BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014065
(431 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SMT7|4CLLA_ARATH 4-coumarate--CoA ligase-like 10 OS=Arabidopsis thaliana GN=4CLL10
PE=2 SV=1
Length = 514
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/418 (81%), Positives = 371/418 (88%), Gaps = 1/418 (0%)
Query: 1 MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVA-AGINAGDVVA 59
M+ TL GLL V +F +RALSVSGKF+LT++R+H+L+ERAASRLV+ AGI GDVVA
Sbjct: 1 MDSDTLSGLLENVAKKFPDRRALSVSGKFNLTHARLHDLIERAASRLVSDAGIKPGDVVA 60
Query: 60 LTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAA 119
LTFPNTVEFVIMFLAVIRARATAAPLNAAYT +EFEFYLSDS+SKLLLT EGNA AQ A
Sbjct: 61 LTFPNTVEFVIMFLAVIRARATAAPLNAAYTAEEFEFYLSDSDSKLLLTSKEGNAPAQEA 120
Query: 120 ASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGV 179
ASKL ISH TATLLDA S+L LS+A S+S ++ ++L N P D ALFLHTSGTTSRPKGV
Sbjct: 121 ASKLKISHVTATLLDAGSDLVLSVADSDSVVDSATELVNHPDDGALFLHTSGTTSRPKGV 180
Query: 180 PLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRF 239
PLTQ NLA+SV NIK+VYKLTESDSTVIVLPLFHVHG+LAGLLSS AGAAVTLPAAGRF
Sbjct: 181 PLTQLNLASSVKNIKAVYKLTESDSTVIVLPLFHVHGLLAGLLSSLGAGAAVTLPAAGRF 240
Query: 240 SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRL 299
SA+TFW DM KYNATWYTAVPTIHQI+LDRH + PE YPKLRFIRSCSASLAPVILSRL
Sbjct: 241 SATTFWPDMKKYNATWYTAVPTIHQIILDRHASHPETEYPKLRFIRSCSASLAPVILSRL 300
Query: 300 EEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAK 359
EEAFGAPVLEAYAMTEATHLMSSNPLPE+GPHKPGSVG+PVGQE+AIL+E G QE K
Sbjct: 301 EEAFGAPVLEAYAMTEATHLMSSNPLPEEGPHKPGSVGKPVGQEMAILNEKGEIQEPNNK 360
Query: 360 GEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
GEVCIRGPNVTKGYKNNPEANK+ F FGWFHTGDIGYFD+DGYLHLVGRIKELINRGG
Sbjct: 361 GEVCIRGPNVTKGYKNNPEANKAGFEFGWFHTGDIGYFDTDGYLHLVGRIKELINRGG 418
>sp|O74976|FAT2_SCHPO Putative peroxisomal-coenzyme A synthetase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1827.03c PE=1
SV=1
Length = 512
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/416 (49%), Positives = 265/416 (63%), Gaps = 17/416 (4%)
Query: 10 LNQVIDQFSSKRAL-SVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEF 68
L I +S RAL + S +L++S + + ++ + GI GD V + PN +EF
Sbjct: 6 LYSAIQGDASARALVAPSLNAELSFSELRIAIMDLQRQIASLGIKVGDPVNIAIPNGLEF 65
Query: 69 VIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQA----AASKLN 124
V+ F AV RA PLN+ Y EFEFY+ D +SKL++ P EG+ AA AA KL+
Sbjct: 66 VVAFYAVSWQRAICGPLNSNYKQSEFEFYIDDLKSKLVIVP-EGSVAANTPAVRAAKKLS 124
Query: 125 ISHATATLLDADSELTLSLAHSE-SDTNAISKL-TNDPSDVALFLHTSGTTSRPKGVPLT 182
+ A A L + + H E + NA L P DV L LHTSGTT RPK VPLT
Sbjct: 125 V--AVAELAWCPKSRLVRIVHFEGAKINAPQPLGLPQPDDVMLVLHTSGTTGRPKVVPLT 182
Query: 183 QNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAS 242
NL S+ NI + Y+L D++ +V+PLFHVHG+L GLLS+ A+G +P +FSA
Sbjct: 183 HKNLCRSIHNITTSYRLDPRDTSYVVMPLFHVHGLLCGLLSTLASGGCAVVPP--KFSAH 240
Query: 243 TFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEA 302
+FW++ I+Y ATWYTAVPTIHQI+L KP P++RFIRSCS+ LAP +LS+LE
Sbjct: 241 SFWKEFIQYGATWYTAVPTIHQILLRTPPPKP---LPRIRFIRSCSSPLAPPVLSKLEAT 297
Query: 303 FGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEV 362
F APVLEAYAMTEA+H M++NPLP HKP SVG+P G E+ ILD+ G G +GE+
Sbjct: 298 FRAPVLEAYAMTEASHQMTTNPLPPLV-HKPHSVGKPFGVELKILDQKGNEMPQGKEGEI 356
Query: 363 CIRGPNVTKGYKNNPEANKSAFLFG-WFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
C+RG NVTKGY NNP ANKS+F +F TGD G D DGY+ + GRIKEL+NRGG
Sbjct: 357 CVRGINVTKGYLNNPAANKSSFTKDRFFRTGDEGKLDKDGYVFITGRIKELVNRGG 412
>sp|P38137|FAT2_YEAST Peroxisomal-coenzyme A synthetase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCS60 PE=1 SV=1
Length = 543
Score = 297 bits (761), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 223/396 (56%), Gaps = 35/396 (8%)
Query: 56 DVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115
D VA++ N +EF++ FL APLN Y EF FYL+D +SK + P +G
Sbjct: 63 DTVAISMRNGLEFIVAFLGATMDAKIGAPLNPNYKEKEFNFYLNDLKSKAICVP-KGTTK 121
Query: 116 AQAAASKLNISHATATLLDADSELTLSLAHSESDT---------------NAISKLTNDP 160
Q+ S++ S +T + + E D N + +P
Sbjct: 122 LQS--SEILKSASTFGCFIVELAFDATRFRVEYDIYSPEDNYKRVIYRSLNNAKFVNTNP 179
Query: 161 ---------SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPL 211
SDVAL LHTSGTTS PK VPL N+ S NI + YKLT D + +V+PL
Sbjct: 180 VKFPGFARSSDVALILHTSGTTSTPKTVPLLHLNIVRSTLNIANTYKLTPLDRSYVVMPL 239
Query: 212 FHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHV 271
FHVHG++ LLS+F +V +P F FW +KYN W++ VPTI I+L+ +
Sbjct: 240 FHVHGLIGVLLSTFRTQGSVVVPDG--FHPKLFWDQFVKYNCNWFSCVPTISMIMLN--M 295
Query: 272 AKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPH 331
KP P +P +RFIRSCS++LAP +LE+ F APVLEAYAMTEA+H M+SN LP G
Sbjct: 296 PKPNP-FPHIRFIRSCSSALAPATFHKLEKEFNAPVLEAYAMTEASHQMTSNNLPP-GKR 353
Query: 332 KPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF--GWF 389
KPG+VG+P G + ILD+ G GEV IRG NVT GY NNP+ANK F +F
Sbjct: 354 KPGTVGQPQGVTVVILDDNDNVLPPGKVGEVSIRGENVTLGYANNPKANKENFTKRENYF 413
Query: 390 HTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISL 425
TGD GYFD +G+L L GRIKELINRGG I L
Sbjct: 414 RTGDQGYFDPEGFLVLTGRIKELINRGGEKISPIEL 449
>sp|Q0K844|SAUT_CUPNH Probable sulfoacetate--CoA ligase OS=Cupriavidus necator (strain
ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauT PE=2
SV=1
Length = 509
Score = 212 bits (540), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 191/373 (51%), Gaps = 14/373 (3%)
Query: 49 AAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108
AAG+ +G V++ PN + + L + P+N P + + L+ S+++L+ T
Sbjct: 57 AAGLGSGQTVSVYLPNGEQTARLLLGTMACGLVVNPINLLCQPAQLRYILAHSDTRLVFT 116
Query: 109 PAEGNAAAQAAASKLNIS-HATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFL 167
+G AA + A + + T DA+S L H + + AL +
Sbjct: 117 WPDGEAAIREALREAGLDVPVLVTAPDANSLPALPATHDAASPLPPPQPDA----PALLM 172
Query: 168 HTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAA 227
+TSGTT PKGV LTQ NL A+ +N+ + L +D + LPL+H++G++ ++
Sbjct: 173 YTSGTTGTPKGVLLTQRNLVANGTNVSREHCLGPADRVLATLPLYHINGLVVTAIAPLVH 232
Query: 228 GAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVL-DRHVAKPEPVYPKLRFIRS 286
G +V +P RFSAS FWQD ++ TW VPTI +L D H P V RF RS
Sbjct: 233 GGSVVMPM--RFSASAFWQDSARHGCTWLNVVPTIIAYLLNDPHGQAPAGV----RFCRS 286
Query: 287 CSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAI 346
SA+L P E FG V+E MTE SNPL + G + GS+GRP G +
Sbjct: 287 ASAALPPEHHRAFEARFGIGVIETMGMTETAAPAFSNPL-DPGQRRIGSIGRPSGTRARV 345
Query: 347 LDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF-GWFHTGDIGYFDSDGYLHL 405
L G P G GE+ ++G +V GY P+ + AF GW TGD+GY D+DGY ++
Sbjct: 346 LGRDGKPAPDGQVGEIVLQGESVMAGYYKAPDITREAFTHDGWLRTGDLGYRDADGYFYI 405
Query: 406 VGRIKELINRGGN 418
GR KELI +GG
Sbjct: 406 SGRAKELIIKGGE 418
>sp|O07610|LCFB_BACSU Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis (strain 168)
GN=lcfB PE=2 SV=2
Length = 513
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 210/419 (50%), Gaps = 20/419 (4%)
Query: 14 IDQFSSKRALSVSGKFD---LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVI 70
+++ +S++ S++ +F +TY ++E ++R A L AG+ GD +AL N+ +F+I
Sbjct: 7 LEETASEKPDSIACRFKDHMMTYQELNEYIQRFADGLQEAGMEKGDHLALLLGNSPDFII 66
Query: 71 MFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL-----LTPAEGNAAAQAAASKLNI 125
F ++A P+N YTP E + L++ + K + L P + +L I
Sbjct: 67 AFFGALKAGIVVVPINPLYTPTEIGYMLTNGDVKAIVGVSQLLPLYESMHESLPKVELVI 126
Query: 126 SHAT--ATLLDADSELTLSLAHSESDTNAISKLTND----PSDVALFLHTSGTTSRPKGV 179
T A AD E+ + + S + P D A+ L+TSGTT +PKG
Sbjct: 127 LCQTGEAEPEAADPEVRMKMTTFAKILRPTSAAKQNQEPVPDDTAVILYTSGTTGKPKGA 186
Query: 180 PLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRF 239
LT NL ++ +++ + E D+ V LP+FHV + + + +GA V + +F
Sbjct: 187 MLTHQNLYSNANDVAGYLGMDERDNVVCALPMFHVFCLTVCMNAPLMSGATVLIEP--QF 244
Query: 240 SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRL 299
S ++ ++ + + AT + VPT++ + K + + +R S AS+ +L+
Sbjct: 245 SPASVFKLVKQQQATIFAGVPTMYNYLFQHENGKKDD-FSSIRLCISGGASMPVALLTAF 303
Query: 300 EEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQ-EIAILDEIGVPQEGGA 358
EE FG +LE Y ++EA+ + NP D KPGS+G + E ++D +G
Sbjct: 304 EEKFGVTILEGYGLSEASPVTCFNPF--DRGRKPGSIGTSILHVENKVVDPLGRELPAHQ 361
Query: 359 KGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
GE+ ++GPNV KGY P + A GW +TGD+ D DGY ++V R K++I GG
Sbjct: 362 VGELIVKGPNVMKGYYKMPMETEHALKDGWLYTGDLARRDEDGYFYIVDRKKDMIIVGG 420
>sp|O53306|FAC13_MYCTU Long-chain-fatty-acid--CoA ligase FadD13 OS=Mycobacterium
tuberculosis GN=fadD13 PE=1 SV=1
Length = 503
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 198/394 (50%), Gaps = 22/394 (5%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+TY++++ L R A L A GI GD VAL PN+VEF +F + A A P+N
Sbjct: 30 MTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLA 89
Query: 91 PDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDT 150
E F LSDS SK+++ A A ++ + + ADS L L + +D
Sbjct: 90 APEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIGADS-LAERLRSAAADE 148
Query: 151 NAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLP 210
A+ +D ++TSGTT PKGV T ++ ++ S+ S + D ++ LP
Sbjct: 149 PAVECGGDDN---LFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLP 205
Query: 211 LFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRH 270
+FHV + + F+A VTL + +F A+ W +++ AVP I + R
Sbjct: 206 MFHVAALTTVI---FSAMRGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFM--RQ 260
Query: 271 VAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEA----THLMSSNPL 325
V + E P R+ + A + P L ++ A V++ YA+TE+ T L+S
Sbjct: 261 VPEFAELDAPDFRYFITGGAPM-PEALIKIYAAKNIEVVQGYALTESCGGGTLLLS---- 315
Query: 326 PEDGPHKPGSVGRP-VGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF 384
ED K GS GR + ++A+ + GV +E G +GEV I+ + K Y N PEA + AF
Sbjct: 316 -EDALRKAGSAGRATMFTDVAVRGDDGVIREHG-EGEVVIKSDILLKEYWNRPEATRDAF 373
Query: 385 LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGN 418
