Query 014060
Match_columns 431
No_of_seqs 201 out of 781
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 04:46:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014060.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014060hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e6u_A LANC-like protein 1; al 100.0 3.2E-59 1.1E-63 469.5 36.8 337 76-431 68-411 (411)
2 2g0d_A Nisin biosynthesis prot 100.0 2.8E-41 9.7E-46 340.1 23.7 326 77-423 29-391 (409)
3 3e6u_A LANC-like protein 1; al 99.9 9.8E-24 3.3E-28 211.6 27.5 278 104-420 48-349 (411)
4 2g0d_A Nisin biosynthesis prot 99.9 6.8E-21 2.3E-25 191.3 18.6 271 124-421 29-340 (409)
5 2ahf_A Unsaturated glucuronyl 97.8 0.00044 1.5E-08 67.7 16.2 153 259-420 102-294 (377)
6 2zzr_A Unsaturated glucuronyl 97.8 0.00052 1.8E-08 67.5 15.9 156 260-420 129-319 (397)
7 2ahf_A Unsaturated glucuronyl 97.7 0.0019 6.5E-08 63.2 19.0 257 86-355 44-340 (377)
8 2gz6_A N-acetyl-D-glucosamine 97.7 0.0024 8.1E-08 62.7 19.7 249 78-386 49-340 (388)
9 3pmm_A Putative cytoplasmic pr 97.7 0.0052 1.8E-07 60.3 21.6 285 41-340 21-332 (382)
10 3pmm_A Putative cytoplasmic pr 97.7 0.0033 1.1E-07 61.7 20.1 233 134-386 71-333 (382)
11 2zzr_A Unsaturated glucuronyl 97.7 0.0079 2.7E-07 59.1 22.2 239 86-340 70-345 (397)
12 3k11_A Putative glycosyl hydro 97.4 0.12 4.1E-06 51.4 27.5 293 35-339 20-363 (445)
13 1nc5_A Hypothetical protein YT 97.3 0.00081 2.8E-08 65.9 10.2 209 191-419 47-291 (373)
14 1nc5_A Hypothetical protein YT 97.2 0.025 8.7E-07 55.1 19.2 241 86-340 43-314 (373)
15 3k7x_A LIN0763 protein; Q92DQ0 97.0 0.057 2E-06 52.1 19.3 234 134-385 50-301 (349)
16 3k7x_A LIN0763 protein; Q92DQ0 97.0 0.012 4E-07 57.0 14.3 175 187-386 48-249 (349)
17 3gt5_A N-acetylglucosamine 2-e 96.6 0.37 1.3E-05 47.3 22.1 78 306-386 246-346 (402)
18 3gt5_A N-acetylglucosamine 2-e 95.5 0.051 1.7E-06 53.5 9.9 123 262-386 69-209 (402)
19 2gz6_A N-acetyl-D-glucosamine 95.2 0.059 2E-06 52.5 9.2 125 261-386 70-208 (388)
20 3k11_A Putative glycosyl hydro 94.7 0.34 1.1E-05 48.2 13.0 222 188-420 85-341 (445)
21 1fp3_A N-acyl-D-glucosamine 2- 93.0 0.25 8.7E-06 48.3 8.4 74 312-386 255-350 (402)
22 2zbl_A Putative isomerase; N-a 91.5 1.6 5.5E-05 42.9 12.2 127 259-386 186-352 (421)
23 2zbl_A Putative isomerase; N-a 91.0 0.53 1.8E-05 46.4 8.1 121 262-385 67-207 (421)
24 3h7l_A Endoglucanase; dehydrog 82.6 7.7 0.00026 39.7 11.0 118 264-386 190-339 (586)
25 3e7j_A Heparinase II protein; 80.8 7.1 0.00024 41.4 10.3 212 138-372 87-312 (749)
26 1gxm_A Pectate lyase; mechanis 80.6 5.4 0.00019 37.6 8.3 131 249-384 75-248 (332)
27 1dl2_A Class I alpha-1,2-manno 79.1 11 0.00038 37.9 10.6 75 43-118 122-208 (511)
28 1fp3_A N-acyl-D-glucosamine 2- 78.8 11 0.00039 36.2 10.6 116 270-386 19-158 (402)
29 1r76_A Pectate lyase; A-helica 78.5 23 0.00077 34.4 12.1 133 249-385 150-326 (408)
30 1hcu_A Alpha-1,2-mannosidase; 75.3 9.8 0.00033 38.2 8.9 73 44-117 130-210 (503)
31 2ri9_A Mannosyl-oligosaccharid 74.5 14 0.00048 36.8 9.8 73 44-117 117-196 (475)
32 1x9d_A Endoplasmic reticulum m 74.5 11 0.00036 38.2 9.0 73 44-117 187-269 (538)
33 1nxc_A Mannosyl-oligosaccharid 73.2 13 0.00045 37.0 9.2 73 44-117 123-207 (478)
34 2v8i_A Pectate lyase; periplas 68.8 18 0.00063 35.5 8.7 74 309-385 378-461 (543)
35 1nxc_A Mannosyl-oligosaccharid 68.3 7.5 0.00026 38.8 6.2 73 311-384 112-207 (478)
36 1r76_A Pectate lyase; A-helica 65.2 83 0.0029 30.4 12.6 42 247-289 292-334 (408)
37 3a0o_A Oligo alginate lyase; a 59.5 1.8E+02 0.006 30.6 15.5 26 138-163 214-239 (776)
38 1v5d_A Chitosanase; chitosan d 58.7 63 0.0021 31.1 10.7 130 252-382 79-228 (386)
39 3gzk_A Cellulase; fold from GH 57.0 89 0.003 31.5 11.9 116 264-379 188-333 (537)
40 1ks8_A Endo-B-1,4-glucanase; c 56.4 70 0.0024 31.2 10.8 118 263-380 89-240 (433)
41 1wzz_A Probable endoglucanase; 53.2 23 0.0008 33.4 6.4 79 305-384 107-202 (334)
42 3h7l_A Endoglucanase; dehydrog 52.7 36 0.0012 34.7 8.1 69 42-119 271-339 (586)
43 1x9d_A Endoplasmic reticulum m 52.2 22 0.00075 35.9 6.3 73 312-385 177-270 (538)
44 1ut9_A Cellulose 1,4-beta-cell 43.8 82 0.0028 32.3 9.3 112 264-378 227-380 (609)
45 1clc_A Endoglucanase CELD; EC: 43.8 1.2E+02 0.004 31.4 10.4 116 264-379 232-377 (639)
46 1gxm_A Pectate lyase; mechanis 38.6 2.5E+02 0.0086 26.3 13.2 36 247-282 216-251 (332)
47 1hcu_A Alpha-1,2-mannosidase; 38.5 26 0.00089 35.1 4.4 61 324-384 131-210 (503)
48 2sqc_A Squalene-hopene cyclase 36.6 1.4E+02 0.0049 30.6 9.8 76 264-354 9-86 (631)
49 1ks8_A Endo-B-1,4-glucanase; c 34.4 3.3E+02 0.011 26.4 12.1 133 190-352 215-350 (433)
50 2ri9_A Mannosyl-oligosaccharid 34.3 62 0.0021 32.1 6.3 62 324-385 118-197 (475)
51 1dl2_A Class I alpha-1,2-manno 31.6 2.8E+02 0.0097 27.6 10.6 121 263-384 123-273 (511)
52 1syq_B Talin 1; cytoskeleton, 26.6 41 0.0014 18.0 1.9 19 406-424 7-25 (26)
53 1g87_A Endocellulase 9G; endog 26.3 1.1E+02 0.0039 31.3 6.8 70 309-378 156-237 (614)
54 1w6k_A Lanosterol synthase; cy 25.4 5.9E+02 0.02 26.5 15.7 44 245-289 584-630 (732)
55 2yik_A Endoglucanase; hydrolas 25.3 3.3E+02 0.011 27.8 10.1 70 309-378 222-305 (611)
56 1kwf_A Endoglucanase A; hydrol 23.5 1.6E+02 0.0054 28.0 6.9 79 305-384 121-214 (363)
57 1wzz_A Probable endoglucanase; 23.4 83 0.0028 29.6 4.8 42 78-119 101-142 (334)
58 1w6k_A Lanosterol synthase; cy 22.4 2.1E+02 0.0073 29.9 8.2 25 265-290 478-502 (732)
59 1ia6_A Cellulase CEL9M; cellul 21.0 5.7E+02 0.02 24.7 17.0 138 190-352 213-354 (441)
60 3qxf_A Endoglucanase; cellulas 20.9 1E+02 0.0035 29.3 4.8 41 78-118 90-130 (355)
No 1
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=100.00 E-value=3.2e-59 Score=469.50 Aligned_cols=337 Identities=37% Similarity=0.658 Sum_probs=289.1
Q ss_pred CCCCccccccHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhhccCCcccccccchHHHHHHHHHHHHcCCcchHHHH
Q 014060 76 GMDPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTCASVVRDSTRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFF 155 (431)
Q Consensus 76 ~~~~~LY~G~~Gial~l~~L~~~t~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~G~~Gi~~l~~~~~~~~~d~~~~~~~ 155 (431)
+++.++|+|.+||+|||++++++|++++|++.+.++++.+.+.+. ...+++++|.+|+++++..+++.+++++..+.+
T Consensus 68 ~~~~~lY~G~~Gia~~l~~l~~~t~d~~yl~~a~~~l~~~~~~l~--~~~~~~~~G~aG~l~~l~~ly~~~g~~~~a~~~ 145 (411)
T 3e6u_A 68 PRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLT--KRSITFLCGDAGPLAVAAVLYHKMNNEKQAEDC 145 (411)
T ss_dssp TTCCCSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCC--SCCCCTTTSTHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCCCeeeChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc--ccCCccccCcHHHHHHHHHHHHHhCCHHHHHHH
Confidence 378999999999999999999999999999999999999887664 346899999999988888899999987766555
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccC---CCC
Q 014060 156 LNLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATAN---TAC 232 (431)
Q Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~---~~~ 232 (431)
++.+.+.. ..+ .+.++|+++|.||++++|+.+++.++++.+++..+.++++.+++.++...+.. ..+
T Consensus 146 ~~~l~~~~---~~~-------~~~~~dll~G~AG~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~ 215 (411)
T 3e6u_A 146 ITRLIHLN---KID-------PHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTAKS 215 (411)
T ss_dssp HHHHHGGG---GGC-------TTCCSSTTTSHHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTTTC
T ss_pred HHHHHHHh---ccc-------ccCChhhhcCcHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 55554432 122 23468999999999999999999999988877778889999988776543221 246
Q ss_pred CCcceeeccccCCCCcchHHHHHHHhcCC---CChHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccccCchHH
Q 014060 233 PLMYRWHGTRYWGAANGLAGILQVLLHFP---LSEEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPRDKLVQWSHGATGV 309 (431)
Q Consensus 233 ~~~~~w~~~~~~G~aHG~aGI~~~L~~~~---~~~~~~~~i~~~l~~~~~~~~~~~gnw~~~~~~~~~~~~~WChG~~Gi 309 (431)
|.+|.|+++.++|||||++||+++|+++. .++++.+.++++++|+++.+.+ +||||+.+++..+.+++||||+|||
T Consensus 216 pl~~~w~~~~~~G~aHG~aGI~~~Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~~-~g~wp~~~~~~~~~~~~wChG~~Gi 294 (411)
T 3e6u_A 216 PLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKFP-SGNYPPCIGDNRDLLVHWCHGAPGV 294 (411)
T ss_dssp SCCCCBTTBCBCSTTTSHHHHHHHHTCGGGCCCHHHHHHTHHHHHHHHHHTCCT-TSCCCSBTTCCCCCCCSSSSSHHHH
T ss_pred CcceeecCccCCcccccHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHhhcc-CCCCCCCCCcccCccccccCCcHHH
Confidence 78899999999999999999999999865 3567889999999999998876 6899998765555678999999999
Q ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHHHHHcCCC-CCCccccchhhHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhhhh
Q 014060 310 AITLCKASQVFPSDREFRDAAIEAGEVLWKNGLV-KKVGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQN 388 (431)
Q Consensus 310 ~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~-~~~~LCHG~aG~~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~~~~ 388 (431)
+++++.++++++ ++++.+.+.++++.+|+.|+. +++|||||.+|++++|+++|+.|++++|+++|.+++++++++..
T Consensus 295 ~~~l~~~~~~~~-~~~~~~~a~~~~~~~~~~g~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~~~~~~~~- 372 (411)
T 3e6u_A 295 IYMLIQAYKVFR-EEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGE- 372 (411)
T ss_dssp HHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHCSBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTTTTS-
T ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHHHhcCccCCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc-
Confidence 999999999999 999999999999999999974 56999999999999999999999999999999999998866432
Q ss_pred hhccCCCCCCCCCcccccchHHHHHHHHHccCcccCCCCCCCC
Q 014060 389 LVTSGHTRGADHGYSLFQGLAGTACIWFDLLEPVNARFPGYEL 431 (431)
Q Consensus 389 ~~~~~~~~~~~~~~gl~~G~aGI~~~Ll~l~~p~~~~~~~~~~ 431 (431)
...+.++.++|||+|+|||+++|+|+.+|++++||+|||
T Consensus 373 ----~~~~~~~~~~sL~~G~aGi~~~Ll~l~~p~~~~fp~~~~ 411 (411)
T 3e6u_A 373 ----HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 411 (411)
T ss_dssp ----SCCCCCSSTTSTTTSHHHHHHHHHHHTSGGGCCCTTTCC
T ss_pred ----ccCCCCCCCChhhccHHHHHHHHHHHcCCCcccCCCCCC
Confidence 233456778999999999999999999999999999997
No 2
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=100.00 E-value=2.8e-41 Score=340.13 Aligned_cols=326 Identities=15% Similarity=0.122 Sum_probs=232.8
Q ss_pred CCCccccccHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhhc-cCCcccccccchHHHHHHHHHHHHcC-CcchHHH
Q 014060 77 MDPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTCASVVRD-STRHVTFLCGRGGIYAIGAVVANRMG-DRSRRDF 154 (431)
Q Consensus 77 ~~~~LY~G~~Gial~l~~L~~~t~~~~~~~~a~~~l~~~~~~~~~-~~~~~~~~~G~~Gi~~l~~~~~~~~~-d~~~~~~ 154 (431)
.+.+||+|.+||++||.++++.+++++|.+.+++.++.+.+.+.. .....|+|+|.+|+++++..+++..+ .++.++.
T Consensus 29 ~~~sLy~G~aGial~l~~l~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~gl~~G~aGi~~~l~~l~~~~~~~~~~l~~ 108 (409)
T 2g0d_A 29 GELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLSTYGLLTGSLYSGAAGIALSILHLREDDEKYKNLLDS 108 (409)
T ss_dssp GGGSTTTSHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHHHHHHCCSCCCTTTSHHHHHHHHGGGTTTCHHHHHHHHH
T ss_pred CCCchhccHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHhCCCCCCcccccHHHHHHHHHHHHhccchHHHHHHH
Confidence 578999999999999999999999999999999999988776642 23567999999998655543332211 0112222
Q ss_pred HHHHHHHHHHh--ccCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCC
Q 014060 155 FLNLFLEIAQE--RALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTAC 232 (431)
Q Consensus 155 ~~~~~~~~~~~--~~l~~~~~~~~~~~~~D~l~G~aG~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~ 232 (431)
+.+.+...... ......+. ....+|+++|.||++++|+.+++ +.. .+.++++++++++..+.. ...
T Consensus 109 ~~~~~~~~~~~~l~~~~~~~~---~~~~~dl~~G~aGi~~~Ll~l~~----~~~-~~~~~~~~~~l~~~~~~~----~~~ 176 (409)
T 2g0d_A 109 LNRYIEYFVREKIEGFNLENI---TPPDYDVIEGLSGILSYLLLIND----EQY-DDLKILIINFLSNLTKEN----NGL 176 (409)
T ss_dssp HHHHHHHHHHHHHHTCCGGGC---CHHHHSSSSSHHHHHHHHTTCCC----GGG-HHHHHHHHHHHHHTTSCC----SSS
T ss_pred HHHHHHHHHHHHHHHhhhccC---CcccccHhcCHHHHHHHHHHccC----chh-HHHHHHHHHHHHHHHhcC----CCC
Confidence 22222221110 01110000 22468999999999999998862 111 357788888888753210 001
Q ss_pred CCccee---------------eccccCCCCcchHHHHHHHhcCC----CChHHHHHHHHHHHHHHhccC-CCCCC-CCC-
Q 014060 233 PLMYRW---------------HGTRYWGAANGLAGILQVLLHFP----LSEEDAEDVKGTLRYMMSNRF-PQSGN-YPV- 290 (431)
Q Consensus 233 ~~~~~w---------------~~~~~~G~aHG~aGI~~~L~~~~----~~~~~~~~i~~~l~~~~~~~~-~~~gn-w~~- 290 (431)
+ .|.. ++..++|||||.+||+++|+.++ .++++.+.++++++++.+..+ +.+|+ ||+
T Consensus 177 ~-~w~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g 255 (409)
T 2g0d_A 177 I-SLYIKSENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDG 255 (409)
T ss_dssp C-TTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSE
T ss_pred C-ceeecCCccccchhhhcCCCCCccCCchhhHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCc
Confidence 1 1111 12358999999999998877653 378899999999999977654 24677 998
Q ss_pred C-C---------CCCCCcccccccCchHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHc-CCCCCCccccchhhHHHHH
Q 014060 291 S-E---------GNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKN-GLVKKVGLADGAAGNAYAF 359 (431)
Q Consensus 291 ~-~---------~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~-g~~~~~~LCHG~aG~~~~L 359 (431)
. + .+..+.+++||||+|||+++++.+++.++ ++++.+.+.++++.+|++ +..++++||||.+|++++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~-d~~~~~~a~~~~~~~~~~~~~~~~~~LCHG~aG~~~~l 334 (409)
T 2g0d_A 256 LVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALD-NDYFVDKAEKILESAMQRKLGIDSYMICHGYSGLIEIC 334 (409)
T ss_dssp ECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHCTTCCSCCTTTSHHHHHHHH
T ss_pred cccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHhccCCCCCCCCChHHHHHHHH
Confidence 2 2 01233578999999999999999999999 999999999999999987 4456799999999999999
Q ss_pred HHHHHHhCCchHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCcccccchHHHHHHHHHccCccc
Q 014060 360 LSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHTRGADHGYSLFQGLAGTACIWFDLLEPVN 423 (431)
Q Consensus 360 l~l~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~G~aGI~~~Ll~l~~p~~ 423 (431)
+.+++.|++++|+++|.++.-. ....+ +..... .++|||+|.|||+++|+++.+|.+
T Consensus 335 ~~l~~~~~~~~~~~~a~~~~~~---~~~~~---g~~~~~-~~~gL~~G~AGi~~~Ll~l~~p~~ 391 (409)
T 2g0d_A 335 SLFKRLLNTKKFDSYMEEFNVN---SEQIL---EEYGDE-SGTGFLEGISGCILVLSKFEYSIN 391 (409)
T ss_dssp HHHHHHHCCCTTHHHHHHHHHT---HHHHH---HSCCST-TCSSTTTSHHHHHHHHHHHHSCCC
T ss_pred HHHHHHhCCHHHHHHHHHcCCc---chhhc---cccCCC-CCCceeCCHHHHHHHHHHhcCCCC
Confidence 9999999999999998874221 11110 111223 456999999999999999999976
No 3
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=99.93 E-value=9.8e-24 Score=211.58 Aligned_cols=278 Identities=16% Similarity=0.151 Sum_probs=193.8
Q ss_pred HHHHHHHHHHHHHHHhhc-cCCcccccccchHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHhccCCCCCCCCCCCCccc
Q 014060 104 ELLLSAEIIDTCASVVRD-STRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFLEIAQERALPAGPEEGGFGMSYD 182 (431)
Q Consensus 104 ~~~~a~~~l~~~~~~~~~-~~~~~~~~~G~~Gi~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~D 182 (431)
+...++++++++.+.++. .+.+.++|+|.+||.+++..+++.++|+++++.+.+.+..+. +.++ +...+
T Consensus 48 ~~~~~~~ll~~~~~~~~~~~~~~~~lY~G~~Gia~~l~~l~~~t~d~~yl~~a~~~l~~~~--~~l~--------~~~~~ 117 (411)
T 3e6u_A 48 LTNKIRELLQQMERGLKSADPRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSL--NCLT--------KRSIT 117 (411)
T ss_dssp HHHHHHHHHHHHHHHTTTSCTTCCCSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH--TTCC--------SCCCC
T ss_pred HHHHHHHHHHHHHhhcccCCCCCCCeeeChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH--HHhc--------ccCCc
Confidence 444566666666554432 245689999999998777888999999989888887777765 2332 24688
Q ss_pred ccccchHHHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCCCCcceeeccccCCCCcchHHHHHHHhcCC-
Q 014060 183 LLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWHGTRYWGAANGLAGILQVLLHFP- 261 (431)
Q Consensus 183 ~l~G~aG~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~~~~~~w~~~~~~G~aHG~aGI~~~L~~~~- 261 (431)
++.|.+|+++++..+++.+++ .+...++++++++.... . ......+-||.||++++|+.++
T Consensus 118 ~~~G~aG~l~~l~~ly~~~g~----~~~a~~~~~~l~~~~~~-~-------------~~~~~dll~G~AG~l~aLl~L~~ 179 (411)
T 3e6u_A 118 FLCGDAGPLAVAAVLYHKMNN----EKQAEDCITRLIHLNKI-D-------------PHAPNEMLYGRIGYIYALLFVNK 179 (411)
T ss_dssp TTTSTHHHHHHHHHHHHHTTC----HHHHHHHHHHHHGGGGG-C-------------TTCCSSTTTSHHHHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHHHHHhCC----HHHHHHHHHHHHHHhcc-c-------------ccCChhhhcCcHHHHHHHHHHHH
Confidence 999999999999999999887 34566666666654311 0 0013677899999999988653
Q ss_pred --CChHH-----HHHHHHHHHHHHhccCCCCCCCCCCC--CCCCCcccccccCchHHHHHHHHHHhhCCCCHHHHHHHHH
Q 014060 262 --LSEED-----AEDVKGTLRYMMSNRFPQSGNYPVSE--GNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIE 332 (431)
Q Consensus 262 --~~~~~-----~~~i~~~l~~~~~~~~~~~gnw~~~~--~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~a~~ 332 (431)
.++.+ .+.++.+++............|+... .-......+||||.+||+.+++.+.+.++ ++++.+.+.+
T Consensus 180 ~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~pl~~~w~~~~~~G~aHG~aGI~~~Ll~~~~~~~-~~~~~~~i~~ 258 (411)
T 3e6u_A 180 NFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVS-QGKLHSLVKP 258 (411)
T ss_dssp HHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSCCCCBTTBCBCSTTTSHHHHHHHHTCGGGCCC-HHHHHHTHHH
T ss_pred HcCCccchHHHHHHHHHHHHHHHHHHHHhccccCCCCcceeecCccCCcccccHHHHHHHHHHHHhhcC-hHHHHHHHHH
Confidence 23222 23344444443221000011111110 00123458999999999999999999998 9999999999
Q ss_pred HHHHHHHcCCC-----C--------CCccccchhhHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhhhhhhccCCCCCCC
Q 014060 333 AGEVLWKNGLV-----K--------KVGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHTRGAD 399 (431)
Q Consensus 333 ~~~~~~~~g~~-----~--------~~~LCHG~aG~~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 399 (431)
+.+.+.+.... . ..++|||.+|++.+++.+++.++++++++.|.+.++.+.... . ..
