++++.. .
T Consensus 69 ~yyl~ys~~~~~~~~~~i~va~s~~~~~----gpw~~~--~~v~~~~~~~~~~~~iDp~vf-~d~dG~~Yl~~~~~~--~ 139 (288)
T cd08998 69 KYYLYYSVSTFGSNRSAIGLATSDTLPD----GPWTDH--GIVIESGPGRDDPNAIDPNVF-YDEDGKLWLSFGSFW--G 139 (288)
T ss_pred EEEEEEEEEeCCCCceEEEEEEeCCCCC----CCCEEc--ceeeecCCCCCCcccccCCEE-EcCCCCEEEEeeecc--C
Confidence 999999986542 4567789999875 2 479874 588754332123467899965 546899999998642 1
Q ss_pred ceEEEEE-eCC---CCCcEEcccccccCC-CCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCC---eeeEE
Q 014058 218 GMAFVYW-SWD---FIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDK---HDYYV 289 (431)
Q Consensus 218 G~i~ly~-S~D---l~~W~~~~~~l~~~~-~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~---~~~Y~ 289 (431)
| +.+.+ ++| ...|......+.... .....|-|.+|+-+ | +++|++|..... ...|.
T Consensus 140 ~-i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~~~~~~~~~~y~ 203 (288)
T cd08998 140 G-IFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYGGCCAGEDSTYN 203 (288)
T ss_pred C-EEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcchhcCCCCCceE
Confidence 2 22333 223 123321111121111 23468999999987 5 788888753221 24455
Q ss_pred Eeee
Q 014058 290 LGTY 293 (431)
Q Consensus 290 vG~~ 293 (431)
++-+
T Consensus 204 v~~~ 207 (288)
T cd08998 204 IRVG 207 (288)
T ss_pred EEEE
Confidence 5443
No 22
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.53 E-value=1.2e-12 Score=127.93 Aligned_cols=189 Identities=19% Similarity=0.092 Sum_probs=128.7
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCC----ccCCCCeEeecEEEcc-CCeEEE
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG----PYDINSCWSGSVTILP-GDKPFI 143 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~----~~D~~gv~SGsav~~~-dg~~~l 143 (431)
|+. +++++|+|++|-.....+..+ ...|...+|+||+||+.++.+|.+.. .....++|.++++..+ +|+++|
T Consensus 5 ~~~-i~~~~~~yY~ygs~~~~~~~~--~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m 81 (265)
T cd08985 5 GGG-ILKVGGTYYWYGENKGGGDTA--FGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVM 81 (265)
T ss_pred cCc-eEEECCEEEEEEEecCCCCcc--cccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEE
Confidence 454 788999999998765432111 34688899999999999999997764 2345678999988753 689999
Q ss_pred EEeeccC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEE
Q 014058 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (431)
Q Consensus 144 ~YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~l 222 (431)
+|+.... .....+++|+|++.. ..|+... .+. +. ....|||.|+ .++||++||++++..+ ..+.+
T Consensus 82 ~~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~---~~~~~Dp~vf-~DdDG~~Yl~~~~~~~--~~i~i 147 (265)
T cd08985 82 WMHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PL---GYQSRDFGLF-VDDDGTAYLLYSDRDN--SDLYI 147 (265)
T ss_pred EEEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CC---CCCccCCceE-EcCCCCEEEEEecCCC--CceEE
Confidence 9998643 245678899998764 3566532 221 11 2457999965 5578999999987532 23445
Q ss_pred EE-eCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC---CCeeeEEEee
Q 014058 223 YW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS---DKHDYYVLGT 292 (431)
Q Consensus 223 y~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~---~~~~~Y~vG~ 292 (431)
.+ ++|+..+... +.. .......|||.+|+.+ | +|+|+.|... .....|++.+
T Consensus 148 ~~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~ 203 (265)
T cd08985 148 YRLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT 203 (265)
T ss_pred EEeCCCcccccce--EEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec
Confidence 55 3677777532 211 1234578999999997 5 8888887632 2345666654
No 23
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.45 E-value=6.2e-12 Score=123.94 Aligned_cols=178 Identities=18% Similarity=0.207 Sum_probs=117.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc--c----CCCCeEeecEEEccC
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP--Y----DINSCWSGSVTILPG 138 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~--~----D~~gv~SGsav~~~d 138 (431)
+..-||. +++++|+|+||.... .+ ...+..++|+||+||++++.+|.+... + ...++|.+.++. .+
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~----~~--~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSF----EY--FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HD 77 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCc----cc--CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-EC
Confidence 4567999 888999999885321 11 235889999999999999988854321 1 345799999877 49
Q ss_pred CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC---
Q 014058 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--- 215 (431)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~--- 215 (431)
|+++|+|+.........+.+|+|++.. ..|+. |++.. ....||.|+ .+++|++||+++....
T Consensus 78 g~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf-~d~dG~~Y~~~~~~~~~~~ 142 (288)
T cd09000 78 GTFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLF-FDDDGKVYLVGNGWDERRG 142 (288)
T ss_pred CEEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCcee-EcCCCCEEEEecccCCccc
Confidence 999999998653234456788887764 35652 33321 145799965 4468999999886432
Q ss_pred --CcceEEEEEeCCCCCcEEcccc--cccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 216 --NEGMAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 216 --~~G~i~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
..+.+.+.+. |...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 143 ~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 143 YNGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred cCCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 1234555543 33345444332 2222233578999999987 5 788888753
No 24
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.43 E-value=1.6e-11 Score=120.15 Aligned_cols=183 Identities=20% Similarity=0.246 Sum_probs=126.9
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccC--CCCe-EeecEEEccCCeE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD--INSC-WSGSVTILPGDKP 141 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D--~~gv-~SGsav~~~dg~~ 141 (431)
+..-||. +++++|+|+||+...+.. ..+..++|+||+||+..+.++.+....+ ..+. |.+.++. .+|++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~------~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~-~~g~y 79 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG------PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHY-INGKY 79 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE------SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEE-ETTEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC------CeEEEEECCCCcccccceeeecccccccccccccccCCeEEE-cCCeE
Confidence 5567999 889999999998765432 4588999999999999998887664333 2333 9999876 59999
Q ss_pred EEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC--cce
Q 014058 142 FILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--EGM 219 (431)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~--~G~ 219 (431)
+|+|+.........+.+|+|++.. ..|+... ...+. .....||.|+ .+++|++||+++..... .+.
T Consensus 80 y~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf-~d~dG~~Yl~~~~~~~~~~~~~ 147 (286)
T PF04616_consen 80 YMYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVF-VDDDGKYYLYYGSWDNGDPGGG 147 (286)
T ss_dssp EEEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEE-EETTSEEEEEEEESTTTSSEEE
T ss_pred EEEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEE-EecCCCcEEeCcccCCCcccee
Confidence 999993222355668899998764 4788653 22222 2356799965 44679999999886532 234
Q ss_pred EEEEE-eCCCCCcEEcc-cccccC---CCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC
Q 014058 220 AFVYW-SWDFIHWTKLD-HPLYSV---QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (431)
Q Consensus 220 i~ly~-S~Dl~~W~~~~-~~l~~~---~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 282 (431)
|.+.+ ++|...+.... ..+... ......|+|.+|+.+ | +++|++|...
T Consensus 148 i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 148 IYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp EEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred EEeecccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 55555 46777766543 222222 235689999999997 5 7888888643
No 25
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.43 E-value=3.7e-11 Score=118.09 Aligned_cols=183 Identities=12% Similarity=0.072 Sum_probs=121.7
Q ss_pred CCCccCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEcc-CCe
Q 014058 64 QNWINDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILP-GDK 140 (431)
Q Consensus 64 ~gw~NDPnG~i~~--~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~-dg~ 140 (431)
.+-+.||. +++. +|+|||++.-.-....+.....+.+++|+||+||++.+.++.... ...++|.+.++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCe
Confidence 35567999 6776 899999997643222221156799999999999999887652211 23568999988754 689
Q ss_pred EEEEEeeccCC---Cc--eeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC
Q 014058 141 PFILYTGIDAS---GQ--QVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID 215 (431)
Q Consensus 141 ~~l~YTg~~~~---~~--~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~ 215 (431)
++|+|+..... .. ..+..+.+.|. .+|++. .+++.. .....|+.++ +. +|+|||++....+
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt~Df-----~tft~p--~~~~~~-----~~~~ID~~v~-~~-~g~~Yl~~k~~~~ 157 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTTSDF-----VTFTEP--KVWIDL-----GANVIDTTVV-KV-GGTYYRFYKNEGS 157 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEecCcc-----cccCCC--eEeecC-----CCCeEeeEEE-Ee-CCEEEEEEecCCC
Confidence 99999986532 12 22333333353 688752 466642 1356799854 43 5999999975432
Q ss_pred CcceEEEEEeCCCC-CcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEee
Q 014058 216 NEGMAFVYWSWDFI-HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (431)
Q Consensus 216 ~~G~i~ly~S~Dl~-~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 280 (431)
+.|.+.+|++|. .|+...... .......|-|.+|+.+.. .+|+|+++.
T Consensus 158 --~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~ 206 (276)
T cd08983 158 --KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDN 206 (276)
T ss_pred --CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEE
Confidence 457788899986 687654321 122346899999999832 288888765
No 26
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.41 E-value=1.8e-12 Score=129.35 Aligned_cols=197 Identities=22% Similarity=0.326 Sum_probs=125.6
Q ss_pred cceEECCE--EEEEEEECCCCCCCCCcceEEEEEeCCCccceecc-cccCCCCccCCCCeEeecEEEccCCeEEEEEeec
Q 014058 72 GPMYYKGV--YHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (431)
Q Consensus 72 G~i~~~G~--YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 148 (431)
|++.++|. +||+|...-. ..+ ..+.|.|.|+|.+||+..+ ++|.|+..++..||....++.. +|+++|+||+.
T Consensus 36 gai~~~~~~R~~l~yr~~~~--~~~-~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~i-~d~yymtYta~ 111 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGS--DIG-SSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTKI-DDTYYMTYTAY 111 (312)
T ss_dssp EEEEETTE--EEEEEEEEES--SSS-EEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEEE-TTEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECC--CCc-eeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEEE-CCEEEEEEEEe
Confidence 56666666 8999876432 222 3489999999999999885 7899999999899999999875 89999999998
Q ss_pred cCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCC---CCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEe
Q 014058 149 DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS 225 (431)
Q Consensus 149 ~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~---~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S 225 (431)
+. ....+++|+|+|. .+|+|.. +++.... ......-+|-..+-...+|+|+|+.. .+.|.+.+|
T Consensus 112 ~~-~~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S 178 (312)
T PF04041_consen 112 SG-KGPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYS 178 (312)
T ss_dssp ES-SSEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEE
T ss_pred cC-CCcccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEec
Confidence 74 4567899999985 8999974 2222111 00011224544222224899999998 346789999
Q ss_pred CCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEee-CCCCeeeEEEee--ecC
Q 014058 226 WDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL-FSDKHDYYVLGT--YDP 295 (431)
Q Consensus 226 ~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~-~~~~~~~Y~vG~--~d~ 295 (431)
+|+++|+....++... ..+.||+ .+++. |.. +..-..-|++++.. .......|.+|- +|.
T Consensus 179 ~Dl~~W~~~~~~~~~~-~~~~~d~---~kiG~-g~p-----Pi~t~~GwL~iyHG~~~~~~~~Y~~g~~LlD~ 241 (312)
T PF04041_consen 179 PDLIHWGNHREPLLSP-RPGWWDS---SKIGA-GPP-----PIKTDEGWLLIYHGNVTDEGRVYRLGAALLDL 241 (312)
T ss_dssp SSSSSEEEEBETSB---STTSSCS---SEEEE--S------EEEETTEEEEEEEEEESSTTTEEEEEEEEE-S
T ss_pred CCcccccccccccccC-CCCcChh---hcccC-CCC-----ceEecCCEEEEEeccccCCCCEEEEEEEEEcC
Confidence 9999998765544432 3456776 34431 110 00001248877663 223445688886 454
No 27
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.41 E-value=2.2e-11 Score=121.72 Aligned_cols=186 Identities=16% Similarity=0.282 Sum_probs=123.3
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCC---------CCCCcceEEEEEeCCCccceecccccCCC--CccCCCCeEeecE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGP---------LFGDKMIWAHSVSYDLINWIHLSHALCPS--GPYDINSCWSGSV 133 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~---------~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~--~~~D~~gv~SGsa 133 (431)
.+.-||. ++.++|+|+||....-... .+. ...+-..+|+||++|+.++.++.|. ..+. .++|.+.+
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~-~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v 83 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYN-INDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSI 83 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccc-cCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCce
Confidence 4567999 6789999999987643221 122 3458889999999999999988743 2343 47899998
Q ss_pred EEccC----CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCCCC-CCccCCeEEEecCCCeEE
Q 014058 134 TILPG----DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVKD-DMFRDPTTAWQAPDGRWR 207 (431)
Q Consensus 134 v~~~d----g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p-~~~~~-~~~RDP~Vv~~~~~g~~~ 207 (431)
+.. + |+++|+|+.. ...+++|+|++.. ..|+...++|++... ++... ..-.||.++ .++||++|
T Consensus 84 ~~~-~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f-~DdDG~~Y 153 (311)
T cd09003 84 AVK-KINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVF-VDDDGQGY 153 (311)
T ss_pred EEe-ccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeE-ECCCCCEE
Confidence 864 6 9999999853 2457899998764 468865456777432 22111 123699964 45789999
Q ss_pred EEEeeeeC-----CcceEEEEE-eCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 208 VLVGGQID-----NEGMAFVYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 208 M~~ga~~~-----~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
|+++.... ..+.+.+.+ ++|+..-. ++... ......+|.|.+++.+ | +++|++|..
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~-i~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDDMISVD--GSAVT-IDAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCCceecc--CCceE-ccCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 99985321 123345555 45665432 32211 1123579999999987 6 788888754
No 28
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.33 E-value=3.2e-11 Score=116.98 Aligned_cols=137 Identities=23% Similarity=0.346 Sum_probs=97.4
Q ss_pred CCccCCCcceEEC-CEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccC-------CCCccCCCCeEeecEEEc
Q 014058 65 NWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC-------PSGPYDINSCWSGSVTIL 136 (431)
Q Consensus 65 gw~NDPnG~i~~~-G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~-------P~~~~D~~gv~SGsav~~ 136 (431)
+.+.||. +++.+ |+|||||...... ... ...+++|+|+|+++|+..+..+. +....+...+.++.++.+
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~-~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~ 140 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRP-KGA-VQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRD 140 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCC-CCC-cceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEE
Confidence 3466888 66777 9999999976532 222 67899999999999999876542 223334456788888876
Q ss_pred cC-CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 137 PG-DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 137 ~d-g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
++ |+++|+|++........+.+|.|+|+ .+|++....+ ....+.....+++|.++ + .+|+|+|++.+.
T Consensus 141 ~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 141 EEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDDGQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred CCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccCCcCccceEE-E-ECCEEEEEEEec
Confidence 43 89999999875445567889999885 7999864322 11222334678999964 4 369999999875
No 29
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.33 E-value=1.4e-10 Score=114.07 Aligned_cols=180 Identities=17% Similarity=0.182 Sum_probs=115.7
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCcc-------CCCCeEeecEEEccCCe
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-------DINSCWSGSVTILPGDK 140 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~-------D~~gv~SGsav~~~dg~ 140 (431)
.||. ++.++|+|+||... . .+..++|+||+||+.++.+|.+...+ ...++|.+.++. .+|+
T Consensus 1 ~DP~-vi~~~~~YY~~~T~------~----g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~ 68 (279)
T cd08988 1 HDPV-IIKEGDTWYVFGTG------P----GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGK 68 (279)
T ss_pred CCCE-EEEECCEEEEEEec------C----CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCE
Confidence 3898 78889999998652 1 37789999999999999888644322 235799999876 5899
Q ss_pred EEEEEeeccC-CCceeEEEEEecCCCCCcc-ceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcc
Q 014058 141 PFILYTGIDA-SGQQVQNLAMPENLSDPLL-KDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (431)
Q Consensus 141 ~~l~YTg~~~-~~~~~q~lA~S~D~~d~~l-~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G 218 (431)
++|||+.... .....+++|+|++...++- ..|++ ..+++..... ......||.++++ +||++||++++.. .|
T Consensus 69 yylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~D-dDG~~Yl~~g~~~--~g 142 (279)
T cd08988 69 FYLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIFD-QHGQPWLSFGSFW--GG 142 (279)
T ss_pred EEEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEEc-CCCCEEEEecccC--CC
Confidence 9999997643 2346778999988754431 12443 2466643211 1234579996544 7899999998632 22
Q ss_pred eEEEEE-eCCCCCcEEcccc--ccc-CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 219 MAFVYW-SWDFIHWTKLDHP--LYS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 219 ~i~ly~-S~Dl~~W~~~~~~--l~~-~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
|.+.+ ++|+..-...+.. +.. .......|-|-+++-+ | +++|+.|..