GWF TGDIG D +GYL++ R+K++I GG
Sbjct: 374 DNGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGE 407
>sp|A8ALR6|CAIC_CITK8 Probable crotonobetaine/carnitine-CoA ligase OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiC
PE=3 SV=1
Length = 517
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 188/408 (46%), Gaps = 22/408 (5%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ +A+GI GD VAL N EF + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFLASGIQKGDNVALHLDNCPEFFFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAH-SESD 149
+E + L +S ++L++T AE + + + L+ ++ + +++H S+
Sbjct: 98 REESAWILQNSRAQLIVTSAEFYPMYRQILLEDDTLLNHICLIGENAPVEDNVSHFSQLK 157
Query: 150 TNAISKLTNDP----SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDST 205
+ L P D A L TSGTTSRPKGV +T NL + L E D
Sbjct: 158 DQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSSWQCALREDDVY 217
Query: 206 VIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQI 265
+ V+P FH+ +++F+AG+ L ++SA FW + KY AT +P + +
Sbjct: 218 LTVMPAFHIDCQCTAAMAAFSAGSTFVL--IEKYSARAFWGQVRKYRATVTECIPMMIRT 275
Query: 266 VLDRHVAKPEPVYPKLR---FIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSS 322
++ A PE LR F + S ++R FG +L +Y MTE T +
Sbjct: 276 LM-VQPASPEERQHCLREVMFYLNLSVQEKDAFIAR----FGVRLLTSYGMTE-TIVGII 329
Query: 323 NPLPEDGPHKPGSVGRP-VGQEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKNNPE 378
P D P S+GRP E I DE G GE+CI+ G + K Y PE
Sbjct: 330 GDRPGDKRRWP-SIGRPGFCYEADIRDEQNRSLPAGEIGEICIKGVPGKTIFKEYYARPE 388
Query: 379 ANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISL 425
A A GW HTGD GY D +G+ + V R +I RGG I L
Sbjct: 389 ATAKALEANGWLHTGDSGYRDEEGFFYFVDRRCNMIKRGGENVSCIEL 436
>sp|Q65FT5|MENE_BACLD 2-succinylbenzoate--CoA ligase OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=menE PE=3 SV=1
Length = 478
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 191/409 (46%), Gaps = 35/409 (8%)
Query: 16 QFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAV 75
+ + R + G LT+ ++ ++ A RL + G+ GD AL N +E VI A
Sbjct: 14 ELTPDRMAVIQGDHKLTFIQLFHEAKKTAGRLKSFGLKNGDTAALLLTNRMEMVIAVHAC 73
Query: 76 IRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPA---EGNAAAQAAASKLNISHATATL 132
LN + E + + SE+KLLLT E + Q A + ++I
Sbjct: 74 FLLGVRIVLLNTKLSMAERSYQIEHSEAKLLLTEKPFIEEHRGGQPARA-VDIEDVQNAA 132
Query: 133 LDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLT-QNNLAASVS 191
+E I + D D A ++TSGTT RPKGV T N+ ++VS
Sbjct: 133 CPPVTE--------------IESIHLD--DAATIMYTSGTTGRPKGVMQTFANHYFSAVS 176
Query: 192 NIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKY 251
+ ++ L E D +I LPLFH+ G L+ L S G V L RF A + +
Sbjct: 177 SALNL-GLQEHDRWLIALPLFHISG-LSALFKSVIYGMTVVLHQ--RFDAEEVLRSIKDQ 232
Query: 252 NATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGA--PVLE 309
T + ++ Q +L R AK + LR + P LS LEE PV++
Sbjct: 233 QVT----IASVVQTMLSRLAAKVDRCPGSLRCLLLGGG---PAPLSLLEECKRKRLPVVQ 285
Query: 310 AYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNV 369
+Y MTE +++ PE K GS G+P+ +++ G + G GE+ ++GP V
Sbjct: 286 SYGMTETCSQIATLA-PEYSIEKLGSAGKPLFASSIKIEKNGTECQPGEHGEITVKGPTV 344
Query: 370 TKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGN 418
KGY N ANK +F GWF TGDIGYFD DG+L+++ R +LI GG
Sbjct: 345 MKGYLKNEAANKDSFNDGWFKTGDIGYFDDDGFLYVLDRRSDLIISGGE 393
>sp|P94547|LCFA_BACSU Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis (strain 168)
GN=lcfA PE=3 SV=1
Length = 560
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 206/450 (45%), Gaps = 50/450 (11%)
Query: 5 TLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPN 64
TL +L +F K A+S GK LT+ I + A+ L G+ GD VA+ PN
Sbjct: 25 TLQSILTDSAARFPDKTAISFYGK-KLTFHDILTDALKLAAFLQCNGLQKGDRVAVMLPN 83
Query: 65 TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT-----PAEGNAAAQAA 119
+ VI + V+ A N YT E E+ L D++ +++T P +
Sbjct: 84 CPQTVISYYGVLFAGGIVVQTNPLYTEHELEYQLRDAQVSVIITLDLLFPKAIKMKTLSI 143
Query: 120 ASKLNISHATATL-----------------LDADSEL---TLSLAHSESDTNAISKLTND 159
++ I+ L +D D T + + T ++ D
Sbjct: 144 VDQILITSVKDYLPFPKNILYPLTQKQKVHIDFDKTANIHTFASCMKQEKTELLTIPKID 203
Query: 160 PS-DVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS-VYKLTESDSTVI-VLPLFHVHG 216
P D+A+ +T GTT PKGV LT N+ A+ + +Y + E V+ ++P FHV+G
Sbjct: 204 PEHDIAVLQYTGGTTGAPKGVMLTHQNILANTEMCAAWMYDVKEGAEKVLGIVPFFHVYG 263
Query: 217 MLAGLLSSFAAG-AAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPE 275
+ A + S G + LP +F + + K+ T + PTI+ I L H PE
Sbjct: 264 LTAVMNYSIKLGFEMILLP---KFDPLETLKIIDKHKPTLFPGAPTIY-IGLLHH---PE 316
Query: 276 PVYPKLRFIRSC---SASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHK 332
+ L I+SC SA+L + + E+ G ++E Y ++EA+ + +N + G +K
Sbjct: 317 LQHYDLSSIKSCLSGSAALPVEVKQKFEKVTGGKLVEGYGLSEASPVTHANFI--WGKNK 374
Query: 333 PGSVGRPVGQEIAIL-----DEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFG 387
PGS+G P A + E+ P E GE+ ++GP V KGY N PE + G
Sbjct: 375 PGSIGCPWPSTDAAIYSEETGELAAPYE---HGEIIVKGPQVMKGYWNKPEETAAVLRDG 431
Query: 388 WFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
W TGD+GY D +G+ ++ R K++I GG
Sbjct: 432 WLFTGDMGYMDEEGFFYIADRKKDIIIAGG 461
>sp|A9MYJ6|CAIC_SALPB Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
paratyphi B (strain ATCC BAA-1250 / SPB7) GN=caiC PE=3
SV=1
Length = 517
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 182/403 (45%), Gaps = 28/403 (6%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ + GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFYSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDAD---SELTLSL 143
+E + L +S+ LL+T A+ Q ++ LN L AD S T
Sbjct: 98 GEESAWILQNSQVSLLVTSAQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFTQRQ 157
Query: 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
+ + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 SRQSTTLCYTPALSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + KY AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWDQVRKYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLR---FIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320
+ ++ + A P LR F + SA R FG +L +Y MTE T +
Sbjct: 274 RTLMVQPAA-PTDRQHHLREVMFYLNLSAQEKDAFTER----FGVRLLTSYGMTE-TIVG 327
Query: 321 SSNPLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR VG E I D+ P G GE+CI+ G + K Y
Sbjct: 328 IIGDRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYM 385
Query: 376 NPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
PEA A GW HTGD GY D DGY + V R +I RGG
Sbjct: 386 QPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|B4TWR4|CAIC_SALSV Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
schwarzengrund (strain CVM19633) GN=caiC PE=3 SV=1
Length = 517
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 182/403 (45%), Gaps = 28/403 (6%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ A GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFYALGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDAD---SELTLSL 143
+E + L +S+ LL+T A+ Q ++ LN L AD S +
Sbjct: 98 GEESAWILQNSQVSLLVTSAQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFSQLQ 157
Query: 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
A + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 ARQSATLCYTPALSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + KY AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWDQVRKYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLR---FIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320
+ ++ + A P LR F + SA R FG +L +Y MTE T +
Sbjct: 274 RTLMVQPAA-PTDRQHHLREVMFYLNLSAQEKDAFTER----FGVRLLTSYGMTE-TIVG 327
Query: 321 SSNPLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR VG E I D+ P G GE+CI+ G + K Y
Sbjct: 328 IIGDRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYM 385
Query: 376 NPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
PEA A GW HTGD GY D DGY + V R +I RGG
Sbjct: 386 QPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|B4T6J6|CAIC_SALNS Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella newport
(strain SL254) GN=caiC PE=3 SV=1
Length = 517
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 182/403 (45%), Gaps = 28/403 (6%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ I+E + R A+ + GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASINEEINRTANLFYSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDAD---SELTLSL 143
+E + L +S+ LL+T A+ Q ++ LN L AD S +
Sbjct: 98 GEESAWILQNSQVSLLVTSAQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFSQLQ 157
Query: 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
A + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 ARQSATLCYTPALSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + KY AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWDQVRKYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLR---FIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320
+ ++ + A P LR F + SA R FG +L +Y MTE T +
Sbjct: 274 RTLMVQPAA-PTDRQHHLREVMFYLNLSAQEKDAFTER----FGVRLLTSYGMTE-TIVG 327
Query: 321 SSNPLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR VG E I D+ P G GE+CI+ G + K Y
Sbjct: 328 IIGDRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYM 385
Query: 376 NPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
PEA A GW HTGD GY D DGY + V R +I RGG
Sbjct: 386 QPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|B4EY25|CAIC_PROMH Probable crotonobetaine/carnitine-CoA ligase OS=Proteus mirabilis
(strain HI4320) GN=caiC PE=3 SV=1
Length = 518
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 203/432 (46%), Gaps = 31/432 (7%)
Query: 6 LIGLLNQVIDQFSSKRAL---SVSGKF-DLTYSRIHELVERAASRLVAAGINAGDVVALT 61
L + + + + + K AL S GK +YS ++E + RAA+ A GI GD VAL
Sbjct: 9 LRQMWDDLAEVYDKKTALIFESAQGKVRQFSYSELNEEINRAANLFHACGIKKGDHVALH 68
Query: 62 FPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAAS 121
N EF + + + A P+NA + +E + ++ ++ ++T + Q
Sbjct: 69 LDNCPEFFFCWFGLAKIGAVMVPINARFMYEESAWIINHCQAHFVVTSDNFSPIYQPM-- 126
