Query 014061
Match_columns 431
No_of_seqs 185 out of 1883
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 04:47:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 1.5E-95 5E-100 773.3 37.7 382 49-430 1-383 (547)
2 3rtk_A 60 kDa chaperonin 2; he 100.0 4.8E-96 2E-100 775.7 31.5 381 49-430 1-382 (546)
3 1iok_A Chaperonin 60; chaperon 100.0 1.7E-95 6E-100 773.1 32.4 382 49-430 2-384 (545)
4 1we3_A CPN60(groel); chaperoni 100.0 2.5E-94 8.6E-99 764.3 37.9 381 49-430 1-382 (543)
5 3p9d_C T-complex protein 1 sub 100.0 1E-73 3.5E-78 610.5 25.6 347 51-430 12-440 (590)
6 3p9d_A T-complex protein 1 sub 100.0 5.1E-70 1.7E-74 580.5 24.4 330 50-402 16-409 (559)
7 3iyg_B T-complex protein 1 sub 100.0 4.9E-68 1.7E-72 560.6 34.3 323 51-402 3-384 (513)
8 1q3q_A Thermosome alpha subuni 100.0 2E-68 6.7E-73 567.4 31.1 325 50-402 15-398 (548)
9 3ko1_A Chaperonin; 9-fold symm 100.0 4.6E-68 1.6E-72 564.5 33.7 326 50-403 22-406 (553)
10 1a6d_A Thermosome (alpha subun 100.0 2.8E-68 9.4E-73 565.9 30.2 323 51-402 15-395 (545)
11 1a6d_B Thermosome (beta subuni 100.0 5.1E-68 1.7E-72 563.9 30.8 324 51-402 14-396 (543)
12 3ruv_A Chaperonin, CPN; double 100.0 7E-68 2.4E-72 562.6 31.7 325 51-403 12-392 (543)
13 3iyg_H T-complex protein 1 sub 100.0 1.6E-67 5.5E-72 556.6 34.3 327 52-403 5-388 (515)
14 3p9d_D T-complex protein 1 sub 100.0 5.5E-68 1.9E-72 561.7 28.3 326 50-402 11-401 (528)
15 3iyg_D T-complex protein 1 sub 100.0 9.1E-67 3.1E-71 551.5 32.6 323 51-402 4-391 (518)
16 3iyg_A T-complex protein 1 sub 100.0 4.4E-66 1.5E-70 547.5 34.2 329 51-402 3-393 (529)
17 3iyg_E T-complex protein 1 sub 100.0 6.3E-66 2.2E-70 544.9 35.1 325 51-403 3-388 (515)
18 3p9d_G T-complex protein 1 sub 100.0 4.3E-67 1.5E-71 557.0 23.5 326 51-402 17-400 (550)
19 3p9d_B T-complex protein 1 sub 100.0 3.8E-67 1.3E-71 555.6 21.0 324 50-402 9-391 (527)
20 3p9d_E T-complex protein 1 sub 100.0 5.6E-66 1.9E-70 549.7 28.2 346 34-402 21-430 (562)
21 3iyg_Q T-complex protein 1 sub 100.0 2.9E-65 9.8E-70 539.5 32.1 320 53-402 5-383 (512)
22 3iyg_G T-complex protein 1 sub 100.0 5.5E-64 1.9E-68 529.9 34.8 324 52-403 3-387 (515)
23 3p9d_H T-complex protein 1 sub 100.0 7E-65 2.4E-69 541.9 24.1 320 53-402 20-408 (568)
24 3iyg_Z T-complex protein 1 sub 100.0 2.5E-63 8.4E-68 524.9 32.4 322 52-402 4-390 (517)
25 3p9d_F T-complex protein 1 sub 100.0 1E-63 3.4E-68 531.2 21.6 324 51-402 10-402 (546)
26 3aq1_B Thermosome subunit; gro 100.0 4.9E-58 1.7E-62 482.9 23.8 289 86-402 1-349 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.9E-58 6.5E-63 420.1 14.0 193 233-425 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 7.6E-57 2.6E-61 410.4 16.1 189 236-424 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 3.7E-42 1.3E-46 299.7 12.6 144 238-381 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 1.7E-21 5.8E-26 178.5 12.3 134 229-386 1-162 (178)
31 1ass_A Thermosome; chaperonin, 99.8 5.4E-21 1.8E-25 172.1 13.5 127 236-385 1-154 (159)
32 1g6h_A High-affinity branched- 24.1 45 0.0015 30.8 3.1 42 261-302 169-215 (257)
33 1sgw_A Putative ABC transporte 23.9 53 0.0018 29.6 3.5 42 261-302 149-195 (214)
34 3swy_A Cyclic nucleotide-gated 23.3 72 0.0025 21.9 3.2 13 407-419 31-43 (46)
35 3twe_A Alpha4H; unknown functi 21.7 53 0.0018 19.3 1.8 13 407-419 9-21 (27)
36 3ggz_E Vacuolar protein-sortin 21.6 54 0.0018 20.3 2.0 18 403-420 12-29 (29)
37 1pq4_A Periplasmic binding pro 21.0 1.4E+02 0.005 27.9 6.1 38 274-311 221-258 (291)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.5e-95 Score=773.31 Aligned_cols=382 Identities=46% Similarity=0.743 Sum_probs=377.1
Q ss_pred cchhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhc
Q 014061 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (431)
Q Consensus 49 ~~k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~ 127 (431)
++|++.||.++|.+|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+|||||||++++|++|
T Consensus 1 ~~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 80 (547)
T 1kp8_A 1 AAKDVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKA 80 (547)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhh
Confidence 36899999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccCChHHHHHHHhhcCCChHHHHHH
Q 014061 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (431)
Q Consensus 128 ~~~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 207 (431)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++.++|.++|++|++++++++++
T Consensus 81 d~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~l 160 (547)
T 1kp8_A 81 NDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKL 160 (547)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHH
T ss_pred ccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCceEEecCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeeccccCCHHhHHHHHHHHH
Q 014061 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (431)
Q Consensus 208 i~~Av~~vg~~g~I~i~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~I~~~~~l~~~le~i~ 287 (431)
+++|+.+++++|.|++++|++++||+++++||+|+++|.||||++++++|+++++|||||++|++|++++++++++|++.
T Consensus 161 iadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~ 240 (547)
T 1kp8_A 161 IAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVA 240 (547)
T ss_dssp HHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHH
T ss_pred HHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCce
Q 014061 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIAR 367 (431)
Q Consensus 288 ~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~ 367 (431)
+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++|+++|+|||++|||++++++.|++++++++++||+|+
T Consensus 241 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~ 320 (547)
T 1kp8_A 241 KAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAK 320 (547)
T ss_dssp GGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEE
T ss_pred hcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCeEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhhcCCeEEEEeCcc
Q 014061 368 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVCYM 430 (431)
Q Consensus 368 ~V~i~~~~~~ii~g~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRla~l~g~~a~i~vGg~ 430 (431)
+|++++++|++++||++++.+++|++||+.+++.++|+||||+|+||||||+||+|+|.|||+
T Consensus 321 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~ 383 (547)
T 1kp8_A 321 RVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAA 383 (547)
T ss_dssp EEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCS
T ss_pred EEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCC
Confidence 999999999999999999999999999999999999999999999999999999999999996
No 2
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=4.8e-96 Score=775.73 Aligned_cols=381 Identities=47% Similarity=0.741 Sum_probs=308.3
Q ss_pred cchhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhc
Q 014061 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (431)
Q Consensus 49 ~~k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~ 127 (431)
|+|++.||.++|..|+.|+++|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+|||||||++++|++|
T Consensus 1 ~~k~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~q 80 (546)
T 3rtk_A 1 MAKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKT 80 (546)
T ss_dssp ------------------------------------------------------------CCCHHHHHHHHHHHHHHTSC
T ss_pred CCceeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccCChHHHHHHHhhcCCChHHHHHH
Q 014061 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (431)
Q Consensus 128 ~~~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 207 (431)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++.++|.++|++|++ +++++++
T Consensus 81 d~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~l 159 (546)
T 3rtk_A 81 DDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDL 159 (546)
T ss_dssp C-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred hhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 8899999
Q ss_pred HHHHHHhhhcCCceEEecCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeeccccCCHHhHHHHHHHHH
Q 014061 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (431)
Q Consensus 208 i~~Av~~vg~~g~I~i~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~I~~~~~l~~~le~i~ 287 (431)
+++|+.+++++|.|+++.+++..+.+++++||+|+++|.||||++++++|+++++|||||++|++|+++++|++++++++
T Consensus 160 iadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~ 239 (546)
T 3rtk_A 160 IAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVI 239 (546)
T ss_dssp HHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHH
T ss_pred HHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHH
Confidence 99999999999999998887776555999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCce
Q 014061 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIAR 367 (431)
Q Consensus 288 ~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~ 367 (431)
+.|+|||||+++|+++||++|+.|+++|+++|+|||+|+||+.|+++|+|||++|||++++++.|++++++++++||+|+
T Consensus 240 ~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~ 319 (546)
T 3rtk_A 240 GAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKAR 319 (546)
T ss_dssp TTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEE
T ss_pred hcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCeEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhhcCCeEEEEeCcc
Q 014061 368 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVCYM 430 (431)
Q Consensus 368 ~V~i~~~~~~ii~g~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRla~l~g~~a~i~vGg~ 430 (431)
+|++++++|+++.||++++.++.|++||+.++++++|+||||+|+||||||+||+|+|.|||+
T Consensus 320 ~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~ 382 (546)
T 3rtk_A 320 KVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAA 382 (546)
T ss_dssp EEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCC
T ss_pred EEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCC
Confidence 999999999999999999999999999999999999999999999999999999999999996
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.7e-95 Score=773.13 Aligned_cols=382 Identities=46% Similarity=0.768 Sum_probs=335.2
Q ss_pred cchhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhc
Q 014061 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (431)
Q Consensus 49 ~~k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~ 127 (431)
|+|++.||.++|.+|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+|||||||++++|++|
T Consensus 2 ~~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 81 (545)
T 1iok_A 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRT 81 (545)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHG
T ss_pred CchhhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccCChHHHHHHHhhcCCChHHHHHH
Q 014061 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (431)
Q Consensus 128 ~~~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 207 (431)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++.++|.++|++|++++++++++
T Consensus 82 d~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~l 161 (545)
T 1iok_A 82 NDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQ 161 (545)
T ss_dssp GGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHH
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHhhhcCCceEEecCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeeccccCCHHhHHHHHHHHH
Q 014061 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (431)
Q Consensus 208 i~~Av~~vg~~g~I~i~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~I~~~~~l~~~le~i~ 287 (431)
+++|+.+++++|.|++++|++++||+++++||+|+++|.||||++++++|+.+++|||||++|++|+++++++++++++.
T Consensus 162 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~ 241 (545)
T 1iok_A 162 IAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVI 241 (545)
T ss_dssp HHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC---------
T ss_pred HHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCce
Q 014061 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIAR 367 (431)
Q Consensus 288 ~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~ 367 (431)
+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||++++++.|++++++++++||+|+
T Consensus 242 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~ 321 (545)
T 1iok_A 242 QSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAK 321 (545)
T ss_dssp --CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEE
T ss_pred hcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCeEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhhcCCeEEEEeCcc
Q 014061 368 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVCYM 430 (431)
Q Consensus 368 ~V~i~~~~~~ii~g~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRla~l~g~~a~i~vGg~ 430 (431)
+|++++++|++++||+++..+++|++|++.+++.++|+||||+|+||||||+|++++|.|||+
T Consensus 322 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~ 384 (545)
T 1iok_A 322 KVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGM 384 (545)
T ss_dssp EEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCS
T ss_pred EEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCC
Confidence 999999999999999999999999999999999999999999999999999999999999996
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=2.5e-94 Score=764.28 Aligned_cols=381 Identities=49% Similarity=0.766 Sum_probs=375.4
Q ss_pred cchhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhc
Q 014061 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (431)
Q Consensus 49 ~~k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~ 127 (431)
|+|++.||.++|.+|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+|||||||++++|++|
T Consensus 1 ~~k~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 80 (543)
T 1we3_A 1 MAKILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKT 80 (543)
T ss_dssp -CEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhh
Confidence 57999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccCChHHHHHHHhhcCCChHHHHHH
Q 014061 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (431)
Q Consensus 128 ~~~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 207 (431)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++.++|.++|++|++ +++++++
T Consensus 81 d~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~l 159 (543)
T 1we3_A 81 NDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKL 159 (543)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred heecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHhhhcCCceEEecCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeeccccCCHHhHHHHHHHHH
Q 014061 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (431)
Q Consensus 208 i~~Av~~vg~~g~I~i~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~I~~~~~l~~~le~i~ 287 (431)
++||+.+++++|.|++++|++++|++++++||+|+++|.||||++++++|+.+++|||||++|++|++++++++++|++.