T Consensus 143 -i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 143 -IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred -EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 33333 4554432111111 111 1123468999999986 5 778877753
No 30
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.29 E-value=3e-10 Score=112.45 Aligned_cols=134 Identities=19% Similarity=0.187 Sum_probs=93.2
Q ss_pred CCccCCCcceEE--CCEEEEEEEECCCC-CCCCCcceEEEEEeCCCccceecccccCCCC-ccCCCCeEeecEEEccCCe
Q 014058 65 NWINDPNGPMYY--KGVYHLFYQYNPLG-PLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDK 140 (431)
Q Consensus 65 gw~NDPnG~i~~--~G~YHlFyq~~P~~-~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~-~~D~~gv~SGsav~~~dg~ 140 (431)
.++-||. ++++ +|+|+||....... ..+ ...+.+.+|+||+||+.++.++.+.. .+...++|.+.++. .+|+
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~--~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~-~~G~ 79 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGE--GTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHE-YKGR 79 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccC--CCcEEEEECCChhcccccceeeccCCCcCccccccCCeeee-eCCE
Confidence 4568998 7787 99999999754322 111 24589999999999999998886543 23346789999875 5999
Q ss_pred EEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 014058 141 PFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (431)
Q Consensus 141 ~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga 212 (431)
++|+|+..... ....+.+|+|++.. -.|+.....|+... .....||.+ |.++||++||+++.
T Consensus 80 yyly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~-----~~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 80 YYMFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE-----DWMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC-----CCceEcCce-EEcCCCCEEEEEEe
Confidence 99999865432 22346788887764 35775433344221 123579985 55578999999864
No 31
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.26 E-value=3.3e-10 Score=114.04 Aligned_cols=172 Identities=18% Similarity=0.234 Sum_probs=113.0
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecc-cccCCCC------------------ccCCC
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLS-HALCPSG------------------PYDIN 126 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~-~aL~P~~------------------~~D~~ 126 (431)
+..|. +++++|+|||||+..-....-......|.|+|++.. .|+++. ++|.|.. .+|..
T Consensus 112 vwaP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~ 190 (349)
T cd08992 112 VFTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSH 190 (349)
T ss_pred eECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccC
Confidence 34565 778999999999853211111103568888888876 698774 5566652 25666
Q ss_pred CeEeecEEEccCCeEEEEEeeccC-------CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEE
Q 014058 127 SCWSGSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAW 199 (431)
Q Consensus 127 gv~SGsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~ 199 (431)
++...+++. .+|+++|||+|+.. ...+.+++|+|+++. ..|+|.+.|||+... + ..+ ||
T Consensus 191 ~v~~P~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~~~nPi~~~~------~--~~~-~~ 256 (349)
T cd08992 191 KVHDPCLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKSPYNPITNSG------H--ETC-VW 256 (349)
T ss_pred ceECCEEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeCCCCcccCCC------C--ceE-EE
Confidence 777777655 59999999999752 135678999998875 468898889998422 2 236 68
Q ss_pred ecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEec
Q 014058 200 QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 200 ~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
.. .+.+-.++.....+.|. +..|+|+++|+....+...+...+..+|||-+.-+
T Consensus 257 ~~-~~~~~~~~~~d~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 257 QY-KGGIAAMLTTDGPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred ec-CCceEEEEeccCCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 84 45673444443333454 67899999999766433333344566677666554
No 32
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.18 E-value=1.8e-09 Score=105.60 Aligned_cols=173 Identities=18% Similarity=0.198 Sum_probs=112.0
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCcc------CCCCeEeecEEEccC
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY------DINSCWSGSVTILPG 138 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~------D~~gv~SGsav~~~d 138 (431)
+..-||. +++++|+|+||+..... ...+...+|+||+||+..+.++...... ...++|.+.++. .+
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~------~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW------FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YD 77 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc------CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-EC
Confidence 4567999 88999999999753211 1236778999999999998877543211 235799999876 59
Q ss_pred CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcc
Q 014058 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (431)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G 218 (431)
|+++|+|+.........+++|++++..+ .|+. |+... ....||.++ .++||+.||+.+.. +
T Consensus 78 G~yy~yy~~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~------~~~IDp~~f-~D~dG~~Yl~~~~~----~ 138 (269)
T cd08989 78 GKFWLIYTAVKVWKDCHNYLFTAEDITG----PWSR----PIFLN------YGGFDPSLF-HDDDGKKYLINMGW----S 138 (269)
T ss_pred CEEEEEEeccccCCCceEEEEEECCCCC----CCcC----CEECC------CCcccCceE-EcCCCCEEEEecCC----C
Confidence 9999999976433445678999877643 4653 44321 134799964 44799999998752 2
Q ss_pred eEEEEE-eCCCCCcEEcccc----cccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 219 MAFVYW-SWDFIHWTKLDHP----LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 219 ~i~ly~-S~Dl~~W~~~~~~----l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
.|.+.+ +.|+..= .+.+ +.........|-|.+++.+ | +++|++|..
T Consensus 139 ~i~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~ 189 (269)
T cd08989 139 GIRLQEYSPAEKKL--IGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEG 189 (269)
T ss_pred cEEEEEEChhhCCC--CCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeC
Confidence 233433 2332211 1111 1111223468999999876 5 788888764
No 33
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.17 E-value=1.3e-09 Score=106.61 Aligned_cols=169 Identities=14% Similarity=0.094 Sum_probs=111.6
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc-----------cCCCCeEeecE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-----------YDINSCWSGSV 133 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~-----------~D~~gv~SGsa 133 (431)
+..-||. +++++|+|+||.... .+ ...+..++|+||+||+.++.++.+... .-..++|.+.+
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~----~~--~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v 81 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTM----HY--SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSL 81 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCc----cc--CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCce
Confidence 4557999 788999999997532 11 124678899999999999877643221 11247899998
Q ss_pred EEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 134 TILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 134 v~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
+.. +|+++|+|+... ..+.+|+|++.. ..|+.. .++. ...||.++ .+++|+.||+++..
T Consensus 82 ~~~-~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~~---------~~iDp~~f-~D~dG~~Yl~~~~~ 140 (269)
T cd09001 82 RYH-NGTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALDG---------GYHDPSLL-FDDDGTAYLVYGGG 140 (269)
T ss_pred EEE-CCEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcCC---------CcccCceE-EcCCCCEEEEeCCC
Confidence 764 999999999752 346788887753 356542 1111 34699964 44789999999753
Q ss_pred eCCcceEEEEE-eCCCCCcEEcccccccCC--CCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 214 IDNEGMAFVYW-SWDFIHWTKLDHPLYSVQ--ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 214 ~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~--~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
.+.+.+ ++|+....-....+.... .....|-|.+++-+ | +++|++|..
T Consensus 141 -----~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~ 191 (269)
T cd09001 141 -----TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAW 191 (269)
T ss_pred -----cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecC
Confidence 233444 667666521111122211 13578999999876 5 788888864
No 34
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.14 E-value=2.2e-09 Score=105.10 Aligned_cols=179 Identities=17% Similarity=0.148 Sum_probs=112.3
Q ss_pred CccCCCcceEE-CCEEEEEEEECCCCC----CCCCcceEEEEEeCCCccceecccccCCCCc------------cCCCCe
Q 014058 66 WINDPNGPMYY-KGVYHLFYQYNPLGP----LFGDKMIWAHSVSYDLINWIHLSHALCPSGP------------YDINSC 128 (431)
Q Consensus 66 w~NDPnG~i~~-~G~YHlFyq~~P~~~----~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~------------~D~~gv 128 (431)
||-||. ++.. +|+|+|+......+. .|........++|+||+||+.++.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 678999 5665 679999987542211 1110245778999999999999888754321 124578
Q ss_pred EeecEEEccCCeEEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCC-cEEcCCCCCCCCCccCCeEEEecCCCeE
Q 014058 129 WSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGN-PVMTPPNGVKDDMFRDPTTAWQAPDGRW 206 (431)
Q Consensus 129 ~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~-Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~ 206 (431)
|.+.+.. .+|+++|+|+..... ....+++|++++.. ..|+..... ++ ..-.||.+ |.++||++
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~-f~D~DG~~ 144 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSL-FEDDDGKV 144 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCce-EEcCCCCE
Confidence 9998876 589999999976432 34556778777653 357654221 11 13469995 55578999
Q ss_pred EEEEeeeeCCcceEEEEEeCCCCCcEEcccccccC----CCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 207 RVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV----QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 207 ~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~----~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
||+++.. .+ .--++|+....-....+... ......|-|.+++.+ | +++|++|..
T Consensus 145 Yl~~~~~-----~i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 145 YLVWHNT-----LI-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred EEEeeCC-----ce-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 9998753 11 12255665443111111111 112357999999976 5 888888763
No 35
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.12 E-value=1.3e-09 Score=106.39 Aligned_cols=98 Identities=17% Similarity=0.225 Sum_probs=75.5
Q ss_pred ecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcC--CCCCCCCCccCCeEEEecCCCeEEE
Q 014058 131 GSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP--PNGVKDDMFRDPTTAWQAPDGRWRV 208 (431)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~--p~~~~~~~~RDP~Vv~~~~~g~~~M 208 (431)
..++. .||+++|+|++...+....+++|+|+|+ .+|++.+ +|++.+ ...++...++||.|+. .+|+|+|
T Consensus 3 P~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~~--~~g~y~m 73 (268)
T cd08993 3 PAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIVK--IDDTYYI 73 (268)
T ss_pred CeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEEE--ECCEEEE
Confidence 44555 5999999999876556778999999996 7999875 565533 2334567899999754 4889999
Q ss_pred EEeeee--CCcceEEEEEeCCCCCcEEcccc
Q 014058 209 LVGGQI--DNEGMAFVYWSWDFIHWTKLDHP 237 (431)
Q Consensus 209 ~~ga~~--~~~G~i~ly~S~Dl~~W~~~~~~ 237 (431)
++++.. ....++.+++|+|+.+|++.+.+
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 998865 34567899999999999988653
No 36
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.12 E-value=6.4e-09 Score=102.50 Aligned_cols=188 Identities=15% Similarity=0.132 Sum_probs=118.0
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceeccccc--CCCC-ccCCCCeEeecEEEccCCeEEEEE
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSG-PYDINSCWSGSVTILPGDKPFILY 145 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL--~P~~-~~D~~gv~SGsav~~~dg~~~l~Y 145 (431)
||. ++.++++|+|++.-.. .....++|+||++|+.....+ .+.. .....++|.+.++. .+|+++|+|
T Consensus 2 DP~-v~~~~d~yY~~~T~~~--------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyy 71 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE--------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYF 71 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC--------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEE
Confidence 898 7888999999986421 247889999999999875432 2322 12346799999876 599999999
Q ss_pred eeccC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC---CcceE
Q 014058 146 TGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---NEGMA 220 (431)
Q Consensus 146 Tg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~---~~G~i 220 (431)
+.... ...+.+++|.+++..++ +..|+.. .+++.... ..--||.++ .+ +|++||+++.... ....+
T Consensus 72 s~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~~----~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i 142 (288)
T cd08980 72 AAGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPTD----RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNL 142 (288)
T ss_pred EccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCCC----CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccE
Confidence 97653 24456778887652112 3578864 24432111 233699964 43 5999999975431 12335
Q ss_pred EEEEeCCCCCcEEcccc--cccCCC------CCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEEEee
Q 014058 221 FVYWSWDFIHWTKLDHP--LYSVQE------TGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (431)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~--l~~~~~------~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 292 (431)
.+.+.++...+. +++ +..... ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 143 ~~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 143 YIAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 555655443443 321 221111 1457999999997 5 78888887543345566654
No 37
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=99.05 E-value=9.6e-09 Score=101.17 Aligned_cols=120 Identities=18% Similarity=0.256 Sum_probs=84.9
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEe
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYT 146 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YT 146 (431)
.-||. +++++|+|+|+.... .+ ...+...+|+||+||+.++.++.+. ..++|.+.++. .+|+++|+|+
T Consensus 15 ~~DP~-i~~~~~~yY~~~t~~----~~--~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yys 82 (280)
T cd09002 15 YPDPS-ILRDGEDYYMTHSSF----KY--TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYFP 82 (280)
T ss_pred CCCCE-EEEECCEEEEEEcch----hc--CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEEE
Confidence 45998 888999999976421 11 2357888999999999998877542 35789998865 6999999999
Q ss_pred eccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 014058 147 GIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (431)
Q Consensus 147 g~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga 212 (431)
.........+.+|++.+.. ..|++ |+... ....-||.|++. ++|++||+++.
T Consensus 83 ~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~D-ddG~~Yl~~~~ 134 (280)
T cd09002 83 AIPEGGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVVD-EDGNRYLFLSG 134 (280)
T ss_pred eecCCCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEEc-CCCCEEEEECC
Confidence 8654445667889887654 35654 23111 112359996554 78999999864
No 38
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.97 E-value=3.4e-08 Score=96.27 Aligned_cols=203 Identities=16% Similarity=0.318 Sum_probs=127.5
Q ss_pred eecCCCC---ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccC---CCCccCCCCeEeecE
Q 014058 60 FRPPQNW---INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC---PSGPYDINSCWSGSV 133 (431)
Q Consensus 60 ~~p~~gw---~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~---P~~~~D~~gv~SGsa 133 (431)
.+|..|| +.||- +++++|+||+|-..+. ...|+ -...| |++|+.++.|+. .... ...+.|.+.+
T Consensus 14 ~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~-~~~~~-----s~~~S--f~~Ws~~g~A~q~~l~~~~-~~~~fwAPqV 83 (303)
T cd08987 14 ISPKSDWIVAIKDPT-VVYYNGRYHVYATTAD-AGNYG-----SMYFN--FTDWSQAASATQYYLQNGN-MTGYRVAPQV 83 (303)
T ss_pred ccCCCCCeeeecCCe-EEEECCEEEEEEccCC-CCCce-----eeeec--ccCHhHhccchhhcccCCC-CCcccccCEE
Confidence 3566788 68998 6788999999976543 11221 23555 999999987662 1111 2345788887
Q ss_pred EE-ccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 014058 134 TI-LPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (431)
Q Consensus 134 v~-~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga 212 (431)
+. .++++++|+|+. . ..++|+|+|..+|+ .|... .|++...........-|+.||- .+++.||+.+.
T Consensus 84 fyf~pk~kwYL~Yq~-~-----~~~yaTs~dp~~P~--~ws~~--qpl~~~~~~~~~~~~ID~~vI~--Dd~~~YLff~~ 151 (303)
T cd08987 84 FYFAPQNKWYLIYQW-W-----PAAYSTNSDISNPN--GWSAP--QPLFSGTPNGSPGGWIDFWVIC--DDTNCYLFFSD 151 (303)
T ss_pred eeeccCCEEEEEEec-C-----ceEEEeCCCCCCCC--ccCCC--cccccCcccCCCCCccceeEEe--CCCCEEEEEec
Confidence 62 368999999994 1 24588999988774 67753 5776432212234567999753 47888888854
Q ss_pred eeCCcceEEEEEeC-CCCCcEEc-cc---ccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeee
Q 014058 213 QIDNEGMAFVYWSW-DFIHWTKL-DH---PLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDY 287 (431)
Q Consensus 213 ~~~~~G~i~ly~S~-Dl~~W~~~-~~---~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~ 287 (431)
. .| .||+|+ .+.+.... +. .+.........|-|+++++. | ..+++|+++..+..+..
T Consensus 152 d---nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G-----------~~~YlmiveA~g~~~~r 213 (303)
T cd08987 152 D---NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--G-----------QNQYLLIVEAIGSDGGR 213 (303)
T ss_pred C---CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--C-----------CeEEEEEEEecCCCCCC
Confidence 3 34 478763 22222110 11 11112234679999999998 5 23899999987654556
Q ss_pred EEEeeecCC--CCeeecC
Q 014058 288 YVLGTYDPQ--MDIFSPD 303 (431)
Q Consensus 288 Y~vG~~d~~--~~~f~p~ 303 (431)
|+++ +..+ .+.|+|.
T Consensus 214 Yfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 214 YFRS-WTATSLDGPWTPL 230 (303)
T ss_pred eEEE-EEcCCCCCCceec
Confidence 8888 4432 3455554
No 39
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.90 E-value=8.3e-08 Score=95.27 Aligned_cols=171 Identities=18% Similarity=0.200 Sum_probs=102.1
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEee
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTG 147 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 147 (431)
-||. +++++|+|+|+-... + +..+|+||++|+..+.++. ..++|.+++.. .+|+++++|+.
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~------~-----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS------G-----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC------C-----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 5998 788899999885431 1 3579999999999987763 45789999876 58886665553
Q ss_pred ccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEE---
Q 014058 148 IDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW--- 224 (431)
Q Consensus 148 ~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~--- 224 (431)
. .+.+|+|.|...+ .|+.. .+. ......||.|+ .++||+.||++|.... .+ |.+.+
T Consensus 65 ~------~~~v~~s~~p~gp---~w~~~--~~~-------~~~~~IDp~vf-~DdDGk~Yl~~g~~~~-~~-i~~~eL~~ 123 (295)
T cd08982 65 Y------NSRIYKTADPLSG---PWEEV--DKS-------FPPGLADPALF-IDDDGRLYLYYGCSNN-YP-LRGVEVDP 123 (295)
T ss_pred C------CceEEEeCCCCCC---Ccccc--ccc-------cCCCccCCceE-ECCCCCEEEEEecCCC-CC-eEEEEECc
Confidence 2 2347888775321 35432 010 11245699965 4468999999975321 11 11111
Q ss_pred ---------------eCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEE
Q 014058 225 ---------------SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYV 289 (431)
Q Consensus 225 ---------------S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~ 289 (431)
+..-..|+..+.-.......+..|-|.+++.+ | +++|++|........|.
T Consensus 124 d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~Y~ 188 (295)
T cd08982 124 DTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNTYA 188 (295)
T ss_pred ccCCccCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCcEe
Confidence 22223455433211101123457888888865 5 78888876443333455
Q ss_pred Eeee
Q 014058 290 LGTY 293 (431)
Q Consensus 290 vG~~ 293 (431)
+|-.
