Query 014065
Match_columns 431
No_of_seqs 177 out of 1426
Neff 10.9
Searched_HMMs 46136
Date Fri Mar 29 01:31:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014065.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014065hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 3.3E-69 7.2E-74 505.6 38.5 407 14-427 26-448 (537)
2 KOG1177 Long chain fatty acid 100.0 1.2E-69 2.6E-74 475.1 32.0 425 1-427 47-501 (596)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 1.9E-68 4.1E-73 518.1 42.3 425 2-429 9-443 (534)
4 COG0365 Acs Acyl-coenzyme A sy 100.0 8.5E-69 1.8E-73 500.0 36.2 412 9-429 14-438 (528)
5 PLN02614 long-chain acyl-CoA s 100.0 7.5E-67 1.6E-71 518.9 37.5 419 4-429 45-539 (666)
6 PTZ00342 acyl-CoA synthetase; 100.0 2.7E-66 5.9E-71 513.6 38.7 421 2-429 59-613 (746)
7 COG1022 FAA1 Long-chain acyl-C 100.0 3.6E-66 7.7E-71 488.8 35.5 408 3-428 15-491 (613)
8 PLN02736 long-chain acyl-CoA s 100.0 8.4E-66 1.8E-70 512.9 37.7 419 4-429 44-530 (651)
9 COG1021 EntE Peptide arylation 100.0 1.9E-66 4.2E-71 445.0 26.0 422 2-429 26-456 (542)
10 PRK06334 long chain fatty acid 100.0 8.4E-65 1.8E-69 495.1 40.6 420 3-429 18-452 (539)
11 PLN02861 long-chain-fatty-acid 100.0 8.1E-65 1.8E-69 504.9 38.2 418 4-429 43-536 (660)
12 PTZ00237 acetyl-CoA synthetase 100.0 3.1E-64 6.8E-69 499.6 39.7 422 5-429 60-534 (647)
13 PRK07788 acyl-CoA synthetase; 100.0 4.5E-64 9.8E-69 492.9 39.7 414 4-429 49-469 (549)
14 PRK07529 AMP-binding domain pr 100.0 4E-63 8.7E-68 491.6 44.0 420 4-429 25-487 (632)
15 PLN02654 acetate-CoA ligase 100.0 1.7E-63 3.6E-68 495.9 40.4 421 7-429 91-555 (666)
16 PLN02387 long-chain-fatty-acid 100.0 1.6E-63 3.4E-68 497.6 37.1 422 4-429 58-578 (696)
17 PLN02860 o-succinylbenzoate-Co 100.0 9.6E-63 2.1E-67 484.1 41.2 418 3-429 6-456 (563)
18 TIGR02316 propion_prpE propion 100.0 1E-62 2.3E-67 489.1 41.3 423 7-429 55-514 (628)
19 PRK13295 cyclohexanecarboxylat 100.0 4.6E-62 9.9E-67 478.2 43.9 421 3-429 23-461 (547)
20 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.4E-62 2.9E-67 489.0 40.4 422 6-429 59-517 (625)
21 PRK13382 acyl-CoA synthetase; 100.0 4E-62 8.7E-67 477.0 41.8 414 4-429 43-458 (537)
22 PTZ00216 acyl-CoA synthetase; 100.0 1.2E-62 2.7E-67 492.4 38.8 417 3-429 68-579 (700)
23 PRK05852 acyl-CoA synthetase; 100.0 4.6E-62 9.9E-67 477.1 41.7 425 3-429 15-450 (534)
24 PRK07656 long-chain-fatty-acid 100.0 1.5E-61 3.2E-66 472.3 42.9 424 1-429 2-434 (513)
25 PRK00174 acetyl-CoA synthetase 100.0 8E-62 1.7E-66 484.2 41.3 421 7-429 70-525 (637)
26 PRK09274 peptide synthase; Pro 100.0 8.2E-62 1.8E-66 477.4 38.7 419 1-429 3-462 (552)
27 PRK04319 acetyl-CoA synthetase 100.0 1.3E-61 2.7E-66 477.2 38.3 418 6-429 45-474 (570)
28 PRK05677 long-chain-fatty-acid 100.0 5E-61 1.1E-65 472.2 42.4 420 4-429 24-475 (562)
29 PLN02246 4-coumarate--CoA liga 100.0 6.8E-61 1.5E-65 469.1 42.7 422 2-429 21-454 (537)
30 PLN02430 long-chain-fatty-acid 100.0 1.3E-61 2.7E-66 481.1 37.7 421 3-429 41-536 (660)
31 PRK06839 acyl-CoA synthetase; 100.0 5.9E-61 1.3E-65 466.0 41.5 408 5-428 3-412 (496)
32 PRK08314 long-chain-fatty-acid 100.0 5.5E-61 1.2E-65 471.4 41.5 418 2-428 8-457 (546)
33 PRK06155 crotonobetaine/carnit 100.0 8.6E-61 1.9E-65 467.9 42.4 416 3-429 20-442 (542)
34 KOG1256 Long-chain acyl-CoA sy 100.0 4E-62 8.6E-67 454.4 30.9 419 3-428 74-569 (691)
35 PLN02574 4-coumarate--CoA liga 100.0 2.9E-61 6.3E-66 473.3 37.8 414 5-429 41-472 (560)
36 PRK06060 acyl-CoA synthetase; 100.0 4.9E-61 1.1E-65 483.2 39.4 401 1-428 1-406 (705)
37 PRK10524 prpE propionyl-CoA sy 100.0 9.7E-61 2.1E-65 476.0 40.2 424 6-429 55-515 (629)
38 PRK07470 acyl-CoA synthetase; 100.0 1.6E-60 3.5E-65 465.9 41.0 422 3-428 6-435 (528)
39 PF00501 AMP-binding: AMP-bind 100.0 8.4E-62 1.8E-66 461.6 30.9 400 10-416 1-417 (417)
40 PRK05857 acyl-CoA synthetase; 100.0 6.6E-61 1.4E-65 468.8 37.5 417 4-429 14-444 (540)
41 PRK06187 long-chain-fatty-acid 100.0 2.9E-60 6.2E-65 464.4 42.1 422 1-428 3-436 (521)
42 PRK03640 O-succinylbenzoic aci 100.0 3.3E-60 7.1E-65 459.2 41.4 399 4-428 2-401 (483)
43 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 5.1E-60 1.1E-64 461.9 43.1 419 3-429 22-450 (527)
44 PRK05605 long-chain-fatty-acid 100.0 4.7E-60 1E-64 466.9 43.1 420 3-429 31-487 (573)
45 PRK07769 long-chain-fatty-acid 100.0 6.9E-61 1.5E-65 476.9 37.5 415 2-429 19-505 (631)
46 PRK07638 acyl-CoA synthetase; 100.0 2.2E-60 4.9E-65 460.3 40.0 401 4-429 1-403 (487)
47 PRK07514 malonyl-CoA synthase; 100.0 7.6E-60 1.6E-64 459.1 43.0 415 3-429 2-419 (504)
48 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 9.6E-60 2.1E-64 461.1 43.3 420 4-429 22-459 (538)
49 PRK08316 acyl-CoA synthetase; 100.0 7.7E-60 1.7E-64 461.4 42.1 420 3-428 10-436 (523)
50 PRK06087 short chain acyl-CoA 100.0 9.2E-60 2E-64 462.4 41.9 421 3-429 22-452 (547)
51 PRK08180 feruloyl-CoA synthase 100.0 6.6E-60 1.4E-64 467.8 40.2 411 4-428 39-488 (614)
52 PRK06145 acyl-CoA synthetase; 100.0 1.7E-59 3.8E-64 455.6 42.1 412 4-429 2-415 (497)
53 PRK07786 long-chain-fatty-acid 100.0 9.8E-60 2.1E-64 461.3 40.5 421 3-429 16-441 (542)
54 PRK08315 AMP-binding domain pr 100.0 1.7E-59 3.7E-64 462.1 42.3 426 2-429 14-469 (559)
55 PRK08008 caiC putative crotono 100.0 2.7E-59 5.7E-64 456.4 42.5 421 3-429 6-440 (517)
56 PRK08043 bifunctional acyl-[ac 100.0 3.2E-60 6.9E-65 477.6 36.9 413 3-428 203-632 (718)
57 PRK12583 acyl-CoA synthetase; 100.0 3.7E-59 7.9E-64 459.8 43.6 426 2-429 16-470 (558)
58 PRK06188 acyl-CoA synthetase; 100.0 3.5E-59 7.5E-64 456.2 42.7 420 2-428 10-434 (524)
59 PRK12492 long-chain-fatty-acid 100.0 5.3E-59 1.1E-63 457.8 42.5 422 3-429 23-483 (562)
60 PRK08633 2-acyl-glycerophospho 100.0 1.2E-59 2.6E-64 499.6 40.3 423 4-429 615-1061(1146)
61 TIGR03443 alpha_am_amid L-amin 100.0 9.3E-60 2E-64 506.8 39.0 421 4-429 236-720 (1389)
62 PRK12476 putative fatty-acid-- 100.0 1E-59 2.2E-64 466.6 35.9 413 3-429 33-517 (612)
63 PLN02330 4-coumarate--CoA liga 100.0 6.1E-59 1.3E-63 456.0 40.4 418 3-429 27-459 (546)
64 PRK07059 Long-chain-fatty-acid 100.0 1.1E-58 2.4E-63 455.6 42.2 422 3-429 22-477 (557)
65 PRK10252 entF enterobactin syn 100.0 1.6E-59 3.5E-64 503.3 39.0 409 3-429 457-879 (1296)
66 PRK12582 acyl-CoA synthetase; 100.0 3.7E-59 8E-64 463.3 38.4 412 3-427 48-497 (624)
67 PLN03102 acyl-activating enzym 100.0 1.2E-58 2.5E-63 455.8 41.4 419 4-429 14-462 (579)
68 PLN03052 acetate--CoA ligase; 100.0 1.4E-58 3E-63 461.7 42.2 418 4-429 174-631 (728)
69 PRK03584 acetoacetyl-CoA synth 100.0 9.1E-59 2E-63 463.4 41.0 418 5-429 87-540 (655)
70 PRK12467 peptide synthase; Pro 100.0 1.1E-59 2.4E-64 536.9 38.2 408 3-429 3094-3513(3956)
71 PRK06164 acyl-CoA synthetase; 100.0 1.9E-58 4.1E-63 452.6 40.7 419 4-429 10-448 (540)
72 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.2E-58 2.6E-63 460.5 39.8 417 5-429 88-541 (652)
73 PRK09088 acyl-CoA synthetase; 100.0 1.1E-58 2.3E-63 448.9 38.2 397 11-429 2-403 (488)
74 TIGR03098 ligase_PEP_1 acyl-Co 100.0 3.2E-58 6.9E-63 449.0 41.7 415 5-429 1-436 (515)
75 TIGR02262 benz_CoA_lig benzoat 100.0 3.8E-58 8.2E-63 447.1 41.6 416 6-428 6-425 (508)
76 PRK13383 acyl-CoA synthetase; 100.0 2.7E-58 5.8E-63 448.7 40.4 400 3-428 34-437 (516)
77 PRK05851 long-chain-fatty-acid 100.0 6E-59 1.3E-63 453.4 34.8 401 6-429 4-437 (525)
78 PRK10946 entE enterobactin syn 100.0 4.8E-58 1E-62 448.5 41.2 418 3-429 24-451 (536)
79 PRK13388 acyl-CoA synthetase; 100.0 6.5E-58 1.4E-62 447.4 40.7 406 3-429 2-422 (540)
80 PRK06178 acyl-CoA synthetase; 100.0 1.5E-57 3.2E-62 448.5 42.6 422 3-428 32-483 (567)
81 PRK08751 putative long-chain f 100.0 1.8E-57 4E-62 447.4 41.0 420 4-428 25-478 (560)
82 PRK07008 long-chain-fatty-acid 100.0 1.4E-57 3E-62 445.5 39.9 419 4-429 10-451 (539)
83 PRK07867 acyl-CoA synthetase; 100.0 2.8E-57 6.1E-62 441.5 41.1 404 4-429 5-423 (529)
84 TIGR03205 pimA dicarboxylate-- 100.0 6.9E-57 1.5E-61 441.3 43.2 417 3-428 20-462 (541)
85 PRK06710 long-chain-fatty-acid 100.0 3.1E-57 6.7E-62 445.9 40.7 419 4-429 24-473 (563)
86 PRK12316 peptide synthase; Pro 100.0 3.8E-58 8.1E-63 532.0 39.8 409 4-429 2003-2423(5163)
87 PRK08974 long-chain-fatty-acid 100.0 9.7E-57 2.1E-61 442.1 42.9 420 4-428 23-473 (560)
88 PRK08279 long-chain-acyl-CoA s 100.0 6.8E-57 1.5E-61 446.3 41.5 415 2-429 35-481 (600)
89 PRK12316 peptide synthase; Pro 100.0 6.6E-58 1.4E-62 529.9 38.9 409 3-429 510-928 (5163)
90 PLN02479 acetate-CoA ligase 100.0 8.4E-57 1.8E-61 442.4 40.3 421 4-429 20-472 (567)
91 PRK05620 long-chain-fatty-acid 100.0 1.2E-56 2.7E-61 442.3 41.1 422 3-429 9-472 (576)
92 PRK07787 acyl-CoA synthetase; 100.0 5.5E-57 1.2E-61 434.5 37.7 380 13-429 9-393 (471)
93 PRK12467 peptide synthase; Pro 100.0 2.6E-57 5.6E-62 517.6 41.2 410 3-429 511-932 (3956)
94 PRK05850 acyl-CoA synthetase; 100.0 3E-57 6.5E-62 447.4 36.3 414 4-429 1-478 (578)
95 PRK05691 peptide synthase; Val 100.0 2.3E-57 5E-62 522.2 40.5 412 4-429 3720-4144(4334)
96 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.1E-56 2.3E-61 436.8 37.2 405 5-428 1-414 (502)
97 PRK06018 putative acyl-CoA syn 100.0 3.3E-56 7.2E-61 436.3 40.7 418 4-428 10-451 (542)
98 PRK13390 acyl-CoA synthetase; 100.0 1.9E-56 4.1E-61 434.5 38.0 405 12-429 5-421 (501)
99 KOG1180 Acyl-CoA synthetase [L 100.0 9.3E-58 2E-62 407.1 25.4 423 4-430 41-559 (678)
100 PRK05691 peptide synthase; Val 100.0 1.4E-56 2.9E-61 515.8 39.8 407 3-429 1130-1547(4334)
101 PRK06814 acylglycerophosphoeth 100.0 4.1E-56 8.8E-61 470.8 40.4 412 4-428 631-1051(1140)
102 PRK13391 acyl-CoA synthetase; 100.0 2.2E-55 4.9E-60 427.8 38.9 409 11-429 4-424 (511)
103 PRK09192 acyl-CoA synthetase; 100.0 6.9E-56 1.5E-60 437.0 35.2 415 2-429 19-480 (579)
104 PRK08162 acyl-CoA synthetase; 100.0 7.2E-55 1.6E-59 427.8 42.1 419 3-428 17-457 (545)
105 PRK04813 D-alanine--poly(phosp 100.0 5.2E-55 1.1E-59 425.2 39.6 406 4-428 2-416 (503)
106 TIGR01733 AA-adenyl-dom amino 100.0 1.7E-55 3.6E-60 417.4 35.2 382 32-429 1-397 (408)
107 PRK07798 acyl-CoA synthetase; 100.0 8.7E-55 1.9E-59 426.8 41.1 416 3-428 2-449 (533)
108 PRK07768 long-chain-fatty-acid 100.0 9.6E-55 2.1E-59 426.7 37.3 410 5-429 3-456 (545)
109 PRK12406 long-chain-fatty-acid 100.0 2.8E-54 6E-59 420.1 39.5 394 22-428 4-420 (509)
110 PRK08276 long-chain-fatty-acid 100.0 2.5E-54 5.5E-59 419.8 36.4 395 26-429 7-411 (502)
111 KOG1175 Acyl-CoA synthetase [L 100.0 8.3E-55 1.8E-59 406.8 30.9 418 10-429 70-517 (626)
112 PRK09029 O-succinylbenzoic aci 100.0 7.4E-54 1.6E-58 411.4 36.7 369 5-429 3-373 (458)
113 PRK07868 acyl-CoA synthetase; 100.0 1.3E-53 2.9E-58 439.4 40.0 402 2-429 445-878 (994)
114 KOG1179 Very long-chain acyl-C 100.0 1.2E-53 2.6E-58 382.4 33.5 415 2-427 75-528 (649)
115 PRK07445 O-succinylbenzoic aci 100.0 7.5E-54 1.6E-58 408.2 33.4 346 30-429 19-366 (452)
116 PLN03051 acyl-activating enzym 100.0 2.9E-53 6.3E-58 410.7 32.7 362 62-429 1-399 (499)
117 TIGR01923 menE O-succinylbenzo 100.0 3.1E-52 6.6E-57 398.4 35.2 361 32-429 1-362 (436)
118 PRK08308 acyl-CoA synthetase; 100.0 5.1E-50 1.1E-54 379.5 37.0 330 23-428 2-332 (414)
119 COG1020 EntF Non-ribosomal pep 100.0 6.7E-43 1.4E-47 349.3 36.4 406 4-429 227-638 (642)
120 PTZ00297 pantothenate kinase; 100.0 1.3E-42 2.9E-47 358.1 33.9 384 3-428 426-878 (1452)
121 PRK07824 O-succinylbenzoic aci 100.0 5.2E-36 1.1E-40 278.4 24.5 243 155-429 29-275 (358)
122 TIGR02155 PA_CoA_ligase phenyl 100.0 1.2E-33 2.5E-38 267.7 19.6 250 159-429 73-337 (422)
123 TIGR02372 4_coum_CoA_lig 4-cou 100.0 3.5E-31 7.6E-36 244.6 20.4 219 161-429 95-317 (386)
124 KOG3628 Predicted AMP-binding 100.0 3.9E-29 8.4E-34 239.2 32.1 423 4-427 770-1269(1363)
125 TIGR03335 F390_ftsA coenzyme F 100.0 2.9E-28 6.3E-33 230.9 21.2 250 158-429 83-349 (445)
126 TIGR03089 conserved hypothetic 100.0 9.8E-28 2.1E-32 205.4 19.2 209 10-254 2-227 (227)
127 COG1541 PaaK Coenzyme F390 syn 99.9 1.8E-24 3.9E-29 194.7 19.8 253 154-429 83-353 (438)
128 KOG1178 Non-ribosomal peptide 99.9 1.8E-22 3.9E-27 199.5 19.3 417 5-429 37-496 (1032)
129 KOG3628 Predicted AMP-binding 99.8 5.4E-19 1.2E-23 170.4 18.8 411 4-425 94-609 (1363)
130 TIGR02304 aden_form_hyp probab 99.7 9.2E-16 2E-20 142.4 17.6 226 163-428 101-350 (430)
131 PF04443 LuxE: Acyl-protein sy 99.2 3.6E-09 7.9E-14 96.4 22.2 240 159-423 87-361 (365)
132 PF03321 GH3: GH3 auxin-respon 98.5 4.2E-08 9.2E-13 94.7 3.1 126 278-428 266-414 (528)
133 PRK09188 serine/threonine prot 98.4 1.8E-07 3.9E-12 85.4 2.7 40 384-429 206-249 (365)
134 PLN02249 indole-3-acetic acid- 98.1 0.00011 2.5E-09 71.5 15.7 128 277-428 300-453 (597)
135 PLN02247 indole-3-acetic acid- 98.1 0.0003 6.4E-09 68.1 18.0 131 277-428 291-460 (606)
136 PLN02620 indole-3-acetic acid- 98.0 0.00036 7.8E-09 67.4 16.2 131 277-428 302-466 (612)
137 COG1541 PaaK Coenzyme F390 syn 96.2 0.045 9.8E-07 50.9 10.0 95 29-124 108-204 (438)
138 TIGR03335 F390_ftsA coenzyme F 90.8 2.5 5.5E-05 40.6 10.6 81 29-112 104-186 (445)
139 TIGR02155 PA_CoA_ligase phenyl 90.7 2.5 5.4E-05 40.3 10.5 88 29-117 93-182 (422)
140 PLN02736 long-chain acyl-CoA s 82.6 35 0.00076 34.7 14.0 101 179-287 77-180 (651)
141 TIGR03089 conserved hypothetic 81.2 12 0.00025 32.2 8.5 54 48-103 171-226 (227)
142 PF00501 AMP-binding: AMP-bind 81.2 18 0.00039 34.2 10.7 89 159-258 8-99 (417)
143 PRK02261 methylaspartate mutas 78.7 25 0.00054 27.4 8.8 56 204-260 6-62 (137)
144 KOG1176 Acyl-CoA synthetase [L 76.2 40 0.00086 33.3 11.3 89 178-269 43-136 (537)
145 PRK07656 long-chain-fatty-acid 76.2 22 0.00047 34.7 10.0 84 29-116 184-269 (513)
146 PLN03052 acetate--CoA ligase; 74.8 49 0.0011 34.3 12.3 99 159-261 188-289 (728)
147 PLN02565 cysteine synthase 74.5 50 0.0011 30.1 11.0 80 30-111 42-122 (322)
148 PRK11761 cysM cysteine synthas 73.0 50 0.0011 29.7 10.5 79 29-110 38-117 (296)
149 PTZ00237 acetyl-CoA synthetase 72.9 55 0.0012 33.3 12.0 79 179-260 91-172 (647)
150 PRK06187 long-chain-fatty-acid 72.2 27 0.0006 34.0 9.6 83 30-116 186-269 (521)
151 PLN02654 acetate-CoA ligase 72.1 62 0.0013 33.1 12.3 80 179-261 119-201 (666)
152 PLN02387 long-chain-fatty-acid 72.1 54 0.0012 33.7 11.9 102 179-288 105-209 (696)
153 PRK09274 peptide synthase; Pro 71.9 49 0.0011 32.7 11.3 79 179-260 40-121 (552)
154 PRK07788 acyl-CoA synthetase; 71.5 38 0.00082 33.5 10.4 84 180-266 74-160 (549)
155 PRK06839 acyl-CoA synthetase; 71.2 77 0.0017 30.7 12.4 85 179-266 26-114 (496)
156 PRK04319 acetyl-CoA synthetase 71.0 36 0.00077 33.9 10.1 96 18-116 204-309 (570)
157 TIGR02188 Ac_CoA_lig_AcsA acet 70.7 64 0.0014 32.6 11.9 97 159-261 70-169 (625)
158 PRK00174 acetyl-CoA synthetase 70.1 65 0.0014 32.6 11.9 97 159-261 80-179 (637)
159 PLN03102 acyl-activating enzym 68.8 42 0.0009 33.6 10.1 84 180-266 39-125 (579)
160 COG0031 CysK Cysteine synthase 68.5 63 0.0014 29.0 9.7 61 49-110 55-116 (300)
161 TIGR02370 pyl_corrinoid methyl 68.2 70 0.0015 26.7 11.1 91 203-297 85-183 (197)
162 KOG0023 Alcohol dehydrogenase, 67.8 41 0.00089 30.3 8.3 74 46-122 173-246 (360)
163 PRK08315 AMP-binding domain pr 67.8 36 0.00078 33.7 9.4 81 29-112 217-299 (559)
164 TIGR01733 AA-adenyl-dom amino 67.6 58 0.0012 30.5 10.4 97 18-117 119-226 (408)
165 PRK05857 acyl-CoA synthetase; 67.5 54 0.0012 32.4 10.5 81 179-262 40-123 (540)
166 PRK06334 long chain fatty acid 67.1 43 0.00093 33.1 9.7 84 180-266 45-128 (539)
167 PRK08316 acyl-CoA synthetase; 66.7 82 0.0018 30.8 11.6 86 179-267 35-123 (523)
168 PRK13388 acyl-CoA synthetase; 65.7 90 0.002 30.8 11.7 84 180-266 26-113 (540)
169 TIGR01217 ac_ac_CoA_syn acetoa 65.7 92 0.002 31.7 11.9 79 179-260 113-194 (652)
170 PRK12583 acyl-CoA synthetase; 65.6 44 0.00096 33.0 9.5 81 29-112 219-301 (558)
171 TIGR03098 ligase_PEP_1 acyl-Co 65.5 48 0.001 32.3 9.7 84 29-116 179-263 (515)
172 PRK07798 acyl-CoA synthetase; 64.8 1E+02 0.0022 30.2 11.9 86 179-267 27-115 (533)
173 PRK03584 acetoacetyl-CoA synth 64.8 1E+02 0.0022 31.3 12.1 95 160-261 98-195 (655)
174 PLN03051 acyl-activating enzym 64.6 40 0.00087 32.9 8.8 96 18-116 118-222 (499)
175 TIGR02316 propion_prpE propion 64.4 69 0.0015 32.4 10.7 95 160-260 66-163 (628)
176 cd06448 L-Ser-dehyd Serine deh 64.4 85 0.0019 28.5 10.3 64 47-111 43-106 (316)
177 PTZ00342 acyl-CoA synthetase; 64.3 90 0.002 32.4 11.5 102 179-288 90-208 (746)
178 PLN02246 4-coumarate--CoA liga 64.3 67 0.0014 31.7 10.4 85 179-266 49-136 (537)
179 PRK08008 caiC putative crotono 64.2 1.1E+02 0.0024 29.8 12.0 84 180-266 37-123 (517)
180 PRK05605 long-chain-fatty-acid 64.0 60 0.0013 32.3 10.1 84 180-266 57-143 (573)
181 TIGR02379 ECA_wecE TDP-4-keto- 63.9 85 0.0018 29.4 10.4 60 46-109 62-126 (376)
182 TIGR01139 cysK cysteine syntha 63.7 67 0.0015 28.9 9.5 66 46-112 47-113 (298)
183 PLN02556 cysteine synthase/L-3 63.5 58 0.0013 30.4 9.1 62 49-110 103-165 (368)
184 PRK07514 malonyl-CoA synthase; 63.4 78 0.0017 30.8 10.7 85 179-266 27-114 (504)
185 PRK13295 cyclohexanecarboxylat 63.1 1E+02 0.0022 30.4 11.6 95 160-260 38-135 (547)
186 PRK06155 crotonobetaine/carnit 63.1 72 0.0016 31.5 10.4 85 180-267 46-133 (542)
187 COG0399 WecE Predicted pyridox 62.9 57 0.0012 30.4 8.8 82 40-125 59-150 (374)
188 PRK13383 acyl-CoA synthetase; 62.7 68 0.0015 31.4 10.1 84 180-266 60-146 (516)
189 PRK07529 AMP-binding domain pr 62.6 90 0.002 31.6 11.2 96 159-259 38-136 (632)
190 PLN02614 long-chain acyl-CoA s 62.5 1.6E+02 0.0034 30.2 12.9 85 179-266 78-165 (666)
191 TIGR01923 menE O-succinylbenzo 62.4 31 0.00068 32.7 7.6 79 29-113 129-208 (436)
192 KOG1177 Long chain fatty acid 62.0 56 0.0012 31.3 8.4 82 29-113 252-335 (596)
193 cd01445 TST_Repeats Thiosulfat 61.2 29 0.00063 27.0 5.8 41 41-81 81-124 (138)
194 PLN03013 cysteine synthase 61.2 71 0.0015 30.5 9.2 80 30-111 150-230 (429)
195 PRK08314 long-chain-fatty-acid 60.0 85 0.0018 31.0 10.3 85 180-267 35-123 (546)
196 PRK11706 TDP-4-oxo-6-deoxy-D-g 59.8 1.1E+02 0.0024 28.5 10.5 58 48-109 64-126 (375)
197 TIGR01138 cysM cysteine syntha 59.4 1.3E+02 0.0029 26.9 10.9 64 47-111 50-114 (290)
198 PLN00011 cysteine synthase 59.4 88 0.0019 28.6 9.5 65 46-111 58-124 (323)
199 PLN02861 long-chain-fatty-acid 59.1 94 0.002 31.7 10.6 86 179-267 76-164 (660)
200 PRK08162 acyl-CoA synthetase; 58.7 84 0.0018 31.0 10.1 84 180-266 43-129 (545)
201 TIGR01136 cysKM cysteine synth 58.5 1.4E+02 0.003 26.9 10.7 79 30-111 34-113 (299)
202 PRK08751 putative long-chain f 58.5 84 0.0018 31.1 10.1 83 180-265 50-136 (560)
203 COG0365 Acs Acyl-coenzyme A sy 58.0 1E+02 0.0023 30.3 10.0 96 164-266 27-126 (528)
204 PRK03640 O-succinylbenzoic aci 58.0 62 0.0014 31.2 8.9 84 29-116 159-243 (483)
205 PLN02330 4-coumarate--CoA liga 57.6 1.3E+02 0.0028 29.8 11.1 84 179-265 54-140 (546)
206 COG1167 ARO8 Transcriptional r 57.0 34 0.00074 33.1 6.7 60 198-262 175-236 (459)
207 PRK07470 acyl-CoA synthetase; 56.8 1.1E+02 0.0023 30.1 10.3 83 180-265 32-117 (528)
208 PRK10524 prpE propionyl-CoA sy 56.7 1.5E+02 0.0033 29.9 11.7 95 160-260 67-164 (629)
209 PRK08308 acyl-CoA synthetase; 56.7 1.3E+02 0.0029 28.3 10.7 83 29-115 119-203 (414)
210 PRK08279 long-chain-acyl-CoA s 55.5 1.1E+02 0.0024 30.6 10.4 84 180-266 62-148 (600)
211 COG0318 CaiC Acyl-CoA syntheta 55.4 1.9E+02 0.0041 28.6 11.8 79 180-261 38-119 (534)
212 cd00640 Trp-synth-beta_II Tryp 55.3 1.4E+02 0.003 25.8 10.7 66 46-112 41-106 (244)
213 KOG0025 Zn2+-binding dehydroge 55.3 60 0.0013 28.9 7.0 65 51-115 157-222 (354)
214 PRK13391 acyl-CoA synthetase; 55.1 2E+02 0.0044 28.0 12.0 97 160-266 11-110 (511)
215 PRK05677 long-chain-fatty-acid 55.0 98 0.0021 30.7 9.8 82 180-264 49-134 (562)
216 cd02069 methionine_synthase_B1 54.9 1.1E+02 0.0025 25.9 8.7 96 200-298 87-186 (213)
217 PRK11493 sseA 3-mercaptopyruva 54.6 31 0.00068 30.7 5.6 53 29-81 200-257 (281)
218 PRK06164 acyl-CoA synthetase; 54.6 1.1E+02 0.0023 30.2 10.0 95 18-116 180-283 (540)
219 TIGR02262 benz_CoA_lig benzoat 54.6 1.3E+02 0.0029 29.2 10.6 84 180-266 30-116 (508)
220 TIGR03443 alpha_am_amid L-amin 54.5 1.2E+02 0.0025 34.3 11.2 98 159-259 249-349 (1389)
221 PRK10717 cysteine synthase A; 54.3 1.1E+02 0.0024 28.0 9.3 64 47-111 55-119 (330)
222 PRK10696 tRNA 2-thiocytidine b 54.1 1.5E+02 0.0033 25.9 10.3 78 32-109 4-94 (258)
223 PF01041 DegT_DnrJ_EryC1: DegT 53.9 77 0.0017 29.4 8.4 89 7-110 27-121 (363)
224 PRK12406 long-chain-fatty-acid 53.4 1.1E+02 0.0024 29.9 9.8 85 180-267 11-98 (509)
225 COG4009 Uncharacterized protei 53.4 41 0.00088 22.9 4.4 65 30-105 9-76 (88)
226 PRK09088 acyl-CoA synthetase; 53.3 1.7E+02 0.0037 28.3 11.1 78 180-260 22-102 (488)
227 PRK07638 acyl-CoA synthetase; 53.0 1E+02 0.0022 29.8 9.5 85 29-117 161-246 (487)
228 PRK12492 long-chain-fatty-acid 52.9 99 0.0021 30.7 9.5 81 179-262 48-132 (562)
229 PLN02860 o-succinylbenzoate-Co 52.9 84 0.0018 31.2 9.0 79 180-261 32-113 (563)
230 cd00754 MoaD Ubiquitin domain 52.6 36 0.00079 23.2 4.6 46 3-63 25-76 (80)
231 PF02729 OTCace_N: Aspartate/o 52.4 1.1E+02 0.0024 23.9 10.5 92 34-126 15-118 (142)
232 PRK08043 bifunctional acyl-[ac 52.3 1.2E+02 0.0027 31.2 10.3 91 18-111 364-464 (718)
233 PLN02430 long-chain-fatty-acid 52.3 2.8E+02 0.006 28.4 14.1 85 180-267 76-163 (660)
234 PRK08276 long-chain-fatty-acid 52.2 1.5E+02 0.0033 28.8 10.5 84 180-266 11-97 (502)
235 PLN02479 acetate-CoA ligase 52.0 1.4E+02 0.003 29.7 10.4 83 180-265 45-130 (567)
236 COG2236 Predicted phosphoribos 51.9 26 0.00056 29.1 4.2 35 29-63 5-39 (192)
237 PRK06188 acyl-CoA synthetase; 50.9 1E+02 0.0022 30.2 9.2 81 29-113 186-266 (524)
238 PRK06381 threonine synthase; V 50.9 78 0.0017 28.8 7.7 63 46-112 57-119 (319)
239 PRK07476 eutB threonine dehydr 50.4 1.4E+02 0.003 27.3 9.2 50 63-112 74-123 (322)
240 PF09269 DUF1967: Domain of un 50.3 21 0.00047 23.9 2.9 31 30-60 32-62 (69)
241 TIGR01137 cysta_beta cystathio 50.3 1.3E+02 0.0028 29.0 9.6 64 47-111 53-117 (454)
242 COG4821 Uncharacterized protei 49.9 48 0.001 27.5 5.3 56 35-111 84-140 (243)
243 COG1064 AdhP Zn-dependent alco 49.9 94 0.002 28.5 7.7 61 46-110 158-218 (339)
244 PF06277 EutA: Ethanolamine ut 49.7 1.8E+02 0.0039 28.0 9.7 63 4-67 353-420 (473)
245 PRK13382 acyl-CoA synthetase; 49.4 1.8E+02 0.0038 28.7 10.6 83 180-265 68-153 (537)
246 cd01449 TST_Repeat_2 Thiosulfa 48.4 50 0.0011 24.5 5.2 52 30-81 47-104 (118)
247 PRK06087 short chain acyl-CoA 48.3 1.1E+02 0.0025 30.1 9.1 77 180-259 49-128 (547)
248 PRK05620 long-chain-fatty-acid 47.9 2.9E+02 0.0064 27.4 12.0 85 179-266 37-125 (576)
249 TIGR03595 Obg_CgtA_exten Obg f 47.8 24 0.00052 23.6 2.9 19 43-61 45-63 (69)
250 PRK06178 acyl-CoA synthetase; 47.8 1.6E+02 0.0036 29.1 10.2 85 180-267 58-145 (567)
251 PRK07059 Long-chain-fatty-acid 47.6 1.8E+02 0.0038 28.8 10.4 84 179-265 47-133 (557)
252 cd01561 CBS_like CBS_like: Thi 47.4 2.1E+02 0.0045 25.6 10.6 65 47-112 44-109 (291)
253 TIGR03588 PseC UDP-4-keto-6-de 47.3 1.2E+02 0.0027 28.3 8.7 66 41-109 55-128 (380)
254 PLN02723 3-mercaptopyruvate su 47.1 44 0.00096 30.4 5.5 52 30-81 238-295 (320)
255 PRK12476 putative fatty-acid-- 46.9 3.2E+02 0.0069 27.5 13.2 86 179-266 67-156 (612)
256 cd07050 BMC_EutL_repeat2 ethan 46.3 55 0.0012 22.5 4.2 40 45-84 4-44 (87)
257 PRK07786 long-chain-fatty-acid 46.0 1.7E+02 0.0038 28.8 10.0 83 180-265 42-127 (542)
258 PRK09162 hypoxanthine-guanine 45.1 66 0.0014 26.4 5.7 46 29-75 15-60 (181)
259 PRK05850 acyl-CoA synthetase; 45.1 3.2E+02 0.007 27.1 12.5 85 179-266 34-123 (578)
260 PRK06060 acyl-CoA synthetase; 45.0 1.6E+02 0.0036 30.2 9.9 81 180-263 30-113 (705)
261 PRK13237 tyrosine phenol-lyase 44.5 2.7E+02 0.0059 26.9 10.2 68 30-102 77-174 (460)
262 PTZ00216 acyl-CoA synthetase; 44.4 2.4E+02 0.0051 29.1 10.9 87 178-267 119-208 (700)
263 PRK05852 acyl-CoA synthetase; 44.4 1.5E+02 0.0032 29.2 9.2 76 180-258 43-121 (534)
264 PRK07867 acyl-CoA synthetase; 44.2 1.9E+02 0.0042 28.4 9.9 83 180-265 28-114 (529)
265 PRK06702 O-acetylhomoserine am 44.2 3E+02 0.0065 26.4 11.6 56 52-109 97-154 (432)
266 PRK06018 putative acyl-CoA syn 44.1 1.7E+02 0.0036 28.9 9.5 84 179-265 38-124 (542)
267 PF09153 DUF1938: Domain of un 43.8 63 0.0014 22.4 4.3 33 21-53 16-54 (86)
268 cd01519 RHOD_HSP67B2 Member of 43.6 64 0.0014 23.3 5.0 53 29-81 36-92 (106)
269 PLN02574 4-coumarate--CoA liga 43.6 2E+02 0.0043 28.6 10.0 84 180-266 66-153 (560)
270 PRK06382 threonine dehydratase 43.4 1.9E+02 0.0042 27.4 9.3 53 62-114 79-131 (406)
271 PRK13390 acyl-CoA synthetase; 43.2 3.2E+02 0.0069 26.5 12.0 79 180-261 24-105 (501)
272 PRK11658 UDP-4-amino-4-deoxy-L 43.2 1.3E+02 0.0029 28.1 8.1 62 42-107 60-126 (379)
273 TIGR03208 cyc_hxne_CoA_lg cycl 43.1 3.3E+02 0.0072 26.7 11.5 80 179-261 52-134 (538)
274 PRK12582 acyl-CoA synthetase; 41.9 1.5E+02 0.0033 29.9 9.0 79 179-260 79-165 (624)
275 TIGR03590 PseG pseudaminic aci 41.9 1.9E+02 0.0041 25.7 8.5 84 21-111 2-89 (279)
276 PLN02356 phosphateglycerate ki 41.6 2.1E+02 0.0045 27.4 8.9 64 46-110 94-158 (423)
277 PRK06814 acylglycerophosphoeth 41.1 3E+02 0.0064 30.4 11.6 96 17-115 791-896 (1140)
278 PRK07008 long-chain-fatty-acid 40.8 2.2E+02 0.0049 28.0 9.8 83 180-265 39-124 (539)
279 PRK10252 entF enterobactin syn 40.4 2.2E+02 0.0048 31.8 10.7 96 17-115 596-702 (1296)
280 TIGR02275 DHB_AMP_lig 2,3-dihy 40.4 1.8E+02 0.0039 28.6 9.0 79 180-261 48-129 (527)
281 COG1022 FAA1 Long-chain acyl-C 40.3 2.2E+02 0.0049 28.7 9.4 99 15-117 187-294 (613)
282 PRK10595 SOS cell division inh 40.1 1.5E+02 0.0033 23.9 6.7 66 44-109 70-141 (164)
283 PRK08974 long-chain-fatty-acid 40.1 2.1E+02 0.0045 28.3 9.5 82 180-264 48-133 (560)
284 PRK08633 2-acyl-glycerophospho 40.0 2.4E+02 0.0053 30.9 10.8 94 18-114 781-884 (1146)
285 KOG1252 Cystathionine beta-syn 39.9 2.3E+02 0.0049 26.0 8.3 61 51-111 99-159 (362)
286 PRK07787 acyl-CoA synthetase; 39.8 2E+02 0.0044 27.7 9.2 76 180-260 25-100 (471)
287 KOG1179 Very long-chain acyl-C 39.4 1.5E+02 0.0032 29.3 7.6 77 30-110 261-339 (649)
288 cd01563 Thr-synth_1 Threonine 38.5 1.5E+02 0.0033 27.0 7.6 58 55-113 70-127 (324)
289 PRK15407 lipopolysaccharide bi 38.4 1.9E+02 0.004 27.9 8.4 55 51-109 107-166 (438)
290 PRK04813 D-alanine--poly(phosp 37.4 2.2E+02 0.0047 27.6 9.1 78 180-260 27-107 (503)
291 PRK06710 long-chain-fatty-acid 37.3 2.2E+02 0.0047 28.2 9.2 81 180-263 49-132 (563)
292 KOG1250 Threonine/serine dehyd 37.0 1.7E+02 0.0036 27.4 7.2 56 57-114 117-172 (457)
293 PRK05973 replicative DNA helic 36.6 1.8E+02 0.0039 25.2 7.2 88 3-102 22-115 (237)
294 PF10411 DsbC_N: Disulfide bon 36.5 30 0.00065 22.1 1.9 21 391-411 32-52 (57)
295 COG2897 SseA Rhodanese-related 36.1 1.2E+02 0.0026 27.1 6.2 55 29-83 202-262 (285)
296 PRK15400 lysine decarboxylase 36.1 1.2E+02 0.0027 31.1 6.9 59 52-113 232-309 (714)
297 PRK05939 hypothetical protein; 35.6 3.9E+02 0.0084 25.3 10.7 56 52-109 83-138 (397)
298 PRK09029 O-succinylbenzoic aci 35.6 2.7E+02 0.0059 26.6 9.3 79 180-261 28-109 (458)
299 PRK10946 entE enterobactin syn 34.8 2.7E+02 0.0058 27.4 9.3 84 29-116 200-286 (536)
300 cd06447 D-Ser-dehyd D-Serine d 34.8 2.1E+02 0.0046 27.1 7.9 58 58-115 136-193 (404)
301 PRK08180 feruloyl-CoA synthase 34.7 2.2E+02 0.0048 28.7 8.8 79 179-260 68-154 (614)
302 cd02070 corrinoid_protein_B12- 34.6 2.7E+02 0.0059 23.2 12.7 112 184-299 64-183 (201)
303 PRK08813 threonine dehydratase 34.5 3.8E+02 0.0082 24.9 9.8 57 59-115 84-140 (349)
304 TIGR02372 4_coum_CoA_lig 4-cou 34.5 4E+02 0.0086 25.1 12.7 102 5-112 81-194 (386)
305 KOG1138 Predicted cleavage and 34.5 1.7E+02 0.0036 28.3 6.9 66 47-112 410-476 (653)
306 PLN02238 hypoxanthine phosphor 34.5 1.1E+02 0.0024 25.3 5.5 41 29-70 10-51 (189)
307 TIGR01734 D-ala-DACP-lig D-ala 34.5 3E+02 0.0064 26.7 9.5 79 180-261 25-106 (502)
308 cd01562 Thr-dehyd Threonine de 34.4 2.3E+02 0.005 25.4 8.1 55 56-111 66-120 (304)
309 PRK05638 threonine synthase; V 34.1 1.8E+02 0.004 28.0 7.6 59 56-115 113-171 (442)
310 TIGR00649 MG423 conserved hypo 34.0 2.9E+02 0.0064 26.3 9.0 62 51-112 315-385 (422)
311 PRK09192 acyl-CoA synthetase; 34.0 4E+02 0.0087 26.5 10.5 87 179-267 48-143 (579)
312 PRK06721 threonine synthase; R 33.4 2.3E+02 0.005 26.2 8.0 51 62-112 81-132 (352)
313 PHA02885 putative interleukin 32.9 1.6E+02 0.0034 21.3 5.0 39 386-429 48-86 (135)
314 PF13580 SIS_2: SIS domain; PD 32.6 1.6E+02 0.0035 22.8 5.9 54 32-85 80-136 (138)
315 TIGR00715 precor6x_red precorr 32.6 1.7E+02 0.0038 25.6 6.6 54 55-111 150-206 (256)
316 TIGR00936 ahcY adenosylhomocys 32.3 4.5E+02 0.0097 25.0 11.1 60 54-113 31-92 (406)
317 TIGR03205 pimA dicarboxylate-- 32.3 3E+02 0.0065 27.1 9.2 78 180-260 46-126 (541)
318 PRK08574 cystathionine gamma-s 31.9 4.4E+02 0.0095 24.8 11.4 56 52-109 89-144 (385)
319 PRK08246 threonine dehydratase 31.7 3.9E+02 0.0085 24.2 9.7 58 54-112 67-124 (310)
320 PRK10719 eutA reactivating fac 31.5 4.1E+02 0.0089 25.7 9.1 62 5-67 355-421 (475)
321 PF03744 BioW: 6-carboxyhexano 31.0 67 0.0014 27.7 3.6 42 356-411 172-223 (239)
322 TIGR02035 D_Ser_am_lyase D-ser 30.9 2.5E+02 0.0055 26.9 7.8 58 58-115 154-211 (431)
323 PRK06145 acyl-CoA synthetase; 30.8 3.4E+02 0.0075 26.2 9.3 80 180-262 27-109 (497)
324 PF11142 DUF2917: Protein of u 30.5 1.6E+02 0.0034 19.3 4.8 34 360-407 25-58 (63)
325 TIGR01127 ilvA_1Cterm threonin 30.4 3.4E+02 0.0074 25.4 8.7 54 60-113 52-105 (380)
326 PRK09177 xanthine-guanine phos 30.4 1.5E+02 0.0033 23.6 5.5 41 29-71 8-48 (156)
327 PF00291 PALP: Pyridoxal-phosp 30.2 3.7E+02 0.0079 24.0 8.7 57 54-111 55-111 (306)
328 PF08734 GYD: GYD domain; Int 30.2 2E+02 0.0044 20.4 7.7 65 34-98 16-90 (91)
329 PRK07409 threonine synthase; V 30.2 2.6E+02 0.0056 25.9 7.7 52 62-113 84-136 (353)
330 cd01019 ZnuA Zinc binding prot 30.0 3E+02 0.0065 24.6 7.9 84 33-116 156-242 (286)
331 PRK06110 hypothetical protein; 29.8 4.3E+02 0.0094 24.0 9.6 56 59-114 73-128 (322)
332 PF06543 Lac_bphage_repr: Lact 29.7 53 0.0012 19.9 2.0 25 282-306 22-46 (49)
333 PF00818 Ice_nucleation: Ice n 29.3 28 0.00061 15.6 0.6 9 310-318 1-9 (16)
334 TIGR02991 ectoine_eutB ectoine 29.3 4.4E+02 0.0095 24.0 9.0 52 61-112 72-123 (317)
335 COG5012 Predicted cobalamin bi 29.1 3.4E+02 0.0074 23.2 7.3 84 212-299 116-205 (227)
336 COG1223 Predicted ATPase (AAA+ 29.1 1.9E+02 0.0041 25.5 5.9 60 10-69 202-267 (368)
337 PRK05205 bifunctional pyrimidi 29.0 2.5E+02 0.0053 22.9 6.6 47 29-76 5-53 (176)
338 TIGR01203 HGPRTase hypoxanthin 29.0 2.7E+02 0.0059 22.4 6.8 44 31-75 3-47 (166)
339 PRK14119 gpmA phosphoglyceromu 29.0 1.6E+02 0.0034 25.2 5.8 37 31-67 150-186 (228)
340 PRK12483 threonine dehydratase 28.8 4.6E+02 0.0099 26.0 9.3 56 60-115 89-144 (521)
341 PF01436 NHL: NHL repeat; Int 28.8 80 0.0017 16.5 2.5 18 397-414 9-26 (28)
342 PLN02409 serine--glyoxylate am 28.3 4.2E+02 0.009 25.0 9.0 33 76-108 81-113 (401)
343 PRK07769 long-chain-fatty-acid 28.1 6.4E+02 0.014 25.5 12.7 85 179-265 54-142 (631)
344 PRK15399 lysine decarboxylase 27.9 2E+02 0.0043 29.6 6.8 57 52-111 232-307 (713)
345 PRK08638 threonine dehydratase 27.9 4.7E+02 0.01 24.0 8.9 54 60-113 79-132 (333)
346 PRK14072 6-phosphofructokinase 27.7 3.6E+02 0.0079 25.7 8.3 57 204-261 181-245 (416)
347 PTZ00297 pantothenate kinase; 27.5 8.2E+02 0.018 28.0 11.9 98 179-288 456-556 (1452)
348 PRK10287 thiosulfate:cyanide s 27.3 2.5E+02 0.0054 20.5 6.0 50 29-85 41-90 (104)
349 cd01448 TST_Repeat_1 Thiosulfa 27.1 1.8E+02 0.0039 21.7 5.2 41 41-81 65-106 (122)
350 TIGR01747 diampropi_NH3ly diam 27.1 3E+02 0.0064 25.9 7.5 58 56-113 94-151 (376)
351 cd00432 Ribosomal_L18_L5e Ribo 27.0 2.1E+02 0.0045 20.9 5.3 43 5-52 61-103 (103)
352 cd00617 Tnase_like Tryptophana 26.7 5.3E+02 0.012 24.8 9.3 53 52-108 89-158 (431)
353 PRK07868 acyl-CoA synthetase; 26.5 4.7E+02 0.01 28.4 9.9 81 180-266 472-555 (994)
354 PRK05851 long-chain-fatty-acid 26.5 4.3E+02 0.0092 25.9 9.1 88 18-108 151-251 (525)
355 PRK02261 methylaspartate mutas 26.4 3.1E+02 0.0067 21.3 8.8 46 66-111 18-63 (137)
356 TIGR03366 HpnZ_proposed putati 26.2 3.9E+02 0.0085 23.5 8.1 75 30-108 93-171 (280)
357 PF07722 Peptidase_C26: Peptid 25.9 1E+02 0.0023 26.2 4.0 34 73-108 31-64 (217)
358 PRK08197 threonine synthase; V 25.4 3.5E+02 0.0077 25.5 7.9 51 62-112 133-183 (394)
359 cd02067 B12-binding B12 bindin 25.4 2.9E+02 0.0062 20.5 7.8 43 69-111 17-59 (119)
360 PRK14185 bifunctional 5,10-met 25.3 5.1E+02 0.011 23.4 8.8 77 34-110 11-97 (293)
361 PRK06234 methionine gamma-lyas 25.2 5.9E+02 0.013 24.1 11.5 55 52-108 100-155 (400)
362 PRK09545 znuA high-affinity zi 25.1 3.9E+02 0.0085 24.2 7.8 83 33-117 180-267 (311)
363 TIGR00260 thrC threonine synth 25.0 3.1E+02 0.0066 25.0 7.2 78 29-112 50-128 (328)
364 TIGR01258 pgm_1 phosphoglycera 24.9 2.1E+02 0.0046 24.9 5.8 37 31-67 149-185 (245)
365 PRK07768 long-chain-fatty-acid 24.9 5.9E+02 0.013 25.0 9.8 78 29-109 170-253 (545)
366 PRK08526 threonine dehydratase 24.8 5E+02 0.011 24.7 8.7 54 62-115 74-127 (403)
367 PRK10083 putative oxidoreducta 24.8 5.2E+02 0.011 23.3 8.9 58 49-109 155-213 (339)
368 cd01137 PsaA Metal binding pro 24.8 3.8E+02 0.0083 23.9 7.6 83 33-115 152-239 (287)
369 PRK02991 D-serine dehydratase; 24.8 3.7E+02 0.0081 25.9 7.8 57 59-115 160-216 (441)
370 PRK06352 threonine synthase; V 24.6 3.8E+02 0.0083 24.8 7.8 50 63-112 82-132 (351)
371 cd06353 PBP1_BmpA_Med_like Per 24.5 4.8E+02 0.01 22.8 8.6 105 5-114 67-191 (258)
372 TIGR03201 dearomat_had 6-hydro 24.0 4.4E+02 0.0096 24.1 8.2 59 47-109 159-217 (349)
373 COG1916 Uncharacterized homolo 23.9 2.9E+02 0.0062 25.6 6.4 77 4-90 25-123 (388)
374 PRK14807 histidinol-phosphate 23.9 3.8E+02 0.0083 24.6 7.8 17 91-107 137-153 (351)
375 PLN02970 serine racemase 23.9 5.6E+02 0.012 23.4 9.2 53 61-113 80-132 (328)
376 cd01016 TroA Metal binding pro 23.6 3.9E+02 0.0084 23.7 7.4 83 33-117 136-225 (276)
377 PRK08198 threonine dehydratase 23.5 5.8E+02 0.013 24.1 9.0 60 55-115 70-129 (404)
378 TIGR02822 adh_fam_2 zinc-bindi 23.4 3.9E+02 0.0084 24.3 7.6 58 47-108 158-215 (329)
379 smart00855 PGAM Phosphoglycera 23.4 3.3E+02 0.0072 21.2 6.4 33 32-64 117-149 (155)
380 PRK07591 threonine synthase; V 23.2 3.9E+02 0.0085 25.5 7.7 78 29-112 116-193 (421)
381 cd06451 AGAT_like Alanine-glyo 23.1 5.4E+02 0.012 23.5 8.7 11 98-108 93-103 (356)
382 COG1171 IlvA Threonine dehydra 23.0 5.8E+02 0.013 23.6 8.3 62 56-119 76-137 (347)
383 PTZ00271 hypoxanthine-guanine 22.9 2.2E+02 0.0047 24.2 5.3 21 30-50 27-47 (211)
384 TIGR00060 L18_bact ribosomal p 22.8 3.4E+02 0.0073 20.4 5.7 43 6-53 71-113 (114)
385 PRK09422 ethanol-active dehydr 22.7 5.7E+02 0.012 23.0 9.3 59 48-109 156-214 (338)
386 PRK09224 threonine dehydratase 22.5 6.5E+02 0.014 24.8 9.2 53 61-113 73-125 (504)
387 PF07210 DUF1416: Protein of u 22.4 2.8E+02 0.0061 19.4 4.9 17 336-352 17-34 (85)
388 smart00450 RHOD Rhodanese Homo 22.3 2.7E+02 0.0058 19.2 5.3 40 42-81 43-82 (100)
389 PF08479 POTRA_2: POTRA domain 22.3 1.5E+02 0.0032 20.0 3.6 25 28-52 28-52 (76)
390 PRK07048 serine/threonine dehy 22.1 5.8E+02 0.013 23.2 8.4 51 61-111 77-127 (321)
391 TIGR00623 sula cell division i 22.0 3.3E+02 0.0072 22.1 5.8 19 91-109 99-117 (168)
392 PRK08329 threonine synthase; V 21.9 5.1E+02 0.011 23.9 8.1 77 29-111 83-159 (347)
393 cd01017 AdcA Metal binding pro 21.9 4.3E+02 0.0092 23.5 7.4 81 34-116 149-234 (282)
394 cd08281 liver_ADH_like1 Zinc-d 21.9 6.3E+02 0.014 23.4 8.9 57 49-109 186-243 (371)
395 PRK14665 mnmA tRNA-specific 2- 21.8 3.3E+02 0.0072 25.4 6.7 59 52-110 2-68 (360)
396 cd02067 B12-binding B12 bindin 21.8 3.4E+02 0.0074 20.1 6.1 48 212-261 11-59 (119)
397 PF00667 FAD_binding_1: FAD bi 21.6 1E+02 0.0023 26.1 3.3 28 52-79 42-69 (219)
398 PF01611 Filo_glycop: Filoviru 21.6 1.1E+02 0.0023 27.3 3.2 31 390-421 133-163 (364)
399 PF08845 SymE_toxin: Toxin Sym 21.6 1E+02 0.0022 19.7 2.4 21 44-64 30-50 (57)
400 PRK05593 rplR 50S ribosomal pr 21.5 3.3E+02 0.0072 20.5 5.4 44 5-53 73-116 (117)
401 PF07994 NAD_binding_5: Myo-in 21.2 6.1E+02 0.013 22.9 8.6 77 32-112 127-233 (295)
402 PRK15423 hypoxanthine phosphor 21.1 2.6E+02 0.0057 22.9 5.3 49 30-78 8-58 (178)
403 TIGR01501 MthylAspMutase methy 21.0 4E+02 0.0088 20.6 6.9 80 212-297 13-100 (134)
404 PRK09331 Sep-tRNA:Cys-tRNA syn 20.9 4.3E+02 0.0093 24.8 7.5 55 52-109 99-165 (387)
405 PRK07445 O-succinylbenzoic aci 20.8 6.3E+02 0.014 24.2 8.9 77 181-260 20-100 (452)
406 TIGR03392 FeS_syn_CsdA cystein 20.8 6.2E+02 0.013 23.7 8.7 13 96-108 125-137 (398)
407 PRK06815 hypothetical protein; 20.7 6.4E+02 0.014 22.9 8.6 51 62-112 74-124 (317)
408 COG3485 PcaH Protocatechuate 3 20.7 4.9E+02 0.011 22.3 6.9 42 330-375 63-104 (226)
409 PRK10874 cysteine sulfinate de 20.7 6.5E+02 0.014 23.6 8.8 10 178-187 230-239 (401)
410 PF01297 TroA: Periplasmic sol 20.5 1.9E+02 0.0041 25.2 4.8 80 33-115 127-212 (256)
411 PLN02550 threonine dehydratase 20.4 9E+02 0.019 24.4 13.0 80 30-114 136-215 (591)
412 PF02073 Peptidase_M29: Thermo 20.4 1.9E+02 0.0042 27.3 4.9 48 36-83 3-54 (398)
413 PRK15029 arginine decarboxylas 20.3 1E+03 0.022 25.0 10.4 59 52-113 242-324 (755)
414 PRK14118 gpmA phosphoglyceromu 20.3 2.7E+02 0.0058 23.8 5.5 35 31-65 149-183 (227)
415 PF08967 DUF1884: Domain of un 20.2 1.4E+02 0.0031 20.6 2.9 67 35-117 9-75 (85)
416 cd01524 RHOD_Pyr_redox Member 20.2 3.1E+02 0.0066 19.0 6.1 49 29-86 34-82 (90)
417 cd08230 glucose_DH Glucose deh 20.2 5.9E+02 0.013 23.3 8.3 54 51-106 169-223 (355)
418 PF01041 DegT_DnrJ_EryC1: DegT 20.1 5.1E+02 0.011 24.0 7.8 71 193-268 56-134 (363)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.3e-69 Score=505.61 Aligned_cols=407 Identities=37% Similarity=0.535 Sum_probs=347.7
Q ss_pred HHhcCCc-ceEEecC--CCcccHHHHHHHHHHHHHHHHHcC--CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC
Q 014065 14 IDQFSSK-RALSVSG--KFDLTYSRIHELVERAASRLVAAG--INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA 88 (431)
Q Consensus 14 a~~~p~~-~a~~~~~--~~~~Ty~el~~~~~~~a~~L~~~g--l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 88 (431)
+..++++ +.+++.+ ++.+||.|++.++.++|..|.++| +++||+|++++||++++.++++||+.+|+++.+++|.