T Consensus 160 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~ 239 (543)
T 1we3_A 160 IADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVA 239 (543)
T ss_dssp HHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCce
Q 014061 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIAR 367 (431)
Q Consensus 288 ~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~ 367 (431)
+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++|+++|+|||++|||++++++.|++++++++++||+|+
T Consensus 240 ~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~ 319 (543)
T 1we3_A 240 QTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAE 319 (543)
T ss_dssp TTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEE
T ss_pred hcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCeEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhhcCCeEEEEeCcc
Q 014061 368 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVCYM 430 (431)
Q Consensus 368 ~V~i~~~~~~ii~g~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRla~l~g~~a~i~vGg~ 430 (431)
.|++++++|++++||++++.+++|++||+.+++.++|+||||+|+||||||+|++++|.|||+
T Consensus 320 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~ 382 (543)
T 1we3_A 320 RVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAA 382 (543)
T ss_dssp EEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred EEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCC
Confidence 999999999999999999999999999999999999999999999999999999999999996
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1e-73 Score=610.49 Aligned_cols=347 Identities=22% Similarity=0.269 Sum_probs=289.3
Q ss_pred hhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhccc
Q 014061 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (431)
Q Consensus 51 k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~ 129 (431)
.+..+|.++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||+
T Consensus 12 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Akll~e~a~~qd~ 87 (590)
T 3p9d_C 12 QERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AKSMLELSRTQDE 87 (590)
T ss_dssp CCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HHTHHHHTTTHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HHHHHHHHHhhhh
Confidence 467789999999999999999999999999999999999 99999999999999999999998 9999999999999
Q ss_pred ccCCCcchHHHhHHHHHHhhhhh-hccCCChhhHHHHHHHHHHHHHHHHHccCcccC--ChHHHHHHHhhcCC------C
Q 014061 130 LAGDGTTTAVILAREMIKSGMLS-VSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAG------N 200 (431)
Q Consensus 130 ~vGDGTTt~vvLa~~Ll~~~~~l-i~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~l~~va~ts~~------~ 200 (431)
++||||||+||||++||+++.++ +++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||++ +
T Consensus 88 e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~ 167 (590)
T 3p9d_C 88 EVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHW 167 (590)
T ss_dssp HCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGG
T ss_pred hhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhccccccc
Confidence 99999999999999999999999 999999999999999999999999999999987 36899999998864 4
Q ss_pred hHHHHHHHHHHHHhhhcCCc----------------eEE--ecCCCceeeeEeeeceEEeccCCCCccccccccCeeEee
Q 014061 201 DEFIGNLIADAIIKIGADGV----------------ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFD 262 (431)
Q Consensus 201 ~~~l~~li~~Av~~vg~~g~----------------I~i--~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~ 262 (431)
+++|++|+++|+.++++++. |++ ..|++++|+ ++++||+|++++.+| +|+++++
T Consensus 168 ~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~-------~m~~~~e 239 (590)
T 3p9d_C 168 SEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHP-------KMSRHIE 239 (590)
T ss_dssp HHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCT-------TSCSCEE
T ss_pred HHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCC-------CCcceee
Confidence 79999999999999988653 333 469999998 999999999998887 3899999
Q ss_pred CceeEeeccc-------------cCCHHhHHHHH-----------HHHHhCCCCEEEEecCCchHHHHHHHHccccccee
Q 014061 263 NAKVLITDQK-------------ISTVKEIVPLL-----------EKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLN 318 (431)
Q Consensus 263 npkIll~d~~-------------I~~~~~l~~~l-----------e~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~ 318 (431)
|||||++|++ |++++++.+++ ++|.+.|++|||++++|+++|+++|+.++
T Consensus 240 n~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~------ 313 (590)
T 3p9d_C 240 NPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGG------ 313 (590)
T ss_dssp SCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTT------
T ss_pred eeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcc------
Confidence 9999999995 45566665554 68999999999999999999999999885
Q ss_pred eeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCC-ceEEE---EeCCeEEEEeCCCCHHH-------
Q 014061 319 VAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGI-ARKVT---VKSNSTTIVADPYTKAE------- 387 (431)
Q Consensus 319 v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~-a~~V~---i~~~~~~ii~g~~~~~~------- 387 (431)
|+ +||++++++|+|||++|||++++ +++++++++||+ |+.|+ +++++|++++||+++..
T Consensus 314 I~-----av~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~ 383 (590)
T 3p9d_C 314 CS-----VLRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHP 383 (590)
T ss_dssp CC-----CCCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEECEEECC-------------
T ss_pred ce-----eeccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCcccccccccc
Confidence 33 46799999999999999999999 799999999999 99997 57899999999999888
Q ss_pred -------------------HHHHHHHHHHHHhhcCCHHHHHHHHHHHHhhcCCeEEEEeCcc
Q 014061 388 -------------------IQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVCYM 430 (431)
Q Consensus 388 -------------------i~~ri~~l~~~i~~~~~~~~~~~l~eRla~l~g~~a~i~vGg~ 430 (431)
|+.|++||+.+++.++|+||++ +|+|+||+|+|.|||+
T Consensus 384 ~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~ 440 (590)
T 3p9d_C 384 QFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGG 440 (590)
T ss_dssp -------------------------------------------------CCCSCCCEEEECS
T ss_pred ccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCC
Confidence 9999999999999999999966 5899999999999996
No 6
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=5.1e-70 Score=580.54 Aligned_cols=330 Identities=20% Similarity=0.315 Sum_probs=300.9
Q ss_pred chhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhcc
Q 014061 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (431)
Q Consensus 50 ~k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~ 128 (431)
+|++.||.++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||
T Consensus 16 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 91 (559)
T 3p9d_A 16 GGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQQD 91 (559)
T ss_dssp SCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999 99999999999999999999998 999999999999
Q ss_pred cccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHc-cCcccCC--hHHHHHHHhhcCCC-----
Q 014061 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQ-KSFPVTG--RDDIKAVASISAGN----- 200 (431)
Q Consensus 129 ~~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~-~s~~v~~--~~~l~~va~ts~~~----- 200 (431)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ +++|++. .+.|.++|+||+++
T Consensus 92 ~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~ 171 (559)
T 3p9d_A 92 REIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGA 171 (559)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGT
T ss_pred HHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999 9999874 78999999999876
Q ss_pred -hHHHHHHHHHHHHhhhc-----CCc-----eEE--ecCCCceeeeEeeeceEEeccCCCCccccccccCeeEee--Cce
Q 014061 201 -DEFIGNLIADAIIKIGA-----DGV-----ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFD--NAK 265 (431)
Q Consensus 201 -~~~l~~li~~Av~~vg~-----~g~-----I~i--~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~--npk 265 (431)
+++|++|+++|+.++++ +|. |++ ..|++++|| ++++||+|+++|.||| |+.+++ |||
T Consensus 172 ~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ie~~n~k 243 (559)
T 3p9d_A 172 DSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQA-------MPKRIAGGNVK 243 (559)
T ss_dssp THHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTT-------SCSEECSSSBC
T ss_pred hhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCC-------cceeeccCCce
Confidence 79999999999999984 244 333 349999998 9999999999999998 677888 999
Q ss_pred eEeecccc-------------CCHHh-----------HHHHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeee
Q 014061 266 VLITDQKI-------------STVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAV 321 (431)
Q Consensus 266 Ill~d~~I-------------~~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~a 321 (431)
|+++|++| +++++ +.+++++|.+.|+||||++++|+++|+++|+.|+ |+|
T Consensus 244 Ill~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I~a 317 (559)
T 3p9d_A 244 IACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------IMG 317 (559)
T ss_dssp EEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------CEE
T ss_pred EEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------Cce
Confidence 99999986 44444 6789999999999999999999999999999996 356
Q ss_pred ecCCCCCCCchhhHHHHHHHhCCeEeecCCCccc-cCCCCCCCCCceEEE---EeCCeEEEEeCCC------------CH
Q 014061 322 VKCPGFGDGKKALLQDIALMTGADFLSGELGLTL-AGATSDQLGIARKVT---VKSNSTTIVADPY------------TK 385 (431)
Q Consensus 322 Vk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l-~~~~~~~LG~a~~V~---i~~~~~~ii~g~~------------~~ 385 (431)
| +++++++|+|||++|||+++++..++.+ +++++++||+|+.|+ +++++|+++.||+ ++
T Consensus 318 v-----~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te 392 (559)
T 3p9d_A 318 V-----RRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGAND 392 (559)
T ss_dssp E-----SSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEESCH
T ss_pred E-----ccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCH
Confidence 5 5788999999999999999998777775 899999999999998 5788888887654 45
Q ss_pred HHHHHHHHHHHHHHhhc
Q 014061 386 AEIQARIMQIKKDLAAT 402 (431)
Q Consensus 386 ~~i~~ri~~l~~~i~~~ 402 (431)
..++++.+.+.+.+...
T Consensus 393 ~~l~E~kr~l~DAL~~~ 409 (559)
T 3p9d_A 393 YSLDEMERSLHDSLSVV 409 (559)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 67899999999998764
No 7
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=4.9e-68 Score=560.59 Aligned_cols=323 Identities=20% Similarity=0.290 Sum_probs=295.0
Q ss_pred hhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-C--CceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhc
Q 014061 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-S--DKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (431)
Q Consensus 51 k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~--g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~ 127 (431)
.+..||.++|..|+.||+.|+++|+|||||+||||||++ + |+|+|||||+||||+|+++||. |||++++|++|
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~~q 78 (513)
T 3iyg_B 3 ADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSRVQ 78 (513)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHHHh
Confidence 456789999999999999999999999999999999999 8 9999999999999999999996 99999999999
Q ss_pred ccccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccC-----ChHHHHHHHhhcCC---
Q 014061 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-----GRDDIKAVASISAG--- 199 (431)
Q Consensus 128 ~~~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~-----~~~~l~~va~ts~~--- 199 (431)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||++
T Consensus 79 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~ 158 (513)
T 3iyg_B 79 DDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKL 158 (513)
T ss_pred hhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccc
Confidence 9999999999999999999999999999999999999999999999999999999987 57899999998764
Q ss_pred ---ChHHHHHHHHHHHHhhhcC---CceEEe--cCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeecc
Q 014061 200 ---NDEFIGNLIADAIIKIGAD---GVILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (431)
Q Consensus 200 ---~~~~l~~li~~Av~~vg~~---g~I~i~--~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~ 271 (431)
++++|++|++||+.+++++ +.|+++ .|++++|| ++++||+|+++|.|| |+.+++|||||++|+
T Consensus 159 ~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~~~ 229 (513)
T 3iyg_B 159 LTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIANT 229 (513)
T ss_pred cccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEEcC
Confidence 5689999999999999987 778774 69999998 999999999999987 788999999999998
Q ss_pred --------------ccCCHHhHHH-----------HHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCC
Q 014061 272 --------------KISTVKEIVP-----------LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (431)
Q Consensus 272 --------------~I~~~~~l~~-----------~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~ 326 (431)
+|++++++.+ +++++.+.|+||||++++|+++|+++|..+ +|+|||+|+
T Consensus 230 ~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~~~ 303 (513)
T 3iyg_B 230 GMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEHAD 303 (513)
T ss_pred CcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEecCC
Confidence 4667777654 789999999999999999999999999976 479999887
Q ss_pred CCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEE---EeCCeEEEEeCC------------CCHHHHHHH
Q 014061 327 FGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVT---VKSNSTTIVADP------------YTKAEIQAR 391 (431)
Q Consensus 327 ~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~---i~~~~~~ii~g~------------~~~~~i~~r 391 (431)
+.+|+|||++|||++++ +++++++++||+|++|+ +++++++++.|| +++..++++
T Consensus 304 -----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~ 373 (513)
T 3iyg_B 304 -----FVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEA 373 (513)
T ss_pred -----HHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHH
Confidence 57999999999999999 79999999999999998 556666666654 456788999
Q ss_pred HHHHHHHHhhc
Q 014061 392 IMQIKKDLAAT 402 (431)
Q Consensus 392 i~~l~~~i~~~ 402 (431)
.+.+.+.+...