Query: 122 KLNISHATATLLDADSELTLSLAH------SESDTNAISKLTNDP---SDVALFLHTSGT 172
L+ H+ T L +E L SE + ++ + P D A L TSGT
Sbjct: 127 -LHDKHSPLTQLFLITENCLPTEQGVVDFLSEKAKHPVTLNHHTPLSVDDTAEILFTSGT 185
Query: 173 TSRPKGVPLTQNNL--AASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAA 230
TS+PKGV +T NL A S+ ++ L E D + V+P FH+ L +F+ GA
Sbjct: 186 TSQPKGVVITHYNLRFAGYYSSWQNA--LREDDIYLTVMPAFHIDCQCTASLPAFSVGAT 243
Query: 231 VTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSAS 290
L ++SA FW+ ++KY AT +P + + ++ + V+ P+ KLR + +
Sbjct: 244 FVL--LEKYSARAFWKQILKYQATVTECIPMMMRTLMAQPVS-PDEKQHKLREVMF-YLN 299
Query: 291 LAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRP-VGQEIAILDE 349
LA E F +L +Y MTE + + P D P S+GRP + I D+
Sbjct: 300 LADEEKDAFIERFNVRLLTSYGMTETIVGLIGD-RPGDKRRWP-SIGRPGFCYQAQIRDK 357
Query: 350 IGVPQEGGAKGEVCIRG-PNVT--KGYKNNPEANKSAFL-FGWFHTGDIGYFDSDGYLHL 405
G GE+C++G P T K Y N P+A + A GW HTGD GY D +G+ +
Sbjct: 358 QNQQVPNGVVGEICVKGEPGKTLFKEYYNRPDATEKALEPDGWLHTGDYGYQDDEGFFYF 417
Query: 406 VGRIKELINRGG 417
V R +I RGG
Sbjct: 418 VDRSCNMIKRGG 429
>sp|Q8ZRX4|CAIC_SALTY Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=caiC PE=3 SV=1
Length = 517
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 182/400 (45%), Gaps = 22/400 (5%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ + GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFYSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDAD---SELTLSL 143
+E + L +S+ LL+T A+ Q ++ LN L AD S T
Sbjct: 98 GEESAWILQNSQVSLLVTSAQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFTQLQ 157
Query: 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
A + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 ARQSATLCYTPVLSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + KY AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWDQVRKYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSN 323
+ ++ + A P LR + +L+ E FG +L +Y MTE T +
Sbjct: 274 RTLMVQPAA-PTDRQHHLREVMF-YLNLSEQEKDDFTERFGVRLLTSYGMTE-TIVGIIG 330
Query: 324 PLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKNNPE 378
P D P S+GR VG E I D+ P G GE+CI+ G + K Y PE
Sbjct: 331 DRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPE 388
Query: 379 ANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
A A GW HTGD GY D DGY + V R +I RGG
Sbjct: 389 ATAKALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|B4TIH0|CAIC_SALHS Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
heidelberg (strain SL476) GN=caiC PE=3 SV=1
Length = 517
Score = 155 bits (392), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 182/400 (45%), Gaps = 22/400 (5%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ + GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFYSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDAD---SELTLSL 143
+E + L +S+ LL+T A+ Q ++ LN L AD S T
Sbjct: 98 GEESAWILQNSQVSLLVTSAQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFTQLQ 157
Query: 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
A + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 ARQSATLCYTPVLSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + KY AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWDQVRKYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSN 323
+ ++ + A P LR + +L+ E FG +L +Y MTE T +
Sbjct: 274 RTLMVQPAA-PTDRQHHLREVMF-YLNLSEQEKDDFTERFGVRLLTSYGMTE-TIVGIIG 330
Query: 324 PLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKNNPE 378
P D P S+GR VG E I D+ P G GE+CI+ G + K Y PE
Sbjct: 331 DRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPE 388
Query: 379 ANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
A A GW HTGD GY D DGY + V R +I RGG
Sbjct: 389 ATAKALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|B5F750|CAIC_SALA4 Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella agona
(strain SL483) GN=caiC PE=3 SV=1
Length = 517
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 180/398 (45%), Gaps = 18/398 (4%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ + GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFYSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDADSELT-LSLAH 145
+E + L +S+ LL+T A+ Q ++ LN L AD ++ +
Sbjct: 98 GEESAWILQNSQVSLLVTSAQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFTQLQ 157
Query: 146 SESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDST 205
S T D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 SRQSTTLCYTPALSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDDVY 217
Query: 206 VIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQI 265
+ V+P FH+ + +F+AG+ L ++SA FW + KY AT +P + +
Sbjct: 218 MTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWDQVRKYQATVTECIPMMIRT 275
Query: 266 VLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPL 325
++ + A P LR + +L+ E FG +L +Y MTE T +
Sbjct: 276 LMVQPAA-PTDRQHHLREVMF-YLNLSEQEKDDFTERFGVRLLTSYGMTE-TIVGIIGDR 332
Query: 326 PEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKNNPEAN 380
P D P S+GR VG E I D+ P G GE+CI+ G + K Y PEA
Sbjct: 333 PGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEAT 390
Query: 381 KSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
A GW HTGD GY D DGY + V R +I RGG
Sbjct: 391 ARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|B5BL55|CAIC_SALPK Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
paratyphi A (strain AKU_12601) GN=caiC PE=3 SV=1
Length = 517
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 186/403 (46%), Gaps = 28/403 (6%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ + GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFHSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDADSELTL--SLA 144
+E + L +S+ LL+T A+ Q ++ LN L AD ++L L
Sbjct: 98 GEESAWILQNSQVSLLVTSAQFYPMYREIRQGNSTPLNHICLIGEQLPADDGVSLFSQLQ 157
Query: 145 HSESDTNAIS-KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
+S T + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 ARQSATLCYTPALSTD--DAAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + KY AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWGQVRKYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLR---FIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320
+ ++ + A P LR F + SA R FG +L +Y MTE T +
Sbjct: 274 RTLMVQPAA-PTDRQHHLREVMFYLNLSAQEKDAFTER----FGVRLLTSYGMTE-TIVG 327
Query: 321 SSNPLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR VG E I D+ P G GE+CI+ G + K Y
Sbjct: 328 IIGDRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYM 385
Query: 376 NPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
PEA A GW HTGD GY D DGY + V R +I RGG
Sbjct: 386 QPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|Q5PIL0|CAIC_SALPA Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=caiC PE=3
SV=1
Length = 517
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 186/403 (46%), Gaps = 28/403 (6%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ + GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFHSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDADSELTL--SLA 144
+E + L +S+ LL+T A+ Q ++ LN L AD ++L L
Sbjct: 98 GEESAWILQNSQVSLLVTSAQFYPMYREIRQGNSTPLNHICLIGEQLPADDGVSLFSQLQ 157
Query: 145 HSESDTNAIS-KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
+S T + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 ARQSATLCYTPALSTD--DAAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + KY AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWGQVRKYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLR---FIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320
+ ++ + A P LR F + SA R FG +L +Y MTE T +
Sbjct: 274 RTLMVQPAA-PTDRQHHLREVMFYLNLSAQEKDAFTER----FGVRLLTSYGMTE-TIVG 327
Query: 321 SSNPLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR VG E I D+ P G GE+CI+ G + K Y
Sbjct: 328 IIGDRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYM 385
Query: 376 NPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
PEA A GW HTGD GY D DGY + V R +I RGG
Sbjct: 386 QPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|P41636|4CL_PINTA 4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1
Length = 537
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 199/427 (46%), Gaps = 40/427 (9%)
Query: 14 IDQFSSKRALSVSGKFDLTY--SRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIM 71
+ +F+ + L + G D TY S + + + A+ L G+ G VV L PN +EF +
Sbjct: 35 VAEFADRPCL-IDGATDRTYCFSEVELISRKVAAGLAKLGLQQGQVVMLLLPNCIEFAFV 93
Query: 72 FLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATAT 131
F+ A N Y P E + +++++T A A + A + T
Sbjct: 94 FMGASVRGAIVTTANPFYKPGEIAKQAKAAGARIIVTLA---AYVEKLADLQSHDVLVIT 150
Query: 132 LLDADSELTLSLA-HSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASV 190
+ DA E ++ +E+D + P DV ++SGTT PKGV LT L +SV
Sbjct: 151 IDDAPKEGCQHISVLTEADETQCPAVKIHPDDVVALPYSSGTTGLPKGVMLTHKGLVSSV 210
Query: 191 SNI-----KSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFW 245
+ ++Y D + VLPLFH++ + + LL + AGAA + +F+ +T
Sbjct: 211 AQQVDGENPNLY-FHSDDVILCVLPLFHIYSLNSVLLCALRAGAATLI--MQKFNLTTCL 267
Query: 246 QDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPK-----LRFIRSCSASLAPVILSRLE 300
+ + KY T P + IVLD + K P+ + +R I S +A L + L
Sbjct: 268 ELIQKYKV---TVAPIVPPIVLD--ITK-SPIVSQYDVSSVRIIMSGAAPLGKELEDALR 321
Query: 301 EAFGAPVL-EAYAMTEATHLM------SSNPLPEDGPHKPGSVGRPV-GQEIAILD-EIG 351
E F + + Y MTEA ++ + NP P K GS G V +I ILD E G
Sbjct: 322 ERFPKAIFGQGYGMTEAGPVLAMNLAFAKNPFPV----KSGSCGTVVRNAQIKILDTETG 377
Query: 352 VPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIK 410
GE+CIRGP + KGY N+PE+ + GW HTGD+ Y D D + +V R+K
Sbjct: 378 ESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVEYIDDDEEIFIVDRVK 437
Query: 411 ELINRGG 417
E+I G
Sbjct: 438 EIIKYKG 444
>sp|B5FHG5|CAIC_SALDC Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella dublin
(strain CT_02021853) GN=caiC PE=3 SV=1
Length = 517