T Consensus 259 ~l~~l~~~~~~~g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g--------~--~~ 328 (411)
T 3e6u_A 259 SVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADVIWQYG--------L--LK 328 (411)
T ss_dssp HHHHHHHTCCTTSCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC--------S--BT
T ss_pred HHHHHHHhhccCCCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcC--------c--cC
Confidence 98877553221 0 147999999999999999999999999999988776554331 1 12
Q ss_pred CCcccccchHHHHHHHHHccC
Q 014060 400 HGYSLFQGLAGTACIWFDLLE 420 (431)
Q Consensus 400 ~~~gl~~G~aGI~~~Ll~l~~ 420 (431)
.++|||+|.||++++|+++..
T Consensus 329 ~~~~lChG~aG~~~~ll~~~~ 349 (411)
T 3e6u_A 329 KGYGLCHGSAGNAYAFLTLYN 349 (411)
T ss_dssp TCSCSTTSHHHHHHHHHHHHH
T ss_pred CCCceecChHHHHHHHHHHHH
Confidence 457999999999999999764
No 4
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=99.86 E-value=6.8e-21 Score=191.32 Aligned_cols=271 Identities=16% Similarity=0.073 Sum_probs=178.9
Q ss_pred CcccccccchHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhCC
Q 014060 124 RHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGA 203 (431)
Q Consensus 124 ~~~~~~~G~~Gi~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~i~~Ll~l~~~~~~ 203 (431)
...++++|.+||++++..+++.++++++.+.+.+.+..+... +... ......++.|.+|+++++..+.+..++
T Consensus 29 ~~~sLy~G~aGial~l~~l~~~~~~~~~~~~a~~~l~~~~~~--~~~~-----~~~~~gl~~G~aGi~~~l~~l~~~~~~ 101 (409)
T 2g0d_A 29 GELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSK--LSTY-----GLLTGSLYSGAAGIALSILHLREDDEK 101 (409)
T ss_dssp GGGSTTTSHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHH--HHHH-----CCSCCCTTTSHHHHHHHHGGGTTTCHH
T ss_pred CCCchhccHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHH--HHhC-----CCCCCcccccHHHHHHHHHHHHhccch
Confidence 358999999999887777777777766655444444333210 1000 113567899999999998877654321
Q ss_pred CCCchhhHHHHHHHHHHcchhccccCCCCCCcceeeccccCCCCcchHHHHHHHhcCCCChHHHHHHHHHHHHHHhccCC
Q 014060 204 GTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWHGTRYWGAANGLAGILQVLLHFPLSEEDAEDVKGTLRYMMSNRFP 283 (431)
Q Consensus 204 ~~~~~~~i~~~~~~il~~~~~~~~~~~~~~~~~~w~~~~~~G~aHG~aGI~~~L~~~~~~~~~~~~i~~~l~~~~~~~~~ 283 (431)
. .+.+.++.+.+..............+ ......++.||.+||+++|+.+. ++...+.++++++++.+....
T Consensus 102 ~---~~~l~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~dl~~G~aGi~~~Ll~l~-~~~~~~~~~~~~~~l~~~~~~ 172 (409)
T 2g0d_A 102 Y---KNLLDSLNRYIEYFVREKIEGFNLEN-----ITPPDYDVIEGLSGILSYLLLIN-DEQYDDLKILIINFLSNLTKE 172 (409)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHHTCCGGG-----CCHHHHSSSSSHHHHHHHHTTCC-CGGGHHHHHHHHHHHHHTTSC
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHhhhcc-----CCcccccHhcCHHHHHHHHHHcc-CchhHHHHHHHHHHHHHHHhc
Confidence 0 12333333222221111100000000 01235789999999999999875 566777888889998875431
Q ss_pred C--CCCCCCCCCC-----------CCCcccccccCchHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHHHHc------CC-
Q 014060 284 Q--SGNYPVSEGN-----------PRDKLVQWSHGATGVAITLCKASQVF-PSDREFRDAAIEAGEVLWKN------GL- 342 (431)
Q Consensus 284 ~--~gnw~~~~~~-----------~~~~~~~WChG~~Gi~~~l~~~~~~~-~~~~~~~~~a~~~~~~~~~~------g~- 342 (431)
. ..+|+....+ ......+||||.+||+..+..+++.. . ++.+.+.+.++.+.+.+. |.
T Consensus 173 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~ 251 (409)
T 2g0d_A 173 NNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYS-NEASLSALQKIIFIYEKFELERKKQFL 251 (409)
T ss_dssp CSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHCCCGGGTTC
T ss_pred CCCCCceeecCCccccchhhhcCCCCCccCCchhhHHHHHHHHHHHHHhCCC-ChhHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 1 1246443211 01235799999999998888887764 4 788999998888766221 11
Q ss_pred --------------------CCCCccccchhhHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhhhhhhccCCCCCCCCCc
Q 014060 343 --------------------VKKVGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHTRGADHGY 402 (431)
Q Consensus 343 --------------------~~~~~LCHG~aG~~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (431)
...+++|||.+|++++++.+++.++|++|++.|++.++.++++. . ....+
T Consensus 252 wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~~~~~~-------~---~~~~~ 321 (409)
T 2g0d_A 252 WKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRK-------L---GIDSY 321 (409)
T ss_dssp CCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC-------T---TCCSC
T ss_pred CCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-------c---CCCCC
Confidence 01379999999999999999999999999999998888776641 0 12468
Q ss_pred ccccchHHHHHHHHHccCc
Q 014060 403 SLFQGLAGTACIWFDLLEP 421 (431)
Q Consensus 403 gl~~G~aGI~~~Ll~l~~p 421 (431)
||++|.||++++|+++...
T Consensus 322 ~LCHG~aG~~~~l~~l~~~ 340 (409)
T 2g0d_A 322 MICHGYSGLIEICSLFKRL 340 (409)
T ss_dssp CTTTSHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHH
Confidence 9999999999999997653
No 5
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.84 E-value=0.00044 Score=67.70 Aligned_cols=153 Identities=15% Similarity=0.071 Sum_probs=101.9
Q ss_pred cCCCChHHHHHHHHHHHHHHhccCCCCC---CCCCCCCCCCC---cccccccCchHHHHHHHHHHhhCCCCHHHHHHHHH
Q 014060 259 HFPLSEEDAEDVKGTLRYMMSNRFPQSG---NYPVSEGNPRD---KLVQWSHGATGVAITLCKASQVFPSDREFRDAAIE 332 (431)
Q Consensus 259 ~~~~~~~~~~~i~~~l~~~~~~~~~~~g---nw~~~~~~~~~---~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~a~~ 332 (431)
++..|+++++.+.++.+++...+.++.| .|....+.... -..+.| ++.+|..++++++ +++|.+.|.+
T Consensus 102 ~ltg~~~~~~~~~~aA~~L~~r~~~~~g~i~sw~~~~~~~~~~~~iID~mm-----ni~~L~~A~~~~g-d~~y~~~A~~ 175 (377)
T 2ahf_A 102 IVEKDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCLL-----NLPLLLWAGEQTG-DPEYRRVAEA 175 (377)
T ss_dssp HHHCCHHHHHHHHHHHHHHHTTEETTTTEECCBSSTTCTTTTTEEEGGGGG-----GHHHHHHHHHHHC-CTHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHhCCCCCCeEEeccCCCCCCCCceEEechHH-----HHHHHHHHHHHhC-CHHHHHHHHH
Confidence 3457899999999999999886655333 24321111100 012222 2457788999999 9999999999
Q ss_pred HHHHHHHcC------------------C----------CCCCccccchhhHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Q 014060 333 AGEVLWKNG------------------L----------VKKVGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYH 384 (431)
Q Consensus 333 ~~~~~~~~g------------------~----------~~~~~LCHG~aG~~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~ 384 (431)
.++.+.+.- . ....++..|.+-.++.|+.+|+.|++++|++.|+++++++++
T Consensus 176 ~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~ 255 (377)
T 2ahf_A 176 HALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLA 255 (377)
T ss_dssp HHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHH
Confidence 887664321 1 112467778899999999999999999999999999999988
Q ss_pred hhhhhhccCC----CCCCCC--CcccccchHHHHHHHHHccC
Q 014060 385 NAQNLVTSGH----TRGADH--GYSLFQGLAGTACIWFDLLE 420 (431)
Q Consensus 385 ~~~~~~~~~~----~~~~~~--~~gl~~G~aGI~~~Ll~l~~ 420 (431)
...+ .+. ...+.. .+---.+.|+.++.|+++..
T Consensus 256 ~~~~---d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~ 294 (377)
T 2ahf_A 256 RVPE---DGVVYWDFEVPQEPSSYRDSSASAITACGLLEIAS 294 (377)
T ss_dssp TCCT---TSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHH
T ss_pred hhHH---hCCcccccCCCccCCCccCCCHHHHHHHHHHHHHH
Confidence 7532 111 001111 11123577888899998754
No 6
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.79 E-value=0.00052 Score=67.54 Aligned_cols=156 Identities=12% Similarity=0.029 Sum_probs=100.1
Q ss_pred CCCChHHHHHHHHHHHHHHhccCCCCCC---CCCCCCCCCCcccccccCchHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 014060 260 FPLSEEDAEDVKGTLRYMMSNRFPQSGN---YPVSEGNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEV 336 (431)
Q Consensus 260 ~~~~~~~~~~i~~~l~~~~~~~~~~~gn---w~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~a~~~~~~ 336 (431)
+..++++++.+.++.+++...+.++.|. |.... +..+ ..-|-=... .+.+|..++++++ +++|.+.|.+.++.
T Consensus 129 ltg~~~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~~-~~~~-~~~iID~~m-ni~~L~~A~~~~g-d~~y~~~A~~ha~~ 204 (397)
T 2zzr_A 129 INGDVKALEATIKAADKLMERYQEKGGFIQAWGELG-YKEH-YRLIIDCLL-NIQLLFFAYEQTG-DEKYRQVAVNHFYA 204 (397)
T ss_dssp HHCCHHHHHHHHHHHHHHHTTEETTTTEECCSSSTT-CGGG-CEEETTHHH-HTHHHHHHHHHHC-CHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHHhCcCCCEEEecccCC-CCCC-CceeechHh-HHHHHHHHHHHhC-CHHHHHHHHHHHHH
Confidence 3468999999999999998866553342 42111 1111 111211111 3456778889999 99999999988876
Q ss_pred HHHcC------------------C----------CCCCccccchhhHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhhhh
Q 014060 337 LWKNG------------------L----------VKKVGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQN 388 (431)
Q Consensus 337 ~~~~g------------------~----------~~~~~LCHG~aG~~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~~~~ 388 (431)
+.+.- . ....++..|.|-.++.|+.+|+.|+|++|++.|+++++++++...+
T Consensus 205 ~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~ 284 (397)
T 2zzr_A 205 SANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPE 284 (397)
T ss_dssp HHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCCT
T ss_pred HHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHH
Confidence 64322 1 1123566677889999999999999999999999999999887532
Q ss_pred -h--hccCCCC-CCCCCcccccchHHHHHHHHHccC
Q 014060 389 -L--VTSGHTR-GADHGYSLFQGLAGTACIWFDLLE 420 (431)
Q Consensus 389 -~--~~~~~~~-~~~~~~gl~~G~aGI~~~Ll~l~~ 420 (431)
. .+....+ .+..+.- -.|.|..++.|+++..
T Consensus 285 d~~pywdt~~~~~~~~~~D-~Sa~aiaA~~Ll~L~~ 319 (397)
T 2zzr_A 285 DKVSYWDLIFTDGSGQPRD-TSATATAVCGIHEMLK 319 (397)
T ss_dssp TSCCBSBTTCCTTSCCCBC-HHHHHHHHHHHHHHHT
T ss_pred hCCccccCCCCCCCCCcCC-CCHHHHHHHHHHHHHH
Confidence 0 0000000 0111111 3567778888998865
No 7
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.74 E-value=0.0019 Score=63.16 Aligned_cols=257 Identities=14% Similarity=0.004 Sum_probs=144.4
Q ss_pred HHHHH-HHHHHHhhhCCHHHHHHHHHHHHHHHHHhhcc----CCcccccccchHHHHHHHHHHHHcCCcchHHHHHHHHH
Q 014060 86 LGTAF-ICLRSYELTGNQQELLLSAEIIDTCASVVRDS----TRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFL 160 (431)
Q Consensus 86 ~Gial-~l~~L~~~t~~~~~~~~a~~~l~~~~~~~~~~----~~~~~~~~G~~Gi~~l~~~~~~~~~d~~~~~~~~~~~~ 160 (431)
.|+-. .+..+|+.|+|+++++.|.+..+.+.+.+.+. ..+.||.... -+...++.++|+++.+.+++...
T Consensus 44 ~GF~~g~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~~~~~~~HD~Gf~~~~-----s~~~~y~ltg~~~~~~~~~~aA~ 118 (377)
T 2ahf_A 44 DGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDRFENLDHHNIGFLYSL-----SAKAQWIVEKDESARKLALDAAD 118 (377)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTTTTTCCBSTHHHHHHT-----THHHHHHHHCCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhcccCCCCCCchHhhHH-----HHHHHHHHhCCHHHHHHHHHHHH
Confidence 44432 46778889999999999998887777655221 1123332221 12335778999998888887777
Q ss_pred HHHHhccCCCCCCCCCCCC------ccccc-ccchHHHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCC-
Q 014060 161 EIAQERALPAGPEEGGFGM------SYDLL-YGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTAC- 232 (431)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~------~~D~l-~G~aG~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~- 232 (431)
.++.. ..+.+.....+.. ..-++ .-.-- |.+|...++.+++++++ +.+.+.++.+++.... .+....
T Consensus 119 ~L~~r-~~~~~g~i~sw~~~~~~~~~~~~iID~mmn-i~~L~~A~~~~gd~~y~-~~A~~~a~~~l~~~~r--~dgs~~h 193 (377)
T 2ahf_A 119 VLMRR-WRADAGIIQAWGPKGDPENGGRIIIDCLLN-LPLLLWAGEQTGDPEYR-RVAEAHALKSRRFLVR--GDDSSYH 193 (377)
T ss_dssp HHHTT-EETTTTEECCBSSTTCTTTTTEEEGGGGGG-HHHHHHHHHHHCCTHHH-HHHHHHHHHHHHHTBB--TTSCBCS
T ss_pred HHHHh-CCCCCCeEEeccCCCCCCCCceEEechHHH-HHHHHHHHHHhCCHHHH-HHHHHHHHHHHHhCcC--CCCCeEE
Confidence 76631 1111000000110 01122 22222 66788888999987553 3444445555553211 000000
Q ss_pred -----CCc--c--eee--cc-ccCCCCcchHHHHHHHhcCC---CChHHHHHHHHHHHHHHhccCCCCC--CCCCCCCCC
Q 014060 233 -----PLM--Y--RWH--GT-RYWGAANGLAGILQVLLHFP---LSEEDAEDVKGTLRYMMSNRFPQSG--NYPVSEGNP 295 (431)
Q Consensus 233 -----~~~--~--~w~--~~-~~~G~aHG~aGI~~~L~~~~---~~~~~~~~i~~~l~~~~~~~~~~~g--nw~~~~~~~ 295 (431)
+.. + .|. +. ....||.|.|-.+++++.++ .++++++.+++..++.++.+ ++++ .|-...++.
T Consensus 194 ~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~~-~~d~~pywd~~~~~~ 272 (377)
T 2ahf_A 194 TFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLARV-PEDGVVYWDFEVPQE 272 (377)
T ss_dssp EEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC-CTTSSCBSBTTSCCC
T ss_pred EEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHhh-HHhCCcccccCCCcc
Confidence 000 0 011 10 12456788899998877654 68999999999999999875 5444 352222111
Q ss_pred -CCcccccccCchHHHHHHHHHHhhCC----CCHHHHHHHHHHHHHHHHcCCC-----CCCccccchhhH
Q 014060 296 -RDKLVQWSHGATGVAITLCKASQVFP----SDREFRDAAIEAGEVLWKNGLV-----KKVGLADGAAGN 355 (431)
Q Consensus 296 -~~~~~~WChG~~Gi~~~l~~~~~~~~----~~~~~~~~a~~~~~~~~~~g~~-----~~~~LCHG~aG~ 355 (431)
..... =-++++++.+++++.+.++ .+++|.+.|.++++.+...-+. .+.-|-||..+.
T Consensus 273 ~~~~~d--~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~~~~~~~g~L~h~~~~~ 340 (377)
T 2ahf_A 273 PSSYRD--SSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRDGYAERDDGEAEGFIRRGSYHV 340 (377)
T ss_dssp TTSCBC--HHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHHHTBCCCCSSCCCSBSCBCSBT
T ss_pred CCCccC--CCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecccccC
Confidence 00111 2455777788888998883 1567999999988777543211 124566766554
No 8
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.72 E-value=0.0024 Score=62.66 Aligned_cols=249 Identities=14% Similarity=0.047 Sum_probs=141.7
Q ss_pred CCccccccHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHHHHhhccCCcccccccchHHHHHHHHHHHHcCCcchHHHHH
Q 014060 78 DPTLYTGLLGTAFICLRSYEL-TGNQQELLLSAEIIDTCASVVRDSTRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFL 156 (431)
Q Consensus 78 ~~~LY~G~~Gial~l~~L~~~-t~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~G~~Gi~~l~~~~~~~~~d~~~~~~~~ 156 (431)
.-.+|. .+=++.+|+.++++ ++++.|++.|.+.++.+.+..... ..+++.-.. .-|.+
T Consensus 49 eK~l~~-nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~--~Gg~~~~~d-----------~dg~~------- 107 (388)
T 2gz6_A 49 DKFIWL-QNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDD--EGNWYFALT-----------RGGEP------- 107 (388)
T ss_dssp CEEHHH-HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCT--TSCBCSEEC-----------TTSCB-------
T ss_pred chhHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCC--CCCEEEEEc-----------CCCCc-------
Confidence 344553 45566778889998 899999999999999988875421 123332211 00100
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCCCCc-
Q 014060 157 NLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLM- 235 (431)
Q Consensus 157 ~~~~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~~~~- 235 (431)
+. ..-.+.+.|=++.++..+++.+++++++ +.++++.+.+++.-.. . ....