T Consensus 374 kr~l~DAl~~~ 384 (513)
T 3iyg_B 374 ERSLHDALCVL 384 (513)
T ss_pred HHHHHHHHHHH
Confidence 99999999765
No 8
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2e-68 Score=567.38 Aligned_cols=325 Identities=23% Similarity=0.359 Sum_probs=301.1
Q ss_pred chhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhcc
Q 014061 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (431)
Q Consensus 50 ~k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~ 128 (431)
.+++.+|.++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||
T Consensus 15 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 90 (548)
T 1q3q_A 15 GTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AKMMVEVAKTQD 90 (548)
T ss_dssp TCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHHHH
T ss_pred CcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HHHHHHHHHhcC
Confidence 3678899999999999999999999999999999999999 99999999999999999999998 999999999999
Q ss_pred cccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccC--ChHHHHHHHhhcCC------C
Q 014061 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAG------N 200 (431)
Q Consensus 129 ~~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~l~~va~ts~~------~ 200 (431)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +.++|.++|+||++ +
T Consensus 91 ~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~ 170 (548)
T 1q3q_A 91 KEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESH 170 (548)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGG
T ss_pred CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccc
Confidence 999999999999999999999999999999999999999999999999999999987 48899999998754 4
Q ss_pred hHHHHHHHHHHHHhhhcC--C-------ceEEe--cCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEee
Q 014061 201 DEFIGNLIADAIIKIGAD--G-------VILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLIT 269 (431)
Q Consensus 201 ~~~l~~li~~Av~~vg~~--g-------~I~i~--~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~ 269 (431)
+++|+++++||+.+++++ | .|+++ +|++++|| ++++||+|+++|.||| |+.+++|||||++
T Consensus 171 ~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~ 242 (548)
T 1q3q_A 171 KELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPR-------MPKRVENAKIALI 242 (548)
T ss_dssp HHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTT-------SCSEESSEEEEEE
T ss_pred hHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCC-------CcceecCCEEEEE
Confidence 799999999999999876 4 67776 99999998 9999999999999998 4678999999999
Q ss_pred ccc-------------cCCHHhH-----------HHHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCC
Q 014061 270 DQK-------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (431)
Q Consensus 270 d~~-------------I~~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~ 325 (431)
|++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |+||+
T Consensus 243 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-- 314 (548)
T 1q3q_A 243 NEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVR-- 314 (548)
T ss_dssp CSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEEC--
T ss_pred ecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEc--
Confidence 999 7788875 789999999999999999999999999999985 57764
Q ss_pred CCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEe---CCeEEEEeCCC------------CHHHHHH
Q 014061 326 GFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPY------------TKAEIQA 390 (431)
Q Consensus 326 ~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~---~~~~~ii~g~~------------~~~~i~~ 390 (431)
++++++|+|||++|||++++ +++++++++||+|+.|++. ++++++++||+ ++..+++
T Consensus 315 ---~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E 386 (548)
T 1q3q_A 315 ---RVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDE 386 (548)
T ss_dssp ---SCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHH
T ss_pred ---cCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHH
Confidence 78899999999999999999 7999999999999999975 78888888765 4568999
Q ss_pred HHHHHHHHHhhc
Q 014061 391 RIMQIKKDLAAT 402 (431)
Q Consensus 391 ri~~l~~~i~~~ 402 (431)
+.+.+.+.+...
T Consensus 387 ~er~l~DAl~~~ 398 (548)
T 1q3q_A 387 VERALEDAVKVV 398 (548)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999765
No 9
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=4.6e-68 Score=564.55 Aligned_cols=326 Identities=21% Similarity=0.343 Sum_probs=294.5
Q ss_pred chhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhcc
Q 014061 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (431)
Q Consensus 50 ~k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~ 128 (431)
..+..+|.++|..|+.||+.|+++|||||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||
T Consensus 22 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 97 (553)
T 3ko1_A 22 GSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPA----AKLLVQIAKGQD 97 (553)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHH----HHHHHHHHHTCS
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChh----HHHHHHHhhCCc
Confidence 3577889999999999999999999999999999999999 99999999999999999999998 999999999999
Q ss_pred cccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccC--ChHHHHHHHhhcCCC------
Q 014061 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------ 200 (431)
Q Consensus 129 ~~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~l~~va~ts~~~------ 200 (431)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +++.|.++|+||+++
T Consensus 98 ~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~ 177 (553)
T 3ko1_A 98 EETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVAGA 177 (553)
T ss_dssp SSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCCTT
T ss_pred ccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhH
Confidence 999999999999999999999999999999999999999999999999999999987 789999999999875
Q ss_pred hHHHHHHHHHHHHhhhcC--Cc-------eEEe--cCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEee
Q 014061 201 DEFIGNLIADAIIKIGAD--GV-------ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLIT 269 (431)
Q Consensus 201 ~~~l~~li~~Av~~vg~~--g~-------I~i~--~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~ 269 (431)
+++|++|++||+.+++++ |. |+++ .|+++.|+ ++++||+|+++|.||| |+++++||||+++
T Consensus 178 ~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~ 249 (553)
T 3ko1_A 178 REYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPG-------MPKRLENAKIALI 249 (553)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTT-------SCSCCBSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCC-------CccccccceEEEe
Confidence 799999999999999986 66 7764 78898888 9999999999999998 6778999999999
Q ss_pred ccc-------------cCCHHh-----------HHHHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCC
Q 014061 270 DQK-------------ISTVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (431)
Q Consensus 270 d~~-------------I~~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~ 325 (431)
|++ |+++++ +.+++++|.+.|+||||++++|+++|+++|++++ |++|+
T Consensus 250 d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~g------I~~v~-- 321 (553)
T 3ko1_A 250 DASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKG------VLAVR-- 321 (553)
T ss_dssp CSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHT------CEEEC--
T ss_pred cCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcc------hhhhh--
Confidence 994 677776 5677899999999999999999999999999653 45665
Q ss_pred CCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEe---CCeEEEEeCCCC------------HHHHHH
Q 014061 326 GFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYT------------KAEIQA 390 (431)
Q Consensus 326 ~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~---~~~~~ii~g~~~------------~~~i~~ 390 (431)
++++++|+|||++|||++++ +++++++++||+|+.|++. +++++|+.||++ +..+++
T Consensus 322 ---~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E 393 (553)
T 3ko1_A 322 ---RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDE 393 (553)
T ss_dssp ---CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHH
T ss_pred ---hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHH
Confidence 66799999999999999999 7999999999999999975 777888877654 568899
Q ss_pred HHHHHHHHHhhcC
Q 014061 391 RIMQIKKDLAATD 403 (431)
Q Consensus 391 ri~~l~~~i~~~~ 403 (431)
+.+.+.+.++...
T Consensus 394 ~er~l~DAl~~~r 406 (553)
T 3ko1_A 394 TERALRDALGTVA 406 (553)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999997653
No 10
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.8e-68 Score=565.92 Aligned_cols=323 Identities=23% Similarity=0.347 Sum_probs=296.9
Q ss_pred hhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhccc
Q 014061 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (431)
Q Consensus 51 k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~ 129 (431)
.++.+|.++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||+
T Consensus 15 ~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~ 90 (545)
T 1a6d_A 15 TQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----AKMIVEVSKAQDT 90 (545)
T ss_dssp --CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----HHHHHGGGGCTTT
T ss_pred chhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----HHHHHHHHHhcCC
Confidence 568899999999999999999999999999999999999 99999999999999999999998 9999999999999
Q ss_pred ccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccC-ChHHHHHHHhhcC------CChH
Q 014061 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-GRDDIKAVASISA------GNDE 202 (431)
Q Consensus 130 ~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~-~~~~l~~va~ts~------~~~~ 202 (431)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++| + +.+.|.++|+||+ ++++
T Consensus 91 e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~ 169 (545)
T 1a6d_A 91 AVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSND 169 (545)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHH
T ss_pred EECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccHH
Confidence 999999999999999999999999999999999999999999999999999999 7 7899999999875 3579
Q ss_pred HHHHHHHHHHHhhhcC---------CceEEe--cCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeecc
Q 014061 203 FIGNLIADAIIKIGAD---------GVILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (431)
Q Consensus 203 ~l~~li~~Av~~vg~~---------g~I~i~--~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~ 271 (431)
+|++|++||+.+++++ +.|+++ +|++++|| ++++||+|+++|.||| |+.+++|||||++|+
T Consensus 170 ~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~ 241 (545)
T 1a6d_A 170 FLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSK-------MPDVVKNAKIALIDS 241 (545)
T ss_dssp HHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTT-------SCSEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCC-------CcceecCCEEEEEec
Confidence 9999999999999876 368776 99999998 9999999999999998 467899999999999
Q ss_pred c-------------cCCHHhH-----------HHHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCCC
Q 014061 272 K-------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (431)
Q Consensus 272 ~-------------I~~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~ 327 (431)
+ |++++++ .+++++|.+.|+||||++++|+++|+++|+.|+ |+||+
T Consensus 242 ~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~---- 311 (545)
T 1a6d_A 242 ALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR---- 311 (545)
T ss_dssp CBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC----
T ss_pred CCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec----
Confidence 9 6777765 789999999999999999999999999999985 57774
Q ss_pred CCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEe---CCeEEEEeCCC------------CHHHHHHHH
Q 014061 328 GDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPY------------TKAEIQARI 392 (431)
Q Consensus 328 g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~---~~~~~ii~g~~------------~~~~i~~ri 392 (431)
++++++|+|||++|||++++ +++++++++||+|+.|++. ++++++++||+ ++..++++.
T Consensus 312 -~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~k 385 (545)
T 1a6d_A 312 -RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVE 385 (545)
T ss_dssp -SCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHH
T ss_pred -cCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHH
Confidence 78899999999999999999 7999999999999999975 67777776654 556899999
Q ss_pred HHHHHHHhhc
Q 014061 393 MQIKKDLAAT 402 (431)
Q Consensus 393 ~~l~~~i~~~ 402 (431)
+.+.+.+...
T Consensus 386 r~l~DAl~~~ 395 (545)
T 1a6d_A 386 RALNDAIRVV 395 (545)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999765
No 11
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=5.1e-68 Score=563.91 Aligned_cols=324 Identities=22% Similarity=0.321 Sum_probs=294.2
Q ss_pred hhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhccc
Q 014061 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (431)
Q Consensus 51 k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~ 129 (431)
.++.+|.++|..|+.||+.|+++|+|||||+||||||++ +|+++|||||+||||+|+++||+ |||++++|++||+
T Consensus 14 ~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~ 89 (543)
T 1a6d_B 14 TKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----AKMMVEVSKTQDS 89 (543)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----HHHHHHHHTCTTC
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----HHHHHHHHHhcCC
Confidence 567889999999999999999999999999999999999 99999999999999999999998 9999999999999
Q ss_pred ccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccCC--hHHHHHHHhhcC------CCh
Q 014061 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG--RDDIKAVASISA------GND 201 (431)
Q Consensus 130 ~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~--~~~l~~va~ts~------~~~ 201 (431)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. .+.|.++|+||+ +++
T Consensus 90 e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~ 169 (543)
T 1a6d_B 90 FVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAK 169 (543)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGH
T ss_pred EECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccH
Confidence 999999999999999999999999999999999999999999999999999999874 789999999774 357
Q ss_pred HHHHHHHHHHHHhhhcC--Cc-------eEEe--cCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeec
Q 014061 202 EFIGNLIADAIIKIGAD--GV-------ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (431)
Q Consensus 202 ~~l~~li~~Av~~vg~~--g~-------I~i~--~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d 270 (431)
++|++|+++|+.+++++ |. |+++ +|++++|+ ++++||+|+++|.||| |+.+++|||||++|
T Consensus 170 ~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~ 241 (543)
T 1a6d_B 170 DKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPG-------MPDVVKDAKIALLD 241 (543)
T ss_dssp HHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTT-------SCSEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCC-------CcceecCCeEEEEe
Confidence 99999999999999876 63 7775 99999998 9999999999999998 56789999999999
Q ss_pred cc-------------cCCHHhH-----------HHHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCC
Q 014061 271 QK-------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (431)
Q Consensus 271 ~~-------------I~~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~ 326 (431)
++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |+||+
T Consensus 242 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~--- 312 (543)
T 1a6d_B 242 APLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAVR--- 312 (543)
T ss_dssp SCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEEC---
T ss_pred cccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEec---
Confidence 99 7777765 789999999999999999999999999999985 57764
Q ss_pred CCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEe---CCeEEEEeCCC------------CHHHHHHH
Q 014061 327 FGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPY------------TKAEIQAR 391 (431)
Q Consensus 327 ~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~---~~~~~ii~g~~------------~~~~i~~r 391 (431)
++++++|+|||++|||++++ +++++++++||+|+.|++. ++++++++||+ ++..++++
T Consensus 313 --~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~ 385 (543)
T 1a6d_B 313 --RVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEM 385 (543)
T ss_dssp --SCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHH
T ss_pred --cCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHH
Confidence 78899999999999999999 7999999999999999975 77777777654 56789999
Q ss_pred HHHHHHHHhhc
Q 014061 392 IMQIKKDLAAT 402 (431)
Q Consensus 392 i~~l~~~i~~~ 402 (431)
.+.+.+.+...
