Query 014059
Match_columns 431
No_of_seqs 237 out of 1182
Neff 4.5
Searched_HMMs 46136
Date Fri Mar 29 01:27:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014059.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014059hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1379 Serine/threonine prote 100.0 1.1E-37 2.3E-42 308.7 16.0 238 188-430 2-258 (330)
2 COG0631 PTC1 Serine/threonine 100.0 1.2E-29 2.7E-34 246.4 17.1 164 258-431 7-208 (262)
3 PRK14559 putative protein seri 99.9 9.9E-27 2.2E-31 250.9 18.2 162 259-430 375-585 (645)
4 PLN03145 Protein phosphatase 2 99.9 3.8E-25 8.2E-30 225.1 16.4 161 258-431 64-282 (365)
5 cd00143 PP2Cc Serine/threonine 99.9 9.5E-24 2.1E-28 195.5 15.1 160 262-431 3-208 (254)
6 smart00332 PP2Cc Serine/threon 99.9 1.1E-22 2.3E-27 189.8 14.5 157 265-431 11-211 (255)
7 PTZ00224 protein phosphatase 2 99.9 1E-21 2.2E-26 201.2 18.2 153 261-430 24-221 (381)
8 PF13672 PP2C_2: Protein phosp 99.8 2E-20 4.3E-25 172.1 4.5 155 263-430 2-179 (212)
9 PF00481 PP2C: Protein phospha 99.8 1.3E-19 2.9E-24 173.0 6.7 159 265-431 5-214 (254)
10 smart00331 PP2C_SIG Sigma fact 99.6 1.8E-14 4E-19 130.8 14.5 137 271-430 14-161 (193)
11 KOG0698 Serine/threonine prote 99.6 1.9E-14 4.2E-19 144.5 15.6 157 265-431 46-256 (330)
12 KOG0697 Protein phosphatase 1B 99.4 4.5E-12 9.7E-17 125.5 13.7 126 250-382 15-165 (379)
13 TIGR02865 spore_II_E stage II 99.2 2.5E-10 5.5E-15 126.6 15.1 153 252-430 547-709 (764)
14 PF07228 SpoIIE: Stage II spor 99.1 1.3E-09 2.9E-14 98.4 11.6 123 284-430 5-136 (193)
15 KOG1323 Serine/threonine phosp 99.1 6.1E-10 1.3E-14 112.8 10.0 94 282-380 143-284 (493)
16 KOG0700 Protein phosphatase 2C 99.1 1.3E-09 2.7E-14 112.2 12.2 41 341-381 200-246 (390)
17 KOG0699 Serine/threonine prote 98.2 1.7E-06 3.8E-11 88.9 5.6 40 342-381 330-369 (542)
18 COG2208 RsbU Serine phosphatas 96.7 0.024 5.1E-07 57.9 12.5 138 273-430 161-308 (367)
19 KOG0618 Serine/threonine phosp 75.2 4.6 0.0001 47.1 5.4 73 355-431 630-728 (1081)
20 KOG0699 Serine/threonine prote 66.6 9.5 0.00021 40.6 5.1 37 257-296 22-63 (542)
21 PRK10693 response regulator of 47.8 2.2E+02 0.0048 28.4 11.0 99 273-374 149-259 (303)
22 PF07177 Neuralized: Neuralize 23.2 1.8E+02 0.0038 23.4 4.7 59 131-192 9-68 (69)
No 1
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=308.67 Aligned_cols=238 Identities=39% Similarity=0.572 Sum_probs=182.5
Q ss_pred Eeeecccccccccccccccccccc--cccccccccCCCCCCCCCCCchhhhhcccCccccccccC-CCcceEEEeeeeec
Q 014059 188 YFICNFAKRWFNFFPQIDAGLRCF--HSLSPASFSAGTVPDVSFDSASREEQLGTSAASSEQKIS-AGKTLKLLSGACCL 264 (431)
Q Consensus 188 y~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~l~l~~gs~~l 264 (431)
|+.+.+...|..+....+.|+... |++.....++.+++-.+++.-.........++..-..+. .-..+....+.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~s~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~vt~~~~~~~~~~~ 81 (330)
T KOG1379|consen 2 YFMFRLLAIGMLLTKRAGQVLNRLVRHSSNVLRLSSQNAGFVSFSKYAKSTYGSDNSPGEAASLSSLVTSLCGFSKDFIR 81 (330)
T ss_pred cceehhHHHHHHHHHhhhhhHhhhhhccccchhhhccccCccccccccccccccCCCCcccccchhhhhhhccccccccC
Confidence 334444444444444444444433 334444455555555555543222222222222222111 11456667778888
Q ss_pred CCCCCCCCCCCccEEe-c--CCceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHhcccCC
Q 014059 265 PHPDKEETGGEDAHFI-S--DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSSTRAK 341 (431)
Q Consensus 265 Th~GkvR~~NEDA~~v-~--~~~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~~~~dp~~lL~~A~~~~~~~ 341 (431)
+|+-++-+.+|||||+ . ...+++||||||||+..|||+|.|+++||.+|.+.++.......+|..+|.+||.+.+..
T Consensus 82 ~~~~~~~~~GEDa~Fvss~~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~~ 161 (330)
T KOG1379|consen 82 PHPSKVGKGGEDAWFVSSNPHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKSQ 161 (330)
T ss_pred CccccCCCCCCcceeeccCcccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhhc
Confidence 9999999999999999 4 678999999999999999999999999999999888877666779999999999875544
Q ss_pred -----CCceEEEEEEe--CCceEEEEecCccEEEEECCeEEEeCccccccccChhhhhcCC------CCCCCCcccccce
Q 014059 342 -----GSSTACIIALT--DQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGS------NSDLPSSGQVGSF 408 (431)
Q Consensus 342 -----GGTTavva~L~--~~~l~vANVGDSR~YLlR~G~L~qlT~dQeh~fn~P~QLt~a~------ggd~p~~~dvd~~ 408 (431)
|+||+|++.++ +++||+||+|||++.++|+|++++.|++|+|+||+||||+..+ ..|.|..++. +
T Consensus 162 ~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~PyQLs~~p~~~~~~~~d~p~~ad~--~ 239 (330)
T KOG1379|consen 162 KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPYQLSSPPEGYSSYISDVPDSADV--T 239 (330)
T ss_pred CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCceeeccCCccccccccCCccccce--E
Confidence 99999999998 6789999999999999999999999999999999999998765 3688888888 9
Q ss_pred EEeeccCCCCcEEEEeCCCCCC
Q 014059 409 IFPCAHHFSQNLYIFLRVGLFA 430 (431)
Q Consensus 409 ~i~L~pG~~DDi~LLCSDGLtd 430 (431)
.++|++| |++||.||||||
T Consensus 240 ~~~v~~G---DvIilATDGlfD 258 (330)
T KOG1379|consen 240 SFDVQKG---DVIILATDGLFD 258 (330)
T ss_pred EEeccCC---CEEEEecccccc
Confidence 9999999 999999999998
No 2
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-29 Score=246.41 Aligned_cols=164 Identities=20% Similarity=0.211 Sum_probs=120.2
Q ss_pred EeeeeecCCCCCCCCCCCccEEe-cCC-----ceEEEeeCCCCCcccCCCHHHHHHHHHHHHH-HHHHcCCCCCCC--HH
Q 014059 258 LSGACCLPHPDKEETGGEDAHFI-SDK-----QAIGVADGVGGWANHGVNAGLYSRELMSNSV-AAIQEEPDGSID--PA 328 (431)
Q Consensus 258 ~~gs~~lTh~GkvR~~NEDA~~v-~~~-----~LfaVADGMGGhaaggVdAGe~As~La~~~~-~~i~~~~~~~~d--p~ 328 (431)
....++.||+|.+|..|||++++ ... .+|+||||||||+ +|++|+++++..+ +.+.+......+ ..