T Consensus 189 v~~a 192 (295)
T cd08982 189 DGVY 192 (295)
T ss_pred EEEE
Confidence 5543
No 40
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.90 E-value=4.3e-08 Score=95.37 Aligned_cols=146 Identities=20% Similarity=0.302 Sum_probs=109.4
Q ss_pred cceEECCEEEEEEEE------CCCCCCCCCcceEEEEEeCCCcc-ceecc-cccCC-CCccCCCCeEeecEEEccCCeEE
Q 014058 72 GPMYYKGVYHLFYQY------NPLGPLFGDKMIWAHSVSYDLIN-WIHLS-HALCP-SGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 72 G~i~~~G~YHlFyq~------~P~~~~wg~~~~WgHa~S~Dlv~-W~~~~-~aL~P-~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
++++.++++||+|+- .+. . ..|.+-|.|+|+++ |+.++ +.+.| ..+++..||..+.++.. |++++
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~----~-~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~I-~~~y~ 108 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHS----S-ISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTKI-GGRYY 108 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCc----c-ceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEEE-CCEEE
Confidence 578899999999997 222 2 57899999999999 98885 78889 55778889999999875 99999
Q ss_pred EEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC---Ccce
Q 014058 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---NEGM 219 (431)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~---~~G~ 219 (431)
|.|||.+ +..+..++|+++|. .+|+|.+ +++.+ +.||-.++=...+|+|.|+---... ..+-
T Consensus 109 mtYTa~s-~~g~~~~la~t~~f-----~n~~rig--~i~~p-------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~n 173 (314)
T COG2152 109 MTYTAYS-DKGPRLALAVTKDF-----LNWERIG--AIFPP-------DNKDAALFPKKINGKYALLHRPVLGEYGMKGN 173 (314)
T ss_pred EEEEecC-CCCcccchhhhhhh-----hhhhhcc--cccCC-------CCCCceEeeEEecCcEEEEEeecccccCccCc
Confidence 9999985 46778889999885 6899863 34332 2344442212247889888653332 2467
Q ss_pred EEEEEeCCCCCcEEccccc
Q 014058 220 AFVYWSWDFIHWTKLDHPL 238 (431)
Q Consensus 220 i~ly~S~Dl~~W~~~~~~l 238 (431)
|.+..|+|+.+|.....++
T Consensus 174 iwia~S~dl~~w~~~~~~l 192 (314)
T COG2152 174 IWIAFSPDLEHWGIHRKLL 192 (314)
T ss_pred eEEEEcCCccCCCccceee
Confidence 8999999999998764444
No 41
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.89 E-value=1e-07 Score=97.44 Aligned_cols=193 Identities=18% Similarity=0.167 Sum_probs=117.9
Q ss_pred CCCcceE-ECCEEEEEEEECCCC----CCCCCcceEEEEEeCCCc----cceecccccCCCCcc-CCCCeEeecEEEcc-
Q 014058 69 DPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLI----NWIHLSHALCPSGPY-DINSCWSGSVTILP- 137 (431)
Q Consensus 69 DPnG~i~-~~G~YHlFyq~~P~~----~~wg~~~~WgHa~S~Dlv----~W~~~~~aL~P~~~~-D~~gv~SGsav~~~- 137 (431)
|+.|-+. ++|.--+|-+-.|.. ..++ ..|+++.-|++.. +|+..+.++...... ...--|||||++..
T Consensus 64 d~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~-~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~ 142 (428)
T PF02435_consen 64 DADGNVVNYNGYQVVFALTADRHEDPDDRHD-DARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNND 142 (428)
T ss_dssp -TTSSBEEBTTEEEEEEEEE-TT--GGGCSC-GEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTT
T ss_pred cccccEEEECCEEEEEEEecCCccCCccccC-CcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCC
Confidence 4555443 588555666665543 2455 7899999999998 999999877555431 22456999999987
Q ss_pred CCeEEEEEeeccC----CCceeEE-----EEEecCCCCCccceeeeecCCcEEcCCCCCC-------CCCccCCeEEEec
Q 014058 138 GDKPFILYTGIDA----SGQQVQN-----LAMPENLSDPLLKDWVKFSGNPVMTPPNGVK-------DDMFRDPTTAWQA 201 (431)
Q Consensus 138 dg~~~l~YTg~~~----~~~~~q~-----lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~-------~~~~RDP~Vv~~~ 201 (431)
||++.||||.... ...|+.. ++...+. .-.+..|++. ..++.++..++ ...||||++|-..
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP 219 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFEGDGKHYQTYEQNPGYAFRDPHVFEDP 219 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES--SSSB--HHHHHH---EEEEEEEET
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeeccchhhhhChhhcCCccccCCeeEECC
Confidence 8999999998643 1223322 2233332 2223445543 34555332221 2579999965443
Q ss_pred CCCeEEEEEeeee---C------------------------------CcceEEEEEeCC--CCCcEEcccccccCCCCCc
Q 014058 202 PDGRWRVLVGGQI---D------------------------------NEGMAFVYWSWD--FIHWTKLDHPLYSVQETGM 246 (431)
Q Consensus 202 ~~g~~~M~~ga~~---~------------------------------~~G~i~ly~S~D--l~~W~~~~~~l~~~~~~~~ 246 (431)
++|+-||+.-+.. + ..|+|.|.+.+| +..|+...+++.+..-...
T Consensus 220 ~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~de 299 (428)
T PF02435_consen 220 EDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVNDE 299 (428)
T ss_dssp TTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS-
T ss_pred CCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceeccccccc
Confidence 7899999885432 0 146788888754 4679998755554444568
Q ss_pred eeeCcEEEeccCCccceecccCCCCeeeEEEEee
Q 014058 247 WECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (431)
Q Consensus 247 wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 280 (431)
.|-|+++.++ | ||+|+.+.
T Consensus 300 ~ERP~iv~~~--g-------------kyYLFt~s 318 (428)
T PF02435_consen 300 LERPHIVFMN--G-------------KYYLFTIS 318 (428)
T ss_dssp EEEEEEEEET--T-------------EEEEEEEE
T ss_pred ccCCcEEEEC--C-------------EEEEEEEe
Confidence 9999999998 6 88887554
No 42
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.71 E-value=4.8e-07 Score=88.68 Aligned_cols=132 Identities=20% Similarity=0.220 Sum_probs=86.7
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecc--cccCCCCccCCCCeEeecEEEcc-CCeEEEE
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS--HALCPSGPYDINSCWSGSVTILP-GDKPFIL 144 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~--~aL~P~~~~D~~gv~SGsav~~~-dg~~~l~ 144 (431)
-.|. +++.+|+|||||..+... ... ....++|+|+|+++|++.+ +.+.+...++...+-.+.++.++ +|+++|+
T Consensus 63 ~sgs-~~~~~g~~~l~YTg~~~~-~~~-~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~ 139 (280)
T cd08995 63 GTGS-VIKGEGTYHAFYTGHNLD-GKP-KQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWML 139 (280)
T ss_pred eEeE-EEeeCCEEEEEEEEECCC-CCC-cEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEE
Confidence 3455 567899999999875422 112 4679999999999999875 33432222333334466776653 5899999
Q ss_pred EeeccC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 145 YTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 145 YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
|.+... .....+.++.|+|. ++|+.. .+++.+.. ...+.-|.+ ++ .+|+|+|+++.+.
T Consensus 140 ~g~~~~~~~~~~~g~i~~~~S~Dl-----~~W~~~--~~~~~~~~---~~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 140 LATRLLDGPYNRRGCIALFTSKDL-----KNWEYE--EPFYAPGL---YFMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred EEeccCCCCCCCCeEEEEEEeCCc-----Ccceec--CceecCCC---cceeecceE-EE-ECCEEEEEEEecc
Confidence 986542 23445667788774 799875 45654322 234678885 44 5899999998754
No 43
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.71 E-value=1.3e-07 Score=93.17 Aligned_cols=108 Identities=22% Similarity=0.287 Sum_probs=81.2
Q ss_pred cCCCcceEECCEEEEEEEECCCCC----CCCCcceEEEEEeCCC-cccee-cccccCCCCc-cCCCCeEeecEEEccCCe
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGP----LFGDKMIWAHSVSYDL-INWIH-LSHALCPSGP-YDINSCWSGSVTILPGDK 140 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~----~wg~~~~WgHa~S~Dl-v~W~~-~~~aL~P~~~-~D~~gv~SGsav~~~dg~ 140 (431)
-+|. +++++|+|+|||....... ..+ ...+|.|+|+|+ -+|++ ..++|.|... +|..++..++++...+|+
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~-~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~ 158 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRN-NQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGS 158 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCC-CceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCC
Confidence 4676 6788999999999764311 122 568999999994 69998 4567777643 577788999988755899
Q ss_pred EEEEEeeccCC---CceeEEEEEecCCCCCccceeeeecCCcEE
Q 014058 141 PFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVM 181 (431)
Q Consensus 141 ~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi 181 (431)
++|+|+|.... ..+.+++|+|+|.. .+|+|....|++
T Consensus 159 ~~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 159 YLLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 99999998642 45788999998863 479987655654
No 44
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.66 E-value=1.2e-06 Score=85.85 Aligned_cols=155 Identities=12% Similarity=0.141 Sum_probs=98.1
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceeccccc-C-CCCccCCCCeEeecEEEccCCeEEE
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHAL-C-PSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL-~-P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
+..|. +++.+|+|||||..+-.+ .. ...+++|+|+|.. .|+..+..+ . +. +..+....++++++||+++|
T Consensus 62 ~waP~-v~~~~g~y~~~y~~~~~~--~~-~~~i~~a~s~~p~g~~~~~~~~~~~~~~---~~~~~~Dp~v~~d~dG~~Yl 134 (287)
T cd08999 62 FWAPD-VSYVNGKYVLYYSARDKG--SG-GQCIGVATADSPLGPFTDHGKPPLCCPE---GEGGAIDPSFFTDTDGKRYL 134 (287)
T ss_pred ccCce-EEEECCEEEEEEEeecCC--CC-CEEEEEEECCCCCCCCccCCcceEecCC---CCCCccCCCeEECCCCCEEE
Confidence 45666 788999999999876433 22 5679999999965 899875332 2 22 22345678888877899999
Q ss_pred EEeeccCC--CceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee--CC--
Q 014058 144 LYTGIDAS--GQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI--DN-- 216 (431)
Q Consensus 144 ~YTg~~~~--~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~--~~-- 216 (431)
+|.+.... ..+.+.++ .+.|+ .+|.... ..++.+...+....+.-|.++ + .+|+|||++.+.. ..
T Consensus 135 ~~~~~~~~~~~~~~i~~~~ls~d~-----~~~~~~~-~~i~~~~~~~~~~~~EgP~i~-k-~~g~yyl~~S~~~~~~~~~ 206 (287)
T cd08999 135 VWKSDGNSIGKPTPIYLQELSADG-----LTLTGEP-VRLLRNDEDWEGPLVEAPYLV-K-RGGYYYLFYSAGGCCSGAS 206 (287)
T ss_pred EEeccCCCCCCCceEEEEEeCCCC-----ccccCCc-EeeecccccccCCceEeeEEE-E-ECCEEEEEEEcCCccCCCC
Confidence 99764321 12223343 45553 5665321 233333222333456789854 5 4899999998753 11
Q ss_pred cceEEEEEeCCCC-CcEEccc
Q 014058 217 EGMAFVYWSWDFI-HWTKLDH 236 (431)
Q Consensus 217 ~G~i~ly~S~Dl~-~W~~~~~ 236 (431)
.=.+.+++|+++. .|+....
T Consensus 207 ~y~i~~~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 207 TYAVGVARSKSLLGPYVKAPG 227 (287)
T ss_pred CEEEEEEEeCCCcCCcCCCCC
Confidence 2256788999987 8887543
No 45
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.64 E-value=4.4e-06 Score=82.37 Aligned_cols=155 Identities=15% Similarity=0.134 Sum_probs=94.0
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeEEE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
..+..|. +++.+|+|||||...... -. ....++|+|+|.. .|+..+..+.+.. .....++++.++||+++|
T Consensus 53 ~~~waP~-v~~~~g~yyl~ys~~~~~--~~-~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl 124 (294)
T cd08991 53 RGFWAPE-VYYYNGKFYMYYSANDRD--EK-TEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYL 124 (294)
T ss_pred CcEEccE-EEEECCEEEEEEEeccCC--CC-cceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEE
Confidence 3455787 889999999999876432 12 5778999999986 7887754333321 234578888887799999
Q ss_pred EEeeccCCC--ceeEEEEEecCCCCCccceeeeecC---CcEEcC-------C-C---CCCCCCccCCeEEEecCCCeEE
Q 014058 144 LYTGIDASG--QQVQNLAMPENLSDPLLKDWVKFSG---NPVMTP-------P-N---GVKDDMFRDPTTAWQAPDGRWR 207 (431)
Q Consensus 144 ~YTg~~~~~--~~~q~lA~S~D~~d~~l~~w~k~~~---~Pvi~~-------p-~---~~~~~~~RDP~Vv~~~~~g~~~ 207 (431)
+|+...... ......+.+.|. .+|..... .++..+ + . ..+.....-|.++ + .+|+||
T Consensus 125 ~~~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~-k-~~g~yy 197 (294)
T cd08991 125 YYSRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVL-K-HNGRYY 197 (294)
T ss_pred EEEecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEEE-E-ECCEEE
Confidence 998654321 233444566654 34432111 111111 0 0 0112235678754 4 478999
Q ss_pred EEEeeeeC--CcceEEEEEeCCC-CCcEEc
Q 014058 208 VLVGGQID--NEGMAFVYWSWDF-IHWTKL 234 (431)
Q Consensus 208 M~~ga~~~--~~G~i~ly~S~Dl-~~W~~~ 234 (431)
|++.+..- ..-.+.+++|+++ -.|+..
T Consensus 198 l~ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 198 LTYSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EEEECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 99976431 1114667788874 689874
No 46
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.64 E-value=4.9e-07 Score=88.89 Aligned_cols=89 Identities=22% Similarity=0.331 Sum_probs=63.5
Q ss_pred CCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-----CCcceEEEEEeCCCCCcEEcccccccC-CCCCceeeC
Q 014058 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNEGMAFVYWSWDFIHWTKLDHPLYSV-QETGMWECP 250 (431)
Q Consensus 177 ~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-----~~~G~i~ly~S~Dl~~W~~~~~~l~~~-~~~~~wECP 250 (431)
++||+.+.. ....+|||+|++..++|+|||+..... .....|.+++|+||.+|+..+..+... ..+.+| +|
T Consensus 5 ~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-AP 81 (276)
T cd08983 5 GNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-AP 81 (276)
T ss_pred CceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-Cc
Confidence 689997543 357899999776546889999886542 122358899999999999876543222 234467 99
Q ss_pred cEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 251 DIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 251 dlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
++|..+..| +|+|.+|..
T Consensus 82 ev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 82 EAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred cceEcCCCC-------------eEEEEEecc
Confidence 999987434 788887764
No 47
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.63 E-value=3.6e-06 Score=82.34 Aligned_cols=153 Identities=12% Similarity=0.040 Sum_probs=96.2
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecccc-cCCCCccCCCCeEeecEEEccCCeE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHA-LCPSGPYDINSCWSGSVTILPGDKP 141 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~a-L~P~~~~D~~gv~SGsav~~~dg~~ 141 (431)
.+-+..|. +++++|+|||||..... -+ ....++|+|+|.. .|+..... +.+ ...+......+++++++||++
T Consensus 61 ~~~~wAP~-i~~~~g~yy~yy~~~~~---~~-~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~ 134 (274)
T cd08990 61 KGQAWAPD-VVEKNGKYYLYFPARDK---DG-GFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQA 134 (274)
T ss_pred cCCcCcCe-EEEECCEEEEEEEeecC---CC-ceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCE
Confidence 34456777 78999999999987643 12 5679999999976 79987643 322 222234456788888778999
Q ss_pred EEEEeeccCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCC---CCCCCCCccCCeEEEecCCCeEEEEEeeeeCCc
Q 014058 142 FILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPP---NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (431)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p---~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~ 217 (431)
+|+|.+. +.+.++ .+.|. .+|+.. ..++..+ .......+.-|.+ ++ .+|+|||++++.. .
T Consensus 135 yl~~~~~-----~~~~~~~l~~d~-----~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~ 198 (274)
T cd08990 135 YLYWGGG-----LGLRVAKLKPDM-----LSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--P 198 (274)
T ss_pred EEEECCc-----CCEEEEEeCccc-----cccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--C
Confidence 9999864 223344 34443 566532 1233211 1111223457885 45 4899999998753 3
Q ss_pred ceEEEEEeCCCC-CcEEccccc
Q 014058 218 GMAFVYWSWDFI-HWTKLDHPL 238 (431)
Q Consensus 218 G~i~ly~S~Dl~-~W~~~~~~l 238 (431)
..+.+.+|+++. .|+..+.++
T Consensus 199 ~~~~~a~s~~p~GP~~~~g~~~ 220 (274)
T cd08990 199 EEIAYATSDSPLGPFTYRGVIL 220 (274)
T ss_pred cEEEEEEcCCCCCCcccCcEEe
Confidence 456677888775 577655443
No 48
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.61 E-value=1.8e-06 Score=83.35 Aligned_cols=156 Identities=15% Similarity=0.140 Sum_probs=97.7
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
.+-+.+|. +++.+|+|+|||.....+ .. ....+.|+|+|+.+|....... +.. ....++..++++.++||+++|
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~-~~~i~~a~s~d~~g~~~~~~~~-~~~-~~~~~~iDp~vf~d~dg~~yl 129 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YN-GSGIGVATSEDPTGPFEDKVIR-PPT-SNNGNSIDPTVFKDDDGKYYL 129 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CC-cccEEEEECCCCCCCccccccC-cCc-cCCCCccCcceEEcCCCCEEE
Confidence 45677898 889999999999987542 22 5679999999999987653211 111 123456789998876799999
Q ss_pred EEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC--CcceE
Q 014058 144 LYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMA 220 (431)
Q Consensus 144 ~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~--~~G~i 220 (431)
+|.+.... ....+.++.+++.. .+.. ..+++..........+..|.+ ++ .+|+|||++.+... ..-.+
T Consensus 130 ~~~~~~~~~~~~~i~~~~l~~~~-----~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~ 200 (271)
T cd08978 130 YYGSGDPGAGFGGIYISELTDDL-----TKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNI 200 (271)
T ss_pred EEecccCCCCCCcEEEEEECccc-----cccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceE
Confidence 99875321 23345566555431 2222 223321111112235678995 45 47999999976532 23356
Q ss_pred EEEEeCCCC-CcEEc
Q 014058 221 FVYWSWDFI-HWTKL 234 (431)
Q Consensus 221 ~ly~S~Dl~-~W~~~ 234 (431)
.+++|++.. .|+..