T Consensus 386 er~l~DAl~~~ 396 (543)
T 1a6d_B 386 ERSITDSLHVV 396 (543)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999765
No 12
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=7e-68 Score=562.58 Aligned_cols=325 Identities=23% Similarity=0.341 Sum_probs=297.7
Q ss_pred hhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhccc
Q 014061 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (431)
Q Consensus 51 k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~ 129 (431)
.+..+|.++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||+
T Consensus 12 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~ 87 (543)
T 3ruv_A 12 MKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLIEVAKTQEK 87 (543)
T ss_dssp EEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHHHHHHHHHH
T ss_pred cchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHh
Confidence 556789999999999999999999999999999999999 99999999999999999999998 9999999999999
Q ss_pred ccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccC--ChHHHHHHHhhcCCC------h
Q 014061 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------D 201 (431)
Q Consensus 130 ~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~l~~va~ts~~~------~ 201 (431)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++ +
T Consensus 88 e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~ 167 (543)
T 3ruv_A 88 EVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAK 167 (543)
T ss_dssp HTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCC
T ss_pred hhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchhH
Confidence 99999999999999999999999999999999999999999999999999999987 789999999999864 7
Q ss_pred HHHHHHHHHHHHhhhcC-Cc-----eEEe--cCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeeccc-
Q 014061 202 EFIGNLIADAIIKIGAD-GV-----ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK- 272 (431)
Q Consensus 202 ~~l~~li~~Av~~vg~~-g~-----I~i~--~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~- 272 (431)
++|+++++||+.+++++ |. |+++ .|+++.|+ ++++||+|+++|.||| |+++++||||+++|++
T Consensus 168 ~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~~n~kIll~~~~L 239 (543)
T 3ruv_A 168 EKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQ-------MPKKVTDAKIALLNCAI 239 (543)
T ss_dssp HHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTT-------SCSEEEEEEEEEESSCB
T ss_pred HHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCcc-------ccccccCcEEEEEcccc
Confidence 99999999999999987 75 7664 78898888 9999999999999998 6788999999999995
Q ss_pred ------------cCCHHh-----------HHHHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCCCCC
Q 014061 273 ------------ISTVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGD 329 (431)
Q Consensus 273 ------------I~~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~g~ 329 (431)
|+++++ +.+++++|.+.|+||||++++|+++|+++|++++ |++|+ +
T Consensus 240 e~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~g------I~~v~-----~ 308 (543)
T 3ruv_A 240 EIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEG------IVAAR-----R 308 (543)
T ss_dssp SCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTT------CEEEC-----S
T ss_pred cccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcC------cEEEe-----e
Confidence 566665 5678899999999999999999999999999653 45665 6
Q ss_pred CchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEe---CCeEEEEeCCCC------------HHHHHHHHHH
Q 014061 330 GKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYT------------KAEIQARIMQ 394 (431)
Q Consensus 330 ~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~---~~~~~ii~g~~~------------~~~i~~ri~~ 394 (431)
+++++|+|||++|||++++ +++++++++||+|++|++. +++++++.||++ +..++++.+.
T Consensus 309 v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~ 383 (543)
T 3ruv_A 309 VKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARA 383 (543)
T ss_dssp CCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHH
Confidence 6799999999999999999 7999999999999999976 788888888764 5678999999
Q ss_pred HHHHHhhcC
Q 014061 395 IKKDLAATD 403 (431)
Q Consensus 395 l~~~i~~~~ 403 (431)
+.+.++...
T Consensus 384 l~DAl~~~r 392 (543)
T 3ruv_A 384 VDDAVGVVG 392 (543)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999997653
No 13
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-67 Score=556.62 Aligned_cols=327 Identities=18% Similarity=0.266 Sum_probs=294.2
Q ss_pred hhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhcccc
Q 014061 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (431)
Q Consensus 52 ~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~~ 130 (431)
+...|.+++..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||++
T Consensus 5 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~ 80 (515)
T 3iyg_H 5 DSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDAE 80 (515)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhce
Confidence 45568999999999999999999999999999999999 99999999999999999999999 99999999999999
Q ss_pred cCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccC--C----hHHHHHHHhhcCC-----
Q 014061 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--G----RDDIKAVASISAG----- 199 (431)
Q Consensus 131 vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~----~~~l~~va~ts~~----- 199 (431)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ + ++.|.++|+||++
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s 160 (515)
T 3iyg_H 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLIS 160 (515)
T ss_pred eCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999999999999999999999999999984 5 5677999999874
Q ss_pred -ChHHHHHHHHHHHHhhhcC---CceEEe--cCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeeccc-
Q 014061 200 -NDEFIGNLIADAIIKIGAD---GVILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK- 272 (431)
Q Consensus 200 -~~~~l~~li~~Av~~vg~~---g~I~i~--~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~- 272 (431)
++++|++++++|+.+++.+ +.|+++ .|+++.|+ ++++||+|+++|.||||++ ||.+++|||||++|++
T Consensus 161 ~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~----~p~~~en~kIll~~~~L 235 (515)
T 3iyg_H 161 QQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEM----QPKKYHNPMIALLNVEL 235 (515)
T ss_pred ccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCccccc----CCccccccEEEEEcccc
Confidence 5789999999999999876 777774 68899998 9999999999999999976 4558999999999995
Q ss_pred ------------cCCHHhH-----------HHHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCCCCC
Q 014061 273 ------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGD 329 (431)
Q Consensus 273 ------------I~~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~g~ 329 (431)
|++++++ .++++++.+.|+||||++++|++.++++|.+++ + ++ +++
T Consensus 236 e~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~g---I---~~-----v~~ 304 (515)
T 3iyg_H 236 ELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRD---M---FC-----AGR 304 (515)
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcC---C---cc-----ccc
Confidence 6777775 567999999999999999999999999887543 3 33 468
Q ss_pred CchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEe---CCeEEEEeCCC------------CHHHHHHHHHH
Q 014061 330 GKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPY------------TKAEIQARIMQ 394 (431)
Q Consensus 330 ~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~---~~~~~ii~g~~------------~~~~i~~ri~~ 394 (431)
+++++|+|||++|||++++ +++++++++||+|+.|++. ++++++++||+ ++..++++.+.
T Consensus 305 ~~k~~leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~ 379 (515)
T 3iyg_H 305 VPEEDLKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERS 379 (515)
T ss_pred ccHHHHHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHH
Confidence 8899999999999999999 6999999999999999865 67777777654 45678999999
Q ss_pred HHHHHhhcC
Q 014061 395 IKKDLAATD 403 (431)
Q Consensus 395 l~~~i~~~~ 403 (431)
+.+.++...
T Consensus 380 i~DAl~~~r 388 (515)
T 3iyg_H 380 LHDAIMIVR 388 (515)
T ss_pred HHHHHHHHH
Confidence 999997653
No 14
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=5.5e-68 Score=561.68 Aligned_cols=326 Identities=21% Similarity=0.305 Sum_probs=298.8
Q ss_pred chhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhcc
Q 014061 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (431)
Q Consensus 50 ~k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~ 128 (431)
.|+..||.++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 11 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd 86 (528)
T 3p9d_D 11 FKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAAQD 86 (528)
T ss_dssp SCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHHHH
T ss_pred cchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHHhh
Confidence 4788999999999999999999999999999999999999 99999999999999999999999 999999999999
Q ss_pred cccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccC--ChHHHHHHHhhcCCC------
Q 014061 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------ 200 (431)
Q Consensus 129 ~~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~l~~va~ts~~~------ 200 (431)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +.+.|.++|+||+++
T Consensus 87 ~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~ 166 (528)
T 3p9d_D 87 SEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQY 166 (528)
T ss_dssp HHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTT
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchh
Confidence 999999999999999999999999999999999999999999999999999999988 789999999999875
Q ss_pred hHHHHHHHHHHHHhhhc--CCceEEe-------cCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeecc
Q 014061 201 DEFIGNLIADAIIKIGA--DGVILIE-------SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (431)
Q Consensus 201 ~~~l~~li~~Av~~vg~--~g~I~i~-------~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~ 271 (431)
+++|++|++||+.++++ +|.|.++ .|++++|| ++++||+|+++|.|||| |+++++||||+++|+
T Consensus 167 ~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~~ 239 (528)
T 3p9d_D 167 SSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQF 239 (528)
T ss_dssp HHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEECC
T ss_pred HHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEEec
Confidence 79999999999999987 4655443 49999998 99999999999999987 889999999999999
Q ss_pred ccC-------------CHHh-----------HHHHHHHHHhCCCCEEEEecCC-----chHHHHHHHHcccccceeeeee
Q 014061 272 KIS-------------TVKE-----------IVPLLEKTTQLSVPLLIIAEDI-----SSQVLETLVMNKIRGLLNVAVV 322 (431)
Q Consensus 272 ~I~-------------~~~~-----------l~~~le~i~~~g~~lvIi~~~I-----~~~aL~~L~~n~l~G~~~v~aV 322 (431)
+|+ ++++ +.++++++.+.|+||||++++| ++.|+++|..|+ |+||
T Consensus 240 ~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~av 313 (528)
T 3p9d_D 240 QISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IMVV 313 (528)
T ss_dssp CSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CCEE
T ss_pred cccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cEEE
Confidence 875 4443 6889999999999999999999 999999999875 6777
Q ss_pred cCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEe------------------CCeEEEEeCCCC
Q 014061 323 KCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK------------------SNSTTIVADPYT 384 (431)
Q Consensus 323 k~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~------------------~~~~~ii~g~~~ 384 (431)
| ++++++|+|||++|||++++ +++++++++||+|+.|++. ...+||+-++++
T Consensus 314 ~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~t 383 (528)
T 3p9d_D 314 K-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGAN 383 (528)
T ss_dssp E-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSS
T ss_pred E-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCC
Confidence 7 66799999999999999999 6899999999999999853 124577777778
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 014061 385 KAEIQARIMQIKKDLAAT 402 (431)
Q Consensus 385 ~~~i~~ri~~l~~~i~~~ 402 (431)
+..++++.+.+.+.+...
T Consensus 384 e~~l~E~kr~i~DAl~~~ 401 (528)
T 3p9d_D 384 NMIIDETERSLHDALCVI 401 (528)
T ss_dssp TTHHHHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 889999999999999765
No 15
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.1e-67 Score=551.47 Aligned_cols=323 Identities=21% Similarity=0.293 Sum_probs=290.9
Q ss_pred hhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhccc
Q 014061 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (431)
Q Consensus 51 k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~ 129 (431)
++..+|.++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||+
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~ 79 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQDI 79 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhhh
Confidence 455678999999999999999999999999999999999 99999999999999999999999 9999999999999
Q ss_pred ccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccC--ChHHHHHHHhhcCCCh------
Q 014061 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGND------ 201 (431)
Q Consensus 130 ~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~l~~va~ts~~~~------ 201 (431)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||++++
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~ 159 (518)
T 3iyg_D 80 EAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYS 159 (518)
T ss_pred hhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhH
Confidence 99999999999999999999999999999999999999999999999999999988 7899999999999875
Q ss_pred HHHHHHHHHHHHhhhc---CCc-----eEEe--cCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeecc
Q 014061 202 EFIGNLIADAIIKIGA---DGV-----ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (431)
Q Consensus 202 ~~l~~li~~Av~~vg~---~g~-----I~i~--~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~ 271 (431)
++|++|++||+.++++ +|. |+++ .|++..|+ ++++||+|+++|.| . ||..++||+|+++++
T Consensus 160 ~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~ 230 (518)
T 3iyg_D 160 SLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQF 230 (518)
T ss_pred HHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEEe
Confidence 8999999999999985 554 6664 78899888 99999999999988 2 666788999999998
Q ss_pred cc-------------CCHH-----------hHHHHHHHHHhCCCCEEEE-----ecCCchHHHHHHHHcccccceeeeee
Q 014061 272 KI-------------STVK-----------EIVPLLEKTTQLSVPLLII-----AEDISSQVLETLVMNKIRGLLNVAVV 322 (431)
Q Consensus 272 ~I-------------~~~~-----------~l~~~le~i~~~g~~lvIi-----~~~I~~~aL~~L~~n~l~G~~~v~aV 322 (431)
++ ++++ ++.++++++.+.|+||||+ +++|+++|+++|+.|+ |+||
T Consensus 231 ~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~------I~av 304 (518)
T 3iyg_D 231 CLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMK------IMVV 304 (518)
T ss_pred eccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcC------cEEE
Confidence 75 4444 4678999999999999999 8999999999999874 7999
Q ss_pred cCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEe---C-CeEEEEeCCC-------------CH
Q 014061 323 KCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---S-NSTTIVADPY-------------TK 385 (431)
Q Consensus 323 k~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~---~-~~~~ii~g~~-------------~~ 385 (431)
|+|+ +.+|+|||++|||++++ +++++++++||+|+.|++. + ++++++++|+ ++
T Consensus 305 ~~~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te 374 (518)
T 3iyg_D 305 KDIE-----REDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNK 374 (518)
T ss_pred ecCC-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCH
Confidence 9887 67999999999999999 6999999999999999864 3 4666776654 35
Q ss_pred HHHHHHHHHHHHHHhhc
Q 014061 386 AEIQARIMQIKKDLAAT 402 (431)
Q Consensus 386 ~~i~~ri~~l~~~i~~~ 402 (431)
..++++.+.+.+.+...