T Consensus 26 ~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~ 105 (537)
T KOG1176|consen 26 AFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPR 105 (537)
T ss_pred ccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcc
Confidence 3344444 6777644 489999999999999999999876 7999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc-------hhhh-hhhccccccccccccCCCCC
Q 014065 89 YTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD-------SELT-LSLAHSESDTNAISKLTNDP 160 (431)
Q Consensus 89 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~ 160 (431)
+...++.+.++.++++++|++.+..+.+.+...............+.. .... ... ......... ......
T Consensus 106 ~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~ 183 (537)
T KOG1176|consen 106 LTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFED-LMPEGLPDG-IRPVSE 183 (537)
T ss_pred cCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhh-ccccCCCcc-cccCCC
Confidence 999999999999999999999999888877776644222221111000 0000 000 000000111 455667
Q ss_pred CCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCC
Q 014065 161 SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFS 240 (431)
Q Consensus 161 ~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~ 240 (431)
+|+++++|||||||.||+|.+||+++..+.........+..+++.++.+|++|.+|++..+...+..|++++..+ .|+
T Consensus 184 dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~--~f~ 261 (537)
T KOG1176|consen 184 DDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLR--KFD 261 (537)
T ss_pred CCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECC--CCC
Confidence 999999999999999999999999999887776666677779999999999999999996666777777777777 789
Q ss_pred hhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhC-CceecccCcccccCc
Q 014065 241 ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFG-APVLEAYAMTEATHL 319 (431)
Q Consensus 241 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~-~~i~~~yg~tE~~~~ 319 (431)
+..+++.|++|++|++.++|.++..+++.+. ....++++++.+.+||++++++..+++.+.++ ..+.+.||+||+++.
T Consensus 262 ~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~-~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~ 340 (537)
T KOG1176|consen 262 AELFLDLIEKYKVTHLFLVPPVLNMLAKSPI-VKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGL 340 (537)
T ss_pred HHHHHHHHHHhCEEEEEcChHHHHHHhcCCc-cCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCc
Confidence 9999999999999999999999999999873 33567999999999999999999999999997 889999999999988
Q ss_pred ccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccC-CceecCceEEE
Q 014065 320 MSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF-GWFHTGDIGYF 397 (431)
Q Consensus 320 ~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~ 397 (431)
++.+...+. ..++++|+++ +..+++.++.|+.++.++.||||++|++++.||+++|+.|++.|.+ |||+|||+|++
T Consensus 341 ~~~~~~~~e--~k~~svG~~~~g~~~~v~~e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~ 418 (537)
T KOG1176|consen 341 ITSNDWGPE--RKPGSVGRLLPGVRVKVLDETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYF 418 (537)
T ss_pred eeecCCCcc--CcccccCccccceEEEeeCCCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEE
Confidence 888765433 6899999999 7999999999999999999999999999999999999999999977 99999999999
Q ss_pred cCCCeEEEecccccceecCCeeccccceec
Q 014065 398 DSDGYLHLVGRIKELINRGGNLHESISLFL 427 (431)
Q Consensus 398 ~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~ 427 (431)
|+||+|++++|.+|+||.+|++|+|.|||.
T Consensus 419 D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~ 448 (537)
T KOG1176|consen 419 DEDGYLYIVDRSKDLIKYGGEQVSPAEIEA 448 (537)
T ss_pred cCCCeEEEecchhhheeeCCEEeCHHHHHH
Confidence 999999999999999999999999999996
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-69 Score=475.12 Aligned_cols=425 Identities=27% Similarity=0.367 Sum_probs=363.7
Q ss_pred CCcccHHHHHHHHHHhcCCcceEEec-CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhC
Q 014065 1 MEGVTLIGLLNQVIDQFSSKRALSVS-GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRAR 79 (431)
Q Consensus 1 m~~~tl~~~l~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 79 (431)
|.+.|++++++..+++.||+.|++++ ++.+.||+||.+.++.+|++|++.|+++||+|++..||+.+|+..+|||+++|
T Consensus 47 l~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG 126 (596)
T KOG1177|consen 47 LDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAG 126 (596)
T ss_pred cccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhc
Confidence 56789999999999999999999975 45789999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH-----HHHHHHhcCc-----------ccc-cccccccc----hh
Q 014065 80 ATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA-----AQAAASKLNI-----------SHA-TATLLDAD----SE 138 (431)
Q Consensus 80 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~-----~~~~~~~~~~-----------~~~-~~~~~~~~----~~ 138 (431)
.+.+++||.+...++++.|++.+++++|+.+.+... +.+...+... +.. .+.+.+.+ ..
T Consensus 127 ~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~Ga 206 (596)
T KOG1177|consen 127 LVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLPGA 206 (596)
T ss_pred eEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCCCc
Confidence 999999999999999999999999999998764322 3333322211 000 01111111 01
Q ss_pred hhhhhc---ccccccc--ccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhh
Q 014065 139 LTLSLA---HSESDTN--AISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFH 213 (431)
Q Consensus 139 ~~~~~~---~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~ 213 (431)
..+.+. ....... ........+++.+-|.|||||||.||++.+||.+++++........++..++++++..|++|
T Consensus 207 ~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~H 286 (596)
T KOG1177|consen 207 FLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLYH 286 (596)
T ss_pred eehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchHH
Confidence 111100 0001111 11223456799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcH
Q 014065 214 VHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAP 293 (431)
Q Consensus 214 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~ 293 (431)
.+|...+++.++..|++++++.+ .|++.+.+++|+++++|+++++|+++..+++.+... ..+++++|.++.||+++++
T Consensus 287 ~~G~~~~~ma~l~~gat~Vfp~~-~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~-~~~~s~lr~~vigGa~~s~ 364 (596)
T KOG1177|consen 287 CFGCVLGVMAALMHGATIVFPAP-SFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQ-QVDLSSLRKGVIGGAPVSP 364 (596)
T ss_pred HHHHHHHHHHHHHhCcEEEeeCC-CCChHHHHHHHHhhceEEEecChHHHHHHhcchhhc-cCchhhhhhheeCCCCCCH
Confidence 99999999999999999999876 789999999999999999999999999999887765 4568999999999999999
Q ss_pred HHHHHHHHHhCCc-eecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCcccc
Q 014065 294 VILSRLEEAFGAP-VLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTK 371 (431)
Q Consensus 294 ~~~~~~~~~~~~~-i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~ 371 (431)
++++.+.+.+++. +...||+||+++..+.....++......++|+.+ ..+..++|.+|..++.+..||||++|.+.+.
T Consensus 365 eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g~~v~~~~~Gel~iRGY~tMl 444 (596)
T KOG1177|consen 365 ELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDGSEVPLGTKGELLIRGYSTML 444 (596)
T ss_pred HHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCCCccccCCCceEEEEechhhe
Confidence 9999999887654 6688999999988888776666677778999999 6999999999999999999999999999999
Q ss_pred ccccCcchhhhcc-cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceec
Q 014065 372 GYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFL 427 (431)
Q Consensus 372 gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~ 427 (431)
|||++++.+.+.. .|.||+|||+|.+|++|.++++||.+|+|+.+|++|+|.|||.
T Consensus 445 ~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~ 501 (596)
T KOG1177|consen 445 GYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELED 501 (596)
T ss_pred eecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHH
Confidence 9999999888887 5689999999999999999999999999999999999999996
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-68 Score=518.13 Aligned_cols=425 Identities=39% Similarity=0.596 Sum_probs=357.0
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCCCc-ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGKFD-LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~-~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
...++.+.+.++++.+|+++|+++.+... +||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++|+
T Consensus 9 ~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Ga 88 (534)
T COG0318 9 AELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGA 88 (534)
T ss_pred ccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCE
Confidence 35789999999999999999999876432 99999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchh--hhhhhccccccccccccCCC
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSE--LTLSLAHSESDTNAISKLTN 158 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 158 (431)
+++|++|.++.+++.++++.+++++++++....+........................ ..+.................
T Consensus 89 v~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (534)
T COG0318 89 VAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGPGPDADARPV 168 (534)
T ss_pred EEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhccCCcccccCCC
Confidence 9999999999999999999999999999988555544444332111111111111000 01111111011111111226
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhc--CCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYK--LTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
.++++++++|||||||.||+|++||+++..+...+...++ ++++|++++.+|++|.+|+...++.++..|+++++.++
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~ 248 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSP 248 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCC
Confidence 7899999999999999999999999999999998888888 89999999999999999999978888999999999875
Q ss_pred CCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCC-CccEEEeccCCCcHHHHHHHHHHhC-CceecccCcc
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYP-KLRFIRSCSASLAPVILSRLEEAFG-APVLEAYAMT 314 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~-~l~~i~~~g~~~~~~~~~~~~~~~~-~~i~~~yg~t 314 (431)
..|++..++..+.++++|++.++|+++..++++...... +++ ++|.++.||+++++++++++.+.|+ ..+++.||+|
T Consensus 249 ~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~-~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~T 327 (534)
T COG0318 249 EPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDD-DLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLT 327 (534)
T ss_pred CCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCcc-ccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEeeccc
Confidence 568999999999999999999999999999888765432 234 4999999999999999999999997 5799999999
Q ss_pred cccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCC-cCCCCceeeEEEeCCccccccccCcchhhhcccC-Cceec
Q 014065 315 EATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGV-PQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF-GWFHT 391 (431)
Q Consensus 315 E~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~-~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-g~~~T 391 (431)
|+++.++...... .....+++|+|+ +++++|+|+++. ++| |++|||+++||+++.||+++++.+++.|.+ |||+|
T Consensus 328 E~~~~~~~~~~~~-~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~T 405 (534)
T COG0318 328 ETSPVVTINPPDD-LLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRT 405 (534)
T ss_pred ccCceeecCCCch-hhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHHHHhhccCCeeee
Confidence 9998777765432 124667789999 799999997754 556 889999999999999999999999998876 99999
Q ss_pred CceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 392 GDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 392 GD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+|++|++|+++|.||.+|+|+++|++|+|.|||.+.
T Consensus 406 GDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l 443 (534)
T COG0318 406 GDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVL 443 (534)
T ss_pred cceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHH
Confidence 99999999999999999999999999999999999763
No 4
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=8.5e-69 Score=500.05 Aligned_cols=412 Identities=25% Similarity=0.342 Sum_probs=342.9
Q ss_pred HHHHHHHh-cCCcceEEecCC----CcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 9 LLNQVIDQ-FSSKRALSVSGK----FDLTYSRIHELVERAASRLVA-AGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 9 ~l~~~a~~-~p~~~a~~~~~~----~~~Ty~el~~~~~~~a~~L~~-~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
+++++... .+++.|+++.+. +++||+||++.++++|+.|++ .|+ +||+|++++|+.++.++++|||+++|+++
T Consensus 14 ~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~ 92 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIP 92 (528)
T ss_pred hhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 46666653 468999998643 689999999999999999997 567 99999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccc--ccccccchhhhhhhccccccccccccCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHAT--ATLLDADSELTLSLAHSESDTNAISKLTNDP 160 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (431)
+|+.+.++.+.+...+++++++++|+++................... +.+..... ..+..... ...........+.
T Consensus 93 ~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~-~~~~~~~~-~~~~~~~~~~~~~ 170 (528)
T COG0365 93 AVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG-LWYDEAVE-KASEKFEFEPLPA 170 (528)
T ss_pred eecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc-ccHHHHhh-ccCCCCCccccCC
Confidence 99999999999999999999999999887444322111111000000 11111111 22221111 1111222333788
Q ss_pred CCeEEEEeccCCCCCCCeeeechHHHHHHHHH-HHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCC
Q 014065 161 SDVALFLHTSGTTSRPKGVPLTQNNLAASVSN-IKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRF 239 (431)
Q Consensus 161 ~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~ 239 (431)
+|+++++|||||||+||+|+++|..++..... ....+++.++|++++..+..|.+|.++.++++|..|+++++.+...+
T Consensus 171 ~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~ 250 (528)
T COG0365 171 DDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPF 250 (528)
T ss_pred CCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCC
Confidence 99999999999999999999999987766654 44567888999999999999999999999999999999998875444
Q ss_pred C-hhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccC
Q 014065 240 S-ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATH 318 (431)
Q Consensus 240 ~-~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~ 318 (431)
. +..+++.|+++++|.++..|+.++.|.+... ....++++||.+.+.||+++++.++++.+.+|++|.+.||+||+++
T Consensus 251 ~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~-~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~ 329 (528)
T COG0365 251 YSPERLWEALEKYKVTIFGTSPTFLRRLMKLGL-GEPYDLSSLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQTETGM 329 (528)
T ss_pred CCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCC-cccccchhheeeeccCCCCCHHHHHHHHHHhCCCEeccccccccCc
Confidence 4 9999999999999999999999999998876 4567899999999999999999999999999999999999999995
Q ss_pred cccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCC--ccccccccCcchhhhcccCCceecCceE
Q 014065 319 LMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGP--NVTKGYKNNPEANKSAFLFGWFHTGDIG 395 (431)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~--~~~~gy~~~~~~~~~~~~~g~~~TGD~~ 395 (431)
+...... ...+++.|+|+ |+++.++|++|++++.++ |+|+++.+ +++++||++++.+.+.+.+.||.|||.+
T Consensus 330 ~~~~~~~----~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~ 404 (528)
T COG0365 330 GFIAGRP----PVKNGSSGLPLPGYAVRRVDDEGNPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWA 404 (528)
T ss_pred cccCCCC----CcCCCCCCCCCCCceeEEECCCCCcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCcee
Confidence 5555432 33455569998 899999998899999999 99999986 9999999999999998877799999999
Q ss_pred EEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 396 YFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 396 ~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
++|+||++||+||.||+||+.|.+|+|.|||.|.
T Consensus 405 ~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l 438 (528)
T COG0365 405 ERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVL 438 (528)
T ss_pred EEccCCCEEEEeeccceEeccCeeccHHHHHHHH
Confidence 9999999999999999999999999999999874
No 5
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=7.5e-67 Score=518.93 Aligned_cols=419 Identities=20% Similarity=0.293 Sum_probs=330.6
Q ss_pred ccHHHHHHHHHHhcCCcceEEec----C--C--CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVS----G--K--FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAV 75 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~----~--~--~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 75 (431)
.|+.++|++.++++|+++|+.+. + + +.+||+||+++++++|++|+++|+++||+|+|+++|+++|++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 48999999999999999999842 1 1 24899999999999999999999999999999999999999999999
Q ss_pred HHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCc-ccccccccccchh------------hhhh
Q 014065 76 IRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNI-SHATATLLDADSE------------LTLS 142 (431)
Q Consensus 76 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------------~~~~ 142 (431)
+++|++++|+++.++.+++.++++.++++++|++.+....+......... ...++.+.+.... ..+.
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 204 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWD 204 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHH
Confidence 99999999999999999999999999999999987644333221111000 0111111110000 0011
Q ss_pred hccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh-----cCCCCCeEEEecChhhHHHH
Q 014065 143 LAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVY-----KLTESDSTVIVLPLFHVHGM 217 (431)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~ 217 (431)
.................++++++++|||||||.||||++||.+++..+......+ ++.++|++++.+|++|.+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~ 284 (666)
T PLN02614 205 EFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDR 284 (666)
T ss_pred HHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHH
Confidence 0000000000111224578999999999999999999999999998776655443 57789999999999999998
Q ss_pred HHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCC------------------------
Q 014065 218 LAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK------------------------ 273 (431)
Q Consensus 218 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~------------------------ 273 (431)
.. ....+..|+++++.+ +++..+++.+++++||+++++|++++.+.+.....
T Consensus 285 ~~-~~~~l~~G~~v~~~~---~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 360 (666)
T PLN02614 285 VI-EECFIQHGAAIGFWR---GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMK 360 (666)
T ss_pred HH-HHHHHHhCCEEEEeC---CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 65 566788999998864 48899999999999999999999999886432100
Q ss_pred --------CC------------CCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCcccCCCCCCCCCCC
Q 014065 274 --------PE------------PVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLMSSNPLPEDGPHK 332 (431)
Q Consensus 274 --------~~------------~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~~~~~~~~~~~~ 332 (431)
.. ...+++|.+++||++++++. ..+.+.+ ++++++.||+||+++..+.... .....
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~--~~~~~ 437 (666)
T PLN02614 361 KGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLP--DELDM 437 (666)
T ss_pred cCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeecc--ccCCc
Confidence 00 00168999999999999875 5666666 5899999999998865544322 12235
Q ss_pred CCCccccc-cceEEEEC-CC--CCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCeEEEecc
Q 014065 333 PGSVGRPV-GQEIAILD-EI--GVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGR 408 (431)
Q Consensus 333 ~~~~G~~~-~~~~~i~d-~~--~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR 408 (431)
.+++|+|+ +++++|+| ++ +.+++.|+.|||+|+||+++.||+++++.+++.|.+|||+|||+|++|+||+|+|+||
T Consensus 438 ~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~dG~l~i~gR 517 (666)
T PLN02614 438 LGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQPNGSMKIIDR 517 (666)
T ss_pred CCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcCCCCEEEEEc
Confidence 68999999 89999998 43 4788999999999999999999999999999999999999999999999999999999
Q ss_pred ccccee-cCCeeccccceeccc
Q 014065 409 IKELIN-RGGNLHESISLFLAK 429 (431)
Q Consensus 409 ~~d~i~-~~G~~i~~~~iE~a~ 429 (431)
+||+|| .+|++|+|.|||.+.
T Consensus 518 ~kd~ik~~~G~~V~p~eIE~~l 539 (666)
T PLN02614 518 KKNIFKLSQGEYVAVENIENIY 539 (666)
T ss_pred chhceecCCCeeecHHHHHHHH
Confidence 999999 479999999999764
No 6
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-66 Score=513.63 Aligned_cols=421 Identities=21% Similarity=0.276 Sum_probs=337.9
Q ss_pred CcccHHHHHHHHHHhcCCcceEEec--C--CCcccHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEECC
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVS--G--KFDLTYSRIHELVERAASRLVAA---GINAG-----------DVVALTFP 63 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~--~--~~~~Ty~el~~~~~~~a~~L~~~---gl~~g-----------d~V~i~~~ 63 (431)
.+.|+.++|.++++++|+++|++.. + .+.+||+|+.++++++|++|.+. |+++| |+|+|+++
T Consensus 59 ~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~ 138 (746)
T PTZ00342 59 VYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGS 138 (746)
T ss_pred ccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcC
Confidence 3678999999999999999999863 2 26899999999999999999974 99998 99999999
Q ss_pred CcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchh-----
Q 014065 64 NTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSE----- 138 (431)
Q Consensus 64 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 138 (431)
|+++|+++.+||+++|++.+|++++++.+++.++++++++++++++.+..+.+.+..........++.+......
T Consensus 139 N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~ 218 (746)
T PTZ00342 139 NSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEINI 218 (746)
T ss_pred CCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccccc
Confidence 999999999999999999999999999999999999999999999876666555544333221122222110000
Q ss_pred ----------------h-----------------------h-----------hhh-ccc-----------c-cccccccc
Q 014065 139 ----------------L-----------------------T-----------LSL-AHS-----------E-SDTNAISK 155 (431)
Q Consensus 139 ----------------~-----------------------~-----------~~~-~~~-----------~-~~~~~~~~ 155 (431)
. . +.. ... . ........
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (746)
T PTZ00342 219 NKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTNYKI 298 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccCCCC
Confidence 0 0 000 000 0 00000112
Q ss_pred CCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh--cCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEe
Q 014065 156 LTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVY--KLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTL 233 (431)
Q Consensus 156 ~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 233 (431)
....+++++.++|||||||.||||++||+++++.+....... ...+.+++++.+|++|.+++.. .+.+++.|+++++
T Consensus 299 ~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~-~~~~l~~G~~i~~ 377 (746)
T PTZ00342 299 QNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVI-AYLSFMLGGTINI 377 (746)
T ss_pred CCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHH-HHHHHHcCCEEEE
Confidence 234678999999999999999999999999998876654321 2335689999999999999976 6778999999998
Q ss_pred CCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccC----CC-----------------------------------
Q 014065 234 PAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA----KP----------------------------------- 274 (431)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----~~----------------------------------- 274 (431)
.+ . ++..+++.|++++||+++++|++|+.+.+.... .+
T Consensus 378 ~~--~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~k 454 (746)
T PTZ00342 378 WS--K-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSK 454 (746)
T ss_pred eC--C-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 75 2 789999999999999999999999998753100 00
Q ss_pred --CCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc--cceEEEEC-C
Q 014065 275 --EPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV--GQEIAILD-E 349 (431)
Q Consensus 275 --~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~i~d-~ 349 (431)
....+++|.+++||+++++++.+.++..+|+++++.||+||+++..+.... ....++++|+|+ +++++++| +
T Consensus 455 ir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~---~~~~~gsvG~p~~pg~e~ki~d~~ 531 (746)
T PTZ00342 455 IKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHA---DDNNTESIGGPISPNTKYKVRTWE 531 (746)
T ss_pred HHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccC---CCCCcccccCcCCCcEEEEEeccc
Confidence 001268999999999999999999999899999999999999876665432 235678999996 69999998 4
Q ss_pred CCCcCCCCceeeEEEeCCccccccccCcchhhhccc-CCceecCceEEEcCCCeEEEeccccccee-cCCeeccccceec
Q 014065 350 IGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELIN-RGGNLHESISLFL 427 (431)
Q Consensus 350 ~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~gR~~d~i~-~~G~~i~~~~iE~ 427 (431)
++...+.++.|||+++||+++.||+++++.|++.|. ||||+|||+|++|+||+|+|.||++|+|| .+|++|+|.+||.
T Consensus 532 ~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~ 611 (746)
T PTZ00342 532 TYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNN 611 (746)
T ss_pred ccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHH
Confidence 444555556799999999999999999999999995 89999999999999999999999999999 6899999999997
Q ss_pred cc
Q 014065 428 AK 429 (431)
Q Consensus 428 a~ 429 (431)
+.
T Consensus 612 ~l 613 (746)
T PTZ00342 612 LY 613 (746)
T ss_pred HH
Confidence 63
No 7
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=3.6e-66 Score=488.84 Aligned_cols=408 Identities=32% Similarity=0.453 Sum_probs=335.6
Q ss_pred cccHHHHHHHHHHhcCCcceEEecC---CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhC
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSG---KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRAR 79 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~---~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 79 (431)
..++.+.+.++++.+|+..++.... .+.+||+|+.+++.++|++|++.|+.+||+|+|++.|+++|+++.+||+.+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g 94 (613)
T COG1022 15 IHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALG 94 (613)
T ss_pred cccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 4578899999999999988988643 3799999999999999999999999779999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHh-cCc-cccccc---ccccc--hhhhhhhccc------
Q 014065 80 ATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASK-LNI-SHATAT---LLDAD--SELTLSLAHS------ 146 (431)
Q Consensus 80 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~-~~~-~~~~~~---~~~~~--~~~~~~~~~~------ 146 (431)
++.||++++.+.+++.++|+.++++++|++............. ... ...... ..... ....+.....
T Consensus 95 ~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (613)
T COG1022 95 AVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLF 174 (613)
T ss_pred CeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchhh
Confidence 9999999999999999999999999999998644333322221 110 000000 00000 0000000000
Q ss_pred --cccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhc-CCCCCeEEEecChhhHHHHHHHHHH
Q 014065 147 --ESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYK-LTESDSTVIVLPLFHVHGMLAGLLS 223 (431)
Q Consensus 147 --~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~ 223 (431)
.............++|+|.++|||||||.||||++||.|+++++..+....+ ..++|+.++++|+.|.+.+......
T Consensus 175 ~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~~~~~ 254 (613)
T COG1022 175 LIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAFEGGL 254 (613)
T ss_pred hhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHHHHHH
Confidence 0000111113567899999999999999999999999999999999999997 9999999999999999999875555
Q ss_pred HHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCC------------------------------
Q 014065 224 SFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK------------------------------ 273 (431)
Q Consensus 224 ~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~------------------------------ 273 (431)
.+..|.++...+ ++..+++.+++++||.++++|.+|+.+-+....+
T Consensus 255 ~~~~g~~~~~~~----~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~~ 330 (613)
T COG1022 255 ALYGGVTVLFKE----DPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLGG 330 (613)
T ss_pred HhhcceEEEecC----CHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhccc
Confidence 666666666644 8999999999999999999999999976532110
Q ss_pred -----------------CCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCc
Q 014065 274 -----------------PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSV 336 (431)
Q Consensus 274 -----------------~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~ 336 (431)
....-..+|.+++||+++++++...++.. |+++..+||+||+++..+.++. .....+++
T Consensus 331 ~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-Gi~i~eGYGlTEts~~~~v~~~---~~~~~gtv 406 (613)
T COG1022 331 GPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-GIPILEGYGLTETSAVVSVNPP---DRFVLGTV 406 (613)
T ss_pred CCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-CCCeEEEecccccccceEEccc---cCcccCCc
Confidence 00112488999999999999999988865 8999999999999999988765 56788899
Q ss_pred cccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc-CCceecCceEEEcCCCeEEEeccccccee
Q 014065 337 GRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELIN 414 (431)
Q Consensus 337 G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~gR~~d~i~ 414 (431)
|.|+ +.+++|.|+ |||+|+||.+++|||++|+.|++.|+ ||||+|||+|.+|++|+|++.||++|.||
T Consensus 407 G~p~p~~evKI~d~----------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRkK~~i~ 476 (613)
T COG1022 407 GKPLPGIEVKIADD----------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRKKELIK 476 (613)
T ss_pred CCcCCCceEEEccC----------ceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeecccceEE
Confidence 9998 799999995 99999999999999999999999997 89999999999999999999999999999
Q ss_pred -cCCeeccccceecc
Q 014065 415 -RGGNLHESISLFLA 428 (431)
Q Consensus 415 -~~G~~i~~~~iE~a 428 (431)
.+|++|.|+.||.+
T Consensus 477 l~~GknIaP~~IE~~ 491 (613)
T COG1022 477 LSNGKNIAPEPIESK 491 (613)
T ss_pred CCCCcccChHHHHHH
Confidence 79999999999974
No 8
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8.4e-66 Score=512.86 Aligned_cols=419 Identities=26% Similarity=0.376 Sum_probs=339.0
Q ss_pred ccHHHHHHHHHHhcCCcceEEe---cC-----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Q 014065 4 VTLIGLLNQVIDQFSSKRALSV---SG-----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAV 75 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~---~~-----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 75 (431)
.|+.++|+..++++|+++|+.. .+ .+.+||+||.++++++|++|+++|+++||+|+++++|+++++++++||
T Consensus 44 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 123 (651)
T PLN02736 44 GTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHAC 123 (651)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 5899999999999999999943 12 145999999999999999999999999999999999999999999999
Q ss_pred HHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchh------------hhhhh
Q 014065 76 IRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSE------------LTLSL 143 (431)
Q Consensus 76 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 143 (431)
+++|++++|+++.++.+++.++++.++++++|++.+..+.+.............+........ ..+..
T Consensus 124 ~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (651)
T PLN02736 124 SAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSK 203 (651)
T ss_pred HHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHH
Confidence 999999999999999999999999999999999877655554443322211111111110000 00000
Q ss_pred ccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHH
Q 014065 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLS 223 (431)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 223 (431)
................++++++++|||||||.||+|++||+++..++......+++.++|++++.+|++|.+++.. ++.
T Consensus 204 ~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~-~~~ 282 (651)
T PLN02736 204 LLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVN-QIV 282 (651)
T ss_pred HHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHHH-HHH
Confidence 0000000011122346789999999999999999999999999999888888888999999999999999999976 788
Q ss_pred HHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccC----------------------------CCC
Q 014065 224 SFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA----------------------------KPE 275 (431)
Q Consensus 224 ~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----------------------------~~~ 275 (431)
++..|+++++.+. ++..+++.|+++++|+++.+|++++.+.+.... ...
T Consensus 283 ~l~~G~~i~~~~~---~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (651)
T PLN02736 283 MLHYGVAVGFYQG---DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPS 359 (651)
T ss_pred HHHcCCEEEEeCC---CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 8999999988752 788999999999999999999999888654210 000
Q ss_pred C------------CC-CCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-c
Q 014065 276 P------------VY-PKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-G 341 (431)
Q Consensus 276 ~------------~~-~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~ 341 (431)
. .+ +++|.+++||+++++++.+++.+.+++++++.||+||+++.++.... .....+++|+|+ +
T Consensus 360 ~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~---~~~~~~~vG~p~pg 436 (651)
T PLN02736 360 PMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDE---GDNLSGHVGSPNPA 436 (651)
T ss_pred chHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCC---CCCCCCccCCccCc
Confidence 0 01 48999999999999999999998899999999999999876655432 234678999999 8
Q ss_pred ceEEEECC-CCC---cCCCCceeeEEEeCCccccccccCcchhhhccc-CCceecCceEEEcCCCeEEEecccccceec-
Q 014065 342 QEIAILDE-IGV---PQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINR- 415 (431)
Q Consensus 342 ~~~~i~d~-~~~---~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~- 415 (431)
++++|+|. ++. ....++.|||+++||+++.||+++++.+++.|. +|||+|||+|++|+||+++|.||.||+||+
T Consensus 437 ~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~ 516 (651)
T PLN02736 437 CEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLA 516 (651)
T ss_pred eEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEechhheEcC
Confidence 99999983 322 223335799999999999999999999998884 799999999999999999999999999995
Q ss_pred CCeeccccceeccc
Q 014065 416 GGNLHESISLFLAK 429 (431)
Q Consensus 416 ~G~~i~~~~iE~a~ 429 (431)
+|++|+|.|||.+.
T Consensus 517 ~G~~V~p~eIE~~l 530 (651)
T PLN02736 517 QGEYIAPEKIENVY 530 (651)
T ss_pred CCcEechHHHHHHH
Confidence 79999999999874
No 9
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-66 Score=445.04 Aligned_cols=422 Identities=25% Similarity=0.363 Sum_probs=362.4
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
.+.|+.++|.++|+++||++|+++.+ +.+||+||+++++++|.+|++.|+++||+|.+.+||..++++++||++++|+.
T Consensus 26 ~d~~l~d~L~~~A~~~pdriAv~d~~-~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~ 104 (542)
T COG1021 26 QDRTLTDILTDHAARYPDRIAVIDGE-RRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVA 104 (542)
T ss_pred cCCcHHHHHHHHHhhcCCceEEecCc-ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcc
Confidence 46799999999999999999999755 68999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCC-----chhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAE-----GNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKL 156 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (431)
+|.-=|.....+|.+......++.+|++.. ..+...+...+......++...+.+....+............+.+
T Consensus 105 PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~~a~~~~~a~ 184 (542)
T COG1021 105 PVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEAALCHPAGLFTPAP 184 (542)
T ss_pred hhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhhhhhCccccCCcCC
Confidence 999889888999999999999999999864 334444444443332222222222111111111111222334456
Q ss_pred CCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHH-HHHHHHhcCCEEEeCC
Q 014065 157 TNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLA-GLLSSFAAGAAVTLPA 235 (431)
Q Consensus 157 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~l~~G~~~~~~~ 235 (431)
+.++++++++..+.||||.||.+..+|+....+++.-.+.+++++++++++.+|..|.+.+.. +.++.+..|+++|+.+
T Consensus 185 ~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~ 264 (542)
T COG1021 185 PADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAP 264 (542)
T ss_pred CCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchhheeeeccEEEECC
Confidence 678899999999999999999999999999999999999999999999999999999887654 7889999999999988
Q ss_pred CCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCccc
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTE 315 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE 315 (431)
..++......|+++++|+..++|.....+++..+.. ..+++|||.+..||..+++.+.+++...+||++.+.+||.|
T Consensus 265 --~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~-~~~LsSLrllQVGGarl~~~~Arrv~~~lgC~LQQVFGMAE 341 (542)
T COG1021 265 --DPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWE-RADLSSLRLLQVGGARLSATLARRVPAVLGCQLQQVFGMAE 341 (542)
T ss_pred --CCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcc-cCCchheeEEeecCcccCHHHHhhchhhhCchHHHHhhhhh
Confidence 679999999999999999999999999999988764 56799999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCCCCCCccccc-c-ceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cCCceecC
Q 014065 316 ATHLMSSNPLPEDGPHKPGSVGRPV-G-QEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFHTG 392 (431)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TG 392 (431)
.-. .+...++..+....+-|+|+ + .+++|+|.+|++++.||+|+|..+||...+|||+.++.++..| .+|||+||
T Consensus 342 GLv--nyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsG 419 (542)
T COG1021 342 GLV--NYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSG 419 (542)
T ss_pred hhh--cccccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecC
Confidence 543 33333344455567899999 5 8999999999999999999999999999999999999999999 46999999
Q ss_pred ceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 393 DIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 393 D~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|++++|+||++.+.||.||+|+.+|++|-.+|||-..
T Consensus 420 D~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~L 456 (542)
T COG1021 420 DLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLL 456 (542)
T ss_pred ceeEecCCceEEEEeeehhhhccccchhhHHHHHHHH
Confidence 9999999999999999999999999999999999653
No 10
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=8.4e-65 Score=495.14 Aligned_cols=420 Identities=21% Similarity=0.312 Sum_probs=343.6
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.+.|.+.++++|++.|+.+.+.+++||+||.++++++|+.|.+. +||+|+++++|++++++++|||+++|+++
T Consensus 18 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~lA~~~~G~v~ 94 (539)
T PRK06334 18 GKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYFATLLSGKIP 94 (539)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHHHHHhcCCee
Confidence 468999999999999999999876556999999999999999999873 89999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHh-cCcccccccccccchhhhhhh----cc-ccccc----cc
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASK-LNISHATATLLDADSELTLSL----AH-SESDT----NA 152 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~----~~ 152 (431)
+|+++.++.+++.++++.+++++++++.+....+.+.... .......+...+......+.. .. ..... ..
T Consensus 95 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (539)
T PRK06334 95 VMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCRIGIYMSIPFEWLMRW 174 (539)
T ss_pred EecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhhhhhhhcCCchhhhhc
Confidence 9999999999999999999999999987655444333211 001111111111000000000 00 00000 00
Q ss_pred cccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEE
Q 014065 153 ISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVT 232 (431)
Q Consensus 153 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~ 232 (431)
.......++++++++|||||||.||+|.++|+++..+.......+++.++|++++.+|++|.+++...++.++..|++++
T Consensus 175 ~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv 254 (539)
T PRK06334 175 FGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVV 254 (539)
T ss_pred ccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEE
Confidence 01223467899999999999999999999999999888777778888999999999999999999877888999999998
Q ss_pred eCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceeccc
Q 014065 233 LPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAY 311 (431)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~y 311 (431)
+... .+++..+++.|+++++|++.++|++++.+++..... ...++++|.+++||+++++++.+++.+.+ ++.+++.|
T Consensus 255 ~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~Y 332 (539)
T PRK06334 255 FAYN-PLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQ-ESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGY 332 (539)
T ss_pred EecC-CCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhc-ccccccccEEEECCccCCHHHHHHHHHHCCCCeEEecc
Confidence 8653 578999999999999999999999999998765432 34578999999999999999999999988 68999999
Q ss_pred CcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECC-CCCcCCCCceeeEEEeCCccccccccCcchhhhcc--cCC
Q 014065 312 AMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDE-IGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF--LFG 387 (431)
Q Consensus 312 g~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~-~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~--~~g 387 (431)
|+||++.+++.... ......+++|+|+ +++++|+|+ .+.+++.|+.|||+++|++++.||+++++.+.... .+|
T Consensus 333 G~TE~~~~~~~~~~--~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~ 410 (539)
T PRK06334 333 GTTECSPVITINTV--NSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGET 410 (539)
T ss_pred cccccCceEEeccC--CCCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcccccceeeCCce
Confidence 99999877665432 2233456899999 899999995 48899999999999999999999999887644322 257
Q ss_pred ceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 388 WFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 388 ~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+|||+|++|++|++++.||.+|+||++|++|+|.|||.+.
T Consensus 411 w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l 452 (539)
T PRK06334 411 WYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESIL 452 (539)
T ss_pred eEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHH
Confidence 999999999999999999999999999999999999999864
No 11
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=8.1e-65 Score=504.86 Aligned_cols=418 Identities=22% Similarity=0.312 Sum_probs=329.7
Q ss_pred ccHHHHHHHHHHhcCCcceEEec----C----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVS----G----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAV 75 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~----~----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 75 (431)
.|+.++|++.++++|+++|+... + .+++||+||.++++++|++|.+.|+++||+|+|+++|+++|++++|||
T Consensus 43 ~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 122 (660)
T PLN02861 43 DSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (660)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 48899999999999999999642 1 147999999999999999999999999999999999999999999999
Q ss_pred HHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcC-cccccccccccchh------------hhhh
Q 014065 76 IRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLN-ISHATATLLDADSE------------LTLS 142 (431)
Q Consensus 76 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------------~~~~ 142 (431)
+++|++++|+++.++.+++.+++++++++++|++.+..+.+........ ....++.+.+.... ..+.
T Consensus 123 ~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 202 (660)
T PLN02861 123 NSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWE 202 (660)
T ss_pred HHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHH
Confidence 9999999999999999999999999999999998765544433332211 11111111110000 0011
Q ss_pred hccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhc-----CCCCCeEEEecChhhHHHH
Q 014065 143 LAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYK-----LTESDSTVIVLPLFHVHGM 217 (431)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~ 217 (431)
....... .........++++++++|||||||.||||++||.+++..+......++ +.++|++++.+|++|.+++
T Consensus 203 ~~~~~~~-~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~ 281 (660)
T PLN02861 203 EFSLMGS-LDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQ 281 (660)
T ss_pred HHHHhCc-ccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHH
Confidence 0000000 011122345789999999999999999999999999988776555443 4678999999999999998
Q ss_pred HHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccC-------------------------
Q 014065 218 LAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA------------------------- 272 (431)
Q Consensus 218 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~------------------------- 272 (431)
.. .+.+++.|+++++.+ +++..+++.|++++||+++++|++++.+.+....