T Consensus 201 ~~~~s~~~~Gp~~~~ 215 (271)
T cd08978 201 GYATSDSIDGPYVKK 215 (271)
T ss_pred EEEECCCCCCCcCcC
Confidence 788888764 46554
No 49
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.61 E-value=6.4e-07 Score=89.63 Aligned_cols=104 Identities=14% Similarity=0.194 Sum_probs=79.3
Q ss_pred CCCeEeecEEEccCCe--EEEEEeeccCCCce-eEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEec
Q 014058 125 INSCWSGSVTILPGDK--PFILYTGIDASGQQ-VQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA 201 (431)
Q Consensus 125 ~~gv~SGsav~~~dg~--~~l~YTg~~~~~~~-~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~ 201 (431)
...+|-+.|++. +|+ ++++|.+....... .+++|.|+|+ .+|++. .+||+.+...++.....||-|+..
T Consensus 29 ~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 29 PNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp SSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred cceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 457999999865 555 89988876654444 8999999997 689886 479997655566677899998765
Q ss_pred CCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccc
Q 014058 202 PDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHP 237 (431)
Q Consensus 202 ~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 237 (431)
+++|||++.+......++.+.+|+|+++|+..+..
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~ 135 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKI 135 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECT
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEeccc
Confidence 68999999887765667889999999999998753
No 50
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.49 E-value=5.2e-06 Score=80.41 Aligned_cols=157 Identities=13% Similarity=0.102 Sum_probs=99.9
Q ss_pred CCccCCCcceEEC-CEEEEEEEECCCCCCCCCcceEEEEEeCCCcc-ceecc-cccCCCC--ccCCCCeEeecEEEccCC
Q 014058 65 NWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN-WIHLS-HALCPSG--PYDINSCWSGSVTILPGD 139 (431)
Q Consensus 65 gw~NDPnG~i~~~-G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~-W~~~~-~aL~P~~--~~D~~gv~SGsav~~~dg 139 (431)
+-+..|. +++.+ |+|+|||..... ..+ ....+.|+|+|+.. |++.. ..+.+.. ..+...+..++++.++||
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~-~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG 133 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKN-QQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDG 133 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCC-ceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCC
Confidence 3456777 67777 999999987643 123 56799999999975 56542 1122221 123345678888887669
Q ss_pred eEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC----
Q 014058 140 KPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---- 215 (431)
Q Consensus 140 ~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~---- 215 (431)
+++|+|.+........+.+|.|+|. .+|++....+++.... ....+.-|.++ + .+|+|||++.+...
T Consensus 134 ~~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~ 204 (286)
T cd08772 134 KWYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVD 204 (286)
T ss_pred CEEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCC
Confidence 9999998764333456788988885 5787653222222211 23467789964 4 47999999987541
Q ss_pred CcceEEEEEeCC-CCCcEEc
Q 014058 216 NEGMAFVYWSWD-FIHWTKL 234 (431)
Q Consensus 216 ~~G~i~ly~S~D-l~~W~~~ 234 (431)
..-.+..++|++ +-.|+..
T Consensus 205 ~~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 205 STYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CCcceEEEEccCCCCCcccC
Confidence 223456677765 3456543
No 51
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.45 E-value=2.1e-06 Score=83.99 Aligned_cols=74 Identities=16% Similarity=0.189 Sum_probs=52.4
Q ss_pred ccCCeEEEecCCCeEEEEEeeeeC---------CcceEEEEEeCCCCCcEEcccccccCC--------------CCCcee
Q 014058 192 FRDPTTAWQAPDGRWRVLVGGQID---------NEGMAFVYWSWDFIHWTKLDHPLYSVQ--------------ETGMWE 248 (431)
Q Consensus 192 ~RDP~Vv~~~~~g~~~M~~ga~~~---------~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------------~~~~wE 248 (431)
+|||+|+ ++.+|.|||+..+... ..+.|.+|+|+||.+|+..+..+.... .....+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999965 4457788888765431 124578999999999998775442211 123456
Q ss_pred eCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 249 CPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
+|+++.++ | +|+|.++..
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~ 98 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMN 98 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEcc
Confidence 99999987 6 888888764
No 52
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.34 E-value=7.4e-06 Score=81.18 Aligned_cols=77 Identities=14% Similarity=0.137 Sum_probs=55.6
Q ss_pred CCccCCeEEEecCCCeEEEEEeeeeCC----cceEEEEEeCCCCCcEEcccccccCC---CCCceeeCcEEEeccCCccc
Q 014058 190 DMFRDPTTAWQAPDGRWRVLVGGQIDN----EGMAFVYWSWDFIHWTKLDHPLYSVQ---ETGMWECPDIFPVSINGTIG 262 (431)
Q Consensus 190 ~~~RDP~Vv~~~~~g~~~M~~ga~~~~----~G~i~ly~S~Dl~~W~~~~~~l~~~~---~~~~wECPdlf~l~~~g~~~ 262 (431)
..+|||+|++.+++|.|||+..+.... ...+.+|+|+||.+|+..+..+.... ......+|+++..+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 468999987765689999998765321 12368999999999998875443221 12357899999886 5
Q ss_pred eecccCCCCeeeEEEEeeC
Q 014058 263 VDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 263 ~~~~~~~~~~k~vl~~s~~ 281 (431)
+|+|.++..
T Consensus 79 ----------~yyly~s~~ 87 (291)
T cd08981 79 ----------RYYMFATFH 87 (291)
T ss_pred ----------EEEEEEEec
Confidence 888887764
No 53
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.27 E-value=1.6e-05 Score=78.35 Aligned_cols=78 Identities=18% Similarity=0.372 Sum_probs=56.0
Q ss_pred CCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEec
Q 014058 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 177 ~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
.||||. ..+.||.|++. +++|||+.++.. ..+.+.+|+|+||.+|+..+..+. ...+++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~~--~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~-~~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILRD--GEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALP-EYEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEEE--CCEEEEEEcchh-cCCCEEEEECCCcCCceEcccccc-CCCCCEE-cCeeEEEC
Confidence 478884 24579997643 789999765422 223478999999999998875443 2345688 89999986
Q ss_pred cCCccceecccCCCCeeeEEEEeeC
Q 014058 257 INGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 257 ~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
| ||+|.++..
T Consensus 75 --g-------------kyy~yys~~ 84 (280)
T cd09002 75 --G-------------RYYIYFPAI 84 (280)
T ss_pred --C-------------EEEEEEEee
Confidence 6 788887764
No 54
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.27 E-value=4.1e-05 Score=75.45 Aligned_cols=154 Identities=14% Similarity=0.138 Sum_probs=92.9
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCC--ccceecccccCCCCccCCCCeEeecEEEccCCeE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL--INWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dl--v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~ 141 (431)
.+-+..|. +++.+|+|||||..+..+. + ....++|+|+|+ -.|+..++++.+........+..++++.++||++
T Consensus 55 ~~~~wAP~-v~~~~g~yyl~ys~~~~~~--~-~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~ 130 (288)
T cd08998 55 SGNLWAPD-VIYLNGKYYLYYSVSTFGS--N-RSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKL 130 (288)
T ss_pred CCCccCCe-EEEECCEEEEEEEEEeCCC--C-ceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCE
Confidence 34466777 7789999999998764321 2 567899999999 7999987666554322233566888888778999
Q ss_pred EEEEeeccCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-C---C
Q 014058 142 FILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-D---N 216 (431)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-~---~ 216 (431)
+|+|.+... .+.++ .+.|.+.+ ..+... ...++..+. ...-...|++ ++ .+|+|||++++.. . .
T Consensus 131 Yl~~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~--~~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~ 199 (288)
T cd08998 131 WLSFGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPR--GHGAIEAPYI-IY-RGGYYYLFVSYGGCCAGED 199 (288)
T ss_pred EEEeeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCC--CCCceeeeEE-EE-eCCEEEEEEEcchhcCCCC
Confidence 999975321 12223 33332211 122110 011222221 1123568985 45 4899999987532 1 1
Q ss_pred cc-eEEEEEeCCCC-CcE
Q 014058 217 EG-MAFVYWSWDFI-HWT 232 (431)
Q Consensus 217 ~G-~i~ly~S~Dl~-~W~ 232 (431)
.+ ++.+++|+++. -|+
T Consensus 200 ~~y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 200 STYNIRVGRSKSITGPYV 217 (288)
T ss_pred CceEEEEEEcCCCCCCcC
Confidence 12 57789998864 465
No 55
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.25 E-value=1.3e-05 Score=79.19 Aligned_cols=129 Identities=18% Similarity=0.169 Sum_probs=85.9
Q ss_pred ceEEC-CEEEEEEEECCCCCCCCCcceEEEEEeC-CCccceeccc--ccCCCCccCCCCeEeecEEEccCCeEEEEEeec
Q 014058 73 PMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSY-DLINWIHLSH--ALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (431)
Q Consensus 73 ~i~~~-G~YHlFyq~~P~~~~wg~~~~WgHa~S~-Dlv~W~~~~~--aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 148 (431)
++.++ |+|+|||..+......+ ....++|+|+ |+++|++.+. .+.|. ..+..+.-.+.++.+ +|+++|+|++.
T Consensus 68 av~~~~g~~~~~YTg~~~~~~~~-~~~~~lA~S~ddg~~w~k~~~~~~~~~~-~~~~~~~RDP~V~~~-~g~~~m~~g~~ 144 (298)
T cd08996 68 AVVDDNGKLVLFYTGNVKLDGGR-RQTQCLAYSTDDGRTFTKYEGNPVIPPP-DGYTTHFRDPKVFWH-DGKWYMVLGAG 144 (298)
T ss_pred EEEcCCCcEEEEEeceeCCCCCc-eEEEEEEEEcCCCCEEEECCCCceEcCC-CCCCCcccCCeEEeE-CCEEEEEEEEE
Confidence 34566 99999998754321112 5678999999 8999998753 23211 223345567777764 79999999987
Q ss_pred cCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCC--CeEEEEEeeee
Q 014058 149 DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD--GRWRVLVGGQI 214 (431)
Q Consensus 149 ~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~--g~~~M~~ga~~ 214 (431)
..+....+.++.|+|. ++|++. .++.... +.....+.-|.+ ++ .+ ++|+|+++...
T Consensus 145 ~~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~-~~~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 145 TEDGTGRILLYRSDDL-----KNWEYL--GELLTSL-GDFGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred ecCCCcEEEEEECCCC-----CCCEEc--ceecccC-CCccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 5444566778888885 799875 3443211 112346788985 44 46 99999998764
No 56
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.11 E-value=1.8e-05 Score=77.53 Aligned_cols=78 Identities=22% Similarity=0.353 Sum_probs=55.2
Q ss_pred CcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccC---------CCCCcee
Q 014058 178 NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV---------QETGMWE 248 (431)
Q Consensus 178 ~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~---------~~~~~wE 248 (431)
||||. ..+.||.|+.. ++.|||+.+......| +.+|+|+||.+|+..+..+... ..+++|
T Consensus 1 NPvi~-------~~~~DP~ii~~--~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIRA--GDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEEE--CCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 57763 35679997644 7899999865432233 6799999999999987644321 123466
Q ss_pred eCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 249 CPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
+|+++..+ | ||+|.++..
T Consensus 70 AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred cceEEEEC--C-------------EEEEEEecc
Confidence 99999987 6 788877764
No 57
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=98.06 E-value=5.8e-05 Score=79.21 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=81.6
Q ss_pred ceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecc-cccCCCCccCCCCeEeecEEEccCCeEEEEEeeccCC
Q 014058 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS 151 (431)
Q Consensus 73 ~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 151 (431)
++..+|++||||..+.....+.....-.+|+|+|+.+|++.+ ++|.+.......+.-.+.++. .+|+++|++.+....
T Consensus 91 av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~-~~g~~~M~~g~~~~~ 169 (445)
T TIGR01322 91 AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWK-HNGHWYMVIGAQTET 169 (445)
T ss_pred EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEe-ECCEEEEEEEEecCC
Confidence 345799999999976432223212335689999999999986 456543221112334566654 589999999775433
Q ss_pred CceeEEEEEecCCCCCccceeeeecCCcEEcCCC---CCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 152 ~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~---~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
......+..|+|. ++|+.. .++..+.. +.....+.-|-+ +. .+++|+|+++..
T Consensus 170 ~~g~i~ly~S~Dl-----~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl-f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 170 EKGSILLYRSKDL-----KNWTFV--GEILGDGQNGLDDRGYMWECPDL-FS-LDGQDVLLFSPQ 225 (445)
T ss_pred CceEEEEEECCCc-----ccCeEe--cccccccccccCCccceEECCeE-EE-ECCcEEEEEecc
Confidence 3334456677764 899975 34543220 111235778874 44 578999999754
No 58
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.05 E-value=0.00033 Score=68.50 Aligned_cols=142 Identities=9% Similarity=0.054 Sum_probs=86.3
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-ccee-cc-cccCCCCccCCCCeEeecEEEccCCeEEE
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIH-LS-HALCPSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~-~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
+.-|. +++.+|+|+|||..+ ...++|+|+|.. .|+. .+ +.+.+.. .......++++.++||+++|
T Consensus 66 ~wAP~-v~~~~g~yy~yys~~---------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl 133 (275)
T cd09004 66 AWAPS-VIERNGKYYFYFSAN---------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYL 133 (275)
T ss_pred cCCCe-EEEECCEEEEEEEcC---------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEE
Confidence 44566 788999999999853 347899999975 7887 33 3343321 12345678888877899999
Q ss_pred EEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC--CcceEE
Q 014058 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMAF 221 (431)
Q Consensus 144 ~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~--~~G~i~ 221 (431)
+|.+.. .......+.|. .+|+.. ..++.... ...+.-|.+ ++ .+|+|||++.+... ..-++.
T Consensus 134 ~~~~~~----~~~i~~l~~d~-----~~~~~~--~~~~~~~~---~~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 134 YWGGWG----HCNVAKLNEDM-----ISFDGE--RDGSEITP---KNYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEcCcC----CEEEEEECCCc-----ccccCc--ceeeeccC---CCceecceE-EE-ECCEEEEEEECCCCCCCCceEE
Confidence 997531 11112344443 455432 11221111 124567885 45 48999999887542 122566
Q ss_pred EEEeCCCC-CcEEccc
Q 014058 222 VYWSWDFI-HWTKLDH 236 (431)
Q Consensus 222 ly~S~Dl~-~W~~~~~ 236 (431)
.++|++.. -|+....
T Consensus 198 ya~s~~~~GP~~~~~~ 213 (275)
T cd09004 198 YAMADSPLGPFERPGN 213 (275)
T ss_pred EEEcCCCCCCcccCCc
Confidence 77887764 4876543
No 59
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.97 E-value=8.7e-05 Score=72.66 Aligned_cols=103 Identities=17% Similarity=0.246 Sum_probs=78.4
Q ss_pred CeEeecEEEccCCeEEEEEeec-----cCCCceeEEEEEecCCCCCccce-eeeecCCcEEcC-CCCCCCCCccCCeEEE
Q 014058 127 SCWSGSVTILPGDKPFILYTGI-----DASGQQVQNLAMPENLSDPLLKD-WVKFSGNPVMTP-PNGVKDDMFRDPTTAW 199 (431)
Q Consensus 127 gv~SGsav~~~dg~~~l~YTg~-----~~~~~~~q~lA~S~D~~d~~l~~-w~k~~~~Pvi~~-p~~~~~~~~RDP~Vv~ 199 (431)
.+|-++++. .+++++++|-.. .........+|.|+|+ .+ |++. .+|++.+ ....+.....||-|+.