T Consensus 7 ~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~-----~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~ 81 (262)
T COG0631 7 SLKVAGLSDVGTVRKHNEDAFLIKPNENGNLLLLFAVADGMGGHA-----AGEVASKLAVEALARLFDETNFNSLNESLE 81 (262)
T ss_pred eeeeeeeccCCCccCCCCcceeeccccCCcceeEEEEEeCccchh-----HHHHHHHHHHHHHHHHHHhccccccchhHH
Confidence 34567889999999999999998 422 3999999999998 4777777766543 334432222222 23
Q ss_pred HHHHHHHh------------ccc-CCCCceEEEEEEeCCceEEEEecCccEEEEECCeEEEeCcccc-------------
Q 014059 329 RVLEKAHS------------STR-AKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQ------------- 382 (431)
Q Consensus 329 ~lL~~A~~------------~~~-~~GGTTavva~L~~~~l~vANVGDSR~YLlR~G~L~qlT~dQe------------- 382 (431)
++|.++.. +.. ..||||++++++.++++++|||||||+|++|+|++.|+|+||.
T Consensus 82 ~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~ 161 (262)
T COG0631 82 ELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITP 161 (262)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCH
Confidence 33333221 122 4569999999999999999999999999999999999999864
Q ss_pred -ccccChhh--hhcCCCCCCCCcccccceEEeeccCCCCcEEEEeCCCCCCC
Q 014059 383 -HDFNFTYQ--LEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV 431 (431)
Q Consensus 383 -h~fn~P~Q--Lt~a~ggd~p~~~dvd~~~i~L~pG~~DDi~LLCSDGLtdv 431 (431)
.+..+|.. ++++.|......+++ ...++.+| |.||||||||||+
T Consensus 162 ~~~~~~~~~~~ltralG~~~~~~p~~--~~~~~~~~---d~llL~SDGl~d~ 208 (262)
T COG0631 162 EEARSHPRRNALTRALGDFDLLEPDI--TELELEPG---DFLLLCSDGLWDV 208 (262)
T ss_pred HHHHhCccchhhhhhcCCCcccceeE--EEEEcCCC---CEEEEECCCCccC
Confidence 12234443 455554444466677 99999999 9999999999985
No 3
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.94 E-value=9.9e-27 Score=250.92 Aligned_cols=162 Identities=15% Similarity=0.162 Sum_probs=113.7
Q ss_pred eeeeecCCCCCCCCCCCccEEe-c--------------CCceEEEeeCCCCCcccCCCHHHHHHHHHHHHH-HHHHcCCC
Q 014059 259 SGACCLPHPDKEETGGEDAHFI-S--------------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSV-AAIQEEPD 322 (431)
Q Consensus 259 ~gs~~lTh~GkvR~~NEDA~~v-~--------------~~~LfaVADGMGGhaaggVdAGe~As~La~~~~-~~i~~~~~ 322 (431)
...++.||+|++|+.|||++.+ . +..+|+||||||||.+ |++|++++++.+ +.+.+...
T Consensus 375 l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~-----GevAS~lAv~~L~~~~~~~~~ 449 (645)
T PRK14559 375 LEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAA-----GEVASALAVETLQQYFQQHWQ 449 (645)
T ss_pred EEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchh-----HHHHHHHHHHHHHHHHHhhhc
Confidence 4567889999999999999876 3 1358999999999985 666776665433 23322111
Q ss_pred CCCCHHHHHHHHHh------------cc--c-CCCCceEEEEEEeCCceEEEEecCccEEEE-ECCeEEEeCccccc---
Q 014059 323 GSIDPARVLEKAHS------------ST--R-AKGSSTACIIALTDQGLRAINLGDSGFVVV-RDGCTVFRSPVQQH--- 383 (431)
Q Consensus 323 ~~~dp~~lL~~A~~------------~~--~-~~GGTTavva~L~~~~l~vANVGDSR~YLl-R~G~L~qlT~dQeh--- 383 (431)
......+.|++++. +. . ..||||++++++.++.++++||||||+|++ |+|++.|+|+||..
T Consensus 450 ~~~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~ 529 (645)
T PRK14559 450 DELPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQR 529 (645)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHH
Confidence 11222233333221 11 1 247999999999999999999999999999 57899999998741
Q ss_pred ----------cccChh--hhhcCCCCCCC--CcccccceEEeeccCCCCcEEEEeCCCCCC
Q 014059 384 ----------DFNFTY--QLEYGSNSDLP--SSGQVGSFIFPCAHHFSQNLYIFLRVGLFA 430 (431)
Q Consensus 384 ----------~fn~P~--QLt~a~ggd~p--~~~dvd~~~i~L~pG~~DDi~LLCSDGLtd 430 (431)
+..+|. .++++.|.... ..+++ ..+.+++| |+||||||||||
T Consensus 530 lv~~Gi~~~~a~~~p~~~~LTrALG~~~~~~l~Pdi--~~~~L~~g---D~lLLCSDGL~D 585 (645)
T PRK14559 530 EIQRGVEPQIAYARPDAYQLTQALGPRDNSAIQPDI--QFLEIEED---TLLLLCSDGLSD 585 (645)
T ss_pred HHHhCCCHHHHhcCcccceeeeccCCCCCCcccceE--EEEEcCCC---CEEEEECCCCCC
Confidence 222343 35666654322 34555 88999999 999999999997
No 4
>PLN03145 Protein phosphatase 2c; Provisional
Probab=99.93 E-value=3.8e-25 Score=225.11 Aligned_cols=161 Identities=17% Similarity=0.180 Sum_probs=111.0
Q ss_pred EeeeeecCCCCCCCCCCCccEEe-cC--------------CceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCC
Q 014059 258 LSGACCLPHPDKEETGGEDAHFI-SD--------------KQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPD 322 (431)
Q Consensus 258 ~~gs~~lTh~GkvR~~NEDA~~v-~~--------------~~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~ 322 (431)
+..+.+.||+|. |+.|||+|++ .. ..+|+||||||||. +|+||++.+..... +...
T Consensus 64 ~~~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~-----age~as~~l~~~i~---~~~~ 134 (365)
T PLN03145 64 VVRSGAWADIGS-RSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKH-----AADFACYHLPRFIV---EDED 134 (365)
T ss_pred ceEEEEEccccC-CCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHH-----HHHHHHHHHHHHHH---hhhc
Confidence 345678899996 9999999986 31 25899999999997 57888777664332 1111
Q ss_pred CCCCHHHHHHHHHhc------------ccCCCCceEEEEEEeCCceEEEEecCccEEEEECCeEEEeCcccccc------
Q 014059 323 GSIDPARVLEKAHSS------------TRAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHD------ 384 (431)
Q Consensus 323 ~~~dp~~lL~~A~~~------------~~~~GGTTavva~L~~~~l~vANVGDSR~YLlR~G~L~qlT~dQeh~------ 384 (431)
...+..++|.+++.. ....+|||++++++.++.++++||||||+|++|+|+++++|+||...