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 182/403 (45%), Gaps = 28/403 (6%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ + GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFYSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDAD---SELTLSL 143
+E + L +S+ LL+T A+ Q ++ LN L AD S +
Sbjct: 98 GEESAWILQNSQVSLLVTSAQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFSQLQ 157
Query: 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
A + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 ARQSATLCYTPVLSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + KY AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWDQVRKYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLR---FIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320
+ ++ + A P LR F + SA R FG +L +Y MTE T +
Sbjct: 274 RTLMVQPAA-PTDRQHHLREVMFYLNLSAQEKDAFTER----FGVRLLTSYGMTE-TIVG 327
Query: 321 SSNPLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR VG E I D+ P G GE+CI+ G + K Y
Sbjct: 328 IIGDRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYM 385
Query: 376 NPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
PEA A GW HTGD GY D DGY + V R +I RGG
Sbjct: 386 QPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|Q8Z9L4|CAIC_SALTI Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella typhi
GN=caiC PE=3 SV=1
Length = 517
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 180/403 (44%), Gaps = 28/403 (6%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFYYLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDAD---SELTLSL 143
+E + L +S+ LL+T A+ Q ++ LN L AD S +
Sbjct: 98 GEESAWILQNSQVSLLVTSAQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFSQLQ 157
Query: 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
A + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 ARQSATLCYTPALSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + KY AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWDQVRKYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLR---FIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320
+ ++ A P LR F + SA R FG +L +Y MTE T +
Sbjct: 274 RTLM-VQPATPTDRQHHLREVMFYLNLSAQEKDAFTER----FGVRLLTSYGMTE-TIVG 327
Query: 321 SSNPLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR VG E I D+ P G GE+CI+ G + K Y
Sbjct: 328 IIGDRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYM 385
Query: 376 NPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
PEA A GW HTGD GY D DGY + V R +I RGG
Sbjct: 386 QPEATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|B5R1R0|CAIC_SALEP Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
enteritidis PT4 (strain P125109) GN=caiC PE=3 SV=1
Length = 517
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 181/400 (45%), Gaps = 22/400 (5%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ + GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFYSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDAD---SELTLSL 143
+E + L +S+ LL+T + Q ++ LN L AD S +
Sbjct: 98 GEESAWILQNSQVSLLVTSVQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFSQLQ 157
Query: 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
A + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 ARQSATLCYTPALSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + KY AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWDQVRKYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSN 323
+ ++ + A P LR + +L+ E FG +L +Y MTE T +
Sbjct: 274 RTLMVQPAA-PTDRQHHLREVMF-YLNLSEQEKDDFTERFGVRLLTSYGMTE-TIVGIIG 330
Query: 324 PLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKNNPE 378
P D P S+GR VG E I D+ P G GE+CI+ G + K Y PE
Sbjct: 331 DRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPE 388
Query: 379 ANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
A A GW HTGD GY D DGY + V R +I RGG
Sbjct: 389 ATARALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|Q57TJ0|CAIC_SALCH Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
choleraesuis (strain SC-B67) GN=caiC PE=3 SV=1
Length = 517
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 181/403 (44%), Gaps = 28/403 (6%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ + GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFYSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDAD---SELTLSL 143
+E + L +S+ LL+T + Q ++ LN L AD S +
Sbjct: 98 GEESAWILQNSQVSLLVTSVQFYPMYREIRQDNSTPLNHICLIGEQLPADDGVSHFSQLQ 157
Query: 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
A + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 ARQSATLCYTPALSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + +Y AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWDQVRRYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLR---FIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320
+ ++ + A P LR F + SA R FG +L +Y MTE T +
Sbjct: 274 RTLMVQPAA-PTDRQHHLREVMFYLNLSAQEKDAFTER----FGVRLLTSYGMTE-TIVG 327
Query: 321 SSNPLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR VG E I D+ P G GE+CI+ G + K Y
Sbjct: 328 IIGDRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYM 385
Query: 376 NPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
PEA A GW HTGD GY D DGY + V R +I RGG
Sbjct: 386 QPEATAGALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|C0Q4L3|CAIC_SALPC Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella
paratyphi C (strain RKS4594) GN=caiC PE=3 SV=1
Length = 517
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 181/403 (44%), Gaps = 28/403 (6%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
+Y+ ++E + R A+ + GI GD VAL N EF+ + + + A P+NA
Sbjct: 38 FSYASLNEEINRTANLFYSLGIRKGDRVALHLDNCPEFIFCWFGLAKIGAIMVPINARLL 97
Query: 91 PDEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDAD---SELTLSL 143
+E + L +S+ LL+T + Q ++ LN L AD S +
Sbjct: 98 GEESAWILQNSQVSLLVTSVQFYPMYREIHQDNSTPLNHICLIGEQLPADDGVSHFSQLQ 157
Query: 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
A + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 158 ARQSATLCYTPALSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQIALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ + +F+AG+ L ++SA FW + +Y AT +P +
Sbjct: 216 VYMTVMPAFHIDCQCTAAMPAFSAGSTFVL--LEKYSARAFWDQVRRYQATVTECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLR---FIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320
+ ++ + A P LR F + SA R FG +L +Y MTE T +
Sbjct: 274 RTLMVQPAA-PTDRQHHLREVMFYLNLSAQEKDAFTER----FGVRLLTSYGMTE-TIVG 327
Query: 321 SSNPLPEDGPHKPGSVGRPVG--QEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR VG E I D+ P G GE+CI+ G + K Y
Sbjct: 328 IIGDRPGDKRRWP-SIGR-VGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYM 385
Query: 376 NPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
PEA A GW HTGD GY D DGY + V R +I RGG
Sbjct: 386 QPEATAGALEPEGWLHTGDSGYQDEDGYFYFVDRRCNMIKRGG 428
>sp|Q6ZAC1|4CL5_ORYSJ Probable 4-coumarate--CoA ligase 5 OS=Oryza sativa subsp. japonica
GN=4CL5 PE=2 SV=1
Length = 539
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 191/404 (47%), Gaps = 31/404 (7%)
Query: 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90
L++ + L R A+ L + G+ G V L PN+VEF + FLA R A N +T
Sbjct: 51 LSFGDVDALSRRVAAGLSSIGVCHGSTVMLLLPNSVEFAVAFLASSRLGAVTTTANPLHT 110
Query: 91 PDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAH-SESD 149
P E ++ S + +++T A A S L + T +E S A + +D
Sbjct: 111 PPEIAKQVAASGATVVVT----EPAFVAKVSGL--AGVTVVATGGGAERCASFAGLAAAD 164
Query: 150 TNAISKLTNDPSDVALFL-HTSGTTSRPKGVPLTQNNLAASVSNI----KSVYKLTESDS 204
+A+ ++ D ++ A+ L ++SGTT PKGV L+ L SV+ + L E D
Sbjct: 165 GSALPEVAIDVANDAVALPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGENPNLHLREDDV 224
Query: 205 TVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTI-- 262
+ VLP+FHV+ + + LL AGAA+ + RF Q + ++ T VP I
Sbjct: 225 VLCVLPMFHVYSLHSILLCGMRAGAAIVV--MKRFDTVKMLQLVERHGVTIAPLVPPIVV 282
Query: 263 ---HQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVL-EAYAMTEATH 318
LDRH +R + S +A + + + VL + Y MTEA
Sbjct: 283 EMAKSDALDRH------DLSSIRMVISGAAPMGKELQDIVHAKLPNAVLGQGYGMTEAGP 336
Query: 319 LMSSNP--LPEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYK 374
++S E P K G+ G V E+ I+D + G+ GE+CIRG + KGY
Sbjct: 337 VLSMCMAFAKEPTPVKSGACGTVVRNAELKIVDPDTGLSLPRNQPGEICIRGKQIMKGYL 396
Query: 375 NNPEA-NKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
NNPEA K+ GW HTGDIG+ D D + +V R+KELI G
Sbjct: 397 NNPEATEKTIDKDGWLHTGDIGFVDDDDEIFIVDRLKELIKYKG 440
>sp|Q5KVX9|MENE_GEOKA 2-succinylbenzoate--CoA ligase OS=Geobacillus kaustophilus (strain
HTA426) GN=menE PE=3 SV=1
Length = 490
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 185/406 (45%), Gaps = 30/406 (7%)
Query: 17 FSSKRALSVS-GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAV 75
F + ++VS G+ T++ ++E A RL AG+ GD+VAL N +E + + A+
Sbjct: 13 FLTPERIAVSDGRRTKTFAELYEAAAVWARRLAQAGVKEGDIVALLMKNRIEMIEIIHAL 72
Query: 76 IRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA 135
A N T E + L DS ++L + E A LD
Sbjct: 73 FFLGARVLLQNVRLTSYELGWQLDDSGARLAIADEE-----------------LAGSLDG 115
Query: 136 DSE-LTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIK 194
D LT+ + + + K T D +VA ++TSGTT PKGV T N S
Sbjct: 116 DGRVLTVGAVAALPEVDVSLKETCDLEEVATIMYTSGTTGTPKGVLQTYGNHWWSAVGSA 175
Query: 195 SVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNAT 254
L E D + +PLFH+ G L+ + S G + L + + W +++ + T
Sbjct: 176 LNLGLHERDCWLAAVPLFHISG-LSIAMRSVIYGMPMRLQTSFDPKEANEW--IMRGDVT 232
Query: 255 WYTAVPTIHQIVLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAM 313
+ ++ +L R VA+ E YP AP L + G PV + Y M
Sbjct: 233 ----IMSVVAAMLQRMVAELGEARYPDTFRCMLLGGGPAPRPLLEACKEKGIPVYQTYGM 288
Query: 314 TEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKG 372
TE +++ PE K GS G+P+ E+ IL + G P GE+ ++GPNVTKG
Sbjct: 289 TETASQIATLA-PEYSLTKLGSAGKPLFPAELCILKD-GKPAAPHEAGEIVVKGPNVTKG 346
Query: 373 YKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGN 418