T Consensus 282 ~~-~~~~l~~G~~v~~~~---~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~ 357 (660)
T PLN02861 282 VI-ETYCISKGASIGFWQ---GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLR 357 (660)
T ss_pred HH-HHHHHHhCCEEEEeC---CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHh
Confidence 76 556899999998864 4789999999999999999999999988642100
Q ss_pred --------CCCC----------CC-CCccEEEeccCCCcHHHHHHHHHHhC-CceecccCcccccCcccCCCCCCCCCCC
Q 014065 273 --------KPEP----------VY-PKLRFIRSCSASLAPVILSRLEEAFG-APVLEAYAMTEATHLMSSNPLPEDGPHK 332 (431)
Q Consensus 273 --------~~~~----------~~-~~l~~i~~~g~~~~~~~~~~~~~~~~-~~i~~~yg~tE~~~~~~~~~~~~~~~~~ 332 (431)
.... .+ +++|.+++||+++++++. .+.+.++ ..+++.||+||+++.++..... ....
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~--~~~~ 434 (660)
T PLN02861 358 KGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQGYGLTESCGGCFTSIAN--VFSM 434 (660)
T ss_pred cCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeEecchhhhhhceeecccc--cCCC
Confidence 0000 01 578999999999999975 4666666 4799999999998765543321 2234
Q ss_pred CCCccccc-cceEEEEC--CCC-CcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCeEEEecc
Q 014065 333 PGSVGRPV-GQEIAILD--EIG-VPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGR 408 (431)
Q Consensus 333 ~~~~G~~~-~~~~~i~d--~~~-~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR 408 (431)
.+++|+|+ +++++++| ++| ..++.++.|||+++||+++.||+++++.+++.|.+|||+|||+|++|+||+|+|.||
T Consensus 435 ~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~dG~l~i~GR 514 (660)
T PLN02861 435 VGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQPNGAMKIIDR 514 (660)
T ss_pred CCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECCCCcEEEEec
Confidence 68999999 89999998 334 344556789999999999999999999999999999999999999999999999999
Q ss_pred cccceec-CCeeccccceeccc
Q 014065 409 IKELINR-GGNLHESISLFLAK 429 (431)
Q Consensus 409 ~~d~i~~-~G~~i~~~~iE~a~ 429 (431)
+||+||. +|++|+|.|||.+.
T Consensus 515 ~kd~Ik~~~G~~I~p~eIE~~l 536 (660)
T PLN02861 515 KKNIFKLSQGEYVAVENLENTY 536 (660)
T ss_pred cccceEcCCCeEEcHHHHHHHH
Confidence 9999995 89999999999763
No 12
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-64 Score=499.57 Aligned_cols=422 Identities=20% Similarity=0.209 Sum_probs=332.7
Q ss_pred cHHHHHHHHHHh--cCCcceEEecC-----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHH
Q 014065 5 TLIGLLNQVIDQ--FSSKRALSVSG-----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIR 77 (431)
Q Consensus 5 tl~~~l~~~a~~--~p~~~a~~~~~-----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~ 77 (431)
+..++++++++. +|+++|+++.. .+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||++
T Consensus 60 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~ 139 (647)
T PTZ00237 60 TCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCAR 139 (647)
T ss_pred HHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 346677777754 79999998741 25899999999999999999999999999999999999999999999999
Q ss_pred hCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc---------hhHHHHHHHhcCcc-ccccccc-cc-----------
Q 014065 78 ARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG---------NAAAQAAASKLNIS-HATATLL-DA----------- 135 (431)
Q Consensus 78 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~-~~~~~~~-~~----------- 135 (431)
+|++++|+++.++.+++.+++++++++++|+++.. .+...+........ ..++... ..
T Consensus 140 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 219 (647)
T PTZ00237 140 IGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIE 219 (647)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccccccccccc
Confidence 99999999999999999999999999999997631 12222222211100 0111110 00
Q ss_pred -----chhhhhhhccc----cccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHH-HHHHHHHHHHHhcCCCCCeE
Q 014065 136 -----DSELTLSLAHS----ESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNN-LAASVSNIKSVYKLTESDST 205 (431)
Q Consensus 136 -----~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~-l~~~~~~~~~~~~~~~~~~~ 205 (431)
.....+..... .............++++++++|||||||.||+|+++|.+ +...............++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~ 299 (647)
T PTZ00237 220 TIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVV 299 (647)
T ss_pred ccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEE
Confidence 00000000000 000011112345678999999999999999999999998 44433333455567788999
Q ss_pred EEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCC----hhhHHHHHHHhcceeeecchHHHHHHHhcccC----CCCCC
Q 014065 206 VIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFS----ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA----KPEPV 277 (431)
Q Consensus 206 ~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~----~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----~~~~~ 277 (431)
++..|++|..+... ++.++..|+++++.+...+. +..+++.|+++++|+++.+|++++.+++.... ....+
T Consensus 300 ~~~~~~~w~~~~~~-~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~ 378 (647)
T PTZ00237 300 FSHSSIGWVSFHGF-LYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYD 378 (647)
T ss_pred EEcCCCceEeeHHH-HHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccC
Confidence 99999999876544 88899999999987643222 67899999999999999999999999875422 12345
Q ss_pred CCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCC
Q 014065 278 YPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEG 356 (431)
Q Consensus 278 ~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~ 356 (431)
++++|.++++|+++++++++++.+.+++++++.||+||+++.+..... ......+++|+|+ +++++|+|++|++++.
T Consensus 379 l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~--~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ 456 (647)
T PTZ00237 379 LSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYG--HINIPYNATGVPSIFIKPSILSEDGKELNV 456 (647)
T ss_pred cchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCC--CCCCCCCCCccCcCCceEEEECCCCCCCCC
Confidence 789999999999999999999999999999999999999866554322 1223347899999 8999999999999999
Q ss_pred CceeeEEEeCC---ccccccccCcchhhhccc--CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 357 GAKGEVCIRGP---NVTKGYKNNPEANKSAFL--FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 357 ~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~--~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+.|||++++| +++.||+++++.+.+.|. +|||+|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 457 ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l 534 (647)
T PTZ00237 457 NEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSI 534 (647)
T ss_pred CCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHH
Confidence 99999999986 789999999998887674 69999999999999999999999999999999999999999863
No 13
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-64 Score=492.87 Aligned_cols=414 Identities=27% Similarity=0.369 Sum_probs=345.6
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
.|+.++|++.|+.+|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~~-~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v 127 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDER-GTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARII 127 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEECC-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEE
Confidence 478999999999999999999754 6999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccccc-----chhhhhhhccccccccccccCCC
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA-----DSELTLSLAHSESDTNAISKLTN 158 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 158 (431)
|+++.++.+++.++++.++++++|++.+....+................... .....+....... .......
T Consensus 128 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 204 (549)
T PRK07788 128 LLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGS---STAPLPK 204 (549)
T ss_pred EeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCC---CCCCCCC
Confidence 9999999999999999999999999987665554432211110000000000 0000111100000 0111223
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGR 238 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~ 238 (431)
..++.++++|||||||.||+|.++|.++...+......+++.++++++...|++|.+++.. ++.++..|+++++.. .
T Consensus 205 ~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~l~~G~~~v~~~--~ 281 (549)
T PRK07788 205 PPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAH-LTLAMALGSTVVLRR--R 281 (549)
T ss_pred CCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHH-HHHHHHhCCEEEECC--C
Confidence 4567899999999999999999999999988888888888999999999999999999876 777899999999986 7
Q ss_pred CChhhHHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCccccc
Q 014065 239 FSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEAT 317 (431)
Q Consensus 239 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~ 317 (431)
+++..+++.++++++|++.++|+++..+++.... ....+++++|.+++||+++++++.+++.+.++..+++.||+||++
T Consensus 282 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~ 361 (549)
T PRK07788 282 FDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFGPVLYNLYGSTEVA 361 (549)
T ss_pred CCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcchhc
Confidence 8999999999999999999999999999887543 123457899999999999999999999999999999999999998
Q ss_pred CcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEE
Q 014065 318 HLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGY 396 (431)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~ 396 (431)
..+.... .+....++++|+|+ +++++++|+++++++.|+.|||+++|+.++.||++++.. ...+|||+|||+++
T Consensus 362 ~~~~~~~--~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~---~~~~g~~~TGDl~~ 436 (549)
T PRK07788 362 FATIATP--EDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVVGRIFVGNGFPFEGYTDGRDK---QIIDGLLSSGDVGY 436 (549)
T ss_pred hhhccCh--hhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCeEEEEEeCCCccccccCCCcc---cccCCceecCceEE
Confidence 6655433 22244567899999 899999999999999999999999999999999987764 34579999999999
Q ss_pred EcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 397 FDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 397 ~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 437 ~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l 469 (549)
T PRK07788 437 FDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLL 469 (549)
T ss_pred EcCCCCEEEeccCcceEEECCEEECHHHHHHHH
Confidence 999999999999999999999999999999863
No 14
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=4e-63 Score=491.61 Aligned_cols=420 Identities=30% Similarity=0.429 Sum_probs=340.4
Q ss_pred ccHHHHHHHHHHhcCCcceEEec-------CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHH
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVS-------GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVI 76 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~-------~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~ 76 (431)
.|+.++|.+.|+.+|+++|+++. +.+++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+
T Consensus 25 ~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~ 104 (632)
T PRK07529 25 ASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGE 104 (632)
T ss_pred CCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 47899999999999999999863 24799999999999999999999999999999999999999999999999
Q ss_pred HhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchh-----HHHHHHHhcCcccccccccccc---------------
Q 014065 77 RARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA-----AAQAAASKLNISHATATLLDAD--------------- 136 (431)
Q Consensus 77 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------------- 136 (431)
++| +++|+++.++.+++.++++.++++++|++..... ...............+.+....
T Consensus 105 ~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 183 (632)
T PRK07529 105 AAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRR 183 (632)
T ss_pred HhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccccccccccccccc
Confidence 999 5699999999999999999999999999865421 2222222111111111111000
Q ss_pred ----hhhhhhhcccccc-ccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecCh
Q 014065 137 ----SELTLSLAHSESD-TNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPL 211 (431)
Q Consensus 137 ----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~ 211 (431)
....+........ ..........++++++++|||||||.||+|.++|.+++.++......+++.+++++++.+|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~pl 263 (632)
T PRK07529 184 KAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVFCGLPL 263 (632)
T ss_pred ccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEEEecCc
Confidence 0000110000000 01111223467899999999999999999999999999888777777888999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCEEEeCCCCCCC----hhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEec
Q 014065 212 FHVHGMLAGLLSSFAAGAAVTLPAAGRFS----ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSC 287 (431)
Q Consensus 212 ~~~~~~~~~~~~~l~~G~~~~~~~~~~~~----~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~ 287 (431)
+|.+++...++.++..|++++++++..+. ...+++.++++++|++.++|+++..+++.... ..+++++|.+++|
T Consensus 264 ~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~--~~~~~slr~v~~g 341 (632)
T PRK07529 264 FHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD--GHDISSLRYALCG 341 (632)
T ss_pred hhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc--CCCccceEEEEEc
Confidence 99999988899999999999997643332 35788999999999999999999999876543 2357899999999
Q ss_pred cCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEE--CCCC---CcCCCCceee
Q 014065 288 SASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAIL--DEIG---VPQEGGAKGE 361 (431)
Q Consensus 288 g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~--d~~~---~~~~~~~~Ge 361 (431)
|+++++++.+++++.+++++++.||+||++.++..++. +.....+++|+|+ ++.++++ |++| ++++.|+.||
T Consensus 342 g~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~--~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Ge 419 (632)
T PRK07529 342 AAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPP--DGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGV 419 (632)
T ss_pred CCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCc--cccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceE
Confidence 99999999999999999999999999999877766542 2344678999999 6777774 6667 7899999999
Q ss_pred EEEeCCccccccccCcchhhhcc-cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 362 VCIRGPNVTKGYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 362 l~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+++||+++.||++++. +...+ .+|||+|||+|++|+||++++.||.||+||.+|.+|+|.|||.+.
T Consensus 420 l~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l 487 (632)
T PRK07529 420 LCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEAL 487 (632)
T ss_pred EEEECCCccccccCCcc-ccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHH
Confidence 99999999999998654 44444 679999999999999999999999999999999999999999864
No 15
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.7e-63 Score=495.95 Aligned_cols=421 Identities=22% Similarity=0.307 Sum_probs=339.6
Q ss_pred HHHHHHHHH-hcCCcceEEecC-----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 7 IGLLNQVID-QFSSKRALSVSG-----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 7 ~~~l~~~a~-~~p~~~a~~~~~-----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
.++|+++++ .+|+++|+++.+ .+++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 91 ~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Ga 170 (666)
T PLN02654 91 YNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGA 170 (666)
T ss_pred HHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 567777775 489999998742 26899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH---------HHHHHHhcC---ccc-ccccccccc-----h-----
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA---------AQAAASKLN---ISH-ATATLLDAD-----S----- 137 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~---------~~~~~~~~~---~~~-~~~~~~~~~-----~----- 137 (431)
+++|+++.++.+++.++++.++++++|+++..... +........ ... ..+...... .
T Consensus 171 v~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (666)
T PLN02654 171 VHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQE 250 (666)
T ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccccccccccccc
Confidence 99999999999999999999999999998763221 111111100 000 000000000 0
Q ss_pred --hhhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHH-HHHHHHHhcCCCCCeEEEecChhhH
Q 014065 138 --ELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAAS-VSNIKSVYKLTESDSTVIVLPLFHV 214 (431)
Q Consensus 138 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~-~~~~~~~~~~~~~~~~~~~~p~~~~ 214 (431)
...+..... .............+++++++|||||||.||+|+++|.+++.. .......++++++|++++..|++|.
T Consensus 251 ~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 329 (666)
T PLN02654 251 GRDVWWQDVVP-NYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWI 329 (666)
T ss_pred CCcccHHHHhh-cCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhh
Confidence 000000000 000011122246789999999999999999999999997643 4456667889999999999999999
Q ss_pred HHHHHHHHHHHhcCCEEEeCCCC--CCChhhHHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCC
Q 014065 215 HGMLAGLLSSFAAGAAVTLPAAG--RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASL 291 (431)
Q Consensus 215 ~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~ 291 (431)
++....++.+|..|+++++.++. .+++..+++.|+++++|+++.+|++++.+.+.... ....+++++|.++++|+++
T Consensus 330 ~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l 409 (666)
T PLN02654 330 TGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPI 409 (666)
T ss_pred hhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCC
Confidence 99888789999999999987642 24789999999999999999999999999876532 2234678999999999999
Q ss_pred cHHHHHHHHHHhC---CceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeC-
Q 014065 292 APVILSRLEEAFG---APVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRG- 366 (431)
Q Consensus 292 ~~~~~~~~~~~~~---~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~- 366 (431)
+++.++++.+.+| +++.+.||+||+++....... ......++++|+|+ |++++|+|++|++++.++.|||++++
T Consensus 410 ~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~-~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~~Gel~v~~~ 488 (666)
T PLN02654 410 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP-GAWPQKPGSATFPFFGVQPVIVDEKGKEIEGECSGYLCVKKS 488 (666)
T ss_pred CHHHHHHHHHHhCCCCCceeccccccccCCeeeccCC-CCCCCCCCccCCCCCCceEEEECCCCCCCCCCCceEEEEcCC
Confidence 9999999999997 789999999999876654432 12345678999999 89999999999999999999999999
Q ss_pred -CccccccccCcchhhhcc---cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 367 -PNVTKGYKNNPEANKSAF---LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 367 -~~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+++.||+++++.+...+ .+|||+|||+|++|+||+++++||.||+||++|++|+|.|||.+.
T Consensus 489 ~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l 555 (666)
T PLN02654 489 WPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESAL 555 (666)
T ss_pred CchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHH
Confidence 789999999998877665 279999999999999999999999999999999999999999864
No 16
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.6e-63 Score=497.61 Aligned_cols=422 Identities=27% Similarity=0.357 Sum_probs=330.5
Q ss_pred ccHHHHHHHHHHhcCCcceEEec-----------CC-----------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVS-----------GK-----------FDLTYSRIHELVERAASRLVAAGINAGDVVALT 61 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~-----------~~-----------~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~ 61 (431)
.|+.++|++.++.+||++|+.+. ++ +.+||+|+.++++++|++|.+.|+++||+|+|+
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 58999999999999999999431 22 238999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchh---
Q 014065 62 FPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSE--- 138 (431)
Q Consensus 62 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 138 (431)
++|+++|+++++||+++|++++|+++.++.+++.++++.++++++|++.+....+............++.+.+....
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~ 217 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVDSDS 217 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCchhhh
Confidence 99999999999999999999999999999999999999999999999877665555544333221222222211100
Q ss_pred ----------hhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh-cCCCCCeEEE
Q 014065 139 ----------LTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVY-KLTESDSTVI 207 (431)
Q Consensus 139 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~ 207 (431)
..+..................++++++++|||||||.||||++||++++.++....... ++.++|++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~d~~l~ 297 (696)
T PLN02387 218 SLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKNDVYLA 297 (696)
T ss_pred hhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCCCEEEE
Confidence 00010000000111112234679999999999999999999999999998887766553 5788999999
Q ss_pred ecChhhHHHHHHHHHHHHhcCCEEEeCCCCCC-C-----hhhHHHHHHHhcceeeecchHHHHHHHhcccCCC-------
Q 014065 208 VLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRF-S-----ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP------- 274 (431)
Q Consensus 208 ~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~-~-----~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~------- 274 (431)
++|++|.+++.. ....+..|+++.+...... + +..++..+++++||++.++|++++.+.+......
T Consensus 298 ~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~ 376 (696)
T PLN02387 298 YLPLAHILELAA-ESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLA 376 (696)
T ss_pred ECcHHHHHHHHH-HHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHH
Confidence 999999999876 4556777887766442111 1 2345678999999999999999999875421100
Q ss_pred -------------------------C--------------CCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCccc
Q 014065 275 -------------------------E--------------PVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTE 315 (431)
Q Consensus 275 -------------------------~--------------~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE 315 (431)
. ...+++|.+++||+++++++.+.+...+|+++++.||+||
T Consensus 377 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~~YG~TE 456 (696)
T PLN02387 377 KKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIGQGYGLTE 456 (696)
T ss_pred HHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCeeEeechhh
Confidence 0 0015899999999999999998888778999999999999
Q ss_pred ccCcccCCCCCCCCCCCCCCccccc-cceEEEEC-CCCC-cC--CCCceeeEEEeCCccccccccCcchhhhccc---CC
Q 014065 316 ATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILD-EIGV-PQ--EGGAKGEVCIRGPNVTKGYKNNPEANKSAFL---FG 387 (431)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~-~~--~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~---~g 387 (431)
+++.++.... .....+++|+|+ +++++|+| +++. .. ..++.|||+++||+++.||+++++.+++.|. +|
T Consensus 457 t~~~~~~~~~---~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G 533 (696)
T PLN02387 457 TCAGATFSEW---DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERG 533 (696)
T ss_pred cccceeecCc---ccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHhhhhccccCC
Confidence 9877665433 234568999999 89999998 5543 22 2345699999999999999999999999883 35
Q ss_pred --ceecCceEEEcCCCeEEEecccccceec-CCeeccccceeccc
Q 014065 388 --WFHTGDIGYFDSDGYLHLVGRIKELINR-GGNLHESISLFLAK 429 (431)
Q Consensus 388 --~~~TGD~~~~~~~g~l~~~gR~~d~i~~-~G~~i~~~~iE~a~ 429 (431)
||+|||+|++|+||++++.||+||+||. +|++|+|.|||.+.
T Consensus 534 ~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l 578 (696)
T PLN02387 534 MRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAAL 578 (696)
T ss_pred CceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHH
Confidence 9999999999999999999999999996 79999999999863
No 17
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=9.6e-63 Score=484.13 Aligned_cols=418 Identities=25% Similarity=0.303 Sum_probs=339.0
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.++|++.++++|+++|++.. ++++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 6 ~~~~~~~~~~~~~~~p~~~a~~~~-~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav~ 84 (563)
T PLN02860 6 QAHICQCLTRLATLRGNAVVTISG-NRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGIV 84 (563)
T ss_pred hhHHHHHHHHHHHhcCCceEEecC-CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEEE
Confidence 357999999999999999999864 4799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHH-hcCcccccccccccchh--hhhhhccccc----c--cccc
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAAS-KLNISHATATLLDADSE--LTLSLAHSES----D--TNAI 153 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~----~--~~~~ 153 (431)
+|+++.++.+++.++++.+++++++++............ ........+...+.... ..+....... . ....
T Consensus 85 vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (563)
T PLN02860 85 APLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALGTTE 164 (563)
T ss_pred EeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCcccccc
Confidence 999999999999999999999999998765333322211 11100001111110000 0000000000 0 0011
Q ss_pred ccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEe
Q 014065 154 SKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTL 233 (431)
Q Consensus 154 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 233 (431)
......++++++++|||||||.||+|.++|.++..+.......+++.++|+++..+|++|.+++.. ++.++..|+++++
T Consensus 165 ~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~v~ 243 (563)
T PLN02860 165 LDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS-ALAMLMVGACHVL 243 (563)
T ss_pred ccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHH-HHHHHHcCceEEe
Confidence 112335789999999999999999999999999887777677788999999999999999999876 8889999999999
Q ss_pred CCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCC-CCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceeccc
Q 014065 234 PAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAY 311 (431)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~y 311 (431)
.+ .+++..+++.++++++|++.++|+++..+++..... ....++++|.+++||+++++++.+.+.+.| ++++++.|
T Consensus 244 ~~--~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~Y 321 (563)
T PLN02860 244 LP--KFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAY 321 (563)
T ss_pred cC--CCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCC
Confidence 87 789999999999999999999999999998765322 123468999999999999999999999988 78999999
Q ss_pred CcccccCcccCCCCCCC--------------------CCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccc
Q 014065 312 AMTEATHLMSSNPLPED--------------------GPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVT 370 (431)
Q Consensus 312 g~tE~~~~~~~~~~~~~--------------------~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~ 370 (431)
|+||+++.+........ ......++|+|+ ++++++++++ .|+.|||+++|+.++
T Consensus 322 G~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~-----~g~~Gel~v~g~~~~ 396 (563)
T PLN02860 322 GMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE-----SSRVGRILTRGPHVM 396 (563)
T ss_pred CccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC-----CCceeEEEEecCccc
Confidence 99999865543322110 011223789999 8999999865 578899999999999
Q ss_pred cccccCcchhhhcc-cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 371 KGYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 371 ~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.||+++++.++..+ .+|||+|||+|++|+||++++.||.+|+||++|++|+|.|||.+.
T Consensus 397 ~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l 456 (563)
T PLN02860 397 LGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVL 456 (563)
T ss_pred ccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHH
Confidence 99999999888877 479999999999999999999999999999999999999999863
No 18
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1e-62 Score=489.07 Aligned_cols=423 Identities=21% Similarity=0.275 Sum_probs=337.0
Q ss_pred HHHHHHHHHhcCCcceEEec-----CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 7 IGLLNQVIDQFSSKRALSVS-----GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 7 ~~~l~~~a~~~p~~~a~~~~-----~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
.++++++++.+|+++|+++. +++++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++|++
T Consensus 55 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav 134 (628)
T TIGR02316 55 HNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAI 134 (628)
T ss_pred HHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCE
Confidence 56788888889999999873 2368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCch---------hHHHHHHHhcC-cccccccccccc--------hhhhhhh
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN---------AAAQAAASKLN-ISHATATLLDAD--------SELTLSL 143 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~ 143 (431)
++|+++.++.+++.++++.++++++|+++... ....+...... ....++.+.... ....+..
T Consensus 135 ~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 214 (628)
T TIGR02316 135 HSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRLIPGRDVDYAA 214 (628)
T ss_pred EEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCccccHHH
Confidence 99999999999999999999999999986421 11222211111 111111111100 0001110
Q ss_pred ccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHH-HHHHHHHhcCCCCCeEEEecChhhHHHHHHHHH
Q 014065 144 AHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAAS-VSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLL 222 (431)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 222 (431)
..........+.....++++++++|||||||.||+|.++|.+++.+ .......++++++|++++..|++|..++...++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~ 294 (628)
T TIGR02316 215 LRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVY 294 (628)
T ss_pred HhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHH
Confidence 0000000111112245789999999999999999999999997644 445566678899999999999999999877789
Q ss_pred HHHhcCCEEEeCCCC--CCChhhHHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCCcHHHHHHH
Q 014065 223 SSFAAGAAVTLPAAG--RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVILSRL 299 (431)
Q Consensus 223 ~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~~~~~ 299 (431)
.+|..|+++++.++. .+++..+++.|+++++|+++.+|++++.+.+.... ....+++++|.+++||+++++++.+++
T Consensus 295 ~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~ 374 (628)
T TIGR02316 295 APLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWI 374 (628)
T ss_pred HHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHH
Confidence 999999999987632 34788999999999999999999999998775432 123458999999999999999999999
Q ss_pred HHHhCCceecccCcccccCcccCCCCC-CCCCCCCCCccccc-cceEEEECC-CCCcCCCCceeeEEEeCC---cccccc
Q 014065 300 EEAFGAPVLEAYAMTEATHLMSSNPLP-EDGPHKPGSVGRPV-GQEIAILDE-IGVPQEGGAKGEVCIRGP---NVTKGY 373 (431)
Q Consensus 300 ~~~~~~~i~~~yg~tE~~~~~~~~~~~-~~~~~~~~~~G~~~-~~~~~i~d~-~~~~~~~~~~Gel~v~~~---~~~~gy 373 (431)
.+.++..+++.||+||++..++..... .......+++|+|+ |++++|+|+ +|++++.|+.|||+++|| +.+.||
T Consensus 375 ~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~ 454 (628)
T TIGR02316 375 TDGLGKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTV 454 (628)
T ss_pred HHHhCCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEEecCCCccccccc
Confidence 999999999999999998544333221 11234567899999 899999997 699999999999999998 567899
Q ss_pred ccCcchhhhcc----cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 374 KNNPEANKSAF----LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 374 ~~~~~~~~~~~----~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+++++.+.+.+ .++||+|||+|++|+||+++++||.||+||++|.+|+|.|||.+.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l 514 (628)
T TIGR02316 455 WGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESV 514 (628)
T ss_pred cCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHH
Confidence 99887766543 467999999999999999999999999999999999999999864
No 19
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=4.6e-62 Score=478.23 Aligned_cols=421 Identities=26% Similarity=0.396 Sum_probs=350.5
Q ss_pred cccHHHHHHHHHHhcCCcceEEecC-----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHH
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSG-----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIR 77 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~-----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~ 77 (431)
+.|+.+.|++.++.+|+++|+++.+ .+++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||++
T Consensus 23 ~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~ 102 (547)
T PRK13295 23 DRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSR 102 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 4589999999999999999998754 26999999999999999999999999999999999999999999999999
Q ss_pred hCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch-----hHHHHHHHhcCcccccccccccchhhhhhhc---c---c
Q 014065 78 ARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN-----AAAQAAASKLNISHATATLLDADSELTLSLA---H---S 146 (431)
Q Consensus 78 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~ 146 (431)
+|++++|++|.++.+++.++++.+++++++++++.. +...............+.... .....+... . .
T Consensus 103 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 181 (547)
T PRK13295 103 IGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGG-DGADSFEALLITPAWEQ 181 (547)
T ss_pred cCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecC-CCccCHHHHhhCCcccc
Confidence 999999999999999999999999999999987642 112222222111111111111 100001000 0 0
Q ss_pred -cccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHH
Q 014065 147 -ESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSF 225 (431)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 225 (431)
..............+++++++|||||||.||+|.++|.+++..+......+++.+++++++.+|++|..++...++.++
T Consensus 182 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l 261 (547)
T PRK13295 182 EPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAHQTGFMYGLMMPV 261 (547)
T ss_pred ccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHHH
Confidence 0000111122345689999999999999999999999999988888888889999999999999999999888899999
Q ss_pred hcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCC
Q 014065 226 AAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGA 305 (431)
Q Consensus 226 ~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~ 305 (431)
..|+++++.+ .+++..+++.++++++|.+..+|+++..+....... ...++++|.+++||+++++++.+.+.+.+++
T Consensus 262 ~~G~~~~~~~--~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~-~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~ 338 (547)
T PRK13295 262 MLGATAVLQD--IWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKES-GRPVSSLRTFLCAGAPIPGALVERARAALGA 338 (547)
T ss_pred HcCCeEEeCC--CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccc-CCCcccceEEEEecCCCCHHHHHHHHHHhCC
Confidence 9999999977 679999999999999999999999999998765433 3457899999999999999999999999999
Q ss_pred ceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcc
Q 014065 306 PVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF 384 (431)
Q Consensus 306 ~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 384 (431)
++++.||+||++.+.+.+.. ........++|+|+ +++++|+|+++++++.|+.|||+++|+.++.||+++++.++..
T Consensus 339 ~~~~~YG~TE~~~~~~~~~~-~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~- 416 (547)
T PRK13295 339 KIVSAWGMTENGAVTLTKLD-DPDERASTTDGCPLPGVEVRVVDADGAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGTD- 416 (547)
T ss_pred CeEEeccCCCCCCeeeccCC-CcchhccCccccccCCcEEEEECCCCCCCCCCCCCeEEEEcCcccccccCCccccccC-
Confidence 99999999999876554432 11223456889999 8999999999999999999999999999999999998887665
Q ss_pred cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 385 LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 385 ~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.+|||+|||+|+++++|++++.||.+|+||++|++|+|.+||.+.
T Consensus 417 ~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l 461 (547)
T PRK13295 417 ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALL 461 (547)
T ss_pred CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHH
Confidence 679999999999999999999999999999999999999999863
No 20
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.4e-62 Score=488.98 Aligned_cols=422 Identities=23% Similarity=0.320 Sum_probs=340.4
Q ss_pred HHHHHHHHHHhcCCcceEEecC-----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 6 LIGLLNQVIDQFSSKRALSVSG-----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 6 l~~~l~~~a~~~p~~~a~~~~~-----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
..++|+++++.+|+++|+++.+ .+++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++|+
T Consensus 59 ~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 138 (625)
T TIGR02188 59 SYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGA 138 (625)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCC
Confidence 4567778888899999998743 25899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCch---------hHHHHHHHhcC-cccccccccccch--------hhhhh
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN---------AAAQAAASKLN-ISHATATLLDADS--------ELTLS 142 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~ 142 (431)
+++|+++.++.+++.++++.++++++|+++... ....+...... .....+....... ...+.
T Consensus 139 v~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (625)
T TIGR02188 139 IHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPWVEGRDVWWH 218 (625)
T ss_pred EEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCccccccccHH
Confidence 999999999999999999999999999987532 22222222211 0011111100000 00001
Q ss_pred hccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHH-HHHHHhcCCCCCeEEEecChhhHHHHHHHH
Q 014065 143 LAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVS-NIKSVYKLTESDSTVIVLPLFHVHGMLAGL 221 (431)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 221 (431)
.... ............++++++++|||||||.||+|+++|.+++.+.. .....+++.++|++++..|++|..+....+
T Consensus 219 ~~~~-~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~ 297 (625)
T TIGR02188 219 DLMA-KASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIV 297 (625)
T ss_pred HHHh-hcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHH
Confidence 0000 00111122345678999999999999999999999999765543 344556888999999999999999887778
Q ss_pred HHHHhcCCEEEeCCCC--CCChhhHHHHHHHhcceeeecchHHHHHHHhcccCC-CCCCCCCccEEEeccCCCcHHHHHH
Q 014065 222 LSSFAAGAAVTLPAAG--RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSR 298 (431)
Q Consensus 222 ~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~~l~~i~~~g~~~~~~~~~~ 298 (431)
+.+|..|+++++.+.. .+++..+++.|+++++|++.++|++++.+.+..... ...+++++|.++++|++++++++++
T Consensus 298 ~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~ 377 (625)
T TIGR02188 298 YGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMW 377 (625)
T ss_pred HHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHH
Confidence 9999999999986532 347899999999999999999999999998765432 2345789999999999999999999
Q ss_pred HHHHhC---CceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCC-CCceeeEEEeC--Ccccc
Q 014065 299 LEEAFG---APVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQE-GGAKGEVCIRG--PNVTK 371 (431)
Q Consensus 299 ~~~~~~---~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~-~~~~Gel~v~~--~~~~~ 371 (431)
+.+.++ +++++.||+||+++.++..... .....++++|+|+ |++++|+|++|++++ .|+.|||++++ |+++.
T Consensus 378 ~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~-~~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~~GeL~v~~p~p~~~~ 456 (625)
T TIGR02188 378 YYKVVGKERCPIVDTWWQTETGGIMITPLPG-ATPTKPGSATLPFFGIEPAVVDEEGNPVEGPGEGGYLVIKQPWPGMLR 456 (625)
T ss_pred HHHHcCCCCCceEecccccccCCceeecCCC-CCCcCCCcccCCcCCceEEEECCCCCCCCCCCCeEEEEEccCCCcccc
Confidence 999885 7899999999998776544321 2245678899999 899999999999999 89999999999 68999
Q ss_pred ccccCcchhhhcc---cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 372 GYKNNPEANKSAF---LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 372 gy~~~~~~~~~~~---~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+++++.+...+ .+|||+|||+|++|+||++++.||+||+||++|++|+|.|||.+.
T Consensus 457 gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l 517 (625)
T TIGR02188 457 TIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESAL 517 (625)
T ss_pred cccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHH
Confidence 9999998776665 368999999999999999999999999999999999999999864
No 21
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-62 Score=477.03 Aligned_cols=414 Identities=23% Similarity=0.316 Sum_probs=342.8
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
.++.+.|.+.++++|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 121 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLIDEL-GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADIL 121 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEeCC-CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEE
Confidence 578999999999999999999754 6999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCe
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDV 163 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (431)
|+++.++.+++.++++.++++++|++.+....+...............+.+......+........ . ......+++.
T Consensus 122 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~ 198 (537)
T PRK13382 122 LLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAAHA-G--QRPEPTGRKG 198 (537)
T ss_pred ecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhccC-c--CCCCCCCCCC
Confidence 999999999999999999999999998765544433221111111111111000001110000000 0 0112246788
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhh
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAST 243 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 243 (431)
++++|||||||.||+|.++|.++..........+.+..+++++..+|++|.+++.. ++.++..|+++++.. .+++..
T Consensus 199 ~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~g~~~~~~~--~~~~~~ 275 (537)
T PRK13382 199 RVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQ-LVLAASLACTIVTRR--RFDPEA 275 (537)
T ss_pred eEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHH-HHHHHhcCcEEEECC--CcCHHH
Confidence 99999999999999999999988888777777888889999999999999999855 888899999999876 789999
Q ss_pred HHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccC
Q 014065 244 FWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSS 322 (431)
Q Consensus 244 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~ 322 (431)
+++.|+++++|++.++|++++.+++.... ....+++++|.+++||+++++++++.+.+.++..+++.||+||++.++..
T Consensus 276 ~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~ 355 (537)
T PRK13382 276 TLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYNATEAGMIATA 355 (537)
T ss_pred HHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcCCcEEecccccccCcceec
Confidence 99999999999999999999999876432 11234578999999999999999999999999999999999999977665
Q ss_pred CCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCC
Q 014065 323 NPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDG 401 (431)
Q Consensus 323 ~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g 401 (431)
++. .....++++|+|+ ++.++++|+++++++.|+.|||+++|++++.||+ ++.+. .+.+|||+|||+++++++|
T Consensus 356 ~~~--~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~GEl~v~g~~~~~gY~--~~~~~-~~~~g~~~TGDl~~~~~~g 430 (537)
T PRK13382 356 TPA--DLRAAPDTAGRPAEGTEIRILDQDFREVPTGEVGTIFVRNDTQFDGYT--SGSTK-DFHDGFMASGDVGYLDENG 430 (537)
T ss_pred Chh--HhccCCCCccccCcCcEEEEECCCCCCCCCCCeeEEEEEcCCcccCcc--ccchh-hccCCCEeeCceEEEeCCC
Confidence 432 2234567999999 8999999999999999999999999999999998 33333 3568999999999999999
Q ss_pred eEEEecccccceecCCeeccccceeccc
Q 014065 402 YLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 402 ~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
++++.||.+|+||.+|++|+|.|||.+.
T Consensus 431 ~l~~~GR~dd~ik~~G~~v~~~eIE~~l 458 (537)
T PRK13382 431 RLFVVGRDDEMIVSGGENVYPIEVEKTL 458 (537)
T ss_pred cEEEeccccceeEECCEEECHHHHHHHH
Confidence 9999999999999999999999999863
No 22
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-62 Score=492.40 Aligned_cols=417 Identities=23% Similarity=0.340 Sum_probs=328.1
Q ss_pred cccHHHHHHHHHHhcCCcceEEec--------------------------CCCcccHHHHHHHHHHHHHHHHHcCCCCCC
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVS--------------------------GKFDLTYSRIHELVERAASRLVAAGINAGD 56 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~--------------------------~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd 56 (431)
..|+.++|.++++++|+++|+.+. +++++||+||.++++++|++|+++|+++||
T Consensus 68 ~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd 147 (700)
T PTZ00216 68 GPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGS 147 (700)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 358999999999999999999873 246899999999999999999999999999
Q ss_pred EEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcc-ccccccccc
Q 014065 57 VVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNIS-HATATLLDA 135 (431)
Q Consensus 57 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 135 (431)
+|+|+++|+++|+++++||+++|++++|+++.++.+++.++++++++++++++......+.......... ...+.+...
T Consensus 148 ~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~~ 227 (700)
T PTZ00216 148 NVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDSL 227 (700)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999876544433332221111 111111111
Q ss_pred chh--------hhhhhcccc---ccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh-----cC
Q 014065 136 DSE--------LTLSLAHSE---SDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVY-----KL 199 (431)
Q Consensus 136 ~~~--------~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-----~~ 199 (431)
... ..+...... ............++++++++|||||||.||||++||+++++++......+ .+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~ 307 (700)
T PTZ00216 228 PASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPP 307 (700)
T ss_pred ccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCC
Confidence 000 001100000 00111112334678999999999999999999999999998877655433 24
Q ss_pred CCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHH-------HHHHhcceeeecchHHHHHHHhcccC
Q 014065 200 TESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQ-------DMIKYNATWYTAVPTIHQIVLDRHVA 272 (431)
Q Consensus 200 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~-------~i~~~~~t~~~~~p~~~~~l~~~~~~ 272 (431)
.+++++++.+|++|.+++.. ....+..|+++++. ++..+.+ .+++++||++..+|++++.+.+....
T Consensus 308 ~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~-----~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~ 381 (700)
T PTZ00216 308 EEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG-----SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEA 381 (700)
T ss_pred CCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC-----CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHH
Confidence 67899999999999998766 55567888887763 2444443 68899999999999999987653210
Q ss_pred C-------------------------C-C--------------CCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccC
Q 014065 273 K-------------------------P-E--------------PVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYA 312 (431)
Q Consensus 273 ~-------------------------~-~--------------~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg 312 (431)
. . . ...+++|.+++||+++++++.++++..++ ++++.||
T Consensus 382 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~-~l~~~YG 460 (700)
T PTZ00216 382 KLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG-MVIQGWG 460 (700)
T ss_pred HHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-hHhhccC
Confidence 0 0 0 00157999999999999999988887778 9999999
Q ss_pred cccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCC--CcCCCCceeeEEEeCCccccccccCcchhhhcc-cCCc
Q 014065 313 MTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIG--VPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGW 388 (431)
Q Consensus 313 ~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~--~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~ 388 (431)
+||+++..+.... .....+++|+|+ +++++|+|+++ ...+.++.|||+++||+++.||+++++.+++.| .+||
T Consensus 461 ~TEt~~~~~~~~~---~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw 537 (700)
T PTZ00216 461 LTETVCCGGIQRT---GDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGW 537 (700)
T ss_pred cccccccccccCC---CCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCC
Confidence 9999876655432 234568999999 89999999764 234556679999999999999999999999998 4799
Q ss_pred eecCceEEEcCCCeEEEeccccccee-cCCeeccccceeccc
Q 014065 389 FHTGDIGYFDSDGYLHLVGRIKELIN-RGGNLHESISLFLAK 429 (431)
Q Consensus 389 ~~TGD~~~~~~~g~l~~~gR~~d~i~-~~G~~i~~~~iE~a~ 429 (431)
|+|||+|++|+||+++|.||.||+|| .+|++|+|.|||.+.
T Consensus 538 ~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l 579 (700)
T PTZ00216 538 FHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALY 579 (700)
T ss_pred eeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHH
Confidence 99999999999999999999999998 899999999999763
No 23
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-62 Score=477.11 Aligned_cols=425 Identities=38% Similarity=0.596 Sum_probs=347.0
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCC-CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGK-FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~-~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
..|+.++|++.++++|+++|+++.++ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 15 ~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 94 (534)
T PRK05852 15 GPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLV 94 (534)
T ss_pred cccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcE
Confidence 35799999999999999999987553 58999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc----hhhhhhhccccccccccccCC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD----SELTLSLAHSESDTNAISKLT 157 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 157 (431)
++|++|.++.+++.++++.++++.+|++............. .... ...+.... .....................
T Consensus 95 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (534)
T PRK05852 95 VVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTR-WWPL-TVNVGGDSGPSGGTLSVHLDAATEPTPATSTPE 172 (534)
T ss_pred EeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhcccccc-ccce-eeeecccccccccccccccccccCCCccccccC
Confidence 99999999999999999999999999987533211110000 0000 00000000 000000000000000011112
Q ss_pred CCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC
Q 014065 158 NDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG 237 (431)
Q Consensus 158 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~ 237 (431)
...++.++++|||||||.||+|.++|.++...+......+++..+|++++.+|++|.+++...++.++..|+++++++..
T Consensus 173 ~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~ 252 (534)
T PRK05852 173 GLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARG 252 (534)
T ss_pred CCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCc
Confidence 23467899999999999999999999999998888888889999999999999999999998899999999999987755
Q ss_pred CCChhhHHHHHHHhcceeeecchHHHHHHHhcccCC-CCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccc
Q 014065 238 RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEA 316 (431)
Q Consensus 238 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~ 316 (431)
.+++..+++.++++++|.++++|++++.+.+..... ...+.+++|.++++|+++++++.+.+.+.++.++++.||+||+
T Consensus 253 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG~tE~ 332 (534)
T PRK05852 253 RFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTEA 332 (534)
T ss_pred CcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHhCCChhhccCcccc
Confidence 678999999999999999999999999998865432 1234689999999999999999999999999999999999999
Q ss_pred cCcccCCCCC-----CCCCCCCCCccccccceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceec
Q 014065 317 THLMSSNPLP-----EDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHT 391 (431)
Q Consensus 317 ~~~~~~~~~~-----~~~~~~~~~~G~~~~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~T 391 (431)
+..++..... .+.....+..|++.+++++++|++|++++.|+.|||+++|+.+++||+++++.+.+.|.+|||+|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~T 412 (534)
T PRK05852 333 THQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVGSDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRT 412 (534)
T ss_pred chhhhcCCccccccccCcccccccCCCCCCCeEEEECCCCCCCCCCCceEEEEecCcccchhcCCcccchhhhcCCCccc
Confidence 8766543321 01112334455544899999999999999999999999999999999999999998899999999
Q ss_pred CceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 392 GDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 392 GD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||++++|+||++++.||.+|+||.+|.+|+|.+||.+.
T Consensus 413 GD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l 450 (534)
T PRK05852 413 GDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVL 450 (534)
T ss_pred CceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHH
Confidence 99999999999999999999999999999999999863
No 24
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-61 Score=472.34 Aligned_cols=424 Identities=32% Similarity=0.451 Sum_probs=359.5
Q ss_pred CCcccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 1 MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 1 m~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
|+..++.+.|++.++.+|+++|+.+.+ +++||+||++++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 2 ~~~~~i~~~l~~~~~~~~~~~a~~~~~-~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~ 80 (513)
T PRK07656 2 NEWMTLPELLARAARRFGDKEAYVFGD-QRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGA 80 (513)
T ss_pred CccccHHHHHHHHHHHCCCCeEEEeCC-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCe
Confidence 566889999999999999999999755 7999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchh------hhhhhccccccccccc
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSE------LTLSLAHSESDTNAIS 154 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 154 (431)
+++|+++..+.+++..+++.++++++++++...................+........ ..+..... .......
T Consensus 81 ~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (513)
T PRK07656 81 VVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLA-AGDPAER 159 (513)
T ss_pred EEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHh-cCCCCCC
Confidence 9999999999999999999999999999987665554433222211111111111000 00110000 0001112
Q ss_pred cCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC
Q 014065 155 KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234 (431)
Q Consensus 155 ~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 234 (431)
.....++++++++|||||||.||+|.++|.++...+......+++.+++++++.+|++|.+++...++.++..|+++++.
T Consensus 160 ~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 239 (513)
T PRK07656 160 APEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL 239 (513)
T ss_pred cCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec
Confidence 33456789999999999999999999999999988888888889999999999999999999988899999999999987
Q ss_pred CCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCC-ceecccCc
Q 014065 235 AAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGA-PVLEAYAM 313 (431)
Q Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~-~i~~~yg~ 313 (431)
+ .+++..+++.++++++|++.++|+++..+.+..... ...++++|.+++||+++++++.+.+.+.++. .+++.||+
T Consensus 240 ~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~ 316 (513)
T PRK07656 240 P--VFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRS-AEDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGL 316 (513)
T ss_pred C--cCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcC-CCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEcc
Confidence 6 678999999999999999999999999998876543 3357899999999999999999999999988 89999999
Q ss_pred ccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc-CCceec
Q 014065 314 TEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL-FGWFHT 391 (431)
Q Consensus 314 tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~T 391 (431)
||++++...+.........++++|+|+ +.+++|+|+++++++.|+.|||+++++.++.||++++..+...+. +|||+|
T Consensus 317 tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~t 396 (513)
T PRK07656 317 SEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHT 396 (513)
T ss_pred ccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceec
Confidence 999887776654222223367899999 899999999999999999999999999999999999888877776 799999
Q ss_pred CceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 392 GDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 392 GD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+|+++++|.+++.||.+|+||++|.+++|.+||.+.
T Consensus 397 GDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l 434 (513)
T PRK07656 397 GDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVL 434 (513)
T ss_pred cceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHH
Confidence 99999999999999999999999999999999999863
No 25
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=8e-62 Score=484.16 Aligned_cols=421 Identities=24% Similarity=0.340 Sum_probs=338.8
Q ss_pred HHHHHHHHHhcCCcceEEecC-----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 7 IGLLNQVIDQFSSKRALSVSG-----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 7 ~~~l~~~a~~~p~~~a~~~~~-----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
.++|+++++++|+++|+++.+ .+++||+||+++++++|++|++.|+++||+|+++++|+++++++++||+++|++
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 149 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAV 149 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 467888888999999999743 247999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCch---------hHHHHHHHhcCcccccccccccc--------hhhhhhhc
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN---------AAAQAAASKLNISHATATLLDAD--------SELTLSLA 144 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 144 (431)
++|++|.++.+++.++++.++++++|+++... +.+.+...........+...... ....+...
T Consensus 150 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (637)
T PRK00174 150 HSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDWVEGRDLWWHEL 229 (637)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCcCCCCcccHHHH
Confidence 99999999999999999999999999987532 12222222111111111111000 00001100
Q ss_pred cccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHH-HHHHHhcCCCCCeEEEecChhhHHHHHHHHHH
Q 014065 145 HSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVS-NIKSVYKLTESDSTVIVLPLFHVHGMLAGLLS 223 (431)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 223 (431)
.. ............++++++++|||||||.||+|.++|.+++.+.. .....+++.++|++++..|++|..++...++.
T Consensus 230 ~~-~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 308 (637)
T PRK00174 230 VA-GASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYG 308 (637)
T ss_pred Hh-hcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHH
Confidence 00 00111112234578999999999999999999999999875544 34445688889999999999999998777899
Q ss_pred HHhcCCEEEeCCCC--CCChhhHHHHHHHhcceeeecchHHHHHHHhcccCC-CCCCCCCccEEEeccCCCcHHHHHHHH
Q 014065 224 SFAAGAAVTLPAAG--RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSRLE 300 (431)
Q Consensus 224 ~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~~l~~i~~~g~~~~~~~~~~~~ 300 (431)
+|..|+++++.+.. .+++..+++.|+++++|++..+|++++.+++..... ...+++++|.++++|+++++++++++.