T Consensus 135 ~~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~ 214 (365)
T PLN03145 135 FPREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERK 214 (365)
T ss_pred cchhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHH
Confidence 111233444444321 12347999999999999999999999999999999999999986421
Q ss_pred ------------ccChh-hhhcCCCCCC-----------CCcccccceEEeeccCCCCcEEE-EeCCCCCCC
Q 014059 385 ------------FNFTY-QLEYGSNSDL-----------PSSGQVGSFIFPCAHHFSQNLYI-FLRVGLFAV 431 (431)
Q Consensus 385 ------------fn~P~-QLt~a~ggd~-----------p~~~dvd~~~i~L~pG~~DDi~L-LCSDGLtdv 431 (431)
..++. .++++.| |. +..++.|...+++.++ |.|| ||||||||+
T Consensus 215 RI~~~Gg~v~~g~v~g~l~vTRalG-D~~~k~~k~~~~~~vs~ePdv~~~~l~~~---D~fLILaSDGLwdv 282 (365)
T PLN03145 215 RIEASGGYVYDGYLNGQLNVARALG-DWHMEGMKGSDGGPLSAEPELMTTQLTEE---DEFLIIGCDGIWDV 282 (365)
T ss_pred HHHHcCCceecceECCccccccccc-cccccccccccCCCcceEEEEEEEECCCC---CEEEEEeCCccccC
Confidence 01111 1344443 21 2222333388999998 7765 899999996
No 5
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.91 E-value=9.5e-24 Score=195.46 Aligned_cols=160 Identities=23% Similarity=0.300 Sum_probs=109.7
Q ss_pred eecCCCCCCCCCCCccEEe-c-----CCceEEEeeCCCCCcccCCCHHHHHHHHHHHHH-HHHHcCCC-CCCCHHHHHHH
Q 014059 262 CCLPHPDKEETGGEDAHFI-S-----DKQAIGVADGVGGWANHGVNAGLYSRELMSNSV-AAIQEEPD-GSIDPARVLEK 333 (431)
Q Consensus 262 ~~lTh~GkvR~~NEDA~~v-~-----~~~LfaVADGMGGhaaggVdAGe~As~La~~~~-~~i~~~~~-~~~dp~~lL~~ 333 (431)
++.++.+.+|+.|||++++ . +..+++||||||||. .+++|++++.... +.+..... ...++...|+.
T Consensus 3 ~~~~~~~g~r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~-----~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 77 (254)
T cd00143 3 AGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHA-----AGEFASKLLVEELLEELEETLTLSEEDIEEALRK 77 (254)
T ss_pred eeeecCCCCCCCCcceEEEeccCCCCCcEEEEEEcCCChHH-----HHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Confidence 4556777779999999988 4 347999999999997 4666666665433 22222110 01112233333
Q ss_pred HHhc-------------ccCCCCceEEEEEEeCCceEEEEecCccEEEEECCeEEEeCcccccc----------------
Q 014059 334 AHSS-------------TRAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHD---------------- 384 (431)
Q Consensus 334 A~~~-------------~~~~GGTTavva~L~~~~l~vANVGDSR~YLlR~G~L~qlT~dQeh~---------------- 384 (431)
++.. ....+|||++++++.++.++++|+||||+|++|++++.++|++|...
T Consensus 78 ~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~ 157 (254)
T cd00143 78 AFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS 157 (254)
T ss_pred HHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE
Confidence 3221 11456999999999999999999999999999999999999986533
Q ss_pred -ccChhh--hhcCCCCC-----CCCcccccceEEee-ccCCCCcEEEEeCCCCCCC
Q 014059 385 -FNFTYQ--LEYGSNSD-----LPSSGQVGSFIFPC-AHHFSQNLYIFLRVGLFAV 431 (431)
Q Consensus 385 -fn~P~Q--Lt~a~ggd-----~p~~~dvd~~~i~L-~pG~~DDi~LLCSDGLtdv 431 (431)
...|.+ +++..|.. ....+++ ...++ ++| |+|||||||||+.
T Consensus 158 ~~~~~~~~~~t~~lG~~~~~~~~~~~~~~--~~~~l~~~~---d~ill~SDG~~~~ 208 (254)
T cd00143 158 NGRVPGVLAVTRALGDFDLKPGVSAEPDV--TVVKLTEDD---DFLILASDGLWDV 208 (254)
T ss_pred eCEEcCceeeccccCCccccCCEEcCCeE--EEEEeCCCC---cEEEEECCCCeec
Confidence 123333 33433333 1333555 88888 999 9999999999974
No 6
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.89 E-value=1.1e-22 Score=189.82 Aligned_cols=157 Identities=25% Similarity=0.264 Sum_probs=108.5
Q ss_pred CCCCCCCCCCCccEEe-cC----CceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCCC-CCCHHHHHHHHHhcc
Q 014059 265 PHPDKEETGGEDAHFI-SD----KQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDG-SIDPARVLEKAHSST 338 (431)
Q Consensus 265 Th~GkvR~~NEDA~~v-~~----~~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~~-~~dp~~lL~~A~~~~ 338 (431)
++.+..|..|||++++ .. ..+|+|||||||+. ++.++.+.+.+........... ..++.++|++++...
T Consensus 11 ~~~~~~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (255)
T smart00332 11 SSMQGVRKPMEDAHVITPDLSDSGAFFGVFDGHGGSE-----AAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKT 85 (255)
T ss_pred ecCCCCCCCCcceEEEeccCCCCeEEEEEEeCCCcHH-----HHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHH
Confidence 6778889999999988 42 34899999999876 5677777666443322111110 122444555443211
Q ss_pred -------------cCCCCceEEEEEEeCCceEEEEecCccEEEEECCeEEEeCccccc-------------------ccc
Q 014059 339 -------------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQH-------------------DFN 386 (431)
Q Consensus 339 -------------~~~GGTTavva~L~~~~l~vANVGDSR~YLlR~G~L~qlT~dQeh-------------------~fn 386 (431)
...+|||++++++.++.++++|+||||+|++|++++.++|++|.. ..+
T Consensus 86 ~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~~~~ 165 (255)
T smart00332 86 DEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVINGRVN 165 (255)
T ss_pred HHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEECCeEC
Confidence 134699999999999999999999999999999999999998654 222
Q ss_pred ChhhhhcCCCCCC-----CCcccccceEEee-ccCCCCcEEEEeCCCCCCC
Q 014059 387 FTYQLEYGSNSDL-----PSSGQVGSFIFPC-AHHFSQNLYIFLRVGLFAV 431 (431)
Q Consensus 387 ~P~QLt~a~ggd~-----p~~~dvd~~~i~L-~pG~~DDi~LLCSDGLtdv 431 (431)
.+.++++..|... ...+++ ...++ ++| |.|||||||||+.