T Consensus 108 -----------~~----------~~~~~~~~af~i~al~~~y~~tg~~~~l-~~A~~~~~~i~~~~~d---~---~g~~~ 159 (388)
T 2gz6_A 108 -----------LV----------QPYNIFSDCFAAMAFSQYALASGEEWAK-DVAMQAYNNVLRRKDN---P---KGKYT 159 (388)
T ss_dssp -----------CC----------CCCCHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHTC---------------
T ss_pred -----------cc----------CCcchHHHHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHHHhcC---C---CcccC
Confidence 00 0112334555677888889999885443 3445555555543211 0 0000
Q ss_pred ceeecc-ccCCCCcchHH--HH-HHHhcCC---CChHHHHHHHHHHHHHHhccC-CCCCC--------CCCCCCCCCCcc
Q 014060 236 YRWHGT-RYWGAANGLAG--IL-QVLLHFP---LSEEDAEDVKGTLRYMMSNRF-PQSGN--------YPVSEGNPRDKL 299 (431)
Q Consensus 236 ~~w~~~-~~~G~aHG~aG--I~-~~L~~~~---~~~~~~~~i~~~l~~~~~~~~-~~~gn--------w~~~~~~~~~~~ 299 (431)
..+.+. ... |.++ ++ .+|+.++ .++++++.+++.++.+...+. +..|. |... +.....
T Consensus 160 ~~~~~~~~~~----~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~-~~~~~~- 233 (388)
T 2gz6_A 160 KTYPGTRPMK----ALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHI-DCFEGR- 233 (388)
T ss_dssp -----CCCCE----ETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTSCCC-CSTTTT-
T ss_pred cccCCCCCCC----CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCCCCC-CCcccC-
Confidence 001111 112 2222 22 3455543 567888999999998876543 22232 2110 000000
Q ss_pred cccccCchH----HHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHcCCCCC-Cccccch--------------------hh
Q 014060 300 VQWSHGATG----VAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGA--------------------AG 354 (431)
Q Consensus 300 ~~WChG~~G----i~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~-~~LCHG~--------------------aG 354 (431)
.=.|| .+..++.++++++ ++++.+.|.++.+.+++.|.... .++||.. +=
T Consensus 234 ----~~~pgh~~e~a~lL~~~~~~tg-d~~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~~~g~~~~~~~~~~~~~W~qae 308 (388)
T 2gz6_A 234 ----LINPGHGIEAMWFIMDIARRKN-DSKTINQAVDVVLNILNFAWDNEYGGLYYFMDAAGHPPQQLEWDQKLWWVHLE 308 (388)
T ss_dssp ----EECHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHBCTTTCSBCSCEETTSCCCSCTTTTCEEHHHHHH
T ss_pred ----cCCCCHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHH
Confidence 02345 3335778888999 99999999999888776654322 3444321 22
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHHHHHhh
Q 014060 355 NAYAFLSLYRLTGETIYVERANAFSSFLYHNA 386 (431)
Q Consensus 355 ~~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~~ 386 (431)
.+.+++.+|+.|++++|++.++++.+++.+..
T Consensus 309 ~i~a~~~ly~~tgd~~yl~~a~~~~~~~~~~~ 340 (388)
T 2gz6_A 309 SLVALAMGYRLTGRDACWAWYQKMHDYSWQHF 340 (388)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 35667789999999999999999998876654
No 9
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.70 E-value=0.0052 Score=60.31 Aligned_cols=285 Identities=13% Similarity=0.033 Sum_probs=154.2
Q ss_pred CCChHHHHHHHHHHHHHHHHhhccCCC-CCCCCCCCCCCCcccccc---HHHH-HHHHHHHhhhCCHHHHHHHHHHHHHH
Q 014060 41 SLPCETFLKAAVSLKDQVVEVTWRRGS-GGGGEPGRGMDPTLYTGL---LGTA-FICLRSYELTGNQQELLLSAEIIDTC 115 (431)
Q Consensus 41 ~~~~~~~l~~A~~i~~~l~~~~w~~~~-~~~~~~~~~~~~~LY~G~---~Gia-l~l~~L~~~t~~~~~~~~a~~~l~~~ 115 (431)
..+++++.+...++.+.+++.-=.... ..........+.-.+... .|+. ..+..+|+.|+|++|++.+.+.++..
T Consensus 21 ~~~~~~~~~~l~~~~~~l~~~~~~~~~f~~~~~~~~~~d~k~~~~W~Wt~G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~ 100 (382)
T 3pmm_A 21 FIARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGWAGWEWTHGVGLYGIYQYYQQTGDIEMRDIIDRWFADR 100 (382)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCCCTTCTTCEECTTSCEECSSSTTSCSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhccCccccccccCCccccccCCCCcCccccHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 356777777777777887653100000 000000000111122222 2443 34678899999999999999888766
Q ss_pred HHHhhccCCcccccccchHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHhc-cCCCCCCCCC---CCCc-ccccccchHH
Q 014060 116 ASVVRDSTRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFLEIAQER-ALPAGPEEGG---FGMS-YDLLYGRAGF 190 (431)
Q Consensus 116 ~~~~~~~~~~~~~~~G~~Gi~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~l~~~~~~~~---~~~~-~D~l~G~aG~ 190 (431)
...-.. ..+. =.+..+. .+ ..+|+.++|+++++.+.+..+.+.... ..+.|.-... +... .-++.|.--.
T Consensus 101 ~~~~~~-~~n~--D~~~~~~-~l-~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~WiDgl~M~ 175 (382)
T 3pmm_A 101 FAEGAT-TKNV--NTMAPFL-TL-AYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMWDDTLMMT 175 (382)
T ss_dssp HHHCCC-CCCT--TTTTTHH-HH-HHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEETTHHHHT
T ss_pred HcCCCC-cCcc--cchHHHH-HH-HHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCCcEEecchhhh
Confidence 542110 1111 1223332 22 457889999999998887777664210 0001000000 0011 1134565555
Q ss_pred HHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCCCCcceee--cc---ccCCCCcchHHHHHHHhc------
Q 014060 191 LWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWH--GT---RYWGAANGLAGILQVLLH------ 259 (431)
Q Consensus 191 i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~~~~~~w~--~~---~~~G~aHG~aGI~~~L~~------ 259 (431)
+..|..+++.++++ +++..+..++....+.+.+...... ...|. +. ...-||.|.+=.++++.+
T Consensus 176 ~p~La~~~~~tgd~----~y~d~A~~q~~~~~~~l~D~~tGl~-~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~ 250 (382)
T 3pmm_A 176 VLPLAKIGKLLNRP----QYVEEATYQFLLHVQNLMDRETGLW-FHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVD 250 (382)
T ss_dssp HHHHHHHHHHTTCH----HHHHHHHHHHHHHHHHHBCTTTSCB-CSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCH----HHHHHHHHHHHHHHHHccCCCCCCe-eeeccCCCCCCCCcceecccccHHHHHHHHHHHhhc
Confidence 66778889999984 4555555554444444432211110 11232 11 124467777766655543
Q ss_pred CCC----ChHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccccCchHHHHHHHHHHh--hCCCCHHHHHHHHHH
Q 014060 260 FPL----SEEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPRDKLVQWSHGATGVAITLCKASQ--VFPSDREFRDAAIEA 333 (431)
Q Consensus 260 ~~~----~~~~~~~i~~~l~~~~~~~~~~~gnw~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~--~~~~~~~~~~~a~~~ 333 (431)
++. .+++.+.+++.++++.+.+.+ +|.|....+.... .-=-=|++.++.+++...+ .+ +++|...|+++
T Consensus 251 ~p~~~~~~~~~~~~~~~~a~~~~~~q~~-~G~W~~~~d~~~~--y~EsSatA~~ay~ll~~~~~g~l--~~~Y~~~a~ka 325 (382)
T 3pmm_A 251 LPEGNAVRRYLITVLDAQIAALAECQDD-SGLWHTLLDDPHS--YLEASATAGFAYGILKAVRKRYV--GQHYAGVAEKA 325 (382)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHCCT-TSCEESBTTCTTS--CEEHHHHHHHHHHHHHHHHTTSS--CGGGHHHHHHH
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHcCCC-CCChhhccCCCCC--CccccHHHHHHHHHHHHHHcCCC--cHHHHHHHHHH
Confidence 221 245678889999999987764 8899755432211 1122367777888888777 44 56799999999
Q ss_pred HHHHHHc
Q 014060 334 GEVLWKN 340 (431)
Q Consensus 334 ~~~~~~~ 340 (431)
.+.+.+.
T Consensus 326 ~~~l~~~ 332 (382)
T 3pmm_A 326 IRGIVQN 332 (382)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 8887653
No 10
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.69 E-value=0.0033 Score=61.74 Aligned_cols=233 Identities=14% Similarity=0.048 Sum_probs=137.8
Q ss_pred HH-HHHHHHHHHHcCCcchHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhCCCCCchhhHH
Q 014060 134 GI-YAIGAVVANRMGDRSRRDFFLNLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLM 212 (431)
Q Consensus 134 Gi-~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~i~~Ll~l~~~~~~~~~~~~~i~ 212 (431)
|+ +..+..+++.+||+++++.+.+.++....+ ..+ ..+.| .+..|. +++.+|+.+++++++ +.+.
T Consensus 71 G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~~-~~~--------~~n~D--~~~~~~--~l~~lY~~Tgd~~Yl-~~a~ 136 (382)
T 3pmm_A 71 GVGLYGIYQYYQQTGDIEMRDIIDRWFADRFAE-GAT--------TKNVN--TMAPFL--TLAYRFEETGRMAYL-PWLE 136 (382)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-CCC--------CCCTT--TTTTHH--HHHHHHHHHCCGGGH-HHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHcC-CCC--------cCccc--chHHHH--HHHHHHHHhCCHHHH-HHHH
Confidence 54 233455788999999998887777666532 111 11222 234443 678999999997664 4566
Q ss_pred HHHHHHHHcchhccccCCCCCCccee-ecc--ccCCCCcchHHHHHHHhc---CCCChHHHHHH-HHHHHHHHhccCCCC
Q 014060 213 PIVDAVLAGGRAGATANTACPLMYRW-HGT--RYWGAANGLAGILQVLLH---FPLSEEDAEDV-KGTLRYMMSNRFPQS 285 (431)
Q Consensus 213 ~~~~~il~~~~~~~~~~~~~~~~~~w-~~~--~~~G~aHG~aGI~~~L~~---~~~~~~~~~~i-~~~l~~~~~~~~~~~ 285 (431)
++++.+++........ ..|.+ .+. ..--|+.|..-.+..|++ ...++++.+.+ ++...+...+++++.
T Consensus 137 ~~ad~L~~~~~r~~~G-----gf~~~~~~~~~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~~t 211 (382)
T 3pmm_A 137 SWAEWAMHEMPRTEQG-----GMQHMTLAEENHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRET 211 (382)
T ss_dssp HHHHHHHHTSCBCGGG-----CBCCCCSSCCCTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTT
T ss_pred HHHHHHHhhCCCCcCC-----CeeeecCCCCCCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHccCCCC
Confidence 6677666532111100 00100 001 112235554333334444 34788887765 445555555566667
Q ss_pred CCCCCCC---CCCCCcccccccCchHHHHHHHHHHhh--CCC----CHHHHHHHHHHHHHHHHc----CC----CCC---
Q 014060 286 GNYPVSE---GNPRDKLVQWSHGATGVAITLCKASQV--FPS----DREFRDAAIEAGEVLWKN----GL----VKK--- 345 (431)
Q Consensus 286 gnw~~~~---~~~~~~~~~WChG~~Gi~~~l~~~~~~--~~~----~~~~~~~a~~~~~~~~~~----g~----~~~--- 345 (431)
|.|.+.. +........|+.|..=.+.++..+.+. ++. ++++.+.+++.++.+.+. |+ +..
T Consensus 212 Gl~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~~~G~W~~~~d~~~~ 291 (382)
T 3pmm_A 212 GLWFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSGLWHTLLDDPHS 291 (382)
T ss_dssp SCBCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCCTTSCEESBTTCTTS
T ss_pred CCeeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCCCCCChhhccCCCCC
Confidence 8775533 111123478999999999998888876 321 456777777777766543 22 111
Q ss_pred CccccchhhHHHHHHHHHHH--hCCchHHHHHHHHHHHHHHhh
Q 014060 346 VGLADGAAGNAYAFLSLYRL--TGETIYVERANAFSSFLYHNA 386 (431)
Q Consensus 346 ~~LCHG~aG~~~~Ll~l~~~--t~~~~~~~~a~~~~~~~~~~~ 386 (431)
+-=--|.+..+++|++..+. . +++|++.|++..+-+++..
T Consensus 292 y~EsSatA~~ay~ll~~~~~g~l-~~~Y~~~a~ka~~~l~~~i 333 (382)
T 3pmm_A 292 YLEASATAGFAYGILKAVRKRYV-GQHYAGVAEKAIRGIVQNI 333 (382)
T ss_dssp CEEHHHHHHHHHHHHHHHHTTSS-CGGGHHHHHHHHHHHHHTB
T ss_pred CccccHHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHHhhC
Confidence 22233788889999998883 3 4789999999888887754
No 11
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.67 E-value=0.0079 Score=59.08 Aligned_cols=239 Identities=10% Similarity=0.055 Sum_probs=136.8
Q ss_pred HHHHH-HHHHHHhhhCCHHHHHHHHHHHHHHHHHhhcc----CCcccccccchHHHHHHHHHHHHcCCcchHHHHHHHHH
Q 014060 86 LGTAF-ICLRSYELTGNQQELLLSAEIIDTCASVVRDS----TRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFL 160 (431)
Q Consensus 86 ~Gial-~l~~L~~~t~~~~~~~~a~~~l~~~~~~~~~~----~~~~~~~~G~~Gi~~l~~~~~~~~~d~~~~~~~~~~~~ 160 (431)
+|+-. .+..+|+.|+|++|++.|.+..+.+...+... ..+.||....+ +...++.++|+++.+.+++...
T Consensus 70 ~GF~~G~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~~~~~~~HD~GF~~~~s-----~~~~y~ltg~~~~~~~~~~aA~ 144 (397)
T 2zzr_A 70 NGFWTGCLWLAYEYNQDKKLKNIAHKNVLSFLNRINNRIALDHHDLGFLYTPS-----CTAEYRINGDVKALEATIKAAD 144 (397)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTCSCCSSTHHHHHTTT-----HHHHHHHHCCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhhhcccCCCCCchHHHHHH-----HHHHHHHhCCHHHHHHHHHHHH
Confidence 44432 46778889999999999988887776654321 13344444332 2235678899998888887777
Q ss_pred HHHHhccCCCCCCCCCCC-----CcccccccchHHHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCCCCc
Q 014060 161 EIAQERALPAGPEEGGFG-----MSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLM 235 (431)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~-----~~~D~l~G~aG~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~~~~ 235 (431)
.+... .-+.+.-...++ ..+-++--.-=-+.+|...++.+++++++ +.+.+.++.+++.. .+. + ....
T Consensus 145 ~L~~r-~~~~~g~iqsw~~~~~~~~~~~iID~~mni~~L~~A~~~~gd~~y~-~~A~~ha~~~l~~~---~r~-d-gs~~ 217 (397)
T 2zzr_A 145 KLMER-YQEKGGFIQAWGELGYKEHYRLIIDCLLNIQLLFFAYEQTGDEKYR-QVAVNHFYASANNV---VRD-D-SSAF 217 (397)
T ss_dssp HHHTT-EETTTTEECCSSSTTCGGGCEEETTHHHHTHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHT---BCT-T-SCBC
T ss_pred HHHHH-hCcCCCEEEecccCCCCCCCceeechHhHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHHhC---cCC-C-CCeE
Confidence 77631 111100000011 11122222111355677778889985443 23333444444432 111 0 0001
Q ss_pred ceee-----cc-----cc------CCCCcchHHHHHHHhcCC---CChHHHHHHHHHHHHHHhccCCCCC--CCCCCCCC
Q 014060 236 YRWH-----GT-----RY------WGAANGLAGILQVLLHFP---LSEEDAEDVKGTLRYMMSNRFPQSG--NYPVSEGN 294 (431)
Q Consensus 236 ~~w~-----~~-----~~------~G~aHG~aGI~~~L~~~~---~~~~~~~~i~~~l~~~~~~~~~~~g--nw~~~~~~ 294 (431)
..+. +. .. ..||.|.|-.+++++.++ .++++++.+++..++.++.. ++++ .|-...+.
T Consensus 218 h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~-~~d~~pywdt~~~~ 296 (397)
T 2zzr_A 218 HTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRL-PEDKVSYWDLIFTD 296 (397)
T ss_dssp SEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTC-CTTSCCBSBTTCCT
T ss_pred EEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhh-HHhCCccccCCCCC
Confidence 1111 10 01 246778898888877654 68999999999999998865 5333 46322211
Q ss_pred C-CCcccccccCchHHHHHHHHHHhhCCCC---HH--HHHHHHHHHHHHHHc
Q 014060 295 P-RDKLVQWSHGATGVAITLCKASQVFPSD---RE--FRDAAIEAGEVLWKN 340 (431)
Q Consensus 295 ~-~~~~~~WChG~~Gi~~~l~~~~~~~~~~---~~--~~~~a~~~~~~~~~~ 340 (431)
. ..... =.|++.++..++.+.+.++ + ++ |.+.|.++++.+...
T Consensus 297 ~~~~~~D--~Sa~aiaA~~Ll~L~~~~~-~~~~~~~~Y~~~A~~~l~~l~~~ 345 (397)
T 2zzr_A 297 GSGQPRD--TSATATAVCGIHEMLKYLP-EVDPDKETYKYAMHTMLRSLIEQ 345 (397)
T ss_dssp TSCCCBC--HHHHHHHHHHHHHHHTTSC-TTCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCC--CCHHHHHHHHHHHHHHhcC-ccchhhHHHHHHHHHHHHHHHHH
Confidence 1 01111 2456667777888888887 5 67 999999998777543
No 12
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.42 E-value=0.12 Score=51.38 Aligned_cols=293 Identities=12% Similarity=-0.027 Sum_probs=156.7
Q ss_pred CcccCCCCChHHHHHHHHHHHHHHHHhhccCCC-CCCCCC-CC--C------C---CCcc--ccccHHHH-HHHHHHHhh
Q 014060 35 TAAINMSLPCETFLKAAVSLKDQVVEVTWRRGS-GGGGEP-GR--G------M---DPTL--YTGLLGTA-FICLRSYEL 98 (431)
Q Consensus 35 ~~~~~~~~~~~~~l~~A~~i~~~l~~~~w~~~~-~~~~~~-~~--~------~---~~~L--Y~G~~Gia-l~l~~L~~~ 98 (431)
||-.+-..+++++.+.+..|.++|...+-.... ...++. .. . + ...+ |.- |+. ..+.++++.
T Consensus 20 ~~~~~~~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~--Gv~l~gl~~ay~~ 97 (445)
T 3k11_A 20 YQGTYGDLTPEQVKKDIDRVFAYIDKETPARVVDKNTGKVITDYTAMGDEAQLERGAFRLASYEW--GVTYSALIAAAET 97 (445)
T ss_dssp CSSCCSCCCHHHHHHHHHHHHHHHHHTSCCCEEETTTCCEECCTTTCCTTEEECCCSSCTTSHHH--HHHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHHhccCcceeecCCCCceeccccccccccccccCCcccCccCH--HHHHHHHHHHHHH
Confidence 666667789999999999999999863311111 000010 00 0 0 1111 332 443 347889999
Q ss_pred hCCHHHHHHHHHHHHHHHHHh-------hccCCc-----cccccc---chH-HHHHHHHHHHHcCCcchHHHHHHHHHHH
Q 014060 99 TGNQQELLLSAEIIDTCASVV-------RDSTRH-----VTFLCG---RGG-IYAIGAVVANRMGDRSRRDFFLNLFLEI 162 (431)
Q Consensus 99 t~~~~~~~~a~~~l~~~~~~~-------~~~~~~-----~~~~~G---~~G-i~~l~~~~~~~~~d~~~~~~~~~~~~~~ 162 (431)
|+|++|++.+.+.++.+.+.. +..... .++..| ..| +...+..+++.++++++++.+.+..+.+
T Consensus 98 Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LDD~g~~~~~Li~lY~~T~d~~yl~~a~~~ad~L 177 (445)
T 3k11_A 98 TGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDDAGAVCTAMIKLRLKDESLPVDGLIQNYFDFI 177 (445)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGGGTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcchhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999999999998887665421 111110 001111 224 2222334678889999998888777777
Q ss_pred HHhccCCCCCCCCC-C---CC-cccccccchHHHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCCCCcce
Q 014060 163 AQERALPAGPEEGG-F---GM-SYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYR 237 (431)
Q Consensus 163 ~~~~~l~~~~~~~~-~---~~-~~D~l~G~aG~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~~~~~~ 237 (431)
.. ..+.. ..++ + .. .-=++.|.-=....|....+.+++++ ..++..+..++....+.+.+...... ...