T Consensus 375 ~~l~E~kr~l~DAl~~~ 391 (518)
T 3iyg_D 375 LVIEEAERSIHDALCVI 391 (518)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 67888888888888764
No 16
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.4e-66 Score=547.50 Aligned_cols=329 Identities=23% Similarity=0.290 Sum_probs=295.6
Q ss_pred hhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhccc
Q 014061 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (431)
Q Consensus 51 k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~ 129 (431)
.+..+|.++|..|+.||+.|+++|+|||||+||||||++ +|+++|||||+||||+|+++||+ |||++++|++||+
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~ 78 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQDK 78 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhhh
Confidence 356789999999999999999999999999999999999 99999999999999999999998 9999999999999
Q ss_pred ccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHc-cCcccC--ChHHHHHHHhhcCC------C
Q 014061 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQ-KSFPVT--GRDDIKAVASISAG------N 200 (431)
Q Consensus 130 ~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~-~s~~v~--~~~~l~~va~ts~~------~ 200 (431)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++ +++.|.++|+||++ +
T Consensus 79 e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~ 158 (529)
T 3iyg_A 79 EVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGIN 158 (529)
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCccccc
Confidence 99999999999999999999999999999999999999999999999999 899987 68999999999975 4
Q ss_pred hHHHHHHHHHHHHhhh---cCC-----c--eEE--ecCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEe
Q 014061 201 DEFIGNLIADAIIKIG---ADG-----V--ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (431)
Q Consensus 201 ~~~l~~li~~Av~~vg---~~g-----~--I~i--~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll 268 (431)
+++|++|++||+.+++ ++| . |++ ..|+++.|| ++++||+|+++|.||| |+..++||||++
T Consensus 159 ~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll 230 (529)
T 3iyg_A 159 GDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQG-------MPKRIVNAKIAC 230 (529)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCccccc-------CCcccCCceEEE
Confidence 7999999999999997 344 2 555 589999998 9999999999999998 677899999999
Q ss_pred ecccc-------------CCHHh-----------HHHHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecC
Q 014061 269 TDQKI-------------STVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKC 324 (431)
Q Consensus 269 ~d~~I-------------~~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~ 324 (431)
+|+++ +++++ +.+++++|.+.|+||||++++|+++|+++|+.|+ |+|||
T Consensus 231 l~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~- 303 (529)
T 3iyg_A 231 LDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVR- 303 (529)
T ss_pred ecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Cceec-
Confidence 99974 34433 5678999999999999999999999999999985 57776
Q ss_pred CCCCCCchhhHHHHHHHhCCeEeecCCCcc-ccCCCCCCCCCceEEE---EeCCeEEEEeCCCC------------HHHH
Q 014061 325 PGFGDGKKALLQDIALMTGADFLSGELGLT-LAGATSDQLGIARKVT---VKSNSTTIVADPYT------------KAEI 388 (431)
Q Consensus 325 ~~~g~~r~~~LedIa~~TGa~ii~~~~~~~-l~~~~~~~LG~a~~V~---i~~~~~~ii~g~~~------------~~~i 388 (431)
++++++|+|||++|||+++++..+++ .+++++++||+|+.|+ +++++++++.||++ +..+
T Consensus 304 ----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l 379 (529)
T 3iyg_A 304 ----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMC 379 (529)
T ss_pred ----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHH
Confidence 67899999999999999999766655 3567789999999998 77888888877654 5678
Q ss_pred HHHHHHHHHHHhhc
Q 014061 389 QARIMQIKKDLAAT 402 (431)
Q Consensus 389 ~~ri~~l~~~i~~~ 402 (431)
++..+.+.+.+...
T Consensus 380 ~E~er~l~Dal~v~ 393 (529)
T 3iyg_A 380 DEMERSLHDALCVV 393 (529)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 17
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.3e-66 Score=544.88 Aligned_cols=325 Identities=20% Similarity=0.342 Sum_probs=290.0
Q ss_pred hhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhccc
Q 014061 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (431)
Q Consensus 51 k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~ 129 (431)
++..||.++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||+
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~qd~ 78 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQDD 78 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHhhh
Confidence 456789999999999999999999999999999999999 99999999999999999999998 9999999999999
Q ss_pred ccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccCC----hHHHHHHHhhcCCC-----
Q 014061 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG----RDDIKAVASISAGN----- 200 (431)
Q Consensus 130 ~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~----~~~l~~va~ts~~~----- 200 (431)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. ++.|.++|+||+++
T Consensus 79 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~ 158 (515)
T 3iyg_E 79 EIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNS 158 (515)
T ss_pred hhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhH
Confidence 999999999999999999999999999999999999999999999999999988753 68999999999875
Q ss_pred -hHHHHHHHHHHHHhhhcC-------CceEE--ecCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeec
Q 014061 201 -DEFIGNLIADAIIKIGAD-------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (431)
Q Consensus 201 -~~~l~~li~~Av~~vg~~-------g~I~i--~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d 270 (431)
.+.|+++++||+..+.+. +.|++ ..|++++|+ ++++||+|+++|.|||| +..++||+|++++
T Consensus 159 ~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m-------~~~~~~~kIall~ 230 (515)
T 3iyg_E 159 CHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQM-------PKQVEDAKIAILT 230 (515)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEecccccccc-------cccCCCceEEEEc
Confidence 478999999999998652 23555 479999998 99999999999999985 4556777887777
Q ss_pred cc-------------cCCHHhH-----------HHHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCC
Q 014061 271 QK-------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (431)
Q Consensus 271 ~~-------------I~~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~ 326 (431)
++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|++ ++|+
T Consensus 231 ~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I------~~v~--- 301 (515)
T 3iyg_E 231 CPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDL------PAVR--- 301 (515)
T ss_pred CccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCC------EEEe---
Confidence 65 5666665 6789999999999999999999999999999874 5555
Q ss_pred CCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEE-----eCCeEEEEeCCCC------------HHHHH
Q 014061 327 FGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV-----KSNSTTIVADPYT------------KAEIQ 389 (431)
Q Consensus 327 ~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i-----~~~~~~ii~g~~~------------~~~i~ 389 (431)
++++++|+|||++|||++++ +++++++++||+|++|++ +++++++++||++ +..++
T Consensus 302 --~v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~ 374 (515)
T 3iyg_E 302 --WVGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIE 374 (515)
T ss_pred --ccCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHH
Confidence 44599999999999999999 799999999999999997 5578888877654 55788
Q ss_pred HHHHHHHHHHhhcC
Q 014061 390 ARIMQIKKDLAATD 403 (431)
Q Consensus 390 ~ri~~l~~~i~~~~ 403 (431)
++.+.+.+.+....
T Consensus 375 E~kr~i~DAl~~~r 388 (515)
T 3iyg_E 375 EAKRSLHDALCVIR 388 (515)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887653
No 18
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=4.3e-67 Score=557.03 Aligned_cols=326 Identities=19% Similarity=0.281 Sum_probs=292.5
Q ss_pred hhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhccc
Q 014061 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (431)
Q Consensus 51 k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~ 129 (431)
.+..+|.+++..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||+
T Consensus 17 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~ 92 (550)
T 3p9d_G 17 TDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTLVDISRAQDA 92 (550)
T ss_dssp CCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHHHHHHHHHHT
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhh
Confidence 466789999999999999999999999999999999999 99999999999999999999998 9999999999999
Q ss_pred ccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccCC-----hHHHHHHHhhcCC-----
Q 014061 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAG----- 199 (431)
Q Consensus 130 ~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~-----~~~l~~va~ts~~----- 199 (431)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. .+.|.++|+||++
T Consensus 93 e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~ 172 (550)
T 3p9d_G 93 EVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIH 172 (550)
T ss_dssp TTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTG
T ss_pred hhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999999863 6789999999864
Q ss_pred -ChHHHHHHHHHHHHhhhc-C------CceEEecCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeecc
Q 014061 200 -NDEFIGNLIADAIIKIGA-D------GVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (431)
Q Consensus 200 -~~~~l~~li~~Av~~vg~-~------g~I~i~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~ 271 (431)
++++|++|++||+.++++ + +++++. |++++|| ++++||+|+++|.||||.+ |+..++|||||++|+
T Consensus 173 ~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~-Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll~~~ 246 (550)
T 3p9d_G 173 NNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIP-GGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILSLNV 246 (550)
T ss_dssp GGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCC-SSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEEECS
T ss_pred ccHhHHHHHHHHHHHHhCccccCchheeEEEec-CCCccce-eEEeeEEEecccccccccc----CcccccCceEEEecc
Confidence 479999999999999984 3 445554 8999999 9999999999999999976 555699999999999
Q ss_pred c-------------cCCHHhHHH-----------HHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCCC
Q 014061 272 K-------------ISTVKEIVP-----------LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (431)
Q Consensus 272 ~-------------I~~~~~l~~-----------~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~ 327 (431)
+ |++++++.+ ++++|++.|++|||++++|++.++++|..++ |++ +
T Consensus 247 ~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~g------I~~-----v 315 (550)
T 3p9d_G 247 ELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRN------IFC-----A 315 (550)
T ss_dssp CCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGT------CEE-----E
T ss_pred ccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcC------Ccc-----c
Confidence 8 456665544 6789999999999999999999999887553 344 4
Q ss_pred CCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEE---eCCeEEEEeCC------------CCHHHHHHHH
Q 014061 328 GDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADP------------YTKAEIQARI 392 (431)
Q Consensus 328 g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i---~~~~~~ii~g~------------~~~~~i~~ri 392 (431)
+++++++|+|||++|||++++ +++++++++||+|+.|++ ++++++++.|| ++...++++.
T Consensus 316 ~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~k 390 (550)
T 3p9d_G 316 GRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVE 390 (550)
T ss_dssp ECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHH
T ss_pred cCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHH
Confidence 688899999999999999999 799999999999999986 57788888876 4567899999
Q ss_pred HHHHHHHhhc
Q 014061 393 MQIKKDLAAT 402 (431)
Q Consensus 393 ~~l~~~i~~~ 402 (431)
+.+.+.|+..