T Consensus 30 ~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~P~~~~~e~~G~EDPRvt~ 102 (314)
T COG2152 30 SVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLWPANYPYEIYGIEDPRVTK 102 (314)
T ss_pred EEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEecCCCchhhhcccCceEEE
Confidence 689998877 499999998762 2235567789999997 34 8876 4788866 3334566789999754
Q ss_pred ecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEccccc
Q 014058 200 QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPL 238 (431)
Q Consensus 200 ~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l 238 (431)
.+++|+|.+.+..+...+..+..++|+.+|++.+.++
T Consensus 103 --I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~ 139 (314)
T COG2152 103 --IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIF 139 (314)
T ss_pred --ECCEEEEEEEecCCCCcccchhhhhhhhhhhhccccc
Confidence 4799999999976555567788999999999987644
No 60
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.95 E-value=0.00083 Score=65.64 Aligned_cols=145 Identities=14% Similarity=0.202 Sum_probs=88.8
Q ss_pred CccCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 66 WINDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 66 w~NDPnG~i~~--~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
.+.-|. ++|. +|+|||||...... .+ ....|+|+|++.. .|+.++..+ |. ......+++++++||+.+
T Consensus 64 ~~waP~-v~y~~~~g~Y~m~~~~~~~~--~~-~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Y 134 (265)
T cd08985 64 IIERPK-VIYNAKTGKYVMWMHIDSSD--YS-DARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAY 134 (265)
T ss_pred EEECCe-EEEeCCCCEEEEEEEeCCCC--Cc-ceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEE
Confidence 344555 5664 59999999986422 23 6789999999875 688766433 21 123466888888899999
Q ss_pred EEEeeccCCCceeEEEEEe-cCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-CcceE
Q 014058 143 ILYTGIDASGQQVQNLAMP-ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMA 220 (431)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S-~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-~~G~i 220 (431)
|+|.+.. .....++.- .|. ..+. +.+.... .......|.+ ++ .+|.|||+...... ....+
T Consensus 135 l~~~~~~---~~~i~i~~L~~d~-----~~~~---~~~~~~~----~~~~~EaP~i-~K-~~g~YYL~~S~~t~~~~~~~ 197 (265)
T cd08985 135 LLYSDRD---NSDLYIYRLTDDY-----LSVT---GEVTTVF----VGAGREAPAI-FK-RNGKYYLLTSGLTGWNPNDA 197 (265)
T ss_pred EEEecCC---CCceEEEEeCCCc-----cccc---ceEEEcc----CCCccccceE-EE-ECCEEEEEEccCCCccCCce
Confidence 9998642 123344432 222 2332 2333211 1235678984 56 58999999876431 11245
Q ss_pred EEEEeCCCC-CcEEccc
Q 014058 221 FVYWSWDFI-HWTKLDH 236 (431)
Q Consensus 221 ~ly~S~Dl~-~W~~~~~ 236 (431)
..++|+++. .|+..+.
T Consensus 198 ~y~~s~s~~GP~~~~~~ 214 (265)
T cd08985 198 RYATATSILGPWTDLGN 214 (265)
T ss_pred EEEEecCCCCCccccCc
Confidence 677887764 5776654
No 61
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=97.89 E-value=0.00038 Score=70.58 Aligned_cols=149 Identities=17% Similarity=0.204 Sum_probs=91.8
Q ss_pred ECCEEEEEEEECCCCCCC--CCcceEEEEEeCCC----ccceecccccCCCCc-cC-------------CCCeEeecEEE
Q 014058 76 YKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDL----INWIHLSHALCPSGP-YD-------------INSCWSGSVTI 135 (431)
Q Consensus 76 ~~G~YHlFyq~~P~~~~w--g~~~~WgHa~S~Dl----v~W~~~~~aL~P~~~-~D-------------~~gv~SGsav~ 135 (431)
.+|+|||||..+-..... ......++++|+|+ ..|+.+...+.+++. |+ ....-.+.++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 359999999987321111 11467999999998 455555555556542 21 11233556666
Q ss_pred cc-CCeEEEEEeeccCCC---------------------------ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCC
Q 014058 136 LP-GDKPFILYTGIDASG---------------------------QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (431)
Q Consensus 136 ~~-dg~~~l~YTg~~~~~---------------------------~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~ 187 (431)
++ +|+.+|+++++.... .-.+++|++++. .+.+|+-. .|++.+.. .
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~~-v 233 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEANG-V 233 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCCC-c
Confidence 54 588999999875421 124567877643 25789865 57876432 1
Q ss_pred CCCCccCCeEEEecCCCeEEEEEeeeeC-------CcceEEEEEeCCCC-CcEE
Q 014058 188 KDDMFRDPTTAWQAPDGRWRVLVGGQID-------NEGMAFVYWSWDFI-HWTK 233 (431)
Q Consensus 188 ~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-------~~G~i~ly~S~Dl~-~W~~ 233 (431)
..++.+|.++ + .+|+|||+..++.. +...+..|.|+++. .|+.
T Consensus 234 -~d~~E~P~v~-~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 234 -NDELERPHVV-F-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred -CCceEcceEE-E-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 2458899954 4 48999999875542 11235567888874 4554
No 62
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.82 E-value=0.0008 Score=66.16 Aligned_cols=151 Identities=10% Similarity=0.144 Sum_probs=85.9
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-c-----ceecccccCCCCccCCCCeEeecEEEccCC
Q 014058 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-N-----WIHLSHALCPSGPYDINSCWSGSVTILPGD 139 (431)
Q Consensus 66 w~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~-----W~~~~~aL~P~~~~D~~gv~SGsav~~~dg 139 (431)
-+.-|. +++++|+|||||.....+. . ...+|.|+|++.. - |+..++.+.+... +......+++++++||
T Consensus 56 ~~WAP~-v~~~~G~yylyys~~~~~~--~-~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG 130 (279)
T cd08988 56 HLWAPD-IYQHNGKFYLYYSVSAFGS--N-TSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHG 130 (279)
T ss_pred CEecce-EEEECCEEEEEEEeccCCC--C-CceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCC
Confidence 355676 7889999999998765432 1 4578999999864 3 5443343433322 1234567889998889
Q ss_pred eEEEEEeeccCCCceeEEEEEecCCCCCccceeeee-cCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee----
Q 014058 140 KPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF-SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI---- 214 (431)
Q Consensus 140 ~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~-~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~---- 214 (431)
+.+|+|.... .. ....-.+.|... .... ....++..+. +.....-|++ ++ .+|+|||++++..
T Consensus 131 ~~Yl~~g~~~-~g--i~~~eL~~d~~~-----~~~~~~~~~i~~~~~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~~~ 198 (279)
T cd08988 131 QPWLSFGSFW-GG--IKLFELDKDTMK-----PAEPGELHSIAGRER--SSAAIEAPFI-LY-RGDYYYLFVSFGLCCRG 198 (279)
T ss_pred CEEEEecccC-CC--EEEEEECcccCC-----ccCCCcceEEeccCC--CCCceEeeEE-EE-cCCeEEEEEEcCcccCC
Confidence 9999996432 11 122233444321 1000 0011222211 1124567884 55 4899999886532
Q ss_pred -CCcceEEEEEeCCCC-CcEE
Q 014058 215 -DNEGMAFVYWSWDFI-HWTK 233 (431)
Q Consensus 215 -~~~G~i~ly~S~Dl~-~W~~ 233 (431)
+..-.+.+++|+++. -|+.
T Consensus 199 ~~~~y~v~~arS~~~~GPy~~ 219 (279)
T cd08988 199 GDSTYKIAVGRSKNITGPYLD 219 (279)
T ss_pred CCCCeEEEEEEeCCCCCCCCC
Confidence 112257788998874 3443
No 63
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.00028 Score=74.18 Aligned_cols=166 Identities=19% Similarity=0.287 Sum_probs=93.0
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCcc-------CCCCeEeecEEEccCCe
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-------DINSCWSGSVTILPGDK 140 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~-------D~~gv~SGsav~~~dg~ 140 (431)
-||. +|.....|++=-. -+ .|= + .-.-+.|+||+||+.....|.+...+ +..|||.+++. .+||+
T Consensus 31 PDpS-i~rvg~dyYia~s--tF--~~f-p-Gl~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGk 102 (549)
T COG3507 31 PDPS-IVRVGDDYYIATS--TF--EWF-P-GLAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGK 102 (549)
T ss_pred CCCc-eEecCCceEEEcc--eE--EEc-C-ceeeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCc
Confidence 4776 6666666665321 00 110 1 13457899999999998766665422 35689999986 68999
Q ss_pred EEEEEeeccCCC---ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC-
Q 014058 141 PFILYTGIDASG---QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN- 216 (431)
Q Consensus 141 ~~l~YTg~~~~~---~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~- 216 (431)
++|+||...... ....+..++.+..+ ..|.. |+..+. ..--||.++ +++||+-||+.+....+
T Consensus 103 fwl~ytdvk~~~g~~k~~~nyl~t~~s~~---G~WsD----pi~l~~-----~~~iDPslf-~D~dGr~wlv~~~w~~~~ 169 (549)
T COG3507 103 FWLYYTDVKRSGGPYKNAGNYLVTAESID---GPWSD----PIKLNG-----SNAIDPSLF-FDKDGRKWLVNGSWDGGI 169 (549)
T ss_pred EEEEEecccccCCcccccccEEEEecCCC---CCccc----ceecCC-----cCccCCcee-ecCCCCEEEEecccCCCc
Confidence 999998664321 11122333332221 36753 343221 123499965 55899999999876422
Q ss_pred -----cceEEEEEeC---CCCCcEEcccccccCCCCCceeeCcEEEec
Q 014058 217 -----EGMAFVYWSW---DFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 217 -----~G~i~ly~S~---Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
.+.++-..++ -|..+.+ + .+..+......|-|-+++-+
T Consensus 170 ~~~~~~~i~l~~~~~~~~~l~g~~~-~-~~~~G~~~~~~EGPhl~k~~ 215 (549)
T COG3507 170 FMHSFAGIILQEYDKTTQKLVGQGY-K-IIFDGGNGGLTEGPHLYKKT 215 (549)
T ss_pred ccccccceeeeeccccccccCCccc-e-eEeccCCCccccCceeeccC
Confidence 1333222221 1222211 1 12333344578999888776
No 64
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.72 E-value=0.0028 Score=63.40 Aligned_cols=148 Identities=11% Similarity=0.125 Sum_probs=85.4
Q ss_pred cCCCcceEEC----CEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceec-cc-ccCCCCc-cC-CCCeEeecEEEccC
Q 014058 68 NDPNGPMYYK----GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHL-SH-ALCPSGP-YD-INSCWSGSVTILPG 138 (431)
Q Consensus 68 NDPnG~i~~~----G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~-~~-aL~P~~~-~D-~~gv~SGsav~~~d 138 (431)
.-|. +++.+ |+|+|||... ....+.|+|++.. .|+++ +. .+.+... .+ ......+++++++|
T Consensus 79 WAP~-v~~~~~~~~gkyylyy~~~--------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdD 149 (311)
T cd09003 79 WAPS-IAVKKINGKGKFYLYFANG--------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDD 149 (311)
T ss_pred CCCc-eEEeccCCCCEEEEEEecC--------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCC
Confidence 3565 67888 9999999531 2458999999965 89975 32 2222111 11 11246788888889
Q ss_pred CeEEEEEeeccC----CCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 139 DKPFILYTGIDA----SGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 139 g~~~l~YTg~~~----~~~~~q~lA~-S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
|+.+|+|.+... ...+.+.+|- +.|. .+ ..+.++....+ ..+.-|.+ ++ .+|+|||++++.
T Consensus 150 G~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~~----~~~Egp~~-~K-~~G~YYL~ys~~ 215 (311)
T cd09003 150 GQGYLYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDAP----YFFEASGL-HK-INGTYYYSYCTN 215 (311)
T ss_pred CCEEEEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccCC----CceEeeeE-EE-ECCEEEEEEeCC
Confidence 999999975321 1112334443 3332 22 22233321111 24567884 45 589999998754
Q ss_pred e-------CCcceEEEEEeCCCC-CcEEccccc
Q 014058 214 I-------DNEGMAFVYWSWDFI-HWTKLDHPL 238 (431)
Q Consensus 214 ~-------~~~G~i~ly~S~Dl~-~W~~~~~~l 238 (431)
- ....++..++|++.. .|+..+.++
T Consensus 216 ~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 216 FGGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred CCccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 1 223456667887654 587655433
No 65
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.72 E-value=0.00058 Score=66.61 Aligned_cols=155 Identities=17% Similarity=0.215 Sum_probs=100.2
Q ss_pred CCcccceeeecCCCCccCCCcceEEC-CEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecc-cccCCCCccCCCCeE
Q 014058 52 QPYLTSYHFRPPQNWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCW 129 (431)
Q Consensus 52 ~~~Rp~~H~~p~~gw~NDPnG~i~~~-G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~-~aL~P~~~~D~~gv~ 129 (431)
.+|+..-.+.......-||. ++.++ |+++|+|-..... ... ..-+....+.|..++...+ ..+.+.......++.
T Consensus 104 Gp~~~~~~~~~~~~~~iD~~-vf~d~dG~~Yl~~~~~~~~-~~~-~~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~ 180 (286)
T PF04616_consen 104 GPWTDPGKIPIPGGNSIDPS-VFVDDDGKYYLYYGSWDNG-DPG-GGIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVV 180 (286)
T ss_dssp S-EEEEEEEEEESSSSSSEE-EEEETTSEEEEEEEESTTT-SSE-EEEEEEEEETTTSSEEEEECEEEEEESGSSTTTBE
T ss_pred cccccccceeeccccccCce-EEEecCCCcEEeCcccCCC-ccc-eeEEeecccCccccccCcccccccccccccCCccc
Confidence 57777666655577778999 66665 9999999875443 112 3456666788998888776 444444323345677
Q ss_pred eecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCCCCCCccCCeEEEecCCCeEEE
Q 014058 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVKDDMFRDPTTAWQAPDGRWRV 208 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p-~~~~~~~~RDP~Vv~~~~~g~~~M 208 (431)
-|+.++..+|.++|+|++..........+|.|++.. ..|+..+.+|++... .......-.-.. ++...+|+|+|
T Consensus 181 Egp~~~k~~g~yYl~~s~~~~~~~y~v~~~~s~~~~----gp~~~~~~~~~~~~~~~~~~~~g~gH~~-~~~~~~g~~~~ 255 (286)
T PF04616_consen 181 EGPFVFKHGGKYYLFYSAGGTGSPYQVGYARSDSPL----GPWEWKKGNPILFSRDGENGVYGPGHGS-VFKDPDGRWYI 255 (286)
T ss_dssp EEEEEEEETTEEEEEEEESGSSTTTEEEEEEESSTT----SGGEETTTCBCEGTTBTTSSCEEEEEEE-EEEETTSEEEE
T ss_pred cceEEEEcCCCEEEEEeccCCCCCceEEEeeccCCC----CceeeccCCeEEEeeccCCccccCccCC-EEECCCCCEEE
Confidence 788887789999999997654444667789998874 456665567777531 111111222233 44657888988
Q ss_pred EEeeee
Q 014058 209 LVGGQI 214 (431)
Q Consensus 209 ~~ga~~ 214 (431)
++-+..
T Consensus 256 ~yh~~~ 261 (286)
T PF04616_consen 256 VYHARN 261 (286)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 886554
No 66
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.69 E-value=0.00033 Score=73.41 Aligned_cols=132 Identities=17% Similarity=0.214 Sum_probs=80.7
Q ss_pred ceEECCEEEEEEEECC-CCC--CCCCcceEEEEEeCCCccceec--ccccCCCCccCCCCeEeecEEEccCCeEEEEEee
Q 014058 73 PMYYKGVYHLFYQYNP-LGP--LFGDKMIWAHSVSYDLINWIHL--SHALCPSGPYDINSCWSGSVTILPGDKPFILYTG 147 (431)
Q Consensus 73 ~i~~~G~YHlFyq~~P-~~~--~wg~~~~WgHa~S~Dlv~W~~~--~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 147 (431)
++..+|+|||||.-+- ..+ .......-.+|+|+|+++|++. .++|.+...+.....-.+.++..++|+++|++.+
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~ 153 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGA 153 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEE
Confidence 4456888999998752 111 1120122367899999999997 3666554322222334566655434689999887
Q ss_pred ccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCC-----eEEEEEeee
Q 014058 148 IDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG-----RWRVLVGGQ 213 (431)
Q Consensus 148 ~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g-----~~~M~~ga~ 213 (431)
...+..-.+.++.|+|. ++|+.. .++.....+.....|.-|-+ +. .++ +|+|+++..
T Consensus 154 ~~~~~~G~i~ly~S~Dl-----~~W~~~--~~~~~~~~~~~g~~wECPdl-f~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 154 SDEDKTGIALLYRSTDL-----KNWTLL--GELLHSGVGDTGGMWECPDL-FP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EecCCCeEEEEEECCCc-----ccCeEC--CcccccCCCCccceEECCcE-EE-eCCCCCceeEEEEECcC
Confidence 65444555778888774 899874 34543211111246778874 33 345 899999775
No 67
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.65 E-value=0.0017 Score=63.52 Aligned_cols=134 Identities=10% Similarity=0.072 Sum_probs=80.5
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeEEEEE
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (431)
+.-|. +++.+|+|||||..+. ...+.|+|++.. .|++.+... ....+++++++||+.+|+|
T Consensus 76 ~WAP~-v~~~~gkyy~yys~~~--------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~ 137 (269)
T cd09001 76 QWAPS-LRYHNGTFYVFFCTNT--------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVY 137 (269)
T ss_pred EECCc-eEEECCEEEEEEEecC--------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEe
Confidence 45676 7889999999998751 124667777754 787765322 2345788888899999998
Q ss_pred eeccCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEE
Q 014058 146 TGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW 224 (431)
Q Consensus 146 Tg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~ 224 (431)
.+. .+.++ .+.|. ..... ....++..+.. ......-|++ ++ .+|+|||++.+.......+.+++
T Consensus 138 ~~~------~i~~~~l~~d~-----~~~~~-~~~~~~~~~~~-~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~ 202 (269)
T cd09001 138 GGG------TIRLVELSPDL-----TGVGG-KDQVIIDAGEE-IGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLR 202 (269)
T ss_pred CCC------cEEEEEECccc-----CCcCC-CceEEEeCCCc-cccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEE
Confidence 643 23333 34443 22211 11223333211 1234567885 45 58999999986532223556789
Q ss_pred eCCCC-CcEE
Q 014058 225 SWDFI-HWTK 233 (431)
Q Consensus 225 S~Dl~-~W~~ 233 (431)
|+++. -|+.