T Consensus 178 ~~--~~pRt-~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~~~tgd~~--~~y~d~A~~q~~~~~~~l~D~~tGL~-~Hg 251 (445)
T 3k11_A 178 IN--KEYRL-ADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAK--NKYLAEAVKQFLQFADRMFIPEKGLY-RHG 251 (445)
T ss_dssp HH--TSCBC-TTCCBCBCSSSTTEEETHHHHHHHHHHHHHHHHCGGGH--HHHHHHHHHHHHHHHHHHEETTTTEE-CSE
T ss_pred HH--cCCCC-CCCceeecCCCCCceEecchhhHHHHHHHHHHHHCCcc--hHHHHHHHHHHHHHHHhcccCCCCCE-eee
Confidence 63 22211 1111 0 01 11134454233445666777888742 00455555554444444332211100 012
Q ss_pred eeccc----cCCCCcchHHHHHHHhc----CC----CChHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccccC
Q 014060 238 WHGTR----YWGAANGLAGILQVLLH----FP----LSEEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPRDKLVQWSHG 305 (431)
Q Consensus 238 w~~~~----~~G~aHG~aGI~~~L~~----~~----~~~~~~~~i~~~l~~~~~~~~~~~gnw~~~~~~~~~~~~~WChG 305 (431)
|.... ..-|+-|.+=.+.+|.+ ++ ..+++.+.+++.++.+.+.+.+ +|.|....+.... .-=-=|
T Consensus 252 ~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~-~G~W~~vld~~~~--y~EsSa 328 (445)
T 3k11_A 252 WVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSG-EGFWHQLLDCNDS--YLETSA 328 (445)
T ss_dssp EETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCT-TSCEESBTTCTTS--CEEHHH
T ss_pred ecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCC-CCchhhccCCCCC--CCCccH
Confidence 32111 12344444433333332 33 2345678889999999987754 8899654432211 111235
Q ss_pred chHHHHHHHHHHhh--CCCCHHHHHHHHHHHHHHHH
Q 014060 306 ATGVAITLCKASQV--FPSDREFRDAAIEAGEVLWK 339 (431)
Q Consensus 306 ~~Gi~~~l~~~~~~--~~~~~~~~~~a~~~~~~~~~ 339 (431)
++.++.+++.+.+. ++ .++|...|+++.+.+.+
T Consensus 329 TAmfaygllkgvr~G~Ld-~~~Y~~~A~ka~~~L~~ 363 (445)
T 3k11_A 329 TAIYVYCLAHAINKGWID-AIAYGPVAQLGWHAVAG 363 (445)
T ss_dssp HHHHHHHHHHHHHHTSSC-HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHHHHH
Confidence 67777777777663 33 45799999999887754
No 13
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.33 E-value=0.00081 Score=65.91 Aligned_cols=209 Identities=11% Similarity=0.063 Sum_probs=115.8
Q ss_pred HHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCCCCcceeeccccCCCCcchHHHH-HHHhcCCCChHHHHH
Q 014060 191 LWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWHGTRYWGAANGLAGIL-QVLLHFPLSEEDAED 269 (431)
Q Consensus 191 i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~~~~~~w~~~~~~G~aHG~aGI~-~~L~~~~~~~~~~~~ 269 (431)
+.++..+++.+++++++ +.+++.++.+++... ... |.... +-+=..|.. ..|.+...++++++.
T Consensus 47 ~~gl~~~y~~tgd~~y~-~~a~~~~~~~~~~~g---------~l~--~~~~~---lDd~~~g~~ll~lY~~Tgd~~yl~~ 111 (373)
T 1nc5_A 47 LCGVLRLWEATGEKRYF-EYAKAYADLLIDDNG---------NLL--FRRDE---LDAIQAGLILFPLYEQTKDERYVKA 111 (373)
T ss_dssp HHHHHHHHHHHCCHHHH-HHHHHHHHHHBCTTC---------CBC--CCTTC---GGGTGGGGGHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHhCCHHHH-HHHHHHHHHHhCCCC---------ccc--CCCCC---cchHHHHHHHHHHHHHhCCHHHHHH
Confidence 55788889999985442 344444444432100 011 21111 111112333 334555578999999
Q ss_pred HHHHHHHHHhccCCCC-CCCCCCCCCCCCcccccccCchHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHcCCCCCCcc
Q 014060 270 VKGTLRYMMSNRFPQS-GNYPVSEGNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKKVGL 348 (431)
Q Consensus 270 i~~~l~~~~~~~~~~~-gnw~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~L 348 (431)
+....+++.......+ +.|-... .....||-|..-.+..++.++++++ +++|.+.|.+..+.+.+.-.....+|
T Consensus 112 a~~la~~l~~~~r~~~G~fw~~~~----~~~~~w~D~l~m~~p~L~~l~~~tg-d~~y~d~A~~~~~~~~~~l~D~~tGl 186 (373)
T 1nc5_A 112 AKRLRSLYGTLNRTSEGGFWHKDG----YPYQMWLDGLYMGGPFALKYANLKQ-ETELFDQVVLQESLMRKHTKDAKTGL 186 (373)
T ss_dssp HHHHHGGGGTSCBCTTSCBCSCTT----STTEEETHHHHHHHHHHHHHHHHHT-CTHHHHHHHHHHHHHHHHHBCTTTSC
T ss_pred HHHHHHHHHhccCCCCCCeeccCC----CCCeEEeCcHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9998888866443323 3453211 1124699998777778889999999 99999999887765543311111222
Q ss_pred c-c---------------ch------hhHHHH---HHHHHHH-----hCCchHHHHHHHHHHHHHHhhh--hhhccCCCC
Q 014060 349 A-D---------------GA------AGNAYA---FLSLYRL-----TGETIYVERANAFSSFLYHNAQ--NLVTSGHTR 396 (431)
Q Consensus 349 C-H---------------G~------aG~~~~---Ll~l~~~-----t~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~ 396 (431)
+ | |. -|++.+ +.++++. ++++.+++.++++++.+++... ...+..-+.
T Consensus 187 ~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~dG~W~~~ld 266 (373)
T 1nc5_A 187 FYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWYQIVD 266 (373)
T ss_dssp BCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTTTSCCBSBTT
T ss_pred EEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCCCCCceeeecC
Confidence 2 3 21 155544 4445555 3456788888888888876532 111111111
Q ss_pred CCCCCcccc--cchHHHHHHHHHcc
Q 014060 397 GADHGYSLF--QGLAGTACIWFDLL 419 (431)
Q Consensus 397 ~~~~~~gl~--~G~aGI~~~Ll~l~ 419 (431)
.+..+-++. .|.|.++|+|++..
T Consensus 267 ~~~~~~~~~EsSatA~~ay~l~~g~ 291 (373)
T 1nc5_A 267 KGDRSDNWLESSGSCLYMYAIAKGI 291 (373)
T ss_dssp CTTSTTCCBCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccccHHHHHHHHHHHHH
Confidence 111111222 36777888888864
No 14
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.19 E-value=0.025 Score=55.14 Aligned_cols=241 Identities=15% Similarity=0.054 Sum_probs=124.0
Q ss_pred HHH-HHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhhcc---CCcccccccchHHHHHHHHHHHHcCCcchHHHHHHHHHH
Q 014060 86 LGT-AFICLRSYELTGNQQELLLSAEIIDTCASVVRDS---TRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFLE 161 (431)
Q Consensus 86 ~Gi-al~l~~L~~~t~~~~~~~~a~~~l~~~~~~~~~~---~~~~~~~~G~~Gi~~l~~~~~~~~~d~~~~~~~~~~~~~ 161 (431)
.|+ ...+..++++|+|++|++.+.+.++.+...-... ....+-+ ..|. .+..+|+.++|+++++.+.+..+.
T Consensus 43 ~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~~~~g~l~~~~~~lDd~--~~g~--~ll~lY~~Tgd~~yl~~a~~la~~ 118 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDELDAI--QAGL--ILFPLYEQTKDERYVKAAKRLRSL 118 (373)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHBCTTCCBCCCTTCGGGT--GGGG--GHHHHHHHHCCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCcccCCCCCcchH--HHHH--HHHHHHHHhCCHHHHHHHHHHHHH
Confidence 344 3357788999999999999998888754210000 0001111 1222 123357888999988776665554
Q ss_pred HHHhccCCCCCCCCC-CC----CcccccccchHHHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCCCCcc
Q 014060 162 IAQERALPAGPEEGG-FG----MSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMY 236 (431)
Q Consensus 162 ~~~~~~l~~~~~~~~-~~----~~~D~l~G~aG~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~~~~~ 236 (431)
+. ..+ ....++ +. ....++.|..-.+..|..+++.++++++ +..+.+++....+.+.+...... ..
T Consensus 119 l~---~~~-r~~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y----~d~A~~~~~~~~~~l~D~~tGl~-~h 189 (373)
T 1nc5_A 119 YG---TLN-RTSEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETEL----FDQVVLQESLMRKHTKDAKTGLF-YH 189 (373)
T ss_dssp GG---TSC-BCTTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHH----HHHHHHHHHHHHHHHBCTTTSCB-CS
T ss_pred HH---hcc-CCCCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHhcCCCCCCE-Ee
Confidence 42 111 111111 10 1122455665556678888999999644 33333332222223322111111 11
Q ss_pred eeecccc-------CCC--CcchHHHHHHHh---c----CCC----ChHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCC
Q 014060 237 RWHGTRY-------WGA--ANGLAGILQVLL---H----FPL----SEEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPR 296 (431)
Q Consensus 237 ~w~~~~~-------~G~--aHG~aGI~~~L~---~----~~~----~~~~~~~i~~~l~~~~~~~~~~~gnw~~~~~~~~ 296 (431)
.|..... .|+ ++=.-|.+|+++ + ++. ++++++.+++.++++.+.+.+++|.|....+...
T Consensus 190 ~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~dG~W~~~ld~~~ 269 (373)
T 1nc5_A 190 AWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWYQIVDKGD 269 (373)
T ss_dssp EEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTTTSCCBSBTTCTT
T ss_pred ecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCCCCCceeeecCCCC
Confidence 2221111 122 122335544322 2 222 3457788899999999887655888975332110
Q ss_pred -CcccccccCchHHHHHHHHHHhh-CCCCHHHHHHHHHHHHHHHHc
Q 014060 297 -DKLVQWSHGATGVAITLCKASQV-FPSDREFRDAAIEAGEVLWKN 340 (431)
Q Consensus 297 -~~~~~WChG~~Gi~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~ 340 (431)
+...-=--|++.++.+++...+. .- +++|.+.++++.+.+.+.
T Consensus 270 ~~~~~~EsSatA~~ay~l~~g~~~g~l-~~~Y~~~a~k~~~~l~~~ 314 (373)
T 1nc5_A 270 RSDNWLESSGSCLYMYAIAKGINKGYL-DRAYETTLLKAYQGLIQH 314 (373)
T ss_dssp STTCCBCHHHHHHHHHHHHHHHHHTSS-CGGGHHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHHHHHCCCC-cHHHHHHHHHHHHHHHHh
Confidence 00001112456666666665432 12 568999999998887663
No 15
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=96.99 E-value=0.057 Score=52.13 Aligned_cols=234 Identities=13% Similarity=0.054 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHcCCcchHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhCCCCCchhhHHH
Q 014060 134 GIYAIGAVVANRMGDRSRRDFFLNLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMP 213 (431)
Q Consensus 134 Gi~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~i~~Ll~l~~~~~~~~~~~~~i~~ 213 (431)
|.+..+.-.++.++|+++.+.+.+.+..+..++. +.-. .....|. |. .+.+++.+|+.+++++++ +.+++
T Consensus 50 ~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~---~~~~--~~~~DD~--a~--~~la~~~aye~t~~~~yL-~~A~~ 119 (349)
T 3k7x_A 50 HLVEVRLDAYLRTKKQADLEVAEKTYLHNKNRNG---GTLI--HDFYDDM--LW--NALAAYRLYKATGKSIYL-EDAQL 119 (349)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTT---SSSC--CSBHHHH--HH--HHHHHHHHHHHHCCHHHH-HHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC---CCCC--ccCccHH--HH--HHHHHHHHHHHHCCchHH-HHHHH
Confidence 4434444466788999998887776665543211 0000 1122332 22 346889999999986553 34445
Q ss_pred HHHHHHHcchhccccCCCCCCcceeecc--ccCCCCcchHHHHHHHhcC---CCChHHHHHHHHHHHHHHhccCCCCCCC
Q 014060 214 IVDAVLAGGRAGATANTACPLMYRWHGT--RYWGAANGLAGILQVLLHF---PLSEEDAEDVKGTLRYMMSNRFPQSGNY 288 (431)
Q Consensus 214 ~~~~il~~~~~~~~~~~~~~~~~~w~~~--~~~G~aHG~aGI~~~L~~~---~~~~~~~~~i~~~l~~~~~~~~~~~gnw 288 (431)
+.+.++... ... .+.-.+.|... .+-+.+ +.+-.+..++++ ..++.+++.+++..+|+.+.....++..
T Consensus 120 l~~~l~~~~---wd~--~~gGGi~W~~~~~~~knai-sN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~l~d~~g~v 193 (349)
T 3k7x_A 120 VWQDLVDTG---WND--IMGGGFAWRRPQMYYKNTP-VNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKVLVREDGFV 193 (349)
T ss_dssp HHHHHHHHT---BCS--GGGSCBEEETTEEEEEEHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHBCTTSCB
T ss_pred HHHHHHHhC---CCC--CCCCceEecCCCccccchh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCeE
Confidence 555552211 111 11112335421 121111 444444555444 4789999999999999877444323444
Q ss_pred CCCCC---CCC-CcccccccCchHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH----cCCCCCCccccch--hhHHHH
Q 014060 289 PVSEG---NPR-DKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWK----NGLVKKVGLADGA--AGNAYA 358 (431)
Q Consensus 289 ~~~~~---~~~-~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~----~g~~~~~~LCHG~--aG~~~~ 358 (431)
-|... +.. .....|=++..=++.++..++++++ +++|++.+.+.++.+.+ .|++...+ |.|. +..+.+
T Consensus 194 ~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~-d~~yl~~a~~l~~~~~~~f~~~gi~~~~~-~~~D~~sFkgi~ 271 (349)
T 3k7x_A 194 EDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITK-EAIYLDTANKTAAISLKELTEDGIFKDEG-NGGDEGLFKGIF 271 (349)
T ss_dssp CCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHEETTEECCCC-SSSGGGGHHHHH
T ss_pred ecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHHhccCCcccCCC-CCccHHHHHHHH
Confidence 33221 111 1112454444446777888999999 99999999998876543 34333322 4344 444444
Q ss_pred ---HHHHHHHhCCchHHHHHHHHHHHHHHh
Q 014060 359 ---FLSLYRLTGETIYVERANAFSSFLYHN 385 (431)
Q Consensus 359 ---Ll~l~~~t~~~~~~~~a~~~~~~~~~~ 385 (431)
|..+++.++++.++...++.++.+...
T Consensus 272 ~r~L~~l~~~~p~~~~~~~l~~sa~aa~~~ 301 (349)
T 3k7x_A 272 YRYFTDLIEETANKTYRDFVLNSCQILVEN 301 (349)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCChHHHHHHHHHHHHHHHHh
Confidence 345666778877777777777666554
No 16
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=96.98 E-value=0.012 Score=57.02 Aligned_cols=175 Identities=14% Similarity=0.016 Sum_probs=101.2
Q ss_pred chHHHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCCCCcceeeccccCCCCcchHHHHHHHhc---CCCC
Q 014060 187 RAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWHGTRYWGAANGLAGILQVLLH---FPLS 263 (431)
Q Consensus 187 ~aG~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~~~~~~w~~~~~~G~aHG~aGI~~~L~~---~~~~ 263 (431)
.||.+-+|...++.++++++. +.+.+..+.+... . . .. |. .++-|=.+=.+.++++ +..+
T Consensus 48 ~a~~~~~l~d~~~~tgd~~y~-~~a~~~~~~~~~~--~---~-~~------~~----~~~~DD~a~~~la~~~aye~t~~ 110 (349)
T 3k7x_A 48 LAHLVEVRLDAYLRTKKQADL-EVAEKTYLHNKNR--N---G-GT------LI----HDFYDDMLWNALAAYRLYKATGK 110 (349)
T ss_dssp HHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHH--T---T-SS------SC----CSBHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHhc--C---C-CC------CC----ccCccHHHHHHHHHHHHHHHHCC
Confidence 466678888999999985432 3344444333221 1 0 00 10 1111111112234443 3478
Q ss_pred hHHHHHHHHHHHHH-HhccCC-CCCC--CCCCCCCCCCcccccccCchHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 014060 264 EEDAEDVKGTLRYM-MSNRFP-QSGN--YPVSEGNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWK 339 (431)
Q Consensus 264 ~~~~~~i~~~l~~~-~~~~~~-~~gn--w~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~ 339 (431)
+++++.++++.+++ .....+ ..|. |... ........ +....+..+++++++++ +++|.+.|+++.+.+.+
T Consensus 111 ~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~---~~~~knai--sN~~~~~~la~l~~~tg-d~~Yl~~A~~~~~w~~~ 184 (349)
T 3k7x_A 111 SIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP---QMYYKNTP--VNAPFIILSCWLYNELN-ETKYLEWAMKTYEWQTK 184 (349)
T ss_dssp HHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT---EEEEEEHH--HHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCCCCCCceEecCC---Cccccchh--hHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHh
Confidence 99999999999998 443332 1232 3110 00111222 33344555667788899 99999999999876644
Q ss_pred c-----CCCCC---------------CccccchhhHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhh
Q 014060 340 N-----GLVKK---------------VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNA 386 (431)
Q Consensus 340 ~-----g~~~~---------------~~LCHG~aG~~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~~ 386 (431)
. +...+ .+.+.|. .+..+..+|+.|+|++|+++|+++++.+++..
T Consensus 185 ~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~--~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~~f 249 (349)
T 3k7x_A 185 VLVREDGFVEDGINRLEDGTIDYEWKFTYNQGV--YIGANLELYRITKEAIYLDTANKTAAISLKEL 249 (349)
T ss_dssp HHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCeEecCCccCCCCccCCcCeeeHHHHH--HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 1 11100 1122222 56777889999999999999999999887754
No 17
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.60 E-value=0.37 Score=47.29 Aligned_cols=78 Identities=10% Similarity=-0.010 Sum_probs=54.3
Q ss_pred chHHHH----HHHHHHhhCCCCHHHHHHHHHHHHHHHHcCCCCC-------------------CccccchhhHHHHHHHH
Q 014060 306 ATGVAI----TLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK-------------------VGLADGAAGNAYAFLSL 362 (431)
Q Consensus 306 ~~Gi~~----~l~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~-------------------~~LCHG~aG~~~~Ll~l 362 (431)
.||-.+ .++.++++++ ++.+.+.|.++.+..++.|.-.. ...+|.- .+.+++.+
T Consensus 246 ~pGH~iE~awlLl~~~~~~~-~~~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~~~~~k~~W~qaE--al~a~l~l 322 (402)
T 3gt5_A 246 QPGHQTEWAKLLLILDRYIE-VEWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQAE--SLAAAALL 322 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHHHBCTTTCSBCSEECTTSCEEECCEEHHHHHH--HHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhcccCCCCcEEEEEcCCCCeeeCCcceeHHHH--HHHHHHHH
Confidence 456533 3566778899 99999999998877765443210 1123322 34457789
Q ss_pred HHHhCCchHHHHHHHHHHHHHHhh
Q 014060 363 YRLTGETIYVERANAFSSFLYHNA 386 (431)
Q Consensus 363 ~~~t~~~~~~~~a~~~~~~~~~~~ 386 (431)
|+.|+|++|++.++++.+++.+..
T Consensus 323 y~~tgd~~yl~~a~~~~~~~~~~~ 346 (402)
T 3gt5_A 323 ATRSGDERYWQWYDRLWAYAWQHM 346 (402)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhC
Confidence 999999999999999988876643
No 18
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=95.53 E-value=0.051 Score=53.52 Aligned_cols=123 Identities=21% Similarity=0.225 Sum_probs=79.1
Q ss_pred CChHHHHHHHHHHHHHHhccC-CCCCCCCCCCCCCCC-cccccccCchHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 014060 262 LSEEDAEDVKGTLRYMMSNRF-PQSGNYPVSEGNPRD-KLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWK 339 (431)
Q Consensus 262 ~~~~~~~~i~~~l~~~~~~~~-~~~gnw~~~~~~~~~-~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~ 339 (431)
.++++++.++++++|+.+... ++.|.|.....+... .....|+.-+=.++++.. +..++ ++++++.|.++.+.+.+
T Consensus 69 g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~~tg-d~~~l~~A~~l~~~i~~ 146 (402)
T 3gt5_A 69 GTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GLKVG-IKQAREWMDETWCLLER 146 (402)
T ss_dssp CCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHHTT-CTTHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HHHhC-ChhHHHHHHHHHHHHHH
Confidence 688999999999999987544 333666433311110 122455555555556666 44588 99999999998877743
Q ss_pred c------CCCC---CC--cc--ccchhh---HHHHHHHHHHHhCCchHHHHHHHHHHHHHHhh
Q 014060 340 N------GLVK---KV--GL--ADGAAG---NAYAFLSLYRLTGETIYVERANAFSSFLYHNA 386 (431)
Q Consensus 340 ~------g~~~---~~--~L--CHG~aG---~~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~~ 386 (431)
. |... .. .+ .-+... ...+++.+++.|++++|+++|+++++.+....