T Consensus 391 r~l~DAl~~~ 400 (550)
T 3p9d_G 391 RSLHDAIMIV 400 (550)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhHHHHH
Confidence 9999999765
No 19
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=3.8e-67 Score=555.59 Aligned_cols=324 Identities=19% Similarity=0.299 Sum_probs=290.4
Q ss_pred chhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec--CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhc
Q 014061 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE--SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (431)
Q Consensus 50 ~k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~--~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~ 127 (431)
.+++.||.++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||. |||++++|++|
T Consensus 9 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~~q 84 (527)
T 3p9d_B 9 QVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISKVQ 84 (527)
T ss_dssp CEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHHHh
Confidence 4678899999999999999999999999999999999998 79999999999999999999996 99999999999
Q ss_pred ccccCCCcchHHHhHHHHHHhhhhhhcc-CCChhhHHHHHHHHHHHHHHHHHccCcccCC-----hHHHHHHHhhcCCC-
Q 014061 128 NDLAGDGTTTAVILAREMIKSGMLSVSF-GANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAGN- 200 (431)
Q Consensus 128 ~~~vGDGTTt~vvLa~~Ll~~~~~li~~-G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~-----~~~l~~va~ts~~~- 200 (431)
|+++||||||+||||++||+++.+++++ |+||+.|++||++|++.++++|+++++++++ +++|.++|+||+++
T Consensus 85 d~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK 164 (527)
T 3p9d_B 85 DDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSK 164 (527)
T ss_dssp HHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred HhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccC
Confidence 9999999999999999999999999999 9999999999999999999999999999985 78999999999886
Q ss_pred -----hHHHHHHHHHHHHhhhcCC---ceEEe--cCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeec
Q 014061 201 -----DEFIGNLIADAIIKIGADG---VILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (431)
Q Consensus 201 -----~~~l~~li~~Av~~vg~~g---~I~i~--~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d 270 (431)
+++|++|++||+.+++++| .|+++ .|+++.|+ ++++||+||++|.||| |..++||||++++
T Consensus 165 ~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~~~~n~kIlll~ 235 (527)
T 3p9d_B 165 ILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PKRIENAKILIAN 235 (527)
T ss_dssp GGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CSCCSSCEEEEEC
T ss_pred cccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC--------CeeeecceEEEec
Confidence 7899999999999999987 77775 69999998 9999999999999996 3356899999998
Q ss_pred ccc--------------CCHHhH-----------HHHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCC
Q 014061 271 QKI--------------STVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (431)
Q Consensus 271 ~~I--------------~~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~ 325 (431)
++| ++++++ .+.+++|.+.|+||||++++|++.|+++|..|+ |+||++|
T Consensus 236 ~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~~ 309 (527)
T 3p9d_B 236 TTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIEHA 309 (527)
T ss_dssp SCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCCC
T ss_pred cccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEecC
Confidence 763 445554 678999999999999999999999999999985 6888765
Q ss_pred CCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEE---EeCCeEEEEe------------CCCCHHHHHH
Q 014061 326 GFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVT---VKSNSTTIVA------------DPYTKAEIQA 390 (431)
Q Consensus 326 ~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~---i~~~~~~ii~------------g~~~~~~i~~ 390 (431)
+ +.+|+|||++|||++++ +++++++++||+|+.|+ +++++++++. +++++..+++
T Consensus 310 ~-----~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E 379 (527)
T 3p9d_B 310 D-----FEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDE 379 (527)
T ss_dssp H-----HHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHH
T ss_pred C-----HHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHH
Confidence 5 78899999999999999 68999999999999998 4455544444 4556678899
Q ss_pred HHHHHHHHHhhc
Q 014061 391 RIMQIKKDLAAT 402 (431)
Q Consensus 391 ri~~l~~~i~~~ 402 (431)
+.+.+.+.++..
T Consensus 380 ~kr~i~DAl~~~ 391 (527)
T 3p9d_B 380 AERSLHDALSVL 391 (527)
T ss_dssp HHTHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 20
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=5.6e-66 Score=549.71 Aligned_cols=346 Identities=21% Similarity=0.336 Sum_probs=293.4
Q ss_pred eccccchhhhHHHhhc-chhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCc
Q 014061 34 LWRNQSRKMVAVVRAG-PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDT 111 (431)
Q Consensus 34 ~~~~~~~~~~~~~~~~-~k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP 111 (431)
..+++++|++ +++-- .+++.+|.++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||
T Consensus 21 ~~~~~~~~~~-~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP 99 (562)
T 3p9d_E 21 AQDEMGRPFI-IVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNE 99 (562)
T ss_dssp ---------C-CCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSH
T ss_pred HHHhcCCCeE-EeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCH
Confidence 4566777644 34432 2678899999999999999999999999999999999999 9999999999999999999999
Q ss_pred hhhHHhHHHHHHHhhcccccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccCCh----
Q 014061 112 IENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGR---- 187 (431)
Q Consensus 112 ~en~gakll~e~a~~~~~~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~~~---- 187 (431)
+ |||++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++..
T Consensus 100 ~----Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~ 175 (562)
T 3p9d_E 100 I----AKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDEL 175 (562)
T ss_dssp H----HHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSS
T ss_pred H----HHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchh
Confidence 8 99999999999999999999999999999999999999999999999999999999999999999988632
Q ss_pred --HHHHHHHhhcCCC------hHHHHHHHHHHHHhhhcC-------CceEE--ecCCCceeeeEeeeceEEeccCCCCcc
Q 014061 188 --DDIKAVASISAGN------DEFIGNLIADAIIKIGAD-------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQF 250 (431)
Q Consensus 188 --~~l~~va~ts~~~------~~~l~~li~~Av~~vg~~-------g~I~i--~~G~~~~dsl~lv~G~~~~~g~~sp~f 250 (431)
+.|.++|+||+++ .+.|+++++||+..+.+. +.|++ ..|++++|| ++++||+|+++|.||||
T Consensus 176 ~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m 254 (562)
T 3p9d_E 176 FRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQM 254 (562)
T ss_dssp CHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSC
T ss_pred hHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCc
Confidence 6899999999864 578999999999988652 34544 579999998 99999999999999997
Q ss_pred ccccccCeeEeeCceeEeeccc-------------cCCHHh-----------HHHHHHHHHhCCCCEEEEecCCchHHHH
Q 014061 251 ITNQEKSLVEFDNAKVLITDQK-------------ISTVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLE 306 (431)
Q Consensus 251 ~~~~~~~~~~l~npkIll~d~~-------------I~~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~aL~ 306 (431)
.++.+ ....++||+|++++++ |+++++ +.+++++|.+.|+||||++++|+++|++
T Consensus 255 ~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~ 333 (562)
T 3p9d_E 255 PKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANH 333 (562)
T ss_dssp CC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHH
T ss_pred Ccccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHH
Confidence 55431 1112378888888876 445555 6789999999999999999999999999
Q ss_pred HHHHcccccceeeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEE-----eCCeEEEEeC
Q 014061 307 TLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV-----KSNSTTIVAD 381 (431)
Q Consensus 307 ~L~~n~l~G~~~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i-----~~~~~~ii~g 381 (431)
+|+.|++ ++|+ ++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++++|
T Consensus 334 ~L~~~~I------~~v~-----~v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g 397 (562)
T 3p9d_E 334 LLLQNDL------PAVR-----WVGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQ 397 (562)
T ss_dssp HHHTTTC------CCEE-----CCCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECC
T ss_pred HHHHCCC------EEEe-----ccCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEec
Confidence 9999874 4555 44689999999999999999 799999999999999998 4688888887
Q ss_pred CCC------------HHHHHHHHHHHHHHHhhc
Q 014061 382 PYT------------KAEIQARIMQIKKDLAAT 402 (431)
Q Consensus 382 ~~~------------~~~i~~ri~~l~~~i~~~ 402 (431)
|++ +..++++.+.+.+.+...
T Consensus 398 ~~~~~~~TIllrG~te~~l~E~kr~i~DAL~~~ 430 (562)
T 3p9d_E 398 SKETKTVTCFVRGSNKMIVDEAERALHDSLCVV 430 (562)
T ss_dssp CSCCSCCEEEEECTTTTTHHHHTHHHHHHHHHH
T ss_pred CCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 654 457899999999998764
No 21
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.9e-65 Score=539.52 Aligned_cols=320 Identities=19% Similarity=0.269 Sum_probs=284.9
Q ss_pred hhcc-HHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhcccc
Q 014061 53 ILFG-KESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (431)
Q Consensus 53 ~~~g-~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~~ 130 (431)
...| +++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||++
T Consensus 5 ~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~ 80 (512)
T 3iyg_Q 5 HFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQEQE 80 (512)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhhhh
Confidence 4567 799999999999999999999999999999999 99999999999999999999999 99999999999999
Q ss_pred cCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHcc----CcccCChHHHHHHHhhcCCC-----h
Q 014061 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQK----SFPVTGRDDIKAVASISAGN-----D 201 (431)
Q Consensus 131 vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~----s~~v~~~~~l~~va~ts~~~-----~ 201 (431)
+||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++ +.+++++++|.++|+||+++ +
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~ 160 (512)
T 3iyg_Q 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNE 160 (512)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccch
Confidence 99999999999999999999999999999999999999999999999998 56777899999999999986 7
Q ss_pred HHHHHHHHHHHHhhhcC-CceEE-------ecCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeeccc-
Q 014061 202 EFIGNLIADAIIKIGAD-GVILI-------ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK- 272 (431)
Q Consensus 202 ~~l~~li~~Av~~vg~~-g~I~i-------~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~- 272 (431)
++|++|+++|+.+++++ |.|++ ..|+++.|+ ++++||+|+++|.| |+..++||+|++++++
T Consensus 161 ~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~~l 230 (512)
T 3iyg_Q 161 VFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYSCPF 230 (512)
T ss_pred HHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEeccc
Confidence 89999999999999986 55543 359999887 99999999999865 4556778888888875
Q ss_pred ------------cCCHHhHHHH-------HH----HHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCCCCC
Q 014061 273 ------------ISTVKEIVPL-------LE----KTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGD 329 (431)
Q Consensus 273 ------------I~~~~~l~~~-------le----~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~g~ 329 (431)
|++++++.++ ++ ++.+.|+||||++++|++.++++|..+ +|+|||+|+
T Consensus 231 e~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~--- 301 (512)
T 3iyg_Q 231 DGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNS--- 301 (512)
T ss_pred ccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCC---
Confidence 5677787765 55 899999999999999999999998764 579999887
Q ss_pred CchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEe---CCe-------------EEEEeCCCCHHHHHHHHH
Q 014061 330 GKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNS-------------TTIVADPYTKAEIQARIM 393 (431)
Q Consensus 330 ~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~---~~~-------------~~ii~g~~~~~~i~~ri~ 393 (431)
+.+|+|||++|||++++ +++++++++||+|++|++. +++ +||+-++++...++++.+
T Consensus 302 --~~dle~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr 374 (512)
T 3iyg_Q 302 --KWDLRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIER 374 (512)
T ss_pred --HHHHHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHH
Confidence 67899999999999999 7999999999999999864 223 455555567778999999
Q ss_pred HHHHHHhhc
Q 014061 394 QIKKDLAAT 402 (431)
Q Consensus 394 ~l~~~i~~~ 402 (431)
.+.+.+...
T Consensus 375 ~i~DAl~~~ 383 (512)
T 3iyg_Q 375 AVDDGVNTF 383 (512)
T ss_pred HHHHHHHHH
Confidence 999998765
No 22
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.5e-64 Score=529.87 Aligned_cols=324 Identities=22% Similarity=0.317 Sum_probs=290.4
Q ss_pred hhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhcccc
Q 014061 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (431)
Q Consensus 52 ~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~~ 130 (431)
+...|.++|..|+.||+.|+++|||||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||++
T Consensus 3 ~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e 78 (515)
T 3iyg_G 3 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEE 78 (515)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhh
Confidence 34568999999999999999999999999999999999 99999999999999999999999 99999999999999
Q ss_pred cCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccC--ChHHHHHHHhhcCCC------hH
Q 014061 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------DE 202 (431)
Q Consensus 131 vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~--~~~~l~~va~ts~~~------~~ 202 (431)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++ .+
T Consensus 79 ~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~ 158 (515)
T 3iyg_G 79 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSS 158 (515)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHH
Confidence 9999999999999999999999999999999999999999999999999999887 478999999999864 46
Q ss_pred HHHHHHHHHHHhhhcC--C--------ceEE--ecCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeec
Q 014061 203 FIGNLIADAIIKIGAD--G--------VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (431)
Q Consensus 203 ~l~~li~~Av~~vg~~--g--------~I~i--~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d 270 (431)
.+++++++|+..+.++ + .|.+ .+|++++|+ ++++||+|+++|.||. |+++++||||+++|
T Consensus 159 ~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~ 230 (515)
T 3iyg_G 159 LACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLD 230 (515)
T ss_pred HHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEc
Confidence 7788999999988632 2 1444 489999998 9999999999999995 88999999999999
Q ss_pred c-------------ccCCHHhHHHHHH-----------HHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCC
Q 014061 271 Q-------------KISTVKEIVPLLE-----------KTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (431)
Q Consensus 271 ~-------------~I~~~~~l~~~le-----------~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~ 326 (431)
+ +|++++++.++++ +|.+.|++|||++++|++.|+++|..++ |+||
T Consensus 231 ~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~------I~av---- 300 (515)
T 3iyg_G 231 SSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRAN------ITAI---- 300 (515)
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCC------ceee----
Confidence 9 5778888888776 9999999999999999999999999754 4554
Q ss_pred CCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCC-ceEEEEe---CCeEEEEeCC------------CCHHHHHH
Q 014061 327 FGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGI-ARKVTVK---SNSTTIVADP------------YTKAEIQA 390 (431)
Q Consensus 327 ~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~-a~~V~i~---~~~~~ii~g~------------~~~~~i~~ 390 (431)
|++++++|+|||++|||++++ +++++++++||+ |+.|++. +++++++.|| +++..+++
T Consensus 301 -~~~~k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E 374 (515)
T 3iyg_G 301 -RRVRKTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSE 374 (515)
T ss_pred -ccCCHHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHH
Confidence 688999999999999999999 699999999999 9999864 3466666664 45668899
Q ss_pred HHHHHHHHHhhcC
Q 014061 391 RIMQIKKDLAATD 403 (431)
Q Consensus 391 ri~~l~~~i~~~~ 403 (431)
+.+.+.+.+....