T Consensus 166 ~~~~lt~~~g~~~~~~~i~~~p~~--~~~~~~~~~---d~ill~SDGv~~~ 211 (255)
T smart00332 166 GVLALSRAIGDFFLKPYVSAEPDV--TVVELTEKD---DFLILASDGLWDV 211 (255)
T ss_pred CeEecccccCCHhhcCCeEeeeEE--EEEEecCCC---cEEEEECCccccC
Confidence 2234555554332 122445 67775 899 9999999999973
No 7
>PTZ00224 protein phosphatase 2C; Provisional
Probab=99.88 E-value=1e-21 Score=201.21 Aligned_cols=153 Identities=23% Similarity=0.299 Sum_probs=100.3
Q ss_pred eeecCCCCCCCCCCCccEEe---cCCceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHH--
Q 014059 261 ACCLPHPDKEETGGEDAHFI---SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAH-- 335 (431)
Q Consensus 261 s~~lTh~GkvR~~NEDA~~v---~~~~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~~~~dp~~lL~~A~-- 335 (431)
+.+.+++|+ |+.|||++++ .+..+|+||||+||.. ++.++.+.+. +.+..... .... +.|+.++
T Consensus 24 ~g~~s~~G~-R~~nED~~~v~~~~~~~lfgVfDGHgG~~-----~S~~~~~~l~---~~l~~~~~-~~~~-~~l~~a~~~ 92 (381)
T PTZ00224 24 CASACVNGY-RESMEDAHLLYLTDDWGFFGVFDGHVNDE-----CSQYLARAWP---QALEKEPE-PMTD-ERMEELCLE 92 (381)
T ss_pred EEEEeCCCC-CCCCCCeeEeccCCCceEEEEEeCCCcHH-----HHHHHHHHHH---HHHHhccc-cccH-HHHHHHHHH
Confidence 556799998 9999999876 3446999999988753 2333333332 23322211 1111 1222222
Q ss_pred -----hcccCCCCceEEEEEEe-CCceEEEEecCccEEEEECCeEEEeCccccc-------------cccChhh------
Q 014059 336 -----SSTRAKGSSTACIIALT-DQGLRAINLGDSGFVVVRDGCTVFRSPVQQH-------------DFNFTYQ------ 390 (431)
Q Consensus 336 -----~~~~~~GGTTavva~L~-~~~l~vANVGDSR~YLlR~G~L~qlT~dQeh-------------~fn~P~Q------ 390 (431)
.+....+|||++++++. ++.++++||||||+|++|+|+++++|+||.. +..++.+
T Consensus 93 ~d~~i~~~~~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~Rv~G~l~ 172 (381)
T PTZ00224 93 IDEEWMDSGREGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVVSNRVDGDLA 172 (381)
T ss_pred HHHHHHhcccCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEeccccccCcee
Confidence 12223468999988776 5689999999999999999999999998641 1122221
Q ss_pred hhcCCCCCC---------C------CcccccceEEeeccCCCCcEEEEeCCCCCC
Q 014059 391 LEYGSNSDL---------P------SSGQVGSFIFPCAHHFSQNLYIFLRVGLFA 430 (431)
Q Consensus 391 Lt~a~ggd~---------p------~~~dvd~~~i~L~pG~~DDi~LLCSDGLtd 430 (431)
++++. |+. + ..+++ ..+++.+| |+||||||||||
T Consensus 173 vTRal-Gd~~~K~~~~~~~~~~~v~~~Pdi--~~~~l~~~---D~llLaSDGL~d 221 (381)
T PTZ00224 173 VSRAF-GDRSFKVKGTGDYLEQKVIAVPDV--THLTCQSN---DFIILACDGVFE 221 (381)
T ss_pred eeccc-CCcccccccccccccCcceeeeEE--EEEECCCC---CEEEEECCCcCc
Confidence 33333 221 1 23455 88999999 999999999997
No 8
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.80 E-value=2e-20 Score=172.10 Aligned_cols=155 Identities=17% Similarity=0.196 Sum_probs=85.5
Q ss_pred ecCCCCCCCCCCCccEEe---cCCceEEEeeCCCCCcccCCCHHHHHHHHHHHH-HHHHHcCCCCCC-C-HH----HHHH
Q 014059 263 CLPHPDKEETGGEDAHFI---SDKQAIGVADGVGGWANHGVNAGLYSRELMSNS-VAAIQEEPDGSI-D-PA----RVLE 332 (431)
Q Consensus 263 ~lTh~GkvR~~NEDA~~v---~~~~LfaVADGMGGhaaggVdAGe~As~La~~~-~~~i~~~~~~~~-d-p~----~lL~ 332 (431)
+.+|+++ ++.|||++.+ .+..+++|||||||+.. |+.++++++.. ...+........ + .. .+.+
T Consensus 2 G~sh~~~-~~~nqD~~~~~~~~~~~~~aVaDG~g~~~~-----~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 75 (212)
T PF13672_consen 2 GRSHRGR-GAPNQDAFGIRTDDDGNLAAVADGVGGSPY-----GEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKK 75 (212)
T ss_dssp -----TT-SSS--EEEEEE-TCCTCEEEEEEEESTTTH-----HHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred CccccCC-CCCCCCCEEeeeCCCCEEEEEEECCCCCch-----hHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHH
Confidence 5678886 7999999986 35568899999999875 44445554432 334443221111 1 11 1111
Q ss_pred HHH-----------hc-ccCCCCceEEEEEEeCCceEEEEecCccEE-EEECCeEEEeCccccccccChhhhhcCCCCCC
Q 014059 333 KAH-----------SS-TRAKGSSTACIIALTDQGLRAINLGDSGFV-VVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDL 399 (431)
Q Consensus 333 ~A~-----------~~-~~~~GGTTavva~L~~~~l~vANVGDSR~Y-LlR~G~L~qlT~dQeh~fn~P~QLt~a~ggd~ 399 (431)
+.. .. ....++||++++++.++.++++||||||+| +.++|++..+|+++...+ +.+...-...+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~~--~~~~~~~~~~~~ 153 (212)
T PF13672_consen 76 EILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGEY--PNQTRSLTGDDP 153 (212)
T ss_dssp HHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHHH--HHCTTSCCHHCC
T ss_pred HHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccchh--hhhhhccCcccc
Confidence 111 11 123459999999999999999999999996 468999999998765322 233221111123
Q ss_pred CCcccccceEEeeccCCCCcEEEEeCCCCCC
Q 014059 400 PSSGQVGSFIFPCAHHFSQNLYIFLRVGLFA 430 (431)
Q Consensus 400 p~~~dvd~~~i~L~pG~~DDi~LLCSDGLtd 430 (431)
....++ ..+++++| |.|||||||+++
T Consensus 154 ~~~~~~--~~~~~~~~---d~ilL~SDG~~~ 179 (212)
T PF13672_consen 154 EPDVQY--GSIPLEEG---DVILLCSDGVWD 179 (212)
T ss_dssp CTETEE--EEEE--TT----EEEEE-HHHHT
T ss_pred ccCCeE--EEEEcCCC---CEEEEECcCccc
Confidence 333345 77889999 999999999985
No 9
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=99.78 E-value=1.3e-19 Score=172.98 Aligned_cols=159 Identities=19% Similarity=0.203 Sum_probs=97.9
Q ss_pred CCCCCCCCCCCccEEe-c---------CCceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHH
Q 014059 265 PHPDKEETGGEDAHFI-S---------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKA 334 (431)
Q Consensus 265 Th~GkvR~~NEDA~~v-~---------~~~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~~~~dp~~lL~~A 334 (431)
+....+|+.|||++++ . ...+|+|+||+||+. ++++++..+............ ..+..+.|..+