T Consensus 309 ~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~ 388 (637)
T PRK00174 309 PLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYY 388 (637)
T ss_pred HHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHH
Confidence 99999999986532 347899999999999999999999999998765332 234578999999999999999999999
Q ss_pred HHhC---CceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeC--Cccccccc
Q 014065 301 EAFG---APVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRG--PNVTKGYK 374 (431)
Q Consensus 301 ~~~~---~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~--~~~~~gy~ 374 (431)
+.++ +++++.||+||++..+..... ......++++|+|+ |++++|+|++|++++.|+.|||+++| |+++.||+
T Consensus 389 ~~~~~~~~~i~~~YG~TE~~~~~~~~~~-~~~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~~Gel~v~g~~p~~~~gy~ 467 (637)
T PRK00174 389 KVVGGERCPIVDTWWQTETGGIMITPLP-GATPLKPGSATRPLPGIQPAVVDEEGNPLEGGEGGNLVIKDPWPGMMRTIY 467 (637)
T ss_pred HHhCCCCCceEecccccccCCceEecCC-CCCCcCCCcccCCCCCceEEEECCCCCCCCCCCcEEEEEcCCCCccccccc
Confidence 8885 789999999999876654322 11234567899999 89999999999999999999999999 68999999
Q ss_pred cCcchhhhcc---cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 375 NNPEANKSAF---LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 375 ~~~~~~~~~~---~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
++++.+.+.+ .+|||+|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 468 ~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 525 (637)
T PRK00174 468 GDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESAL 525 (637)
T ss_pred CCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHH
Confidence 9998777665 368999999999999999999999999999999999999999863
No 26
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=8.2e-62 Score=477.44 Aligned_cols=419 Identities=23% Similarity=0.341 Sum_probs=332.7
Q ss_pred CCcccHHHHHHHHHHhcCCcceEEecCC---------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHH
Q 014065 1 MEGVTLIGLLNQVIDQFSSKRALSVSGK---------FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIM 71 (431)
Q Consensus 1 m~~~tl~~~l~~~a~~~p~~~a~~~~~~---------~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~ 71 (431)
|...|+.+.|.+.++++|+++|+++.++ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++
T Consensus 3 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~ 82 (552)
T PRK09274 3 ASMANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFAL 82 (552)
T ss_pred hhhhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHH
Confidence 4567899999999999999999987543 2899999999999999999999999999999999999999999
Q ss_pred HHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhc-Cccccccccccc--chhhhhhhccccc
Q 014065 72 FLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKL-NISHATATLLDA--DSELTLSLAHSES 148 (431)
Q Consensus 72 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~ 148 (431)
++||+++|++++|++|.++.+++.++++.++++++|+++... ......... ......+..... .....+.......
T Consensus 83 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 161 (552)
T PRK09274 83 TFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAH-LARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRDG 161 (552)
T ss_pred HHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHH-HHHHHhccCccchhheeccccccccCCccHHHhcccC
Confidence 999999999999999999999999999999999999875311 111111000 000001101000 0000111110000
Q ss_pred cccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcC
Q 014065 149 DTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAG 228 (431)
Q Consensus 149 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G 228 (431)
...........++++++++|||||||.||+|.++|.++...+......+++.++++.+..+|++|.+++ ..|
T Consensus 162 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~--------~~g 233 (552)
T PRK09274 162 AAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALFGP--------ALG 233 (552)
T ss_pred ccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhhhh--------hhC
Confidence 111112233456899999999999999999999999999988888888899999999999998876443 347
Q ss_pred CEEEeCCC-----CCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh
Q 014065 229 AAVTLPAA-----GRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF 303 (431)
Q Consensus 229 ~~~~~~~~-----~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~ 303 (431)
.++++++. ..+++..+++.|+++++|+++++|++++.+.+..... ..+++++|.+++||+++++++.+++.+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-~~~~~~lr~~~~gG~~~~~~~~~~~~~~~ 312 (552)
T PRK09274 234 MTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEAN-GIKLPSLRRVISAGAPVPIAVIERFRAML 312 (552)
T ss_pred CeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhc-CCCCchhhEEEecCCcCCHHHHHHHHHHc
Confidence 77777542 1457899999999999999999999999998865432 34578999999999999999999999999
Q ss_pred --CCceecccCcccccCcccCCCCC------CC-CCCCCCCccccc-cceEEEECC---------CCCcCCCCceeeEEE
Q 014065 304 --GAPVLEAYAMTEATHLMSSNPLP------ED-GPHKPGSVGRPV-GQEIAILDE---------IGVPQEGGAKGEVCI 364 (431)
Q Consensus 304 --~~~i~~~yg~tE~~~~~~~~~~~------~~-~~~~~~~~G~~~-~~~~~i~d~---------~~~~~~~~~~Gel~v 364 (431)
++++++.||+||+++++...... .. ......++|+|+ +++++|+|+ ++++++.|+.|||++
T Consensus 313 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v 392 (552)
T PRK09274 313 PPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVV 392 (552)
T ss_pred CCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEEE
Confidence 47999999999998765543211 00 111234789999 899999984 467899999999999
Q ss_pred eCCccccccccCcchhhhccc---CC--ceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 365 RGPNVTKGYKNNPEANKSAFL---FG--WFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 365 ~~~~~~~gy~~~~~~~~~~~~---~g--~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|++++.||+++++.+...+. +| ||+|||+|++|+||++++.||.+|+||++|++|+|.|||.+.
T Consensus 393 ~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l 462 (552)
T PRK09274 393 AGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIF 462 (552)
T ss_pred ecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHH
Confidence 999999999999988877652 46 999999999999999999999999999999999999999763
No 27
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-61 Score=477.19 Aligned_cols=418 Identities=26% Similarity=0.372 Sum_probs=345.6
Q ss_pred HHHHHHHHHH-hcCCcceEEecC---CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 6 LIGLLNQVID-QFSSKRALSVSG---KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 6 l~~~l~~~a~-~~p~~~a~~~~~---~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
..++++++++ .+|+++|+++.+ .+++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 45 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v 124 (570)
T PRK04319 45 AYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNGAI 124 (570)
T ss_pred HHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 3467888776 479999998753 368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc----hhhhhhhccccccccccccCC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD----SELTLSLAHSESDTNAISKLT 157 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 157 (431)
++|+++.++.+++.++++.++++.++++......... .........+...+.. ....+..... ..........
T Consensus 125 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 201 (570)
T PRK04319 125 VGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDLPSLKHVLLVGEDVEEGPGTLDFNALME-QASDEFDIEW 201 (570)
T ss_pred EcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcCCCceEEEEECCCcCCCcCccCHHHHHh-hcCCcCCccc
Confidence 9999999999999999999999999998764332211 0111101111111110 0001111000 0011111223
Q ss_pred CCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC
Q 014065 158 NDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG 237 (431)
Q Consensus 158 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~ 237 (431)
..++++++++|||||||.||+|.++|.++..++......+++.+++++++..|++|.+++...++.++..|+++++...
T Consensus 202 ~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~- 280 (570)
T PRK04319 202 TDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGG- 280 (570)
T ss_pred cCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECC-
Confidence 4568899999999999999999999999998888777888899999999999999999988889999999999988653
Q ss_pred CCChhhHHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccc
Q 014065 238 RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEA 316 (431)
Q Consensus 238 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~ 316 (431)
.+++..+++.|+++++|+++++|++++.+.+.... ....+++++|.++++|+++++++.+++.+.++.++++.||+||+
T Consensus 281 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~ 360 (570)
T PRK04319 281 RFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWWMTET 360 (570)
T ss_pred CCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHhCCCeEeceeeccc
Confidence 67999999999999999999999999999876432 12345789999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeC--CccccccccCcchhhhcccCCceecCc
Q 014065 317 THLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRG--PNVTKGYKNNPEANKSAFLFGWFHTGD 393 (431)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~g~~~TGD 393 (431)
+..+...... ....++++|+|+ +++++|+|+++.+++.|+.|||++++ ++++.||+++++.+.+.|.+|||+|||
T Consensus 361 ~~~~~~~~~~--~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGD 438 (570)
T PRK04319 361 GGIMIANYPA--MDIKPGSMGKPLPGIEAAIVDDQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGD 438 (570)
T ss_pred CCEEEecCCC--CCCCCCcCcCCCCCCEEEEECCCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCc
Confidence 8765543221 234568999999 89999999999999999999999997 899999999999999989899999999
Q ss_pred eEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 394 IGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 394 ~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+++++++|++++.||.+|+||.+|++|+|.|||.+.
T Consensus 439 l~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l 474 (570)
T PRK04319 439 SAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKL 474 (570)
T ss_pred EEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHH
Confidence 999999999999999999999999999999999863
No 28
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5e-61 Score=472.18 Aligned_cols=420 Identities=25% Similarity=0.393 Sum_probs=342.6
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVA-AGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
.|+.+.|++.++.+|+++|++..+ +++||+||+++++++|+.|.+ .|+++||+|+++++|++++++++|||+++|+++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~-~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~ 102 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLG-KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIV 102 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECC-ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 589999999999999999998654 799999999999999999997 599999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccc-ccccch---h--------------------
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATAT-LLDADS---E-------------------- 138 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~-------------------- 138 (431)
+|++|..+.+++.++++.++++++|++.+......+............. ..+... .
T Consensus 103 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (562)
T PRK05677 103 VNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHLP 182 (562)
T ss_pred eecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccccCCc
Confidence 9999999999999999999999999987765544443322211111100 000000 0
Q ss_pred --hhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhc--CC-CCCeEEEecChhh
Q 014065 139 --LTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYK--LT-ESDSTVIVLPLFH 213 (431)
Q Consensus 139 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--~~-~~~~~~~~~p~~~ 213 (431)
..+..................++++++++|||||||.||+|.++|.++..++......+. .. ..+.+++.+|++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pl~h 262 (562)
T PRK05677 183 QAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLPLYH 262 (562)
T ss_pred ccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCcHHH
Confidence 000000000000011122345689999999999999999999999999877665554443 33 3468899999999
Q ss_pred HHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcH
Q 014065 214 VHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAP 293 (431)
Q Consensus 214 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~ 293 (431)
.+++...++..+..|.+.++.+. .+++..+++.|+++++|+++++|+++..+++..... ..+++++|.+++||+++++
T Consensus 263 ~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~lr~v~~gG~~~~~ 340 (562)
T PRK05677 263 IYAFTFHCMAMMLIGNHNILISN-PRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFR-KLDFSALKLTLSGGMALQL 340 (562)
T ss_pred HHHHHHHHHHHHHcCCeEEEecC-cccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccc-cCChhhceEEEEcCccCCH
Confidence 99988778888888888776553 468899999999999999999999999987754322 2346799999999999999
Q ss_pred HHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccc
Q 014065 294 VILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKG 372 (431)
Q Consensus 294 ~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~g 372 (431)
++.+.+.+.+++++++.||+||+++++..... ....++++|+|+ +.+++++|+++++++.|+.|||+++|+.++.|
T Consensus 341 ~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~---~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~Gel~v~g~~~~~g 417 (562)
T PRK05677 341 ATAERWKEVTGCAICEGYGMTETSPVVSVNPS---QAIQVGTIGIPVPSTLCKVIDDDGNELPLGEVGELCVKGPQVMKG 417 (562)
T ss_pred HHHHHHHHHcCCCeeccCCccccCcceeecCc---cCCCCCccCccCCCCEEEEECCCCCCCCCCCCeEEEEecCccchh
Confidence 99999999899999999999999877665442 234567899999 89999999999999999999999999999999
Q ss_pred cccCcchhhhccc-CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 373 YKNNPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 373 y~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+++++.+++.|. +|||+|||+|++|++|++++.||.+|+||++|.+|+|.|||.+.
T Consensus 418 Y~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l 475 (562)
T PRK05677 418 YWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVL 475 (562)
T ss_pred hcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHH
Confidence 9999999988885 79999999999999999999999999999999999999999863
No 29
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=6.8e-61 Score=469.13 Aligned_cols=422 Identities=31% Similarity=0.432 Sum_probs=349.6
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecC-CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSG-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
+..|+.+++.++++++|+++|+++.+ ++++||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 21 ~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~ 100 (537)
T PLN02246 21 NHLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGA 100 (537)
T ss_pred CCCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCE
Confidence 45689999999999999999998643 47899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc-hhhhhhhccccccccccccCCCC
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD-SELTLSLAHSESDTNAISKLTND 159 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 159 (431)
+++|++|..+.+++..+++.++++++|++....+.+......... ..+.+.... ....+....... ....+.....
T Consensus 101 ~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 177 (537)
T PLN02246 101 VTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGV--TVVTIDDPPEGCLHFSELTQAD-ENELPEVEIS 177 (537)
T ss_pred EEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCc--eEEEeCCCCCCceeHHHHhcCC-CCCCCCCCCC
Confidence 999999999999999999999999999998766655444321111 111111100 000011000000 0111223345
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH----HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS----VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
++++++++|||||||.||+|.++|.++......... .+++.++++++..+|++|.+++...++.++..|+++++.+
T Consensus 178 ~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 257 (537)
T PLN02246 178 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMP 257 (537)
T ss_pred ccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeC
Confidence 789999999999999999999999999877665433 4678899999999999999998877888999999999987
Q ss_pred CCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcc
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMT 314 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~t 314 (431)
.+++..+++.|+++++|++.++|+++..+.+..... ...++++|.+++||+++++++.+.+.+.+ ++.+++.||+|
T Consensus 258 --~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~t 334 (537)
T PLN02246 258 --KFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVE-KYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMT 334 (537)
T ss_pred --CCCHHHHHHHHHHhCceEEEcchHHHHHHhcCcccc-ccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEecccccc
Confidence 678999999999999999999999999998765432 23478999999999999999999999988 68899999999
Q ss_pred cccCcccCCCCC--CCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cCCce
Q 014065 315 EATHLMSSNPLP--EDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWF 389 (431)
Q Consensus 315 E~~~~~~~~~~~--~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~ 389 (431)
|++.+++.+... +.....++++|+|+ +++++++| +++++++.|+.|||+++|+.++.||+++++.+...+ .+|||
T Consensus 335 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~ 414 (537)
T PLN02246 335 EAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWL 414 (537)
T ss_pred ccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCe
Confidence 998765543211 11233567899999 89999999 568999999999999999999999999999888877 47999
Q ss_pred ecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 390 HTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 390 ~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|||+|+++++|++++.||.+|+||.+|++|+|.|||.+.
T Consensus 415 ~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l 454 (537)
T PLN02246 415 HTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALL 454 (537)
T ss_pred eecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHH
Confidence 9999999999999999999999999999999999999863
No 30
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.3e-61 Score=481.08 Aligned_cols=421 Identities=23% Similarity=0.327 Sum_probs=326.4
Q ss_pred cccHHHHHHHHHHhcCCcceEEec---CC-----CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHH
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVS---GK-----FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLA 74 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA 74 (431)
..|+.++|.+.++++|+++|+... ++ +.+||+|+.++++++|++|.+.|+++||+|+|+++|+++|+++++|
T Consensus 41 ~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA 120 (660)
T PLN02430 41 ITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEA 120 (660)
T ss_pred CCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 468999999999999999999642 11 2479999999999999999999999999999999999999999999
Q ss_pred HHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHH-HHHHhcCcccccccccccchh------------hhh
Q 014065 75 VIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQ-AAASKLNISHATATLLDADSE------------LTL 141 (431)
Q Consensus 75 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------------~~~ 141 (431)
|+++|++++|+++.++.+++.++++.++++++|++........ ...........++.+.+.... ..+
T Consensus 121 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 200 (660)
T PLN02430 121 CAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSW 200 (660)
T ss_pred HHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEH
Confidence 9999999999999999999999999999999999865322111 111111111111111110000 000
Q ss_pred hhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH-----hcCCCCCeEEEecChhhHHH
Q 014065 142 SLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV-----YKLTESDSTVIVLPLFHVHG 216 (431)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~~ 216 (431)
..................++++++++|||||||.||||++||++++.++...... .++.++|++++.+|++|.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~ 280 (660)
T PLN02430 201 IDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILD 280 (660)
T ss_pred HHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHH
Confidence 0000000000111223457899999999999999999999999998877654332 14678999999999999999
Q ss_pred HHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCC-----------------------
Q 014065 217 MLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK----------------------- 273 (431)
Q Consensus 217 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~----------------------- 273 (431)
+.. ...++..|+++++.+. ++..+++.+.+++||++.++|.+|+.+.+.....
T Consensus 281 ~~~-~~~~l~~G~~i~~~~~---~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (660)
T PLN02430 281 RMI-EEYFFRKGASVGYYHG---DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWM 356 (660)
T ss_pred HHH-HHHHHHcCCEEEEeCC---ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 877 4567899999987642 6788999999999999999999999886531100
Q ss_pred ------C-CC--------------CCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCC
Q 014065 274 ------P-EP--------------VYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHK 332 (431)
Q Consensus 274 ------~-~~--------------~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~ 332 (431)
. .. ..+++|.+++||+++++++.+.++...++.+++.||+||+++..+.... .....
T Consensus 357 ~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~--~~~~~ 434 (660)
T PLN02430 357 NRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFP--DEMCM 434 (660)
T ss_pred hcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeecc--ccCCC
Confidence 0 00 0158999999999999998765554334789999999999876665432 12345
Q ss_pred CCCccccc-cceEEEEC--CCC-CcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCeEEEecc
Q 014065 333 PGSVGRPV-GQEIAILD--EIG-VPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGR 408 (431)
Q Consensus 333 ~~~~G~~~-~~~~~i~d--~~~-~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR 408 (431)
.+++|+|. +++++++| +.| .+++.+..|||+|+||+++.||+++++.+++.|.+|||+|||+|++|+||++++.||
T Consensus 435 ~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~dG~l~i~gR 514 (660)
T PLN02430 435 LGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILPNGVLKIIDR 514 (660)
T ss_pred CCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECCCCcEEEEEc
Confidence 68999999 79999987 333 455666789999999999999999999999999999999999999999999999999
Q ss_pred cccceec-CCeeccccceeccc
Q 014065 409 IKELINR-GGNLHESISLFLAK 429 (431)
Q Consensus 409 ~~d~i~~-~G~~i~~~~iE~a~ 429 (431)
++|+||. +|++|+|.+||.+.
T Consensus 515 ~kd~ik~~~G~~V~p~~IE~~l 536 (660)
T PLN02430 515 KKNLIKLSQGEYVALEYLENVY 536 (660)
T ss_pred ccccEEcCCCcEEchHHHHHHH
Confidence 9999994 79999999999753
No 31
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-61 Score=466.04 Aligned_cols=408 Identities=26% Similarity=0.407 Sum_probs=347.8
Q ss_pred cHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVA-AGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
.+.+.|+++|+.+|+++|+++. ++++||+||+++++++|++|++ .|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~-~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~ 81 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITE-EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAV 81 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEEC-CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEE
Confidence 5789999999999999999975 4799999999999999999986 6999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCe
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDV 163 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (431)
|+++.++.+++..+++.++++.++++++................. +.+.+ +..... ...........+++
T Consensus 82 ~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~---~~~~~~~~~~~~~~ 151 (496)
T PRK06839 82 PLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRV-ISITS------LKEIED---RKIDNFVEKNESAS 151 (496)
T ss_pred ecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceE-EEecc------hHhhhc---cCCCCCCCCCCCCc
Confidence 999999999999999999999999988765554443322211111 11111 000000 00111223456889
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhh
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAST 243 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 243 (431)
++++|||||||.||+|.++|.++..+.......+++..+++++..+|++|.+++...++.++..|+++++++ .+++..
T Consensus 152 ~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~--~~~~~~ 229 (496)
T PRK06839 152 FIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPR--KFEPTK 229 (496)
T ss_pred EEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEcc--CCCHHH
Confidence 999999999999999999999998777666677788899999999999999998887788999999999877 789999
Q ss_pred HHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCC
Q 014065 244 FWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSN 323 (431)
Q Consensus 244 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~ 323 (431)
+++.++++++|++.++|++++.+++..... ..+++++|.+++||++++++..+.+.+. ++++.+.||+||++..+...
T Consensus 230 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~~~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~ 307 (496)
T PRK06839 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFE-TTNLQSVRWFYNGGAPCPEELMREFIDR-GFLFGQGFGMTETSPTVFML 307 (496)
T ss_pred HHHHHHhhCCeEEEehHHHHHHHHhCcccc-cCCCcccceEEECCCCCCHHHHHHHHHh-CCeeEeeccCCCCCcceEec
Confidence 999999999999999999999998875433 3457899999999999999999999886 99999999999998755443
Q ss_pred CCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCe
Q 014065 324 PLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGY 402 (431)
Q Consensus 324 ~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~ 402 (431)
.. .......+++|+|+ +.+++|+|++++.++.|+.|||+++|+.++.||+++++.+...+.+|||+|||++++|++|+
T Consensus 308 ~~-~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~ 386 (496)
T PRK06839 308 SE-EDARRKVGSIGKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVDEDGF 386 (496)
T ss_pred cc-ccccccCCCCcccCCCceEEEECCCcCCCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEcCCCc
Confidence 22 22345667999999 89999999999999999999999999999999999999988888899999999999999999
Q ss_pred EEEecccccceecCCeeccccceecc
Q 014065 403 LHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 403 l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
+++.||.+|+||.+|++|+|.+||.+
T Consensus 387 ~~~~GR~~d~i~~~G~~v~p~~iE~~ 412 (496)
T PRK06839 387 VYIVGRKKEMIISGGENIYPLEVEQV 412 (496)
T ss_pred EEEeccccceEEECCEEECHHHHHHH
Confidence 99999999999999999999999975
No 32
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.5e-61 Score=471.37 Aligned_cols=418 Identities=29% Similarity=0.430 Sum_probs=352.2
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAA-GINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~-gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
...|+.++|.+.++.+|+++|+++.+ +++||+||.++++++|+.|.+. |+++||+|+++++|+++++++++||+++|+
T Consensus 8 ~~~tl~~~l~~~a~~~~~~~a~~~~~-~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 86 (546)
T PRK08314 8 PETSLFHNLEVSARRYPDKTAIVFYG-RAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANA 86 (546)
T ss_pred CCCCHHHHHHHHHHHcCCCcceeecC-ceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCc
Confidence 46789999999999999999999765 6999999999999999999999 999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccc-cccc---c--------------------
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATAT-LLDA---D-------------------- 136 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~-------------------- 136 (431)
+++|++|..+.+++.++++.++++.+|++...................... ..+. .
T Consensus 87 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (546)
T PRK08314 87 VVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALAP 166 (546)
T ss_pred EEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccccccc
Confidence 999999999999999999999999999998766655544332211111100 0000 0
Q ss_pred -hhhhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHH
Q 014065 137 -SELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVH 215 (431)
Q Consensus 137 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 215 (431)
....+.... ............++++++++|||||||.||+|.++|.+++.++......+++..+|++++.+|++|.+
T Consensus 167 ~~~~~~~~~~--~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~ 244 (546)
T PRK08314 167 GGVVAWKEAL--AAGLAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLPLFHVT 244 (546)
T ss_pred cccccHHHHh--cccCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEEEcCchHHH
Confidence 000000000 00001122334678999999999999999999999999999888888888899999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHH
Q 014065 216 GMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVI 295 (431)
Q Consensus 216 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~ 295 (431)
|+...++.++..|+++++.+ .+++..+++.++++++|++.++|+++..++...... ..+++++|.+++||+++++++
T Consensus 245 g~~~~~~~~l~~G~~i~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~-~~~~~~l~~~~~gG~~~~~~~ 321 (546)
T PRK08314 245 GMVHSMNAPIYAGATVVLMP--RWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLA-ERDLSSLRYIGGGGAAMPEAV 321 (546)
T ss_pred HHHHHHHHHHHcCCeEEecC--CCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCcc-ccCchhhheeeeccccCCHHH
Confidence 99888999999999999987 678999999999999999999999999988764322 344789999999999999999
Q ss_pred HHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCcccccc
Q 014065 296 LSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGY 373 (431)
Q Consensus 296 ~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy 373 (431)
.+++.+.++.++++.||+||++........ .....+++|+|+ +.+++++| +++++++.|+.|||+++|++++.||
T Consensus 322 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~---~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY 398 (546)
T PRK08314 322 AERLKELTGLDYVEGYGLTETMAQTHSNPP---DRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVFKGY 398 (546)
T ss_pred HHHHHHHcCCcEEecccccccccceecCCC---cCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchhccc
Confidence 999999999999999999999877655432 123457899999 89999999 4689999999999999999999999
Q ss_pred ccCcchhhhccc--C--CceecCceEEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 374 KNNPEANKSAFL--F--GWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 374 ~~~~~~~~~~~~--~--g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
+++++.+++.|. + +||+|||+|+++++|++++.||.||+||++|++|+|.|||.+
T Consensus 399 ~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~ 457 (546)
T PRK08314 399 WNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENL 457 (546)
T ss_pred cCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHH
Confidence 999888887763 2 499999999999999999999999999999999999999986
No 33
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=8.6e-61 Score=467.91 Aligned_cols=416 Identities=29% Similarity=0.386 Sum_probs=346.6
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..|+.++|++.|+.+|+++|++..+ +++||+||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 20 ~~~l~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~ 98 (542)
T PRK06155 20 ERTLPAMLARQAERYPDRPLLVFGG-TRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIA 98 (542)
T ss_pred ccCHHHHHHHHHHHCCCCeEEEeCC-ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEE
Confidence 4679999999999999999999755 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccch---hhhhhhccccccccccccCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADS---ELTLSLAHSESDTNAISKLTND 159 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 159 (431)
+|+++.++.+++.++++.+++++++++.+....+.............+.+..... ...+..................
T Consensus 99 vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (542)
T PRK06155 99 VPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPLPPLDAPAPAAAVQ 178 (542)
T ss_pred EEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhhcccCCCCCCCCCC
Confidence 9999999999999999999999999998766555443222100011111111100 0000000000000111122345
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRF 239 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~ 239 (431)
++++++++|||||||.||+|.++|.++..........+++.+++++++.+|++|..++.. ++.++..|+++++.+ .+
T Consensus 179 ~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~-~~~~l~~G~~~~~~~--~~ 255 (542)
T PRK06155 179 PGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNA-FFQALLAGATYVLEP--RF 255 (542)
T ss_pred CCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHH-HHHHHHcCceEEeeC--CC
Confidence 789999999999999999999999999888777778888999999999999999999876 789999999999977 67
Q ss_pred ChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCc
Q 014065 240 SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHL 319 (431)
Q Consensus 240 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~ 319 (431)
++..++..|+++++|++.++|+++..+.+..... ....+++|.++.+| +++.+.+.+++.+++++++.||+||++..
T Consensus 256 ~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~YG~tE~~~~ 332 (542)
T PRK06155 256 SASGFWPAVRRHGATVTYLLGAMVSILLSQPARE-SDRAHRVRVALGPG--VPAALHAAFRERFGVDLLDGYGSTETNFV 332 (542)
T ss_pred CHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCcc-ccccCceEEEEEcC--CCHHHHHHHHHHcCCCEEeeecccccCcc
Confidence 8999999999999999999999999988765433 23456788777555 57899999999999999999999999877
Q ss_pred ccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCC---ccccccccCcchhhhcccCCceecCceE
Q 014065 320 MSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGP---NVTKGYKNNPEANKSAFLFGWFHTGDIG 395 (431)
Q Consensus 320 ~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~g~~~TGD~~ 395 (431)
+.... ....++++|.|. +.+++|+|+++++++.|+.|||+++++ +++.||+++++.+.+.|.++||+|||+|
T Consensus 333 ~~~~~----~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~ 408 (542)
T PRK06155 333 IAVTH----GSQRPGSMGRLAPGFEARVVDEHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRV 408 (542)
T ss_pred ccCCC----CCCCCCCcCccCCCceEEEECCCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceE
Confidence 65532 234567899998 899999999999999999999999998 6899999999999888889999999999
Q ss_pred EEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 396 YFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 396 ~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
++++||++++.||.+|+||++|++|+|.|||.+.
T Consensus 409 ~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l 442 (542)
T PRK06155 409 VRDADGWFRFVDRIKDAIRRRGENISSFEVEQVL 442 (542)
T ss_pred EEcCCceEEEEecCCCEEEeCCEEECHHHHHHHH
Confidence 9999999999999999999999999999999863
No 34
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=4e-62 Score=454.42 Aligned_cols=419 Identities=26% Similarity=0.381 Sum_probs=338.9
Q ss_pred cccHHHHHHHHHHhcCCcceEEecC-------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSG-------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAV 75 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~-------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 75 (431)
-.|+.+.|.+.+..+|+.+++.+.. .+.+||+|..+++.+++.+|+..|+++++.|+|+..|+++|+++.+||
T Consensus 74 ~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~ 153 (691)
T KOG1256|consen 74 PLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMAC 153 (691)
T ss_pred cccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHH
Confidence 4689999999999999999997643 268899999999999999999999999999999999999999999999
Q ss_pred HHhCcEEEecCCCCCHHHHHHHHhcCCceEEEec-CCchhHHHHHHHhcCc--ccccccccccchh------------hh
Q 014065 76 IRARATAAPLNAAYTPDEFEFYLSDSESKLLLTP-AEGNAAAQAAASKLNI--SHATATLLDADSE------------LT 140 (431)
Q Consensus 76 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~------------~~ 140 (431)
...|++++|+..+++++.+.++++.+.+.++|++ ++....+.+....... -..++.+.+.... ..
T Consensus 154 ~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v~S 233 (691)
T KOG1256|consen 154 YAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEVYS 233 (691)
T ss_pred HhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEEEE
Confidence 9999999999999999999999999999999999 4455555555443212 1222222222110 11
Q ss_pred hhhcccccccccccc-CCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHH---HHHh---cCCCCCeEEEecChhh
Q 014065 141 LSLAHSESDTNAISK-LTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNI---KSVY---KLTESDSTVIVLPLFH 213 (431)
Q Consensus 141 ~~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~---~~~~---~~~~~~~~~~~~p~~~ 213 (431)
+.....-........ .++.+++.+.|+|||||||.||||++||.|+.+.+... .... ....+|++++++|+.|
T Consensus 234 ~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAH 313 (691)
T KOG1256|consen 234 WDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAH 313 (691)
T ss_pred HHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHH
Confidence 111111111122222 57789999999999999999999999999998865432 1111 2234699999999999
Q ss_pred HHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCC--------------------
Q 014065 214 VHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK-------------------- 273 (431)
Q Consensus 214 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-------------------- 273 (431)
++..+. -...++.|+.+.+..+ |+..+...+++.+||.+.++|.+|+++-+...+.
T Consensus 314 i~er~~-~~~~~~~G~~IgF~~g---D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~ 389 (691)
T KOG1256|consen 314 IFERVV-ELYTFYIGAKIGFARG---DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKL 389 (691)
T ss_pred HHHHHH-HHhHhhcccEEEEecC---ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 999988 4555689999999864 8999999999999999999999999976532211
Q ss_pred -------CC--C---------------CCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCC
Q 014065 274 -------PE--P---------------VYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDG 329 (431)
Q Consensus 274 -------~~--~---------------~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~ 329 (431)
.. . .-..+|.+++|++|++++..+.++..+|++++++||+||+++.++.... .
T Consensus 390 ~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~---~ 466 (691)
T KOG1256|consen 390 EHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLP---G 466 (691)
T ss_pred HHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccC---C
Confidence 00 0 1268899999999999999999999999999999999999955555433 2
Q ss_pred CCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cCCceecCceEEEcCCCeEEEe
Q 014065 330 PHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLV 406 (431)
Q Consensus 330 ~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~ 406 (431)
....+++|.|+ +++++++| ++-..-+.+..||||++|++++.||+++|+.|++.+ .|||++|||+|+++++|.+.+.
T Consensus 467 d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G~l~Ii 546 (691)
T KOG1256|consen 467 DNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPNGTLKII 546 (691)
T ss_pred CCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECCCccEEEE
Confidence 33789999999 79999998 444444455579999999999999999999999999 6799999999999999999999
Q ss_pred ccccccee-cCCeeccccceecc
Q 014065 407 GRIKELIN-RGGNLHESISLFLA 428 (431)
Q Consensus 407 gR~~d~i~-~~G~~i~~~~iE~a 428 (431)
||+++++| .+|+.|.|+.||-+
T Consensus 547 dRkK~ifklaqGEyVaPe~IEni 569 (691)
T KOG1256|consen 547 DRKKNIFKLAQGEYVAPEKIENI 569 (691)
T ss_pred ecccceEEcCCCCccChHHHHHH
Confidence 99999999 78999999999964
No 35
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=2.9e-61 Score=473.35 Aligned_cols=414 Identities=28% Similarity=0.415 Sum_probs=335.4
Q ss_pred cHHHHHHHHHHhcCCcceEEecC-CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSG-KFDLTYSRIHELVERAASRLVA-AGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~-~~~~Ty~el~~~~~~~a~~L~~-~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
++.+.+... +.+|+++|+++.. +.++||+||.++++++|++|.+ .|+++||+|+++++|+++++++++||+++|+++
T Consensus 41 ~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~ 119 (560)
T PLN02574 41 DAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIV 119 (560)
T ss_pred CHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEE
Confidence 444444444 6789999999743 3489999999999999999999 999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccccc---c----hhhhhhhcccccccccccc
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA---D----SELTLSLAHSESDTNAISK 155 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~ 155 (431)
+|++|..+.+++.++++.++++.++++.+..+.... .... .+..... + ....+..... ........
T Consensus 120 v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 192 (560)
T PLN02574 120 TTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSP----LGVP--VIGVPENYDFDSKRIEFPKFYELIK-EDFDFVPK 192 (560)
T ss_pred eCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHh----cCCc--EEecCcccccccCccCcccHHHHhh-cCCccccc
Confidence 999999999999999999999999998765443322 1111 1100000 0 0000110000 00111112
Q ss_pred CCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH----hc-CCCCCeEEEecChhhHHHHHHHHHHHHhcCCE
Q 014065 156 LTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV----YK-LTESDSTVIVLPLFHVHGMLAGLLSSFAAGAA 230 (431)
Q Consensus 156 ~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~----~~-~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~ 230 (431)
....++++++++|||||||.||+|.++|.++...+..+... .. ...+++++..+|++|.+++...++.++..|++
T Consensus 193 ~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~ 272 (560)
T PLN02574 193 PVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGST 272 (560)
T ss_pred CCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCE
Confidence 23456899999999999999999999999998777655431 22 23567889999999999998878888899999
Q ss_pred EEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceec
Q 014065 231 VTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLE 309 (431)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~ 309 (431)
+++.+ .+++..+++.++++++|++.++|+++..+++........+++++|.+++||++++++.++.+.+.+ ++.+++
T Consensus 273 ~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~ 350 (560)
T PLN02574 273 IVVMR--RFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQ 350 (560)
T ss_pred EEEec--CCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEe
Confidence 99887 689999999999999999999999999998875432334578999999999999999999999888 789999
Q ss_pred ccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cC
Q 014065 310 AYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LF 386 (431)
Q Consensus 310 ~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~ 386 (431)
.||+||++.+...... .......+++|+|. +++++|+| ++|++++.|+.||||++|++++.||+++++.+.+.| .+
T Consensus 351 ~YG~tE~~~~~~~~~~-~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~ 429 (560)
T PLN02574 351 GYGMTESTAVGTRGFN-TEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKD 429 (560)
T ss_pred cccccccCceeecCCC-ccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCC
Confidence 9999999866543222 12234567899999 89999999 679999999999999999999999999999888777 47
Q ss_pred CceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 387 GWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 387 g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|||+|||+|++|++|++++.||.+|+||++|++|+|.|||.+.
T Consensus 430 g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l 472 (560)
T PLN02574 430 GWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVL 472 (560)
T ss_pred CCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHH
Confidence 9999999999999999999999999999999999999999753
No 36
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.9e-61 Score=483.25 Aligned_cols=401 Identities=23% Similarity=0.315 Sum_probs=336.3
Q ss_pred CCcccHHHHHHHHHHh--cCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHh
Q 014065 1 MEGVTLIGLLNQVIDQ--FSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRA 78 (431)
Q Consensus 1 m~~~tl~~~l~~~a~~--~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 78 (431)
|-..|+.++|.+.++. +||++|++. + ..+||+||+++++++|+.|.+.|+++||+|+++++|+++++++++||+++
T Consensus 1 ~~~~~~~~~~~~~a~~~~~pd~~a~~~-~-~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~a 78 (705)
T PRK06060 1 MRNGNLAGLLAEQASEAGWYDRPAFYA-A-DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLAR 78 (705)
T ss_pred CCCcCHHHHHHHHHhhccCCCceEEEe-c-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 5667899999998886 799999985 3 48999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCC
Q 014065 79 RATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTN 158 (431)
Q Consensus 79 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (431)
|++++|++|.++.+++.++++.++++++|++......... . ..... .. .+... ....+......
T Consensus 79 G~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~----~----~~~~~---~~--~~~~~---~~~~~~~~~~~ 142 (705)
T PRK06060 79 GVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQP----S----RVAEA---AE--LMSEA---ARVAPGGYEPM 142 (705)
T ss_pred CcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcc----c----ccchh---hh--hhhhc---cccCCCCCCCC
Confidence 9999999999999999999999999999998653322110 0 00000 00 00000 00001111233
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHH-HHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIK-SVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG 237 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~ 237 (431)
.++++++++|||||||.||+|.++|.++...+..+. ..+++.++++++...|++|.+++...++.++..|+++++.+.
T Consensus 143 ~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~- 221 (705)
T PRK06060 143 GGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSA- 221 (705)
T ss_pred CCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCC-
Confidence 568899999999999999999999999988776653 467888999999999999999887778889999999998763
Q ss_pred CCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccc
Q 014065 238 RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEA 316 (431)
Q Consensus 238 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~ 316 (431)
.+++..++..+.++++|+++++|+++..+++.... ..++++|.+++||+++++++.+++.+.+ ++++++.||+||+
T Consensus 222 ~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~---~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 298 (705)
T PRK06060 222 PVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP---DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEV 298 (705)
T ss_pred CCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc---ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeecccc
Confidence 46888889999999999999999999999875432 2468999999999999999999999988 5899999999999
Q ss_pred cCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceE
Q 014065 317 THLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIG 395 (431)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~ 395 (431)
+..+..+.. .....+++|+|+ +++++|+|++|++++.|+.|||+++|++++.||+++++.+.. .+|||+|||+|
T Consensus 299 ~~~~~~~~~---~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~--~~~~~~TGDl~ 373 (705)
T PRK06060 299 GQTFVSNRV---DEWRLGTLGRVLPPYEIRVVAPDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPVA--NEGWLDTRDRV 373 (705)
T ss_pred CceEEeccC---CCCCcCcccccCCCcEEEEECCCCCCCCCCCceEEEEccchhhhhhhCCCccccc--CCCcEECCeeE
Confidence 866544322 234567899999 799999999999999999999999999999999998876432 46899999999
Q ss_pred EEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 396 YFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 396 ~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
++++||++++.||.||+||++|++|+|.|||.+
T Consensus 374 ~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~ 406 (705)
T PRK06060 374 CIDSDGWVTYRCRADDTEVIGGVNVDPREVERL 406 (705)
T ss_pred EECCCceEEEecccCceEEECCEEECHHHHHHH
Confidence 999999999999999999999999999999985
No 37
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.7e-61 Score=476.03 Aligned_cols=424 Identities=21% Similarity=0.287 Sum_probs=335.9
Q ss_pred HHHHHHHHHHhcCCcceEEec-----CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 6 LIGLLNQVIDQFSSKRALSVS-----GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 6 l~~~l~~~a~~~p~~~a~~~~-----~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
..++|+++++.+|+++|+++. +.+++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++|+
T Consensus 55 ~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 134 (629)
T PRK10524 55 CHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGA 134 (629)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 366788888889999999873 236899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCc---------hhHHHHHHHhcCc-ccccccccccc--------hhhhhh
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG---------NAAAQAAASKLNI-SHATATLLDAD--------SELTLS 142 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~ 142 (431)
+++|++|.++.+++.++++.++++++|+++.. .+.+.+....... ....+.+.... ....+.
T Consensus 135 v~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 214 (629)
T PRK10524 135 IHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMARVAGRDVDYA 214 (629)
T ss_pred EEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCCcccHH
Confidence 99999999999999999999999999997642 2222222222111 11111111000 000000
Q ss_pred hccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHH-HHHHHhcCCCCCeEEEecChhhHHHHHHHH
Q 014065 143 LAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVS-NIKSVYKLTESDSTVIVLPLFHVHGMLAGL 221 (431)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 221 (431)
...........+.....++++++++|||||||.||+|.++|.+++.... .....+++.+++++++..|++|..++...+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 294 (629)
T PRK10524 215 TLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIV 294 (629)
T ss_pred HHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHH
Confidence 0000000011111224568899999999999999999999998764443 344566888999999999999998887778
Q ss_pred HHHHhcCCEEEeCCCC--CCChhhHHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCCcHHHHHH
Q 014065 222 LSSFAAGAAVTLPAAG--RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVILSR 298 (431)
Q Consensus 222 ~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~~~~ 298 (431)
+.++..|+++++.++. ..++..+++.++++++|+++++|+.++.+.+.... ....+++++|.++++|+++++++.++
T Consensus 295 ~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~ 374 (629)
T PRK10524 295 YAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASW 374 (629)
T ss_pred HHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHH
Confidence 9999999999987642 34788999999999999999999999998765432 12345789999999999999999999
Q ss_pred HHHHhCCceecccCcccccCcccCCCCC-CCCCCCCCCccccc-cceEEEECC-CCCcCCCCceeeEEEeCC---ccccc
Q 014065 299 LEEAFGAPVLEAYAMTEATHLMSSNPLP-EDGPHKPGSVGRPV-GQEIAILDE-IGVPQEGGAKGEVCIRGP---NVTKG 372 (431)
Q Consensus 299 ~~~~~~~~i~~~yg~tE~~~~~~~~~~~-~~~~~~~~~~G~~~-~~~~~i~d~-~~~~~~~~~~Gel~v~~~---~~~~g 372 (431)
+.+.+++++++.||+||++..+...... +......+++|+|+ |++++|+|+ +|++++.|+.|||+++|| +.+.|
T Consensus 375 ~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~ 454 (629)
T PRK10524 375 ISEALGVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQT 454 (629)
T ss_pred HHHhcCCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcCCCChhhcCC
Confidence 9999999999999999998543332211 11234568899999 899999998 899999999999999998 57789
Q ss_pred cccCcchhhhcc----cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 373 YKNNPEANKSAF----LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 373 y~~~~~~~~~~~----~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+++++.+.+.+ .++||+|||+|++|+||++++.||.||+||++|.+|+|.|||.+.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l 515 (629)
T PRK10524 455 VWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESI 515 (629)
T ss_pred ccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHH
Confidence 999887765543 358999999999999999999999999999999999999999864
No 38
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-60 Score=465.95 Aligned_cols=422 Identities=27% Similarity=0.389 Sum_probs=343.6
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
.+|+.++|...|+++|+++|+.+.+ +++||+||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 6 ~~~~~~~~~~~a~~~p~~~a~~~~~-~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~ 84 (528)
T PRK07470 6 VMNLAHFLRQAARRFPDRIALVWGD-RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVW 84 (528)
T ss_pred CCCHHHHHHHHHHHCCCceEEEECC-ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEE
Confidence 4689999999999999999998755 799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+++++..+.+++.++++.++++.++++.+..+...............+.+........+..................+++
T Consensus 85 v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (528)
T PRK07470 85 VPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVARHLGARVANAAVDHDD 164 (528)
T ss_pred EecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhcCCCCCCCcccCCCCC
Confidence 99999999999999999999999999987655544433222111111111111000011100000001111223346789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh--cCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCC
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVY--KLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFS 240 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~ 240 (431)
+++++|||||||.||+|.++|.++...+....... +..+.++++..+|++|.+++.. ++ .+..|++.++.+...++
T Consensus 165 ~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~-~~~~g~~~~~~~~~~~~ 242 (528)
T PRK07470 165 PCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQ-LC-QVARGAATVLLPSERFD 242 (528)
T ss_pred eEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHH-HH-HHhcCceEEEecccCcC
Confidence 99999999999999999999999876554332222 5677899999999999998864 44 56777777776655679
Q ss_pred hhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcc
Q 014065 241 ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320 (431)
Q Consensus 241 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~ 320 (431)
+..+++.|+++++|++.++|++++.+.+..... ..+++++|.+++||+++++...+++.+.++..+++.||+||+++.+
T Consensus 243 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~ 321 (528)
T PRK07470 243 PAEVWALVERHRVTNLFTVPTILKMLVEHPAVD-RYDHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGEVTGNI 321 (528)
T ss_pred HHHHHHHHHhcCCeEEechHHHHHHHHhCcCcC-CCCCcceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCCcccCCce
Confidence 999999999999999999999999998765432 3457899999999999999999999888899999999999998766
Q ss_pred cCCCCC----CC-CCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCce
Q 014065 321 SSNPLP----ED-GPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDI 394 (431)
Q Consensus 321 ~~~~~~----~~-~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~ 394 (431)
...... +. .....+++|+|+ +++++++|++|++++.|+.|||+++|+.++.||+++++.++..|.+|||+|||+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl 401 (528)
T PRK07470 322 TVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDL 401 (528)
T ss_pred eecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEeccee
Confidence 543211 00 123456889999 899999999999999999999999999999999999999988889999999999
Q ss_pred EEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 395 GYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 395 ~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
++++++|++++.||.||+||++|++|+|.+||.+
T Consensus 402 ~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~ 435 (528)
T PRK07470 402 GHLDARGFLYITGRASDMYISGGSNVYPREIEEK 435 (528)
T ss_pred EEEccCCeEEEeCCccceEEeCCEEECHHHHHHH
Confidence 9999999999999999999999999999999976
No 39
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=8.4e-62 Score=461.63 Aligned_cols=400 Identities=35% Similarity=0.597 Sum_probs=318.5
Q ss_pred HHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCC
Q 014065 10 LNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAY 89 (431)
Q Consensus 10 l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 89 (431)
|+++|+++||++|+++.+++++||+||+++++++|..|++.|+++||+|+++++|+++++++++||+++|++++|++|.+
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 67899999999999983447999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCceEEEe----cCCchhHHHHHHHhcCcccccccccccc--hhhhhhhccccccccccccCC-CCCCC
Q 014065 90 TPDEFEFYLSDSESKLLLT----PAEGNAAAQAAASKLNISHATATLLDAD--SELTLSLAHSESDTNAISKLT-NDPSD 162 (431)
Q Consensus 90 ~~~~l~~~l~~~~~~~ii~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~ 162 (431)
+.+++.++++.++++++|+ +......+...............+.... ....+.......... .. ..+++
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 156 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASLSDEPQ----SPEDSPDD 156 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHHCHCSH----STTHTTTS
T ss_pred ccccccccccccceeEEEEeccccccccccchhhhccccccccccccccccccccccccccccccccc----cCCCCccc
Confidence 9999999999999999997 2211111222222111112121111110 000011000000000 00 05699
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHH--HHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCC-C
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIK--SVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGR-F 239 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~-~ 239 (431)
+++++|||||||.||+|.++|.++++.+..+. ...+++ +++++.+|++|.+++...++.++..|+++++++... .