T Consensus 375 ~er~i~Dal~~~r 387 (515)
T 3iyg_G 375 VERNLQDAMQVCR 387 (515)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999997653
No 23
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=7e-65 Score=541.91 Aligned_cols=320 Identities=19% Similarity=0.291 Sum_probs=284.9
Q ss_pred hhcc-HHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhcccc
Q 014061 53 ILFG-KESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (431)
Q Consensus 53 ~~~g-~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~~ 130 (431)
...| +++|..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||++
T Consensus 20 ~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~e 95 (568)
T 3p9d_H 20 SYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA----VKVLVMATEQQKID 95 (568)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH----HHHHHHHHHHHHTT
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHhhhce
Confidence 3345 679999999999999999999999999999999 99999999999999999999999 99999999999999
Q ss_pred cCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCccc----CChHHHHHHHhhcCC-----Ch
Q 014061 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPV----TGRDDIKAVASISAG-----ND 201 (431)
Q Consensus 131 vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v----~~~~~l~~va~ts~~-----~~ 201 (431)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++.++ ++++.|.++|+||++ ++
T Consensus 96 ~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~ 175 (568)
T 3p9d_H 96 MGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSE 175 (568)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCH
T ss_pred eCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchH
Confidence 999999999999999999999999999999999999999999999999999876 578899999999864 46
Q ss_pred HHHHHHHHHHHHhhhcC-----C-------ceEEe--cCCCceeeeEeeeceEEeccCCCCccccccccCeeEee---Cc
Q 014061 202 EFIGNLIADAIIKIGAD-----G-------VILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFD---NA 264 (431)
Q Consensus 202 ~~l~~li~~Av~~vg~~-----g-------~I~i~--~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~---np 264 (431)
++|++|+++|+.+++++ | .|+++ .|++++|| ++++||+|+++|. +|+++++ ||
T Consensus 176 ~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n~ 245 (568)
T 3p9d_H 176 DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKKH 245 (568)
T ss_dssp HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSSC
T ss_pred HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCcc
Confidence 89999999999999874 3 46664 59999999 9999999999873 3788888 99
Q ss_pred eeEeeccc-------------cCCHHhHHH-----------HHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeee
Q 014061 265 KVLITDQK-------------ISTVKEIVP-----------LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVA 320 (431)
Q Consensus 265 kIll~d~~-------------I~~~~~l~~-----------~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~ 320 (431)
||+++|++ |++++++.+ ++++|.+.|+||||++++|++.|+++|..++ |+
T Consensus 246 kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~g------I~ 319 (568)
T 3p9d_H 246 KVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYG------IL 319 (568)
T ss_dssp EEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHT------CE
T ss_pred eEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCC------eE
Confidence 99999998 677777654 7889999999999999999999999999874 68
Q ss_pred eecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEe---CCeEEEEeCCC--------------
Q 014061 321 VVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPY-------------- 383 (431)
Q Consensus 321 aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~---~~~~~ii~g~~-------------- 383 (431)
|||+|+ +.+|+|||++|||++++ +++++++++||+|+.|++. +++++++++|+
T Consensus 320 av~~v~-----~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~ 389 (568)
T 3p9d_H 320 VLKVPS-----KFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGA 389 (568)
T ss_dssp EECCCC-----HHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEES
T ss_pred EEecCC-----HHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCC
Confidence 998776 88999999999999999 6899999999999999754 35555555543
Q ss_pred CHHHHHHHHHHHHHHHhhc
Q 014061 384 TKAEIQARIMQIKKDLAAT 402 (431)
Q Consensus 384 ~~~~i~~ri~~l~~~i~~~ 402 (431)
++..++++.+.+.+.+...
T Consensus 390 t~~~l~E~er~i~DAL~vv 408 (568)
T 3p9d_H 390 TQNNLDDIERAIDDGVAAV 408 (568)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 5677888888888888653
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.5e-63 Score=524.94 Aligned_cols=322 Identities=21% Similarity=0.335 Sum_probs=281.2
Q ss_pred hhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhcccc
Q 014061 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (431)
Q Consensus 52 ~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~~ 130 (431)
+...|.+++..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||++
T Consensus 4 ~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~e 79 (517)
T 3iyg_Z 4 EVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDDI 79 (517)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999 99999999999999999999998 99999999999999
Q ss_pred cCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccC-ChHHHHHHHhhcCCC------hHH
Q 014061 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-GRDDIKAVASISAGN------DEF 203 (431)
Q Consensus 131 vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~-~~~~l~~va~ts~~~------~~~ 203 (431)
+||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +++.|.++|+||+++ .+.
T Consensus 80 ~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~ 159 (517)
T 3iyg_Z 80 TGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADV 159 (517)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999988 788999999999875 478
Q ss_pred HHHHHHHHHHhhhcCC------c--eEEecCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeecccc--
Q 014061 204 IGNLIADAIIKIGADG------V--ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKI-- 273 (431)
Q Consensus 204 l~~li~~Av~~vg~~g------~--I~i~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~I-- 273 (431)
|+++++||+..+.+++ . |....|++..|+ ++++||+|+++|.||| |+++++||+||++|++|
T Consensus 160 la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~ 231 (517)
T 3iyg_Z 160 LTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEY 231 (517)
T ss_pred HHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEecccccc
Confidence 9999999998886532 1 344589999998 9999999999999997 88899999999999986
Q ss_pred -----------CCHHhH-----------HHHHHHHHhCCC--------CE-EEEecCCchHHHHHHHHcccccceeeeee
Q 014061 274 -----------STVKEI-----------VPLLEKTTQLSV--------PL-LIIAEDISSQVLETLVMNKIRGLLNVAVV 322 (431)
Q Consensus 274 -----------~~~~~l-----------~~~le~i~~~g~--------~l-vIi~~~I~~~aL~~L~~n~l~G~~~v~aV 322 (431)
++++++ ...+++|...+. |+ ||++++|++.|+++|..++ |++|
T Consensus 232 ~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~g------I~~v 305 (517)
T 3iyg_Z 232 EKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEG------IIAL 305 (517)
T ss_pred cccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCC------CEEE
Confidence 334333 234555555544 44 5557999999999999864 5676
Q ss_pred cCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCC-CCCceEE---EEeCCeEEEEeCCCCH------------H
Q 014061 323 KCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQ-LGIARKV---TVKSNSTTIVADPYTK------------A 386 (431)
Q Consensus 323 k~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~-LG~a~~V---~i~~~~~~ii~g~~~~------------~ 386 (431)
+ ++++.+|+|||++|||++++ +++++++++ ||+|+ | .++++++++++||+++ .
T Consensus 306 ~-----~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~ 374 (517)
T 3iyg_Z 306 R-----RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKH 374 (517)
T ss_pred E-----ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHH
Confidence 6 45689999999999999999 799999999 99999 9 5678888888887654 4
Q ss_pred HHHHHHHHHHHHHhhc
Q 014061 387 EIQARIMQIKKDLAAT 402 (431)
Q Consensus 387 ~i~~ri~~l~~~i~~~ 402 (431)
.++++.+.+.+.+...
T Consensus 375 ~l~E~kr~l~DAl~~~ 390 (517)
T 3iyg_Z 375 TLTQIKDAIRDGLRAV 390 (517)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6777888888888654
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1e-63 Score=531.24 Aligned_cols=324 Identities=20% Similarity=0.315 Sum_probs=280.6
Q ss_pred hhhhccHHHHHHHHHHHHHHHHhhhcccCccccceeeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhccc
Q 014061 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (431)
Q Consensus 51 k~~~~g~~ar~~~~~~i~~la~~VktTlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~ 129 (431)
.+..+|.+++..|+.||+.|+++|+|||||+||||||++ +|+|+|||||+||||+|+++||+ |||++++|++||+
T Consensus 10 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd~ 85 (546)
T 3p9d_F 10 AESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQDE 85 (546)
T ss_dssp EEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 456679999999999999999999999999999999999 99999999999999999999999 9999999999999
Q ss_pred ccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHHHHHHHHHHHHHHHHccCcccC----ChHHHHHHHhhcCCC-----
Q 014061 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT----GRDDIKAVASISAGN----- 200 (431)
Q Consensus 130 ~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~G~~~a~~~~l~~L~~~s~~v~----~~~~l~~va~ts~~~----- 200 (431)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++++++ +++.|.++|+||+++
T Consensus 86 e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~ 165 (546)
T 3p9d_F 86 ITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDAD 165 (546)
T ss_dssp HCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHH
T ss_pred HhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchh
Confidence 99999999999999999999999999999999999999999999999999999884 688999999999975
Q ss_pred -hHHHHHHHHHHHHhhhcC-------CceEE--ecCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeec
Q 014061 201 -DEFIGNLIADAIIKIGAD-------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (431)
Q Consensus 201 -~~~l~~li~~Av~~vg~~-------g~I~i--~~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d 270 (431)
.+.|+++++||+..+.++ ..|.+ ..|++..|+ ++++||+|+++|.||+ |+++++|||||++|
T Consensus 166 ~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~~ 237 (546)
T 3p9d_F 166 LTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLILN 237 (546)
T ss_dssp HCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEEC
T ss_pred HHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEec
Confidence 478999999999988631 13444 579999998 9999999999999995 88999999999999
Q ss_pred cccC-------------CHHhH-----------HHHHHHHHh---------CCCC-EEEEecCCchHHHHHHHHcccccc
Q 014061 271 QKIS-------------TVKEI-----------VPLLEKTTQ---------LSVP-LLIIAEDISSQVLETLVMNKIRGL 316 (431)
Q Consensus 271 ~~I~-------------~~~~l-----------~~~le~i~~---------~g~~-lvIi~~~I~~~aL~~L~~n~l~G~ 316 (431)
++|+ +++++ ...+++|.. .|+| |||++++|+++|+++|+.|+
T Consensus 238 ~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g---- 313 (546)
T 3p9d_F 238 VSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN---- 313 (546)
T ss_dssp CCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT----
T ss_pred CcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC----
Confidence 8753 22222 234555554 3455 66677899999999999986
Q ss_pred eeeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEE---EeCCeEEEEeCCC----------
Q 014061 317 LNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPY---------- 383 (431)
Q Consensus 317 ~~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~---i~~~~~~ii~g~~---------- 383 (431)
|++|+ ++++.+|+|||++|||++++ +++++++++||+|+.|+ +++++++|++||+
T Consensus 314 --I~~vr-----~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lr 381 (546)
T 3p9d_F 314 --ILALR-----RAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIK 381 (546)
T ss_dssp --CEEEC-----CCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECC
T ss_pred --CeeEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEEC
Confidence 46665 56789999999999999999 79999999999999994 5666666666554
Q ss_pred --CHHHHHHHHHHHHHHHhhc
Q 014061 384 --TKAEIQARIMQIKKDLAAT 402 (431)
Q Consensus 384 --~~~~i~~ri~~l~~~i~~~ 402 (431)
++..++++.+.+.+.++..