T Consensus 147 ~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~~~~~f 209 (402)
T 3gt5_A 147 HFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQ 209 (402)
T ss_dssp HTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTHH
T ss_pred HhcCCcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence 2 2110 01 01 112222 34568999999999999999999998877653
No 19
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=95.23 E-value=0.059 Score=52.54 Aligned_cols=125 Identities=10% Similarity=-0.024 Sum_probs=79.6
Q ss_pred CCChHHHHHHHHHHHHHHhccCCCCCCCCCCCC-C-CCCcccccccCchHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 014060 261 PLSEEDAEDVKGTLRYMMSNRFPQSGNYPVSEG-N-PRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLW 338 (431)
Q Consensus 261 ~~~~~~~~~i~~~l~~~~~~~~~~~gnw~~~~~-~-~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~a~~~~~~~~ 338 (431)
..++++++.++++++|+.+.....+|.|-...+ + +......-|.+-.=.+.++..++++++ ++++++.|.++.+.+.
T Consensus 70 ~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg-~~~~l~~A~~~~~~i~ 148 (388)
T 2gz6_A 70 EKRENWLKIARNGAKFLAQHGRDDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYALASG-EEWAKDVAMQAYNNVL 148 (388)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHH
Confidence 367899999999999998864432566654331 1 100001223333335556667788999 9999999999987764
Q ss_pred Hc-----CCC----CCCccccchhhH---HHHHHHHHHHhCCchHHHHHHHHHHHHHHhh
Q 014060 339 KN-----GLV----KKVGLADGAAGN---AYAFLSLYRLTGETIYVERANAFSSFLYHNA 386 (431)
Q Consensus 339 ~~-----g~~----~~~~LCHG~aG~---~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~~ 386 (431)
+. |+. ......-|..++ ..+++.+++.|++++|+++|.++++.+....
T Consensus 149 ~~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~~ 208 (388)
T 2gz6_A 149 RRKDNPKGKYTKTYPGTRPMKALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGDF 208 (388)
T ss_dssp TC--------------CCCCEETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHhcCCCcccCcccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 32 221 001112233333 3456889999999999999999999887754
No 20
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.75 E-value=0.34 Score=48.17 Aligned_cols=222 Identities=7% Similarity=-0.040 Sum_probs=121.6
Q ss_pred hHHHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcch---hccccCCCCCCcceeeccccCCCCcchHHHHHHHhcC---C
Q 014060 188 AGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGR---AGATANTACPLMYRWHGTRYWGAANGLAGILQVLLHF---P 261 (431)
Q Consensus 188 aG~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~---~~~~~~~~~~~~~~w~~~~~~G~aHG~aGI~~~L~~~---~ 261 (431)
+-.+.++..+++.+++++++ +++++-++.|.+... .+.+.. ......+.+....|+-+=..-++++|+.+ .
T Consensus 85 Gv~l~gl~~ay~~Tgd~kY~-~ya~~~~dfi~~~~p~~~~~~~~~--G~l~~~~r~~~~~~~LDD~g~~~~~Li~lY~~T 161 (445)
T 3k11_A 85 GVTYSALIAAAETTGDKRYT-DYVQNRFRFLAEVAPHFKRVYEEK--GKTDSQLLQILTPHALDDAGAVCTAMIKLRLKD 161 (445)
T ss_dssp HHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHH--SCCCHHHHHHHSCCSGGGTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHhccchhhhhhhcc--CCeecccccccCCCcchhHHHHHHHHHHHHHhc
Confidence 34466889999999996553 355555555443211 000000 00111111111233333344455666654 4
Q ss_pred CChHHHHHHHHHHHHHHhccC--CCCCCCCCCCCCCCCcccccccCchHHHHHHHHHHhhCCCCHH--HHHHHHHHHHHH
Q 014060 262 LSEEDAEDVKGTLRYMMSNRF--PQSGNYPVSEGNPRDKLVQWSHGATGVAITLCKASQVFPSDRE--FRDAAIEAGEVL 337 (431)
Q Consensus 262 ~~~~~~~~i~~~l~~~~~~~~--~~~gnw~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~--~~~~a~~~~~~~ 337 (431)
.++++++.+.+..+++...+- ++.+.|-. .. ...-.||=|..=....+..+++.++ +++ +.+.|.+-....
T Consensus 162 ~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~-~~---~~~q~WiD~lyM~~pfla~~~~~tg-d~~~~y~d~A~~q~~~~ 236 (445)
T 3k11_A 162 ESLPVDGLIQNYFDFIINKEYRLADGTFARN-RP---QRNTLWLDDMFMGIPAVAQMSRYDK-EAKNKYLAEAVKQFLQF 236 (445)
T ss_dssp TTCCCHHHHHHHHHHHHHTSCBCTTCCBCBC-SS---STTEEETHHHHHHHHHHHHHHHHCG-GGHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCceeec-CC---CCCceEecchhhHHHHHHHHHHHHC-CcchHHHHHHHHHHHHH
Confidence 678899999999999988653 23334531 11 1124699887667777888999999 998 888877654433
Q ss_pred HH------cCCC-------C----CCccccchhhHHHHHHHHHHHh-----CCchHHHHHHHHHHHHHHhhhhhhccCCC
Q 014060 338 WK------NGLV-------K----KVGLADGAAGNAYAFLSLYRLT-----GETIYVERANAFSSFLYHNAQNLVTSGHT 395 (431)
Q Consensus 338 ~~------~g~~-------~----~~~LCHG~aG~~~~Ll~l~~~t-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 395 (431)
.+ .|+. + ...+.=|.+=.++++.++++.. +.+.+++..+++++.+++...+ .|-.
T Consensus 237 ~~~l~D~~tGL~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~---~G~W 313 (445)
T 3k11_A 237 ADRMFIPEKGLYRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSG---EGFW 313 (445)
T ss_dssp HHHHEETTTTEECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCT---TSCE
T ss_pred HHhcccCCCCCEeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCC---CCch
Confidence 22 2221 0 0234444444555566666654 3456777777777777664322 1211
Q ss_pred C-CCCC--CcccccchHHHHHHHHHccC
Q 014060 396 R-GADH--GYSLFQGLAGTACIWFDLLE 420 (431)
Q Consensus 396 ~-~~~~--~~gl~~G~aGI~~~Ll~l~~ 420 (431)
. ..+. ++-=-.|.|.++|+|++...
T Consensus 314 ~~vld~~~~y~EsSaTAmfaygllkgvr 341 (445)
T 3k11_A 314 HQLLDCNDSYLETSATAIYVYCLAHAIN 341 (445)
T ss_dssp ESBTTCTTSCEEHHHHHHHHHHHHHHHH
T ss_pred hhccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 1 1111 22223477788888887643
No 21
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=93.01 E-value=0.25 Score=48.30 Aligned_cols=74 Identities=20% Similarity=0.258 Sum_probs=56.5
Q ss_pred HHHHHHhhCCCCHHHHHHHHHHHHHH-HHcCCCCC-Ccccc-----ch--------h-------hHHHHHHHHHHHhCCc
Q 014060 312 TLCKASQVFPSDREFRDAAIEAGEVL-WKNGLVKK-VGLAD-----GA--------A-------GNAYAFLSLYRLTGET 369 (431)
Q Consensus 312 ~l~~~~~~~~~~~~~~~~a~~~~~~~-~~~g~~~~-~~LCH-----G~--------a-------G~~~~Ll~l~~~t~~~ 369 (431)
.++.++++++ ++++++.|.++++.+ ++.+...+ .+++| |. + =.+.+++.+|+.|+++
T Consensus 255 lL~~a~~~~~-~~~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~ 333 (402)
T 1fp3_A 255 FLLRHSSRSG-DAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDP 333 (402)
T ss_dssp HHHHHHHHTT-CHHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHcC-ChHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCH
Confidence 4778889999 999999999998888 77654322 33443 22 1 1167788999999999
Q ss_pred hHHHHHHHHHHHHHHhh
Q 014060 370 IYVERANAFSSFLYHNA 386 (431)
Q Consensus 370 ~~~~~a~~~~~~~~~~~ 386 (431)
+|++.|+++.+++.+..
T Consensus 334 ~yl~~a~~~~~~~~~~f 350 (402)
T 1fp3_A 334 ALLRLFYQVAEYTFRQF 350 (402)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999999887754
No 22
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=91.55 E-value=1.6 Score=42.93 Aligned_cols=127 Identities=9% Similarity=0.049 Sum_probs=73.7
Q ss_pred cCCCChHHHHHHHHHHHHHHhccCC-CCCCCCCCCCCCCCccccc----ccC-------chHHH----HHHHHHHhhC--
Q 014060 259 HFPLSEEDAEDVKGTLRYMMSNRFP-QSGNYPVSEGNPRDKLVQW----SHG-------ATGVA----ITLCKASQVF-- 320 (431)
Q Consensus 259 ~~~~~~~~~~~i~~~l~~~~~~~~~-~~gnw~~~~~~~~~~~~~W----ChG-------~~Gi~----~~l~~~~~~~-- 320 (431)
++..++++++.++++++........ ..+..+............. +.+ .||.. ..++.+++++
T Consensus 186 ~~tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~ 265 (421)
T 2zbl_A 186 DVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEA 265 (421)
T ss_dssp HTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCHHHHHHHHHHHHHHHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHccc
Confidence 3446888999999999887653321 1121111000000000111 111 36653 3456677777
Q ss_pred -CCC--H-HHHHHHHHHHHHHHHcCCCCC--Cccc-----cc-----------hhhHHHHHHHHHHHhCCchHHHHHHHH
Q 014060 321 -PSD--R-EFRDAAIEAGEVLWKNGLVKK--VGLA-----DG-----------AAGNAYAFLSLYRLTGETIYVERANAF 378 (431)
Q Consensus 321 -~~~--~-~~~~~a~~~~~~~~~~g~~~~--~~LC-----HG-----------~aG~~~~Ll~l~~~t~~~~~~~~a~~~ 378 (431)
+ + + .+++.|.+..+.+++.+.... .|++ .| .+=.+.+++.+|+.|++++|++.|+++
T Consensus 266 ~~-~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~ 344 (421)
T 2zbl_A 266 RF-ETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKW 344 (421)
T ss_dssp TT-CCCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred cc-ccchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4 4 5 899999998877755443211 1221 12 223366788999999999999999999
Q ss_pred HHHHHHhh
Q 014060 379 SSFLYHNA 386 (431)
Q Consensus 379 ~~~~~~~~ 386 (431)
.+++....
T Consensus 345 ~~~~~~~~ 352 (421)
T 2zbl_A 345 WDYCIKYL 352 (421)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 88876654
No 23
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=91.03 E-value=0.53 Score=46.44 Aligned_cols=121 Identities=16% Similarity=0.133 Sum_probs=77.1
Q ss_pred CChHHHHHHHHHHHHHHhccCC-CCCCCCCCCCCCC--CcccccccCchHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 014060 262 LSEEDAEDVKGTLRYMMSNRFP-QSGNYPVSEGNPR--DKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLW 338 (431)
Q Consensus 262 ~~~~~~~~i~~~l~~~~~~~~~-~~gnw~~~~~~~~--~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~a~~~~~~~~ 338 (431)
.++++++.++++++++.+.... ..|.|-.+.+... .. ...++.-+=++.++.. +++++ ++.+.+.+.++.+.+.
T Consensus 67 g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~dg~~~~-~k~lyd~Af~i~al~~-~~~tg-~~~~l~~a~~~~~~l~ 143 (421)
T 2zbl_A 67 GRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDA-SKQGYQHFFALLGAAS-AVTTG-HPEARKLLDYTIEVIE 143 (421)
T ss_dssp TCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETTEEEEC-CEEHHHHHHHHHHHHH-HHTTT-CTTHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCCCCCcCC-chhHHHHHHHHHHHHH-HHHhC-CccHHHHHHHHHHHHH
Confidence 5788999999999999876443 2366643321110 01 1334433444445666 78889 9999999888877664
Q ss_pred H------cCC-C----CCCccc---cchhh---HHHHHHHHHHHhCCchHHHHHHHHHHHHHHh
Q 014060 339 K------NGL-V----KKVGLA---DGAAG---NAYAFLSLYRLTGETIYVERANAFSSFLYHN 385 (431)
Q Consensus 339 ~------~g~-~----~~~~LC---HG~aG---~~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~ 385 (431)
+ .|. . ...... -+..+ .+.+|+.+++.|++++|+++|.++++.+...
T Consensus 144 ~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~~ 207 (421)
T 2zbl_A 144 KYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHD 207 (421)
T ss_dssp HHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCC
T ss_pred HHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 3 121 0 000000 12333 3788899999999999999999999887653
No 24
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=82.59 E-value=7.7 Score=39.72 Aligned_cols=118 Identities=17% Similarity=0.181 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHHHHhccCCCCC-------CCCCC---C-------CCC---CCcccccccCchHHHHHHHHHHhh----
Q 014060 264 EEDAEDVKGTLRYMMSNRFPQSG-------NYPVS---E-------GNP---RDKLVQWSHGATGVAITLCKASQV---- 319 (431)
Q Consensus 264 ~~~~~~i~~~l~~~~~~~~~~~g-------nw~~~---~-------~~~---~~~~~~WChG~~Gi~~~l~~~~~~---- 319 (431)
+++++.++=.++|+++.+.+... .|+.. | +.. ........-|+.=.+-++..++++
T Consensus 190 ~~lldE~rWg~D~llkm~~~~g~~y~qVgd~W~~d~~~R~~~~~~~~~~~~~~~y~~~~~~~agl~aAALA~Asrvf~d~ 269 (586)
T 3h7l_A 190 TRLIEEALFGADFLVRMQNEKGFFYMTVFDKWSKDTAQREICAYETQLGHKFDDYQAGFRQGGGVAIAALAAASRLGVHG 269 (586)
T ss_dssp HHHHHHHHHHHHHHHHTBCTTSCBBCEEECTTCCCGGGCEEEEEETTTTEEESCCBCCGGGTHHHHHHHHHHHTTSSSCS
T ss_pred HHHHHHHHHHHHHHHhcccCCCeEEEEecCCCCCCCCccccccccCCCCCCCcceecCCCCcHHHHHHHHHHHhcccCCC
Confidence 35567778888999887664221 25321 0 000 001112222332234445666777
Q ss_pred -CCCCHHHHHHHHHHHHHHHHc-CCCCCCccccchhhH------HHHHHHHHHHhCCchHHHHHHHHHHHHHHhh
Q 014060 320 -FPSDREFRDAAIEAGEVLWKN-GLVKKVGLADGAAGN------AYAFLSLYRLTGETIYVERANAFSSFLYHNA 386 (431)
Q Consensus 320 -~~~~~~~~~~a~~~~~~~~~~-g~~~~~~LCHG~aG~------~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~~ 386 (431)
++ .+++++.|+++.+.+.+. +... ..|..|. ..+.+.||+.|+++.|++.|...++.+....
T Consensus 270 ~~~-a~~~L~aA~~a~~fa~~~~~~y~----~~g~~~~~De~~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~ 339 (586)
T 3h7l_A 270 EYD-QQKYRNAAENGYWHLKEHNTQYL----NDGEENIIDEYCALLASVELFKATKETRYLEESRLWAQRLVARQ 339 (586)
T ss_dssp SSC-HHHHHHHHHHHHHHHHHHHHHHS----TTSCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTE
T ss_pred CcC-hHHHHHHHHHHHHHHHhcCcccc----CCCCccchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 33 457777777776555332 1011 1244565 4566779999999999999999888877653
No 25
>3e7j_A Heparinase II protein; alpha and beta lyase, alpha6/alpha6 incomplete toroid, sugar protein, lyase; HET: NAG GCU GCD; 2.10A {Pedobacter heparinus} PDB: 3e80_A* 2fut_A* 2fuq_A*
Probab=80.81 E-value=7.1 Score=41.38 Aligned_cols=212 Identities=13% Similarity=0.000 Sum_probs=98.8
Q ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHhccCCCCCCCCCCCCcccccccchHHHHHHHHHhhhhCCCCCchhhHHHHHHH
Q 014060 138 IGAVVANRMGDRSRRDFFLNLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDA 217 (431)
Q Consensus 138 l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~i~~Ll~l~~~~~~~~~~~~~i~~~~~~ 217 (431)
.+.+.+..++|+++++++.+.+..++.. .. |....|+..+.+=++.++...|....+ .+..+.-+++.+.
T Consensus 87 ~LalAylLtgD~ryad~a~~~L~~~~~~--~~-------W~~~~Dl~~~~a~~~~~lA~aYD~Lyd-~Ls~eeR~~Ir~~ 156 (749)
T 3e7j_A 87 LMALNYLMTKDPKVGREAITSIIDTLET--AT-------FKPAGDISRGIGLFMVTGAIVYDWCYD-QLKPEEKTRFVKA 156 (749)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHH--CC-------CCCCTTTHHHHHHHHHHHHHHHHHTGG-GCCHHHHHHHHHH
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHhhc--cc-------CCCcccchHHHHHHHHHHHHHHHHHhh-hCCHHHHHHHHHH
Confidence 3344567789999999999888887642 11 222344432223334444444544433 2223344444445
Q ss_pred HHHcchhccccCCCCCCcceee-cccc-CCCCcchHHHH-HHHhcCCCChHHHHHHH-HHHHHHH--hccCCCCCCCCCC
Q 014060 218 VLAGGRAGATANTACPLMYRWH-GTRY-WGAANGLAGIL-QVLLHFPLSEEDAEDVK-GTLRYMM--SNRFPQSGNYPVS 291 (431)
Q Consensus 218 il~~~~~~~~~~~~~~~~~~w~-~~~~-~G~aHG~aGI~-~~L~~~~~~~~~~~~i~-~~l~~~~--~~~~~~~gnw~~~ 291 (431)
|.+.+........ +....|. ...+ .-.|+| ++ .+|+.+..+++..+.+. .+++... ..+...+|.|+
T Consensus 157 I~~~~~~p~~~w~--~~~~~~~~~~~NWn~vc~G---ll~aALAL~~d~pe~~~~~~~~~~~~~~~l~~~~~~DG~~~-- 229 (749)
T 3e7j_A 157 FVRLAKMLECGYP--PVKDKSIVGAASEWMIMRD---LLSVGIAIYDEFPEMYNLAAGRFFKEHLVARNWFYPSHNYH-- 229 (749)
T ss_dssp HHHHHTTSTTCSS--SCSSCSSSSGGGTHHHHTH---HHHHHHHTTTTCTHHHHHHHHHHHHTHHHHHHHHGGGCCCS--
T ss_pred HHHHHHHHHHhcc--ccccccccCCChHHHHHHH---HHHHHHHHcCCcHHHHHHHHHHHHHhhhhhhcccCCCCCcc--
Confidence 5554433221110 1001121 1111 224664 43 23433334444433222 2222111 11212378884
Q ss_pred CCCCCCcccccccCchHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHcCCCCCCccccchh--------hHHHHHHHHH
Q 014060 292 EGNPRDKLVQWSHGATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKKVGLADGAA--------GNAYAFLSLY 363 (431)
Q Consensus 292 ~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~~LCHG~a--------G~~~~Ll~l~ 363 (431)
.....|-+|..-.+..+..+.+.++ .+-+....+++.+.+...-......+..|++ +...++..++
T Consensus 230 -----EG~~Yw~yg~~~l~~~~~aL~~~tg-~d~~~p~l~k~a~y~l~~~~p~g~~~nfgDs~~~~~~p~~~~~al~~~a 303 (749)
T 3e7j_A 230 -----QGMSALNVRFTNDLFALWILDRMGA-GNVFNPGQQFILYDAIYKRRPDGQILAGGDVDYSRKKPKYYTMPALLAG 303 (749)
T ss_dssp -----SHHHHHHHHHHHHHHHHHHHHHHTT-CCCSCGGGGGTTHHHHHTBCTTSCBCCCSSCCCCSSSCCCCHHHHHHHH
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHhhhc-chhhHHHHHHHHHHHHHeeCCCCceeecCCCCcccCccccchHHHHHHH
Confidence 1236799999888888877777776 3222223334444443321111122222222 1234455668
Q ss_pred HHhCCchHH
Q 014060 364 RLTGETIYV 372 (431)
Q Consensus 364 ~~t~~~~~~ 372 (431)
+.++|+.+.