T Consensus 5 ~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~-----~a~~~~~~l~~~l~~~~~~~~-~~~~~~al~~a 78 (254)
T PF00481_consen 5 SSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSE-----AAEYASQNLPEFLKENLSFND-GNDIEEALRQA 78 (254)
T ss_dssp EEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSH-----HHHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHH
T ss_pred ecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChh-----hHHHHHHHHHHHHHhhccccc-ccchhhcccce
Confidence 3445579999999987 4 235899999999987 577777776643322111000 00233333333
Q ss_pred Hhc-------------ccCCCCceEEEEEEeCCceEEEEecCccEEEEECCeEE-EeCcccc-------------ccccC
Q 014059 335 HSS-------------TRAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTV-FRSPVQQ-------------HDFNF 387 (431)
Q Consensus 335 ~~~-------------~~~~GGTTavva~L~~~~l~vANVGDSR~YLlR~G~L~-qlT~dQe-------------h~fn~ 387 (431)
+.. ....+|||++++++.++++++|||||||+|++|++... ++|+||. .+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~ 158 (254)
T PF00481_consen 79 FLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVS 158 (254)
T ss_dssp HHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEE
T ss_pred eeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeeccccccc
Confidence 222 23456999999999999999999999999999999998 9999853 11111
Q ss_pred -------hhhhhcCCCC---CC----CCcccccceEEeeccCCCCcEEEEeCCCCCCC
Q 014059 388 -------TYQLEYGSNS---DL----PSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV 431 (431)
Q Consensus 388 -------P~QLt~a~gg---d~----p~~~dvd~~~i~L~pG~~DDi~LLCSDGLtdv 431 (431)
..+++++.|- .. .+.++.+...+++.++ |..++||||||||+
T Consensus 159 ~~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~--d~flvlaSDGlwd~ 214 (254)
T PF00481_consen 159 ENGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPD--DEFLVLASDGLWDV 214 (254)
T ss_dssp ETEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTT--EEEEEEE-HHHHTT
T ss_pred cchhhhhccccccccccccccccccceeeeeccccccccccc--ceEEEEEccccccc
Confidence 0112333321 11 2222333399999998 34778999999986
No 10
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.60 E-value=1.8e-14 Score=130.75 Aligned_cols=137 Identities=20% Similarity=0.133 Sum_probs=89.9
Q ss_pred CCCCCccEEe---cC-CceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHh---cc-cCCC
Q 014059 271 ETGGEDAHFI---SD-KQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHS---ST-RAKG 342 (431)
Q Consensus 271 R~~NEDA~~v---~~-~~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~~~~dp~~lL~~A~~---~~-~~~G 342 (431)
...+.|.|.+ ++ ..+++||||||+.. .|+.++..++..+...+.. ..++.++++...+ .. ...+
T Consensus 14 ~~~~GD~~~~~~~~~~~~~~~v~Dg~G~G~----~aa~~s~~~~~~~~~~~~~----~~~~~~~l~~~n~~l~~~~~~~~ 85 (193)
T smart00331 14 TQVGGDFYDVVKLPEGRLLIAIADVMGKGL----AAALAMSMARSALRTLLSE----GISLSQILERLNRAIYENGEDGM 85 (193)
T ss_pred HhcCccEEEEEEeCCCeEEEEEEecCCCCh----HHHHHHHHHHHHHHHHhhc----CCCHHHHHHHHHHHHHhcCCCCc
Confidence 4578899865 23 46889999999743 3455554444433322222 2345555554433 22 2335
Q ss_pred CceEEEEEE--eCCceEEEEecCccEEEEE-CCeEEEeCccccccccChhhhhcCCCCCCCCcccccceEEeeccCCCCc
Q 014059 343 SSTACIIAL--TDQGLRAINLGDSGFVVVR-DGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIFPCAHHFSQN 419 (431)
Q Consensus 343 GTTavva~L--~~~~l~vANVGDSR~YLlR-~G~L~qlT~dQeh~fn~P~QLt~a~ggd~p~~~dvd~~~i~L~pG~~DD 419 (431)
++|++++.+ .+++++++|+||+|+|++| ++..++.+++.. ..+ |.......+. .++++++| |
T Consensus 86 ~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~------~~l----G~~~~~~~~~--~~~~l~~g---d 150 (193)
T smart00331 86 FATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLG------APL----GLEPDVEVDV--RELTLEPG---D 150 (193)
T ss_pred EEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCC------cee----eeCCCCccee--EEEeeCCC---C
Confidence 999999998 4668999999999999999 677777776421 112 1122222344 78999999 9
Q ss_pred EEEEeCCCCCC
Q 014059 420 LYIFLRVGLFA 430 (431)
Q Consensus 420 i~LLCSDGLtd 430 (431)
+++||||||++
T Consensus 151 ~l~l~TDGl~e 161 (193)
T smart00331 151 LLLLYTDGLTE 161 (193)
T ss_pred EEEEECCCccc
Confidence 99999999987
No 11
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.59 E-value=1.9e-14 Score=144.51 Aligned_cols=157 Identities=23% Similarity=0.286 Sum_probs=98.1
Q ss_pred CCCCCCCCCCCccEEe-c-----------CCceEEEeeCCCCCcccCCCHHHHHHHHHHHH-HHHHHcCCCCCCCHHHHH
Q 014059 265 PHPDKEETGGEDAHFI-S-----------DKQAIGVADGVGGWANHGVNAGLYSRELMSNS-VAAIQEEPDGSIDPARVL 331 (431)
Q Consensus 265 Th~GkvR~~NEDA~~v-~-----------~~~LfaVADGMGGhaaggVdAGe~As~La~~~-~~~i~~~~~~~~dp~~lL 331 (431)
+..| .|..+||++.. + ...+|+|+|||||+. +++|+.+.+... .+.... .....+..+.+
T Consensus 46 ~~~~-~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~-----~A~~~~~~L~~~l~~~~~~-~~~~~~~~~a~ 118 (330)
T KOG0698|consen 46 SIRG-RRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDL-----AAKFAAKHLHKNLLEQLAF-PKDRQDVKDAL 118 (330)
T ss_pred ecCC-CCCccCcceeecccccccccCCCCceEEEEEEeCCCCHH-----HHHHHHHHHHHHHHhhhhc-ccchHHHHHHH
Confidence 4444 47789998865 2 246999999999986 677777554432 222211 11111234555
Q ss_pred HHHHh-cc----------cCCCCceEEEEEEeCC-ceEEEEecCccEEEEECC-eEEEeCccccccc-------------
Q 014059 332 EKAHS-ST----------RAKGSSTACIIALTDQ-GLRAINLGDSGFVVVRDG-CTVFRSPVQQHDF------------- 385 (431)
Q Consensus 332 ~~A~~-~~----------~~~GGTTavva~L~~~-~l~vANVGDSR~YLlR~G-~L~qlT~dQeh~f------------- 385 (431)
++++. ++ ...+|||++++++.++ .+++||+||||+++.+.| ..+++|.||....