Y PEA A GWF TGDIGY D DG+L+++ R +LI GG
Sbjct: 347 YWQRPEATAQAIRGGWFFTGDIGYLDEDGFLYVLDRRSDLIISGGE 392
>sp|O24145|4CL1_TOBAC 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1
Length = 547
Score = 148 bits (373), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 198/422 (46%), Gaps = 30/422 (7%)
Query: 14 IDQFSSKRALSVSGKFD--LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIM 71
I +FSS+ L ++G D TY+ + + A L GI D + + PN+ EFV
Sbjct: 40 ISEFSSRPCL-INGANDQIYTYAEVELTCRKVAVGLNKLGIQQKDTIMILLPNSPEFVFA 98
Query: 72 FLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATAT 131
F+ A + N +TP E S +K+++T + + AS+ ++
Sbjct: 99 FMGASYLGAISTMANPLFTPAEVVKQAKASSAKIIITQSCFVGKVKDYASENDVK---VI 155
Query: 132 LLDADSELTLSLAH-SESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASV 190
+D+ E L + ++SD + I ++ P DV ++SGTT PKGV LT L SV
Sbjct: 156 CIDSAPEGCLHFSELTQSDEHEIPEVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSV 215
Query: 191 SNI-----KSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFW 245
+ ++Y +E D + VLPLFH++ + + LL GAA+ + +F + F
Sbjct: 216 AQQVDGENANLYMHSE-DVLMCVLPLFHIYSLNSILLCGLRVGAAILI--MQKFDIAPFL 272
Query: 246 QDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-- 303
+ + KY + VP I + + L +R+ + AP + LE+A
Sbjct: 273 ELIQKYKVSIGPFVPPIVLAIAKSPIVDSY----DLSSVRTVMSGAAP-LGKELEDAVRT 327
Query: 304 ---GAPVLEAYAMTEATHLMSSNPLPEDGPH--KPGSVGRPV-GQEIAILD-EIGVPQEG 356
A + + Y MTEA +++ P K G+ G V E+ I+D + G
Sbjct: 328 KFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPR 387
Query: 357 GAKGEVCIRGPNVTKGYKNNPEAN-KSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINR 415
GE+CIRG + KGY N+PEA ++ GW HTGDIG+ D D L +V R+KELI
Sbjct: 388 NQPGEICIRGDQIMKGYLNDPEATTRTIDKEGWLHTGDIGFIDEDDELFIVDRLKELIKY 447
Query: 416 GG 417
G
Sbjct: 448 KG 449
>sp|B7UI83|CAIC_ECO27 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=caiC PE=3 SV=1
Length = 517
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 200/431 (46%), Gaps = 24/431 (5%)
Query: 3 GVTLIGLLNQVIDQFSSKRAL---SVSGKFD-LTYSRIHELVERAASRLVAAGINAGDVV 58
G L + + + D + K AL S SG + +Y +++ + R A+ GI GD V
Sbjct: 6 GQHLRQMWDDLADVYGHKTALICESSSGVVNRYSYLELNQEINRTANLFYTLGIRKGDKV 65
Query: 59 ALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE----GNA 114
AL N EF+ + + + A P+NA +E + L +S++ LL+T A+
Sbjct: 66 ALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESTWILQNSQACLLVTSAQFYPMYQQ 125
Query: 115 AAQAAASKLNISHATATLLDADSELT--LSLAHSESDTNAIS-KLTNDPSDVALFLHTSG 171
Q A++L T L AD ++ L + + T + L+ D D A L TSG
Sbjct: 126 IQQEDATQLRHICLTDVSLPADDGVSSFTQLKNQQPATLCYAPPLSTD--DTAEILFTSG 183
Query: 172 TTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAV 231
TTSRPKGV +T NL + L + D + V+P FH+ +++F+ GA
Sbjct: 184 TTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSTGATF 243
Query: 232 TLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASL 291
L ++SA FW + KY AT +P + + ++ + ++ + + +LR + +L
Sbjct: 244 VL--VEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPLSANDQQH-RLREVMF-YLNL 299
Query: 292 APVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRP-VGQEIAILDEI 350
+ E FG +L +Y MTE T + P D P S+G+ E I D+
Sbjct: 300 SEQEKDAFCERFGVRLLTSYGMTE-TIVGIIGDRPGDKRRWP-SIGQAGFCYEAEIRDDH 357
Query: 351 GVPQEGGAKGEVCIR---GPNVTKGYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLV 406
P G GE+CI+ G + K Y NP+A GW HTGD GY D +G+ + V
Sbjct: 358 NRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFV 417
Query: 407 GRIKELINRGG 417
R +I RGG
Sbjct: 418 DRRCNMIKRGG 428
>sp|P23971|MENE_BACSU 2-succinylbenzoate--CoA ligase OS=Bacillus subtilis (strain 168)
GN=menE PE=3 SV=2
Length = 486
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 182/405 (44%), Gaps = 28/405 (6%)
Query: 16 QFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAV 75
Q + +R + +T++ + +R A +L A + GD A+ N E V A
Sbjct: 14 QLTPERIALIYEDQTVTFAELFAASKRMAEQLAAHSVRKGDTAAILLQNRAEMVYAVHAC 73
Query: 76 IRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA 135
A LN + E F L DS S LLT ++ K H T+ D
Sbjct: 74 FLLGVKAVLLNTKLSTHERLFQLEDSGSGFLLT--------DSSFEKKEYEHIVQTI-DV 124
Query: 136 DSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS 195
D EL + + + + + D + A ++TSGTT +PKGV T N S +
Sbjct: 125 D-EL---MKEAAEEIEIEAYMQMDAT--ATLMYTSGTTGKPKGVQQTFGNHYFSAVSSAL 178
Query: 196 VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255
+TE D +I LPLFH+ G L+ L S G V L RFS S + ++ T
Sbjct: 179 NLGITEQDRWLIALPLFHISG-LSALFKSVIYGMTVVLHQ--RFSVSDVLHSINRHEVTM 235
Query: 256 YTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF--GAPVLEAYAM 313
+AV T+ +L+ PE IR P L LEE G PV ++Y M
Sbjct: 236 ISAVQTMLASLLEETNRCPES-------IRCILLGGGPAPLPLLEECREKGFPVFQSYGM 288
Query: 314 TEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGY 373
TE + + PE K GS G+P+ ++ G E GE+ ++GPNV K Y
Sbjct: 289 TETCSQIVTLS-PEFSMEKLGSAGKPLFSCEIKIERDGQVCEPYEHGEIMVKGPNVMKSY 347
Query: 374 KNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGN 418
N AN+++F GW TGD+GY D++G+L+++ R +LI GG
Sbjct: 348 FNRESANEASFQNGWLKTGDLGYLDNEGFLYVLDRRSDLIISGGE 392
>sp|A7Z809|MENE_BACA2 2-succinylbenzoate--CoA ligase OS=Bacillus amyloliquefaciens
(strain FZB42) GN=menE PE=3 SV=1
Length = 487
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 185/406 (45%), Gaps = 29/406 (7%)
Query: 16 QFSSKRALSVSGKFDLTYSRIHELVERAASRLVA-AGINAGDVVALTFPNTVEFVIMFLA 74
Q + +R + +T+ ++ ++ A+RL + GD A+ N E V A
Sbjct: 14 QLTPERIALIFENKQMTFRELYHASKQMAARLSKYCSLKKGDRAAILLSNRPEMVYAVHA 73
Query: 75 VIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLD 134
A A LN + E F L DS++KLLL + + A AT D
Sbjct: 74 CFLLGAEAVLLNTKLSKQERLFQLEDSQAKLLLM--------EDGFCREEYESAVATA-D 124
Query: 135 ADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIK 194
D EL A D + +T D D A ++TSGTT RPKGV T N +S +
Sbjct: 125 VD-ELQ---AEEAGDIEPEAYVTLD--DTATLMYTSGTTGRPKGVQQTFGNHYSSAVSSA 178
Query: 195 SVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNAT 254
+TE D +I LPLFH+ G L+ L S G V L +FS + + + T
Sbjct: 179 LNLGVTERDRWLIALPLFHISG-LSALFKSVIYGMPVVLHQ--KFSVTDVLDSISSHQVT 235
Query: 255 WYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGA--PVLEAYA 312
+AV T+ +L PE +R P L LEE PV ++Y
Sbjct: 236 IISAVQTMLSGLLAETEQCPES-------LRCILLGGGPAPLPLLEECRRKQFPVFQSYG 288
Query: 313 MTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKG 372
+TE + + PE K GS G+P+ +++ G P GE+ ++GPNV KG
Sbjct: 289 LTETCSQIVTLS-PEFSMDKLGSAGKPLFSCEIRIEKDGNPCAPFEHGEITVKGPNVMKG 347
Query: 373 YKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGN 418
Y + +AN++AF GWF TGD+GY D +G+L+++ R +LI GG
Sbjct: 348 YYHRDDANQAAFHNGWFKTGDLGYLDDEGFLYVLDRRSDLIISGGE 393
>sp|Q8GB18|CAIC_PROSL Probable crotonobetaine/carnitine-CoA ligase OS=Proteus sp. (strain
LE138) GN=caiC PE=3 SV=1
Length = 518
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 201/432 (46%), Gaps = 31/432 (7%)
Query: 6 LIGLLNQVIDQFSSKRAL---SVSGKF-DLTYSRIHELVERAASRLVAAGINAGDVVALT 61
L + + + + + K AL S GK +YS ++E + RAA+ A GI GD VAL
Sbjct: 9 LRQMWDDLAEVYDKKTALIFESAQGKVRQFSYSELNEEINRAANLFHACGIKKGDHVALH 68
Query: 62 FPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAAS 121
N EF + + + A P+NA + +E + ++ ++ ++T + Q
Sbjct: 69 LDNCPEFFFCWFGLAKIGAVMVPINARFMYEESAWIINHCQAHFVVTSDNFSPIYQPM-- 126
Query: 122 KLNISHATATLLDADSELTLSLAH------SESDTNAISKLTNDP---SDVALFLHTSGT 172
L+ H+ T L +E L SE + ++ + P D A L TSGT
Sbjct: 127 -LHDKHSPLTQLFLITENCLPTEQGVVDFLSEKAKHPVTLNHHTPLSVDDTAEILFTSGT 185
Query: 173 TSRPKGVPLTQNNLAASVSNIKSVYK--LTESDSTVIVLPLFHVHGMLAGLLSSFAAGAA 230
TS+PKGV +T NL ++ S ++ L E D + V+P FH+ L +++ GA
Sbjct: 186 TSQPKGVVITHYNL--RIAGYYSSWQNALREDDIYLTVMPAFHIDCQCTASLPAYSVGAT 243
Query: 231 VTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSAS 290
+ L ++SA W+ ++KY AT +P + + + + V+ P+ KLR + S +
Sbjct: 244 IVL--LEKYSARASWKQILKYQATVTECIPMMMRTSMAQPVS-PDEKQHKLREVMS-YLN 299
Query: 291 LAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRP-VGQEIAILDE 349
LA E +L ++ MTE + + P D P S+GRP + I D+
Sbjct: 300 LADKEKDASIERLNVRLLTSHGMTETIVGLIGD-RPGDKRRWP-SIGRPGFCYQAQIRDK 357
Query: 350 IGVPQEGGAKGEVCIR---GPNVTKGYKNNPEANKSAFL-FGWFHTGDIGYFDSDGYLHL 405
G GE+C++ G + K Y N P+A + A GW HTGD GY D +G+ +
Sbjct: 358 QNQQVPNGVVGEICVKGEAGKTLFKEYYNRPDATEKALEPDGWLHTGDYGYRDDEGFFYF 417
Query: 406 VGRIKELINRGG 417
V R +I RGG
Sbjct: 418 VDRSCNMIKRGG 429
>sp|Q3URE1|ACSF3_MOUSE Acyl-CoA synthetase family member 3, mitochondrial OS=Mus musculus
GN=Acsf3 PE=2 SV=2
Length = 583
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 190/411 (46%), Gaps = 62/411 (15%)
Query: 51 GINAGDV----VALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106
G GD+ V+ N V +V+ A + A PL + + E+++ DS S L+
Sbjct: 87 GCKVGDLQEERVSFLCSNDVSYVVAQWASWMSGGVAVPLYWKHPEAQLEYFIQDSRSSLV 146
Query: 107 LTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAH--SESDTNAISKLTNDPSDVA 164
+ E A +L + LL LT ++ H +E T + + A
Sbjct: 147 VVGQEYLERLSPLAQRLGVP-----LLP----LTPAVYHGATEKPTEQPVEESGWRDRGA 197
Query: 165 LFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSS 224
+ +TSGTT RPKG T NLAA V+ + + T++D + VLPL HVHG++ LL
Sbjct: 198 MIFYTSGTTGRPKGALSTHRNLAAVVTGLVHSWAWTKNDVILHVLPLHHVHGVVNKLLCP 257
Query: 225 FAAGA-AVTLPAAGRFSASTFWQDMIKYNA---TWYTAVPTIHQIVL---DRHVAKPE-- 275
GA V LP FSA W+ + A T + AVPT++ +L D+H +P
Sbjct: 258 LWVGATCVMLP---EFSAQQVWEKFLSSEAPQITVFMAVPTVYSKLLDYYDKHFTQPHVQ 314
Query: 276 -----PVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGP 330
++R + S SA+L +L + A G +LE Y MTE + SNPL E
Sbjct: 315 DFVRAVCKERIRLMVSGSAALPVPLLEKWRSATGHTLLERYGMTEIG-MALSNPLTEA-- 371
Query: 331 HKPGSVGRPV-GQEIAILDEIGVPQEG------------GAK---------GEVCIRGPN 368
PGSVG P+ G E+ I+ E PQ+G G K GE+ +RGP+
Sbjct: 372 RVPGSVGTPLPGVEVRIISE--NPQKGSPYIIHAEGNERGTKVTPGFEEKEGELLVRGPS 429
Query: 369 VTKGYKNNPEANKSAFLF-GWFHTGDIGYFDSDGYLHLVGRIK-ELINRGG 417
V + Y + PE KSAF GWF TGD F Y + GR ++I GG
Sbjct: 430 VFREYWDKPEETKSAFTSDGWFRTGDTAVFKDARYW-IRGRTSVDIIKTGG 479