T Consensus 203 s~~~~GP~~~ 212 (269)
T cd09001 203 SKSLTGPYES 212 (269)
T ss_pred eCCCCCCcCC
Confidence 98864 3554
No 68
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=97.63 E-value=0.0043 Score=59.07 Aligned_cols=185 Identities=16% Similarity=0.259 Sum_probs=102.2
Q ss_pred ecCCCCc--cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEE-cc
Q 014058 61 RPPQNWI--NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTI-LP 137 (431)
Q Consensus 61 ~p~~gw~--NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~-~~ 137 (431)
.|..||. .||- .++++|+||+|....-.+..|+ .| .=..+-+|.+...| +..-.+. +.-.+.++. .+
T Consensus 17 ~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~-sm-----~f~~Ftdws~~~sA--~q~~m~~-~~vAP~vFYFaP 86 (271)
T PF03664_consen 17 QPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYG-SM-----NFGPFTDWSQMASA--SQNYMDQ-SAVAPQVFYFAP 86 (271)
T ss_pred cCCCCceeccCce-EEeECCEEEEEEEeccCCCccc-eE-----eeeccCCHHHhhcc--ccccCCc-ccccceEEEecC
Confidence 4667885 6999 8899999999998764444444 33 33345577776543 2211121 222333332 25
Q ss_pred CCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCc
Q 014058 138 GDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (431)
Q Consensus 138 dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~ 217 (431)
.+.++|.|.-.. ..-...+++|.+++ ..|... .|++...........-|..||-+ +..-||+.+.. .
T Consensus 87 k~~W~L~yQwg~----~~fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~~~~g~iD~~vI~D--~~n~yLFfa~D---n 153 (271)
T PF03664_consen 87 KNIWYLAYQWGP----AAFSYSTSSDPTNP--NGWSAP--QPLFSGSISGSGTGPIDQWVICD--DTNMYLFFAGD---N 153 (271)
T ss_pred CcEEEEEEecCC----CcceeecCCCCCCC--ccCCCC--cccccccccCCCCCceeeEEEec--CCceEEEEcCC---C
Confidence 788899886321 11123456677665 468863 46653211111234579888754 33445555443 2
Q ss_pred ceEEEEEeCC-CCCc----EEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCC
Q 014058 218 GMAFVYWSWD-FIHW----TKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD 283 (431)
Q Consensus 218 G~i~ly~S~D-l~~W----~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~ 283 (431)
|. ||+|.- +-+. .-....+.+.......|.++++++. | ..++.|++-..+.
T Consensus 154 Gk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G-----------~~~YLmiVEaiGs 209 (271)
T PF03664_consen 154 GK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--G-----------QNQYLMIVEAIGS 209 (271)
T ss_pred Cc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--C-----------CceEEEEEEEecC
Confidence 53 788742 2222 1001112222345579999999997 5 2377887766443
No 69
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.55 E-value=0.0059 Score=60.10 Aligned_cols=130 Identities=14% Similarity=0.192 Sum_probs=72.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCC----CccceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD----LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~D----lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
+.-|. +++.+|+|||||...-.+.. . ....+.++|++ +-.|+..+..+.+.. .....++++.+ +|+.+
T Consensus 55 ~WAP~-i~~~~g~yylyys~~~~~~~-~-~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~~----~~~iDp~~~~d-dG~~Y 126 (288)
T cd08980 55 LWAPE-LHYIDGKWYIYFAAGDGGGN-A-NHRMYVLENAGADPPTGPWTFKGRLADPTD----RWAIDGTVFEH-NGQLY 126 (288)
T ss_pred EECce-EEEECCEEEEEEEccCCCCC-c-ceeEEEEEeCCCCCCCCCceEeeEeccCCC----CeeeeeEEEEE-CCEEE
Confidence 44555 67889999999986532111 1 34456666664 568998765442221 23467787775 79999
Q ss_pred EEEeeccC--CCceeEEEEEecCCCCCccceeeeecCCcE-EcCC-CCCCC---CCccCCeEEEecCCCeEEEEEeeee
Q 014058 143 ILYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPV-MTPP-NGVKD---DMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 143 l~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pv-i~~p-~~~~~---~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
|+|.+... ...+.+.++...+. .++. +.++ +..+ ..++. .-..-|+++ + .+|.|||++++..
T Consensus 127 l~~~~~~~~~~~~~~i~~~~l~~~-----~~~~---g~~~~i~~p~~~we~~~~~~~EgP~~~-k-~~G~yYl~yS~~~ 195 (288)
T cd08980 127 FVWSGWEGRTNGNQNLYIAKMSNP-----WTLT---GPRVLISRPEYDWERQGPGVNEGPAAL-K-RNGKVFLTYSASG 195 (288)
T ss_pred EEEEccCCCCCCCccEEEEECCCC-----CccC---CcceEecCCCCCceecCceeeECcEEE-E-ECCEEEEEEECCC
Confidence 99986432 12233334433332 1232 2232 2222 12221 124578754 4 3799999998754
No 70
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.46 E-value=0.0019 Score=62.63 Aligned_cols=149 Identities=19% Similarity=0.216 Sum_probs=88.9
Q ss_pred CccCCCcceE-ECCEEEEEEEECCCCCCCCCcceEEEEEeCC-CccceecccccCCCCccCCCCeEeecEEEccCCeEEE
Q 014058 66 WINDPNGPMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 66 w~NDPnG~i~-~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
=..||. +++ .+|+.||||........|. .....+.+|+| ..+|+.... |.+.......+...+.++...+|++++
T Consensus 47 ~~~~p~-~~~~~~g~l~l~~~~~~~~~~~~-~~~~~~~~S~D~G~TWs~~~~-l~~~~~~~~~~~~~~~~i~~~~G~l~~ 123 (275)
T PF13088_consen 47 RYGNPS-LVVDPDGRLWLFYSAGSSGGGWS-GSRIYYSRSTDGGKTWSEPTD-LPPGWFGNFSGPGRGPPIQLPDGRLIA 123 (275)
T ss_dssp EEEEEE-EEEETTSEEEEEEEEEETTESCC-TCEEEEEEESSTTSS-EEEEE-EHHHCCCSCEECSEEEEEEECTTEEEE
T ss_pred cccCcE-EEEeCCCCEEEEEEEccCCCCCC-ceeEEEEEECCCCCCCCCccc-cccccccceeccceeeeeEecCCCEEE
Confidence 346787 555 4999999996665554454 45555599998 799998652 322211222344455556667898777
Q ss_pred E-EeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEE
Q 014058 144 L-YTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (431)
Q Consensus 144 ~-YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~l 222 (431)
- |.. . .......+.+|.|++ ++|+... ++.. ....--|.++.. .+|+.+|++-.. ..+.+.+
T Consensus 124 ~~~~~-~-~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~~~~-~dG~l~~~~R~~--~~~~~~~ 186 (275)
T PF13088_consen 124 PYYHE-S-GGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSIVEL-PDGRLLAVFRTE--GNDDIYI 186 (275)
T ss_dssp EEEEE-S-SCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEEEEE-TTSEEEEEEEEC--SSTEEEE
T ss_pred EEeec-c-ccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEEEEC-CCCcEEEEEEcc--CCCcEEE
Confidence 5 443 1 244666778899986 7998752 2210 112234554333 678888877553 2236677
Q ss_pred EEeCC-CCCcEEc
Q 014058 223 YWSWD-FIHWTKL 234 (431)
Q Consensus 223 y~S~D-l~~W~~~ 234 (431)
++|.| +.+|+..
T Consensus 187 ~~S~D~G~TWs~~ 199 (275)
T PF13088_consen 187 SRSTDGGRTWSPP 199 (275)
T ss_dssp EEESSTTSS-EEE
T ss_pred EEECCCCCcCCCc
Confidence 88877 6899863
No 71
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.33 E-value=0.012 Score=57.99 Aligned_cols=146 Identities=15% Similarity=0.065 Sum_probs=85.6
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCC-ccceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dl-v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
.+-+.-|. +++.+|+|||||...... + ....+.++|+|. -.|++.. +.+. .+..++++.++||+.+
T Consensus 65 ~~~~WAP~-v~~~~g~yy~yy~~~~~~--~--~~~~~v~~s~~p~gpw~~~~--~~~~------~~iDp~vf~d~dG~~Y 131 (288)
T cd09000 65 SGGIWAPT-IRYHDGTFYLITTNVDGM--K--DGGNFIVTADDPAGPWSDPV--WLDS------GGIDPSLFFDDDGKVY 131 (288)
T ss_pred CCceEcce-EEEECCEEEEEEEecCCC--C--CCceEEEEeCCCCCCCcCCE--ecCC------CccCCceeEcCCCCEE
Confidence 33455677 788999999999876532 2 345678899988 3787422 2222 3456888887789999
Q ss_pred EEEeeccCC----CceeEEEEEecCCCCCccceeeeecCCc--EEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-
Q 014058 143 ILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNP--VMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID- 215 (431)
Q Consensus 143 l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~P--vi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~- 215 (431)
|+|...... ....+.++-.+. ..++-. +.+ +..... .....-|.+ ++ .+|+|||++.....
T Consensus 132 ~~~~~~~~~~~~~~~~~i~~~~l~~------~~~~~~-~~~~~~~~~~~---~~~~Egp~v-~k-~~g~YYl~ys~~~~~ 199 (288)
T cd09000 132 LVGNGWDERRGYNGHGGIWLQEIDL------ETGKLL-GEPKVIWNGTG---GRWPEGPHL-YK-RDGWYYLLIAEGGTG 199 (288)
T ss_pred EEecccCCccccCCCCcEEEEEEcc------ccCCCC-CCcEEEEeCCC---CCCcccCeE-EE-ECCEEEEEEecCCCC
Confidence 988653211 123344443221 112211 122 222111 123457885 45 58999999865432
Q ss_pred CcceEEEEEeCCCC-CcEEc
Q 014058 216 NEGMAFVYWSWDFI-HWTKL 234 (431)
Q Consensus 216 ~~G~i~ly~S~Dl~-~W~~~ 234 (431)
..-.+.+++|+++. .|+..
T Consensus 200 ~~~~v~~~~s~~~~Gp~~~~ 219 (288)
T cd09000 200 YGHSVTVARSRSITGPYEPA 219 (288)
T ss_pred CCeEEEEEEeCCCCCCCccC
Confidence 22357789999886 67653
No 72
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.26 E-value=0.021 Score=57.55 Aligned_cols=166 Identities=19% Similarity=0.201 Sum_probs=99.1
Q ss_pred CCCcccceeeecCC---CCccCCCcceEEC-CEEEEEEEECCCCC-------CCCCcceEEEEEeCCC-ccceecccccC
Q 014058 51 NQPYLTSYHFRPPQ---NWINDPNGPMYYK-GVYHLFYQYNPLGP-------LFGDKMIWAHSVSYDL-INWIHLSHALC 118 (431)
Q Consensus 51 ~~~~Rp~~H~~p~~---gw~NDPnG~i~~~-G~YHlFyq~~P~~~-------~wg~~~~WgHa~S~Dl-v~W~~~~~aL~ 118 (431)
...|.+.--+.... ..+.||. ++... |+-+|||...+... .+. ..+..+..|+|. .+|... ..|.
T Consensus 57 G~tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~S~D~G~tW~~p-~~l~ 133 (351)
T cd00260 57 GKTWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPS-NAYLVLVYSDDDGITWSSP-RDLT 133 (351)
T ss_pred CCcccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCC-ceEEEEEEEEcCCceecCC-ccCC
Confidence 35676654344332 3567898 67776 99999998877642 123 456778888876 899863 3333
Q ss_pred CCCc-cCCCCeE--eecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCC
Q 014058 119 PSGP-YDINSCW--SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDP 195 (431)
Q Consensus 119 P~~~-~D~~gv~--SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP 195 (431)
+... .+....+ .|+.++..+|++++.+.+....+.....+.+|+|.+ ++|+... +. . + ......|
T Consensus 134 ~~~~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~-~-~----~~~~~e~ 201 (351)
T cd00260 134 PSVKGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV-N-D----AGGCSEC 201 (351)
T ss_pred ccccCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC-C-C----CCCCcCC
Confidence 3321 1112222 334556668998775544332344556677898875 7997532 11 1 1 1233467
Q ss_pred eEEEecCCCeEEEEEeeeeCCcceEEEEEeCCC-CCcEEc
Q 014058 196 TTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF-IHWTKL 234 (431)
Q Consensus 196 ~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl-~~W~~~ 234 (431)
.++-. .+|+.+|+..... .+...++.|.|. ..|+..
T Consensus 202 ~i~el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~ 238 (351)
T cd00260 202 SVVEL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEA 238 (351)
T ss_pred EEEEe-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccC
Confidence 75533 4888888765532 456678888775 899864
No 73
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=96.86 E-value=0.034 Score=54.84 Aligned_cols=144 Identities=15% Similarity=0.216 Sum_probs=80.1
Q ss_pred ccCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCCc---cceecccccCCCCccCCCCeEeecEEEccCCeE
Q 014058 67 INDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI---NWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (431)
Q Consensus 67 ~NDPnG~i~~--~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv---~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~ 141 (431)
..-|. ++|+ +++|+|+||+. +...+||+|.. .|....+.+.........+...-.+ +.+|+++
T Consensus 78 fwAPq-Vfyf~pk~kwYL~Yq~~----------~~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~ 145 (303)
T cd08987 78 RVAPQ-VFYFAPQNKWYLIYQWW----------PAAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNC 145 (303)
T ss_pred cccCE-EeeeccCCEEEEEEecC----------ceEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCE
Confidence 34677 7765 59999999962 14689999974 5776655443322222223344444 5679999
Q ss_pred EEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCC--eEEEEEeeeeCCcce
Q 014058 142 FILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG--RWRVLVGGQIDNEGM 219 (431)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g--~~~M~~ga~~~~~G~ 219 (431)
+||+.+-+ + .+..|-... .+|-.....++.....+-...-|.-|.| ++ .+| +|+|++-|.....++
T Consensus 146 YLff~~dn--G--~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~r 213 (303)
T cd08987 146 YLFFSDDN--G--KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGR 213 (303)
T ss_pred EEEEecCC--C--eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCC
Confidence 99998743 2 344443222 1222211223331111112256778885 55 355 999999776431221
Q ss_pred -EEEEEeCCC-CCcEEc
Q 014058 220 -AFVYWSWDF-IHWTKL 234 (431)
Q Consensus 220 -i~ly~S~Dl-~~W~~~ 234 (431)
..-++|+.| -.|+..
T Consensus 214 Yfrs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 214 YFRSWTATSLDGPWTPL 230 (303)
T ss_pred eEEEEEcCCCCCCceec
Confidence 122666766 378865
No 74
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=96.82 E-value=0.034 Score=55.45 Aligned_cols=115 Identities=17% Similarity=0.238 Sum_probs=70.5
Q ss_pred EEEccCCeEEEEEeeccCC---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEE
Q 014058 133 VTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVL 209 (431)
Q Consensus 133 av~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~ 209 (431)
.++..+|+++|||--+... +...-++|+|+|. ++|+..+ ++|.+....+....--..++.. +++++|+
T Consensus 14 G~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~~--~aL~P~~~~d~~g~~SGs~~~~--~~~~~~~ 84 (308)
T PF00251_consen 14 GLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDL-----VHWEHLP--VALPPDEEYDADGCFSGSAVVD--DDNLVLF 84 (308)
T ss_dssp EEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSS-----SSEEEEE--EEE-SSSGGGTTEEEEEEEEEE--TTCEEEE
T ss_pred cCeEeCCEEEEEeccCCCCcccceeEEEEEECCCC-----CCceeCC--ceEcccccCCcCccCcceEEEE--CCEEEEE
Confidence 3444699999999765421 3456789999995 8999863 5665443322222334444433 4578888
Q ss_pred EeeeeCC-cceEEEEEe-CCCCCcEEcc--cccccC---CCCCceeeCcEEEec
Q 014058 210 VGGQIDN-EGMAFVYWS-WDFIHWTKLD--HPLYSV---QETGMWECPDIFPVS 256 (431)
Q Consensus 210 ~ga~~~~-~G~i~ly~S-~Dl~~W~~~~--~~l~~~---~~~~~wECPdlf~l~ 256 (431)
+.+.... .....++.| +|+.+|+... .++... .....+.=|.+|...
T Consensus 85 YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~ 138 (308)
T PF00251_consen 85 YTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRE 138 (308)
T ss_dssp EEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEEC
T ss_pred EeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEec
Confidence 8776532 334556677 8899999854 344331 233467788886555
No 75
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.74 E-value=0.067 Score=51.73 Aligned_cols=161 Identities=16% Similarity=0.099 Sum_probs=85.3
Q ss_pred CEEEEEEEECCCCCCCCCcceEEEEEe--CCC-ccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEeeccCC---
Q 014058 78 GVYHLFYQYNPLGPLFGDKMIWAHSVS--YDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS--- 151 (431)
Q Consensus 78 G~YHlFyq~~P~~~~wg~~~~WgHa~S--~Dl-v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~--- 151 (431)
|+...++.. +...+ .....-..| +|. .+|.....+..+. .....+..++++.+++|+++|+|+.....
T Consensus 1 G~l~a~~~~---~~~~~-~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~ 74 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEG-AIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGW 74 (275)
T ss_dssp SEEEEEEEE---SSCSC-CEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESC
T ss_pred CeEEEEEEC---CcccC-CCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCC
Confidence 556666665 23333 344444555 987 7899865544443 12245667777777799999999544321
Q ss_pred CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEe-CCCCC
Q 014058 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS-WDFIH 230 (431)
Q Consensus 152 ~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S-~Dl~~ 230 (431)
........+|+|+| ++|+... .|...+........+.+- +-. .+|++++..-........+.++.| ++.+.