T Consensus 157 ~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~ 234 (417)
T PF00501_consen 157 PAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDLF 234 (417)
T ss_dssp EEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHH
T ss_pred eeEeeccccccccccccccccccccccccccccccccccC--ceEEeecccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999998887764 222333 599999999999999677999999999999987311 1
Q ss_pred ChhhHHHHHHHhcceeeecchHHHHHHHhcccCC---CCCCCCCccEEEeccCCCcHHHHHHHHHHhCC-ceecccCccc
Q 014065 240 SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK---PEPVYPKLRFIRSCSASLAPVILSRLEEAFGA-PVLEAYAMTE 315 (431)
Q Consensus 240 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~---~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~-~i~~~yg~tE 315 (431)
++..+++.+++++++++.++|++++.+++..... ...+++++|.++++|++++++..+.+++.++. ++++.||+||
T Consensus 235 ~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE 314 (417)
T PF00501_consen 235 DPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTE 314 (417)
T ss_dssp HHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGG
T ss_pred ccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceecccccc
Confidence 2467899999999999999999999999843222 13458889999999999999999999999986 9999999999
Q ss_pred ccCcccCCCCCCCCCCCCCCccccc-cceEEEECCC-CCcCCCCceeeEEEeCCccccccccCcchhhhcccC-CceecC
Q 014065 316 ATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEI-GVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF-GWFHTG 392 (431)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~-~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TG 392 (431)
++.++.... ........+++|.|+ +++++|+|++ +++++.|+.|||+++||.++.||+++++.+++.|.+ |||+||
T Consensus 315 ~~~~~~~~~-~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TG 393 (417)
T PF00501_consen 315 TGSIATIRP-PEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTG 393 (417)
T ss_dssp GSSEEEEEE-TTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEE
T ss_pred cceeeeccc-ccccccccccccccccccccccccccccccccccccccccccCCccceeeeccccccccccccccceecc
Confidence 999887542 112334677899998 8999999977 999999999999999999999999999999998876 899999
Q ss_pred ceEEEcCCCeEEEecccccceecC
Q 014065 393 DIGYFDSDGYLHLVGRIKELINRG 416 (431)
Q Consensus 393 D~~~~~~~g~l~~~gR~~d~i~~~ 416 (431)
|+|++|+||+++++||.||+||++
T Consensus 394 D~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 394 DLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EEEEEETTSEEEEEEEGSCEEEET
T ss_pred eEEEECCCCeEEEEEeeCCEEEeC
Confidence 999999999999999999999863
No 40
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.6e-61 Score=468.78 Aligned_cols=417 Identities=20% Similarity=0.248 Sum_probs=332.0
Q ss_pred ccHHHHHHHHHHhcCCcceEEecC-CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSG-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
.|+.+.|.+.|+++|+++|+++.+ ++++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 14 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~ 93 (540)
T PRK05857 14 STVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIA 93 (540)
T ss_pred cchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEE
Confidence 578999999999999999998644 4689999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|+++.++.+++.++++.++++.+|+++........+........ .+.. +.......... ...............++
T Consensus 94 v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 170 (540)
T PRK05857 94 VMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIP-VIAV-DIAAVTRESEH-SLDAASLAGNADQGSED 170 (540)
T ss_pred EecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccc-eeEe-ecccccccccc-cccccccccccCCCCCC
Confidence 999999999999999999999999999864322111111100000 0011 10000000000 00000011123346789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHH----HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCC
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS----VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGR 238 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~ 238 (431)
+++++|||||||.||+|.++|.++.++...... .+++..+++.+..+|++|.++++. .+.++..|+++++.+
T Consensus 171 ~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~-~~~~l~~G~~~v~~~--- 246 (540)
T PRK05857 171 PLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWW-ILTCLMHGGLCVTGG--- 246 (540)
T ss_pred eEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHH-HHHHhhcceeEEecC---
Confidence 999999999999999999999999876543321 235567889999999999999876 778899999887643
Q ss_pred CChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccC
Q 014065 239 FSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATH 318 (431)
Q Consensus 239 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~ 318 (431)
.++..+++.|+++++|+++++|++++.+....... ..+++++|.+++||++++....+ +.+.+++++++.||+||++.
T Consensus 247 ~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~-~~~~~~lr~~~~gG~~~~~~~~~-~~~~~g~~i~~~YG~TE~~~ 324 (540)
T PRK05857 247 ENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSA-NATVPSLRLVGYGGSRAIAADVR-FIEATGVRTAQVYGLSETGC 324 (540)
T ss_pred CChhHHHHHHHhcCcceEEeChHHHHHHHhccccC-CCcCccceEEEEcCccCCchhHH-HHHHhCCeeecccCCCcCCc
Confidence 47889999999999999999999999998765432 34578999999999999988875 44577999999999999986
Q ss_pred cccCCCCCCC--CCCCCCCccccc-cceEEEECCCCCc------CCCCceeeEEEeCCccccccccCcchhhhcccCCce
Q 014065 319 LMSSNPLPED--GPHKPGSVGRPV-GQEIAILDEIGVP------QEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWF 389 (431)
Q Consensus 319 ~~~~~~~~~~--~~~~~~~~G~~~-~~~~~i~d~~~~~------~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~ 389 (431)
.....+.... ....++++|+|+ |++++|+|+++.. ++.++.|||+++|++++.||+++++.+.+.|.+|||
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~ 404 (540)
T PRK05857 325 TALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWV 404 (540)
T ss_pred eeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCce
Confidence 5443322111 123467899999 8999999987652 245789999999999999999999999999999999
Q ss_pred ecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 390 HTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 390 ~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|||+|++|++|++++.||.+|+||++|.+|+|.|||.+.
T Consensus 405 ~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l 444 (540)
T PRK05857 405 NTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIA 444 (540)
T ss_pred eccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHH
Confidence 9999999999999999999999999999999999999863
No 41
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.9e-60 Score=464.36 Aligned_cols=422 Identities=31% Similarity=0.449 Sum_probs=359.9
Q ss_pred CCcccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 1 MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 1 m~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
|.++++.++|.+.++.+|+++|+.+.+ +.+||+||+++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 3 ~~~~~l~~~l~~~~~~~p~~~a~~~~~-~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~ 81 (521)
T PRK06187 3 DYPLTIGRILRHGARKHPDKEAVYFDG-RRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGA 81 (521)
T ss_pred cccCCHHHHHHHHHHHCCCceEEEeCC-ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 578899999999999999999999766 5799999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccch------hhhhhhccccccccccc
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADS------ELTLSLAHSESDTNAIS 154 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 154 (431)
+++|+++.++.+++..+++.++++.++++.+..+.+.............+...+... ...+..... .......
T Consensus 82 ~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 160 (521)
T PRK06187 82 VLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLA-AASDTFD 160 (521)
T ss_pred EEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhh-cCCccCC
Confidence 999999999999999999999999999998877666655544332222222211110 000111000 1111112
Q ss_pred cCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC
Q 014065 155 KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234 (431)
Q Consensus 155 ~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 234 (431)
......+++++++|||||||.||++.++|.++..........+++.++++++..+|++|.+++.. .+.++..|++++++
T Consensus 161 ~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~l~~G~~~v~~ 239 (521)
T PRK06187 161 FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGL-PYLALMAGAKQVIP 239 (521)
T ss_pred CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHH-HHHHHHhCCEEEec
Confidence 23455688999999999999999999999999988888888889999999999999999998877 44499999999998
Q ss_pred CCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcc
Q 014065 235 AAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMT 314 (431)
Q Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~t 314 (431)
+ .+++..+++.++++++|.++++|++++.+.+..... ..+++++|.+++||++++++..+++.+.+++++++.||+|
T Consensus 240 ~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~-~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~t 316 (521)
T PRK06187 240 R--RFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAY-FVDFSSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMT 316 (521)
T ss_pred C--CCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCC-ccCcchhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccC
Confidence 7 459999999999999999999999999998877653 3457899999999999999999999999999999999999
Q ss_pred cccCcccCCCCCCCC---CCCCCCccccc-cceEEEECCCCCcCCC--CceeeEEEeCCccccccccCcchhhhcccCCc
Q 014065 315 EATHLMSSNPLPEDG---PHKPGSVGRPV-GQEIAILDEIGVPQEG--GAKGEVCIRGPNVTKGYKNNPEANKSAFLFGW 388 (431)
Q Consensus 315 E~~~~~~~~~~~~~~---~~~~~~~G~~~-~~~~~i~d~~~~~~~~--~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~ 388 (431)
|++++.......... .....++|+|+ +..++|+|+++.+++. |+.|||+++++.+..||+++++.+.+.|.+||
T Consensus 317 E~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~ 396 (521)
T PRK06187 317 ETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGW 396 (521)
T ss_pred ccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCc
Confidence 998776665432211 13667899999 7999999999999988 99999999999999999999999988899999
Q ss_pred eecCceEEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 389 FHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 389 ~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
|+|||+++++++|.+++.||.+|+||.+|.+++|.+||.+
T Consensus 397 ~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~ 436 (521)
T PRK06187 397 LHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDA 436 (521)
T ss_pred eeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHH
Confidence 9999999999999999999999999999999999999974
No 42
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.3e-60 Score=459.21 Aligned_cols=399 Identities=31% Similarity=0.426 Sum_probs=342.1
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
+|+.+.|+++|+++|+++|+.+.+ +.+||+||+++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v 80 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEE-KKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAV 80 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCC-eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEE
Confidence 589999999999999999998765 7999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCe
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDV 163 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (431)
|+++..+.+++..+++.++++.++++............ ..+. . +... .............+++
T Consensus 81 ~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~--------~~~~----~--~~~~---~~~~~~~~~~~~~~~~ 143 (483)
T PRK03640 81 LLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS--------VKFA----E--LMNG---PKEEAEIQEEFDLDEV 143 (483)
T ss_pred ecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc--------ccHH----H--Hhhc---ccccCCCCCCCCCCCe
Confidence 99999999999999999999999998765433221110 0000 0 0000 0011112223456899
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhh
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAST 243 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 243 (431)
++++|||||||.||+|.++|.++...+......+++.++++++..+|++|.+++.. ++.++..|+++++.+ .+++..
T Consensus 144 a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~l~~G~~~~~~~--~~~~~~ 220 (483)
T PRK03640 144 ATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSI-LMRSVIYGMRVVLVE--KFDAEK 220 (483)
T ss_pred EEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHH-HHHHHhcCCEEEecC--CCCHHH
Confidence 99999999999999999999999888777777788999999999999999999876 788899999999987 678999
Q ss_pred HHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCC
Q 014065 244 FWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSN 323 (431)
Q Consensus 244 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~ 323 (431)
+++.++++++|++.++|+++..+.+..... ....++|.+++||+++++...+.+.+ +++++++.||+||++..+...
T Consensus 221 ~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~--~~~~~lr~~~~~g~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~ 297 (483)
T PRK03640 221 INKLLQTGGVTIISVVSTMLQRLLERLGEG--TYPSSFRCMLLGGGPAPKPLLEQCKE-KGIPVYQSYGMTETASQIVTL 297 (483)
T ss_pred HHHHHHHhCCcEEEeHHHHHHHHHhCcCcc--ccCCcceEEEEcCCCCCHHHHHHHHH-hCCCeeeeeccCccccccccc
Confidence 999999999999999999999998765432 22468999999999999999998876 499999999999987654433
Q ss_pred CCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCe
Q 014065 324 PLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGY 402 (431)
Q Consensus 324 ~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~ 402 (431)
. .......++++|+|+ ++++++.|+ +.+++.|+.|||+++|++++.||+++++.+...|.+|||+|||++++++||+
T Consensus 298 ~-~~~~~~~~~~vG~p~~~~~~~i~~~-~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~~g~ 375 (483)
T PRK03640 298 S-PEDALTKLGSAGKPLFPCELKIEKD-GVVVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLDEEGF 375 (483)
T ss_pred C-cccccccCCCcccccCCcEEEEecC-CCcCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEcCCCC
Confidence 2 222345678999999 899999986 4789999999999999999999999999998888899999999999999999
Q ss_pred EEEecccccceecCCeeccccceecc
Q 014065 403 LHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 403 l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
+++.||++|++|.+|.+|+|.+||.+
T Consensus 376 l~~~GR~~~~i~~~G~~v~~~~ie~~ 401 (483)
T PRK03640 376 LYVLDRRSDLIISGGENIYPAEIEEV 401 (483)
T ss_pred EEEeecccCeEEeCCEEECHHHHHHH
Confidence 99999999999999999999999985
No 43
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=5.1e-60 Score=461.90 Aligned_cols=419 Identities=23% Similarity=0.339 Sum_probs=345.3
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..|+.++++++++.+|+++|+++.+ +++||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 22 ~~~l~~~~~~~a~~~p~~~a~~~~~-~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 100 (527)
T TIGR02275 22 DKPLTDILRDQAARYPDAIAIICGN-RQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAP 100 (527)
T ss_pred CCcHHHHHHHHHHHCCCceEEEeCC-ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEE
Confidence 4579999999999999999998654 799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchh-----HHHHHHHhcCcccccccccccc-hhhhhhhccccccccccccC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNA-----AAQAAASKLNISHATATLLDAD-SELTLSLAHSESDTNAISKL 156 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 156 (431)
+++++..+.+++.++++.++++.++++..... ...................... .......... . .......
T Consensus 101 v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 178 (527)
T TIGR02275 101 VLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLWLES-P-AEPVKFP 178 (527)
T ss_pred eccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHHhhC-c-CccccCC
Confidence 99999999999999999999999999876321 1111111111111111111000 0000000000 0 0011122
Q ss_pred CCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHH-HHHHHHhcCCEEEeCC
Q 014065 157 TNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLA-GLLSSFAAGAAVTLPA 235 (431)
Q Consensus 157 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~l~~G~~~~~~~ 235 (431)
...++++++++|||||||.||+|.++|.++..++........+..+++++..+|++|.+++.. .++.++..|+++++.+
T Consensus 179 ~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~ 258 (527)
T TIGR02275 179 PTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAP 258 (527)
T ss_pred CCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECC
Confidence 446789999999999999999999999999988888888888999999999999999998875 4788899999999976
Q ss_pred CCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCccc
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTE 315 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE 315 (431)
.+++..+++.++++++|++.++|.+++.+++..... ..+++++|.+++||+++++++.+++.+.++.++++.||+||
T Consensus 259 --~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~tE 335 (527)
T TIGR02275 259 --DPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKS-RYDLSSLKLLQVGGAKFSEAAARRVPAVFGCQLQQVFGMAE 335 (527)
T ss_pred --CCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCcccc-CCCccceEEEEEcCCCCCHHHHHHHHHHhCCeEEeeeccCc
Confidence 678999999999999999999999999988776543 34578999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCCCCCCccccc--cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cCCceecC
Q 014065 316 ATHLMSSNPLPEDGPHKPGSVGRPV--GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFHTG 392 (431)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TG 392 (431)
++...... ........+++|+|+ +.+++++|++|++++.|+.|||+++|+.++.||+++++.+...+ .+|||+||
T Consensus 336 ~~~~~~~~--~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TG 413 (527)
T TIGR02275 336 GLVNYTRL--DDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTG 413 (527)
T ss_pred cCccccCC--CCccccccccCCCCCCCCceEEEECCCCCCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcC
Confidence 65433221 111223456899998 48899999999999999999999999999999999999888877 46999999
Q ss_pred ceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 393 DIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 393 D~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+|+++++|++++.||.+|+|+++|++|+|.|||.+.
T Consensus 414 Dl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l 450 (527)
T TIGR02275 414 DLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLL 450 (527)
T ss_pred ceEEEcCCccEEEEecccceeecCCEEECHHHHHHHH
Confidence 9999999999999999999999999999999999863
No 44
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.7e-60 Score=466.85 Aligned_cols=420 Identities=29% Similarity=0.447 Sum_probs=347.4
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
.+|+.+++++.++++|+++|+.+.+ +.+||.||+++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 31 ~~~l~~~~~~~~~~~p~~~a~~~~~-~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 109 (573)
T PRK05605 31 DTTLVDLYDNAVARFGDRPALDFFG-ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVV 109 (573)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEeCC-CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 3589999999999999999999865 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccccc---c-----------------------
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA---D----------------------- 136 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------------------- 136 (431)
+|++|.++.+++.++++.++++++|+++................... ..... .
T Consensus 110 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
T PRK05605 110 VEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIV-SVNMIAAMPLLQRLALRLPIPALRKARAALTG 188 (573)
T ss_pred eecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeE-eeeccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999887655544433222111110 00000 0
Q ss_pred ---hhhhhhhcccccc-c--cccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhc-C-CCCCeEEEe
Q 014065 137 ---SELTLSLAHSESD-T--NAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYK-L-TESDSTVIV 208 (431)
Q Consensus 137 ---~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~-~-~~~~~~~~~ 208 (431)
....+........ . ..........+++++++|||||||.||+|.++|.++...+......+. + ..++++++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 268 (573)
T PRK05605 189 PAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVLAA 268 (573)
T ss_pred CCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEEEe
Confidence 0000000000000 0 001122345789999999999999999999999999877664433322 2 347899999
Q ss_pred cChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEecc
Q 014065 209 LPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCS 288 (431)
Q Consensus 209 ~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g 288 (431)
+|++|.+++...+..++..|+++++.+ .+++..+++.++++++|.+.++|++++.+.+..... ...++++|.+++||
T Consensus 269 ~p~~~~~g~~~~~~~~l~~g~~~~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~i~~gg 345 (573)
T PRK05605 269 LPMFHAYGLTLCLTLAVSIGGELVLLP--APDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEER-GVDLSGVRNAFSGA 345 (573)
T ss_pred cChHHHHHHHHHHHHHHHcCCEEEEeC--CCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCcccc-CCCchhccEEEECC
Confidence 999999998887888899999999877 678999999999999999999999999998765543 33478999999999
Q ss_pred CCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCC--CCcCCCCceeeEEEe
Q 014065 289 ASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEI--GVPQEGGAKGEVCIR 365 (431)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~--~~~~~~~~~Gel~v~ 365 (431)
++++++..+.+.+.++.++++.||+||+++++..+... ....++++|+|+ +..++|+|++ +.+++.|+.|||+++
T Consensus 346 ~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~--~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~ 423 (573)
T PRK05605 346 MALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMS--DDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVR 423 (573)
T ss_pred CcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCcc--cCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEe
Confidence 99999999999988899999999999999877665432 234567899999 7999999966 588999999999999
Q ss_pred CCccccccccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 366 GPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 366 ~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+.++.||+++++.+...|.+|||+|||++++|++|++++.||.+|++|.+|++|+|.+||.+.
T Consensus 424 ~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l 487 (573)
T PRK05605 424 GPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVL 487 (573)
T ss_pred cCchhhhhcCChhHhhhcccCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHH
Confidence 9999999999999998889889999999999999999999999999999999999999999863
No 45
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-61 Score=476.93 Aligned_cols=415 Identities=24% Similarity=0.351 Sum_probs=331.6
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHH
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFL 73 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~l 73 (431)
.+.|+.++|+++++.+|+++|+++.+ .+.+||+||+++++++|++|.+. +++||+|+++++|++++++++|
T Consensus 19 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~l 97 (631)
T PRK07769 19 PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFF 97 (631)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHH
Confidence 34689999999999999999998632 25799999999999999999987 8999999999999999999999
Q ss_pred HHHHhCcEEEec-CCCCC--HHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcc--cccccccccchhhhhhhccccc
Q 014065 74 AVIRARATAAPL-NAAYT--PDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNIS--HATATLLDADSELTLSLAHSES 148 (431)
Q Consensus 74 A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 148 (431)
||+++|++++|+ ++..+ .+++.++++.++++++|++.+..+............ ...+.. +.. ... .
T Consensus 98 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~---~ 168 (631)
T PRK07769 98 GALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAV-DAV-----PDE---V 168 (631)
T ss_pred HHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEc-ccc-----ccc---c
Confidence 999999999999 45554 678999999999999999887655444332221100 011101 000 000 0
Q ss_pred cccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcC
Q 014065 149 DTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAG 228 (431)
Q Consensus 149 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G 228 (431)
..........++++++++|||||||.||+|.++|.++...+......+++.++++++..+|++|.+|+.. .+.++..|
T Consensus 169 -~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~-~~~~~~~G 246 (631)
T PRK07769 169 -GATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLIT-VLLPALLG 246 (631)
T ss_pred -ccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhHH-HHHHHhhC
Confidence 0001112345789999999999999999999999999988888788888999999999999999999987 56667778
Q ss_pred CEEEeCCCCCC--ChhhHHHHHHHhcc---eeeecchHHHHHHHhcc--cC--CCCCCCCCccEEEeccCCCcHHHHHHH
Q 014065 229 AAVTLPAAGRF--SASTFWQDMIKYNA---TWYTAVPTIHQIVLDRH--VA--KPEPVYPKLRFIRSCSASLAPVILSRL 299 (431)
Q Consensus 229 ~~~~~~~~~~~--~~~~~~~~i~~~~~---t~~~~~p~~~~~l~~~~--~~--~~~~~~~~l~~i~~~g~~~~~~~~~~~ 299 (431)
+++++.++..+ ++..+++.+.++++ +.+..+|+++..++... .. ....+++++|.+++||++++++..+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~ 326 (631)
T PRK07769 247 HYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKF 326 (631)
T ss_pred CeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHHHHHHH
Confidence 88887653233 88899999999886 78999999887765431 11 113457899999999999999999999
Q ss_pred HHHh---CC---ceecccCcccccCcccCCCCCCCC------------------------CCCCCCccccc-cceEEEEC
Q 014065 300 EEAF---GA---PVLEAYAMTEATHLMSSNPLPEDG------------------------PHKPGSVGRPV-GQEIAILD 348 (431)
Q Consensus 300 ~~~~---~~---~i~~~yg~tE~~~~~~~~~~~~~~------------------------~~~~~~~G~~~-~~~~~i~d 348 (431)
.+.| |+ .+++.||+||++.+++..+..... .....++|+|. +..++|+|
T Consensus 327 ~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd 406 (631)
T PRK07769 327 NEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVD 406 (631)
T ss_pred HHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEc
Confidence 9987 33 599999999998766554321100 01124789998 79999999
Q ss_pred -CCCCcCCCCceeeEEEeCCccccccccCcchhhhccc------------------CCceecCceEEEcCCCeEEEeccc
Q 014065 349 -EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL------------------FGWFHTGDIGYFDSDGYLHLVGRI 409 (431)
Q Consensus 349 -~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------------~g~~~TGD~~~~~~~g~l~~~gR~ 409 (431)
++|++++.|+.|||+++||+++.||+++++.+++.|. +|||+|||+|+++ ||+|+|+||.
T Consensus 407 ~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~ 485 (631)
T PRK07769 407 PETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRV 485 (631)
T ss_pred CCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEccc
Confidence 5699999999999999999999999999999888774 3899999999995 9999999999
Q ss_pred ccceecCCeeccccceeccc
Q 014065 410 KELINRGGNLHESISLFLAK 429 (431)
Q Consensus 410 ~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+||++|++|+|.|||.+.
T Consensus 486 ~d~Ik~~G~~V~p~eIE~~l 505 (631)
T PRK07769 486 KDLVIIDGRNHYPQDLEYTA 505 (631)
T ss_pred ccEEEECCeeeCHHHHHHHH
Confidence 99999999999999999753
No 46
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-60 Score=460.34 Aligned_cols=401 Identities=21% Similarity=0.264 Sum_probs=339.9
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
|++.+.|.++|+++|+++|+++.+ .++||.||.++++++|++|.+.|. +||+|+++++|+++++++++||+++|++++
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~-~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v 78 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEND-RVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCV 78 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCC-cEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEE
Confidence 578999999999999999998755 699999999999999999999984 899999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCe
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDV 163 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (431)
|+++.++.+++.++++.++++.++++......+... . ...+..... ...... . ...........+++
T Consensus 79 ~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~----~--~~~~~~~~~--~~~~~~----~-~~~~~~~~~~~~~~ 145 (487)
T PRK07638 79 PLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE----E--GRVIEIDEW--KRMIEK----Y-LPTYAPIENVQNAP 145 (487)
T ss_pred ecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc----c--ceEEEehhh--hhhhhh----c-cccccccccCCCCc
Confidence 999999999999999999999999998654333210 0 001111000 000000 0 01111122335678
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhh
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAST 243 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 243 (431)
++++|||||||.||+|.++|.+++.++......+++.++|+++...|++|..++.. ++.++..|+++++.+ .+++..
T Consensus 146 a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~-~~~~l~~g~~~~~~~--~~~~~~ 222 (487)
T PRK07638 146 FYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYG-AISTLYVGQTVHLMR--KFIPNQ 222 (487)
T ss_pred EEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHH-HHHHHccCcEEEEcC--CCCHHH
Confidence 99999999999999999999999988888888888999999999999999887654 888999999999987 689999
Q ss_pred HHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCcccC
Q 014065 244 FWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLMSS 322 (431)
Q Consensus 244 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~~ 322 (431)
+++.++++++|++.++|++++.+.+... . ..+.+.++++|++++++..+++.+.+ ++++++.||+||++.++..
T Consensus 223 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 297 (487)
T PRK07638 223 VLDKLETENISVMYTVPTMLESLYKENR----V-IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTAL 297 (487)
T ss_pred HHHHHHHcCCeEEEeCcHHHHHHHhCcC----c-CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEe
Confidence 9999999999999999999999987622 1 34566678899999999999999998 7899999999999977655
Q ss_pred CCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCC
Q 014065 323 NPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDG 401 (431)
Q Consensus 323 ~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g 401 (431)
.. ........++|+|+ +.+++|+|++|.+++.|+.|||+++|+.++.||+++++.+.+.+.+|||+|||++++|++|
T Consensus 298 ~~--~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~~g 375 (487)
T PRK07638 298 VD--EESERRPNSVGRPFHNVQVRICNEAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYEDEEG 375 (487)
T ss_pred cc--cccCCCCCCCCcccCCcEEEEECCCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEcCCC
Confidence 43 22345677999999 8999999999999999999999999999999999999888777788999999999999999
Q ss_pred eEEEecccccceecCCeeccccceeccc
Q 014065 402 YLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 402 ~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
++++.||.+|+||++|.+|+|.|||.+.
T Consensus 376 ~l~i~GR~~d~i~~~G~~v~~~eiE~~l 403 (487)
T PRK07638 376 FIYIVGREKNMILFGGINIFPEEIESVL 403 (487)
T ss_pred eEEEEecCCCeEEeCCEEECHHHHHHHH
Confidence 9999999999999999999999999863
No 47
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=7.6e-60 Score=459.08 Aligned_cols=415 Identities=30% Similarity=0.440 Sum_probs=351.3
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
+.+|.+.+.+++ .+|++.|+...+++.+||.||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~ 80 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVF 80 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 678999999999 9999999988677899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|+++..+.+++..+++.++++++++++...+............. ...+... ....+..... .............++
T Consensus 81 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~ 157 (504)
T PRK07514 81 LPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPH-VETLDAD-GTGSLLEAAA-AAPDDFETVPRGADD 157 (504)
T ss_pred EECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCce-EEEecCC-CcccHHHhhh-hcCcccCcccCCCCC
Confidence 999999999999999999999999999887665554433322211 1111110 0000100000 011111223456789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAS 242 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 242 (431)
+++++|||||||.||+|.++|.++...+......+++.+++++++.+|++|..++...++.++..|+++++.+ ..++.
T Consensus 158 ~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~ 235 (504)
T PRK07514 158 LAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLP--KFDPD 235 (504)
T ss_pred eEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECC--CCCHH
Confidence 9999999999999999999999999988888888889999999999999999999888889999999999987 67899
Q ss_pred hHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccC
Q 014065 243 TFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSS 322 (431)
Q Consensus 243 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~ 322 (431)
.+++.+ .++|++..+|.++..+++..... ...++++|.+++||+++++++.+.+.+.++.++++.||+||++.....
T Consensus 236 ~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 312 (504)
T PRK07514 236 AVLALM--PRATVMMGVPTFYTRLLQEPRLT-REAAAHMRLFISGSAPLLAETHREFQERTGHAILERYGMTETNMNTSN 312 (504)
T ss_pred HHHHHH--HhheeeecHHHHHHHHHcCCCCC-cccccceeeEEecCCCCCHHHHHHHHHHhCCcceeecccccccccccC
Confidence 999999 47999999999999988765432 334789999999999999999999999999999999999999865543
Q ss_pred CCCCCCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhccc-CCceecCceEEEcC
Q 014065 323 NPLPEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL-FGWFHTGDIGYFDS 399 (431)
Q Consensus 323 ~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~ 399 (431)
.. .......++|.|+ +++++|+| +++++++.|+.|||+++|+.++.||+++++.+++.|. ++||+|||++++++
T Consensus 313 ~~---~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~ 389 (504)
T PRK07514 313 PY---DGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDE 389 (504)
T ss_pred Cc---cccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcC
Confidence 22 2233457899999 89999999 7899999999999999999999999999998888885 79999999999999
Q ss_pred CCeEEEecccccceecCCeeccccceeccc
Q 014065 400 DGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 400 ~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|.+++.||.+|+||++|.+|+|.+||.+.
T Consensus 390 ~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l 419 (504)
T PRK07514 390 RGYVHIVGRGKDLIISGGYNVYPKEVEGEI 419 (504)
T ss_pred CccEEEeccccceEEeCCeEECHHHHHHHH
Confidence 999999999999999999999999999863
No 48
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=9.6e-60 Score=461.15 Aligned_cols=420 Identities=25% Similarity=0.400 Sum_probs=345.8
Q ss_pred ccHHHHHHHHHHhcCCcceEEec-----CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHh
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVS-----GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRA 78 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~-----~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 78 (431)
.|+.+.+++.++.+|+++|++.. +++.+||+||+++++++|++|++.|+++||+|+++++|+++++++++||+++
T Consensus 22 ~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 101 (538)
T TIGR03208 22 RTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARI 101 (538)
T ss_pred CcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 57899999999999999999852 2368999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchh-----HHHHHHHhcCcccccccccccchhhhhhhcc--c-cccc
Q 014065 79 RATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA-----AAQAAASKLNISHATATLLDADSELTLSLAH--S-ESDT 150 (431)
Q Consensus 79 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~ 150 (431)
|++++|++|..+.+++.++++.++++++++++.... ...............+.. +......+.... . ....
T Consensus 102 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 180 (538)
T TIGR03208 102 GAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVI-DGDGDDSFDRVLMTPERDDT 180 (538)
T ss_pred CEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEe-cCCCCcCHHHHhhccccccc
Confidence 999999999999999999999999999999876431 111111111111111111 111000010000 0 0000
Q ss_pred cc----cccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHh
Q 014065 151 NA----ISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFA 226 (431)
Q Consensus 151 ~~----~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 226 (431)
.. .......++++++++|||||||.||+|.++|.++...+......+++..++++++.+|++|..++...++.++.
T Consensus 181 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~ 260 (538)
T TIGR03208 181 PDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTGFMYGLMMPLI 260 (538)
T ss_pred cccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHHHHHHHHHHHH
Confidence 00 11123467899999999999999999999999999988888888889999999999999999998888999999
Q ss_pred cCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCc
Q 014065 227 AGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAP 306 (431)
Q Consensus 227 ~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~ 306 (431)
.|+++++.+ .+++..+++.+++++++++..+|.++..+..+.... ...++++|.+++||+++++++.+++.+.++++
T Consensus 261 ~g~~~~~~~--~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~-~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~ 337 (538)
T TIGR03208 261 LNATAVLQD--IWNPARAAELIRETGVTFTMASTPFLTDLCRAVKES-GAPVPSLFTFLCAGAPIPGILVERAWELLGAL 337 (538)
T ss_pred cCCEEEecC--ccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhcc-CCCCCcceEEEEcCCCCCHHHHHHHHHHcCCe
Confidence 999999976 779999999999999999999999999987765432 34578999999999999999999999989999
Q ss_pred eecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc
Q 014065 307 VLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL 385 (431)
Q Consensus 307 i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 385 (431)
+++.||+||++.+....... .......++|+|+ +++++++|+++++++.|+.|||+++|+.++.||+++++.+.. ..
T Consensus 338 ~~~~YG~tE~~~~~~~~~~~-~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~-~~ 415 (538)
T TIGR03208 338 IVSAWGMTENGAVTVTEPDD-ALEKASTTDGRPLPGVEVKVIDANGAKLSQGETGRLLVRGCSNFGGYLKRPHLNST-DA 415 (538)
T ss_pred EEeeeccCcCCCccccCccc-chhhccCcccccCCCCEEEEECCCCCCCcCCCCcEEEEecCcccccccCCcccccc-cC
Confidence 99999999998776554321 1122345789999 899999999999999999999999999999999998877643 35
Q ss_pred CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 386 FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 386 ~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|||+|||+|++|++|++++.||.+|+|+++|++|+|.|||.+.
T Consensus 416 ~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l 459 (538)
T TIGR03208 416 EGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLL 459 (538)
T ss_pred CCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHH
Confidence 78999999999999999999999999999999999999999864
No 49
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.7e-60 Score=461.35 Aligned_cols=420 Identities=27% Similarity=0.368 Sum_probs=356.3
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..|+.++|...++.+|+++|+.+.+ +.+||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~~~-~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~ 88 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVFGD-RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVH 88 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEECC-ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 4579999999999999999998765 799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccc-----cchhhhhhhccccccccccccCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLD-----ADSELTLSLAHSESDTNAISKLT 157 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 157 (431)
+|+++..+.+++.++++.+++++++++.+....+....+............. ......+..... ..........
T Consensus 89 v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 167 (523)
T PRK08316 89 VPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADWAE-AGSVAEPDVE 167 (523)
T ss_pred EecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHHHh-cCCCccCccC
Confidence 9999999999999999999999999998876665544332221111100000 000011110000 0011112334
Q ss_pred CCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC
Q 014065 158 NDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG 237 (431)
Q Consensus 158 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~ 237 (431)
...+++++++|||||||.||+|.++|.+++.........+++.++++++..+|++|..++...++.++..|+++++.+
T Consensus 168 ~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-- 245 (523)
T PRK08316 168 LADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-- 245 (523)
T ss_pred CCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec--
Confidence 567899999999999999999999999999888887888899999999999999999998776778899999999987
Q ss_pred CCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccc
Q 014065 238 RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEA 316 (431)
Q Consensus 238 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~ 316 (431)
..++..+++.++++++|++.++|.++..+.+..... ..+++++|.+++||+.++.+..+.+++.+ ++++++.||+||+
T Consensus 246 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~ 324 (523)
T PRK08316 246 APDPELILRTIEAERITSFFAPPTVWISLLRHPDFD-TRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEI 324 (523)
T ss_pred CCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccc-cCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeeccccc
Confidence 568999999999999999999999999998775443 34578999999999999999999999988 7899999999999
Q ss_pred cCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceE
Q 014065 317 THLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIG 395 (431)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~ 395 (431)
+.+...... .+.....+++|+|+ +++++|+|++|++++.|+.|||+++|+.++.||+++++.+.+.|.++||+|||+|
T Consensus 325 ~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~ 403 (523)
T PRK08316 325 APLATVLGP-EEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLG 403 (523)
T ss_pred CccccccCc-cccccccCCcccCCCCcEEEEEcCCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceE
Confidence 987666542 22345568899999 8999999999999999999999999999999999999999888999999999999
Q ss_pred EEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 396 YFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 396 ~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
++++||.+++.||.+|+||++|++|+|.+||.+
T Consensus 404 ~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~ 436 (523)
T PRK08316 404 VMDEEGYITVVDRKKDMIKTGGENVASREVEEA 436 (523)
T ss_pred EEcCCceEEEecccccEEEeCCeEECHHHHHHH
Confidence 999999999999999999999999999999974
No 50
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=9.2e-60 Score=462.42 Aligned_cols=421 Identities=26% Similarity=0.364 Sum_probs=347.0
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..|+.++|+++++.+|+++|+++.+++++||+||+++++++|++|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 22 ~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 101 (547)
T PRK06087 22 DASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVS 101 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 35799999999999999999987665799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCch-----hHHHHHHHhcCcccccccccccc---hhhhhhhccccccccccc
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGN-----AAAQAAASKLNISHATATLLDAD---SELTLSLAHSESDTNAIS 154 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 154 (431)
+|++|.++.+++.++++.+++++++++.... +.+.............+...... ....+........ ....
T Consensus 102 v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 180 (547)
T PRK06087 102 VPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYE-PLTT 180 (547)
T ss_pred eccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCC-cccC
Confidence 9999999999999999999999999986432 22222222221111111111100 0001110000000 0011
Q ss_pred cCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC
Q 014065 155 KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234 (431)
Q Consensus 155 ~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 234 (431)
......+++++++|||||||.||+|.++|.+++.....+...+++.+++++++.+|++|.++++..++.++..|+++++.
T Consensus 181 ~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~ 260 (547)
T PRK06087 181 AITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLL 260 (547)
T ss_pred CCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEec
Confidence 22346789999999999999999999999999988888788888999999999999999999988899999999999998
Q ss_pred CCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcc
Q 014065 235 AAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMT 314 (431)
Q Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~t 314 (431)
+ .+++..+++.+++++++++..+|..+..+++..... ..+++++|.+++||+++++++.+.+.+. ++++++.||+|
T Consensus 261 ~--~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~-~~~~~~lr~i~~gG~~~~~~~~~~~~~~-~~~l~~~YG~T 336 (547)
T PRK06087 261 D--IFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQ-PADLSALRFFLCGGTTIPKKVARECQQR-GIKLLSVYGST 336 (547)
T ss_pred C--CCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccC-CCCCCCeEEEEEcCCCCCHHHHHHHHHc-CCcEEEEeccc
Confidence 7 679999999999999999998888777777665432 3457899999999999999999988764 99999999999
Q ss_pred cccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cCCceecC
Q 014065 315 EATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFHTG 392 (431)
Q Consensus 315 E~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TG 392 (431)
|++++...... ........++|+|+ ++.++++|+++.+++.|+.|||+++|+.++.||+++++.+...+ .+|||+||
T Consensus 337 E~~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TG 415 (547)
T PRK06087 337 ESSPHAVVNLD-DPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSG 415 (547)
T ss_pred ccCCccccCCC-cchhhcCCcCCccCCCceEEEEcCCCCCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcC
Confidence 99877665432 11123456789999 89999999999999999999999999999999999998887777 46999999
Q ss_pred ceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 393 DIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 393 D~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|++++|++|++++.||.+|+|+.+|++|+|.+||.+.
T Consensus 416 Dl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l 452 (547)
T PRK06087 416 DLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDIL 452 (547)
T ss_pred ceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHH
Confidence 9999999999999999999999999999999999863
No 51
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=6.6e-60 Score=467.80 Aligned_cols=411 Identities=23% Similarity=0.292 Sum_probs=324.2
Q ss_pred ccHHHHHHHHHHhcCCcceEEecC----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhC
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSG----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRAR 79 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 79 (431)
.|+.+.|+++++++|+++|+++.+ .+++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 39 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G 118 (614)
T PRK08180 39 RRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAG 118 (614)
T ss_pred ccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcC
Confidence 578999999999999999998642 2689999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCC-----HHHHHHHHhcCCceEEEecCCc--hhHHHHHHHhcCcccccccccccc-h--hhhhhhcccccc
Q 014065 80 ATAAPLNAAYT-----PDEFEFYLSDSESKLLLTPAEG--NAAAQAAASKLNISHATATLLDAD-S--ELTLSLAHSESD 149 (431)
Q Consensus 80 ~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~ 149 (431)
++++|++|.++ .+++.++++.++++++|+++.. ...+... .......+...... . ...+........
T Consensus 119 av~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 195 (614)
T PRK08180 119 VPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAV---VPADVEVVAVRGAVPGRAATPFAALLATPP 195 (614)
T ss_pred CeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhh---ccCCceEEEecCCCCCcccccHHHHhcccc
Confidence 99999999998 7899999999999999997542 1111111 01011111111000 0 011111100000
Q ss_pred c--cccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCC--CCCeEEEecChhhHHHHHHHHHHHH
Q 014065 150 T--NAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLT--ESDSTVIVLPLFHVHGMLAGLLSSF 225 (431)
Q Consensus 150 ~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~l 225 (431)
. .........++++++++|||||||.||+|.+||.++..++......++.. .++++++.+|++|.+++...++.++
T Consensus 196 ~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l 275 (614)
T PRK08180 196 TAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLGIVL 275 (614)
T ss_pred ccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHHHHHH
Confidence 0 00111234578999999999999999999999999998887776666653 5689999999999999887788999
Q ss_pred hcCCEEEeCCCCCCC---hhhHHHHHHHhcceeeecchHHHHHHHhcccCCC---CCCCCCccEEEeccCCCcHHHHHHH
Q 014065 226 AAGAAVTLPAAGRFS---ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP---EPVYPKLRFIRSCSASLAPVILSRL 299 (431)
Q Consensus 226 ~~G~~~~~~~~~~~~---~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~---~~~~~~l~~i~~~g~~~~~~~~~~~ 299 (431)
..|+++++.+. .++ ...+++.++++++|+++++|+++..+++...... ..+++++|.+++||+++++++.+.+
T Consensus 276 ~~G~~v~~~~~-~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~~~ 354 (614)
T PRK08180 276 YNGGTLYIDDG-KPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWDRL 354 (614)
T ss_pred hcCCEEEEeCC-CccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHHHH
Confidence 99999998652 233 3467889999999999999999999987543221 2346899999999999999999999
Q ss_pred HHH----hC--CceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccc
Q 014065 300 EEA----FG--APVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKG 372 (431)
Q Consensus 300 ~~~----~~--~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~g 372 (431)
.+. ++ +++++.||+||++++++.... ....++++|+|+ |++++++|++ ..|||+++|++++.|
T Consensus 355 ~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~---~~~~~~svG~p~pg~~v~i~d~~-------~~GEi~vrg~~v~~G 424 (614)
T PRK08180 355 DRVAEATCGERIRMMTGLGMTETAPSATFTTG---PLSRAGNIGLPAPGCEVKLVPVG-------GKLEVRVKGPNVTPG 424 (614)
T ss_pred HHHHHhhcCCCceeeeeecccccCCceEeccc---ccCCCCcccCccCCcEEEEecCC-------CCcEEEEecCccchh
Confidence 875 33 679999999999876655432 234678999999 8999999853 359999999999999
Q ss_pred cccCcchhhhccc-CCceecCceEEE----cCCCeEEEeccccccee-cCCeecc--ccceecc
Q 014065 373 YKNNPEANKSAFL-FGWFHTGDIGYF----DSDGYLHLVGRIKELIN-RGGNLHE--SISLFLA 428 (431)
Q Consensus 373 y~~~~~~~~~~~~-~g~~~TGD~~~~----~~~g~l~~~gR~~d~i~-~~G~~i~--~~~iE~a 428 (431)
|+++++.+++.|. +|||+|||+|++ |++|+++|.||.+|+|+ .+|++|+ |.|+|.+
T Consensus 425 Y~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~ 488 (614)
T PRK08180 425 YWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAV 488 (614)
T ss_pred hcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHH
Confidence 9999999988884 799999999999 56899999999999887 6899887 5666654
No 52
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-59 Score=455.60 Aligned_cols=412 Identities=27% Similarity=0.360 Sum_probs=347.8
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
+++.++++++++.+|+++|+.+.+ +.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~-~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v 80 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRD-QEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFL 80 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECC-cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEE
Confidence 578899999999999999998755 6999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCe
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDV 163 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (431)
|+++..+.+++.++++.++++.++++.+....... .......... .......... ............++++
T Consensus 81 ~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~ 151 (497)
T PRK06145 81 PINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-------ETPKIVIDAA-AQADSRRLAQ-GGLEIPPQAAVAPTDL 151 (497)
T ss_pred ecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-------ccceEEecCc-ccchhHHHhc-cCCCCCCCCCCCccce
Confidence 99999999999999999999999998765432110 0011111110 0000000000 0001111223467899
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhh
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAST 243 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 243 (431)
++++|||||||.||+|.++|.++...+......+++..+++++...|++|.+++....+.++..|+++++.+ .+++..
T Consensus 152 a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~--~~~~~~ 229 (497)
T PRK06145 152 VRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHR--EFDPEA 229 (497)
T ss_pred EEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECC--cCCHHH
Confidence 999999999999999999999998776666677789999999999999999998776788899999999977 679999
Q ss_pred HHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCcccC
Q 014065 244 FWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLMSS 322 (431)
Q Consensus 244 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~~ 322 (431)
+++.++++++|++.++|+++..++...... ..+++++|.+++||+++++++++.+.+.| +.++++.||+||++..++.
T Consensus 230 ~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~-~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~ 308 (497)
T PRK06145 230 VLAAIERHRLTCAWMAPVMLSRVLTVPDRD-RFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTL 308 (497)
T ss_pred HHHHHHHhCCeEEEehHHHHHHHHcCCCcc-ccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCccee
Confidence 999999999999999999999998765432 34468999999999999999999999988 6889999999999986654
Q ss_pred CCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCC
Q 014065 323 NPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDG 401 (431)
Q Consensus 323 ~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g 401 (431)
.... ......+++|+|+ +++++++|+++.+++.|+.|||+++|++++.||+++++.+++.|.++||+|||++++|++|
T Consensus 309 ~~~~-~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g 387 (497)
T PRK06145 309 MEAG-REIEKIGSTGRALAHVEIRIADGAGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLDEEG 387 (497)
T ss_pred ccCc-cccccCCCcccCCCCceEEEECCCCCCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEcCCC
Confidence 4321 1234567899999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecccccceecCCeeccccceeccc
Q 014065 402 YLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 402 ~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+++++||.+|+||.+|++++|.+||.+.
T Consensus 388 ~l~~~GR~~~~i~~~G~~v~~~~IE~~l 415 (497)
T PRK06145 388 FLYLTDRKKDMIISGGENIASSEVERVI 415 (497)
T ss_pred cEEEeccccceEEeCCeEECHHHHHHHH
Confidence 9999999999999999999999999863
No 53
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.8e-60 Score=461.25 Aligned_cols=421 Identities=28% Similarity=0.357 Sum_probs=350.5
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
.+|+.+.+...++.+|+++|+.+.+ +.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 16 ~~n~~~~~~~~a~~~~~~~a~~~~~-~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~ 94 (542)
T PRK07786 16 RQNWVNQLARHALMQPDAPALRFLG-NTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIA 94 (542)
T ss_pred ccCHHHHHHHHHHHCCCCeEEEeCC-CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 3689999999999999999998755 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc--hhhhhhhccccccccccccCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD--SELTLSLAHSESDTNAISKLTNDP 160 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 160 (431)
+|+++..+.+++.++++.+++++++++....+...............+...+.. ....+....... ...........
T Consensus 95 vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 173 (542)
T PRK07786 95 VPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEA-GPAHAPVDIPN 173 (542)
T ss_pred EEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhcc-CCCCCCCCCCC
Confidence 999999999999999999999999999876555443332211111111111100 001111100000 01111223456
Q ss_pred CCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcC-CCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCC
Q 014065 161 SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKL-TESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRF 239 (431)
Q Consensus 161 ~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~ 239 (431)
+++++++|||||||.||+|.++|.++...+......+++ ..++++++..|++|.+|+.. ++.++..|+++++.+...+
T Consensus 174 ~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~v~~~~~~~ 252 (542)
T PRK07786 174 DSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGS-MLPGLLLGAPTVIYPLGAF 252 (542)
T ss_pred CCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHH-HHHHHHccCEEEEccCCCc
Confidence 789999999999999999999999999888777777776 67889999999999999855 8899999999998764467
Q ss_pred ChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccC
Q 014065 240 SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATH 318 (431)
Q Consensus 240 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~ 318 (431)
++..+++.++++++|.++++|+++..++........ ..++|.+++||++++++.++.+.+.+ +.++++.||+||++.
T Consensus 253 ~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~--~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~ 330 (542)
T PRK07786 253 DPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPR--DLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSP 330 (542)
T ss_pred CHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCcc--CcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeeccccccc
Confidence 999999999999999999999999999876543221 23789999999999999999999998 789999999999987
Q ss_pred cccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEE
Q 014065 319 LMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYF 397 (431)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~ 397 (431)
+.+... .+......+++|+|+ ++.++|+|+++++++.|+.|||+++|+.++.||+++++.++..|.+|||+|||++++
T Consensus 331 ~~~~~~-~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~ 409 (542)
T PRK07786 331 VTCMLL-GEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQ 409 (542)
T ss_pred ceEecC-cccccccCCCccccCCCceEEEECCCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEE
Confidence 655433 222345567899999 799999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecccccceecCCeeccccceeccc
Q 014065 398 DSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 398 ~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+++|.+++.||.+|+||++|.+++|.|||.+.