>sp|Q67W82|4CL4_ORYSJ Probable 4-coumarate--CoA ligase 4 OS=Oryza sativa subsp. japonica
GN=4CL4 PE=2 SV=1
Length = 559
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 188/406 (46%), Gaps = 33/406 (8%)
Query: 32 TYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTP 91
+Y + EL RAA+ L G+ GDVV N EF FL R A N YTP
Sbjct: 61 SYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTP 120
Query: 92 DEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTN 151
E S + +++++T A + A+ I +D D + + + D +
Sbjct: 121 HEIHRQASAAGARVIVTEACAVEKVRGFAADRGIP---VVAVDGDFDGCVGFGEAMLDAS 177
Query: 152 AISKLTND----PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNI-----KSVYKLTES 202
I L D P DV ++SGTT PKGV LT +L SV+ ++Y
Sbjct: 178 -IEPLDADEEVHPDDVVALPYSSGTTGLPKGVMLTHRSLVTSVAQQVDGENPNLY-FRRE 235
Query: 203 DSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTI 262
D + +LPLFH++ + + LL+ AG+A+ + +F D+ + + T P +
Sbjct: 236 DVVLCLLPLFHIYSLNSVLLAGLRAGSAIVI--MRKFDLGALV-DLTRRHGV--TVAPFV 290
Query: 263 HQIVLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEA-----YAMTEA 316
IV++ +AK P L IR + AP + L++AF A + A Y MTEA
Sbjct: 291 PPIVVE--IAKSPRVTADDLASIRMVMSGAAP-MGKDLQDAFMAKIPNAVLGQGYGMTEA 347
Query: 317 THLMSSNPLPEDGPH--KPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKG 372
+++ P K GS G V E+ I+D + G GE+CIRG + KG
Sbjct: 348 GPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTGATLGRNQSGEICIRGEQIMKG 407
Query: 373 YKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
Y N+PE+ K+ GW HTGDIGY D D + +V R+KE+I G
Sbjct: 408 YLNDPESTKNTIDKGGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKG 453
>sp|Q0DV32|4CLL1_ORYSJ 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica
GN=4CLL1 PE=2 SV=2
Length = 552
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 183/388 (47%), Gaps = 33/388 (8%)
Query: 50 AGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTP 109
AG+ GD V L PN V + + F AV A +N YTP E +SD+ +KL++T
Sbjct: 81 AGVRPGDAVLLLAPNCVLYPVCFFAVTALGAVGTTVNPDYTPREIAKQVSDARAKLVITI 140
Query: 110 AEGNAAAQAAASKLNI------SHATATLLDADSELTLSLAHSESDTNAISKLTN----- 158
+ + A +L + ++A A L D+ +TL TN ++ +
Sbjct: 141 SA--LVPKIAGLRLPVILLDDDANAAAASLPPDATVTLY-------TNLVAGVKEADYRR 191
Query: 159 ---DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIV--LPLFH 213
SD A L++SGTT KGV LT N A+ + S V + LP+FH
Sbjct: 192 PPIKQSDTAALLYSSGTTGDSKGVILTHRNFIAAARMVTSDQDERREGPNVFLCFLPMFH 251
Query: 214 VHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK 273
+ G+ + G A+ A RF ++ + + ++ T VP + I L +H
Sbjct: 252 IFGLSVITYAQLHRGNAII--AMSRFDINSLMEAVQRHRVTHLFCVPPV-IIALAKHGKA 308
Query: 274 PEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLMSSNPLPEDGPHK 332
+ L+FI S +A L ++ + + F + +++ Y MTE ++S PE G +
Sbjct: 309 GKYDLSSLKFIGSGAAPLGKDVMEVVAKKFPDSEIVQGYGMTETCGIISLE-YPEKGQAR 367
Query: 333 P-GSVGRPV-GQEIAILDEIGVPQ-EGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWF 389
GS G V G E I+D + GE+C+RGPNV +GY NN +A + GW
Sbjct: 368 EFGSTGTLVSGVEAKIVDIKTLKHLPPNQVGEICVRGPNVMQGYFNNVQATEFTIKQGWL 427
Query: 390 HTGDIGYFDSDGYLHLVGRIKELINRGG 417
HTGD+GYFD G L +V R+KELI G
Sbjct: 428 HTGDLGYFDGGGQLFVVDRLKELIKYKG 455
>sp|Q6ETN3|4CL3_ORYSJ Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica
GN=4CL3 PE=2 SV=1
Length = 554
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 185/403 (45%), Gaps = 30/403 (7%)
Query: 32 TYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTP 91
TY+ + RAA+ L G+ GDVV N EF FL R A N YTP
Sbjct: 54 TYAEVESASRRAAAGLRRMGVGKGDVVMSLLRNCPEFAFSFLGAARLGAATTTANPFYTP 113
Query: 92 DEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATAT-LLDADSELTLSLAHSESDT 150
E + +++++T A + A++ + T D E LA E D
Sbjct: 114 HEVHRQAEAAGARVIVTEACAVEKVREFAAERGVPVVTVDGAFDGCVEFREVLAAEELDA 173
Query: 151 NAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNI-----KSVYKLTESDST 205
+A P DV ++SGTT PKGV LT +L SV+ ++Y ++ D
Sbjct: 174 DA----DVHPDDVVALPYSSGTTGLPKGVMLTHRSLITSVAQQVDGENPNLY-FSKDDVI 228
Query: 206 VIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQI 265
+ +LPLFH++ + + LL+ AG+ + + +F + K+N T VP I +
Sbjct: 229 LCLLPLFHIYSLNSVLLAGLRAGSTIVI--MRKFDLGALVDLVRKHNITIAPFVPPI--V 284
Query: 266 VLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEA-----YAMTEATHL 319
V +AK P L IR + AP + L++AF A + A Y MTEA +
Sbjct: 285 V---EIAKSPRVTAEDLASIRMVMSGAAP-MGKDLQDAFMAKIPNAVLGQGYGMTEAGPV 340
Query: 320 MSSNPLPEDGPH--KPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKN 375
++ P K GS G V E+ I+D + G GE+CIRG + KGY N
Sbjct: 341 LAMCLAFAKEPFKVKSGSCGTVVRNAELKIVDPDTGTSLGRNQSGEICIRGEQIMKGYLN 400
Query: 376 NPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
+PEA K+ GW HTGDIG+ D D + +V R+KE+I G
Sbjct: 401 DPEATKNTIDEDGWLHTGDIGFVDDDDEIFIVDRLKEIIKYKG 443
>sp|Q9M0X9|4CLL7_ARATH 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7
PE=1 SV=1
Length = 544
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 194/430 (45%), Gaps = 26/430 (6%)
Query: 5 TLIGLLNQVIDQFSSKRALSVSGKFD-LTYSRIHELVERAASRLVAAGINAGDVVALTFP 63
+L+ L + + SK A++ S D LT+S++ V R A GI DVV + P
Sbjct: 28 SLVSFLFRNSSSYPSKLAIADSDTGDSLTFSQLKSAVARLAHGFHRLGIRKNDVVLIFAP 87
Query: 64 NTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE-------GNAAA 116
N+ +F + FLAV N YT +E + DS K++++ + +
Sbjct: 88 NSYQFPLCFLAVTAIGGVFTTANPLYTVNEVSKQIKDSNPKIIISVNQLFDKIKGFDLPV 147
Query: 117 QAAASKLNIS---HATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTT 173
SK + + + +L D+ + LS SE I + SD A L++SGTT
Sbjct: 148 VLLGSKDTVEIPPGSNSKILSFDNVMELSEPVSEYPFVEIKQ-----SDTAALLYSSGTT 202
Query: 174 SRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIV--LPLFHVHGMLAGLLSSFAAGAAV 231
KGV LT N A+ + L V + LP+FHV G+ S G A
Sbjct: 203 GTSKGVELTHGNFIAASLMVTMDQDLMGEYHGVFLCFLPMFHVFGLAVITYSQLQRGNA- 261
Query: 232 TLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASL 291
L + RF +++ K+ T VP + + + + K + L++I S +A L
Sbjct: 262 -LVSMARFELELVLKNIEKFRVTHLWVVPPVFLALSKQSIVKKFDL-SSLKYIGSGAAPL 319
Query: 292 APVILSRLEEAF-GAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILD- 348
++ +++ Y MTE ++S P G GS G G E I+
Sbjct: 320 GKDLMEECGRNIPNVLLMQGYGMTETCGIVSVED-PRLGKRNSGSAGMLAPGVEAQIVSV 378
Query: 349 EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVG 407
E G Q +GE+ +RGPN+ KGY NNP+A K W HTGD+GYF+ DG L++V
Sbjct: 379 ETGKSQPPNQQGEIWVRGPNMMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVD 438
Query: 408 RIKELINRGG 417
RIKELI G
Sbjct: 439 RIKELIKYKG 448
>sp|A9MQH7|CAIC_SALAR Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiC PE=3
SV=1
Length = 517
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 192/435 (44%), Gaps = 42/435 (9%)
Query: 10 LNQVIDQ----FSSKRAL---SVSGKFD-LTYSRIHELVERAASRLVAAGINAGDVVALT 61
L Q+ D + K AL S +G+ +Y+ ++ + R A+ + GI GD VAL
Sbjct: 9 LRQMWDDLAGIYEDKTALIFESCAGEVQHFSYASLNREINRTANLFYSLGIRKGDNVALH 68
Query: 62 FPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE----GNAAAQ 117
N EF+ + + + A P+NA +E + L +S + LL+T A Q
Sbjct: 69 LDNCPEFIFCWFGLAKIGAIVVPINARLLREESAWILQNSRTSLLVTSAPFYPMYRQIQQ 128
Query: 118 AAASKLNISHATATLLDADSELT--LSLAHSESDTNAIS-KLTNDPSDVALFLHTSGTTS 174
+ L+ L A+ ++ +L + D + LT P D A L TSGTTS
Sbjct: 129 EGRTPLSHICLIGPTLPAEEGVSHFYTLKAQQPDVLLYTPPLT--PDDTAEILFTSGTTS 186
Query: 175 RPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234
RPKGV +T NL + L E D + V+P FH+ +++F+ GA L
Sbjct: 187 RPKGVVITHYNLRFAGYYSSWQCALREDDVYLTVMPAFHIDCQCTAAMAAFSVGATFVL- 245
Query: 235 AAGRFSASTFWQDMIKYNATWYTAVPTIHQIVL-------DRHVAKPEPVYPKLRFIRSC 287
++SA FW + KY AT +P + + ++ DRH E ++
Sbjct: 246 -IEKYSARAFWGQVRKYCATVTECIPMMIRTLMTQTPAADDRHHCLREVMF--------- 295
Query: 288 SASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRP-VGQEIAI 346
+L+ E FG + +Y MTE T + P D P S+GRP E I
Sbjct: 296 YLNLSVQEKEAFTERFGVRLFTSYGMTE-TIVGIIGDRPGDKRRWP-SIGRPGFCYEAEI 353
Query: 347 LDEIGVPQEGGAKGEVCIRG-PNVT--KGYKNNPEANKSAFL-FGWFHTGDIGYFDSDGY 402
+E G GE+CI+G P T K Y P+A A GW HTGD GY D +G+
Sbjct: 354 RNEQNRALPPGEIGEICIKGIPGKTLFKSYFERPDATAKALEPNGWLHTGDSGYRDEEGF 413
Query: 403 LHLVGRIKELINRGG 417
+ V R ++ RGG
Sbjct: 414 FYFVDRRCNMVKRGG 428
>sp|Q8H151|AAE13_ARATH Malonate--CoA ligase OS=Arabidopsis thaliana GN=AAE13 PE=1 SV=1
Length = 544
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 179/375 (47%), Gaps = 33/375 (8%)
Query: 55 GDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA 114
G + + + EFV L + A PL +Y E ++DS+ LLL+ + +
Sbjct: 66 GARIGIVAKPSAEFVAGVLGTWFSGGVAVPLALSYPEAELLHVMNDSDISLLLSTEDHSE 125
Query: 115 AAQAAASKLNIS-HATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTT 173
+ A+K H ++++ SE + A K +DP AL ++TSGTT
Sbjct: 126 TMKTIAAKSGARFHLIPPVVNSTSETVACNQFQDDSFEAEGKFLDDP---ALIVYTSGTT 182
Query: 174 SRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVT- 232
+PKGV T N++ + V + ++ T +D + LPL HVHG+ L + A + V
Sbjct: 183 GKPKGVVHTHNSINSQVRMLTEAWEYTSADHFLHCLPLHHVHGLFNALFAPLYARSLVEF 242
Query: 233 LPAAGRFSASTFWQ----------DMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYP--- 279
LP +FS S W+ + + T +T VPT++ ++ + A + +
Sbjct: 243 LP---KFSVSGIWRRWRESYPVNDEKTNDSITVFTGVPTMYTRLIQGYEAMDKEMQDSSA 299
Query: 280 ----KLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGS 335
KLR + S S++L ++ + E G +LE Y MTE M SNPL G G+
Sbjct: 300 FAARKLRLMMSGSSALPRPVMHQWESITGHRLLERYGMTEFVMAM-SNPL--RGARNAGT 356
Query: 336 VGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF-GWFHTGD 393
VG+P+ G E I ++ + GE+C++ P++ K Y N PE K +F G+F TGD
Sbjct: 357 VGKPLPGVEAKIKED---ENDANGVGEICVKSPSLFKEYWNLPEVTKESFTEDGYFKTGD 413
Query: 394 IGYFDSDGYLHLVGR 408
G D DGY ++GR
Sbjct: 414 AGRVDEDGYYVILGR 428
>sp|Q9S777|4CL3_ARATH 4-coumarate--CoA ligase 3 OS=Arabidopsis thaliana GN=4CL3 PE=1 SV=1
Length = 561
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 182/403 (45%), Gaps = 28/403 (6%)
Query: 32 TYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTP 91
TY H + R AS L GI GDV+ + N+ EFV F+ A + N YT
Sbjct: 77 TYGETHLICRRVASGLYKLGIRKGDVIMILLQNSAEFVFSFMGASMIGAVSTTANPFYTS 136