T Consensus 119 ~~~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~ 198 (330)
T KOG0698|consen 119 RRAFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGR 198 (330)
T ss_pred HHHHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCE
Confidence 55554 21 2456888888888755 999999999999999866 7999999864211
Q ss_pred --cC--hhh------hhcCCCCC-----CCCcccccceEEeeccCCCCcEEEEeCCCCCCC
Q 014059 386 --NF--TYQ------LEYGSNSD-----LPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFAV 431 (431)
Q Consensus 386 --n~--P~Q------Lt~a~ggd-----~p~~~dvd~~~i~L~pG~~DDi~LLCSDGLtdv 431 (431)
.. +.+ ++++. || ..+.++.+....++.+. |+.|+|.|||||||
T Consensus 199 v~~~~~~~Rv~G~LavsRa~-GD~~~k~~~v~a~Pei~~~~~~~~--deFLiLasDGiwDv 256 (330)
T KOG0698|consen 199 VSNWGGVWRVNGVLAVSRAF-GDVELKSQGVIAEPEIQQVKINSD--DEFLILASDGIWDV 256 (330)
T ss_pred EEEcCCcceEeceEEEeeec-CCHHhcCCcEecCCceEEEEcCCC--CcEEEEeCCchhcc
Confidence 01 001 11222 22 12222232266777764 68999999999996
No 12
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=99.39 E-value=4.5e-12 Score=125.53 Aligned_cols=126 Identities=23% Similarity=0.303 Sum_probs=82.8
Q ss_pred CCCcceEEEeeeeecCCCCCCCCCCCccEEe-c-------CCceEEEeeCCCCCcccCCCHHHHHHHHHHHHH--HHHHc
Q 014059 250 SAGKTLKLLSGACCLPHPDKEETGGEDAHFI-S-------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSV--AAIQE 319 (431)
Q Consensus 250 ~~~~~l~l~~gs~~lTh~GkvR~~NEDA~~v-~-------~~~LfaVADGMGGhaaggVdAGe~As~La~~~~--~~i~~ 319 (431)
....--.|.+|...+. | .|-..|||+.. . +..+|+|.||+.|+.- |-..|..|+.++. +.+..
T Consensus 15 ~~G~GNglryg~SSMQ--G-WR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~v----a~~c~~hLlehi~sse~F~~ 87 (379)
T KOG0697|consen 15 AEGEGNGLRYGVSSMQ--G-WRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQV----ANHCAEHLLEHIISSEEFRG 87 (379)
T ss_pred ccCcCCceeeeecccc--c-hhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHH----HHHHHHHHHHHhhhhHHHhh
Confidence 3334455666665444 4 68999999965 1 5679999999999863 4444555555432 12221
Q ss_pred CCC-CC------------CCHHHHHHHHHhcc--cCCCCceEEEEEEeCCceEEEEecCccEEEEECCeEEEeCcccc
Q 014059 320 EPD-GS------------IDPARVLEKAHSST--RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQ 382 (431)
Q Consensus 320 ~~~-~~------------~dp~~lL~~A~~~~--~~~GGTTavva~L~~~~l~vANVGDSR~YLlR~G~L~qlT~dQe 382 (431)
..+ +. +...+.++...+.. .-.+|||+|.+++....+|++|+||||+.+.|+|+.++-|.||.
T Consensus 88 ~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHK 165 (379)
T KOG0697|consen 88 MTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHK 165 (379)
T ss_pred hccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCC
Confidence 100 11 11113333322211 12479999999999999999999999999999999999999854
No 13
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.19 E-value=2.5e-10 Score=126.56 Aligned_cols=153 Identities=13% Similarity=0.128 Sum_probs=101.0
Q ss_pred CcceEEEeeeeecCCCCCCCCCCCccEEe---cC-CceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCCCCCCH
Q 014059 252 GKTLKLLSGACCLPHPDKEETGGEDAHFI---SD-KQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDP 327 (431)
Q Consensus 252 ~~~l~l~~gs~~lTh~GkvR~~NEDA~~v---~~-~~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~~~~dp 327 (431)
.+++++..|.+..+.+| +..|.|.|.+ ++ ..+++||||||... .|+. ++.++.+..+.+.+. ..++
T Consensus 547 ~~~~~~~~g~a~~~k~g--~~vsGD~y~~~~l~~g~~~~~laDGmGhG~----~Aa~-~S~~~~~ll~~~~~~---g~~~ 616 (764)
T TIGR02865 547 TPKYHVSTGVARAAKDG--ELVSGDSYSFGKLSAGKYAVAISDGMGSGP----EAAQ-ESSACVRLLEKFLES---GFDR 616 (764)
T ss_pred CCceeehhhHHHhcCCC--CcccCceEEEEEECCCEEEEEEEcccCCCH----HHHH-HHHHHHHHHHHHHHc---CCCH
Confidence 35677777777777666 5689999865 23 34689999999644 3444 344444443333221 2445
Q ss_pred HHHHHHHHh---c-ccCCCCceEEEEEEe--CCceEEEEecCccEEEEECCeEEEeCccccccccChhhhhcCCCCCCCC
Q 014059 328 ARVLEKAHS---S-TRAKGSSTACIIALT--DQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPS 401 (431)
Q Consensus 328 ~~lL~~A~~---~-~~~~GGTTavva~L~--~~~l~vANVGDSR~YLlR~G~L~qlT~dQeh~fn~P~QLt~a~ggd~p~ 401 (431)
.++++.... . ....+.+|+.++.++ .+.+.++|+|+++.|+.|++++.+++.. +.| + |.....