T Consensus 75 ~~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~t 146 (275)
T PF13088_consen 75 SGSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGKT 146 (275)
T ss_dssp CTCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTSS
T ss_pred CceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCce
Confidence 12222348899976 7999753 333221111112233332 223 478777763222222344455555 55689
Q ss_pred cEEcccccccCCCCCceeeCcEEEec
Q 014058 231 WTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 231 W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
|+.... .. .....-.|.+++++
T Consensus 147 W~~~~~-~~---~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 147 WSSGSP-IP---DGQGECEPSIVELP 168 (275)
T ss_dssp EEEEEE-CE---CSEEEEEEEEEEET
T ss_pred eecccc-cc---ccCCcceeEEEECC
Confidence 987543 22 11122345666666
No 76
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.55 E-value=0.039 Score=54.86 Aligned_cols=80 Identities=11% Similarity=0.114 Sum_probs=49.0
Q ss_pred CeEeecEEEccCCeEEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCe
Q 014058 127 SCWSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (431)
Q Consensus 127 gv~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~ 205 (431)
++.-|+.+...+|+++|+|++.... ....+.+|+|++.- ..|++...+||+..+.+. ...--... ++.+.+|+
T Consensus 159 ~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~----GP~~~~~~~pil~~~~~~-~~g~GH~s-~v~~~~G~ 232 (295)
T cd08982 159 PWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPL----GPFTYQPHNPFSYKPGGF-ITGAGHGS-TFQDKYGN 232 (295)
T ss_pred ccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCC----CCCCcCCCCccccCCCCe-EecCCccc-EEECCCCC
Confidence 3556777777899999999864322 33457789987764 456766568887543220 01111223 34556788
Q ss_pred EEEEEee
Q 014058 206 WRVLVGG 212 (431)
Q Consensus 206 ~~M~~ga 212 (431)
|++++=+
T Consensus 233 ~~~~yh~ 239 (295)
T cd08982 233 YWHVGTM 239 (295)
T ss_pred EEEEEEE
Confidence 8887633
No 77
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=95.48 E-value=2.9 Score=42.01 Aligned_cols=147 Identities=14% Similarity=0.122 Sum_probs=82.1
Q ss_pred cceEEEEEeCCC-ccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEeeccCC----------CceeEEEEEecCC
Q 014058 96 KMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS----------GQQVQNLAMPENL 164 (431)
Q Consensus 96 ~~~WgHa~S~Dl-v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----------~~~~q~lA~S~D~ 164 (431)
.+....++|+|. .+|..... +..... ....+..++.+.+.+|+++|||...... ....+.+..|+|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~~~-i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPSTV-ISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCcccccEE-ehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 355777888875 89998643 333322 2345778888876449999999765421 2345677889887
Q ss_pred CCCccceeeeecCCcEEcCC--CCCCCCCccCCe-EEEecCCCeEEEEEeeeeCC--cceEEEEEeCCCCCcEEcccccc
Q 014058 165 SDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDPT-TAWQAPDGRWRVLVGGQIDN--EGMAFVYWSWDFIHWTKLDHPLY 239 (431)
Q Consensus 165 ~d~~l~~w~k~~~~Pvi~~p--~~~~~~~~RDP~-Vv~~~~~g~~~M~~ga~~~~--~G~i~ly~S~Dl~~W~~~~~~l~ 239 (431)
+ .+|.+. ..+.... ..+ ..-++-|- .+-. ++|+++|-+-..... .-..++|..++.+.|+.. ....
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~l-~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~-~~~~ 193 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQM-KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLG-EGVN 193 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEEe-cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEEC-CCCC
Confidence 6 799863 2222211 111 11223331 1222 378887766443321 223445555667999863 2221
Q ss_pred cCCCCCceeeCcEEEec
Q 014058 240 SVQETGMWECPDIFPVS 256 (431)
Q Consensus 240 ~~~~~~~wECPdlf~l~ 256 (431)
. ...+.| |.++++.
T Consensus 194 ~--~~~~~e-~~i~el~ 207 (351)
T cd00260 194 D--AGGCSE-CSVVELS 207 (351)
T ss_pred C--CCCCcC-CEEEEec
Confidence 1 133445 7788996
No 78
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=94.63 E-value=0.65 Score=46.58 Aligned_cols=145 Identities=17% Similarity=0.200 Sum_probs=69.5
Q ss_pred CCCcceEECCEEEEEE-EECCCCCCCCCcceEEEEEeCCC-ccceecccccCCC-CccCCCCeE--eecEEEccCCeEEE
Q 014058 69 DPNGPMYYKGVYHLFY-QYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPS-GPYDINSCW--SGSVTILPGDKPFI 143 (431)
Q Consensus 69 DPnG~i~~~G~YHlFy-q~~P~~~~wg~~~~WgHa~S~Dl-v~W~~~~~aL~P~-~~~D~~gv~--SGsav~~~dg~~~l 143 (431)
.|- .+..++..+|+. .|+... ... ....-++.|+|- +.|.+........ .... ... -||.|+.+||++++
T Consensus 62 rPT-tvvkgn~IymLvG~y~~~~-~~~-~~~llLvks~~~g~~W~~~~~l~~~~~~~~~--~figgGGSGV~m~dGTLVF 136 (310)
T PF13859_consen 62 RPT-TVVKGNKIYMLVGSYSRSA-GAD-DWGLLLVKSTDGGIKWGDTKSLPSTSFQSWK--QFIGGGGSGVVMEDGTLVF 136 (310)
T ss_dssp EEE-EEEETTEEEEEEEEESS---SST-TEEEEEEEEESSSSEE---EE-GGGS-EEEE--EEEE-SEE-EE-TTS-EEE
T ss_pred eee-eeecceeEEEEEEEEeccc-ccc-ccceeeeeccCCcceeeecccCCchhccccc--eeecCCCCceEEcCCCEEE
Confidence 444 334466666665 555322 111 222345566654 6898753221111 1101 111 24456667998877
Q ss_pred EEeeccCCCc-eeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEE
Q 014058 144 LYTGIDASGQ-QVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (431)
Q Consensus 144 ~YTg~~~~~~-~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~l 222 (431)
=-.+...+.. ..-.|.+|+|.+ .+|+=..+ ......+||.|+-. ++|+-.|+.... .|+-.+
T Consensus 137 Pv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg---------~s~~gC~~psv~EW-e~gkLlM~~~c~---~g~rrV 199 (310)
T PF13859_consen 137 PVQATKKNGDGTVSLIIYSTDDG----KTWKLSKG---------MSPAGCSDPSVVEW-EDGKLLMMTACD---DGRRRV 199 (310)
T ss_dssp EEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE--TTEEEEEEE-T---TS---E
T ss_pred EEeeeccCccceEEEEEEECCCc----cceEeccc---------cCCCCcceEEEEec-cCCeeEEEEecc---cceEEE
Confidence 6666554444 366688999865 68974322 11245689998755 578888876542 244468
Q ss_pred EEeCCC-CCcEEcc
Q 014058 223 YWSWDF-IHWTKLD 235 (431)
Q Consensus 223 y~S~Dl-~~W~~~~ 235 (431)
|+|.|. ..|+..-
T Consensus 200 YeS~DmG~tWtea~ 213 (310)
T PF13859_consen 200 YESGDMGTTWTEAL 213 (310)
T ss_dssp EEESSTTSS-EE-T
T ss_pred EEEcccceehhhcc
Confidence 999886 7899753
No 79
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=92.66 E-value=2.3 Score=45.38 Aligned_cols=150 Identities=15% Similarity=0.133 Sum_probs=77.1
Q ss_pred cCCCCccCCCcceEECCEEEEEEEECCCCC-CCCCcceEEEEEeCC-CccceecccccCCCCccCCCCeEeecEEEccCC
Q 014058 62 PPQNWINDPNGPMYYKGVYHLFYQYNPLGP-LFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGD 139 (431)
Q Consensus 62 p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~-~wg~~~~WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg 139 (431)
|..|=+.-|. ++|+||+|+|+|.-.+... .|- +++--..+.++ .=.|.+. +.+ +.. +.+..|.+.|+||
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k-~~~nyl~t~~s~~G~WsDp-i~l-~~~-----~~iDPslf~D~dG 156 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYK-NAGNYLVTAESIDGPWSDP-IKL-NGS-----NAIDPSLFFDKDG 156 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCccc-ccccEEEEecCCCCCcccc-eec-CCc-----CccCCceeecCCC
Confidence 4555566777 8899999999995444322 122 22222233233 2356652 212 221 2466889999999
Q ss_pred eEEEEEeeccCC--CceeEEEEEecCCCCCccceeeeecC--CcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-
Q 014058 140 KPFILYTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSG--NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI- 214 (431)
Q Consensus 140 ~~~l~YTg~~~~--~~~~q~lA~S~D~~d~~l~~w~k~~~--~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~- 214 (431)
+.+|+|-+.+.. ....-.+-.+... .+=.|..+ -.++-. +.+..-..-|. +++ ++|-|||+.+...
T Consensus 157 r~wlv~~~w~~~~~~~~~~~i~l~~~~-----~~~~~l~g~~~~~~~~--G~~~~~~EGPh-l~k-~~gYYYL~~a~gG~ 227 (549)
T COG3507 157 RKWLVNGSWDGGIFMHSFAGIILQEYD-----KTTQKLVGQGYKIIFD--GGNGGLTEGPH-LYK-KTGYYYLYVAEGGL 227 (549)
T ss_pred CEEEEecccCCCcccccccceeeeecc-----ccccccCCccceeEec--cCCCccccCce-eec-cCCEEEEEEEcCCC
Confidence 999999887642 1111111112111 00011111 111211 11112334575 566 6888888887654
Q ss_pred CCcc-eEEEEEeCCCC
Q 014058 215 DNEG-MAFVYWSWDFI 229 (431)
Q Consensus 215 ~~~G-~i~ly~S~Dl~ 229 (431)
...| .+.++||+.+.
T Consensus 228 t~~gh~~~vaRSKsid 243 (549)
T COG3507 228 TTYGHAIRVARSKSID 243 (549)
T ss_pred CccceeEEEEeccCCC
Confidence 3334 46788998764
No 80
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=90.25 E-value=11 Score=39.45 Aligned_cols=129 Identities=12% Similarity=0.182 Sum_probs=81.2
Q ss_pred CCEEEEEEEECCCC-CCCCC----cceEEEEEeCC----CccceecccccCCCCccCC-------CCeEeecEEEc-cCC
Q 014058 77 KGVYHLFYQYNPLG-PLFGD----KMIWAHSVSYD----LINWIHLSHALCPSGPYDI-------NSCWSGSVTIL-PGD 139 (431)
Q Consensus 77 ~G~YHlFyq~~P~~-~~wg~----~~~WgHa~S~D----lv~W~~~~~aL~P~~~~D~-------~gv~SGsav~~-~dg 139 (431)
+|+-.|||.....+ ..-.. ...-|++.+.| +-.|+.+.+.+.|++.+-+ ...-.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999884321 10000 23456777777 5578888788888864321 23456777776 589
Q ss_pred eEEEEEeeccCC--------------------------------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCC
Q 014058 140 KPFILYTGIDAS--------------------------------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (431)
Q Consensus 140 ~~~l~YTg~~~~--------------------------------~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~ 187 (431)
+.||+|.|+... ....++||..++.. ...|+-+ .|+|....
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~~-- 295 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSANG-- 295 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEETT--
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceeccc--
Confidence 999999887531 01246788887653 2568876 48886432
Q ss_pred CCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 188 KDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 188 ~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
-.....-|.||++ +|+||++..++.
T Consensus 296 v~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 296 VNDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp TBS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred ccccccCCcEEEE--CCEEEEEEEecc
Confidence 1234566997766 899999998875
No 81
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=87.42 E-value=18 Score=36.44 Aligned_cols=157 Identities=13% Similarity=0.130 Sum_probs=86.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCC----CCCCCCcceEEEEEeCC-CccceecccccCCCCccCCCCe------EeecE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPL----GPLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSC------WSGSV 133 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~----~~~wg~~~~WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv------~SGsa 133 (431)
...-=|.+.|-.+|+-+|.|+..-. ...|. ...=+.+.|+| ..+|+..+..+.+....- .|+ |.=++
T Consensus 92 e~t~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~-tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a 169 (316)
T PF13810_consen 92 ETTVIPTDGISVGGRQYLHYMSVRNWGNVPGSWT-TNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAA 169 (316)
T ss_pred ceEEcccceEEECCcEEEEEEEEccCCCCCCccc-cCceEEEEeCCCCCCceeCCCccccccccc-CCcccccccccccc
Confidence 3444588888999999999987521 11233 23457889999 589999986665554111 111 22223
Q ss_pred EEccCCeEEEEEeeccCCCceeEEEEEe-cC-CCCCc------cce--eeeecC--CcEEcCCCCCCCCCccCCeEEEec
Q 014058 134 TILPGDKPFILYTGIDASGQQVQNLAMP-EN-LSDPL------LKD--WVKFSG--NPVMTPPNGVKDDMFRDPTTAWQA 201 (431)
Q Consensus 134 v~~~dg~~~l~YTg~~~~~~~~q~lA~S-~D-~~d~~------l~~--w~k~~~--~Pvi~~p~~~~~~~~RDP~Vv~~~ 201 (431)
....||-.|+|=|...+ .....||.. .+ -.|.. ... |.+... .||+..+ +---.|.|.+
T Consensus 170 ~~~~dgyVYv~gt~~~R--~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~-------vgElSv~~~~ 240 (316)
T PF13810_consen 170 FVKDDGYVYVYGTPFGR--NGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP-------VGELSVRYNE 240 (316)
T ss_pred ccCCCCEEEEEeCCCCC--CCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC-------ccceEEEEeC
Confidence 33345655555554332 222234422 11 11100 012 544211 3555332 2234567777
Q ss_pred CCCeEEEEEeeeeCCcceEEEEEeCCCC-CcEEc
Q 014058 202 PDGRWRVLVGGQIDNEGMAFVYWSWDFI-HWTKL 234 (431)
Q Consensus 202 ~~g~~~M~~ga~~~~~G~i~ly~S~Dl~-~W~~~ 234 (431)
..|+|+|+.... ..+.|.+.++++.. .|+..
T Consensus 241 ~~gk~Vl~~~~~--~~~~I~~RtA~~P~GpWs~~ 272 (316)
T PF13810_consen 241 YLGKWVLSYFDA--GTGGIVLRTAPSPTGPWSEP 272 (316)
T ss_pred CCCEEEEEEecc--cCCcEEEEecCCCCCCCCCC
Confidence 789999998643 33567888888876 58743
No 82
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=84.64 E-value=15 Score=39.17 Aligned_cols=98 Identities=14% Similarity=0.144 Sum_probs=58.4
Q ss_pred EccCCeEEEEEeeccC---CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEe
Q 014058 135 ILPGDKPFILYTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (431)
Q Consensus 135 ~~~dg~~~l~YTg~~~---~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~g 211 (431)
+..+|++++||--+.. .+...=++|+|+|. .+|+.. .+++.|...++.....--.+|-. .++.+.|+-|
T Consensus 48 iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~--piaL~Pd~~~d~~g~ySGSAV~~-~~~l~lfytg 119 (486)
T COG1621 48 IYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDL-----VHWEHL--PIALAPDDDYDSHGCYSGSAVVD-DGNLSLFYTG 119 (486)
T ss_pred eEECCEEEEEEecCCCCCCCCCceeeeeccCCc-----ccceEC--CceecCCCccccCCceeeeEEEe-CCcEEEEEcc
Confidence 3458999999986532 13344568999884 899974 23454444334444444444433 3566777766
Q ss_pred eeeC---Ccc-eEEEEEeCCCCCcEE-ccccccc
Q 014058 212 GQID---NEG-MAFVYWSWDFIHWTK-LDHPLYS 240 (431)
Q Consensus 212 a~~~---~~G-~i~ly~S~Dl~~W~~-~~~~l~~ 240 (431)
...+ .+. .=.+..|+|..++++ .+.++..