Query: 92 DEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSE-----LTLSLAHS 146
E L S +KL++T ++ KL TL+ D L S +
Sbjct: 137 QELYKQLKSSGAKLIITHSQ-------YVDKLKNLGENLTLITTDEPTPENCLPFSTLIT 189
Query: 147 ESDTNAISKLTN-DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVS-----NIKSVYKLT 200
+ +TN + + D A +SGTT PKGV LT +L SV+ + ++Y L
Sbjct: 190 DDETNPFQETVDIGGDDAAALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGDNPNLY-LK 248
Query: 201 ESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVP 260
+D + VLPLFH++ + + LL+S +GA V L +F + ++ T VP
Sbjct: 249 SNDVILCVLPLFHIYSLNSVLLNSLRSGATVLL--MHKFEIGALLDLIQRHRVTIAALVP 306
Query: 261 TIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVL-EAYAMTEATHL 319
+ I L ++ +RF+ S +A L + L +L + Y MTEA +
Sbjct: 307 PL-VIALAKNPTVNSYDLSSVRFVLSGAAPLGKELQDSLRRRLPQAILGQGYGMTEAGPV 365
Query: 320 --MSSNPLPEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKN 375
MS E P K GS G V E+ ++ E + GE+CIRG + K Y N
Sbjct: 366 LSMSLGFAKEPIPTKSGSCGTVVRNAELKVVHLETRLSLGYNQPGEICIRGQQIMKEYLN 425
Query: 376 NPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
+PEA + GW HTGDIGY D D + +V R+KE+I G
Sbjct: 426 DPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKG 468
>sp|Q58DN7|ACSF3_BOVIN Acyl-CoA synthetase family member 3, mitochondrial OS=Bos taurus
GN=ACSF3 PE=2 SV=1
Length = 586
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 185/416 (44%), Gaps = 65/416 (15%)
Query: 46 RLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKL 105
R A G + V+L N V FV+ A + A PL + + E+++ DS S +
Sbjct: 87 RACADGDLREERVSLLCSNDVSFVVAQWAAWMSGGVAVPLYRKHPRAQLEYFIQDSRSSV 146
Query: 106 LLTPAEGNAAAQAAASKLNISHATATL-----LDADSELTLSLAHSESDTNAISKLTNDP 160
+L E A KL + + D E L L + D A
Sbjct: 147 VLAGPEHVELLSPVAQKLGVPLLPLPPTVYHGVAEDPEEGLVLERNWRDRGA-------- 198
Query: 161 SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAG 220
+ ++TSGTT RPKGV T +N+ A V+ + + T+ D + VLPL HVHG++
Sbjct: 199 ----MIIYTSGTTGRPKGVLSTHDNIRAVVTGLVHKWAWTKDDVILHVLPLHHVHGVVNK 254
Query: 221 LLSSFAAGA-AVTLPAAGRFSASTFWQDMIKYNATW---YTAVPTIHQIVL---DRHVAK 273
LL GA V LP FSA W+ + A + AVPTI+ ++ D+H +
Sbjct: 255 LLCPLWVGATCVMLP---EFSAQLVWEKFLSSEAPQINVFMAVPTIYSKLMDYYDKHFTQ 311
Query: 274 PE-------PVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLP 326
P K+R + S SA+L +L + + G +LE Y MTE + SNPL
Sbjct: 312 PHVQDFVRAVCEEKIRLMVSGSAALPLPVLEKWKGITGHTLLERYGMTEIGMAL-SNPL- 369
Query: 327 EDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGA----------------------KGEVC 363
PGSVG P+ G E+ I+ E PQ+ + +GE+
Sbjct: 370 -TAARLPGSVGTPLPGVEVRIVSE--NPQKDSSPYLIHAEGSEENTKVTPGFEEKEGELL 426
Query: 364 IRGPNVTKGYKNNPEANKSAFLF-GWFHTGDIGYFDSDGYLHLVGRIK-ELINRGG 417
+RGP+V + Y + PE K+AF GWF TGD F DG + GR ++I GG
Sbjct: 427 VRGPSVFREYWDKPEETKAAFTSDGWFKTGDTVVF-KDGCYWIRGRTSVDIIKSGG 481
>sp|B7LWM8|CAIC_ESCF3 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=caiC PE=3 SV=2
Length = 517
Score = 141 bits (356), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 186/403 (46%), Gaps = 30/403 (7%)
Query: 32 TYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTP 91
+Y +++ + R A+ GI GD VAL N EF+ + +++ A P+NA
Sbjct: 39 SYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLVKIGAIMVPINARLLR 98
Query: 92 DEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDADSELT--LSLAH 145
+E + L +S++ LL+T A+ Q A++L T L AD ++ L +
Sbjct: 99 EESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVELPADDGVSSFTQLKN 158
Query: 146 SESDTNAIS-KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDS 204
+ T + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 159 QQPVTLCYAPPLSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDV 216
Query: 205 TVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQ 264
+ V+P FH+ +++F+AGA L ++SA FW + KY AT +P + +
Sbjct: 217 YLTVMPAFHIDCQCTAAMAAFSAGATFVL--VEKYSARAFWGQVQKYRATVTECIPMMIR 274
Query: 265 IVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLE-----EAFGAPVLEAYAMTEATHL 319
++ +P V + +R L LS E E FG +L +Y MTE T +
Sbjct: 275 TLM----VQPPSVNDRQHHLREVMFYLN---LSEQEKDAFCERFGVRLLTSYGMTE-TIV 326
Query: 320 MSSNPLPEDGPHKPGSVGRP-VGQEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR E I D+ P G GE+CI+ G + K Y
Sbjct: 327 GIIGDRPGDKRRWP-SIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFL 385
Query: 376 NPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
NP+A GW HTGD GY D +G+ + V R +I RGG
Sbjct: 386 NPQATARVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGG 428
>sp|B7MNP4|CAIC_ECO81 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O81 (strain ED1a) GN=caiC PE=3 SV=2
Length = 517
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 198/436 (45%), Gaps = 34/436 (7%)
Query: 3 GVTLIGLLNQVIDQFSSKRAL---SVSGKFD-LTYSRIHELVERAASRLVAAGINAGDVV 58
G L + + + D + K AL S SG + +Y +++ + R A+ GI GD V
Sbjct: 6 GQHLRQMWDDLADVYGHKTALICESSSGVVNRYSYLELNQEINRTANLFYVLGIRKGDKV 65
Query: 59 ALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE----GNA 114
AL N EF+ + + + A P+NA +E + L +S++ LL+T A+
Sbjct: 66 ALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESTWILQNSQACLLVTSAQFYPMYQQ 125
Query: 115 AAQAAASKLNISHATATLLDADSELT--LSLAHSESDTNAIS-KLTNDPSDVALFLHTSG 171
Q AS+L T L AD ++ L + + T + L+ D D A L TSG
Sbjct: 126 IQQEDASELRHICLTDMALPADDGVSSFTQLKNQQPATLCYAPPLSTD--DTAEILFTSG 183
Query: 172 TTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAV 231
TTSRPKGV +T NL + L + D + V+P FH+ +++F+AGA
Sbjct: 184 TTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATF 243
Query: 232 TLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASL 291
L ++SA FW + KY AT +P + + ++ +P + +R L
Sbjct: 244 VL--VEKYSARAFWGQVQKYRATITECIPMMIRTLM----VQPPSANDQQHRLREVMFYL 297
Query: 292 APVILSRLE-----EAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRP-VGQEIA 345
LS E E FG +L +Y MTE T + P D P S+GR E
Sbjct: 298 N---LSEQEKDAFCERFGVRLLTSYGMTE-TIVGIIGDRPGDKRRWP-SIGRAGFCYEAE 352
Query: 346 ILDEIGVPQEGGAKGEVCIR---GPNVTKGYKNNPEANKSAF-LFGWFHTGDIGYFDSDG 401
I D+ P G GE+CI+ G + K Y NP+A GW HTGD GY D +G
Sbjct: 353 ICDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEG 412
Query: 402 YLHLVGRIKELINRGG 417
+ + V R +I RGG
Sbjct: 413 FFYFVDRRCNMIKRGG 428
>sp|Q838K1|MENE_ENTFA 2-succinylbenzoate--CoA ligase OS=Enterococcus faecalis (strain
ATCC 700802 / V583) GN=menE PE=3 SV=1
Length = 485
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 168/371 (45%), Gaps = 42/371 (11%)
Query: 58 VALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQ 117
VAL N+ E LA+ LN T E F L D++ K ++ G Q
Sbjct: 51 VALFSKNSKELYFSILALWELGKELLFLNTHLTLAELTFQLKDAQVKTII----GAPETQ 106
Query: 118 AAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD---VALFLHTSGTTS 174
A +++ + S L+H E PSD VA ++TSGTT
Sbjct: 107 ALLEEISFVDVQPMIKKQHS-----LSHQE---------FQQPSDLESVASIMYTSGTTG 152
Query: 175 RPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234
+PKGV N AS + +T D + +PLFH+ G L+ ++ G ++ L
Sbjct: 153 QPKGVLQRFKNHLASARGTQENMGITAEDCWLCAVPLFHISG-LSIVVRQLVLGCSIRL- 210
Query: 235 AAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASL--- 291
+F QD+ + T + V T+ Q +L VYP+ + S L
Sbjct: 211 -YDKFDEQQVTQDLQEGRGTVISVVATMLQQLLS--------VYPEAGYSASFKGMLLGG 261
Query: 292 ---APVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQ-EIAIL 347
AP L++ EE G PV+++Y MTE + + ED K GS G+P+ +I I+
Sbjct: 262 GPIAPDKLAQCEEK-GIPVIQSYGMTETCSQVVALKF-EDAALKIGSAGQPLKDMQIKIV 319
Query: 348 DEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVG 407
DE+G Q GE+ ++GPNV GY N + K GWF TGD+GY D+ YL+LV
Sbjct: 320 DELGQEQPEKQVGEILLKGPNVVSGYLNQRQPEKWT-ADGWFKTGDMGYLDAQSYLYLVS 378
Query: 408 RIKELINRGGN 418
R+ ELI GG
Sbjct: 379 RLSELIISGGE 389
>sp|Q8XDR6|LCFA_ECO57 Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7
GN=fadD PE=3 SV=1
Length = 561
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 189/440 (42%), Gaps = 36/440 (8%)
Query: 5 TLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAA-GINAGDVVALTFP 63
+L+ + Q + +++ + A G+ +T+ ++ E A+ L G+ GD VAL P
Sbjct: 24 SLVDMFEQSVARYADQPAFVNMGEV-MTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMP 82
Query: 64 NTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKL 123
N +++ + ++RA +N YTP E E L+DS + ++ + + K
Sbjct: 83 NLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKT 142
Query: 124 NISH------------ATATLLDADSELTLSLAHSESDTNAIS---KLTND--------- 159
+ H A TL++ + L +AIS L N
Sbjct: 143 AVQHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPE 202
Query: 160 --PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVY-KLTESDSTVIV--LPLFHV 214
P D+A +T GTT KG LT N+ A++ + + Y L ++V LPL+H+
Sbjct: 203 LVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHI 262
Query: 215 HGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP 274
+ L G L R +++ KY T T V T+ +L+ +
Sbjct: 263 FALTINCLLFIELGGQNLLITNPR-DIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQ- 320
Query: 275 EPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPG 334
+ + L + V+ R + G +LE Y +TE L+S NP D + G
Sbjct: 321 QLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDID--YHSG 378
Query: 335 SVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGD 393
S+G PV E ++D+ G GE+C+RGP V GY P+A GW HTGD
Sbjct: 379 SIGLPVPSTEAKLVDDDDNEVSPGQPGELCVRGPQVMLGYWQRPDATDEIIKNGWLHTGD 438
Query: 394 IGYFDSDGYLHLVGRIKELI 413
I D +G+L +V R K++I
Sbjct: 439 IAVMDEEGFLRIVDRKKDMI 458
>sp|B7L4G0|CAIC_ECO55 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
(strain 55989 / EAEC) GN=caiC PE=3 SV=2
Length = 517
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 184/403 (45%), Gaps = 30/403 (7%)
Query: 32 TYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTP 91
+Y +++ + R A+ GI GD VAL N EF+ + + + A P+NA
Sbjct: 39 SYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLR 98
Query: 92 DEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDADSELT--LSLAH 145
+E + L +S++ LL+T A+ Q A++L T L AD ++ L +