T Consensus 617 ~~ai~~lN~~L~~~~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~-----~lP--l----Gil~~~ 685 (764)
T TIGR02865 617 EVAIKTVNSILSLRSTDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSS-----NLP--I----GILDEV 685 (764)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCC-----Cce--e----EeccCC
Confidence 555544332 1 112247999999886 4679999999999999999988877642 223 1 111222
Q ss_pred cccccceEEeeccCCCCcEEEEeCCCCCC
Q 014059 402 SGQVGSFIFPCAHHFSQNLYIFLRVGLFA 430 (431)
Q Consensus 402 ~~dvd~~~i~L~pG~~DDi~LLCSDGLtd 430 (431)
+.+. .+.+++|| |+++|||||++|
T Consensus 686 ~~~~--~~~~L~~G---D~Lll~SDGv~E 709 (764)
T TIGR02865 686 DVEL--VRKKLKNG---DLIVMVSDGVLE 709 (764)
T ss_pred ccce--EEEEeCCC---CEEEEECCCCCc
Confidence 3444 88999999 999999999986
No 14
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.07 E-value=1.3e-09 Score=98.39 Aligned_cols=123 Identities=24% Similarity=0.209 Sum_probs=79.1
Q ss_pred ceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHhc----ccCC-CCceEEEEEEeC--Cce
Q 014059 284 QAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSS----TRAK-GSSTACIIALTD--QGL 356 (431)
Q Consensus 284 ~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~~~~dp~~lL~~A~~~----~~~~-GGTTavva~L~~--~~l 356 (431)
-+++|+|+||- |+.|+.++..+...+...+.. ..+|.++++..++. .... ...|++++.++. +.+
T Consensus 5 ~~~~v~D~~Gh----G~~aa~~~~~~~~~~~~~~~~----~~~p~~~l~~ln~~l~~~~~~~~~~~t~~~~~~d~~~~~l 76 (193)
T PF07228_consen 5 YFIIVGDVSGH----GVSAALLSAALASAIRELLDE----GLDPEELLEALNRRLYRDLKGDNRYATACYAIIDPETGTL 76 (193)
T ss_dssp EEEEEEEESSS----SHHHHHHHHHHHHHHHHHHHT----TTSHHHHHHHHHHHHHHHTTTTSTTEEEEEEEEETTTTEE
T ss_pred EEEEEEEecCC----CHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhhhccccceEEEEEecccceEE
Confidence 35799999993 566777666665444333332 34477666665443 2333 578999888764 469
Q ss_pred EEEEecCccEEEEECCe--EEEeCccccccccChhhhhcCCCCCCCCcccccceEEeeccCCCCcEEEEeCCCCCC
Q 014059 357 RAINLGDSGFVVVRDGC--TVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYIFLRVGLFA 430 (431)
Q Consensus 357 ~vANVGDSR~YLlR~G~--L~qlT~dQeh~fn~P~QLt~a~ggd~p~~~dvd~~~i~L~pG~~DDi~LLCSDGLtd 430 (431)
.++|+|+++++++|+++ ...+.. .+.| ++ ......... .++++++| |+++||||||+|
T Consensus 77 ~~~~aG~~~~l~~~~~~~~~~~~~~-----~~~~--lG----~~~~~~~~~--~~~~l~~g---d~l~l~TDGl~e 136 (193)
T PF07228_consen 77 TYANAGHPPPLLLRPGGREIEQLES-----EGPP--LG----IFEDIDYQE--QEIQLEPG---DRLLLYTDGLFE 136 (193)
T ss_dssp EEEEESSSEEEEEETTCTEEEEETC-----SSBB--CS----SSCTTCEEE--EEEE--TT---EEEEEECHHHCT
T ss_pred EEeCCCCCCEEEEeccccceeeccc-----Cccc--ee----eeccccccc--eEEEeccc---cEEEEeCCChhh
Confidence 99999999999999943 333322 1222 22 112222344 88999999 999999999987
No 15
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.06 E-value=6.1e-10 Score=112.83 Aligned_cols=94 Identities=24% Similarity=0.242 Sum_probs=66.1
Q ss_pred CCceEEEeeCCCCCcccCCCHHHHHHHHHHHHHH--------HHHc-----------CCC---C-----------CCC--
Q 014059 282 DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVA--------AIQE-----------EPD---G-----------SID-- 326 (431)
Q Consensus 282 ~~~LfaVADGMGGhaaggVdAGe~As~La~~~~~--------~i~~-----------~~~---~-----------~~d-- 326 (431)
+..+|-++||+.|.+ ++.+|+++...++. .+.. +.. . .+.
T Consensus 143 ~~~~~slfdghags~-----~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E 217 (493)
T KOG1323|consen 143 DGALFSLFDGHAGSA-----VAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHE 217 (493)
T ss_pred cceeeeeecCCCcch-----HHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchH
Confidence 567999999999875 57888888764431 1110 000 0 000
Q ss_pred --HHHHHHHHHhc-----------ccCCCCceEEEEEEeCCceEEEEecCccEEEEECCeEEEeCcc
Q 014059 327 --PARVLEKAHSS-----------TRAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPV 380 (431)
Q Consensus 327 --p~~lL~~A~~~-----------~~~~GGTTavva~L~~~~l~vANVGDSR~YLlR~G~L~qlT~d 380 (431)
....|+.|+++ -...||||+.+++.--+++|++|.||||++++|+++++.++++
T Consensus 218 ~LViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~e 284 (493)
T KOG1323|consen 218 HLVIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKE 284 (493)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccc
Confidence 01355555543 1367899999998888999999999999999999999988774
No 16
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=99.05 E-value=1.3e-09 Score=112.23 Aligned_cols=41 Identities=24% Similarity=0.173 Sum_probs=34.5
Q ss_pred CCCceEEEEEEeCCceEEEEecCccEEEEE---CC---eEEEeCccc
Q 014059 341 KGSSTACIIALTDQGLRAINLGDSGFVVVR---DG---CTVFRSPVQ 381 (431)
Q Consensus 341 ~GGTTavva~L~~~~l~vANVGDSR~YLlR---~G---~L~qlT~dQ 381 (431)
.+|++++++++.+..+||||+||||++|=+ +| ..+|+|+||
T Consensus 200 ~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dH 246 (390)
T KOG0700|consen 200 LVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDH 246 (390)
T ss_pred hhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhh
Confidence 469999999999999999999999998743 34 468899875
No 17
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=98.20 E-value=1.7e-06 Score=88.93 Aligned_cols=40 Identities=30% Similarity=0.295 Sum_probs=37.7
Q ss_pred CCceEEEEEEeCCceEEEEecCccEEEEECCeEEEeCccc
Q 014059 342 GSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQ 381 (431)
Q Consensus 342 GGTTavva~L~~~~l~vANVGDSR~YLlR~G~L~qlT~dQ 381 (431)
.|||+|++++.++.++|||.|||||++-|+|+.+-++-||
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DH 369 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDH 369 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCceeecccCC
Confidence 3999999999999999999999999999999999998864
No 18
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=96.66 E-value=0.024 Score=57.85 Aligned_cols=138 Identities=18% Similarity=0.142 Sum_probs=83.9
Q ss_pred CCCccEEe---cC-CceEEEeeCCCCCcccCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHH---Hhccc-CCCCc
Q 014059 273 GGEDAHFI---SD-KQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKA---HSSTR-AKGSS 344 (431)
Q Consensus 273 ~NEDA~~v---~~-~~LfaVADGMGGhaaggVdAGe~As~La~~~~~~i~~~~~~~~dp~~lL~~A---~~~~~-~~GGT 344 (431)
.+-|.|-+ .+ .-.++|+|.+| .|+.|+.. ..+.....+.+... ...+|.++|+.. +.... ..+-+
T Consensus 161 vGGD~yd~~~~~~~~~~i~I~DvsG----~Gv~aal~-m~~~~~~~~~~~~~--~~~~p~~~l~~~n~~~~~~~~~~~f~ 233 (367)
T COG2208 161 VGGDYYDFIQLGEKRLRIGIGDVSG----KGVPAALL-MLMPKLALRLLLES--GPLDPADVLETLNRVLKQNLEEDMFV 233 (367)
T ss_pred cCCceEEEEEECCcEEEEEEEeccC----CCHHHHHH-HHHHHHHHHHhhhc--ccCCHHHHHHHHHHHHHhcccCCcEE
Confidence 67787743 32 44679999998 35656655 22222333344332 246777666654 33222 22578
Q ss_pred eEEEEEEeC--CceEEEEecCccEEEEECCeEEEeCccccccccChhhhhcCCCCCCCCcccccceEEeeccCCCCcEEE
Q 014059 345 TACIIALTD--QGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVGSFIFPCAHHFSQNLYI 422 (431)
Q Consensus 345 Tavva~L~~--~~l~vANVGDSR~YLlR~G~L~qlT~dQeh~fn~P~QLt~a~ggd~p~~~dvd~~~i~L~pG~~DDi~L 422 (431)
|++..+++- ..+..+|+|=--.++++.+.-....+-+.. +...|-.+.....+ ....++|| |.++
T Consensus 234 T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~~--------g~piG~~~~~~~~~--~~~~l~~g---d~lv 300 (367)
T COG2208 234 TLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTAL--------GLPIGLLPDYQYEV--ASLQLEPG---DLLV 300 (367)
T ss_pred EEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccCC--------CceeeecCCccchh--eeEEecCC---CEEE
Confidence 998888864 479999999999999987653211111001 11122222333444 88999999 9999
Q ss_pred EeCCCCCC
Q 014059 423 FLRVGLFA 430 (431)
Q Consensus 423 LCSDGLtd 430 (431)
|-|||+++
T Consensus 301 l~tDGv~E 308 (367)
T COG2208 301 LYTDGVTE 308 (367)
T ss_pred EEcCCeee
Confidence 99999987
No 19
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=75.15 E-value=4.6 Score=47.15 Aligned_cols=73 Identities=18% Similarity=0.127 Sum_probs=48.5
Q ss_pred ceEEEEecCccEEEEECCeEEEeCcccc--------------ccccChhh-h------hcCCCCC---CCC--cccccce
Q 014059 355 GLRAINLGDSGFVVVRDGCTVFRSPVQQ--------------HDFNFTYQ-L------EYGSNSD---LPS--SGQVGSF 408 (431)
Q Consensus 355 ~l~vANVGDSR~YLlR~G~L~qlT~dQe--------------h~fn~P~Q-L------t~a~ggd---~p~--~~dvd~~ 408 (431)
.+.+||+|+|.+.+.|+|+-.+.|+.+. ++|.+... + ++..|.. +.+ .+++ .