T Consensus 410 ~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l 441 (542)
T PRK07786 410 DEEGYVWVVDRKKDMIISGGENIYCAEVENVL 441 (542)
T ss_pred cCCceEEEEecccceEEeCCEEECHHHHHHHH
Confidence 99999999999999999999999999999863
No 54
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.7e-59 Score=462.09 Aligned_cols=426 Identities=29% Similarity=0.392 Sum_probs=350.6
Q ss_pred CcccHHHHHHHHHHhcCCcceEEec-CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVS-GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
.+.|+.++|.+.++.+|+++|+++. +++++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 14 ~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~ 93 (559)
T PRK08315 14 LEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGA 93 (559)
T ss_pred hhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCe
Confidence 4568999999999999999999874 346899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchh-----HHHHHHHhcC-------------cccccccccccc--hhhh
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA-----AAQAAASKLN-------------ISHATATLLDAD--SELT 140 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~-------------~~~~~~~~~~~~--~~~~ 140 (431)
+++|++|..+.+++..+++.++++.++++..... ...+...... .....+...... ....
T Consensus 94 ~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (559)
T PRK08315 94 ILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKHPGMLN 173 (559)
T ss_pred EEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCCccccc
Confidence 9999999999999999999999999999876421 1111111110 000000000000 0000
Q ss_pred hhhccc-----cccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHH
Q 014065 141 LSLAHS-----ESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVH 215 (431)
Q Consensus 141 ~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 215 (431)
+..... ..............+++++++|||||||.||+|.++|.++..++......+++.++++++...|++|..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 253 (559)
T PRK08315 174 FDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDRLCIPVPLYHCF 253 (559)
T ss_pred HHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCceEEEecCcHHHH
Confidence 000000 000001112234568899999999999999999999999998888888888999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHH
Q 014065 216 GMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVI 295 (431)
Q Consensus 216 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~ 295 (431)
+++..++.++..|+++++... .+++..+++.++++++|++.++|+++..++...... ...++++|.++++|+++++++
T Consensus 254 g~~~~~~~~l~~g~~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~-~~~~~~lr~~~~~G~~~~~~~ 331 (559)
T PRK08315 254 GMVLGNLACVTHGATMVYPGE-GFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFA-RFDLSSLRTGIMAGSPCPIEV 331 (559)
T ss_pred HHHHHHHHHHhccceEEEecC-CCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccC-CCCchhhheeEecCCCCCHHH
Confidence 998889999999999986443 678999999999999999999999998887765432 335789999999999999999
Q ss_pred HHHHHHHhCC-ceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCC-CCcCCCCceeeEEEeCCccccc
Q 014065 296 LSRLEEAFGA-PVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEI-GVPQEGGAKGEVCIRGPNVTKG 372 (431)
Q Consensus 296 ~~~~~~~~~~-~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~-~~~~~~~~~Gel~v~~~~~~~g 372 (431)
.+.+.+.++. ++++.||+||++.+++.............++|+|+ +++++++|++ +++++.|+.|||+++|++++.|
T Consensus 332 ~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~g 411 (559)
T PRK08315 332 MKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSVMKG 411 (559)
T ss_pred HHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchhhhh
Confidence 9999998865 49999999999987665543333334568999999 8999999977 9999999999999999999999
Q ss_pred cccCcchhhhcc-cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 373 YKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 373 y~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+++++.++..+ .++||+|||++++++||.++++||.+|+||++|.+++|.|||.+.
T Consensus 412 y~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l 469 (559)
T PRK08315 412 YWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFL 469 (559)
T ss_pred hcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHH
Confidence 999998888777 678999999999999999999999999999999999999999863
No 55
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=2.7e-59 Score=456.39 Aligned_cols=421 Identities=28% Similarity=0.410 Sum_probs=344.6
Q ss_pred cccHHHHHHHHHHhcCCcceEEecC----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHh
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSG----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRA 78 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 78 (431)
..|+.++|++.|+++|+++|+++.+ .+++||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++
T Consensus 6 ~~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~ 85 (517)
T PRK08008 6 GQHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKI 85 (517)
T ss_pred cccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 4689999999999999999998754 368999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc-----hhhhhhhcccccccccc
Q 014065 79 RATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD-----SELTLSLAHSESDTNAI 153 (431)
Q Consensus 79 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 153 (431)
|+++++++|..+.+++.++++.++++.++++.+..+...+...........+...... ....+............
T Consensus 86 G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (517)
T PRK08008 86 GAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQPATLC 165 (517)
T ss_pred CeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCCcccc
Confidence 9999999999999999999999999999999887666655543322111111111100 00011110000000011
Q ss_pred ccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEe
Q 014065 154 SKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTL 233 (431)
Q Consensus 154 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 233 (431)
......++++++++|||||||.||+|.++|.++............+..++++++.+|++|..++...++.++..|+++++
T Consensus 166 ~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 245 (517)
T PRK08008 166 YAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVL 245 (517)
T ss_pred ccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEE
Confidence 12234568999999999999999999999999986554444445678899999999999998888878999999999999
Q ss_pred CCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCc
Q 014065 234 PAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAM 313 (431)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~ 313 (431)
.+ .+++..+++.++++++|++.++|++++.+........ ....+++.+.++ .+++++....+.+.+++++++.||+
T Consensus 246 ~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~YG~ 321 (517)
T PRK08008 246 LE--KYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSAN-DRQHCLREVMFY-LNLSDQEKDAFEERFGVRLLTSYGM 321 (517)
T ss_pred cc--ccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccc-cccccceeeEEe-cCCCHHHHHHHHHHhCCeEEeeccc
Confidence 87 6789999999999999999999999999876543322 224577877765 4789999999999999999999999
Q ss_pred ccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeC---CccccccccCcchhhhccc-CCc
Q 014065 314 TEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRG---PNVTKGYKNNPEANKSAFL-FGW 388 (431)
Q Consensus 314 tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~---~~~~~gy~~~~~~~~~~~~-~g~ 388 (431)
||++..+..... .......++|+|+ +++++++|+++++++.|+.|||+++| ++++.||+++++.+.+.+. +||
T Consensus 322 tE~~~~~~~~~~--~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~ 399 (517)
T PRK08008 322 TETIVGIIGDRP--GDKRRWPSIGRPGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGW 399 (517)
T ss_pred cccccccccCCc--cccccCCccccCCCCcEEEEECCCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCC
Confidence 999876654432 2234567899998 89999999999999999999999998 6899999999999888874 799
Q ss_pred eecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 389 FHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 389 ~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+|||+|++|++|++++.||.+|+||.+|++|+|.+||.+.
T Consensus 400 ~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l 440 (517)
T PRK08008 400 LHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENII 440 (517)
T ss_pred eeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHH
Confidence 99999999999999999999999999999999999999863
No 56
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=3.2e-60 Score=477.57 Aligned_cols=413 Identities=23% Similarity=0.328 Sum_probs=329.4
Q ss_pred cccHHHHHHHHHHhcCC-cceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 3 GVTLIGLLNQVIDQFSS-KRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~-~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
..|+.+.|++.++++|+ +.|+...+++++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++
T Consensus 203 ~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~v 281 (718)
T PRK08043 203 RETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRRI 281 (718)
T ss_pred CCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCCc
Confidence 46899999999999998 5777643347899999999999999999987 599999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHH--HHHHhcCcccccccccccchhhhhhh---ccccccccccccC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQ--AAASKLNISHATATLLDADSELTLSL---AHSESDTNAISKL 156 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 156 (431)
++|+++.++.+++.++++.++++++|++.+..+... ......... ..+...+......... .............
T Consensus 282 ~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (718)
T PRK08043 282 PAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQV-RWVYLEDLKDDVTTADKLWIFAHLLMPRLAQV 360 (718)
T ss_pred ccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccc-cEEEhhhhhhhcchhHHHHHHHHHhCCccccC
Confidence 999999999999999999999999999876433210 001000000 0010111000000000 0000000001112
Q ss_pred CCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 157 TNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 157 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
...++++++++|||||||.||+|.++|.++...+......+++.++|++++.+|++|.+++...++.++..|+++++.+.
T Consensus 361 ~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~ 440 (718)
T PRK08043 361 KQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPS 440 (718)
T ss_pred CCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCC
Confidence 34578999999999999999999999999998888878888899999999999999999998878899999999998763
Q ss_pred CCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccc
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEA 316 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~ 316 (431)
.++...+++.+.++++|++..+|+++..+.+.. ...+++++|.+++||+++++++.+.+++.+|+++++.||+||+
T Consensus 441 -~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~---~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~ 516 (718)
T PRK08043 441 -PLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA---NPYDFARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTEC 516 (718)
T ss_pred -cccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc---CcccccceEEEEEeCccCCHHHHHHHHHHcCCCeecccCcccc
Confidence 356778889999999999999999998876542 1234789999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccC--cch-------hhh-ccc
Q 014065 317 THLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNN--PEA-------NKS-AFL 385 (431)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~--~~~-------~~~-~~~ 385 (431)
++.+..... .....+++|+|+ +.+++++|+++. ++.|||+++|++++.||+++ ++. +.+ .+.
T Consensus 517 ~~~~~~~~~---~~~~~~svG~p~pg~~~~i~d~~~~----~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~ 589 (718)
T PRK08043 517 APVVSINVP---MAAKPGTVGRILPGMDARLLSVPGI----EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEME 589 (718)
T ss_pred cceEEecCC---cccCCCCCCCcCCCCeeEEecCCCC----CCceEEEEecCCccccccCCCCccccccccccccccccc
Confidence 877655432 234578999999 899999997653 45699999999999999983 331 111 234
Q ss_pred CCceecCceEEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 386 FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 386 ~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
+|||+|||+|++|+||++++.||.+|+||++|++|+|.|||.+
T Consensus 590 ~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~ 632 (718)
T PRK08043 590 RGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQL 632 (718)
T ss_pred CCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHH
Confidence 6999999999999999999999999999999999999999985
No 57
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-59 Score=459.80 Aligned_cols=426 Identities=27% Similarity=0.387 Sum_probs=350.4
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecC-CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSG-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
.+.|+.++|++.++++|+++|+++.+ ++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 16 ~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~ 95 (558)
T PRK12583 16 LTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGA 95 (558)
T ss_pred ccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCC
Confidence 45789999999999999999998753 47899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchh-----HHHHHHHhcC-----------cc--cccccccccc--hhhh
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA-----AAQAAASKLN-----------IS--HATATLLDAD--SELT 140 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~-----------~~--~~~~~~~~~~--~~~~ 140 (431)
+++++++..+.+++.++++.++++.+|+++.... .+........ .. ...+...... ....
T Consensus 96 ~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (558)
T PRK12583 96 ILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPGFLA 175 (558)
T ss_pred EEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCccccc
Confidence 9999999999999999999999999999865321 1111111100 00 0000000000 0000
Q ss_pred hhhcccc-----ccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHH
Q 014065 141 LSLAHSE-----SDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVH 215 (431)
Q Consensus 141 ~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 215 (431)
+...... ............++++++++|||||||.||+|.++|.++..++......+++.++++++..+|++|.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 255 (558)
T PRK12583 176 WHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLCVPVPLYHCF 255 (558)
T ss_pred hHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEEEecCchhhh
Confidence 0000000 00001112234578899999999999999999999999998888888888999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHH
Q 014065 216 GMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVI 295 (431)
Q Consensus 216 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~ 295 (431)
+....++.++..|++++++.. .+++..+++.++++++|++.++|+++..++...... ..+++++|.+++||+++++++
T Consensus 256 g~~~~~~~~l~~g~~v~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~~lr~i~~~G~~~~~~~ 333 (558)
T PRK12583 256 GMVLANLGCMTVGACLVYPNE-AFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRG-NFDLSSLRTGIMAGAPCPIEV 333 (558)
T ss_pred hHHHHHHHHHhcCceEEeecC-CCCHHHHHHHHHHcCCeEEeccHHHHHHHHcccccc-CCCchhheEEEecCCCCCHHH
Confidence 998889999999999987653 578999999999999999999999998887665432 345789999999999999999
Q ss_pred HHHHHHHhC-CceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCcccccc
Q 014065 296 LSRLEEAFG-APVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGY 373 (431)
Q Consensus 296 ~~~~~~~~~-~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy 373 (431)
.+++.+.++ ..+++.||+||++.++..+...........++|+|. ++.++++|+++.+++.|+.|||+++|+.++.||
T Consensus 334 ~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~gy 413 (558)
T PRK12583 334 MRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDGATVPRGEIGELCTRGYSVMKGY 413 (558)
T ss_pred HHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCCCCCCCCCeeEEEEEeCccchhh
Confidence 999999886 579999999999987766543222334567899999 899999998899999999999999999999999
Q ss_pred ccCcchhhhcc-cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 374 KNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 374 ~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+++++.+...+ .++||+|||+|++++||++++.||.+|+|+++|.+|+|.+||.+.
T Consensus 414 ~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l 470 (558)
T PRK12583 414 WNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFL 470 (558)
T ss_pred cCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHH
Confidence 99998887777 679999999999999999999999999999999999999999753
No 58
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-59 Score=456.16 Aligned_cols=420 Identities=27% Similarity=0.359 Sum_probs=349.1
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
...|+.++|.++++++|+++|+++.+ +.+||.||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~ 88 (524)
T PRK06188 10 SGATYGHLLVSALKRYPDRPALVLGD-TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLR 88 (524)
T ss_pred CCccHHHHHHHHHHHCCCCeEEEECC-CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCE
Confidence 45689999999999999999999755 79999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCC-chhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAE-GNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDP 160 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (431)
++|++|..+.+++.++++.++++.+++++. ..................+..........+..... ............+
T Consensus 89 ~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 167 (524)
T PRK06188 89 RTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAA-KFGPAPLVAAALP 167 (524)
T ss_pred EEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhh-ccCcccccccCCC
Confidence 999999999999999999999999999876 33333222221111111111111100000000000 0001111122234
Q ss_pred CCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCC
Q 014065 161 SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFS 240 (431)
Q Consensus 161 ~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~ 240 (431)
+++++++|||||||.||+|.++|.++...+......+++..++++++.+|++|.+++. ++.++..|+++++.+ .++
T Consensus 168 ~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~--~~~~l~~G~~~~~~~--~~~ 243 (524)
T PRK06188 168 PDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF--FLPTLLRGGTVIVLA--KFD 243 (524)
T ss_pred CCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH--HHHHHHcCCEEEEcC--CCC
Confidence 6699999999999999999999999999888888888999999999999999998864 578899999999987 678
Q ss_pred hhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcc
Q 014065 241 ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320 (431)
Q Consensus 241 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~ 320 (431)
+..+++.++++++|++.++|+++..+++..... ..+++++|.+++||++++++..+.+.+.++..+++.||+||++..+
T Consensus 244 ~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~-~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 322 (524)
T PRK06188 244 PAEVLRAIEEQRITATFLVPTMIYALLDHPDLR-TRDLSSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTEAPMVI 322 (524)
T ss_pred HHHHHHHHHHhCCEEEEehHHHHHHHHhCcCcc-CCCCcceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCccccCCce
Confidence 999999999999999999999999998876543 2357899999999999999999999888998999999999997665
Q ss_pred cCCCCCCC---CCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEE
Q 014065 321 SSNPLPED---GPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGY 396 (431)
Q Consensus 321 ~~~~~~~~---~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~ 396 (431)
........ ......++|+|+ ++.++++|+++++++.|+.|||+++|+.++.||++++..+...+.+|||+|||+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~ 402 (524)
T PRK06188 323 TYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVAR 402 (524)
T ss_pred eecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEE
Confidence 54432111 234567899999 89999999999999999999999999999999999999998888899999999999
Q ss_pred EcCCCeEEEecccccceecCCeeccccceecc
Q 014065 397 FDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 397 ~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
++++|++++.||.+|+|+++|++|+|.+||.+
T Consensus 403 ~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~ 434 (524)
T PRK06188 403 EDEDGFYYIVDRKKDMIVTGGFNVFPREVEDV 434 (524)
T ss_pred EcCCccEEEEeccccceecCCEEECHHHHHHH
Confidence 99999999999999999999999999999975
No 59
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=5.3e-59 Score=457.80 Aligned_cols=422 Identities=25% Similarity=0.404 Sum_probs=340.4
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAA-GINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~-gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
+.++.++|.++++++|+++|++..+ +++||.||.++++++|++|.+. |+++||+|+++++|+++++++++||+++|++
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~~~-~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v 101 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSNLG-VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLI 101 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEecCC-ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 3589999999999999999998654 6999999999999999999985 9999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccc-c-----------ccc--------------
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATAT-L-----------LDA-------------- 135 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~-------------- 135 (431)
++++++..+.+++.++++.++++++++++...+................. . ...
T Consensus 102 ~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (562)
T PRK12492 102 VVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHL 181 (562)
T ss_pred EeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccccCC
Confidence 99999999999999999999999999987654444333221110000000 0 000
Q ss_pred chhhhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhc---------CCC-CCeE
Q 014065 136 DSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYK---------LTE-SDST 205 (431)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~---------~~~-~~~~ 205 (431)
.....+...................+++++++|||||||.||+|.++|.++..+.......+. +.. ++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (562)
T PRK12492 182 PQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEVM 261 (562)
T ss_pred cccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeEE
Confidence 000000000000000011122345688999999999999999999999999877665554432 222 3567
Q ss_pred EEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEE
Q 014065 206 VIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIR 285 (431)
Q Consensus 206 ~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~ 285 (431)
+..+|++|.+++...++..+..|...++... ..++..+++.++++++|++..+|+++..+.+..... ..+++++|.++
T Consensus 262 ~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~lr~~~ 339 (562)
T PRK12492 262 IAPLPLYHIYAFTANCMCMMVSGNHNVLITN-PRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFK-DLDFSALKLTN 339 (562)
T ss_pred EEecchHHHHHHHHHHHHHhhcCceEEEecC-CcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcc-cccccceeEEE
Confidence 8899999999988777778888887776542 468899999999999999999999999998765432 34578999999
Q ss_pred eccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEE
Q 014065 286 SCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCI 364 (431)
Q Consensus 286 ~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v 364 (431)
+||+++++++.+.+.+.+++++++.||+||++.++..+... .....+++|+|+ +++++|+|+++++++.|+.|||++
T Consensus 340 ~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~--~~~~~~~~G~p~~~~~v~ivd~~~~~~~~g~~Gel~v 417 (562)
T PRK12492 340 SGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYG--ELARLGTVGIPVPGTALKVIDDDGNELPLGERGELCI 417 (562)
T ss_pred eccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCc--ccccCCccceecCCCEEEEECCCCCCCCCCCceEEEE
Confidence 99999999999999998899999999999998776654421 233457899999 899999999999999999999999
Q ss_pred eCCccccccccCcchhhhccc-CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 365 RGPNVTKGYKNNPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 365 ~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|+.++.||+++++.+.+.|. +|||+|||+|++|++|++++.||.+|+||++|++|+|.+||.+.
T Consensus 418 ~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l 483 (562)
T PRK12492 418 KGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVV 483 (562)
T ss_pred eCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHH
Confidence 999999999999998888874 69999999999999999999999999999999999999999864
No 60
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.2e-59 Score=499.61 Aligned_cols=423 Identities=24% Similarity=0.326 Sum_probs=349.4
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
.|+.+.++++++++|+++|+++.+++++||+||.++++++|++|++ ++++||+|+++++|+++++++++||+++|++++
T Consensus 615 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v 693 (1146)
T PRK08633 615 PPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGKVPV 693 (1146)
T ss_pred CCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCCEEE
Confidence 5789999999999999999986555799999999999999999987 589999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHH--hcCcccccccccccc----hhhhhhhcccc--ccc---cc
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAAS--KLNISHATATLLDAD----SELTLSLAHSE--SDT---NA 152 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~---~~ 152 (431)
|++|..+.+++.+++++++++.++++++..+...+... ........+...+.. ....+...... ... ..
T Consensus 694 ~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 773 (1146)
T PRK08633 694 NLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLLPARLLKR 773 (1146)
T ss_pred EeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccCCHHHHHh
Confidence 99999999999999999999999998765444321100 000001111111100 00000000000 000 00
Q ss_pred cccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEE
Q 014065 153 ISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVT 232 (431)
Q Consensus 153 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~ 232 (431)
.......++++++++|||||||.||+|.++|.++..++......++..++|++++.+|++|.+++...++.++..|++++
T Consensus 774 ~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v 853 (1146)
T PRK08633 774 LYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVV 853 (1146)
T ss_pred hccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEE
Confidence 00134567899999999999999999999999999988888888889999999999999999999887889999999998
Q ss_pred eCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccC
Q 014065 233 LPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYA 312 (431)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg 312 (431)
+.+. .+++..+++.++++++|++.++|++++.+.+..... ..+++++|.+++||+++++++.+.+++.+++++++.||
T Consensus 854 ~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG 931 (1146)
T PRK08633 854 YHPD-PTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLH-PLMFASLRLVVAGAEKLKPEVADAFEEKFGIRILEGYG 931 (1146)
T ss_pred EeCC-CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccC-cccCCCeeeEEEcCCcCCHHHHHHHHHHhCCCeecccc
Confidence 8653 578999999999999999999999999988754332 34578999999999999999999999999999999999
Q ss_pred cccccCcccCCCCCC-------CCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhc
Q 014065 313 MTEATHLMSSNPLPE-------DGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSA 383 (431)
Q Consensus 313 ~tE~~~~~~~~~~~~-------~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~ 383 (431)
+||++++++.+.... +....++++|+|+ +++++|+| +++++++.|+.|||+++|+.++.||+++++.+++.
T Consensus 932 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~ 1011 (1146)
T PRK08633 932 ATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGDPEKTAEV 1011 (1146)
T ss_pred cccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCCccchHHH
Confidence 999987765543211 1123567899999 89999999 46899999999999999999999999999999888
Q ss_pred ccC----CceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 384 FLF----GWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 384 ~~~----g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+.+ |||+|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 1012 ~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l 1061 (1146)
T PRK08633 1012 IKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEEL 1061 (1146)
T ss_pred hhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHH
Confidence 877 9999999999999999999999999999999999999999863
No 61
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=9.3e-60 Score=506.78 Aligned_cols=421 Identities=21% Similarity=0.280 Sum_probs=338.1
Q ss_pred ccHHHHHHHHHHhcCCcceEEec--------CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVS--------GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAV 75 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~--------~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 75 (431)
.++.++|+++|+++|+++|+++. +++++||+||.++++++|++|++.|+++||+|+++++|+++++++++||
T Consensus 236 ~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~ 315 (1389)
T TIGR03443 236 GAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGV 315 (1389)
T ss_pred CcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHH
Confidence 46899999999999999999852 3479999999999999999999999999999999999999999999999
Q ss_pred HHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch---hHHHHHHHh-cCccc--ccccccccch----hhhhh---
Q 014065 76 IRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN---AAAQAAASK-LNISH--ATATLLDADS----ELTLS--- 142 (431)
Q Consensus 76 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---~~~~~~~~~-~~~~~--~~~~~~~~~~----~~~~~--- 142 (431)
+++|++++|++|.++.+++.++++.+++++++++.... ......... ..... ..+.+.+... .....
T Consensus 316 l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (1389)
T TIGR03443 316 LKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLEGGETD 395 (1389)
T ss_pred HhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccccccccccccccc
Confidence 99999999999999999999999999999999876421 111111100 00000 0000000000 00000
Q ss_pred hcccccc-ccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHH
Q 014065 143 LAHSESD-TNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGL 221 (431)
Q Consensus 143 ~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 221 (431)
....... ..........++++++++|||||||.||+|+++|+++.+.+......+++.++++++...|++|..++.. +
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~-i 474 (1389)
T TIGR03443 396 VLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSGIAHDPIQRD-M 474 (1389)
T ss_pred ccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecCceecchHHH-H
Confidence 0000000 0001112345789999999999999999999999999999888888899999999999999999988766 8
Q ss_pred HHHHhcCCEEEeCCCCC-CChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHH
Q 014065 222 LSSFAAGAAVTLPAAGR-FSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLE 300 (431)
Q Consensus 222 ~~~l~~G~~~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~ 300 (431)
+.+|..|+++++++... .++..+++.++++++|++.++|++++.+.... ...++++|.+++||+++++...+.+.
T Consensus 475 ~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~----~~~~~~lr~~~~gGe~l~~~~~~~~~ 550 (1389)
T TIGR03443 475 FTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA----TTPIPSLHHAFFVGDILTKRDCLRLQ 550 (1389)
T ss_pred HHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc----cccCCCccEEEEecccCCHHHHHHHH
Confidence 99999999999976422 36889999999999999999999999887542 22378999999999999999999988
Q ss_pred HHh-CCceecccCcccccCcccCCCCCCCC--------CCCCCCccccc-cceEEEECCC--CCcCCCCceeeEEEeCCc
Q 014065 301 EAF-GAPVLEAYAMTEATHLMSSNPLPEDG--------PHKPGSVGRPV-GQEIAILDEI--GVPQEGGAKGEVCIRGPN 368 (431)
Q Consensus 301 ~~~-~~~i~~~yg~tE~~~~~~~~~~~~~~--------~~~~~~~G~~~-~~~~~i~d~~--~~~~~~~~~Gel~v~~~~ 368 (431)
+.+ +++++|.||+||++..++........ .....++|+|+ +++++|+|++ +++++.|+.|||+|+||+
T Consensus 551 ~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~ 630 (1389)
T TIGR03443 551 TLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYVRAGG 630 (1389)
T ss_pred HhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEecccc
Confidence 766 78999999999998766543221110 11345789999 8999999965 578999999999999999
Q ss_pred cccccccCcchhhhccc-----------------------------CCceecCceEEEcCCCeEEEecccccceecCCee
Q 014065 369 VTKGYKNNPEANKSAFL-----------------------------FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNL 419 (431)
Q Consensus 369 ~~~gy~~~~~~~~~~~~-----------------------------~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~ 419 (431)
+++||+++++.+++.|. ++||+|||+|++++||.|+|.||.||+||++|++
T Consensus 631 v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~r 710 (1389)
T TIGR03443 631 LAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFR 710 (1389)
T ss_pred cchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEeCcEE
Confidence 99999999999988773 4799999999999999999999999999999999
Q ss_pred ccccceeccc
Q 014065 420 HESISLFLAK 429 (431)
Q Consensus 420 i~~~~iE~a~ 429 (431)
|+|.|||.+.
T Consensus 711 I~p~eIE~~l 720 (1389)
T TIGR03443 711 IELGEIDTHL 720 (1389)
T ss_pred ecHHHHHHHH
Confidence 9999999763
No 62
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-59 Score=466.57 Aligned_cols=413 Identities=23% Similarity=0.335 Sum_probs=325.6
Q ss_pred cccHHHHHHHHHHhcCCcceEEecC------C--CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHH
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSG------K--FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLA 74 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~------~--~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA 74 (431)
.+|+.++++++++++|+++|+++.+ + +++||+||.++++++|++|.+. +++||+|+++++|+++++++++|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA 111 (612)
T PRK12476 33 GTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFA 111 (612)
T ss_pred cCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHH
Confidence 4689999999999999999998632 1 4899999999999999999986 99999999999999999999999
Q ss_pred HHHhCcEEEec-CCCCC--HHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCc-c-cccccccccchhhhhhhcccccc
Q 014065 75 VIRARATAAPL-NAAYT--PDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNI-S-HATATLLDADSELTLSLAHSESD 149 (431)
Q Consensus 75 ~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 149 (431)
|+++|++++|+ ++..+ .+++.++++.++++++|++++..+.+......... . ...+..... .. ..
T Consensus 112 ~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~----~~ 181 (612)
T PRK12476 112 AIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAI------PD----SA 181 (612)
T ss_pred HHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccc------cc----cc
Confidence 99999999999 57766 78999999999999999987765554443322211 0 011111100 00 00
Q ss_pred ccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhc-CCCCCeEEEecChhhHHHHHHHHHHHHhcC
Q 014065 150 TNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYK-LTESDSTVIVLPLFHVHGMLAGLLSSFAAG 228 (431)
Q Consensus 150 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G 228 (431)
..........++++++++|||||||.||+|.++|+++..++......++ +.++++.++.+|++|..++...+..++..|
T Consensus 182 ~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg 261 (612)
T PRK12476 182 GESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGG 261 (612)
T ss_pred cccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHHHHHHHhcCC
Confidence 0011112345689999999999999999999999999887777666677 788999999999999999877444445444
Q ss_pred CEEEeCCCCCC--ChhhHHHHHH--HhcceeeecchHHHHHHHhccc---CCCCCCCCCccEEEeccCCCcHHHHHHHHH
Q 014065 229 AAVTLPAAGRF--SASTFWQDMI--KYNATWYTAVPTIHQIVLDRHV---AKPEPVYPKLRFIRSCSASLAPVILSRLEE 301 (431)
Q Consensus 229 ~~~~~~~~~~~--~~~~~~~~i~--~~~~t~~~~~p~~~~~l~~~~~---~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~ 301 (431)
.++++.+. .+ ++..+++.++ +++++.++.+|+++..++.... .....+++++| +++||+++++++.+.+.+
T Consensus 262 ~~~~~~~~-~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~~ 339 (612)
T PRK12476 262 HSTLMSPT-AFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFNK 339 (612)
T ss_pred eEEEECHH-HHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHHHHHHH
Confidence 44444331 23 7889999995 4899999999999888766421 11233578999 999999999999999998
Q ss_pred Hh---CC---ceecccCcccccCcccCCCCCCC------------------------CCCCCCCccccc-cceEEEECCC
Q 014065 302 AF---GA---PVLEAYAMTEATHLMSSNPLPED------------------------GPHKPGSVGRPV-GQEIAILDEI 350 (431)
Q Consensus 302 ~~---~~---~i~~~yg~tE~~~~~~~~~~~~~------------------------~~~~~~~~G~~~-~~~~~i~d~~ 350 (431)
.| |+ .+++.||+||++..++....... .....+++|+|+ +.+++|+|++
T Consensus 340 ~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~ 419 (612)
T PRK12476 340 AFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPD 419 (612)
T ss_pred HHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCC
Confidence 87 44 48999999998865543221100 001235789999 8999999987
Q ss_pred -CCcCCCCceeeEEEeCCccccccccCcchhhhccc-------------------CCceecCceEEEcCCCeEEEecccc
Q 014065 351 -GVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL-------------------FGWFHTGDIGYFDSDGYLHLVGRIK 410 (431)
Q Consensus 351 -~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------------------~g~~~TGD~~~~~~~g~l~~~gR~~ 410 (431)
|++++.|+.|||+++|++++.||+++++.+++.|. ++||+|||+|++ +||+++|+||.|
T Consensus 420 ~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~-~dG~l~i~GR~~ 498 (612)
T PRK12476 420 TGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY-LDGELYITGRIA 498 (612)
T ss_pred CCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeecccccee-ECCEEEEEeccC
Confidence 99999999999999999999999999999888774 249999999998 599999999999
Q ss_pred cceecCCeeccccceeccc
Q 014065 411 ELINRGGNLHESISLFLAK 429 (431)
Q Consensus 411 d~i~~~G~~i~~~~iE~a~ 429 (431)
|+||++|++|+|.|||.+.
T Consensus 499 d~I~~~G~~I~p~eIE~~l 517 (612)
T PRK12476 499 DLIVIDGRNHYPQDIEATV 517 (612)
T ss_pred cEEEECCcccCHHHHHHHH
Confidence 9999999999999999763
No 63
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=6.1e-59 Score=456.05 Aligned_cols=418 Identities=27% Similarity=0.389 Sum_probs=337.9
Q ss_pred cccHHHHHHHHHHhcCCcceEEec-CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVS-GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
..|+.+.+.++++.+|+++|+.+. +++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 27 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 106 (546)
T PLN02330 27 KLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGV 106 (546)
T ss_pred CCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcE
Confidence 368999999999999999999864 3579999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccccc--chhhhhhhc-cccc-cccccccCC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA--DSELTLSLA-HSES-DTNAISKLT 157 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~-~~~~~~~~~ 157 (431)
++|+++..+.+++.++++.++++++++++......... ... .+.+... .....+... .... .........
T Consensus 107 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~----~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (546)
T PLN02330 107 FSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL----GLP--VIVLGEEKIEGAVNWKELLEAADRAGDTSDNEE 180 (546)
T ss_pred eccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc----CCc--EEEecCCCCCCcccHHHHHhhccccCccccccc
Confidence 99999999999999999999999999998766554322 111 1111110 000001100 0000 001111223
Q ss_pred CCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhc--CCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 158 NDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYK--LTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 158 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
..++++++++|||||||.||+|.++|.++..++.......+ ....++.+..+|++|.+++...++.++..|+++++.+
T Consensus 181 ~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~ 260 (546)
T PLN02330 181 ILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMS 260 (546)
T ss_pred CCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEec
Confidence 45688999999999999999999999998876543221111 1234678899999999998877888999999999987
Q ss_pred CCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCC--CccEEEeccCCCcHHHHHHHHHHh-CCceecccC
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYP--KLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYA 312 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~--~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg 312 (431)
.+++..+++.++++++|.+.++|+++..+++..... ..+++ ++|.+++||+++++++++++.+.| ++++++.||
T Consensus 261 --~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG 337 (546)
T PLN02330 261 --RFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVE-EFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYG 337 (546)
T ss_pred --ccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCcccc-ccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEeccc
Confidence 789999999999999999999999999998754322 12233 578999999999999999999998 899999999
Q ss_pred cccccCcccCCCCCC--CCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cCC
Q 014065 313 MTEATHLMSSNPLPE--DGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFG 387 (431)
Q Consensus 313 ~tE~~~~~~~~~~~~--~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g 387 (431)
+||++.+........ .......++|+|+ +++++++| +++++++.|+.|||+++|+.++.||+++++.+.+.+ .+|
T Consensus 338 ~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g 417 (546)
T PLN02330 338 LTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDG 417 (546)
T ss_pred ccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhhccCccchhhhccCCC
Confidence 999986654332111 1124456899999 89999999 568999999999999999999999999998887776 469
Q ss_pred ceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 388 WFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 388 ~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+|||+|++++||++++.||.+|+|+++|++|+|.+||.+.
T Consensus 418 ~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l 459 (546)
T PLN02330 418 WLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAIL 459 (546)
T ss_pred ceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHH
Confidence 999999999999999999999999999999999999999863
No 64
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-58 Score=455.58 Aligned_cols=422 Identities=26% Similarity=0.425 Sum_probs=341.9
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.++|...++++|+++|+++.+ +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 22 ~~~i~~~l~~~a~~~p~~~a~~~~~-~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~ 100 (557)
T PRK07059 22 YPSLADLLEESFRQYADRPAFICMG-KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVV 100 (557)
T ss_pred CCCHHHHHHHHHHHcCCCceEEEcC-ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEE
Confidence 4689999999999999999999755 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccccc-------------------------ch
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA-------------------------DS 137 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~ 137 (431)
+|++|..+.+++.++++.++++++++++......................... ..
T Consensus 101 v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (557)
T PRK07059 101 VNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSLPG 180 (557)
T ss_pred eccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccccccccccccccccccccccccCCCC
Confidence 99999999999999999999999999877655444433221111110000000 00
Q ss_pred hhhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhc----C---CCCCeEEEecC
Q 014065 138 ELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYK----L---TESDSTVIVLP 210 (431)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~----~---~~~~~~~~~~p 210 (431)
...+..................++++++++|||||||.||+|.++|.+++.++......+. . .....++..+|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 260 (557)
T PRK07059 181 HVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCALP 260 (557)
T ss_pred cccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEeCC
Confidence 0000000000011111223456789999999999999999999999999876554332221 1 12346778899
Q ss_pred hhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCC
Q 014065 211 LFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSAS 290 (431)
Q Consensus 211 ~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~ 290 (431)
++|.+++....+.++..|++.++.+. ..++..+++.+++++++.+..+|.++..+.+..... ..+++++|.++.||++
T Consensus 261 l~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~-~~~~~~l~~~~~gg~~ 338 (557)
T PRK07059 261 LYHIFALTVCGLLGMRTGGRNILIPN-PRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFD-KLDFSKLIVANGGGMA 338 (557)
T ss_pred cHHHHHHHHHHHHHHhhcceEEEecC-CcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcC-cCCchhheEEEecccc
Confidence 99999887777888888888776653 458889999999999999999999999998765432 3347899999999999
Q ss_pred CcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCcc
Q 014065 291 LAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNV 369 (431)
Q Consensus 291 ~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~ 369 (431)
+++.+.+.+.+.+++++++.||+||++.++..+.. +....++++|+|+ +.+++++|++|++++.|+.|||+++|+.+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~--~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~g~~Gel~v~g~~~ 416 (557)
T PRK07059 339 VQRPVAERWLEMTGCPITEGYGLSETSPVATCNPV--DATEFSGTIGLPLPSTEVSIRDDDGNDLPLGEPGEICIRGPQV 416 (557)
T ss_pred CCHHHHHHHHHHhCCCeeeccccccccchhhcCCC--CCCCcCCcccCccCCcEEEEECCCCCCCCCCCceEEEEeCCcc
Confidence 99999999999899999999999999987665432 2234567999999 89999999999999999999999999999
Q ss_pred ccccccCcchhhhcc-cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 370 TKGYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 370 ~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+.||+++++.+...+ .+|||+|||+++++++|++++.||.+|+|+++|++|+|.+||.+.
T Consensus 417 ~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l 477 (557)
T PRK07059 417 MAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVV 477 (557)
T ss_pred chhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHH
Confidence 999999998888776 479999999999999999999999999999999999999999863
No 65
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.6e-59 Score=503.32 Aligned_cols=409 Identities=24% Similarity=0.341 Sum_probs=347.0
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.++|.++++.+|+++|+++.+ +.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 457 ~~~l~~~~~~~~~~~p~~~Al~~~~-~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~ 535 (1296)
T PRK10252 457 ETTLSALVAQQAAKTPDAPALADAR-YQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAW 535 (1296)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEcCC-CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 3579999999999999999998755 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|++|+.+.+++.++++.+++++++++.......... ..... .. ..... ............+++
T Consensus 536 vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~------~~~~~-~~-------~~~~~--~~~~~~~~~~~~~~~ 599 (1296)
T PRK10252 536 LPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV------PDLTS-LC-------YNAPL--APQGAAPLQLSQPHH 599 (1296)
T ss_pred EecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC------CCcee-ee-------ccccc--ccccCCCCCCCCCCC
Confidence 9999999999999999999999999987644332111 00000 00 00000 000011112235789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-CCCh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG-RFSA 241 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~ 241 (431)
+++++|||||||.||+|.++|.++.+.+......+++.++++++...|++|..+++. ++.+|..|+++++.+.. ..++
T Consensus 600 ~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~l~~G~~l~~~~~~~~~~~ 678 (1296)
T PRK10252 600 TAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWE-FFWPFIAGAKLVMAEPEAHRDP 678 (1296)
T ss_pred eEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHH-HHHHHhCCCEEEECChhccCCH
Confidence 999999999999999999999999999999899999999999999999999998876 88899999999987632 4589
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCCC-CCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP-EPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~-~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~ 320 (431)
..+++.++++++|++.++|+++..+++...... ...++++|.+++||+++++++.+.+.+.++++++|.||+||++..+
T Consensus 679 ~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 758 (1296)
T PRK10252 679 LAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDV 758 (1296)
T ss_pred HHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhhee
Confidence 999999999999999999999999887643322 2236899999999999999999999988899999999999998776
Q ss_pred cCCCCCCCC----CCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccC-------Cc
Q 014065 321 SSNPLPEDG----PHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF-------GW 388 (431)
Q Consensus 321 ~~~~~~~~~----~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------g~ 388 (431)
+........ .....++|+|+ ++.++|+|+++++++.|+.|||+++|+++++||+++++.+++.|.. +|
T Consensus 759 ~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~ 838 (1296)
T PRK10252 759 SWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERM 838 (1296)
T ss_pred eeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEE
Confidence 654432211 23456899999 8999999999999999999999999999999999999999888742 49
Q ss_pred eecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 389 FHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 389 ~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+|||+|++++||.++++||.|++||++|++|+|.|||.+.
T Consensus 839 y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l 879 (1296)
T PRK10252 839 YRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAM 879 (1296)
T ss_pred EecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHH
Confidence 99999999999999999999999999999999999999863
No 66
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-59 Score=463.33 Aligned_cols=412 Identities=22% Similarity=0.325 Sum_probs=321.5
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCC-----CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHH
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGK-----FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIR 77 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~-----~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~ 77 (431)
..|+.++|+++++++|+++|+++.+. +++||+||.++++++|++|++.|+++||+|+++++|+++++++++||++
T Consensus 48 ~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 127 (624)
T PRK12582 48 PRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQ 127 (624)
T ss_pred ccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHH
Confidence 46799999999999999999987431 5899999999999999999999999999999999999999999999999
Q ss_pred hCcEEEecCCCCCH-----HHHHHHHhcCCceEEEecCCch-hHHHHHHHhcCcccccccccccc---hhhhhhhccccc
Q 014065 78 ARATAAPLNAAYTP-----DEFEFYLSDSESKLLLTPAEGN-AAAQAAASKLNISHATATLLDAD---SELTLSLAHSES 148 (431)
Q Consensus 78 ~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 148 (431)
+|++++|++|.++. +++.++++.++++++|+++... ............. .+...... ....+.......
T Consensus 128 ~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~ 205 (624)
T PRK12582 128 AGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVT--VVHVTGPGEGIASIAFADLAATP 205 (624)
T ss_pred cCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCce--EEEEcCCCcccccccHHHHhhcC
Confidence 99999999999885 8999999999999999986421 1111111111111 11111100 001111110000
Q ss_pred ccc--ccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCC---CCeEEEecChhhHHHHHHHHHH
Q 014065 149 DTN--AISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTE---SDSTVIVLPLFHVHGMLAGLLS 223 (431)
Q Consensus 149 ~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~ 223 (431)
... ........++++++++|||||||.||+|.++|.++..+............ .++.+..+|++|.+++...++.
T Consensus 206 ~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~ 285 (624)
T PRK12582 206 PTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNANFNG 285 (624)
T ss_pred CcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHHHHHHH
Confidence 000 01112345789999999999999999999999999887766555444443 5799999999999998877888
Q ss_pred HHhcCCEEEeCCCCCCCh---hhHHHHHHHhcceeeecchHHHHHHHhcccCCC---CCCCCCccEEEeccCCCcHHHHH
Q 014065 224 SFAAGAAVTLPAAGRFSA---STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP---EPVYPKLRFIRSCSASLAPVILS 297 (431)
Q Consensus 224 ~l~~G~~~~~~~~~~~~~---~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~---~~~~~~l~~i~~~g~~~~~~~~~ 297 (431)
++..|+++++.+. .+++ ..+++.++++++|++.++|++++.+++...... ..+++++|.+++||+++++++.+
T Consensus 286 ~l~~G~tvvl~~~-~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~~~ 364 (624)
T PRK12582 286 LLWGGGTLYIDDG-KPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDLYE 364 (624)
T ss_pred HHhCceEEEEcCC-CcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHHHH
Confidence 9999999998653 2333 356777889999999999999999876543221 12367999999999999999999
Q ss_pred HHHHHh------CCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccc
Q 014065 298 RLEEAF------GAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVT 370 (431)
Q Consensus 298 ~~~~~~------~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~ 370 (431)
++.+.+ ++++++.||+||++.++..... .....+++|+|+ |++++++ +.|+.|||+++|++++
T Consensus 365 ~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~---~~~~~~svG~p~pg~~v~i~-------~~G~~GEl~vrg~~v~ 434 (624)
T PRK12582 365 RMQALAVRTTGHRIPFYTGYGATETAPTTTGTHW---DTERVGLIGLPLPGVELKLA-------PVGDKYEVRVKGPNVT 434 (624)
T ss_pred HHHHHHHhhcCCCceEEeccccccccceeecccC---CCCCCCCCCcCCCCcEEEEc-------cCCCceEEEEECCccc
Confidence 998863 3679999999999876653322 234567999999 8999986 3467899999999999
Q ss_pred cccccCcchhhhcc-cCCceecCceEEE-c---CCCeEEEeccccccee-cCCeeccccceec
Q 014065 371 KGYKNNPEANKSAF-LFGWFHTGDIGYF-D---SDGYLHLVGRIKELIN-RGGNLHESISLFL 427 (431)
Q Consensus 371 ~gy~~~~~~~~~~~-~~g~~~TGD~~~~-~---~~g~l~~~gR~~d~i~-~~G~~i~~~~iE~ 427 (431)
.||+++++.+++.| .+|||+|||+|++ | ++|+|++.||+||+|| .+|++|+|.+||.
T Consensus 435 ~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~ 497 (624)
T PRK12582 435 PGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRP 497 (624)
T ss_pred ccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHH
Confidence 99999999998888 4799999999998 4 5699999999999998 5899999998863
No 67
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.2e-58 Score=455.78 Aligned_cols=419 Identities=22% Similarity=0.316 Sum_probs=325.7
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
.|+.+.|.+.++.+|+++|+.+.+ .++||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++|++++
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~~~-~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~v 92 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIYGK-TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLN 92 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEECC-cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEe
Confidence 578899999999999999998755 6999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCc-----ccccccccccc-------hhhhhhhccccccc-
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNI-----SHATATLLDAD-------SELTLSLAHSESDT- 150 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-------~~~~~~~~~~~~~~- 150 (431)
|++|.++.+++.++++.++++++|++++..+.+.+....... ....+.+.... ....+.........
T Consensus 93 pl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (579)
T PLN03102 93 PINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLIQRGEPT 172 (579)
T ss_pred eccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHHhccCCC
Confidence 999999999999999999999999998776655554332210 01111111100 00000000000000
Q ss_pred cc---cccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhc
Q 014065 151 NA---ISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAA 227 (431)
Q Consensus 151 ~~---~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 227 (431)
.. .......++++++++|||||||.||+|.++|.++............+...++++..+|++|..++.. .+.++..
T Consensus 173 ~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~-~~~~~~~ 251 (579)
T PLN03102 173 PSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGWTF-TWGTAAR 251 (579)
T ss_pred CcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcchhH-HHHHHHh
Confidence 00 0011235689999999999999999999999997654444344445667788899999999988776 6677888
Q ss_pred CCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCce
Q 014065 228 GAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPV 307 (431)
Q Consensus 228 G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i 307 (431)
|+++++.+ .+++..+++.|+++++|++.++|+++..+.+..... ....++++.+++||+++++.+.+++++ +++++
T Consensus 252 g~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~~~~~~~gg~~~~~~~~~~~~~-~g~~i 327 (579)
T PLN03102 252 GGTSVCMR--HVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLD-LSPRSGPVHVLTGGSPPPAALVKKVQR-LGFQV 327 (579)
T ss_pred cCcEEeec--cCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccc-cCCcccceEEEECCCCCCHHHHHHHHH-cCCeE
Confidence 88888876 568889999999999999999999999998764322 223467888999999999999998865 69999
Q ss_pred ecccCcccccCcccCCCCCCCC-----------CCCCCCccccccceEEEEC-CCCCcCCC--CceeeEEEeCCcccccc
Q 014065 308 LEAYAMTEATHLMSSNPLPEDG-----------PHKPGSVGRPVGQEIAILD-EIGVPQEG--GAKGEVCIRGPNVTKGY 373 (431)
Q Consensus 308 ~~~yg~tE~~~~~~~~~~~~~~-----------~~~~~~~G~~~~~~~~i~d-~~~~~~~~--~~~Gel~v~~~~~~~gy 373 (431)
++.||+||+++.+........+ ....+..+.++ ..+.++| +.+++++. ++.|||+++|+++++||
T Consensus 328 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY 406 (579)
T PLN03102 328 MHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGL-ADVDVKNKETQESVPRDGKTMGEIVIKGSSIMKGY 406 (579)
T ss_pred EeecCccccCccccccccccccccCCcccccccccCCCcccccc-cceEEeccccccccCCCCCCceEEEEECcchhhhh
Confidence 9999999998654432111100 01122222232 3466677 34666764 36799999999999999
Q ss_pred ccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 374 KNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 374 ~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+++++.+.+.|.+|||+|||+|++|+||++++.||.+|+||++|++|+|.|||.+.