T Consensus 120 ~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~ 153 (486)
T COG1621 120 NVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIID 153 (486)
T ss_pred ceeccCCcceeEEEEEEEcCCCceEeccCCceec
Confidence 5542 122 224678888888877 3555543
No 83
>PTZ00334 trans-sialidase; Provisional
Probab=83.77 E-value=11 Score=42.48 Aligned_cols=124 Identities=18% Similarity=0.179 Sum_probs=70.3
Q ss_pred CCCcceEEEEEeC-----CCccceecccccCCCC-c--cCC-CCe--EeecEEEccCCeEEEEEeeccCCCceeEEEEEe
Q 014058 93 FGDKMIWAHSVSY-----DLINWIHLSHALCPSG-P--YDI-NSC--WSGSVTILPGDKPFILYTGIDASGQQVQNLAMP 161 (431)
Q Consensus 93 wg~~~~WgHa~S~-----Dlv~W~~~~~aL~P~~-~--~D~-~gv--~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S 161 (431)
|+-....|+++-. .-|.|.+. ..|.... . ... .+. --||.|+..||.+++==.+...++...-.|.+|
T Consensus 215 ~~l~Lv~G~Vt~~~~~~~k~I~W~~~-~~l~~~~~~~~~~~l~~~iggGGSGI~medGTLVFPv~a~~~~g~~vslIiYS 293 (780)
T PTZ00334 215 WGLLVAVGNVSNDGSSGKKKIYWKDA-SVIPWTDFEKQHESLTRLIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYS 293 (780)
T ss_pred CccEEEEEEeecCCCCCcceEECcCc-ccCCccccccccccceeecCCCcCeEEecCCeEEEEEEEEcCCCCEEEEEEEe
Confidence 4435677888632 24999773 2331111 1 010 011 124556667998776545544445555567889
Q ss_pred cCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCC-CCcEEcc
Q 014058 162 ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF-IHWTKLD 235 (431)
Q Consensus 162 ~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl-~~W~~~~ 235 (431)
+|.+ +|+ .+. +......+||.|+-. ++|+-.|+.... + |+=.+|+|.|. ..|+..-
T Consensus 294 ~d~g-----~W~-ls~--------g~s~~gC~~P~I~EW-e~gkLlM~t~C~-d--G~RrVYES~DmG~tWtEAl 350 (780)
T PTZ00334 294 SATE-----SGN-LSK--------GMSADGCSDPSVVEW-KEGKLMMMTACD-D--GRRRVYESGDKGDSWTEAL 350 (780)
T ss_pred cCCC-----CeE-EcC--------CCCCCCCCCCEEEEE-cCCeEEEEEEeC-C--CCEEEEEECCCCCChhhCC
Confidence 8863 585 221 112245789997755 467877766543 2 33358999886 7898653
No 84
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=81.73 E-value=53 Score=31.89 Aligned_cols=142 Identities=14% Similarity=0.264 Sum_probs=69.9
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCCcc---ceecccccCCCCc-cCCCCeEeecEEEccCCeEE
Q 014058 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN---WIHLSHALCPSGP-YDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 69 DPnG~i~~--~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~---W~~~~~aL~P~~~-~D~~gv~SGsav~~~dg~~~ 142 (431)
-|. ++|+ +..|.|.||+.| ......||+|.-+ |....+ |..+.. ....|...-- |+-++-..|
T Consensus 78 AP~-vFYFaPk~~W~L~yQwg~--------~~fsY~Ts~DptnpngWSapq~-lf~g~i~~~~~g~iD~~-vI~D~~n~y 146 (271)
T PF03664_consen 78 APQ-VFYFAPKNIWYLAYQWGP--------AAFSYSTSSDPTNPNGWSAPQP-LFSGSISGSGTGPIDQW-VICDDTNMY 146 (271)
T ss_pred cce-EEEecCCcEEEEEEecCC--------CcceeecCCCCCCCccCCCCcc-cccccccCCCCCceeeE-EEecCCceE
Confidence 455 6776 789999999743 3356678888753 765433 322221 1112322332 333466789
Q ss_pred EEEeeccCCCceeEEEEEecCCCCCccceeeee-cCCcEEcCCCCCCCCCccCCeEEEec-CCCeEEEEEeeeeCCcce-
Q 014058 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF-SGNPVMTPPNGVKDDMFRDPTTAWQA-PDGRWRVLVGGQIDNEGM- 219 (431)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~-~~~Pvi~~p~~~~~~~~RDP~Vv~~~-~~g~~~M~~ga~~~~~G~- 219 (431)
||+++-+ ++..+-...+ .+|-.. ...+++...+. ...-|.-+. |++- ..++|.|++=+... .|+
T Consensus 147 LFfa~Dn-GkiYRs~~~i---------~nFP~~fgs~~~vvmsd~-~~nLFEA~~-VYkv~G~~~YLmiVEaiGs-~gRy 213 (271)
T PF03664_consen 147 LFFAGDN-GKIYRSSMPI---------GNFPGGFGSSYTVVMSDT-RNNLFEAVQ-VYKVKGQNQYLMIVEAIGS-DGRY 213 (271)
T ss_pred EEEcCCC-CcEEEeccch---------hhCCCCCCCceEEEEecC-ccceeeeeE-EEEEcCCceEEEEEEEecC-CCcE
Confidence 9999754 2222211111 122111 11233311111 123566666 4553 34789999866542 332
Q ss_pred EEEEEeCCC-CCcEEc
Q 014058 220 AFVYWSWDF-IHWTKL 234 (431)
Q Consensus 220 i~ly~S~Dl-~~W~~~ 234 (431)
..-++|..| -.|+-.
T Consensus 214 FRSfTa~sL~G~Wtp~ 229 (271)
T PF03664_consen 214 FRSFTATSLDGPWTPQ 229 (271)
T ss_pred EEeeecCCCCCcceec
Confidence 223334555 367654
No 85
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=76.15 E-value=20 Score=38.16 Aligned_cols=90 Identities=21% Similarity=0.321 Sum_probs=54.3
Q ss_pred cCCeEEEEEeeccCC---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCC-CCCccCCeEEEecCCCeEEEEEee
Q 014058 137 PGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVK-DDMFRDPTTAWQAPDGRWRVLVGG 212 (431)
Q Consensus 137 ~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~-~~~~RDP~Vv~~~~~g~~~M~~ga 212 (431)
.+|.++|||.-+..+ +...=++|+|+|. ++|+.++ |-|.|....+ ...|---.|| . .+|+=.|++..
T Consensus 68 ykG~yHLFyQyNP~gavwg~ivWGHavSkDL-----inW~~lp--~Ai~Ps~~~ding~wSGSati-~-~~~~~vilytg 138 (571)
T KOG0228|consen 68 YKGKYHLFYQYNPKGAVWGNIVWGHAVSKDL-----INWEALP--PAIAPSEWFDINGCWSGSATI-D-PNNSPVILYTG 138 (571)
T ss_pred cCcEEEEEEecCCCCceeeeeEeeeecchhh-----ccccccC--cccCCCCccccCccccceEEE-c-cCCCeEEEecc
Confidence 599999999866442 3455578999984 8999763 5554433111 1233333332 2 46777777766
Q ss_pred eeCCcceEEEEEe-CC-----CCCcEEcc
Q 014058 213 QIDNEGMAFVYWS-WD-----FIHWTKLD 235 (431)
Q Consensus 213 ~~~~~G~i~ly~S-~D-----l~~W~~~~ 235 (431)
......++..|.- .| |+.|...+
T Consensus 139 ~d~~~rqVqn~a~p~d~sdp~l~~w~k~~ 167 (571)
T KOG0228|consen 139 IDPNNRQVQNYAYPKDVSDPQLIAWSKDG 167 (571)
T ss_pred cCcCceEEEEEeccCCCCchhhheeecCC
Confidence 5544566777753 22 46776644
No 86
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=75.57 E-value=76 Score=30.23 Aligned_cols=160 Identities=21% Similarity=0.334 Sum_probs=89.2
Q ss_pred cCCCCccCCCcceEECCEEEEEEEECCCCCCC-C---CcceEEEEEeCCCc--cceecccccCCCCccCCCCeEeecEE-
Q 014058 62 PPQNWINDPNGPMYYKGVYHLFYQYNPLGPLF-G---DKMIWAHSVSYDLI--NWIHLSHALCPSGPYDINSCWSGSVT- 134 (431)
Q Consensus 62 p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~w-g---~~~~WgHa~S~Dlv--~W~~~~~aL~P~~~~D~~gv~SGsav- 134 (431)
|-++.+.-|. +-+.+|+|++||...|....- | ++|.--...+.|-+ +|.+.+....+=+. ||=-|.
T Consensus 65 pms~liwape-ih~ingkwyiyfaaa~ta~~k~g~f~hrmfvlene~anpltg~w~ekgqikt~wes------fsldatt 137 (324)
T COG3940 65 PMSNLIWAPE-IHFINGKWYIYFAAAPTANIKDGTFNHRMFVLENENANPLTGNWVEKGQIKTAWES------FSLDATT 137 (324)
T ss_pred chhhcccccc-eeEEcceEEEEEeecCcccccccccceeEEEEecCCCCCCcccceecceeccchhc------ceeeeee
Confidence 3444556676 567899999999988864321 1 13333333344543 68877655444332 222222
Q ss_pred EccCCeEEEEEeeccC--CCceeEEEEEecCCCCCccceeeeecCCcEEc-CC-CCCCCCCc---cCCeEEEecCCCeEE
Q 014058 135 ILPGDKPFILYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMT-PP-NGVKDDMF---RDPTTAWQAPDGRWR 207 (431)
Q Consensus 135 ~~~dg~~~l~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~-~p-~~~~~~~~---RDP~Vv~~~~~g~~~ 207 (431)
..++|+.++.+...+. .+...+.+|-..+ .|+-. +.||+- .| -+|+...| .-|.|+- .+|+-+
T Consensus 138 feh~gk~yyvwaqkdp~i~gnsniyiaemen-------pwtik-gepvmlskpe~dwe~~gfwvnegpav~k--~ngkif 207 (324)
T COG3940 138 FEHNGKLYYVWAQKDPNIKGNSNIYIAEMEN-------PWTIK-GEPVMLSKPELDWEIKGFWVNEGPAVLK--KNGKIF 207 (324)
T ss_pred eeeCCEEEEEEeccCCCccCCcceEEEeccC-------Cceec-CceEEecCCCcccEEEEEEecCCceEEE--ECCEEE
Confidence 2368887777765443 3556677887654 47743 578883 33 23433333 3677653 377777
Q ss_pred EEEeeee-CCcceEEEE---EeCCCC---CcEEccccc
Q 014058 208 VLVGGQI-DNEGMAFVY---WSWDFI---HWTKLDHPL 238 (431)
Q Consensus 208 M~~ga~~-~~~G~i~ly---~S~Dl~---~W~~~~~~l 238 (431)
+.+.+.. +..=|+.+. .-.||. +|+....|+
T Consensus 208 i~ysasatd~nycmgllwanen~dlldpaswtksptpv 245 (324)
T COG3940 208 ITYSASATDVNYCMGLLWANENSDLLDPASWTKSPTPV 245 (324)
T ss_pred EEEeccccccceeeeeeeecccCCcCCchhcccCCCcc
Confidence 7776654 332233333 345554 798755444
No 87
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=68.84 E-value=26 Score=35.25 Aligned_cols=92 Identities=13% Similarity=0.302 Sum_probs=51.9
Q ss_pred cCCeEEEEEeeccCCC-------ceeEEEEEecCCCCCccceeeeecCCcEEcCC---CCCCCCCccCCeEEEecCCCeE
Q 014058 137 PGDKPFILYTGIDASG-------QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP---NGVKDDMFRDPTTAWQAPDGRW 206 (431)
Q Consensus 137 ~dg~~~l~YTg~~~~~-------~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p---~~~~~~~~RDP~Vv~~~~~g~~ 206 (431)
.+|+.+|.|..+..-+ .....||+|+|.+ .+|++.+. .+-... .+...........-+. .++.|
T Consensus 103 v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~~-~~~~~~~~~~g~~~~~~~fq~~a~~-~~dgy 176 (316)
T PF13810_consen 103 VGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVPG-TIRPNSPFHPGFNQGNWNFQMAAFV-KDDGY 176 (316)
T ss_pred ECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCCC-cccccccccCCcccccccccccccc-CCCCE
Confidence 4889999999875311 2246799999976 79998642 222221 1111000111111122 35568
Q ss_pred EEEEeeeeCCcceEEEEEe-----CCCCCcEEc
Q 014058 207 RVLVGGQIDNEGMAFVYWS-----WDFIHWTKL 234 (431)
Q Consensus 207 ~M~~ga~~~~~G~i~ly~S-----~Dl~~W~~~ 234 (431)
+-++|......|.+.|+|- .|+..|++-
T Consensus 177 VYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw 209 (316)
T PF13810_consen 177 VYVYGTPFGRNGGVYLARVPPDDILDRSAYEYW 209 (316)
T ss_pred EEEEeCCCCCCCcEEEEEeCHHHCCChhhcccc
Confidence 7778876555666788885 355566654
No 88
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=45.53 E-value=16 Score=30.09 Aligned_cols=13 Identities=31% Similarity=0.363 Sum_probs=7.9
Q ss_pred cCchhHHHHHHHH
Q 014058 9 MTSPALMVLLCCF 21 (431)
Q Consensus 9 ~~~~~~~~~~~~~ 21 (431)
|+|.++++|.++|
T Consensus 1 MaSK~~llL~l~L 13 (95)
T PF07172_consen 1 MASKAFLLLGLLL 13 (95)
T ss_pred CchhHHHHHHHHH
Confidence 6677666655443
No 89
>PF02012 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Members of this entry contain multiple BNR (bacterial neuraminidase repeat) repeats or Asp-boxes. The repeats are short, however the repeats are never found closer than 40 residues together suggesting that the repeat is structurally longer. These repeats are found in a variety of non-homologous proteins, including bacterial ribonucleases, sulphite oxidases, reelin, netrins, sialidases, neuraminidases, some lipoprotein receptors, and a variety of glycosyl hydrolases [].; PDB: 2JKB_A 2VW0_A 2VW2_A 2VW1_A 2CN2_D 2CN3_B 2VK7_B 2VK5_A 2VK6_A 2BF6_A ....
Probab=26.70 E-value=52 Score=16.78 Aligned_cols=11 Identities=27% Similarity=0.522 Sum_probs=6.9
Q ss_pred EecCCCCCccceeee
Q 014058 160 MPENLSDPLLKDWVK 174 (431)
Q Consensus 160 ~S~D~~d~~l~~w~k 174 (431)
+|+|+| .+|++
T Consensus 2 ~S~D~G----~TW~~ 12 (12)
T PF02012_consen 2 YSTDGG----KTWKK 12 (12)
T ss_dssp EESSTT----SS-EE
T ss_pred EeCCCc----ccCcC
Confidence 577876 78874
No 90
>smart00815 AMA-1 Apical membrane antigen 1. Apical membrane antigen 1 (AMA-1) is a Plasmodium asexual blood-stage antigen. It has been suggested that positive selection operates on the AMA-1 gene in regions coding for antigenic sites.
Probab=23.85 E-value=85 Score=30.16 Aligned_cols=61 Identities=23% Similarity=0.299 Sum_probs=36.8
Q ss_pred CCCccCCeEEEecCCCeEEEEE-eeeeCC---------cc-----eEEEEEeCCCCCcEEcccccccCCCCCcee--eCc
Q 014058 189 DDMFRDPTTAWQAPDGRWRVLV-GGQIDN---------EG-----MAFVYWSWDFIHWTKLDHPLYSVQETGMWE--CPD 251 (431)
Q Consensus 189 ~~~~RDP~Vv~~~~~g~~~M~~-ga~~~~---------~G-----~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wE--CPd 251 (431)
...+|-|+ ||+..+..=||+. .++.+. .+ |....+|.+.++|.|.+..+-. -|| ||
T Consensus 120 ns~YR~Pa-VYD~k~~~C~ILy~~~Qen~G~ryC~~~~~~~~~~~Cf~P~Ks~~~knl~Y~Ss~vr~-----Dwe~kCP- 192 (240)
T smart00815 120 NSKYRYPF-VYDSDDKLCYILYVAAQENQGPRYCSNDEEGTSSLFCFKPDKSKEDAHLYYGSKNVRD-----DWEEVCP- 192 (240)
T ss_pred Cceeecce-EEcCCCCeEEEeehhhhhccCCcccccCCCCCccceeccccccccccceeeeeccccc-----chhhhCc-
Confidence 46899999 5776666545554 444311 11 3334467788899987654421 165 99
Q ss_pred EEEec
Q 014058 252 IFPVS 256 (431)
Q Consensus 252 lf~l~ 256 (431)
-++|.
T Consensus 193 r~pLk 197 (240)
T smart00815 193 RKPLR 197 (240)
T ss_pred ccccc
Confidence 66775
No 91
>PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
Probab=22.32 E-value=2.7e+02 Score=30.20 Aligned_cols=53 Identities=21% Similarity=0.324 Sum_probs=35.6
Q ss_pred CCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEeec
Q 014058 77 KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (431)
Q Consensus 77 ~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 148 (431)
.|.=+|-.|+.|.- .....+--|.|-|+....- .|++.+|. .++.+||.|--.
T Consensus 57 agvkylq~q~~~~v-------~ihk~veg~iviwen~~~p-----------lyt~aivt-~n~~pymayve~ 109 (943)
T PTZ00449 57 AGVKYLQLQHGPGV-------NIHKLVEGDIVIWENAEMP-----------LYTCAIVT-NNDGPYMAYVEL 109 (943)
T ss_pred ccceeEEeecCCCc-------ceeEeeeccEEEEecCCCc-----------ceeEEEEe-cCCCCeeeeeee
Confidence 57777888887743 3444777889999875433 37776654 466677777654
No 92
>smart00602 VPS10 VPS10 domain.
Probab=21.64 E-value=8.8e+02 Score=26.66 Aligned_cols=30 Identities=20% Similarity=0.152 Sum_probs=22.0
Q ss_pred CCCCCccccccccEEEEEecCCCeEEecch
Q 014058 349 DIDKGWSGVQTVPRAIWLDKSGKQLVQWPV 378 (431)
Q Consensus 349 ~~~~gW~g~lslPR~L~l~~~G~~L~q~Pv 378 (431)
+...-|.-++--|........|..|+..|.
T Consensus 382 DgG~tW~~~~~~~~~~~~gD~G~iivav~~ 411 (612)
T smart00602 382 DGGLTWRLVFDGPHLYAYGDHGGIIVAIEY 411 (612)
T ss_pred CCCcchHhhcCCceeEEecCCccEEEEEcC
Confidence 446689988888998888766766665543
No 93
>PF15240 Pro-rich: Proline-rich
Probab=20.13 E-value=67 Score=29.62 Aligned_cols=19 Identities=26% Similarity=0.394 Sum_probs=12.5
Q ss_pred HHHHHHHHHhHhcCccccc
Q 014058 14 LMVLLCCFLLIANGAHQSE 32 (431)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~ 32 (431)
|+|+||+.+||+++++|+.
T Consensus 1 MLlVLLSvALLALSSAQ~~ 19 (179)
T PF15240_consen 1 MLLVLLSVALLALSSAQST 19 (179)
T ss_pred ChhHHHHHHHHHhhhcccc
Confidence 4566666777777776654
Done!