T Consensus 630 ~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~P~v~p~Phv--~ 707 (1081)
T KOG0618|consen 630 TLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLFPHVLPDPHV--S 707 (1081)
T ss_pred hhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeecCCCeeeceeeeeeecccccccccccCCCce--e
Confidence 6899999999999999999888888532 33333111 1 0112211 111 2445 7
Q ss_pred EEeeccCCCCcEEEEeCCCCCCC
Q 014059 409 IFPCAHHFSQNLYIFLRVGLFAV 431 (431)
Q Consensus 409 ~i~L~pG~~DDi~LLCSDGLtdv 431 (431)
.+.+.+- |..+++++-+||+|
T Consensus 708 ~~~Lt~q--dE~LIvgn~~lW~~ 728 (1081)
T KOG0618|consen 708 VVILTEQ--DEFLIVGNKQLWSV 728 (1081)
T ss_pred eEecccC--ceEEEEcchHHhhh
Confidence 7888876 78999999999986
No 20
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=66.60 E-value=9.5 Score=40.58 Aligned_cols=37 Identities=35% Similarity=0.470 Sum_probs=27.7
Q ss_pred EEeeeeecCCCCCCCCCCCccEEe-----cCCceEEEeeCCCCCc
Q 014059 257 LLSGACCLPHPDKEETGGEDAHFI-----SDKQAIGVADGVGGWA 296 (431)
Q Consensus 257 l~~gs~~lTh~GkvR~~NEDA~~v-----~~~~LfaVADGMGGha 296 (431)
|-+|+..+. | +|-..||||-. .+..+|+|-||+||-.
T Consensus 22 L~yg~s~MQ--G-WRvsqEDAHNci~~ld~~t~mF~VYDGHGG~E 63 (542)
T KOG0699|consen 22 LSYGCSTMQ--G-WRVSQEDAHNCIVDLDTDTHMFGVYDGHGGTE 63 (542)
T ss_pred chhchhhhh--c-cccchhhhhcccccccCcceEEEEecCCCcHH
Confidence 555665444 4 68899999954 2578999999999954
No 21
>PRK10693 response regulator of RpoS; Provisional
Probab=47.78 E-value=2.2e+02 Score=28.36 Aligned_cols=99 Identities=13% Similarity=0.062 Sum_probs=53.2
Q ss_pred CCCccEEe----cCCceEEEee--CCCCCcccCCCHHHHHHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHh---cccCCC
Q 014059 273 GGEDAHFI----SDKQAIGVAD--GVGGWANHGVNAGLYSRELMSNSVAAIQ-EEPDGSIDPARVLEKAHS---STRAKG 342 (431)
Q Consensus 273 ~NEDA~~v----~~~~LfaVAD--GMGGhaaggVdAGe~As~La~~~~~~i~-~~~~~~~dp~~lL~~A~~---~~~~~G 342 (431)
.+-|.+-+ ++.-.|.++| |+|||. +.++.....+.....+... .......+|.++|+.... .....+
T Consensus 149 ~~GD~~d~~~l~~~~~~~~~~DvsGhg~hg---~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~~~~ 225 (303)
T PRK10693 149 KPGLVLDIAALSDNDLAFYCLDVTRAGDNG---VLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPG 225 (303)
T ss_pred CCccEEeeeecCCCcEEEEEEecCCCCccc---HHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcCCCc
Confidence 45666643 2344667888 444663 3344444443332322211 111112356666665433 222223
Q ss_pred CceEEEEEEeCC--ceEEEEecCccEEEEECCeE
Q 014059 343 SSTACIIALTDQ--GLRAINLGDSGFVVVRDGCT 374 (431)
Q Consensus 343 GTTavva~L~~~--~l~vANVGDSR~YLlR~G~L 374 (431)
--|++.++++.. .+.++|.|-...++..++++
T Consensus 226 ~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 226 QFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred eeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 468888888654 69999999999885444444
No 22
>PF07177 Neuralized: Neuralized; InterPro: IPR006573 NEUZ is a domain of unknown function found in neuralized proteins, i.e. proteins involved in the specification of the neuroblast during cellular differentiation. ; PDB: 2YUE_A 2E63_A.
Probab=23.22 E-value=1.8e+02 Score=23.44 Aligned_cols=59 Identities=12% Similarity=0.110 Sum_probs=33.7
Q ss_pred cccceEEeccccccCCcccCCCCCceeeEeeecccccceeeeee-eccCCCCCcceeEEeeec
Q 014059 131 SASKAVSVDYLTSRSGQCSLSTNNAAVSYVIRSVEGCRRATMSL-KSSKQSNNHLFHGYFICN 192 (431)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l-~~~~~~~~~~~~gy~~~~ 192 (431)
+++++.+.++-....- ...-+-++.|.+|.++.--++.|.+ +....|.+.+-+|.-++|
T Consensus 9 ~G~nV~L~~~~~~A~R---~~sf~~giVFS~rPl~~~E~~~v~I~~~~~~wsG~L~~GvT~~~ 68 (69)
T PF07177_consen 9 HGKNVRLSNDGTVARR---VSSFNNGIVFSSRPLRIGEKFEVRIDEVEPSWSGSLRIGVTSCD 68 (69)
T ss_dssp E-TTEEE-SSS-EEEE---ST-SSS-EEEESS-B-TT-EEEEEEEEE-SSSSS--EEEEESS-
T ss_pred cCCCEEEcCCCeEEEe---cccCCceEEEecCCccCCCEEEEEEEecCCCceeEEEEeeEccC
Confidence 5666666554332221 3333557999999999999999999 666789999999976554
Done!