T Consensus 304 ~~~~dp~l~ 312 (749)
T 3e7j_A 304 SYYKDEYLN 312 (749)
T ss_dssp HHHTCHHHH
T ss_pred HhhCCHHHH
Confidence 888998655
No 26
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=80.61 E-value=5.4 Score=37.61 Aligned_cols=131 Identities=11% Similarity=0.159 Sum_probs=82.9
Q ss_pred chHHHHHHHhcCC---CChHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCC--CcccccccCchHHHHHHHHHHhh----
Q 014060 249 GLAGILQVLLHFP---LSEEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPR--DKLVQWSHGATGVAITLCKASQV---- 319 (431)
Q Consensus 249 G~aGI~~~L~~~~---~~~~~~~~i~~~l~~~~~~~~~~~gnw~~~~~~~~--~~~~~WChG~~Gi~~~l~~~~~~---- 319 (431)
.++-.+.+|.+++ .++++.+.+.++++|++..|.+ +|.||....+.. .....+|=...+-++-++.....
T Consensus 75 dTa~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~~-nGGWpqFdpd~~~Yl~~IpFnDDvtarvLelL~~~~~~~~~ 153 (332)
T 1gxm_A 75 ATITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYS-TGALPQFYPLKGGYSDHATFNDNGMAYALTVLDFAANKRAP 153 (332)
T ss_dssp TTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCT-TSCCBSEESCCSGGGGSEECGGGHHHHHHHHHHHHHTTCTT
T ss_pred cHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccCC-CCCccccCCCcccccccCCcchHHHHHHHHHHHHHHhccCC
Confidence 4666778887754 4678899999999999998887 899987654322 12356777777777766654321
Q ss_pred -----CCCC---HHHHHHHHHHHHHHHHcCCC----------------------CC---Cccccchh-hHHHHHHHHHHH
Q 014060 320 -----FPSD---REFRDAAIEAGEVLWKNGLV----------------------KK---VGLADGAA-GNAYAFLSLYRL 365 (431)
Q Consensus 320 -----~~~~---~~~~~~a~~~~~~~~~~g~~----------------------~~---~~LCHG~a-G~~~~Ll~l~~~ 365 (431)
+. + ++....+.++++++.+.-.. +. ++||-..+ |+..+|+.+..
T Consensus 154 ~~~~~~~-~~~~~~~~~av~Rgid~Llk~Qe~dggw~g~Wg~qydygT~~Pa~ARayE~psL~~~es~giv~~LM~~~~- 231 (332)
T 1gxm_A 154 FDTDVFS-DNDRTRFKTAVTKGTDYILKAQWKQNGVLTVWCAQHGALDYQPKKARAYELESLSGSESVGVLAFLMTQPQ- 231 (332)
T ss_dssp SCSTTSC-HHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCCBCCCSTTCCSSEETTTHHHHHHHHTTSCC-
T ss_pred ccccccc-cchhhhhHHHHHHHHHHHHHhhCccCCCcCeeccccccccccccccccccccchhHHHHHHHHHHhccCCC-
Confidence 32 2 45556677778888654211 01 36665443 45554444332
Q ss_pred hCCchHHHHHHHHHHHHHH
Q 014060 366 TGETIYVERANAFSSFLYH 384 (431)
Q Consensus 366 t~~~~~~~~a~~~~~~~~~ 384 (431)
+++.++..++.++++.+
T Consensus 232 --~~~v~~aI~~Av~WL~~ 248 (332)
T 1gxm_A 232 --TAEIEQAVRAGVAWFNS 248 (332)
T ss_dssp --CHHHHHHHHHHHHHHTC
T ss_pred --CHHHHHHHHHHHHHHHh
Confidence 57777777777777644
No 27
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=79.14 E-value=11 Score=37.90 Aligned_cols=75 Identities=15% Similarity=0.039 Sum_probs=48.1
Q ss_pred ChHHHHHHHHHHHHHHHHhhcc-CCCCCCCC--CC-CC--------CCCccccccHHHHHHHHHHHhhhCCHHHHHHHHH
Q 014060 43 PCETFLKAAVSLKDQVVEVTWR-RGSGGGGE--PG-RG--------MDPTLYTGLLGTAFICLRSYELTGNQQELLLSAE 110 (431)
Q Consensus 43 ~~~~~l~~A~~i~~~l~~~~w~-~~~~~~~~--~~-~~--------~~~~LY~G~~Gial~l~~L~~~t~~~~~~~~a~~ 110 (431)
.++.+|+.|+++||.|+... . .+.+.-.. +. .+ ...+.-.+.+.+.+-|.+|.++|||++|.+.|.+
T Consensus 122 ~d~~lL~kA~dLadrLlpAF-d~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r 200 (511)
T 1dl2_A 122 NKTVYLNKAIDLGDRLALAF-LSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVER 200 (511)
T ss_dssp CHHHHHHHHHHHHHHHHGGG-GSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHhh-cCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHH
Confidence 56899999999999999763 4 33311000 00 00 0011222333445778999999999999999988
Q ss_pred HHHHHHHH
Q 014060 111 IIDTCASV 118 (431)
Q Consensus 111 ~l~~~~~~ 118 (431)
+.+.+.+.
T Consensus 201 ~~~~l~~~ 208 (511)
T 1dl2_A 201 VYEPLYKN 208 (511)
T ss_dssp THHHHHHH
T ss_pred HHHHHHhc
Confidence 88766553
No 28
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=78.80 E-value=11 Score=36.24 Aligned_cols=116 Identities=18% Similarity=0.209 Sum_probs=69.2
Q ss_pred HHHHHHHHH-hccCCCCCCCCCCCC-CCCC-cccccccCchHHHHHHHHHHhhC---CCCHHHHHHHHHHHHHHHHcCCC
Q 014060 270 VKGTLRYMM-SNRFPQSGNYPVSEG-NPRD-KLVQWSHGATGVAITLCKASQVF---PSDREFRDAAIEAGEVLWKNGLV 343 (431)
Q Consensus 270 i~~~l~~~~-~~~~~~~gnw~~~~~-~~~~-~~~~WChG~~Gi~~~l~~~~~~~---~~~~~~~~~a~~~~~~~~~~g~~ 343 (431)
+.+++.+.. ..+++..|.+..... +... ....-+.=..=++.++..+++++ + ++++.+.|.++++.+.+....
T Consensus 19 ~~~~l~~w~~~~~D~~~GGf~~~~~~dg~~~~~~k~l~~nar~l~~~a~a~~~~~~~~-~~~~l~~A~~~~~fl~~~~~d 97 (402)
T 1fp3_A 19 LDRVMAFWLEHSHDREHGGFFTCLGRDGRVYDDLKYVWLQGRQVWMYCRLYRKLERFH-RPELLDAAKAGGEFLLRHARV 97 (402)
T ss_dssp HHHHHHHHHHHSBCTTTSSBCCCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHCGGGC-CHHHHHHHHHHHHHHHHHTBS
T ss_pred HHHHHHHhhccCCCCCCCCEeeEECCCCCCCCCccchhhhHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHhccC
Confidence 467777776 455555566533221 1110 00000110111233445567777 8 999999999999888654311
Q ss_pred CCC--ccc----------------cchhhHHHHHHHHHHHhCCchHHHHHHHHHHHHHHhh
Q 014060 344 KKV--GLA----------------DGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNA 386 (431)
Q Consensus 344 ~~~--~LC----------------HG~aG~~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~~ 386 (431)
... ++. -+.+=.+.+++.+|+.|+++.+++.|.++.+.+.+..
T Consensus 98 ~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~ 158 (402)
T 1fp3_A 98 APPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWV 158 (402)
T ss_dssp STTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 111 222 2244567788889999999999999999999887754
No 29
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=78.47 E-value=23 Score=34.42 Aligned_cols=133 Identities=11% Similarity=0.115 Sum_probs=80.4
Q ss_pred chHHHHHHHhcC----C--CChHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCC--cccccccCchHHHHHHHH-HHhh
Q 014060 249 GLAGILQVLLHF----P--LSEEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPRD--KLVQWSHGATGVAITLCK-ASQV 319 (431)
Q Consensus 249 G~aGI~~~L~~~----~--~~~~~~~~i~~~l~~~~~~~~~~~gnw~~~~~~~~~--~~~~WChG~~Gi~~~l~~-~~~~ 319 (431)
.++-.+.+|.++ . .++.+.+.+.++++|++..|.+ +|.||....+... ....+|=...+-++.++. +..-
T Consensus 150 dTa~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~-nGGWpqFdpdn~~y~~~IpFnDDvt~rvle~L~~~~~~ 228 (408)
T 1r76_A 150 ATVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFP-NGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAG 228 (408)
T ss_dssp TTHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCT-TSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccCC-CCCCcCcCccccccccCCCcCcHHHHHHHHHHHHHHhc
Confidence 356666777764 2 4577899999999999998887 8999876643221 235567777777766543 3331
Q ss_pred -----CCCC----HHHHHHHHHHHHHHHHcCCC-C---------------------C---Cccccch-hhHHHHHHHHHH
Q 014060 320 -----FPSD----REFRDAAIEAGEVLWKNGLV-K---------------------K---VGLADGA-AGNAYAFLSLYR 364 (431)
Q Consensus 320 -----~~~~----~~~~~~a~~~~~~~~~~g~~-~---------------------~---~~LCHG~-aG~~~~Ll~l~~ 364 (431)
+- + ......+.++++++.+.-.. . + ++||-.. +|+..+|+ ..
T Consensus 229 ~~~~~~~-~~~~~~~~~~av~Rgi~~Ll~~Qe~~dGsw~rWg~qY~ygT~~Pa~aRsYE~psLs~~esa~il~~LM--~~ 305 (408)
T 1r76_A 229 RDGFGFV-PPAIRTRALEATNAAIHCIVETQVVQDGKRLGWGQQHDALTLRPTSARNFEPAALSSTESARILLFLM--EI 305 (408)
T ss_dssp CTTCTTS-CHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCSBCCCSTTCCSCEEHHHHHHHHHHHT--TS
T ss_pred cCccccc-chhhhhhHHHHHHHHHHHHHHhhcccCCcccchhcccccccCcchhhhccCCccccHHHHHHHHHHHc--cC
Confidence 11 2 25556677777888654321 0 0 1443222 22333333 32
Q ss_pred HhCCchHHHHHHHHHHHHHHh
Q 014060 365 LTGETIYVERANAFSSFLYHN 385 (431)
Q Consensus 365 ~t~~~~~~~~a~~~~~~~~~~ 385 (431)
..+++++++...+.++++.+.
T Consensus 306 ~~~~~~~~~aI~~Av~WL~s~ 326 (408)
T 1r76_A 306 EAPSDAVKQAIRGGVAWLNTS 326 (408)
T ss_dssp SSCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHHHh
Confidence 346778888888888887663
No 30
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=75.28 E-value=9.8 Score=38.22 Aligned_cols=73 Identities=18% Similarity=0.133 Sum_probs=47.7
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCCCC--------CCCCCCCCccccccHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Q 014060 44 CETFLKAAVSLKDQVVEVTWRRGSGGGG--------EPGRGMDPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTC 115 (431)
Q Consensus 44 ~~~~l~~A~~i~~~l~~~~w~~~~~~~~--------~~~~~~~~~LY~G~~Gial~l~~L~~~t~~~~~~~~a~~~l~~~ 115 (431)
.+.+|+.|+++||.|+.. |..+.+.-. ....+...+.-.+.+.+.+-|.+|.++|||++|.+.|.++.+.+
T Consensus 130 ~~~lL~kA~dLadrLlpA-FdTptgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l 208 (503)
T 1hcu_A 130 VNSLLRQAQTLANGLKVA-FTTPSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYL 208 (503)
T ss_dssp HHHHHHHHHHHHHHHGGG-GCSSSSCCCSEEECSSSCEECCCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHh-hcCCCCCCcceeecccCCCCCCCCccccccccceeeehHHHHHHhCChHHHHHHHHHHHHH
Confidence 368999999999999975 333321000 00000111122334445677999999999999999999888877
Q ss_pred HH
Q 014060 116 AS 117 (431)
Q Consensus 116 ~~ 117 (431)
.+
T Consensus 209 ~~ 210 (503)
T 1hcu_A 209 LN 210 (503)
T ss_dssp HS
T ss_pred Hh
Confidence 65
No 31
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=74.47 E-value=14 Score=36.82 Aligned_cols=73 Identities=16% Similarity=0.048 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCCCCC--CC---C--CCCCccccccHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHH
Q 014060 44 CETFLKAAVSLKDQVVEVTWRRGSGGGGE--PG---R--GMDPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTCA 116 (431)
Q Consensus 44 ~~~~l~~A~~i~~~l~~~~w~~~~~~~~~--~~---~--~~~~~LY~G~~Gial~l~~L~~~t~~~~~~~~a~~~l~~~~ 116 (431)
.+.+|+.|+++||.|+.. |..+.+.-.. +. . +...+.-.+.+.+.+-|.+|.++|||++|.+.+.++.+.+.
T Consensus 117 ~~~lL~kA~dLadrLlpA-F~TptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~ 195 (475)
T 2ri9_A 117 IDGLLDQSRNLADVLKFA-FDTPSGVPYNNINITSHGNDGATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAESYLL 195 (475)
T ss_dssp HHHHHHHHHHHHHHHGGG-GCSSSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHHHHHHHHHHSCTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHh-hcCCCCCCCceeecccCCCcCCCccchhccccceeeHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 468999999999999975 3333210000 00 0 01111222334445778999999999999999998888776
Q ss_pred H
Q 014060 117 S 117 (431)
Q Consensus 117 ~ 117 (431)
+
T Consensus 196 ~ 196 (475)
T 2ri9_A 196 K 196 (475)
T ss_dssp S
T ss_pred h
Confidence 5
No 32
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=74.47 E-value=11 Score=38.21 Aligned_cols=73 Identities=12% Similarity=0.105 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCCC--------CCC-CCC-CCCccccccHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Q 014060 44 CETFLKAAVSLKDQVVEVTWRRGSGGG--------GEP-GRG-MDPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIID 113 (431)
Q Consensus 44 ~~~~l~~A~~i~~~l~~~~w~~~~~~~--------~~~-~~~-~~~~LY~G~~Gial~l~~L~~~t~~~~~~~~a~~~l~ 113 (431)
++.+|+.|.++||.|+.. |..+.+.- +.. ... .+.+.-.+.+.+.+-|.+|.++|||++|.+.+.++.+
T Consensus 187 d~~lL~kA~dLadrLlpA-FdTptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTGd~~Y~~~a~r~~~ 265 (538)
T 1x9d_A 187 DSLFLRKAEDFGNRLMPA-FRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQ 265 (538)
T ss_dssp CHHHHHHHHHHHHHHGGG-GCSTTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHCCTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh-hcCCCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhCCcHHHHHHHHHHH
Confidence 457999999999999965 33332100 000 000 0112223334455778999999999999999988888
Q ss_pred HHHH
Q 014060 114 TCAS 117 (431)
Q Consensus 114 ~~~~ 117 (431)
.+.+
T Consensus 266 ~l~~ 269 (538)
T 1x9d_A 266 HIHG 269 (538)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 7665
No 33
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=73.23 E-value=13 Score=37.01 Aligned_cols=73 Identities=15% Similarity=0.048 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCCCCC--CC-------CCC---CCccccccHHHHHHHHHHHhhhCCHHHHHHHHHH
Q 014060 44 CETFLKAAVSLKDQVVEVTWRRGSGGGGE--PG-------RGM---DPTLYTGLLGTAFICLRSYELTGNQQELLLSAEI 111 (431)
Q Consensus 44 ~~~~l~~A~~i~~~l~~~~w~~~~~~~~~--~~-------~~~---~~~LY~G~~Gial~l~~L~~~t~~~~~~~~a~~~ 111 (431)
++.+|+.|+++||.|+.. |..+.+.-.. +. .+. +.+.-.+.+.+.+-|.+|.++|||++|.+.+.++
T Consensus 123 d~~lL~kA~dLad~LlpA-FdTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~ 201 (478)
T 1nxc_A 123 EEIFRKKAVELGVKLLPA-FHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKI 201 (478)
T ss_dssp CHHHHHHHHHHHHHHGGG-GCSSSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHCCTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh-hcCCCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHHHCChHHHHHHHHH
Confidence 457899999999999975 3333210000 00 000 0112233334457789999999999999998877
Q ss_pred HHHHHH
Q 014060 112 IDTCAS 117 (431)
Q Consensus 112 l~~~~~ 117 (431)
.+.+.+
T Consensus 202 ~~~l~~ 207 (478)
T 1nxc_A 202 RTVLNK 207 (478)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 665543
No 34
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=68.76 E-value=18 Score=35.48 Aligned_cols=74 Identities=15% Similarity=0.102 Sum_probs=53.5
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHcC-CCC--------C-CccccchhhHHHHHHHHHHHhCCchHHHHHHHH
Q 014060 309 VAITLCKASQVFPSDREFRDAAIEAGEVLWKNG-LVK--------K-VGLADGAAGNAYAFLSLYRLTGETIYVERANAF 378 (431)
Q Consensus 309 i~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~g-~~~--------~-~~LCHG~aG~~~~Ll~l~~~t~~~~~~~~a~~~ 378 (431)
.++.+.+++.+.+ |+++.+.+..++... ..| +.. + .+=|+ ..=.+++++.+|+.|+++.|++.|.++
T Consensus 378 yll~~vra~~~s~-D~~Lw~~~~~ma~~~-~lgdi~~~~~~~~~~~~~~~~~-sp~lL~allEL~~atq~~~~l~lA~~~ 454 (543)
T 2v8i_A 378 FLISYARAYAIDN-DPLLWKVARGIANDQ-GLGDIGTAPGKEVKVNMDTTNS-DPYALFALLDLYHASQVADYRKLAEKI 454 (543)
T ss_dssp HHHHHHHHHHHSC-CHHHHHHHHHHHHHT-TCEECTTBTTBSCEECTTCCCC-CHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred hhHHHHHHHHcCC-CHHHHHHHHHHHhhC-CccccCCCcCcccccccCCCCc-CHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 6788889999999 999988887765432 111 111 0 11111 233578899999999999999999999
Q ss_pred HHHHHHh
Q 014060 379 SSFLYHN 385 (431)
Q Consensus 379 ~~~~~~~ 385 (431)
++.++++
T Consensus 455 g~nl~~~ 461 (543)
T 2v8i_A 455 GDNIIKI 461 (543)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 35
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=68.27 E-value=7.5 Score=38.81 Aligned_cols=73 Identities=22% Similarity=0.294 Sum_probs=49.7
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHHHHHHH-----cCCC-----------CCCcc----ccchhhHHH---HHHHHHHHhC
Q 014060 311 ITLCKASQVFPSDREFRDAAIEAGEVLWK-----NGLV-----------KKVGL----ADGAAGNAY---AFLSLYRLTG 367 (431)
Q Consensus 311 ~~l~~~~~~~~~~~~~~~~a~~~~~~~~~-----~g~~-----------~~~~L----CHG~aG~~~---~Ll~l~~~t~ 367 (431)
=.|+.++...+ ++.+++.|...++.+.. .|+. .+.+. |..+|+.+- =|.++++.||
T Consensus 112 GGLLSAy~Lsg-d~~lL~kA~dLad~LlpAFdTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTG 190 (478)
T 1nxc_A 112 GGLLSAYYLSG-EEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSG 190 (478)
T ss_dssp HHHHHHHHHHC-CHHHHHHHHHHHHHHGGGGCSSSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHC
T ss_pred hhhhhhhhccC-CHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHHHC
Confidence 35666788888 99999999999988732 2321 11111 223455443 3567899999
Q ss_pred CchHHHHHHHHHHHHHH
Q 014060 368 ETIYVERANAFSSFLYH 384 (431)
Q Consensus 368 ~~~~~~~a~~~~~~~~~ 384 (431)
|++|.+.|+++.+.+.+
T Consensus 191 d~~Y~~~a~~~~~~l~~ 207 (478)
T 1nxc_A 191 DPVFAEKVMKIRTVLNK 207 (478)
T ss_dssp CTHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHh
Confidence 99999999988776654
No 36
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=65.22 E-value=83 Score=30.43 Aligned_cols=42 Identities=14% Similarity=0.282 Sum_probs=31.9
Q ss_pred CcchHHHHHHHhcCCC-ChHHHHHHHHHHHHHHhccCCCCCCCC
Q 014060 247 ANGLAGILQVLLHFPL-SEEDAEDVKGTLRYMMSNRFPQSGNYP 289 (431)
Q Consensus 247 aHG~aGI~~~L~~~~~-~~~~~~~i~~~l~~~~~~~~~~~gnw~ 289 (431)
++-.+||+.+|+.... ++++.+.|+++++|+.+.+.+ ++.|.