T Consensus 407 ~~~~~~t~~~f~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l 462 (579)
T PLN03102 407 LKNPKATSEAFKHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVL 462 (579)
T ss_pred cCChhhhHhhhccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999863
No 68
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.4e-58 Score=461.72 Aligned_cols=418 Identities=21% Similarity=0.226 Sum_probs=323.6
Q ss_pred ccHHH-HHHHHHHhcCCcceEEecCC-------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Q 014065 4 VTLIG-LLNQVIDQFSSKRALSVSGK-------FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAV 75 (431)
Q Consensus 4 ~tl~~-~l~~~a~~~p~~~a~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 75 (431)
+|+.+ +|++++.++|+++|+++.+. +++||+||.++++++|++|++.|+++||+|+++++|++++++++|||
T Consensus 174 ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~ 253 (728)
T PLN03052 174 LNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAI 253 (728)
T ss_pred eEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 34444 55565567899999997542 47999999999999999999999999999999999999999999999
Q ss_pred HHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch------hHHHHHHHhcCcccccccccccc---------hhhh
Q 014065 76 IRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN------AAAQAAASKLNISHATATLLDAD---------SELT 140 (431)
Q Consensus 76 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 140 (431)
+++|++++|++|.++.+++.+++++++++++|+++... +....+...... ..+.+.... ....
T Consensus 254 ~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~--~~iv~~~~~~~~~~~~~~~~~~ 331 (728)
T PLN03052 254 ILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAP--KAIVLPADGKSVRVKLREGDMS 331 (728)
T ss_pred HHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCC--cEEEEeCCCCccccccccCCcc
Confidence 99999999999999999999999999999999987532 111121111110 011010000 0011
Q ss_pred hhhcccccc----ccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHH
Q 014065 141 LSLAHSESD----TNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHG 216 (431)
Q Consensus 141 ~~~~~~~~~----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 216 (431)
+........ ...........+++++|+|||||||.||+|+++|.+++..+......++++++|+++...|++|+++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~~~l~w~~g 411 (728)
T PLN03052 332 WDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWMMG 411 (728)
T ss_pred HHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEECCCcHHHhH
Confidence 111000000 0001111234689999999999999999999999998877666666678899999999999999999
Q ss_pred HHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHH
Q 014065 217 MLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVIL 296 (431)
Q Consensus 217 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~ 296 (431)
.+. ++.+|..|+++++.++ ..++..+++.++++++|++..+|++++.+.+.... ...+++++|.++++|++++++..
T Consensus 412 ~~~-v~~~L~~Gat~vl~~g-~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~-~~~dlssLr~i~s~Ge~l~~~~~ 488 (728)
T PLN03052 412 PWL-VYASLLNGATLALYNG-SPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCM-AGLDWSSIRCFGSTGEASSVDDY 488 (728)
T ss_pred HHH-HHHHHHhCCEEEEeCC-CCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCc-ccCChhheeEEEecCCCCCHHHH
Confidence 865 7899999999999864 34567899999999999999999999998776432 34568999999999999999999
Q ss_pred HHHHHHhC-CceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCc--eeeEEEeCCc--cc
Q 014065 297 SRLEEAFG-APVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGA--KGEVCIRGPN--VT 370 (431)
Q Consensus 297 ~~~~~~~~-~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~--~Gel~v~~~~--~~ 370 (431)
.++.+.++ .++.+.||+||+++.+..... .....++++|+|. |++++|+|++|++++.|+ .|||+++++. ..
T Consensus 489 ~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~--~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~~~~~~~~ 566 (728)
T PLN03052 489 LWLMSRAGYKPIIEYCGGTELGGGFVTGSL--LQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALFPLMFGAS 566 (728)
T ss_pred HHHHHhcCCCCeEeeccChhhCcccccCCC--CCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEeCCCCCCC
Confidence 88888775 579999999999865443221 1234567899998 899999999999999885 6999998653 33
Q ss_pred cccccCcchhhhccc-----CC--ceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 371 KGYKNNPEANKSAFL-----FG--WFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 371 ~gy~~~~~~~~~~~~-----~g--~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.+|+++. ....-|. .| ||+|||++++|+||+++++||.||+||++|.+|+|.|||.+.
T Consensus 567 ~~~~~~~-~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l 631 (728)
T PLN03052 567 STLLNAD-HYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVC 631 (728)
T ss_pred ccccCch-hhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHH
Confidence 4566543 2222221 23 899999999999999999999999999999999999999873
No 69
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.1e-59 Score=463.39 Aligned_cols=418 Identities=18% Similarity=0.183 Sum_probs=325.5
Q ss_pred cHHHHHHHHHHhcCCcceEEecC----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSG----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
|+.+.+.++ .+|+++|+++.+ .+++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Ga 164 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGA 164 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Confidence 455555442 579999999753 26899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCch---------hHHHHHHHhcCcccccccccccc---------hhhhhh
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN---------AAAQAAASKLNISHATATLLDAD---------SELTLS 142 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 142 (431)
+++|+++.++.+++.++++.++++++|+++... +.+.............+.+.... ....+.
T Consensus 165 v~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 244 (655)
T PRK03584 165 IWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPGALLWE 244 (655)
T ss_pred EEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccccccCCcccHH
Confidence 999999999999999999999999999987532 22222222211111111111000 000111
Q ss_pred hccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHH-HHHHHHHHhcCCCCCeEEEecChhhHHHHHHHH
Q 014065 143 LAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAA-SVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGL 221 (431)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 221 (431)
..................+++++++|||||||.||+|+++|.+++. .+......+++.++|++++..++.|.+.. .+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~ 322 (655)
T PRK03584 245 DFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMWN--WL 322 (655)
T ss_pred HHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhHH--HH
Confidence 1000001111122334568999999999999999999999998754 45556667789999999999998887543 36
Q ss_pred HHHHhcCCEEEeCCCC--CCChhhHHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCCcHHHHHH
Q 014065 222 LSSFAAGAAVTLPAAG--RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVILSR 298 (431)
Q Consensus 222 ~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~~~~ 298 (431)
+.+|..|+++++.++. .+++..+++.++++++|++..+|++++.+.+.... ....+++++|.++++|++++++++++
T Consensus 323 ~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~ 402 (655)
T PRK03584 323 VSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDW 402 (655)
T ss_pred HHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHH
Confidence 7899999999987532 34789999999999999999999999998764321 12345789999999999999999999
Q ss_pred HHHHh--CCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCC--cccccc
Q 014065 299 LEEAF--GAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGP--NVTKGY 373 (431)
Q Consensus 299 ~~~~~--~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~--~~~~gy 373 (431)
+.+.+ ++.+.+.||+||++..+.... ......++++|.|. |++++|+|++|+++ .|+.|||++++| +++.||
T Consensus 403 ~~~~~~~~~~~~~~yG~TE~~~~~~~~~--~~~~~~~g~~g~p~~g~~~~ivd~~g~~~-~g~~GeL~v~gp~p~~~~gy 479 (655)
T PRK03584 403 VYEHVKADVWLASISGGTDICSCFVGGN--PLLPVYRGEIQCRGLGMAVEAWDEDGRPV-VGEVGELVCTKPFPSMPLGF 479 (655)
T ss_pred HHHHhCCCceEEeccChHhhhcccccCC--CCCCcCCCccCCCcCCceeEEECCCCCCC-CCCceEEEEccCCCCCccee
Confidence 99988 478999999999865443321 11234568899998 89999999999999 789999999996 789999
Q ss_pred ccCcchhh--hcc---cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 374 KNNPEANK--SAF---LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 374 ~~~~~~~~--~~~---~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+++++.++ ..+ .+|||+|||+|++|+||+++++||.||+||++|++|+|.|||.+.
T Consensus 480 ~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l 540 (655)
T PRK03584 480 WNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQV 540 (655)
T ss_pred eCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHH
Confidence 99887543 222 258999999999999999999999999999999999999999864
No 70
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-59 Score=536.92 Aligned_cols=408 Identities=22% Similarity=0.336 Sum_probs=349.0
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.++|+++++++|+++|+++.+ +++||+||+++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~~~-~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~ 3172 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVFGD-QQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAY 3172 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEeeCC-cccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEe
Confidence 3589999999999999999999865 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|++|.++.+++.++++.+++++++++....+...... ....+.+... ... ......+.....+++
T Consensus 3173 vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~-----~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~~ 3238 (3956)
T PRK12467 3173 VPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPA-----GDTALTLDRL----DLN-----GYSENNPSTRVMGEN 3238 (3956)
T ss_pred ecCCCCChHHHHHHHHhCCCCcEEEechhhhhhccccc-----CCceeeecch----hhc-----ccCCCCCcccCCCCc
Confidence 99999999999999999999999999876433221100 0001101000 000 111112223456789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAS 242 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 242 (431)
+++++|||||||.||||+++|+++.+.+......+++.++++++...|++|..+... ++.+|..|+++++++...+++.
T Consensus 3239 ~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~~G~~l~i~~~~~~~~~ 3317 (3956)
T PRK12467 3239 LAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQER-FLWTLICGGCLVVRDNDLWDPE 3317 (3956)
T ss_pred eEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHH-HHHHHhCCCEEEECCcccCCHH
Confidence 999999999999999999999999999999999999999999999999999988766 8999999999999884347999
Q ss_pred hHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCccc
Q 014065 243 TFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLMS 321 (431)
Q Consensus 243 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~ 321 (431)
.+++.|+++++|++.++|++++.+++... ..+++++|.+++|||+++++..+.+.+.+ ++.++|.||+||++..++
T Consensus 3318 ~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~---~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~ 3394 (3956)
T PRK12467 3318 ELWQAIHAHRISIACFPPAYLQQFAEDAG---GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVT 3394 (3956)
T ss_pred HHHHHHHHcCCEEEEcCHHHHHHHHhccc---ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeE
Confidence 99999999999999999999999876532 23478899999999999999999999887 678999999999997766
Q ss_pred CCCCCCCC--CCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccC--------Ccee
Q 014065 322 SNPLPEDG--PHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF--------GWFH 390 (431)
Q Consensus 322 ~~~~~~~~--~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~--------g~~~ 390 (431)
......+. .....++|+|+ |++++|+|+++++++.|+.|||+|+|+++++||+++++.+++.|.. +||+
T Consensus 3395 ~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yr 3474 (3956)
T PRK12467 3395 LWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYR 3474 (3956)
T ss_pred EEecccccccCCCCCCCccccCCCEEEEECCCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeec
Confidence 54332111 23346899999 8999999999999999999999999999999999999999998842 3799
Q ss_pred cCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 391 TGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 391 TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|||+|++++||.++++||+||+||++|++|+|.|||.+.
T Consensus 3475 TGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l 3513 (3956)
T PRK12467 3475 TGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARL 3513 (3956)
T ss_pred cchhheecCCCcEEEeccccceEeeceEeecHHHHHHHH
Confidence 999999999999999999999999999999999999864
No 71
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-58 Score=452.61 Aligned_cols=419 Identities=27% Similarity=0.354 Sum_probs=337.6
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
.++.++|++.++.+|+++|++. +++++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 10 ~~l~~~l~~~a~~~p~~~a~~~-~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v 88 (540)
T PRK06164 10 DTLASLLDAHARARPDAVALID-EDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVI 88 (540)
T ss_pred CCHHHHHHHHHHhCCCCeEEec-CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEE
Confidence 5799999999999999999985 447999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhH-HHHHHHhcC----c-ccccccccccchhhhh----h---hcccccc-
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA-AQAAASKLN----I-SHATATLLDADSELTL----S---LAHSESD- 149 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~----~-~~~~~~~~~~~~~~~~----~---~~~~~~~- 149 (431)
|+++..+.+++.++++.+++++++++.+.... ......... . ....+...+....... . .......
T Consensus 89 ~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (540)
T PRK06164 89 AVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQLFALPDPA 168 (540)
T ss_pred ecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCcccccccccccccC
Confidence 99999999999999999999999998764321 111111000 0 0001111100000000 0 0000000
Q ss_pred -ccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcC
Q 014065 150 -TNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAG 228 (431)
Q Consensus 150 -~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G 228 (431)
...........+++++++|||||||.||+|.++|.++..+.......+++.++++++..+|++|.+++.. ++.++..|
T Consensus 169 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l~~G 247 (540)
T PRK06164 169 PPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGFST-LLGALAGG 247 (540)
T ss_pred CcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHH-HHHHHhcC
Confidence 0000112234688999999999999999999999999999888888889999999999999999999975 89999999
Q ss_pred CEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEecc-CCCcHHHHHHHHHHhCCce
Q 014065 229 AAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCS-ASLAPVILSRLEEAFGAPV 307 (431)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g-~~~~~~~~~~~~~~~~~~i 307 (431)
+++++.+ .+++..+++.++++++|+++++|+++..+.+... ...++++++.+..+| .+...+..+++.+. ++++
T Consensus 248 ~~~~~~~--~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~ 322 (540)
T PRK06164 248 APLVCEP--VFDAARTARALRRHRVTHTFGNDEMLRRILDTAG--ERADFPSARLFGFASFAPALGELAALARAR-GVPL 322 (540)
T ss_pred ceEEecC--CCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhc--ccCCCcceeeeeeccCCcchHHHHHHHhhc-CCce
Confidence 9999887 6889999999999999999999999999988722 234578888876665 55566666666654 8999
Q ss_pred ecccCcccccCcccCCCCCCCCCCCCCCccccc--cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhcc
Q 014065 308 LEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV--GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF 384 (431)
Q Consensus 308 ~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 384 (431)
++.||+||++.+++.............+.|.|. ++.++++| +++++++.|+.||||++|++++.||+++++.++..|
T Consensus 323 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~ 402 (540)
T PRK06164 323 TGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDNPDATARAL 402 (540)
T ss_pred ecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccCCchhhhhcc
Confidence 999999999987666543333334445678876 58999999 568999999999999999999999999999998887
Q ss_pred c-CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 385 L-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 385 ~-~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
. +|||+|||+|++|++|.+++.||.+|+||++|++|+|.|||.+.
T Consensus 403 ~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l 448 (540)
T PRK06164 403 TDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHAL 448 (540)
T ss_pred cCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHH
Confidence 4 68999999999999999999999999999999999999999863
No 72
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.2e-58 Score=460.49 Aligned_cols=417 Identities=19% Similarity=0.190 Sum_probs=318.4
Q ss_pred cHHHHHHHHHHhcCCcceEEecCC----CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSGK----FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~~----~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
|+.+.+.+ ..++++|+++.+. +++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 88 n~~~~~~~---~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Ga 164 (652)
T TIGR01217 88 NYAENLLR---AAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGA 164 (652)
T ss_pred eHHHHHhc---cCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCe
Confidence 44554444 2578999887432 5899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCc---------hhHHHHHHHhcCcccccccccc-c---------chhhhh
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG---------NAAAQAAASKLNISHATATLLD-A---------DSELTL 141 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~ 141 (431)
+++|+++.++.+++.+++++++++++|+++.. .+.+.+...........+.+.. . .....+
T Consensus 165 v~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 244 (652)
T TIGR01217 165 IWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKIDGALDL 244 (652)
T ss_pred EEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcccccccccCcccH
Confidence 99999999999999999999999999998753 2333333332221111111110 0 000011
Q ss_pred hhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHH-HHHHHHHHhcCCCCCeEEEecChhhHHHHHHH
Q 014065 142 SLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAA-SVSNIKSVYKLTESDSTVIVLPLFHVHGMLAG 220 (431)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (431)
...................+++++++|||||||.||+|+++|.+++. ........+++.++|++++..|+.|.+.. .
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~ 322 (652)
T TIGR01217 245 EDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMWN--W 322 (652)
T ss_pred HHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhhH--H
Confidence 11000000111111234568999999999999999999999998654 44455566789999999999999987532 2
Q ss_pred HHHHHhcCCEEEeCCCCC--CChhhHHHHHHHhcceeeecchHHHHHHHhccc-CCCCCCCCCccEEEeccCCCcHHHHH
Q 014065 221 LLSSFAAGAAVTLPAAGR--FSASTFWQDMIKYNATWYTAVPTIHQIVLDRHV-AKPEPVYPKLRFIRSCSASLAPVILS 297 (431)
Q Consensus 221 ~~~~l~~G~~~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-~~~~~~~~~l~~i~~~g~~~~~~~~~ 297 (431)
++.+|..|+++++.++.. .++..+++.++++++|++...|.+++.+..... .....+++++|.+++||++++++.++
T Consensus 323 ~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~ 402 (652)
T TIGR01217 323 LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGFR 402 (652)
T ss_pred HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHHH
Confidence 568999999999876322 378899999999999999888877777654321 11234689999999999999999999
Q ss_pred HHHHHhC--CceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCC--ccccc
Q 014065 298 RLEEAFG--APVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGP--NVTKG 372 (431)
Q Consensus 298 ~~~~~~~--~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~--~~~~g 372 (431)
++.+.++ +.+.+.||+||++....... .......+++|.|. |.+++|+|++|+++ .|+.|||++++| +++.|
T Consensus 403 ~~~~~~~~~~~~~~~yG~TE~~~~~~~~~--~~~~~~~g~~g~p~~g~~v~ivd~~g~~~-~g~~GEl~v~gp~p~~~~g 479 (652)
T TIGR01217 403 WVYDEIKADVWLASISGGTDICSCFAGAN--PTLPVHIGEIQAPGLGTAVQSWDPEGKPV-TGEVGELVCTNPMPSMPIR 479 (652)
T ss_pred HHHHHhCCCceEEeccCHHHHhccccCCC--CCCCCcCCccCCCcCCCceEEECCCCCCC-CCCccEEEEecCCCccccc
Confidence 9998885 45678999999754333221 11234467889998 89999999999998 589999999996 68899
Q ss_pred cccCcchhh--hc-c--cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 373 YKNNPEANK--SA-F--LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 373 y~~~~~~~~--~~-~--~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+++++.++ +. | .+|||+|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 480 y~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l 541 (652)
T TIGR01217 480 FWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAV 541 (652)
T ss_pred eeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHH
Confidence 999987543 22 2 268999999999999999999999999999999999999999863
No 73
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-58 Score=448.90 Aligned_cols=397 Identities=25% Similarity=0.365 Sum_probs=331.4
Q ss_pred HHHHHhcCCcceEEec-CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCC
Q 014065 11 NQVIDQFSSKRALSVS-GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAY 89 (431)
Q Consensus 11 ~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 89 (431)
+.+++.+|+++|+.+. +++++||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.+
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 4577889999999863 457999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCeEEEEec
Q 014065 90 TPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHT 169 (431)
Q Consensus 90 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 169 (431)
+.+++.++++.++++++|+++...... . ....+. .. ..... ............+++++++||
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~~--------~--~~~~~~----~~-~~~~~---~~~~~~~~~~~~~~~~~i~~T 143 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAGR--------T--DVEDLA----AF-IASAD---ALEPADTPSIPPERVSLILFT 143 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhccc--------c--cccchh----hh-hhhcc---ccccccCCCCCCCCceEEEeC
Confidence 999999999999999999987533210 0 000000 00 00000 000111123356789999999
Q ss_pred cCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHH
Q 014065 170 SGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMI 249 (431)
Q Consensus 170 SGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~ 249 (431)
|||||.||+|.++|.++...+..+........++++++.+|++|.+++...+..++..|+++++.+ .+++..++..+.
T Consensus 144 SGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~--~~~~~~~~~~~~ 221 (488)
T PRK09088 144 SGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSN--GFEPKRTLGRLG 221 (488)
T ss_pred CCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcC--CCCHHHHHHHHH
Confidence 999999999999999998887777777778899999999999999999888888999999999876 678888888886
Q ss_pred H--hcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCC
Q 014065 250 K--YNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPE 327 (431)
Q Consensus 250 ~--~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~ 327 (431)
+ +++|.++.+|++++.+.+..... ...++++|.+++||++++.+..+.+.+. ++++++.||+||++..........
T Consensus 222 ~~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~l~~~~~gG~~~~~~~~~~~~~~-g~~v~~~YG~TE~~~~~~~~~~~~ 299 (488)
T PRK09088 222 DPALGITHYFCVPQMAQAFRAQPGFD-AAALRHLTALFTGGAPHAAEDILGWLDD-GIPMVDGFGMSEAGTVFGMSVDCD 299 (488)
T ss_pred hhccCCcEEeeHHHHHHHHHhCcCcC-ccccccceEEEecCCCCCHHHHHHHHHh-CCceeeeecccccccccccCCCcc
Confidence 4 78999999999999987654322 2346899999999999999988887754 899999999999987654332222
Q ss_pred CCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc-CCceecCceEEEcCCCeEEE
Q 014065 328 DGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL-FGWFHTGDIGYFDSDGYLHL 405 (431)
Q Consensus 328 ~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~ 405 (431)
.....++++|+|. +++++|+|+++++++.|+.|||+++|++++.||+++++.+++.+. +|||+|||+|++|++|.+++
T Consensus 300 ~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i 379 (488)
T PRK09088 300 VIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWV 379 (488)
T ss_pred cccccCCccccCCCCcEEEEECCCCCCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEE
Confidence 2234567899999 799999999999999999999999999999999999988887774 79999999999999999999
Q ss_pred ecccccceecCCeeccccceeccc
Q 014065 406 VGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 406 ~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.||.+|+|+.+|.+|+|.+||.+.
T Consensus 380 ~GR~~d~i~~~G~~i~~~~iE~~l 403 (488)
T PRK09088 380 VDRKKDMFISGGENVYPAEIEAVL 403 (488)
T ss_pred eccccceEEeCCEEECHHHHHHHH
Confidence 999999999999999999999853
No 74
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=3.2e-58 Score=449.03 Aligned_cols=415 Identities=26% Similarity=0.337 Sum_probs=344.8
Q ss_pred cHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEe
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAP 84 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 84 (431)
++.++|+..++++|+++|+.+.+ +++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++|++++|
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~-~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 79 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHD-RTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVP 79 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECC-ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEe
Confidence 47899999999999999999765 69999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc-------hhhhhhhccccccccccccCC
Q 014065 85 LNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD-------SELTLSLAHSESDTNAISKLT 157 (431)
Q Consensus 85 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 157 (431)
+++..+.+++..+++.+++++++++.+..+.+.............+.+.+.. ....+....... .......
T Consensus 80 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 157 (515)
T TIGR03098 80 INPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALG--DADPPHP 157 (515)
T ss_pred CCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhccc--cccccCC
Confidence 9999999999999999999999998876554443332211111111111110 000111111000 0111223
Q ss_pred CCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC
Q 014065 158 NDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG 237 (431)
Q Consensus 158 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~ 237 (431)
...+++++++|||||||.||+|.++|.++..++......+++..+++++..+|++|.+++.. ++.++..|+++++.+
T Consensus 158 ~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~-- 234 (515)
T TIGR03098 158 VIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQ-LTTAFYVGATVVLHD-- 234 (515)
T ss_pred CCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHH-HHHHHHcCCEEEEcC--
Confidence 34578999999999999999999999999988888888888999999999999999999875 889999999999986
Q ss_pred CCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccc
Q 014065 238 RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEA 316 (431)
Q Consensus 238 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~ 316 (431)
.+++..+++.++++++|++.++|+++..+.+.... ..+++++|.++++|+++++++.+.+++.+ ++.+++.||+||+
T Consensus 235 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 312 (515)
T TIGR03098 235 YLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWP--ESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEA 312 (515)
T ss_pred CCCHHHHHHHHHHcCCceEecChHHHHHHHhcccC--CCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccc
Confidence 67899999999999999999999999998765322 23467999999999999999999999988 7889999999998
Q ss_pred cCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc----------
Q 014065 317 THLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL---------- 385 (431)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~---------- 385 (431)
+....... ......++++|+|+ +++++++|+++++++.|+.|||+++|+.++.||+++++.+...|.
T Consensus 313 ~~~~~~~~--~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~ 390 (515)
T TIGR03098 313 FRSTYLPP--EEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELH 390 (515)
T ss_pred cceEeccc--ccccCCCCCcceecCCCEEEEECCCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCcccccc
Confidence 76544322 22245678999999 899999999999999999999999999999999998887765543
Q ss_pred --CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 386 --FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 386 --~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
++|++|||+|++|++|++++.||.+|+|+.+|.+|+|.|||.+-
T Consensus 391 ~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l 436 (515)
T TIGR03098 391 LPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVA 436 (515)
T ss_pred ccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHH
Confidence 24899999999999999999999999999999999999999753
No 75
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=3.8e-58 Score=447.13 Aligned_cols=416 Identities=24% Similarity=0.348 Sum_probs=343.7
Q ss_pred HHHHHHHH-HHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEe
Q 014065 6 LIGLLNQV-IDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAP 84 (431)
Q Consensus 6 l~~~l~~~-a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 84 (431)
-.++++++ ++.+||++|++..+ ..+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|
T Consensus 6 ~~~~~~~~~~~~~p~~~a~~~~~-~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~ 84 (508)
T TIGR02262 6 AEDLLDRNVVEGRGGKTAFIDDI-SSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVA 84 (508)
T ss_pred HHHHHHHHHhcccCCceEEEeCC-ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEee
Confidence 34566665 67799999998654 79999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccccc-chhhhhhhccccccccccccCCCCCCCe
Q 014065 85 LNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA-DSELTLSLAHSESDTNAISKLTNDPSDV 163 (431)
Q Consensus 85 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (431)
+++..+.+++.++++.++++.++++.+..+.+.+...........+..... .....+..... ............++++
T Consensus 85 l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 163 (508)
T TIGR02262 85 LNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLA-TESEQFKPAATQADDP 163 (508)
T ss_pred ccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhh-cCCCccCCCCCCCCCc
Confidence 999999999999999999999999987666555443322211111111110 00001110000 0011112233456899
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHH-HHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChh
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSN-IKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAS 242 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 242 (431)
++++|||||||.||+|.++|.++...+.. ....++++++++++..+|++|.+++...++.++..|+++++.+. .+++.
T Consensus 164 a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~ 242 (508)
T TIGR02262 164 AFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGE-RPTPD 242 (508)
T ss_pred EEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCC-CCCHH
Confidence 99999999999999999999999877665 45666889999999999999999998778889999999988764 46899
Q ss_pred hHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccC
Q 014065 243 TFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSS 322 (431)
Q Consensus 243 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~ 322 (431)
.+++.|++++++.+.++|.++..++...... .....++|.++++|+++++++.+.|.+.+++++++.||+||++.+...
T Consensus 243 ~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~-~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~ 321 (508)
T TIGR02262 243 AVFDRLRRHQPTIFYGVPTLYAAMLADPNLP-AEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTEMLHIFLS 321 (508)
T ss_pred HHHHHHHHHCCcEEecchHHHHHHhcCcccc-ccccccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccccCceeec
Confidence 9999999999999999999998887654322 223578999999999999999999999999999999999999976554
Q ss_pred CCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCC
Q 014065 323 NPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDG 401 (431)
Q Consensus 323 ~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g 401 (431)
+.. .....+++|+|+ +..++++|+++.+++.|+.|||+++|+.++.||+++++.++..|.++||+|||+++++++|
T Consensus 322 ~~~---~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~~g 398 (508)
T TIGR02262 322 NLP---GDVRYGTSGKPVPGYRLRLVGDGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRNDDG 398 (508)
T ss_pred CCc---cCCCCCCcCCCCCCcEEEEECCCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEcCCc
Confidence 432 223457899998 8999999999999999999999999999999999999999888889999999999999999
Q ss_pred eEEEecccccceecCCeeccccceecc
Q 014065 402 YLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 402 ~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
.+++.||.+|+|+.+|.+++|.+||.+
T Consensus 399 ~~~~~gR~~d~i~~~G~~v~~~~ie~~ 425 (508)
T TIGR02262 399 SYTYAGRTDDMLKVSGIYVSPFEIESA 425 (508)
T ss_pred cEEEeccccceeeeCCEEECHHHHHHH
Confidence 999999999999999999999999986
No 76
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-58 Score=448.67 Aligned_cols=400 Identities=25% Similarity=0.344 Sum_probs=331.8
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.+.|.+.++.+|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 34 ~~~~~~~~~~~a~~~p~~~a~~~~~-~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 34 GTNPYTLLAVTAARWPGRTAIIDDD-GALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred CCcHHHHHHHHHHHCCCCcEEEeCC-CcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 4688999999999999999998754 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|+++.++.+++.++++.++++.++++++..+....... ....+... . .... . . ...+...++
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~------~~~~~~~~-~---~~~~---~-~---~~~p~~~~~ 175 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADD------AVAVIDPA-T---AGAE---E-S---GGRPAVAAP 175 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhc------ceEEeccc-h---hhhh---c-C---CCCCCCCCC
Confidence 999999999999999999999999998875544332211 11111100 0 0000 0 0 001122355
Q ss_pred eEEEEeccCCCCCCCeeeechHHHH--HHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCC
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLA--ASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFS 240 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~ 240 (431)
.++++|||||||.||+|.++|.... ..........++.++++++..+|++|.+++.. ++.++..|+++++.. .++
T Consensus 176 ~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~-~~~~l~~G~~~~~~~--~~~ 252 (516)
T PRK13383 176 GRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGM-LMLTIALGGTVLTHR--HFD 252 (516)
T ss_pred CcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHH-HHHHHhcCCEEEECC--CCC
Confidence 6789999999999999999997432 11222344567888999999999999999876 778899999998876 689
Q ss_pred hhhHHHHHHHhcceeeecchHHHHHHHhcccCC-CCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCc
Q 014065 241 ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHL 319 (431)
Q Consensus 241 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~ 319 (431)
+..+++.+++++++.+.++|+++..+.+..... ....++++|.+++||+++++++.+++.+.++..+++.||+||++..
T Consensus 253 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE~~~~ 332 (516)
T PRK13383 253 AEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTEVGIG 332 (516)
T ss_pred HHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcCchhhhcccccccccc
Confidence 999999999999999999999999998764321 1234689999999999999999999999999999999999999866
Q ss_pred ccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEc
Q 014065 320 MSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFD 398 (431)
Q Consensus 320 ~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~ 398 (431)
...... ......+++|+|+ +++++|+|++|++++.|+.|||+++|+.++.||++.+. ..+.+|||+|||+|++|
T Consensus 333 ~~~~~~--~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~---~~~~~g~~~TGDl~~~d 407 (516)
T PRK13383 333 ALATPA--DLRDAPETVGKPVAGCPVRILDRNNRPVGPRVTGRIFVGGELAGTRYTDGGG---KAVVDGMTSTGDMGYLD 407 (516)
T ss_pred eecccc--ccccCCCcccCCCCCcEEEEECCCCCCCCCCCceEEEEecCcccccccCCch---hheecCceecceeEEEc
Confidence 554331 2234567899999 89999999999999999999999999999999997653 34568999999999999
Q ss_pred CCCeEEEecccccceecCCeeccccceecc
Q 014065 399 SDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 399 ~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
++|++++.||.+|+||++|++|+|.+||.+
T Consensus 408 ~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~ 437 (516)
T PRK13383 408 NAGRLFIVGREDDMIISGGENVYPRAVENA 437 (516)
T ss_pred CCccEEEeccccceEEECCEEECHHHHHHH
Confidence 999999999999999999999999999975
No 77
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=6e-59 Score=453.43 Aligned_cols=401 Identities=23% Similarity=0.279 Sum_probs=314.4
Q ss_pred HHHHHHHHHHhcCCcceEEecCC---CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 6 LIGLLNQVIDQFSSKRALSVSGK---FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 6 l~~~l~~~a~~~p~~~a~~~~~~---~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
+.+.|++.++++|+++|+++.++ +++||+||.++++++|++|.++ ++||+|+++++|++++++++|||+++|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~ 81 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAV 81 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCC
Confidence 88999999999999999987652 6899999999999999999988 799999999999999999999999999986
Q ss_pred EecCCC-------CCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhcccccccccccc
Q 014065 83 APLNAA-------YTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISK 155 (431)
Q Consensus 83 v~l~~~-------~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (431)
++++.. ...+++.++++.++++++|++............. +...+... . ... ... ...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-------~~~~~~~~---~--~~~-~~~--~~~ 146 (525)
T PRK05851 82 SILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS-------VTVHDLAT---A--AHT-NRS--ASL 146 (525)
T ss_pred cCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc-------cccccccc---c--ccc-ccc--ccC
Confidence 543211 1234566778999999999987654333222110 00000000 0 000 000 001
Q ss_pred CCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCC-CCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC
Q 014065 156 LTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLT-ESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234 (431)
Q Consensus 156 ~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 234 (431)
....++++++++|||||||.||+|.++|.++...+......+++. ++|+++..+|++|.+++.. ++.++..|+++++.
T Consensus 147 ~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~~~~l~~G~~~~~~ 225 (525)
T PRK05851 147 TPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLAF-LLTAALAGAPLWLA 225 (525)
T ss_pred CCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHHH-HHHHHHcCCeEEEc
Confidence 124578999999999999999999999999999988888888888 8999999999999999976 78899999999987
Q ss_pred CCCCC--ChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHH---hCC---c
Q 014065 235 AAGRF--SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEA---FGA---P 306 (431)
Q Consensus 235 ~~~~~--~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~---~~~---~ 306 (431)
+...+ ++..+++.+.++++|.+...|..+..+.+........+++++|.+++||+++++++.+++.+. +|. .
T Consensus 226 ~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~ 305 (525)
T PRK05851 226 PTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGA 305 (525)
T ss_pred CHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhh
Confidence 63223 577899999999999886555555554433322223447899999999999999999998875 354 4
Q ss_pred eecccCcccccCcccCCCCCC----------C--CCCCCCCccccc-cceEEEECCCC-CcCCCCceeeEEEeCCccccc
Q 014065 307 VLEAYAMTEATHLMSSNPLPE----------D--GPHKPGSVGRPV-GQEIAILDEIG-VPQEGGAKGEVCIRGPNVTKG 372 (431)
Q Consensus 307 i~~~yg~tE~~~~~~~~~~~~----------~--~~~~~~~~G~~~-~~~~~i~d~~~-~~~~~~~~Gel~v~~~~~~~g 372 (431)
+++.||+||++..+....... + .....+++|+|+ |++++|+|+++ .+++.|+.|||+++|++++.|
T Consensus 306 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~G 385 (525)
T PRK05851 306 AAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSG 385 (525)
T ss_pred cccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhc
Confidence 999999999986655432110 0 112346899999 89999999775 468999999999999999999
Q ss_pred cccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 373 YKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 373 y~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+++++.+ .+|||+|||+|+++ +|+++++||+||+||++|++|+|.|||.+.
T Consensus 386 Y~~~~~~~----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l 437 (525)
T PRK05851 386 YLGQAPID----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVA 437 (525)
T ss_pred cccCCccC----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHH
Confidence 99987643 36899999999996 799999999999999999999999999864
No 78
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=4.8e-58 Score=448.48 Aligned_cols=418 Identities=24% Similarity=0.360 Sum_probs=340.2
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
+.++.++|+++++ |+++|+++.+ +++||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 24 ~~~~~~~~~~~a~--p~~~a~~~~~-~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~ 100 (536)
T PRK10946 24 DLPLTDILTRHAA--SDAIAVICGE-RQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAP 100 (536)
T ss_pred CccHHHHHHHhhC--CCCeEEEeCC-CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEE
Confidence 4688999988887 9999999754 799999999999999999999999999999999999999999999999999988
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCch-----hHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGN-----AAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLT 157 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (431)
+++.+.....++..+++.++++.++++.... .....+........... .........+....... ........
T Consensus 101 v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 178 (536)
T PRK10946 101 VNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVL-LLNDDGEHSLDDAINHP-AEDFTATP 178 (536)
T ss_pred ecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEE-EecCCCCccHHHHhhCc-ccccccCC
Confidence 8777777788899999999999999986531 11222222111111111 11110000011000000 01111233
Q ss_pred CCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHH-HHHHHHhcCCEEEeCCC
Q 014065 158 NDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLA-GLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 158 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~l~~G~~~~~~~~ 236 (431)
..++++++++|||||||.||+|.++|.++...+......+++.+++++++.+|++|.+++.. .++.++..|+++++.+
T Consensus 179 ~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~- 257 (536)
T PRK10946 179 SPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAP- 257 (536)
T ss_pred CCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECC-
Confidence 45789999999999999999999999999999888888889999999999999999888764 4788899999999876
Q ss_pred CCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCC-CCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCccc
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTE 315 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE 315 (431)
.+++..+++.+++++++++.++|..+..+++..... ....++++|.+++||+++++++.+.+.+.+++++++.||+||
T Consensus 258 -~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g~~~~~~YG~tE 336 (536)
T PRK10946 258 -DPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAELGCQLQQVFGMAE 336 (536)
T ss_pred -CCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhcCCeEEEeecccc
Confidence 678999999999999999999999999998763221 223468999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCCCCCCccccc--cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cCCceecC
Q 014065 316 ATHLMSSNPLPEDGPHKPGSVGRPV--GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFHTG 392 (431)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TG 392 (431)
++...... .........++|+|+ +..++++|++|++++.|+.|||+++|+.++.||+++++.+...| .++||+||
T Consensus 337 ~~~~~~~~--~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TG 414 (536)
T PRK10946 337 GLVNYTRL--DDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSG 414 (536)
T ss_pred cceeeecC--CCccccccccCCcccCCCceEEEECCCCCCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecC
Confidence 65433221 112234567899997 48999999999999999999999999999999999999988888 47999999
Q ss_pred ceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 393 DIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 393 D~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+|++|++|++++.||.+|+||++|++++|.|||.+.
T Consensus 415 Dl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l 451 (536)
T PRK10946 415 DLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLL 451 (536)
T ss_pred ceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHH
Confidence 9999999999999999999999999999999999863
No 79
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.5e-58 Score=447.41 Aligned_cols=406 Identities=25% Similarity=0.347 Sum_probs=329.4
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGI-NAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
..|+.++|.+++ .|+++|+++.+ .++||.||.++++++|.+|.+.|+ .+||+|+++++|+++++++++||+++|++
T Consensus 2 ~~~~~~~l~~~~--~p~~~Al~~~~-~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~ 78 (540)
T PRK13388 2 RDTIAQLLRDRA--GDDTIAVRYGD-RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYV 78 (540)
T ss_pred chhHHHHHHhhc--cCCceEEEECC-ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCE
Confidence 467889998765 69999998755 699999999999999999999999 89999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPS 161 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (431)
++|++|.++.+++.++++.++++++|++++....+.... .... ..+.+.... +..... ......+.....++
T Consensus 79 ~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~--~~i~~~~~~----~~~~~~-~~~~~~~~~~~~~~ 150 (540)
T PRK13388 79 LVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD-LPGV--RVLDVDTPA----YAELVA-AAGALTPHREVDAM 150 (540)
T ss_pred EEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc-ccCc--eEEEccchh----hhhhhc-cccCcCCCCCCCCC
Confidence 999999999999999999999999999877654433321 0011 111111100 000000 00011111235679
Q ss_pred CeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCCh
Q 014065 162 DVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSA 241 (431)
Q Consensus 162 ~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~ 241 (431)
++++++|||||||.||+|.++|.++..........+++..+|+++..+|++|.+++...++.++..|+++++.+ .+++
T Consensus 151 ~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~--~~~~ 228 (540)
T PRK13388 151 DPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPA--KFSA 228 (540)
T ss_pred CeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECC--CCCH
Confidence 99999999999999999999999999888888888899999999999999999998876777899999999876 6789
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCccc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMS 321 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~ 321 (431)
..+++.+++++++++..+|+.+..++...... .....+++. ..|++++++....+.+.+++++++.||+||++.++.
T Consensus 229 ~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~-~~~~~~l~~--~~G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~ 305 (540)
T PRK13388 229 SGFLDDVRRYGATYFNYVGKPLAYILATPERP-DDADNPLRV--AFGNEASPRDIAEFSRRFGCQVEDGYGSSEGAVIVV 305 (540)
T ss_pred HHHHHHHHHhCCeEEEehHHHHHHHHhCCCCc-cccccceEE--EECCCCCHHHHHHHHHHhCCceecccccccccceee
Confidence 99999999999999999999999988664322 122345553 336677888899999889999999999999987665
Q ss_pred CCCCCCCCCCCCCCccccc-cceE-----------EEECCCCCcC-CCCceeeEEEe-CCccccccccCcchhhhcccCC
Q 014065 322 SNPLPEDGPHKPGSVGRPV-GQEI-----------AILDEIGVPQ-EGGAKGEVCIR-GPNVTKGYKNNPEANKSAFLFG 387 (431)
Q Consensus 322 ~~~~~~~~~~~~~~~G~~~-~~~~-----------~i~d~~~~~~-~~~~~Gel~v~-~~~~~~gy~~~~~~~~~~~~~g 387 (431)
... ....+++|+|+ ++++ .++|++|+.+ +.++.|||+++ |++++.||+++++.+.+.|.+|
T Consensus 306 ~~~-----~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g 380 (540)
T PRK13388 306 REP-----GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERMRHG 380 (540)
T ss_pred cCC-----CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccccCCCcceEEEEecCCcccccccCChHHHHHHhhcC
Confidence 432 23457899998 6554 2455556655 34678999998 9999999999999998888899
Q ss_pred ceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 388 WFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 388 ~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+|||+|++|+||++++.||.+|+||++|++|+|.|||.+.
T Consensus 381 ~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l 422 (540)
T PRK13388 381 MYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERIL 422 (540)
T ss_pred ceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHH
Confidence 999999999999999999999999999999999999999863
No 80
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-57 Score=448.48 Aligned_cols=422 Identities=28% Similarity=0.393 Sum_probs=343.0
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.++|+++++.+|+++|+.+.+ +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 32 ~~~l~~~l~~~a~~~p~~~al~~~~-~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 110 (567)
T PRK06178 32 ERPLTEYLRAWARERPQRPAIIFYG-HVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVH 110 (567)
T ss_pred cccHHHHHHHHHHHCCCceEEEECC-ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEE
Confidence 4689999999999999999998755 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccc-cc---cchhhhh---------------hh
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATL-LD---ADSELTL---------------SL 143 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~---------------~~ 143 (431)
+|++|..+.+++.++++.++++++++++...+.+................ .+ ....... ..
T Consensus 111 v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (567)
T PRK06178 111 VPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAIDL 190 (567)
T ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEeccccccccccccccccccccccccccccccH
Confidence 99999999999999999999999999988766655443322211111000 00 0000000 00
Q ss_pred c-cccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH-HhcCCCCCeEEEecChhhHHHHHHHH
Q 014065 144 A-HSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS-VYKLTESDSTVIVLPLFHVHGMLAGL 221 (431)
Q Consensus 144 ~-~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~ 221 (431)
. ................+++++++|||||||.||+|.++|.++......... .....++++++..+|++|.+|+...+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~ 270 (567)
T PRK06178 191 LPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIAGENFGL 270 (567)
T ss_pred HHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHHHHHHHHH
Confidence 0 000000111123355789999999999999999999999998876554433 35678899999999999999988778
Q ss_pred HHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEec--cCCCcHHHHHHH
Q 014065 222 LSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSC--SASLAPVILSRL 299 (431)
Q Consensus 222 ~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~--g~~~~~~~~~~~ 299 (431)
+.++..|+++++.+ .+++..+++.+++++++.+..+|..+..+...... ...++++++.+..+ ++.++++..+.+
T Consensus 271 ~~~l~~G~~~~l~~--~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~-~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 347 (567)
T PRK06178 271 LFPLFSGATLVLLA--RWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRF-AEYDLSSLRQVRVVSFVKKLNPDYRQRW 347 (567)
T ss_pred HHHHHcCceEEEeC--CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCC-CCCCcchheeeeeccccccCCHHHHHHH
Confidence 99999999999987 67999999999999999999999999988765432 23346778876543 589999999999
Q ss_pred HHHhCCcee-cccCcccccCcccCCCCCC----CCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccc
Q 014065 300 EEAFGAPVL-EAYAMTEATHLMSSNPLPE----DGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKG 372 (431)
Q Consensus 300 ~~~~~~~i~-~~yg~tE~~~~~~~~~~~~----~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~g 372 (431)
++.++..++ +.||+||++..+....... +....++++|+|+ |++++++| +++++++.|+.|||+++|++++.|
T Consensus 348 ~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~~g 427 (567)
T PRK06178 348 RALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRTPSLLKG 427 (567)
T ss_pred HHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEECCccccc
Confidence 998887766 4799999886654432111 1123457799999 89999999 669999999999999999999999
Q ss_pred cccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 373 YKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 373 y~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
|+++++.+...+.+|||+|||+++++++|++++.||.+|+|+.+|++|+|.|||.+
T Consensus 428 Y~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~ 483 (567)
T PRK06178 428 YWNKPEATAEALRDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEAL 483 (567)
T ss_pred ccCChhhhhhcccCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHH
Confidence 99999999888889999999999999999999999999999999999999999986
No 81
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.8e-57 Score=447.39 Aligned_cols=420 Identities=27% Similarity=0.418 Sum_probs=340.1
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLV-AAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~-~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
.++.++|...++.+|+++|++..+ +++||+||.++++++|+.|+ +.|+++||+|+++++|+++++++++||+++|+++
T Consensus 25 ~~~~~~l~~~~~~~~~~~a~~~~~-~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 103 (560)
T PRK08751 25 RTVAEVFATSVAKFADRPAYHSFG-KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTV 103 (560)
T ss_pred CcHHHHHHHHHHhCCCCceEEECC-ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 578999999999999999998754 79999999999999999997 5899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccc-cccc-------------------------c
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATAT-LLDA-------------------------D 136 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------------------~ 136 (431)
+|++|..+.+++.++++.++++++++++.....+............... ..+. .
T Consensus 104 v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (560)
T PRK08751 104 VNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYRIN 183 (560)
T ss_pred eccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhccccccCCC
Confidence 9999999999999999999999999988765554443332221111000 0000 0
Q ss_pred hhhhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhc----CCC-CCeEEEecCh
Q 014065 137 SELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYK----LTE-SDSTVIVLPL 211 (431)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~----~~~-~~~~~~~~p~ 211 (431)
....+..................++++++++|||||||.||+|.++|.++...+......++ +.+ +++++..+|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (560)
T PRK08751 184 GAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITALPL 263 (560)
T ss_pred ccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEecCh
Confidence 00000000000000011123346789999999999999999999999999877766555443 333 3567788999
Q ss_pred hhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCC
Q 014065 212 FHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASL 291 (431)
Q Consensus 212 ~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~ 291 (431)
+|.+++....+.++..|++.++... .+++..+++.++++++|++..+|.++..+.+.... ...+++++|.+++||+++
T Consensus 264 ~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~l~~lr~v~~gG~~~ 341 (560)
T PRK08751 264 YHIFALTANGLVFMKIGGCNHLISN-PRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGF-DQIDFSSLKMTLGGGMAV 341 (560)
T ss_pred HHHHHHHHhhhhHhhccceEEEecC-cCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCc-CCcchhhheeeeeCCCCC
Confidence 9999987766777777877766543 56899999999999999999999999999876533 234578999999999999
Q ss_pred cHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccc
Q 014065 292 APVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVT 370 (431)
Q Consensus 292 ~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~ 370 (431)
++.+.+.+++.+++.+++.||+||++..++.++. .....++++|.|+ ++.++++|++|++++.|+.|||+++|+.++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~--~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~Gel~v~~~~~~ 419 (560)
T PRK08751 342 QRSVAERWKQVTGLTLVEAYGLTETSPAACINPL--TLKEYNGSIGLPIPSTDACIKDDAGTVLAIGEIGELCIKGPQVM 419 (560)
T ss_pred CHHHHHHHHHHhCCeEEEeeccccCCCceecccc--cccccCCCcCccCCCceEEEECCCCCCCCCCCceEEEEecCccc
Confidence 9999999999889999999999999877665432 2234567899999 899999999999999999999999999999
Q ss_pred cccccCcchhhhcc-cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 371 KGYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 371 ~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
.||+++++.+.+.+ .+|||+|||+|++|++|++++.||.+|+|+++|++|+|.|||.+
T Consensus 420 ~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~ 478 (560)
T PRK08751 420 KGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDV 478 (560)
T ss_pred hhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHH
Confidence 99999998887777 46999999999999999999999999999999999999999976
No 82
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-57 Score=445.49 Aligned_cols=419 Identities=22% Similarity=0.319 Sum_probs=335.5
Q ss_pred ccHHHHHHHHHHhcCCcceEEec--C-CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVS--G-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~--~-~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
.++.++|++.++.+|++.++.+. + .+.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~ 89 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGA 89 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 45789999999999998888753 2 26899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc-------hhhhhhhcccccccccc
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD-------SELTLSLAHSESDTNAI 153 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 153 (431)
+++|++|..+.+++..+++.+++++++++.+..+...+...........+...+.. ....+....... ....