T Consensus 382 G~te~~l~E~kr~l~DAl~~~ 402 (546)
T 3p9d_F 382 GSTHYALAQTKDAVRDGLRAV 402 (546)
T ss_dssp CSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999764
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=4.9e-58 Score=482.89 Aligned_cols=289 Identities=21% Similarity=0.309 Sum_probs=220.0
Q ss_pred eeec-CCceEEecChHHHHhhhcccCchhhHHhHHHHHHHhhcccccCCCcchHHHhHHHHHHhhhhhhccCCChhhHHH
Q 014061 86 ILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKK 164 (431)
Q Consensus 86 mI~~-~g~~~ITnDG~TIlk~i~l~hP~en~gakll~e~a~~~~~~vGDGTTt~vvLa~~Ll~~~~~li~~G~~p~~I~~ 164 (431)
||++ +|+|+|||||+||||+|+++||+ |||++++|++||+++||||||+||||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6778 89999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCcccC--ChHHHHHHHhhcC------CChHHHHHHHHHHHHhhhcC--Cc--------eEEe--
Q 014061 165 GMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISA------GNDEFIGNLIADAIIKIGAD--GV--------ILIE-- 224 (431)
Q Consensus 165 G~~~a~~~~l~~L~~~s~~v~--~~~~l~~va~ts~------~~~~~l~~li~~Av~~vg~~--g~--------I~i~-- 224 (431)
||++|++.++++|+++++|++ +.+.|.++|+||+ +++++|++++++|+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 999999999999999999986 4889999999874 36899999999999999876 53 5554
Q ss_pred cCCCceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeeccc-------------cCCHHhH-----------H
Q 014061 225 SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK-------------ISTVKEI-----------V 280 (431)
Q Consensus 225 ~G~~~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~-------------I~~~~~l-----------~ 280 (431)
+|++++|+ ++++||+|+++|.||| |+++++|||||++|++ |++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPN-------MPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTT-------SCSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCC-------CcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999988 9999999999999998 5778999999999999 6677765 8
Q ss_pred HHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCC
Q 014061 281 PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATS 360 (431)
Q Consensus 281 ~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~ 360 (431)
++++++.+.|+||||++++|+++|+++|+.|+ |+||+ ++++++|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 99999999999999999999999999999985 57764 88899999999999999999 7999999
Q ss_pred CCCCCceEEEEe---CCeEEEEeCCC------------CHHHHHHHHHHHHHHHhhc
Q 014061 361 DQLGIARKVTVK---SNSTTIVADPY------------TKAEIQARIMQIKKDLAAT 402 (431)
Q Consensus 361 ~~LG~a~~V~i~---~~~~~ii~g~~------------~~~~i~~ri~~l~~~i~~~ 402 (431)
++||+|++|++. ++++++++||+ ++..++++.+.+.+.+...
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~ 349 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVV 349 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999975 77888877654 5678999999999999765
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-58 Score=420.07 Aligned_cols=193 Identities=38% Similarity=0.637 Sum_probs=190.8
Q ss_pred eEeeeceEEeccCCCCccccccccCeeEeeCceeEeeccccCCHHhHHHHHHHHHhCCCCEEEEecCCchHHHHHHHHcc
Q 014061 233 IVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNK 312 (431)
Q Consensus 233 l~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~ 312 (431)
+++++||.||+||+||||+|++++|..+++||+||++|++|+++++++|+||++.+.|+||||++++|+++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEeCCeEEEEeCCCCHHHHHHHH
Q 014061 313 IRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVKSNSTTIVADPYTKAEIQARI 392 (431)
Q Consensus 313 l~G~~~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~~~~~~ii~g~~~~~~i~~ri 392 (431)
++|.++|||||+||||+.|++.|+|||.+|||++++++.|+++++++.++||+|++|.+++|+|+|+.|.|+++.|++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHhhcCCeEEE
Q 014061 393 MQIKKDLAATDNAYLSRKLSERIAKLSGGVAVI 425 (431)
Q Consensus 393 ~~l~~~i~~~~~~~~~~~l~eRla~l~g~~a~i 425 (431)
+||+.+|+.++|+||||||+||||||+||||||
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999999986
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=7.6e-57 Score=410.38 Aligned_cols=189 Identities=46% Similarity=0.772 Sum_probs=186.8
Q ss_pred eeceEEeccCCCCccccccccCeeEeeCceeEeeccccCCHHhHHHHHHHHHhCCCCEEEEecCCchHHHHHHHHccccc
Q 014061 236 EEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRG 315 (431)
Q Consensus 236 v~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G 315 (431)
.+||.||+||+||||+|++++|..+++||+||++|++|+++++++|+||++.+.|+||||++++|+++||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEeCCeEEEEeCCCCHHHHHHHHHHH
Q 014061 316 LLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVKSNSTTIVADPYTKAEIQARIMQI 395 (431)
Q Consensus 316 ~~~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~~~~~~ii~g~~~~~~i~~ri~~l 395 (431)
.++|||||+||||+.|++.|+|||++|||++++++.|+++++++.++||+|++|++++|+|+|+.|.|+++.|++|++||
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHHHHHhhcCCeEE
Q 014061 396 KKDLAATDNAYLSRKLSERIAKLSGGVAV 424 (431)
Q Consensus 396 ~~~i~~~~~~~~~~~l~eRla~l~g~~a~ 424 (431)
+.+|+.++|+||||||+||||||+|||||
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999999999999999999996
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=3.7e-42 Score=299.70 Aligned_cols=144 Identities=49% Similarity=0.795 Sum_probs=142.5
Q ss_pred ceEEeccCCCCccccccccCeeEeeCceeEeeccccCCHHhHHHHHHHHHhCCCCEEEEecCCchHHHHHHHHcccccce
Q 014061 238 GMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLL 317 (431)
Q Consensus 238 G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~ 317 (431)
||.|||||+||||+|++++|..+++||+||++|++|+++++++|+||++.+.|+||+|++++|+++||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEEeCCeEEEEeC
Q 014061 318 NVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVKSNSTTIVAD 381 (431)
Q Consensus 318 ~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i~~~~~~ii~g 381 (431)
+|||||+||||+.|++.|+|||.+|||++++++.|+++++++.++||+|++|++++|+|+|++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999986
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.86 E-value=1.7e-21 Score=178.49 Aligned_cols=134 Identities=22% Similarity=0.279 Sum_probs=113.9
Q ss_pred ceeeeEeeeceEEeccCCCCccccccccCeeEeeCceeEeeccccC-------------CHHh-----------HHHHHH
Q 014061 229 FETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIS-------------TVKE-----------IVPLLE 284 (431)
Q Consensus 229 ~~dsl~lv~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~I~-------------~~~~-----------l~~~le 284 (431)
++|| ++++|++|++++.+|. ||+.++||||++++++++ ++++ +...++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSSTT-------SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCCC-------CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 3677 9999999999998873 889999999999999853 3322 356788
Q ss_pred HHHhCCCCEEEEecCCchHHHHHHHHcccccceeeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCC
Q 014061 285 KTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLG 364 (431)
Q Consensus 285 ~i~~~g~~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG 364 (431)
+|++.|++|||++++|++.|+++|.+++ |+||+ ++++++|+|||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~g------I~~vr-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRAN------VTAIR-----RVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----CCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHCC------CEEEe-----cCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 9999999999999999999999999885 46665 77799999999999999999 79999999999
Q ss_pred C-ceEEE---EeCCeEEEEeCCCCHH
Q 014061 365 I-ARKVT---VKSNSTTIVADPYTKA 386 (431)
Q Consensus 365 ~-a~~V~---i~~~~~~ii~g~~~~~ 386 (431)
+ |+.|+ ++++++++++||+++.
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~~ 162 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDPK 162 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESSTT
T ss_pred CcccEEEEEEECCeEEEEEECCCCCC
Confidence 9 99998 4578999999987653
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.85 E-value=5.4e-21 Score=172.07 Aligned_cols=127 Identities=21% Similarity=0.263 Sum_probs=110.2
Q ss_pred eeceEEeccCCCCccccccccCeeEeeCceeEeeccccC-------------CHHh-----------HHHHHHHHHhCCC
Q 014061 236 EEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIS-------------TVKE-----------IVPLLEKTTQLSV 291 (431)
Q Consensus 236 v~G~~~~~g~~sp~f~~~~~~~~~~l~npkIll~d~~I~-------------~~~~-----------l~~~le~i~~~g~ 291 (431)
++|++|++++.+|. ||+.++||||+++|++++ ++++ +...+++|.+.|+
T Consensus 1 i~Gvv~~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSK-------MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTT-------SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCC-------CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 57999999998874 899999999999999853 3433 3467889999999
Q ss_pred CEEEEecCCchHHHHHHHHcccccceeeeeecCCCCCCCchhhHHHHHHHhCCeEeecCCCccccCCCCCCCCCceEEEE
Q 014061 292 PLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV 371 (431)
Q Consensus 292 ~lvIi~~~I~~~aL~~L~~n~l~G~~~v~aVk~~~~g~~r~~~LedIa~~TGa~ii~~~~~~~l~~~~~~~LG~a~~V~i 371 (431)
+|||++++|++.|+++|.+++ |+||+ ++++++|+|||++|||++++ ++++++++.||+|+.|++
T Consensus 74 nVVl~~k~I~d~a~~~l~k~g------I~~v~-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCC------CEEEc-----cCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 999999999999999999875 46665 77799999999999999999 799999999999999984
Q ss_pred ---eCCeEEEEeCCCCH
Q 014061 372 ---KSNSTTIVADPYTK 385 (431)
Q Consensus 372 ---~~~~~~ii~g~~~~ 385 (431)
++++++++.||.+-
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 68999999999764
No 32
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=24.15 E-value=45 Score=30.78 Aligned_cols=42 Identities=19% Similarity=0.368 Sum_probs=32.8
Q ss_pred eeCceeEeeccccCC-----HHhHHHHHHHHHhCCCCEEEEecCCch
Q 014061 261 FDNAKVLITDQKIST-----VKEIVPLLEKTTQLSVPLLIIAEDISS 302 (431)
Q Consensus 261 l~npkIll~d~~I~~-----~~~l~~~le~i~~~g~~lvIi~~~I~~ 302 (431)
+.+|+++++|.|.+. .+++..++..+.+.|..+|++..+.+.
T Consensus 169 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHd~~~ 215 (257)
T 1g6h_A 169 MTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDI 215 (257)
T ss_dssp HTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred HcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHH
Confidence 468999999998543 346778888877778889999988765
No 33
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=23.87 E-value=53 Score=29.56 Aligned_cols=42 Identities=12% Similarity=0.196 Sum_probs=32.6
Q ss_pred eeCceeEeecccc-----CCHHhHHHHHHHHHhCCCCEEEEecCCch
Q 014061 261 FDNAKVLITDQKI-----STVKEIVPLLEKTTQLSVPLLIIAEDISS 302 (431)
Q Consensus 261 l~npkIll~d~~I-----~~~~~l~~~le~i~~~g~~lvIi~~~I~~ 302 (431)
+.+|+++++|.+. .+.+++...++.+.+.|..++++..+.+.
T Consensus 149 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~ 195 (214)
T 1sgw_A 149 LVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSREELS 195 (214)
T ss_dssp TSCCSEEEEESTTTTSCTTTHHHHHHHHHHHHHHHSEEEEEESSCCT
T ss_pred HhCCCEEEEECCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH
Confidence 4689999999984 34567888888877667888888887654
No 34
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=23.34 E-value=72 Score=21.93 Aligned_cols=13 Identities=23% Similarity=0.496 Sum_probs=9.0
Q ss_pred HHHHHHHHHHhhc
Q 014061 407 LSRKLSERIAKLS 419 (431)
Q Consensus 407 ~~~~l~eRla~l~ 419 (431)
...+|+.||.+|.
T Consensus 31 sq~KlKqRit~lE 43 (46)
T 3swy_A 31 TQMKMKQRLSQLE 43 (46)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3467788887764
No 35
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=21.66 E-value=53 Score=19.35 Aligned_cols=13 Identities=38% Similarity=0.455 Sum_probs=8.9
Q ss_pred HHHHHHHHHHhhc
Q 014061 407 LSRKLSERIAKLS 419 (431)
Q Consensus 407 ~~~~l~eRla~l~ 419 (431)
+-|.|+|||.+|.
T Consensus 9 eledlqerlrklr 21 (27)
T 3twe_A 9 ELEDLQERLRKLR 21 (27)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3466888887764
No 36
>3ggz_E Vacuolar protein-sorting-associated protein 46; novel MIM binding mode, phosphoprotein, coiled coil, endosome, membrane; 3.80A {Saccharomyces cerevisiae}
Probab=21.63 E-value=54 Score=20.31 Aligned_cols=18 Identities=28% Similarity=0.390 Sum_probs=14.2
Q ss_pred CCHHHHHHHHHHHHhhcC
Q 014061 403 DNAYLSRKLSERIAKLSG 420 (431)
Q Consensus 403 ~~~~~~~~l~eRla~l~g 420 (431)
-+++.-++|-|||..|.|
T Consensus 12 ~~eekEDkLAqRLRALR~ 29 (29)
T 3ggz_E 12 VDDEKEDKLAQRLRALRG 29 (29)
T ss_pred ccchhhHHHHHHHHHHcC
Confidence 456777899999988874
No 37
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=21.04 E-value=1.4e+02 Score=27.94 Aligned_cols=38 Identities=11% Similarity=0.283 Sum_probs=33.4
Q ss_pred CCHHhHHHHHHHHHhCCCCEEEEecCCchHHHHHHHHc
Q 014061 274 STVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMN 311 (431)
Q Consensus 274 ~~~~~l~~~le~i~~~g~~lvIi~~~I~~~aL~~L~~n 311 (431)
.++++|..+++.+++.++++|++...+++...+.++..
T Consensus 221 ps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~ 258 (291)
T 1pq4_A 221 PSAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAE 258 (291)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHH
Confidence 57899999999999999999999999999888877643
Done!