T Consensus 292 ~~esa~il~~LM~~~~~~~~~~~aI~~Av~WL~s~Q~~-dg~w~ 334 (408)
T 1r76_A 292 STESARILLFLMEIEAPSDAVKQAIRGGVAWLNTSVIR-DRAWV 334 (408)
T ss_dssp HHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHSCCC-C----
T ss_pred HHHHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHhhcC-CCcee
Confidence 5667888888998764 788999999999999998775 66664
No 37
>3a0o_A Oligo alginate lyase; alpha/alpha ballel+anti-parallel beta sheet; 2.11A {Agrobacterium tumefaciens} PDB: 3afl_A*
Probab=59.47 E-value=1.8e+02 Score=30.60 Aligned_cols=26 Identities=19% Similarity=0.152 Sum_probs=19.7
Q ss_pred HHHHHHHHcCCcchHHHHHHHHHHHH
Q 014060 138 IGAVVANRMGDRSRRDFFLNLFLEIA 163 (431)
Q Consensus 138 l~~~~~~~~~d~~~~~~~~~~~~~~~ 163 (431)
.+...+..++|.++++.+.+.+....
T Consensus 214 ~la~ay~ltgd~kya~~a~~~L~~~~ 239 (776)
T 3a0o_A 214 HLAIAGRVLGRDDLLDASRKWLLAVA 239 (776)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 44556778899999998888776654
No 38
>1v5d_A Chitosanase; chitosan degradation, hydrolase, glycosil hydrolase, family 8; HET: PIN; 1.50A {Bacillus SP} SCOP: a.102.1.2 PDB: 1v5c_A*
Probab=58.70 E-value=63 Score=31.08 Aligned_cols=130 Identities=14% Similarity=0.151 Sum_probs=72.6
Q ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHhccCCCCCCCCCCC-CCCCC---cccccccCchHHHHHHHHHHhhCCCCH---
Q 014060 252 GILQVLLHFPLSEEDAEDVKGTLRYMMSNRFPQSGNYPVSE-GNPRD---KLVQWSHGATGVAITLCKASQVFPSDR--- 324 (431)
Q Consensus 252 GI~~~L~~~~~~~~~~~~i~~~l~~~~~~~~~~~gnw~~~~-~~~~~---~~~~WChG~~Gi~~~l~~~~~~~~~~~--- 324 (431)
|++.++.....+++.++...+.++|..+.......+.+..+ +.... ...+=-=|+.=|+.+|+.+.+.++ ++
T Consensus 79 GMl~Av~~a~~d~~d~~~FD~l~~wt~~~l~~~~~~L~aW~~~~~g~~~~d~n~AtDgDl~IA~ALl~A~~~Wg-~~g~~ 157 (386)
T 1v5d_A 79 GMIITVLMAGYDSNAQKIYDGLFKTARTFKSSQNPNLMGWVVADSKKAQGHFDSATDGDLDIAYSLLLAHKQWG-SNGTV 157 (386)
T ss_dssp HHHHHHHTBTTBTTHHHHHHHHHHHHHHTBCSSCTTSBCSEECSSGGGTTTSCCCHHHHHHHHHHHHHHHHHHC-SSSSS
T ss_pred HHHHHHHhCCCCCchHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCcCCCCCCCCHHHHHHHHHHHHHHHHcC-CCchH
Confidence 44444443334445557788888998875431122221111 10000 001111234447889999999998 76
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CCccccch----hh--------HHHHHHHHHHHhCCchHHHHHHHHHHHH
Q 014060 325 EFRDAAIEAGEVLWKNGLVK-KVGLADGA----AG--------NAYAFLSLYRLTGETIYVERANAFSSFL 382 (431)
Q Consensus 325 ~~~~~a~~~~~~~~~~g~~~-~~~LCHG~----aG--------~~~~Ll~l~~~t~~~~~~~~a~~~~~~~ 382 (431)
+|..+++++++.+++..... ..-+--|. .+ ....|-.+++.+++..|.+.+....+.+
T Consensus 158 ~Y~~~A~~il~~i~~~~~~~~~~~l~~g~~~~~~~~~~npSY~~p~~l~~f~~~~~~~~W~~v~~~~~~~l 228 (386)
T 1v5d_A 158 NYLKEAQDMITKGIKASNVTNNNQLNLGDWDSKSSLDTRPSDWMMSHLRAFYEFTGDKTWLTVINNLYDVY 228 (386)
T ss_dssp CHHHHHHHHHHHTHHHHHBCTTSSBCSSTTSCTTCCCBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcccCCCCeeeecccCCCCCCeechhhccHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 89999999988776653221 10010011 11 1256777888889988988887665554
No 39
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=56.99 E-value=89 Score=31.49 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHHHHHhccCCC---------CCCCCCC--CCCC-CCccc--ccccCchH-HHHHHHHHHhhCCC-CHHHH
Q 014060 264 EEDAEDVKGTLRYMMSNRFPQ---------SGNYPVS--EGNP-RDKLV--QWSHGATG-VAITLCKASQVFPS-DREFR 327 (431)
Q Consensus 264 ~~~~~~i~~~l~~~~~~~~~~---------~gnw~~~--~~~~-~~~~~--~WChG~~G-i~~~l~~~~~~~~~-~~~~~ 327 (431)
++.++.|+=.++|+++.+.+. +..|+.. +++. ...+. .-+--.+| .+-++..+++++++ |+.|-
T Consensus 188 ~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w~g~~~~Pe~~~~~R~~~~~~t~~~~~~AAalA~as~vf~~~D~~yA 267 (537)
T 3gzk_A 188 PPALEVAREEIAWLLTMQDPATGGVYHKVTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAALVYRPFDPALS 267 (537)
T ss_dssp CHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSCCCTTCCGGGCCSCEEECCBCHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCcCCCCcCcccCCCcceEeecCCcHHHHHHHHHHHHHHhhcccCHHHH
Confidence 577888888999998866532 2246432 2111 11111 11111223 33446667778873 66666
Q ss_pred HHHHHHHHHHHHcC-----CC-CC-C-ccccc--hhh----HHHHHHHHHHHhCCchHHHHHHHHH
Q 014060 328 DAAIEAGEVLWKNG-----LV-KK-V-GLADG--AAG----NAYAFLSLYRLTGETIYVERANAFS 379 (431)
Q Consensus 328 ~~a~~~~~~~~~~g-----~~-~~-~-~LCHG--~aG----~~~~Ll~l~~~t~~~~~~~~a~~~~ 379 (431)
+.+.+.++.+|+.. .. ++ . ..++. .+| ...+...||+.|+++.|++.+.+..
T Consensus 268 ~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~~Del~wAA~~Ly~aTgd~~Yl~~a~~~~ 333 (537)
T 3gzk_A 268 SCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAELRDELLWASCALLRMTGDSAWARVCEPLL 333 (537)
T ss_dssp HHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCCHHHHHHHHHHHHHHHCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCccchHHHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 66666666665431 10 11 1 11111 122 4566778999999999999887643
No 40
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=56.40 E-value=70 Score=31.25 Aligned_cols=118 Identities=21% Similarity=0.250 Sum_probs=65.0
Q ss_pred ChHHHHHHHHHHHHHHhccCCCC--------C-----CCCCCCCCCCCcccccc----cC---chHHHHHHHHHHhhCCC
Q 014060 263 SEEDAEDVKGTLRYMMSNRFPQS--------G-----NYPVSEGNPRDKLVQWS----HG---ATGVAITLCKASQVFPS 322 (431)
Q Consensus 263 ~~~~~~~i~~~l~~~~~~~~~~~--------g-----nw~~~~~~~~~~~~~WC----hG---~~Gi~~~l~~~~~~~~~ 322 (431)
-++.++.++=.++|+++.+.+.+ + -|........+.....+ -| +.-.+-++..++.++++
T Consensus 89 ~~d~ldeikwg~D~llk~~~~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~as~vfk~ 168 (433)
T 1ks8_A 89 LDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRN 168 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHCCBTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHHHHHhccc
Confidence 36677888888899988665321 1 23211100011111112 22 12233446667778863
Q ss_pred -CHHHHHHHHHHHHHHHHcCC--CCC-----Cccc--cchhh----HHHHHHHHHHHhCCchHHHHHHHHHH
Q 014060 323 -DREFRDAAIEAGEVLWKNGL--VKK-----VGLA--DGAAG----NAYAFLSLYRLTGETIYVERANAFSS 380 (431)
Q Consensus 323 -~~~~~~~a~~~~~~~~~~g~--~~~-----~~LC--HG~aG----~~~~Ll~l~~~t~~~~~~~~a~~~~~ 380 (431)
|+.|-+.+.+.++.+|+... ... ..-| -+.+| ...+-..||+.|+++.|++.+++...
T Consensus 169 ~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~~~ 240 (433)
T 1ks8_A 169 VDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLNTAESLYD 240 (433)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 78888888888777765321 100 1111 11244 34555678999999999999887543
No 41
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=53.20 E-value=23 Score=33.42 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=55.5
Q ss_pred CchHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHcCCCCC---Cccccchhh--------------HHHHHHHHHHHhC
Q 014060 305 GATGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK---VGLADGAAG--------------NAYAFLSLYRLTG 367 (431)
Q Consensus 305 G~~Gi~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~---~~LCHG~aG--------------~~~~Ll~l~~~t~ 367 (431)
|+.=|+.+|+.+.+.++ ++.|..+++++++.+++..+... .-|.=|.-| ...+|..+++.++
T Consensus 107 gDl~IA~ALl~A~~~Wg-~~~Y~~~A~~il~~i~~~~v~~~~g~~~llPg~~gf~~~~~~~~npSY~~p~~~~~fa~~~~ 185 (334)
T 1wzz_A 107 GDLLIALALGRAGKRFQ-RPDYIQDAMAIYGDVLNLMTMKAGPYVVLMPGAVGFTKKDSVILNLSYYVMPSLLQAFDLTA 185 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHEEEETTEEEECSCSSSCBCSSEEEECGGGCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhcccCCCCeEEECCCcccccCCCCCeechhhcCHHHHHHHHHccC
Confidence 44558899999999999 99999999999988877643221 122224332 1255666788889
Q ss_pred CchHHHHHHHHHHHHHH
Q 014060 368 ETIYVERANAFSSFLYH 384 (431)
Q Consensus 368 ~~~~~~~a~~~~~~~~~ 384 (431)
+..|.+.++...+.+.+
T Consensus 186 ~~~W~~~~~~~~~ll~~ 202 (334)
T 1wzz_A 186 DPRWRQVMEDGIRLVSA 202 (334)
T ss_dssp CTHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHH
Confidence 88999888776665533
No 42
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=52.66 E-value=36 Score=34.75 Aligned_cols=69 Identities=10% Similarity=-0.008 Sum_probs=44.1
Q ss_pred CChHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCCccccccHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHh
Q 014060 42 LPCETFLKAAVSLKDQVVEVTWRRGSGGGGEPGRGMDPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTCASVV 119 (431)
Q Consensus 42 ~~~~~~l~~A~~i~~~l~~~~w~~~~~~~~~~~~~~~~~LY~G~~Gial~l~~L~~~t~~~~~~~~a~~~l~~~~~~~ 119 (431)
...+++|+.|+++-+-+......-.. +. +.+..+=. -.+...+.||+.|++++|++.+.+..+.+....
T Consensus 271 ~~a~~~L~aA~~a~~fa~~~~~~y~~--~g------~~~~~De~-~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~ 339 (586)
T 3h7l_A 271 YDQQKYRNAAENGYWHLKEHNTQYLN--DG------EENIIDEY-CALLASVELFKATKETRYLEESRLWAQRLVARQ 339 (586)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHST--TS------CCCHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTE
T ss_pred cChHHHHHHHHHHHHHHHhcCccccC--CC------CccchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 44789999999988888754221111 00 01111111 124556789999999999999988887776654
No 43
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=52.19 E-value=22 Score=35.91 Aligned_cols=73 Identities=21% Similarity=0.184 Sum_probs=49.2
Q ss_pred HHHHHHhhCCCCHHHHHHHHHHHHHHHH-----cCCCC-----------CCccc--cchhhHH---HHHHHHHHHhCCch
Q 014060 312 TLCKASQVFPSDREFRDAAIEAGEVLWK-----NGLVK-----------KVGLA--DGAAGNA---YAFLSLYRLTGETI 370 (431)
Q Consensus 312 ~l~~~~~~~~~~~~~~~~a~~~~~~~~~-----~g~~~-----------~~~LC--HG~aG~~---~~Ll~l~~~t~~~~ 370 (431)
.|+.++.+.+ ++.+++.|...++.+.. .|+.. ..... ..+|+.+ .=|.++.+.|||++
T Consensus 177 GLLSAy~Lsg-d~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTGd~~ 255 (538)
T 1x9d_A 177 GLLSAYHLSG-DSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDKK 255 (538)
T ss_dssp HHHHHHHHHC-CHHHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHCCTH
T ss_pred hhhhHHHhcC-CHHHHHHHHHHHHHHHHhhcCCCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhCCcH
Confidence 4666777788 99999999999988731 23211 11100 1133333 34667899999999
Q ss_pred HHHHHHHHHHHHHHh
Q 014060 371 YVERANAFSSFLYHN 385 (431)
Q Consensus 371 ~~~~a~~~~~~~~~~ 385 (431)
|.+.|+++.+.+.+.
T Consensus 256 Y~~~a~r~~~~l~~~ 270 (538)
T 1x9d_A 256 FQEAVEKVTQHIHGL 270 (538)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999988877653
No 44
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=43.77 E-value=82 Score=32.31 Aligned_cols=112 Identities=13% Similarity=0.193 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHHHHHhccCCCC---------------CCCCC--CCCCCC-Cccccccc-Cc---hHHHHHHHHHHhhCC
Q 014060 264 EEDAEDVKGTLRYMMSNRFPQS---------------GNYPV--SEGNPR-DKLVQWSH-GA---TGVAITLCKASQVFP 321 (431)
Q Consensus 264 ~~~~~~i~~~l~~~~~~~~~~~---------------gnw~~--~~~~~~-~~~~~WCh-G~---~Gi~~~l~~~~~~~~ 321 (431)
+++++.++=.++|+++.+.+.. ..|.. .+++.. ..+. .|. |+ .-++-++..++.+++
T Consensus 227 ~d~ldeikwg~D~llk~q~~~g~~~~~~g~v~~~~~D~~w~g~~~~Pe~~~~~R~-~~~p~t~~~~~~AAalAaas~vfk 305 (609)
T 1ut9_A 227 PDILDEARWEIEFFKKMQVTEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRY-LRPVSTAATLNFAATLAQSARLWK 305 (609)
T ss_dssp CHHHHHHHHHHHHHHHHBCCTTTCGGGTTCEECEEEESSCCCSSCCGGGCCSBEE-ECCEEHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhccCCCCcceEEEEecCCCCCcccCCCCCChhhCCCcee-ecCCCcHHHHHHHHHHHHHHHhcc
Confidence 6778889999999998665422 14532 222211 1111 132 21 123344666777775
Q ss_pred C-CHHHHHHHHHHHHHHHHcC-----CCC-C---------Cccccchhh----HHHHHHHHHHHhCCchHHHHHHHH
Q 014060 322 S-DREFRDAAIEAGEVLWKNG-----LVK-K---------VGLADGAAG----NAYAFLSLYRLTGETIYVERANAF 378 (431)
Q Consensus 322 ~-~~~~~~~a~~~~~~~~~~g-----~~~-~---------~~LCHG~aG----~~~~Ll~l~~~t~~~~~~~~a~~~ 378 (431)
+ |+.|-+.+.+.++.+|+.. ... . .-.|. .| ...+-..||+.|+|+.|++.+++.
T Consensus 306 ~~d~~ya~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~~~~~Y~s--s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~ 380 (609)
T 1ut9_A 306 DYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPGSGGPGGGPYND--DYVGDEFYWAACELYVTTGKDEYKNYLMNS 380 (609)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHCTTCCBCCCCSSSSCBSCCCCB--SCCHHHHHHHHHHHHHHHCCHHHHHHHHTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCcccccccccccCccCCCCCCC--CCcccHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 3 7888888888777776532 110 0 01122 33 344556789999999999887653
No 45
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=43.76 E-value=1.2e+02 Score=31.39 Aligned_cols=116 Identities=16% Similarity=0.292 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHHHHhccCCCC-C---------CCCCCC-CCCC-Ccc--cccccC-chHHHHHHHHHHhhCCC-CHHHH
Q 014060 264 EEDAEDVKGTLRYMMSNRFPQS-G---------NYPVSE-GNPR-DKL--VQWSHG-ATGVAITLCKASQVFPS-DREFR 327 (431)
Q Consensus 264 ~~~~~~i~~~l~~~~~~~~~~~-g---------nw~~~~-~~~~-~~~--~~WChG-~~Gi~~~l~~~~~~~~~-~~~~~ 327 (431)
++.++.++=.++|+++.+.+.. | +|.... ++.. ..+ ..-+.- +...+-++..++.++++ |+.|-
T Consensus 232 ~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~~~Pe~~~~~R~~~~~~s~~a~e~AAAlAaAS~vfk~~D~~yA 311 (639)
T 1clc_A 232 PDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGFIMPENEHDERFFVPWSSAATADFVAMTAMAARIFRPYDPQYA 311 (639)
T ss_dssp CHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCSCCGGGCCSCCEEEEECHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCCCCchhcCCCceEecCCcHHHHHHHHHHHHHHHhccccCHHHH
Confidence 5677888888999998766533 3 243221 1111 111 111111 22334446667777753 78888
Q ss_pred HHHHHHHHHHHHcC-----CC-CCC--ccc--cchhh----HHHHHHHHHHHhCCchHHHHHHHHH
Q 014060 328 DAAIEAGEVLWKNG-----LV-KKV--GLA--DGAAG----NAYAFLSLYRLTGETIYVERANAFS 379 (431)
Q Consensus 328 ~~a~~~~~~~~~~g-----~~-~~~--~LC--HG~aG----~~~~Ll~l~~~t~~~~~~~~a~~~~ 379 (431)
+.+.+.++.+|+.. .. .+. .-| -+.+| ...+-..||+.|+++.|++.+.+..
T Consensus 312 ~~~L~~Ak~l~~fA~~~~~~~y~~~~~~~~g~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~ 377 (639)
T 1clc_A 312 EKCINAAKVSYEFLKNNPANVFANQSGFSTGEYATVSDADDRLWAAAEMWETLGDEEYLRDFENRA 377 (639)
T ss_dssp HHHHHHHHHHHHHHHHCCSCCCCCCTTCCSCCCCCSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCccCCCccccccccCCCCcchHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 88888887776532 11 110 111 12233 3444557899999999999887654
No 46
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=38.63 E-value=2.5e+02 Score=26.25 Aligned_cols=36 Identities=22% Similarity=0.361 Sum_probs=31.0
Q ss_pred CcchHHHHHHHhcCCCChHHHHHHHHHHHHHHhccC
Q 014060 247 ANGLAGILQVLLHFPLSEEDAEDVKGTLRYMMSNRF 282 (431)
Q Consensus 247 aHG~aGI~~~L~~~~~~~~~~~~i~~~l~~~~~~~~ 282 (431)
++-.+||+.+|+....++++++.|+++++|+.+.+.
T Consensus 216 ~~es~giv~~LM~~~~~~~v~~aI~~Av~WL~~~q~ 251 (332)
T 1gxm_A 216 GSESVGVLAFLMTQPQTAEIEQAVRAGVAWFNSPRT 251 (332)
T ss_dssp TTTHHHHHHHHTTSCCCHHHHHHHHHHHHHHTCTTT
T ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHhccc
Confidence 677889999999876678899999999999987665
No 47
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=38.55 E-value=26 Score=35.12 Aligned_cols=61 Identities=20% Similarity=0.198 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHH-----cCCC------C-----CCccccchhhH---HHHHHHHHHHhCCchHHHHHHHHHHHHHH
Q 014060 324 REFRDAAIEAGEVLWK-----NGLV------K-----KVGLADGAAGN---AYAFLSLYRLTGETIYVERANAFSSFLYH 384 (431)
Q Consensus 324 ~~~~~~a~~~~~~~~~-----~g~~------~-----~~~LCHG~aG~---~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~ 384 (431)
+.+++.|...++.+.. .|+. + ..+-+..+|+. ..=|.++.+.|||++|.+.|+++.+.+.+
T Consensus 131 ~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~ 210 (503)
T 1hcu_A 131 NSLLRQAQTLANGLKVAFTTPSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLN 210 (503)
T ss_dssp HHHHHHHHHHHHHHGGGGCSSSSCCCSEEECSSSCEECCCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCcceeecccCCCCCCCCccccccccceeeehHHHHHHhCChHHHHHHHHHHHHHHh
Confidence 4788888888887732 2321 0 01112223443 34466789999999999999998888765
No 48
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=36.61 E-value=1.4e+02 Score=30.58 Aligned_cols=76 Identities=13% Similarity=0.097 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccccCchHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHHHHcCC
Q 014060 264 EEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPRDKLVQWSHGATGVAITLCKASQVFPS-DREFRDAAIEAGEVLWKNGL 342 (431)
Q Consensus 264 ~~~~~~i~~~l~~~~~~~~~~~gnw~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~~-~~~~~~~a~~~~~~~~~~g~ 342 (431)
+...+.++++++++.++|.+ +|+|+...+. =+--.||.++ +..+++. ++ +...++...+.+.-.