Sbjct: 99 EESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKN 158
Query: 146 SESDTNAIS-KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDS 204
+ T + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 159 QQPATLCYAPPLSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDV 216
Query: 205 TVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQ 264
+ V+P FH+ +++F+AGA L ++SA FW + KY AT +P + +
Sbjct: 217 YLTVMPAFHIDCQCTAAMAAFSAGATFVL--VEKYSARAFWGQVQKYRATITECIPMMIR 274
Query: 265 IVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLE-----EAFGAPVLEAYAMTEATHL 319
++ +P + +R L LS E E FG +L +Y MTE T +
Sbjct: 275 TLM----VQPPSANDRQHRLREVMFYLN---LSEQEKDAFCERFGVRLLTSYGMTE-TIV 326
Query: 320 MSSNPLPEDGPHKPGSVGRP-VGQEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR E I D+ P G GE+CI+ G + K Y
Sbjct: 327 GIIGDRPSDKRRWP-SIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFL 385
Query: 376 NPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
NP+A GW HTGD GY D +G+ + V R +I RGG
Sbjct: 386 NPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGG 428
>sp|Q6GLK6|ACSF3_XENLA Acyl-CoA synthetase family member 3, mitochondrial OS=Xenopus
laevis GN=acsf3 PE=2 SV=1
Length = 578
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 186/405 (45%), Gaps = 55/405 (13%)
Query: 53 NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112
N + V+ PN +V+ AV + A A PL ++ P E ++ L DS+S L++
Sbjct: 94 NTPERVSFLCPNNSSYVVCQWAVWMSGAIAVPLCKSHPPSELKYVLQDSQSALVVAEESY 153
Query: 113 NAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDV-ALFLHTSG 171
A +L I T + L S E IS+L D D A+ ++TSG
Sbjct: 154 TNVLSPLAEQLGIPVLT---MSGSQNLHPSELLQEIK---ISQLDLDWKDRGAMIIYTSG 207
Query: 172 TTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGA-A 230
TT RPKGV T NL + V+ + + + T+ DS + VLPL HVHG++ L+ GA
Sbjct: 208 TTGRPKGVLSTHYNLYSMVTALVNEWGWTKEDSILHVLPLHHVHGVVNKLMCPLWVGATC 267
Query: 231 VTLPAAGRFSASTFWQDMIKYNA---TWYTAVPTIHQIVL---DRHVAKPE-------PV 277
V LP F T WQ + + + AVPTI+ ++ ++H
Sbjct: 268 VILP---EFCPKTVWQHFLGRDVPSINIFMAVPTIYSKLIAYYEQHFTHSNVREFVRAAC 324
Query: 278 YPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVG 337
++R + S S++L +L R +E G +LE Y MTE + +NPL GP PG+VG
Sbjct: 325 QERIRLMVSGSSALPVPVLERWQEITGHTLLERYGMTEIG-MALTNPL--HGPRVPGAVG 381
Query: 338 RPV-GQEIAILDEIGVPQEGGA----------------------KGEVCIRGPNVTKGYK 374
P+ G E+ + + P++ G +GE+ +RGP V K Y
Sbjct: 382 APLPGVEVRTVTQ--NPRKEGTSYTTHAQGDSTGTMVSVGLENREGELQVRGPAVFKEYW 439
Query: 375 NNPEANKSAFLF-GWFHTGDIGYFDSDGYLHLVGRIK-ELINRGG 417
N + AF GWF TGD + DG ++GR ++I GG
Sbjct: 440 NKRLDTQEAFTSDGWFKTGDTAMYK-DGTYWILGRTSVDIIKSGG 483
>sp|B6HYY8|CAIC_ECOSE Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
(strain SE11) GN=caiC PE=3 SV=2
Length = 517
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 186/404 (46%), Gaps = 32/404 (7%)
Query: 32 TYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTP 91
+Y +++ + R A+ GI GD VAL N EF+ + + + A P+NA
Sbjct: 39 SYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLR 98
Query: 92 DEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDADSELT--LSLAH 145
+E + L +S++ LL+T A+ Q A++L T L AD ++ L +
Sbjct: 99 EESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKN 158
Query: 146 SESDTNAISK--LTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESD 203
+ T + LT+D +++ L TSGTTSRPKGV +T NL + L + D
Sbjct: 159 QQPATLCYAPPLLTDDTAEI---LFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDD 215
Query: 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIH 263
+ V+P FH+ +++F+AGA L ++SA FW + KY AT +P +
Sbjct: 216 VYLTVMPAFHIDCQCTAAMAAFSAGATFVL--VEKYSARAFWGQVQKYRATITECIPMMI 273
Query: 264 QIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLE-----EAFGAPVLEAYAMTEATH 318
+ ++ +P + +R L LS E E FG +L +Y MTE T
Sbjct: 274 RTLM----VQPPSANDRQHRLREVMFYLN---LSEQEKDAFCERFGVRLLTSYGMTE-TI 325
Query: 319 LMSSNPLPEDGPHKPGSVGRP-VGQEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYK 374
+ P D P S+GR E I D+ P G GE+CI+ G + K Y
Sbjct: 326 VGIIGDRPGDKRRWP-SIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYF 384
Query: 375 NNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
NP+A GW HTGD GY D +G+ + V R +I RGG
Sbjct: 385 LNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGG 428
>sp|Q8FLA5|CAIC_ECOL6 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=caiC PE=3
SV=2
Length = 517
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 201/431 (46%), Gaps = 24/431 (5%)
Query: 3 GVTLIGLLNQVIDQFSSKRAL---SVSGKFD-LTYSRIHELVERAASRLVAAGINAGDVV 58
G L + + + D + K AL S SG + +Y +++ + R A+ GI GD V
Sbjct: 6 GQHLRQMWDDLADVYGHKTALICESSSGVVNRYSYLELNQEINRTANLFYTLGIRKGDKV 65
Query: 59 ALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE----GNA 114
AL N EF+ + + + A P+NA +E + L +S++ LL+T A+
Sbjct: 66 ALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESTWILQNSQACLLVTSAQFYPMYQQ 125
Query: 115 AAQAAASKLNISHATATLLDADSELT--LSLAHSESDTNAIS-KLTNDPSDVALFLHTSG 171
Q AS+L T +L AD ++ L + + T + L+ D D A L TSG
Sbjct: 126 IQQEDASQLRHICLTDMVLPADDGVSSFTQLKNQQPATLCYAPPLSTD--DTAEILFTSG 183
Query: 172 TTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAV 231
TTSRPKGV +T NL + L + D + V+P FH+ +++F+AGA
Sbjct: 184 TTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATF 243
Query: 232 TLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASL 291
L ++SA FW + KY AT +P + + ++ + ++ + + +LR + +L
Sbjct: 244 VL--VEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPLSANDQQH-RLREVMF-YLNL 299
Query: 292 APVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRP-VGQEIAILDEI 350
+ E F +L +Y MTE T + P D P S+GR E I D+
Sbjct: 300 SEQEKDAFCERFSVRLLTSYGMTE-TIVGIIGDRPGDKRRWP-SIGRAGFCYEAEIRDDH 357
Query: 351 GVPQEGGAKGEVCIR---GPNVTKGYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLV 406
P G GE+CI+ G + K Y NP+A GW HTGD GY D +G+ + V
Sbjct: 358 NRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFV 417
Query: 407 GRIKELINRGG 417
R +I RGG
Sbjct: 418 DRRCNMIKRGG 428
>sp|Q0TLV2|CAIC_ECOL5 Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=caiC PE=3 SV=2
Length = 517
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 201/431 (46%), Gaps = 24/431 (5%)
Query: 3 GVTLIGLLNQVIDQFSSKRAL---SVSGKFD-LTYSRIHELVERAASRLVAAGINAGDVV 58
G L + + + D + K AL S SG + +Y +++ + R A+ GI GD V
Sbjct: 6 GQHLRQMWDDLADVYGHKTALICESSSGVVNRYSYLELNQEINRTANLFYTLGIRKGDKV 65
Query: 59 ALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE----GNA 114
AL N EF+ + + + A P+NA +E + L +S++ LL+T A+
Sbjct: 66 ALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESTWILQNSQACLLVTSAQFYPMYQQ 125
Query: 115 AAQAAASKLNISHATATLLDADSELT--LSLAHSESDTNAIS-KLTNDPSDVALFLHTSG 171
Q AS+L T +L AD ++ L + + T + L+ D D A L TSG
Sbjct: 126 IQQEDASQLRHICLTDMVLPADDGVSSFTQLKNQQPATLCYAPPLSTD--DTAEILFTSG 183
Query: 172 TTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAV 231
TTSRPKGV +T NL + L + D + V+P FH+ +++F+AGA
Sbjct: 184 TTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATF 243
Query: 232 TLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASL 291
L ++SA FW + KY AT +P + + ++ + ++ + + +LR + +L
Sbjct: 244 VL--VEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPLSANDQQH-RLREVMF-YLNL 299
Query: 292 APVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRP-VGQEIAILDEI 350
+ E F +L +Y MTE T + P D P S+GR E I D+
Sbjct: 300 SEQEKDAFCERFSVRLLTSYGMTE-TIVGIIGDRPGDKRRWP-SIGRAGFCYEAEIRDDH 357
Query: 351 GVPQEGGAKGEVCIR---GPNVTKGYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLV 406
P G GE+CI+ G + K Y NP+A GW HTGD GY D +G+ + V
Sbjct: 358 NRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFV 417
Query: 407 GRIKELINRGG 417
R +I RGG
Sbjct: 418 DRRCNMIKRGG 428
>sp|B7M0D4|CAIC_ECO8A Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O8
(strain IAI1) GN=caiC PE=3 SV=2
Length = 517
Score = 138 bits (348), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 184/403 (45%), Gaps = 30/403 (7%)
Query: 32 TYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTP 91
+Y +++ + R A+ GI GD VAL N EF+ + + + A P+NA
Sbjct: 39 SYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLR 98
Query: 92 DEFEFYLSDSESKLLLTPAE----GNAAAQAAASKLNISHATATLLDADSELT--LSLAH 145
+E + L +S++ LL+T A+ Q A++L T L AD ++ L +
Sbjct: 99 EESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKN 158
Query: 146 SESDTNAIS-KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDS 204
+ T + L+ D D A L TSGTTSRPKGV +T NL + L + D
Sbjct: 159 QQPATLCYAPPLSTD--DTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDV 216
Query: 205 TVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQ 264
+ V+P FH+ +++F+AGA L ++SA FW + KY AT +P + +
Sbjct: 217 YLTVMPAFHIDCQCTAAMAAFSAGATFVL--VEKYSARAFWGQVQKYRATITECIPMMIR 274
Query: 265 IVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLE-----EAFGAPVLEAYAMTEATHL 319
++ +P + +R L LS E E FG +L +Y MTE T +
Sbjct: 275 TLM----VQPPSANDRQHRLREVMFYLN---LSEQEKDAFCERFGVRLLTSYGMTE-TIV 326
Query: 320 MSSNPLPEDGPHKPGSVGRP-VGQEIAILDEIGVPQEGGAKGEVCIR---GPNVTKGYKN 375
P D P S+GR E I D+ P G GE+CI+ G + K Y
Sbjct: 327 GIIGDRPGDKRRWP-SIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFL 385
Query: 376 NPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGG 417
NP+A GW HTGD GY D +G+ + V R +I RGG
Sbjct: 386 NPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGG 428
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,097,540
Number of Sequences: 539616
Number of extensions: 6651343
Number of successful extensions: 21069
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 18057
Number of HSP's gapped (non-prelim): 1381
length of query: 431
length of database: 191,569,459
effective HSP length: 120
effective length of query: 311
effective length of database: 126,815,539
effective search space: 39439632629
effective search space used: 39439632629
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)