T Consensus 9 ~~~~~~~~~~~~~~~~~q~~-dG~w~~~~~~-------~~~~~~~~v~----~~~~~~~~~~---~~~~~~~~yl~~~Q~ 73 (631)
T 2sqc_A 9 PAYARTLDRAVEYLLSCQKD-EGYWWGPLLS-------NVTMEAEYVL----LCHILDRVDR---DRMEKIRRYLLHEQR 73 (631)
T ss_dssp CHHHHHHHHHHHHHHHHCCT-TSCCCCCEEC-------CTHHHHHHHH----HHHHTTCCCH---HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHhcCC-CCcccccCCC-------cchhhHHHHH----HHHHhCCCCH---HHHHHHHHHHHHhcC
Confidence 34567899999999998876 8999632210 0112333333 3444442 34 344455555555432
Q ss_pred CC-CCccccchhh
Q 014060 343 VK-KVGLADGAAG 354 (431)
Q Consensus 343 ~~-~~~LCHG~aG 354 (431)
.. .-++|++-.|
T Consensus 74 ~dGgW~~~~~~~~ 86 (631)
T 2sqc_A 74 EDGTWALYPGGPP 86 (631)
T ss_dssp TTSCCCSSTTCCC
T ss_pred CCCCccCCCCCCc
Confidence 22 3678887554
No 49
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=34.38 E-value=3.3e+02 Score=26.37 Aligned_cols=133 Identities=14% Similarity=0.228 Sum_probs=72.7
Q ss_pred HHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCCCCcceeeccccCCCCcchHHHHHHHhcCCCChHHHHH
Q 014060 190 FLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWHGTRYWGAANGLAGILQVLLHFPLSEEDAED 269 (431)
Q Consensus 190 ~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~~~~~~w~~~~~~G~aHG~aGI~~~L~~~~~~~~~~~~ 269 (431)
.+++...||+.|+++ .++..+.+..-+.... . ....+.|.++ .+|....|.+....+.+++.
T Consensus 215 ~~WAAa~Ly~aTgd~----~Yl~~~~~~~~~~~~~--~----~~~~~~Wd~~--------~~g~~~lla~~~~~~~~~~~ 276 (433)
T 1ks8_A 215 LVWAAAWLYRATNDN----TYLNTAESLYDEFGLQ--N----WGGGLNWDSK--------VSGVQVLLAKLTNKQAYKDT 276 (433)
T ss_dssp HHHHHHHHHHHHCCH----HHHHHHHHHHHHTTGG--G----SCCCCCSSCC--------HHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHhCCH----HHHHHHHHHHHhcCcC--c----CcCCcCccch--------hhHHHHHHhhccChHHHHHH
Confidence 588999999999984 4444443222111110 0 0112445443 24554445444345677888
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCCccccccc--CchHHHHHHHHHHhh-CCCCHHHHHHHHHHHHHHHHcCCCCCC
Q 014060 270 VKGTLRYMMSNRFPQSGNYPVSEGNPRDKLVQWSH--GATGVAITLCKASQV-FPSDREFRDAAIEAGEVLWKNGLVKKV 346 (431)
Q Consensus 270 i~~~l~~~~~~~~~~~gnw~~~~~~~~~~~~~WCh--G~~Gi~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~g~~~~~ 346 (431)
++..+++++.......+..+ ....|+- =....++.++.+.+. ++ ++++.+.+.+-++.++=. ++.
T Consensus 277 ~~~~~~~~~~~~~~tp~Gl~--------~~~~WGs~~~~~n~a~l~~~~~~~~~~-~~~y~~~A~~qldYiLG~---n~~ 344 (433)
T 1ks8_A 277 VQSYVNYLINNQQKTPKGLL--------YIDMWGTLRHAANAAFIMLEAAELGLS-ASSYRQFAQTQIDYALGD---GGR 344 (433)
T ss_dssp HHHHHHHHHHTSCBCTTSCB--------CCCSTTHHHHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHTT---TSS
T ss_pred HHHHHHHHHhcCCcCCCCce--------eecCCchhHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHhHhhccCC---CCc
Confidence 88888887753221111111 1135742 123344445556666 77 889999999888888633 235
Q ss_pred ccccch
Q 014060 347 GLADGA 352 (431)
Q Consensus 347 ~LCHG~ 352 (431)
|+..|.
T Consensus 345 SyvvG~ 350 (433)
T 1ks8_A 345 SFVCGF 350 (433)
T ss_dssp CCBTTS
T ss_pred ceEecc
Confidence 555554
No 50
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=34.34 E-value=62 Score=32.10 Aligned_cols=62 Identities=21% Similarity=0.280 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHH-----cCCC------C----CCccccchhhHH---HHHHHHHHHhCCchHHHHHHHHHHHHHHh
Q 014060 324 REFRDAAIEAGEVLWK-----NGLV------K----KVGLADGAAGNA---YAFLSLYRLTGETIYVERANAFSSFLYHN 385 (431)
Q Consensus 324 ~~~~~~a~~~~~~~~~-----~g~~------~----~~~LCHG~aG~~---~~Ll~l~~~t~~~~~~~~a~~~~~~~~~~ 385 (431)
+.+++.|...++.+.. .|+. + ...-|..+|+.+ .=|.++.+.|||++|.+.|+++.+.+.+.
T Consensus 118 ~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~ 197 (475)
T 2ri9_A 118 DGLLDQSRNLADVLKFAFDTPSGVPYNNINITSHGNDGATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAESYLLKP 197 (475)
T ss_dssp HHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHHHHHHHHHHSCTHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCceeecccCCCcCCCccchhccccceeeHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 6888888888887732 2322 0 012223344443 44567899999999999999998887653
No 51
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=31.64 E-value=2.8e+02 Score=27.60 Aligned_cols=121 Identities=17% Similarity=0.123 Sum_probs=69.2
Q ss_pred ChHHHHHHHHHHHHHHhccCCCCCCCCCCCC---CCCCcccccccCch---HH---HHHHHHHHhhCCCCHHHHHHHHHH
Q 014060 263 SEEDAEDVKGTLRYMMSNRFPQSGNYPVSEG---NPRDKLVQWSHGAT---GV---AITLCKASQVFPSDREFRDAAIEA 333 (431)
Q Consensus 263 ~~~~~~~i~~~l~~~~~~~~~~~gnw~~~~~---~~~~~~~~WChG~~---Gi---~~~l~~~~~~~~~~~~~~~~a~~~ 333 (431)
++.+++.+.+.-+.+..-+......-|..+- ........|..|.. ++ .+=+..+.++++ |++|.+.+.++
T Consensus 123 d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTG-d~~Y~~~a~r~ 201 (511)
T 1dl2_A 123 KTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTG-NRTYWELVERV 201 (511)
T ss_dssp HHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHT-CHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHC-ChHHHHHHHHH
Confidence 4566777777778777655411233444331 11111123443332 22 233556788999 99999999999
Q ss_pred HHHHHHc--------CCC------CCCcccc-----chhh--HHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Q 014060 334 GEVLWKN--------GLV------KKVGLAD-----GAAG--NAYAFLSLYRLTGETIYVERANAFSSFLYH 384 (431)
Q Consensus 334 ~~~~~~~--------g~~------~~~~LCH-----G~aG--~~~~Ll~l~~~t~~~~~~~~a~~~~~~~~~ 384 (431)
.+.+|+. |+. .+-.++. |..| --+.|++.|-.++++.|++.-.+..+-+..
T Consensus 202 ~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYLlK~~il~~d~~y~~m~~~a~~~i~~ 273 (511)
T 1dl2_A 202 YEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETLYYDLYRKSMEGMKK 273 (511)
T ss_dssp HHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 8888752 332 1112222 3333 235678888888888888776666555544
No 52
>1syq_B Talin 1; cytoskeleton, vinculin, cell adhesion; 2.42A {Homo sapiens}
Probab=26.63 E-value=41 Score=18.02 Aligned_cols=19 Identities=32% Similarity=0.520 Sum_probs=15.6
Q ss_pred cchHHHHHHHHHccCcccC
Q 014060 406 QGLAGTACIWFDLLEPVNA 424 (431)
Q Consensus 406 ~G~aGI~~~Ll~l~~p~~~ 424 (431)
.|++|...-|+|-.+|..+
T Consensus 7 kglagavsellrsaqpasa 25 (26)
T 1syq_B 7 KGLAGAVSELLRSAQPASA 25 (26)
T ss_dssp HHHHHHHHHHHHHTSCTTC
T ss_pred hHhHHHHHHHHHhcCcccc
Confidence 5889999999998888653
No 53
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=26.31 E-value=1.1e+02 Score=31.31 Aligned_cols=70 Identities=21% Similarity=0.339 Sum_probs=42.8
Q ss_pred HHHHHHHHHhhCCC-CHHHHHHHHHHHHHHHHcC-----CCC--CCccccchhh----HHHHHHHHHHHhCCchHHHHHH
Q 014060 309 VAITLCKASQVFPS-DREFRDAAIEAGEVLWKNG-----LVK--KVGLADGAAG----NAYAFLSLYRLTGETIYVERAN 376 (431)
Q Consensus 309 i~~~l~~~~~~~~~-~~~~~~~a~~~~~~~~~~g-----~~~--~~~LCHG~aG----~~~~Ll~l~~~t~~~~~~~~a~ 376 (431)
.+-++..++.++++ |+.|-+.+.+.++.+|+.. ... ..+=.-+.+| ...+-..||+.|+++.|++.+.
T Consensus 156 ~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~ 235 (614)
T 1g87_A 156 TAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAGYTAASGYYSSSSFYDDLSWAAVWLYLATNDSTYLDKAE 235 (614)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTTCCTTTTTSCCSCSHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCcCCcCCCCchhHHHHHHHHHHHHhCCHHHHHHHH
Confidence 34446667777763 7888888888777776532 110 0110112233 3455567899999999998877
Q ss_pred HH
Q 014060 377 AF 378 (431)
Q Consensus 377 ~~ 378 (431)
+.
T Consensus 236 ~~ 237 (614)
T 1g87_A 236 SY 237 (614)
T ss_dssp HT
T ss_pred HH
Confidence 53
No 54
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=25.41 E-value=5.9e+02 Score=26.48 Aligned_cols=44 Identities=11% Similarity=0.161 Sum_probs=29.5
Q ss_pred CCCcchHHHHHHHhcCCC---ChHHHHHHHHHHHHHHhccCCCCCCCC
Q 014060 245 GAANGLAGILQVLLHFPL---SEEDAEDVKGTLRYMMSNRFPQSGNYP 289 (431)
Q Consensus 245 G~aHG~aGI~~~L~~~~~---~~~~~~~i~~~l~~~~~~~~~~~gnw~ 289 (431)
.+.+|++-.+.+|..+.. +....+.++++++|+++.+.+ +|.|.
T Consensus 584 ~~~Y~T~~al~AL~~aG~~~~~~~~~~~i~rav~~Lls~Q~~-DGGWg 630 (732)
T 1w6k_A 584 CFTYGTWFGLEAFACMGQTYRDGTACAEVSRACDFLLSRQMA-DGGWG 630 (732)
T ss_dssp SHHHHHHHHHHHHHHTTCCCBTTBCCHHHHHHHHHHHTTCCT-TSCCC
T ss_pred ccchHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHhccc-CCCCC
Confidence 345666666667766543 222236789999999998775 78884
No 55
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=25.30 E-value=3.3e+02 Score=27.76 Aligned_cols=70 Identities=21% Similarity=0.277 Sum_probs=43.7
Q ss_pred HHHHHHHHHhhCCC-CHHHHHHHHHHHHHHHHcCC--CCCC--c-----cccchhh----HHHHHHHHHHHhCCchHHHH
Q 014060 309 VAITLCKASQVFPS-DREFRDAAIEAGEVLWKNGL--VKKV--G-----LADGAAG----NAYAFLSLYRLTGETIYVER 374 (431)
Q Consensus 309 i~~~l~~~~~~~~~-~~~~~~~a~~~~~~~~~~g~--~~~~--~-----LCHG~aG----~~~~Ll~l~~~t~~~~~~~~ 374 (431)
.+-++..+++++++ |+.|-+.+.+.++.+|+... ...+ + =.-+.+| ...+-..||+.|+++.|++.
T Consensus 222 ~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~~~y~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~ 301 (611)
T 2yik_A 222 TAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGVVQGEDGPKGYYGSSKWQDDYCWAAAWLYLATQNEHYLDE 301 (611)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCCCCGGGTTTTTSCCCCSHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCcccCCCcccCcCCCCCCcccHHHHHHHHHHHHhCCHHHHHH
Confidence 44556677778753 78888888888877765321 0001 1 0112233 34555678999999999988
Q ss_pred HHHH
Q 014060 375 ANAF 378 (431)
Q Consensus 375 a~~~ 378 (431)
+++.
T Consensus 302 a~~~ 305 (611)
T 2yik_A 302 AFKY 305 (611)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 56
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=23.52 E-value=1.6e+02 Score=27.95 Aligned_cols=79 Identities=15% Similarity=0.199 Sum_probs=51.5
Q ss_pred CchHHHHHHHHHHhhCCCCH---HHHHHHHHHHHHHHHcCCCCC-Cccccch--hh---------HHHHHHHHHHHhCCc
Q 014060 305 GATGVAITLCKASQVFPSDR---EFRDAAIEAGEVLWKNGLVKK-VGLADGA--AG---------NAYAFLSLYRLTGET 369 (431)
Q Consensus 305 G~~Gi~~~l~~~~~~~~~~~---~~~~~a~~~~~~~~~~g~~~~-~~LCHG~--aG---------~~~~Ll~l~~~t~~~ 369 (431)
|+.=|+.+|+.+.+.++ ++ +|.++++++++.+++..+..+ .-|.-|. .+ .-.+|..+++.+++.
T Consensus 121 gDl~IA~ALl~A~~~W~-~~g~~~Y~~~A~~i~~~i~~~~~~~~~~~l~pg~~~~~~~~~npSY~~p~~~~~fa~~~~~~ 199 (363)
T 1kwf_A 121 ADEDIALALIFADKLWG-SSGAINYGQEARTLINNLYNHCVEHGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTGDT 199 (363)
T ss_dssp HHHHHHHHHHHHHHHHC-SSSSSCHHHHHHHHHHHHHHHHBCTTTCCBCSBSSSCBTTBBCGGGCCHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHhC-CCcchhHHHHHHHHHHHHHHHhccCCCeEEeccccCCCCCEecchhcCHHHHHHHHHccCCc
Confidence 44458899999999998 76 899999999988766533211 1122232 11 123445566777888
Q ss_pred hHHHHHHHHHHHHHH
Q 014060 370 IYVERANAFSSFLYH 384 (431)
Q Consensus 370 ~~~~~a~~~~~~~~~ 384 (431)
.|.+.+....+.+.+
T Consensus 200 ~W~~~~~~~~~~l~~ 214 (363)
T 1kwf_A 200 RWNQVADKCYQIVEE 214 (363)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 898887766555433
No 57
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=23.36 E-value=83 Score=29.56 Aligned_cols=42 Identities=12% Similarity=-0.027 Sum_probs=36.7
Q ss_pred CCccccccHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHh
Q 014060 78 DPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTCASVV 119 (431)
Q Consensus 78 ~~~LY~G~~Gial~l~~L~~~t~~~~~~~~a~~~l~~~~~~~ 119 (431)
..+.-+|-.=||+.|+..++..+++.|.+.|.++++.+.+.-
T Consensus 101 ~n~AtDgDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~i~~~~ 142 (334)
T 1wzz_A 101 KNNATDGDLLIALALGRAGKRFQRPDYIQDAMAIYGDVLNLM 142 (334)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 356778888899999999999999999999999999888753
No 58
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=22.45 E-value=2.1e+02 Score=29.89 Aligned_cols=25 Identities=16% Similarity=0.341 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCC
Q 014060 265 EDAEDVKGTLRYMMSNRFPQSGNYPV 290 (431)
Q Consensus 265 ~~~~~i~~~l~~~~~~~~~~~gnw~~ 290 (431)
...+.+.++++|+.+.|.+ +|.|+.
T Consensus 478 ~~~~~i~~av~wLls~Q~~-DGgw~a 502 (732)
T 1w6k_A 478 IPRERLCDAVAVLLNMRNP-DGGFAT 502 (732)
T ss_dssp CCHHHHHHHHHHHHTTCCT-TSCBCS
T ss_pred hhHHHHHHHHHHHHHhcCC-CCCEEe
Confidence 3456889999999998765 888964
No 59
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=21.00 E-value=5.7e+02 Score=24.70 Aligned_cols=138 Identities=12% Similarity=0.181 Sum_probs=70.5
Q ss_pred HHHHHHHHhhhhCCCCCchhhHHHHHHHHHHcchhccccCCCCCCcceeeccccCCCCcchHHHHHHHhcCCCChHHHHH
Q 014060 190 FLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWHGTRYWGAANGLAGILQVLLHFPLSEEDAED 269 (431)
Q Consensus 190 ~i~~Ll~l~~~~~~~~~~~~~i~~~~~~il~~~~~~~~~~~~~~~~~~w~~~~~~G~aHG~aGI~~~L~~~~~~~~~~~~ 269 (431)
..++...||+.|+++. ++..+.+.. ................+.|.++ .+|+...|.+...+..+++.
T Consensus 213 ~~WAAa~Ly~aTgd~~----Yl~~a~~~~-~~~~~~~~~~~~~~~~~~Wd~~--------~~g~~~lla~~~~~~~~~~~ 279 (441)
T 1ia6_A 213 LAWAATWLYTATNDST----YITDAEQFI-TLGNTMNENKMQDKWTMCWDDM--------YVPAALRLAQITGKQIYKDA 279 (441)
T ss_dssp HHHHHHHHHHHHCCTH----HHHHHHHHT-TC------CGGGCSSCSSSSCC--------HHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHhCCHH----HHHHHHHHH-hhhhhcccccccCCCcCCccch--------HHHHHHHHHhccCcHHHHHH
Confidence 5789999999999853 443333211 1110000000000111234332 45555444444345677788
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCCcccccccCc----hHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHcCCCCC
Q 014060 270 VKGTLRYMMSNRFPQSGNYPVSEGNPRDKLVQWSHGA----TGVAITLCKASQVFPSDREFRDAAIEAGEVLWKNGLVKK 345 (431)
Q Consensus 270 i~~~l~~~~~~~~~~~gnw~~~~~~~~~~~~~WChG~----~Gi~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~ 345 (431)
++..+++.........+.++- ...| |. ...+...+.+.+.++ ++++.+.+.+-++.++=.. ..+
T Consensus 280 ~~~~~~~~~~~~~~tp~Gl~~--------~~~W--Gs~~~~~~~a~l~~~~~~~~~-~~~y~~~A~~qldYiLG~N-P~~ 347 (441)
T 1ia6_A 280 IEFNFNYWKTQVTTTPGGLKW--------LSNW--GVLRYAAAESMVMLVYCKQNP-DQSLLDLAKKQVDYILGDN-PAN 347 (441)
T ss_dssp HHHHHHHHHHTSCBCTTSCBC--------CCST--THHHHHHHHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHTCS-TTC
T ss_pred HHHHHHHHHhhcccCCCCcee--------cCCc--chHHHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHhcCCC-CCC
Confidence 888787765322111233321 1356 33 233334444567888 9999999998888886321 123
Q ss_pred Cccccch
Q 014060 346 VGLADGA 352 (431)
Q Consensus 346 ~~LCHG~ 352 (431)
.|+..|.
T Consensus 348 ~SyvvG~ 354 (441)
T 1ia6_A 348 MSYIIGY 354 (441)
T ss_dssp CCSBTTS
T ss_pred ceeEEec
Confidence 4565554
No 60
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=20.88 E-value=1e+02 Score=29.26 Aligned_cols=41 Identities=15% Similarity=0.070 Sum_probs=35.7
Q ss_pred CCccccccHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHH
Q 014060 78 DPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTCASV 118 (431)
Q Consensus 78 ~~~LY~G~~Gial~l~~L~~~t~~~~~~~~a~~~l~~~~~~ 118 (431)
..+.-+|-.=||+.|+..++..+++.|.+.|.++++.+.+.
T Consensus 90 ~nsAtDGDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~I~~~ 130 (355)
T 3qxf_A 90 SNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIARE 130 (355)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 34667787889999999999999999999999999988774
Done!