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~ 168 (539)
T PRK07008 90 VCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQ-DGDY 168 (539)
T ss_pred EEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhccc-CCCc
Confidence 99999999999999999999999999999877665554433322111111111000 000000000000 0111
Q ss_pred ccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHH--HHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEE
Q 014065 154 SKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVS--NIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAV 231 (431)
Q Consensus 154 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~ 231 (431)
......++++++++|||||||.||+|.++|.+++.+.. .....+++.++++++..+|++|..++.. .+.++..|+++
T Consensus 169 ~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~-~~~~l~~G~~~ 247 (539)
T PRK07008 169 DWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGL-PYSAPLTGAKL 247 (539)
T ss_pred CcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHH-HHHHHhcCceE
Confidence 12234567899999999999999999999999864432 2334667888999999999999877655 67788999999
Q ss_pred EeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceeccc
Q 014065 232 TLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAY 311 (431)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~y 311 (431)
++++. .+++..+++.++++++|++..+|+.+..+++..... ..+++++|.++++|+++++++.+.+.+.+++++++.|
T Consensus 248 ~~~~~-~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~-~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~Y 325 (539)
T PRK07008 248 VLPGP-DLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREA-GLRFSTLRRTVIGGSACPPAMIRTFEDEYGVEVIHAW 325 (539)
T ss_pred EEecC-CcCHHHHHHHHHHcCCEEEEechHHHHHHHhccccc-CCCcccceEEEEcCCCCCHHHHHHHHHHhCCceeccc
Confidence 98754 578999999999999999999999999998876543 3457899999999999999999999999999999999
Q ss_pred CcccccCcccCCCCCCC--------CCCCCCCccccc-cceEEEECCCCCcCCCC--ceeeEEEeCCccccccccCcchh
Q 014065 312 AMTEATHLMSSNPLPED--------GPHKPGSVGRPV-GQEIAILDEIGVPQEGG--AKGEVCIRGPNVTKGYKNNPEAN 380 (431)
Q Consensus 312 g~tE~~~~~~~~~~~~~--------~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~--~~Gel~v~~~~~~~gy~~~~~~~ 380 (431)
|+||++..+..+..... ......++|+|+ +++++|+|+++++++.+ +.|||+++|+.++.||++++.
T Consensus 326 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~-- 403 (539)
T PRK07008 326 GMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPWDGKAFGDLQVRGPWVIDRYFRGDA-- 403 (539)
T ss_pred ccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCCCCCcceEEEEeCCccchhhcCChh--
Confidence 99999876544321110 012246789999 89999999988888754 579999999999999999873
Q ss_pred hhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 381 KSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 381 ~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
..+.+|||+|||++++|+||++++.||.+|+||.+|++|+|.|||.+.
T Consensus 404 -~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l 451 (539)
T PRK07008 404 -SPLVDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVA 451 (539)
T ss_pred -hhhcCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHH
Confidence 345689999999999999999999999999999999999999999863
No 83
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-57 Score=441.54 Aligned_cols=404 Identities=23% Similarity=0.319 Sum_probs=332.3
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAA-GINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~-gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
.++.++|++.|. ++++++++.+ +++||+||.++++++|++|+++ |++++++|+++++|+++++++++||+++|+++
T Consensus 5 ~~~~~~l~~~a~--~~~~a~~~~~-~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~ 81 (529)
T PRK07867 5 PTVAELLLPLAE--DDDRGLYFED-SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVP 81 (529)
T ss_pred ccHHHHHHHhcc--cCCceEEECC-cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 488999988775 7899998755 7999999999999999999997 89999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|+++..+.+++.++++.++++++|++++......... .....+...... +..................+++
T Consensus 82 v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~ 153 (529)
T PRK07867 82 VGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD----PGVRVINVDSPA----WADELAAHRDAEPPFRVADPDD 153 (529)
T ss_pred EEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc----cCceEEEecccc----HHHHhcccCCCCCCcccCCccc
Confidence 99999999999999999999999999987655443321 011111111100 1100000011111223356789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAS 242 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 242 (431)
+++++|||||||.||+|.++|.++..+.......+++..+|+++..+|++|.+++...++.++..|+++++.+ .+++.
T Consensus 154 ~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~--~~~~~ 231 (529)
T PRK07867 154 LFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRR--KFSAS 231 (529)
T ss_pred eEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecC--CCCHH
Confidence 9999999999999999999999999888888888889999999999999999999887888999999999987 67899
Q ss_pred hHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccC
Q 014065 243 TFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSS 322 (431)
Q Consensus 243 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~ 322 (431)
.+++.++++++|++..+|+.+..++....... ...+++|. ++||+.+++. ..++.+.+++++++.||+||++.....
T Consensus 232 ~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~-~~~~~lr~-~~gg~~~~~~-~~~~~~~~g~~l~~~YG~TE~~~~~~~ 308 (529)
T PRK07867 232 GFLPDVRRYGATYANYVGKPLSYVLATPERPD-DADNPLRI-VYGNEGAPGD-IARFARRFGCVVVDGFGSTEGGVAITR 308 (529)
T ss_pred HHHHHHHHhCCeEEeccHHHHHHHHhCCCccc-ccccceEE-EecCCCChHH-HHHHHHHhCCcEEEeeccccccccccc
Confidence 99999999999999999999999877654221 22356774 5688887766 467777889999999999999866543
Q ss_pred CCCCCCCCCCCCCccccccceEEEEC-CCCCcCCCCc------------eeeEEE-eCCccccccccCcchhhhcccCCc
Q 014065 323 NPLPEDGPHKPGSVGRPVGQEIAILD-EIGVPQEGGA------------KGEVCI-RGPNVTKGYKNNPEANKSAFLFGW 388 (431)
Q Consensus 323 ~~~~~~~~~~~~~~G~~~~~~~~i~d-~~~~~~~~~~------------~Gel~v-~~~~~~~gy~~~~~~~~~~~~~g~ 388 (431)
.+ ....+++|.|++. ++++| +++.+++.|+ .|||++ +|++++.||+++++.+...|.+||
T Consensus 309 ~~-----~~~~~~~g~~~~~-~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~ 382 (529)
T PRK07867 309 TP-----DTPPGALGPLPPG-VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGV 382 (529)
T ss_pred CC-----CCCCCCcCCCCCC-EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCe
Confidence 22 1345678999843 77888 5688888888 899999 999999999999999988899999
Q ss_pred eecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 389 FHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 389 ~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+|||+++++++|++++.||.+|+|+++|++|+|.|||.+.
T Consensus 383 ~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l 423 (529)
T PRK07867 383 YWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERIL 423 (529)
T ss_pred EeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHH
Confidence 99999999999999999999999999999999999999864
No 84
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=6.9e-57 Score=441.27 Aligned_cols=417 Identities=31% Similarity=0.429 Sum_probs=335.3
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..|+.++|++.++.+|+++|+.+.+ +++||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 20 ~~~~~~~~~~~~~~~p~~~a~~~~~-~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 98 (541)
T TIGR03205 20 RGTLPDLLSKAAADYGPRPALEFRD-RPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARV 98 (541)
T ss_pred CCCHHHHHHHHHHHcCCCceEEECC-cEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 3489999999999999999998755 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCch--hHHHHHHHhcCcccccccccccc---------------hhhhhhhcc
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGN--AAAQAAASKLNISHATATLLDAD---------------SELTLSLAH 145 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 145 (431)
+|++|..+.+++.++++.++++++++++... ....+........ ..+...... ....+....
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLD-RLIVCEDDNWGKVGTPQAPIPADPRIVTYADFV 177 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccce-EEEEecccccccccccccccCCCcccccHHHHH
Confidence 9999999999999999999999999986421 1111111100000 010000000 000000000
Q ss_pred ccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh------cCCCCCeEEEecChhhHHHHHH
Q 014065 146 SESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVY------KLTESDSTVIVLPLFHVHGMLA 219 (431)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~------~~~~~~~~~~~~p~~~~~~~~~ 219 (431)
. ............++++++++|||||||.||+|.++|.++....... ..+ .....+++++.+|++|.+++..
T Consensus 178 ~-~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~ 255 (541)
T TIGR03205 178 K-GAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHIYALTV 255 (541)
T ss_pred h-cCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHHHHHHH
Confidence 0 0000111223456899999999999999999999999987654322 111 2234578999999999999888
Q ss_pred HHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHH
Q 014065 220 GLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRL 299 (431)
Q Consensus 220 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~ 299 (431)
.++.++..|+++++.. .+++..+++.|+++++|++.++|+++..+++.... ....++++|.+++||+++++++.+++
T Consensus 256 ~~~~~l~~g~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~~l~~i~~gg~~~~~~~~~~~ 332 (541)
T TIGR03205 256 ILLRSLRRGDLISLHQ--RFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSL-EKRDLSSLATIGSGGAPLPVEVANFF 332 (541)
T ss_pred HHHHHHhcCCEEEecC--CCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccc-cccCccccceEEEccccCCHHHHHHH
Confidence 7888999999998876 67999999999999999999999999998765332 23346799999999999999999999
Q ss_pred HHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEE--CCCCCcCCCCceeeEEEeCCccccccccC
Q 014065 300 EEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAIL--DEIGVPQEGGAKGEVCIRGPNVTKGYKNN 376 (431)
Q Consensus 300 ~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~--d~~~~~~~~~~~Gel~v~~~~~~~gy~~~ 376 (431)
.+.++.++++.||+||++.....+.. .....++++|+|+ +..++++ |+++++++.|+.|||+++|++++.||+++
T Consensus 333 ~~~~~~~~~~~YG~TE~~~~~~~~~~--~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~ 410 (541)
T TIGR03205 333 ERKTGLKLKSGWGMTETCSPGTGHPP--EGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWNR 410 (541)
T ss_pred HHHhCCCeecccccccCCcccccCCC--CCCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccCC
Confidence 98889999999999999977665532 1234567899998 7777765 56788999999999999999999999999
Q ss_pred cchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 377 PEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 377 ~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
++.+.+.|.++||+|||+++++++|++++.||.+|+||.+|++|+|.|||.+
T Consensus 411 ~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~ 462 (541)
T TIGR03205 411 PEESAEAFVGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQA 462 (541)
T ss_pred hhhhHhhhccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHH
Confidence 9999888989999999999999999999999999999999999999999985
No 85
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.1e-57 Score=445.86 Aligned_cols=419 Identities=30% Similarity=0.433 Sum_probs=337.4
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
.++.+++...++.+|+++|+++.+ +++||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~-~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~v 102 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLG-KDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVV 102 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecC-eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEe
Confidence 478999999999999999998755 6999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccc-c-------------------------cch
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLL-D-------------------------ADS 137 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~~~ 137 (431)
|++|..+.+++.++++.++++.+++++....................... . ...
T Consensus 103 pi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (563)
T PRK06710 103 QTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSESE 182 (563)
T ss_pred ccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhcccccccccccccc
Confidence 99999999999999999999999998865443322211111100000000 0 000
Q ss_pred h-hhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH-HhcCC-CCCeEEEecChhhH
Q 014065 138 E-LTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS-VYKLT-ESDSTVIVLPLFHV 214 (431)
Q Consensus 138 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~-~~~~~-~~~~~~~~~p~~~~ 214 (431)
. ..+..... .............+++++++|||||||.||+|.++|.++..+...... .++.. .++++++.+|++|.
T Consensus 183 ~~~~~~~~~~-~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~ 261 (563)
T PRK06710 183 TIHLWNSVEK-EVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHV 261 (563)
T ss_pred hhhhhhhhhh-ccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCchHHH
Confidence 0 00000000 000000011123578999999999999999999999998765433222 23333 35688899999999
Q ss_pred HHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHH
Q 014065 215 HGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPV 294 (431)
Q Consensus 215 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~ 294 (431)
+++...++.++..|+++++.+ .+++..+++.++++++|++.++|+.+..+++..... ...++++|.+++||++++++
T Consensus 262 ~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~v~~gg~~~~~~ 338 (563)
T PRK06710 262 YGMTAVMNLSIMQGYKMVLIP--KFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLK-EYDISSIRACISGSAPLPVE 338 (563)
T ss_pred HHHHHHHHHHHHcCCeEEEcC--CCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccc-cCChhhhhheeeCCCcCCHH
Confidence 998776778899999999976 678999999999999999999999999988754332 23468999999999999999
Q ss_pred HHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccc
Q 014065 295 ILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKG 372 (431)
Q Consensus 295 ~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~g 372 (431)
+.+++.+.+++++++.||+||++........ .....++++|+|. +..++++| +++.+++.|+.|||+++|+.++.|
T Consensus 339 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~--~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~~g 416 (563)
T PRK06710 339 VQEKFETVTGGKLVEGYGLTESSPVTHSNFL--WEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQIMKG 416 (563)
T ss_pred HHHHHHHhhCCCEecccccccCccccccCcc--cccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCccchh
Confidence 9999999889999999999999876544322 1233457899999 78999998 668999999999999999999999
Q ss_pred cccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 373 YKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 373 y~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+++++.+...+.+|||+|||+++++++|.+++.||.+|+|+.+|.+|+|.+||.+.
T Consensus 417 Y~~~~~~~~~~~~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l 473 (563)
T PRK06710 417 YWNKPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVL 473 (563)
T ss_pred hhCChHHHhhhcccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHH
Confidence 999999998888899999999999999999999999999999999999999999863
No 86
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.8e-58 Score=531.96 Aligned_cols=409 Identities=20% Similarity=0.257 Sum_probs=346.6
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
.++.++|.++|+++|+++|+++.+ +++||+||+++++++|+.|.+.|+++|++|+++++|+++++++++||+++|++++
T Consensus 2003 ~~~~~~~~~~a~~~p~~~A~~~~~-~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~v 2081 (5163)
T PRK12316 2003 PGVHQRIAEQAARAPEAIAVVFGD-QHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYV 2081 (5163)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcCC-CeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEe
Confidence 479999999999999999999755 6999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCe
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDV 163 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (431)
|++|.++.+++.++++.+++++++++.......... .. ...+.+... ..+. ......+.....++++
T Consensus 2082 pld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~---~~--~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~ 2148 (5163)
T PRK12316 2082 PLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP---AG--VARLPLDRD---AEWA-----DYPDTAPAVQLAGENL 2148 (5163)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc---cc--cceEeccch---hhhh-----ccCccCCCCCCCCCCe
Confidence 999999999999999999999999987643322100 00 000001000 0000 0011112234568999
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhh
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAST 243 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 243 (431)
++++|||||||.||||.++|.++.+.+......+++.++++++.+.|++|..++.. ++.+|..|+++++++...+++..
T Consensus 2149 a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~~G~~~~~~~~~~~~~~~ 2227 (5163)
T PRK12316 2149 AYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQ-WFHPLLNGARVLIRDDELWDPEQ 2227 (5163)
T ss_pred EEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHH-HHHHHhCCCEEEeCCcccCCHHH
Confidence 99999999999999999999999999999889999999999999999999988765 99999999999887755678999
Q ss_pred HHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCcccC
Q 014065 244 FWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLMSS 322 (431)
Q Consensus 244 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~~ 322 (431)
+++.++++++|++.++|++++.+.+...... ..+++|.+++|||+++++.++.|.+.+ +..++|.||+||++..++.
T Consensus 2228 ~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~--~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~ 2305 (5163)
T PRK12316 2228 LYDEMERHGVTILDFPPVYLQQLAEHAERDG--RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLL 2305 (5163)
T ss_pred HHHHHHHcCCeEEEcChHHHHHHHhhhhccc--CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeee
Confidence 9999999999999999999999987653321 235899999999999999999999877 6789999999999877655
Q ss_pred CCCCCCC--CCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc--------CCceec
Q 014065 323 NPLPEDG--PHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL--------FGWFHT 391 (431)
Q Consensus 323 ~~~~~~~--~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--------~g~~~T 391 (431)
....... .....++|+|+ |++++|+|+++++++.|++|||+|+|+++++||+++++.+++.|. ++||+|
T Consensus 2306 ~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrT 2385 (5163)
T PRK12316 2306 WKCRPQDPCGAAYVPIGRALGNRRAYILDADLNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRT 2385 (5163)
T ss_pred eecccccccCCCcCCcccccCCCEEEEECCCCCCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEec
Confidence 4322111 11235799999 899999999999999999999999999999999999999998883 249999
Q ss_pred CceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 392 GDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 392 GD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+|++++||.++++||+||+||++|++|+|.|||.+.
T Consensus 2386 GDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l 2423 (5163)
T PRK12316 2386 GDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARL 2423 (5163)
T ss_pred ccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHH
Confidence 99999999999999999999999999999999999863
No 87
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.7e-57 Score=442.06 Aligned_cols=420 Identities=27% Similarity=0.411 Sum_probs=341.9
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVA-AGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
.++.++|+.+++.+|+++|+.+.+ +++||.||.++++++|.+|.+ .|+++||+|+++++|+++++++++||+++|+++
T Consensus 23 ~~l~~~l~~~a~~~p~~~a~~~~~-~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (560)
T PRK08974 23 QSLVDMFEQAVARYADQPAFINMG-EVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIV 101 (560)
T ss_pred ccHHHHHHHHHHhCCCCceEEECC-ccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 579999999999999999998755 699999999999999999985 899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccc-cccc-c--hh--------------------
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATAT-LLDA-D--SE-------------------- 138 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~-------------------- 138 (431)
+|++|..+.+++.++++.++++.++++++..+...++............ ..+. . ..
T Consensus 102 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (560)
T PRK08974 102 VNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHLP 181 (560)
T ss_pred eccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccccccCC
Confidence 9999999999999999999999999988765555444322211110000 0000 0 00
Q ss_pred --hhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhc---CCCCCeEEEecChhh
Q 014065 139 --LTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYK---LTESDSTVIVLPLFH 213 (431)
Q Consensus 139 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~---~~~~~~~~~~~p~~~ 213 (431)
..+...................+++++++|||||||.||+|.++|.++..++......+. ...++.++..+|++|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 261 (560)
T PRK08974 182 DAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPLYH 261 (560)
T ss_pred CcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcHHH
Confidence 000000000000001112245789999999999999999999999999876654433332 344667888999999
Q ss_pred HHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcH
Q 014065 214 VHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAP 293 (431)
Q Consensus 214 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~ 293 (431)
.+++....+..+..|+++++... ..++..+++.++++++|++..+|++++.+.+..... ...++++|.+++||+++++
T Consensus 262 ~~~~~~~~~~~l~~g~~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~lr~~~~gg~~~~~ 339 (560)
T PRK08974 262 IFALTVNCLLFIELGGQNLLITN-PRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQ-ELDFSSLKLSVGGGMAVQQ 339 (560)
T ss_pred HHHHHHHHHHHhhcCCeEEEecC-ccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcc-cCCccceeEEEecCccCCH
Confidence 99987777888889998777543 457889999999999999999999999998765432 3447899999999999999
Q ss_pred HHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccc
Q 014065 294 VILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKG 372 (431)
Q Consensus 294 ~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~g 372 (431)
.+.+.+++.+|+++++.||+||++..+..+.. +....++++|+|+ ++.++++|+++++++.|+.|||+++|+.++.|
T Consensus 340 ~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~--~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gel~v~g~~~~~g 417 (560)
T PRK08974 340 AVAERWVKLTGQYLLEGYGLTECSPLVSVNPY--DLDYYSGSIGLPVPSTEIKLVDDDGNEVPPGEPGELWVKGPQVMLG 417 (560)
T ss_pred HHHHHHHHHhCCcEEeeecccccCceeeccCC--CCcccCCccccCcCCCEEEEECCCCCCCCCCCceEEEEecCCcchh
Confidence 99999999889999999999999977666543 2234567899999 79999999999999999999999999999999
Q ss_pred cccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 373 YKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 373 y~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
|+++++.+...|.+|||+|||+++++++|.+++.||.+|+|+++|.+|+|.+||.+
T Consensus 418 y~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~ 473 (560)
T PRK08974 418 YWQRPEATDEVIKDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDV 473 (560)
T ss_pred hcCChhhhhhhhhcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHH
Confidence 99999888888888999999999999999999999999999999999999999986
No 88
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.8e-57 Score=446.28 Aligned_cols=415 Identities=25% Similarity=0.339 Sum_probs=330.3
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
...|+.++|.+.++++|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 35 ~~~tl~~~l~~~a~~~p~~~Ai~~~~-~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~ 113 (600)
T PRK08279 35 SKRSLGDVFEEAAARHPDRPALLFED-QSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAV 113 (600)
T ss_pred CcccHHHHHHHHHHhCCCCcEEEeCC-CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcE
Confidence 35689999999999999999999755 79999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccccc-----chhhhhhhccccccc-ccccc
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA-----DSELTLSLAHSESDT-NAISK 155 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~ 155 (431)
++++++..+.+++.++++.++++++|++.+..+...................+. .....+......... .....
T Consensus 114 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (600)
T PRK08279 114 VALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAPTTNPASR 193 (600)
T ss_pred EeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCCccCCCcc
Confidence 999999999999999999999999999988766655544332221111111110 000011100000000 01122
Q ss_pred CCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 156 LTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 156 ~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
.....+++++++|||||||.||+|.++|.++..++..+...+++.++++++..+|++|.+++...++.++..|+++++.+
T Consensus 194 ~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~ 273 (600)
T PRK08279 194 SGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRR 273 (600)
T ss_pred cCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcC
Confidence 33456899999999999999999999999999999988888999999999999999999999887888899999999977
Q ss_pred CCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCC-ceecccCcc
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGA-PVLEAYAMT 314 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~-~i~~~yg~t 314 (431)
.+++..+++.++++++|++.++|++++.+++...... ....++|. ++|+.+++++++.+.+.++. .+++.||+|
T Consensus 274 --~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~-~~~~~l~~--~~g~~l~~~~~~~~~~~~~~~~l~~~YG~t 348 (600)
T PRK08279 274 --KFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPT-DRDHRLRL--MIGNGLRPDIWDEFQQRFGIPRILEFYAAS 348 (600)
T ss_pred --CCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCcc-ccCcceeE--EecCCCCHHHHHHHHHHhCcceeeeeeccc
Confidence 7899999999999999999999999999887644322 22455664 45788999999999999975 599999999
Q ss_pred cccCcccCCCCCCCCCCCCCCcccccc-----ce---------EEEECCCC--CcCCCCceeeEE--EeCCccccccccC
Q 014065 315 EATHLMSSNPLPEDGPHKPGSVGRPVG-----QE---------IAILDEIG--VPQEGGAKGEVC--IRGPNVTKGYKNN 376 (431)
Q Consensus 315 E~~~~~~~~~~~~~~~~~~~~~G~~~~-----~~---------~~i~d~~~--~~~~~~~~Gel~--v~~~~~~~gy~~~ 376 (431)
|++..+... ...++++|++.. .. ..+.+.++ .+++.|+.|||+ +++++++.|| ++
T Consensus 349 E~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~ 421 (600)
T PRK08279 349 EGNVGFINV------FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGY-TD 421 (600)
T ss_pred ccceeeccc------CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccccc-CC
Confidence 988543321 123456665432 11 22333333 357889999998 7799999999 77
Q ss_pred cchhhhccc-------CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 377 PEANKSAFL-------FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 377 ~~~~~~~~~-------~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
++.+.+.|. ++||+|||+|++|+||++++.||.||+||++|++|+|.|||.+-
T Consensus 422 ~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l 481 (600)
T PRK08279 422 PEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENAL 481 (600)
T ss_pred chhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHH
Confidence 877766541 47999999999999999999999999999999999999999863
No 89
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.6e-58 Score=529.90 Aligned_cols=409 Identities=20% Similarity=0.295 Sum_probs=347.2
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.++|+++++++|+++|+++.+ +++||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~-~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~ 588 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGE-ETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAY 588 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCC-ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEE
Confidence 3579999999999999999999755 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|++|.++.+++.++++.++++++|++......... . .....+....... ... ............+++
T Consensus 589 vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~----~-~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~ 656 (5163)
T PRK12316 589 VPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL----A-AGVQVLDLDRPAA--WLE-----GYSEENPGTELNPEN 656 (5163)
T ss_pred eccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc----c-cCceEEEecCcch--hhc-----cCCCCCCCCCCCCCC
Confidence 999999999999999999999999998764322110 0 0001111110000 000 111112223456789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC-CCCCh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA-GRFSA 241 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~ 241 (431)
+++++|||||||.||||.++|.++.+.+......+++.++++++...|++|..+++. ++.+|..|+++++.+. ..+++
T Consensus 657 ~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~-~~~~L~~G~~l~i~~~~~~~~~ 735 (5163)
T PRK12316 657 LAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWE-FFWPLMSGARLVVAAPGDHRDP 735 (5163)
T ss_pred eEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHH-HHHHHhCCCEEEECCccccCCH
Confidence 999999999999999999999999999999999999999999999999999999876 8999999999999753 24689
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCcc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLM 320 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~ 320 (431)
..+++.++++++|++.++|++++.+++... ...++++|.+++||+++++++.+.+.+.+ +++++|.||+||++..+
T Consensus 736 ~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~---~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 812 (5163)
T PRK12316 736 AKLVELINREGVDTLHFVPSMLQAFLQDED---VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDV 812 (5163)
T ss_pred HHHHHHHHHcCCeEEEeCHHHHHHHHhccc---cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeee
Confidence 999999999999999999999999986532 22478999999999999999999998776 68999999999998655
Q ss_pred cCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc-------CCceecC
Q 014065 321 SSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL-------FGWFHTG 392 (431)
Q Consensus 321 ~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------~g~~~TG 392 (431)
+.... ........++|+|+ |++++|+|+++++++.|+.|||+|+|+++++||+++++.+++.|. ++||+||
T Consensus 813 ~~~~~-~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TG 891 (5163)
T PRK12316 813 THWTC-VEEGGDSVPIGRPIANLACYILDANLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTG 891 (5163)
T ss_pred eEEec-ccccCCCCCCccccCCCEEEEECCCCCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecC
Confidence 44332 12234456899999 899999999999999999999999999999999999999988873 2499999
Q ss_pred ceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 393 DIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 393 D~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+|++++||.++++||+||+||++|++|+|.|||.+.
T Consensus 892 Dl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l 928 (5163)
T PRK12316 892 DLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARL 928 (5163)
T ss_pred ccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHH
Confidence 9999999999999999999999999999999999874
No 90
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=8.4e-57 Score=442.42 Aligned_cols=421 Identities=23% Similarity=0.337 Sum_probs=329.1
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
+|..+.++..++.+|+++|+.+.+ .++||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~~-~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v 98 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHGS-VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVN 98 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEECC-ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEE
Confidence 467888999999999999998744 6999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcC------cc-cccccccccc------------hhhhhhhc
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLN------IS-HATATLLDAD------------SELTLSLA 144 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~------------~~~~~~~~ 144 (431)
|+++..+.+++.++++.++++.+++++...+...+...... .. ...+.+.+.. ....+...
T Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
T PLN02479 99 CVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYEKF 178 (567)
T ss_pred EeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccHHHH
Confidence 99999999999999999999999999876555444332111 00 0011111000 00000000
Q ss_pred cccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHH
Q 014065 145 HSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSS 224 (431)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 224 (431)
................++.++++|||||||.||+|.++|.++..........+++..+++++..+|++|.+++...+..+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~ 258 (567)
T PLN02479 179 LETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNGWCFTWTLA 258 (567)
T ss_pred HhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhhHHHHHHHH
Confidence 00000000001122334677899999999999999999999876666555667788899999999999999987655556
Q ss_pred HhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhC
Q 014065 225 FAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFG 304 (431)
Q Consensus 225 l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~ 304 (431)
+..|.++++ . .+++..+++.++++++|++..+|+++..+.+.........+++++.++++|+++++.+.+.+.+. +
T Consensus 259 ~~~g~~~~~-~--~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~-~ 334 (567)
T PLN02479 259 ALCGTNICL-R--QVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSEK-G 334 (567)
T ss_pred hhcCceEec-c--CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHHHHhc-C
Confidence 677776655 3 57899999999999999999999999999876543222246889999999999999999998865 8
Q ss_pred CceecccCcccccCcccCCCCCC--------CCCCCCCCccccc-cce-EEEEC-CCCCcCCCC--ceeeEEEeCCcccc
Q 014065 305 APVLEAYAMTEATHLMSSNPLPE--------DGPHKPGSVGRPV-GQE-IAILD-EIGVPQEGG--AKGEVCIRGPNVTK 371 (431)
Q Consensus 305 ~~i~~~yg~tE~~~~~~~~~~~~--------~~~~~~~~~G~~~-~~~-~~i~d-~~~~~~~~~--~~Gel~v~~~~~~~ 371 (431)
.++++.||+||+++.+....... .......+.|.+. +.. ++++| +++.+++.+ +.|||+++|++++.
T Consensus 335 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~ 414 (567)
T PLN02479 335 FRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMK 414 (567)
T ss_pred CceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhh
Confidence 99999999999865433221100 0011123567766 554 88998 567888653 67999999999999
Q ss_pred ccccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 372 GYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 372 gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+++++.+.+.|.+|||+|||++++|++|++++.||.+|+||.+|++|+|.|||.+.
T Consensus 415 GY~~~~~~t~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l 472 (567)
T PLN02479 415 GYLKNPKANEEAFANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVV 472 (567)
T ss_pred hhhcCcccccchhcCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999864
No 91
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-56 Score=442.33 Aligned_cols=422 Identities=22% Similarity=0.303 Sum_probs=337.7
Q ss_pred cccHHHHHHHHHHhcCCcceEEecC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHhC
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSG--KFDLTYSRIHELVERAASRLVA-AGINAGDVVALTFPNTVEFVIMFLAVIRAR 79 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~--~~~~Ty~el~~~~~~~a~~L~~-~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 79 (431)
..|+.++|++.|..+|+++|+++.+ ++++||+||.++++++|++|++ .|+++||+|+++++|+++++++++||+++|
T Consensus 9 ~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G 88 (576)
T PRK05620 9 PLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMG 88 (576)
T ss_pred CCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcC
Confidence 3689999999999999999998743 3799999999999999999997 799999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccch------------hhhhhhcccc
Q 014065 80 ATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADS------------ELTLSLAHSE 147 (431)
Q Consensus 80 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 147 (431)
+++++++|..+.+++.++++.++++++|+++...+.+.............+....... ...+.....
T Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 167 (576)
T PRK05620 89 AVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLD- 167 (576)
T ss_pred CEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhh-
Confidence 9999999999999999999999999999998876666555443322111111111000 000111000
Q ss_pred ccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHH--HHHhcCCCCCeEEEecChhhHHHHHHHHHHHH
Q 014065 148 SDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNI--KSVYKLTESDSTVIVLPLFHVHGMLAGLLSSF 225 (431)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 225 (431)
............++++++++|||||||.||+|.++|.++....... ...+++..++++++.+|++|.+++.. .+.++
T Consensus 168 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~-~~~~l 246 (576)
T PRK05620 168 GRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWGV-PLAAF 246 (576)
T ss_pred cCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhHH-HHHHH
Confidence 0011111233456899999999999999999999999986554432 33567888999999999999999876 78889
Q ss_pred hcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCC
Q 014065 226 AAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGA 305 (431)
Q Consensus 226 ~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~ 305 (431)
..|+++++.+. .+++..+++.+++++++++..+|+++..++.+..... ....++|.+++||+++++++.+.+.+.+++
T Consensus 247 ~~g~~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~ 324 (576)
T PRK05620 247 MSGTPLVFPGP-DLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNP-PERMSLQEIYVGGSAVPPILIKAWEERYGV 324 (576)
T ss_pred hcCceEEecCC-CCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccC-cccCceeEEEEcCCCCCHHHHHHHHHHhCC
Confidence 99999988754 5789999999999999999999999998876543222 224589999999999999999999999999
Q ss_pred ceecccCcccccCcccCCCCCCC-----CCCCCCCccccc-cceEEEECCCCCcCC--CCceeeEEEeCCccccccccCc
Q 014065 306 PVLEAYAMTEATHLMSSNPLPED-----GPHKPGSVGRPV-GQEIAILDEIGVPQE--GGAKGEVCIRGPNVTKGYKNNP 377 (431)
Q Consensus 306 ~i~~~yg~tE~~~~~~~~~~~~~-----~~~~~~~~G~~~-~~~~~i~d~~~~~~~--~~~~Gel~v~~~~~~~gy~~~~ 377 (431)
++++.||+||++..+........ ......++|++. +++++++|+ |..++ .++.|||+++|+.++.||++++
T Consensus 325 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~~ 403 (576)
T PRK05620 325 DVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-GQVMESTDRNEGEIQVRGNWVTASYYHSP 403 (576)
T ss_pred ceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC-CccccCCCCCceEEEEEcCcccccccCCc
Confidence 99999999999876554332110 011234788888 899999997 76664 4678999999999999999988
Q ss_pred chh----------------hhcc-cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 378 EAN----------------KSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 378 ~~~----------------~~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+.+ ...+ .+|||+|||++++++||.+++.||.+|+||.+|++|+|.+||.+.
T Consensus 404 ~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l 472 (576)
T PRK05620 404 TEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYI 472 (576)
T ss_pred cccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHH
Confidence 766 2223 368999999999999999999999999999999999999999864
No 92
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.5e-57 Score=434.47 Aligned_cols=380 Identities=31% Similarity=0.452 Sum_probs=323.2
Q ss_pred HHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHH
Q 014065 13 VIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPD 92 (431)
Q Consensus 13 ~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 92 (431)
.++..++++|++.. ++++||+||.++++++|..|. ++|+|+++++|+++++++++||+++|++++|+++..+.+
T Consensus 9 ~~~~~~~~~a~~~~-~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~ 82 (471)
T PRK07787 9 VAAAADIADAVRIG-GRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVA 82 (471)
T ss_pred hhcccCCceEEEeC-CcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChH
Confidence 34566899999874 479999999999999999985 579999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCeEEEEeccCC
Q 014065 93 EFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGT 172 (431)
Q Consensus 93 ~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 172 (431)
++.++++.+++++++++..... .......... .. . .........++++++++|||||
T Consensus 83 ~l~~~l~~~~~~~il~~~~~~~--------~~~~~~~~~~-~~------------~--~~~~~~~~~~~~~a~i~~TSGT 139 (471)
T PRK07787 83 ERRHILADSGAQAWLGPAPDDP--------AGLPHVPVRL-HA------------R--SWHRYPEPDPDAPALIVYTSGT 139 (471)
T ss_pred HHHHHHHhcCCCEEEecCCccc--------ccccceeeec-cc------------c--ccccCCCCCCCceEEEEECCCC
Confidence 9999999999999999764110 0000000000 00 0 0001112356899999999999
Q ss_pred CCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhc
Q 014065 173 TSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYN 252 (431)
Q Consensus 173 TG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~ 252 (431)
||.||+|.++|.++..++......+++.++++++..+|++|.+|++..++.++..|+++++.+ .+++..+++.++ ++
T Consensus 140 TG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~-~~ 216 (471)
T PRK07787 140 TGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG--RPTPEAYAQALS-EG 216 (471)
T ss_pred CCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC--CCCHHHHHHHHh-hC
Confidence 999999999999999988888888889999999999999999999988999999999999876 678999999999 99
Q ss_pred ceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCC
Q 014065 253 ATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHK 332 (431)
Q Consensus 253 ~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~ 332 (431)
++++.++|+++..+++.... ...++++|.+++||+++++++++++.+.++.++++.||+||++....... +....
T Consensus 217 ~t~~~~~P~~~~~l~~~~~~--~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~---~~~~~ 291 (471)
T PRK07787 217 GTLYFGVPTVWSRIAADPEA--ARALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLSTRA---DGERR 291 (471)
T ss_pred ceEEEcchHHHHHHHhCccc--cccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceecCC---CCccc
Confidence 99999999999999875432 23468999999999999999999999989999999999999986554432 23445
Q ss_pred CCCccccc-cceEEEECCCCCcCC-CCc-eeeEEEeCCccccccccCcchhhhccc-CCceecCceEEEcCCCeEEEecc
Q 014065 333 PGSVGRPV-GQEIAILDEIGVPQE-GGA-KGEVCIRGPNVTKGYKNNPEANKSAFL-FGWFHTGDIGYFDSDGYLHLVGR 408 (431)
Q Consensus 333 ~~~~G~~~-~~~~~i~d~~~~~~~-~~~-~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~gR 408 (431)
++++|+|+ +..++|+|+++.+++ .++ .|||+++|++++.||+++++.+++.|. +|||+|||+|++++||++++.||
T Consensus 292 ~~~vG~~~~g~~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR 371 (471)
T PRK07787 292 PGWVGLPLAGVETRLVDEDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGR 371 (471)
T ss_pred CCcccccCCCcEEEEECCCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCC
Confidence 67899999 899999998898887 343 799999999999999999999988885 79999999999999999999999
Q ss_pred c-ccceecCCeeccccceeccc
Q 014065 409 I-KELINRGGNLHESISLFLAK 429 (431)
Q Consensus 409 ~-~d~i~~~G~~i~~~~iE~a~ 429 (431)
. +|+++.+|++|+|.+||.+.
T Consensus 372 ~~d~~i~~~G~~v~~~eIE~~l 393 (471)
T PRK07787 372 ESTDLIKSGGYRIGAGEIETAL 393 (471)
T ss_pred CCceeEeeCCEEECHHHHHHHH
Confidence 6 88999999999999999863
No 93
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.6e-57 Score=517.58 Aligned_cols=410 Identities=25% Similarity=0.354 Sum_probs=346.8
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.++|+++++++|+++|+++.+ +++||+||+++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 511 ~~~~~~~~~~~a~~~pd~~Al~~~~-~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lail~aG~~~ 589 (3956)
T PRK12467 511 PDCVHQLIEAQARQHPERPALVFGE-QVLSYAELNRQANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLLAVLKAGGAY 589 (3956)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCC-ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCcEE
Confidence 3579999999999999999999755 799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|++|.++.+++.++++++++++++++.+...... ... ....+.+..... ... ......+.....+++
T Consensus 590 vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~----~~~-~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~ 657 (3956)
T PRK12467 590 VPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLP----VPA-GLRSLCLDEPAD--LLC-----GYSGHNPEVALDPDN 657 (3956)
T ss_pred eccCCCChHHHHHHHHHhcCCCEEEechhhhhhcc----ccc-CccEEEeccccc--ccc-----ccCCCCCCCCCCCCC
Confidence 99999999999999999999999999875332211 000 000110110000 000 001111223456789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-CCCh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG-RFSA 241 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~ 241 (431)
+++++|||||||.||+|.++|.++.+.+......+++.++++++...|++|..+++. ++.++..|+++++.+.. .+++
T Consensus 658 ~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~L~~G~~lv~~~~~~~~~~ 736 (3956)
T PRK12467 658 LAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGVTE-LFGALASGATLHLLPPDCARDA 736 (3956)
T ss_pred eEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHHHH-HHHHHhCCCEEEEcCccccCCH
Confidence 999999999999999999999999999998888999999999999999999999877 89999999999997743 4689
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCcc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLM 320 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~ 320 (431)
..+++.|+++++|++.++|++++.+++..... ...++|.+++|||++++++.+.+.+.+ +++++|.||+||++..+
T Consensus 737 ~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~---~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 813 (3956)
T PRK12467 737 EAFAALMADQGVTVLKIVPSHLQALLQASRVA---LPRPQRALVCGGEALQVDLLARVRALGPGARLINHYGPTETTVGV 813 (3956)
T ss_pred HHHHHHHHHcCCeEEEcCHHHHHHHHhhhccc---cCCcccEEEEEeecCCHHHHHHHHHhCCCCEEEeCcCCChhhhhe
Confidence 99999999999999999999999998754322 246789999999999999999999876 68999999999999877
Q ss_pred cCCCCCCCC-CCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccC--------Ccee
Q 014065 321 SSNPLPEDG-PHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF--------GWFH 390 (431)
Q Consensus 321 ~~~~~~~~~-~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~--------g~~~ 390 (431)
+........ .....++|+|+ ++.++|+|+++++++.|+.|||+|+|+++++||+++++.+++.|.. +||+
T Consensus 814 ~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yr 893 (3956)
T PRK12467 814 STYELSDEERDFGNVPIGQPLANLGLYILDHYLNPVPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYR 893 (3956)
T ss_pred eeEecccccccCCCCcccCCcCCCEEEEECCCCCCCCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEe
Confidence 665432211 12236799999 8999999999999999999999999999999999999999888731 3999
Q ss_pred cCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 391 TGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 391 TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|||+|++++||.++++||.||+||++|++|+|.|||.+.
T Consensus 894 TGDl~~~~~dG~l~~~GR~d~~vki~G~rI~~~eIE~~L 932 (3956)
T PRK12467 894 TGDLARYRADGVIEYLGRMDHQVKIRGFRIELGEIEARL 932 (3956)
T ss_pred cCceeEEcCCCcEEEeccccCeEEECCEecCHHHHHHHH
Confidence 999999999999999999999999999999999999864
No 94
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-57 Score=447.35 Aligned_cols=414 Identities=23% Similarity=0.337 Sum_probs=320.8
Q ss_pred ccHHHHHHHHHHhcCCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAV 75 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 75 (431)
+++.++|++++..+|+++|+++.+ .+++||+||.++++++|++|.+.| .+||+|+++++|+++++++++||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 478899999999999999998632 268999999999999999999999 68999999999999999999999
Q ss_pred HHhCcEEEecCC---CCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCc-ccccccccccchhhhhhhcccccccc
Q 014065 76 IRARATAAPLNA---AYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNI-SHATATLLDADSELTLSLAHSESDTN 151 (431)
Q Consensus 76 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (431)
+++|++++|+++ ..+.+++.++++.+++++++++++..+.+.+....... ....+...+. . ... . ..
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~---~-~~ 150 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDL---L--DLD---S-PR 150 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeecc---c--ccc---c-CC
Confidence 999999999997 45788999999999999999998766554433221110 0000000000 0 000 0 00
Q ss_pred ccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh-c-----CCCCCeEEEecChhhHHHHHHHHHHHH
Q 014065 152 AISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVY-K-----LTESDSTVIVLPLFHVHGMLAGLLSSF 225 (431)
Q Consensus 152 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-~-----~~~~~~~~~~~p~~~~~~~~~~~~~~l 225 (431)
.........+++++++|||||||.||+|.++|.+++.++....... . ...++++++.+|++|..|++..++.++
T Consensus 151 ~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l 230 (578)
T PRK05850 151 GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPI 230 (578)
T ss_pred ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHH
Confidence 0112234568999999999999999999999999988776554332 2 355789999999999999988899999
Q ss_pred hcCCEEEeCCCCC--CChhhHHHHHHHhcceeeecchHHHH-HHHhcccC--CCCCCCCCccEEEeccCCCcHHHHHHHH
Q 014065 226 AAGAAVTLPAAGR--FSASTFWQDMIKYNATWYTAVPTIHQ-IVLDRHVA--KPEPVYPKLRFIRSCSASLAPVILSRLE 300 (431)
Q Consensus 226 ~~G~~~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~p~~~~-~l~~~~~~--~~~~~~~~l~~i~~~g~~~~~~~~~~~~ 300 (431)
+.|+++++.+... .++..+++.+.+++++.. .+|..+. .+...... ....+++++|.+++||+++++++.+++.
T Consensus 231 ~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~ 309 (578)
T PRK05850 231 LGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLKRFA 309 (578)
T ss_pred hcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHHHHH
Confidence 9999999876322 268899999999999865 5665543 33322111 1123467899999999999999999998
Q ss_pred HHhC------CceecccCcccccCcccCCCCCCCC----------------------CCCCCCccccccceEEEECC-CC
Q 014065 301 EAFG------APVLEAYAMTEATHLMSSNPLPEDG----------------------PHKPGSVGRPVGQEIAILDE-IG 351 (431)
Q Consensus 301 ~~~~------~~i~~~yg~tE~~~~~~~~~~~~~~----------------------~~~~~~~G~~~~~~~~i~d~-~~ 351 (431)
+.|+ ..+++.||+||++..+......... .....++|.|.+.+++++|+ ++
T Consensus 310 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~~~~~~ivd~~~~ 389 (578)
T PRK05850 310 DRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPRSPTVRIVDPDTC 389 (578)
T ss_pred HHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCCCCEEEEEcCCCC
Confidence 8873 3689999999987655433211000 00112345565678999995 47
Q ss_pred CcCCCCceeeEEEeCCccccccccCcchhhhccc------------CCceecCceEEEcCCCeEEEecccccceecCCee
Q 014065 352 VPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL------------FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNL 419 (431)
Q Consensus 352 ~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~ 419 (431)
.+++.|+.|||+++|+.++.||+++++.+++.|. ++||+|||+|+++ +|++++.||.+|+||++|++
T Consensus 390 ~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~~G~~ 468 (578)
T PRK05850 390 IECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIVDGRN 468 (578)
T ss_pred cCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEECCee
Confidence 8999999999999999999999999999988773 4799999999997 99999999999999999999
Q ss_pred ccccceeccc
Q 014065 420 HESISLFLAK 429 (431)
Q Consensus 420 i~~~~iE~a~ 429 (431)
|+|.|||.+.
T Consensus 469 i~p~eIE~~l 478 (578)
T PRK05850 469 HYPDDIEATI 478 (578)
T ss_pred cCHHHHHHHH
Confidence 9999999863
No 95
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.3e-57 Score=522.20 Aligned_cols=412 Identities=20% Similarity=0.271 Sum_probs=349.4
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
.++.++|.++++++|+++|+...+ .++||+||+++++++|+.|++.|+++|++|+++++++++++++++|++++|++++
T Consensus 3720 ~~~~~~~~~~~~~~p~~~Av~~~~-~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~v 3798 (4334)
T PRK05691 3720 QSYVRLFEAQVAAHPQRIAASCLD-QQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYL 3798 (4334)
T ss_pred cCHHHHHHHHHHhCCCceEEEcCC-CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEe
Confidence 578999999999999999999766 5999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccc-ccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISH-ATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
|++|.++.+++.++++.+++++++++.................. ..+...+. ..........+.....+++
T Consensus 3799 pld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 3870 (4334)
T PRK05691 3799 PLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEE--------VQAGEVASHNPGIYSGPDN 3870 (4334)
T ss_pred CCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecc--------cccccccccCCCCCCCCCc
Confidence 99999999999999999999999999876544333332221100 00000000 0000111112223456789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-CCCh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG-RFSA 241 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~ 241 (431)
.+|++|||||||.||||+++|+++.+.+......++++++++++...++.+..+.+. ++.++..|+++++++.. ..++
T Consensus 3871 ~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~-~~~~l~~G~~l~i~~~~~~~~~ 3949 (4334)
T PRK05691 3871 LAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQ-FLAAPLFGARVEIVPNAIAHDP 3949 (4334)
T ss_pred eEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHH-HHHHHhCCCEEEEcCccccCCH
Confidence 999999999999999999999999999999889999999999999999999999877 89999999999987632 3578
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCcc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLM 320 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~ 320 (431)
..+++.++++++|++..+|++++.++.... ..++++|.+++|||++++++.+.|.+.+ +++++|.||+||++..+
T Consensus 3950 ~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~----~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~ 4025 (4334)
T PRK05691 3950 QGLLAHVQAQGITVLESVPSLIQGMLAEDR----QALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDV 4025 (4334)
T ss_pred HHHHHHHHHcCCeEEEeCHHHHHHHHhhcc----ccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEE
Confidence 999999999999999999999998875432 2368999999999999999999998876 78999999999999876
Q ss_pred cCCCCCC-CCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc--------CCcee
Q 014065 321 SSNPLPE-DGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL--------FGWFH 390 (431)
Q Consensus 321 ~~~~~~~-~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--------~g~~~ 390 (431)
+...... .......++|+|+ |+.+.|+|+.++++|.|.+|||+|+|+++++||+++++.+++.|. ++||+
T Consensus 4026 ~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yr 4105 (4334)
T PRK05691 4026 AFFRVDLASTRGSYLPIGSPTDNNRLYLLDEALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYR 4105 (4334)
T ss_pred EEEEcccccccCCcCCCCCccCCCEEEEECCCCCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeec
Confidence 6543221 1123345799999 899999999999999999999999999999999999999998884 35999
Q ss_pred cCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 391 TGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 391 TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|||+|++++||.++++||.|++||++|++|.+.|||.+.
T Consensus 4106 TGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l 4144 (4334)
T PRK05691 4106 TGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARL 4144 (4334)
T ss_pred cCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHH
Confidence 999999999999999999999999999999999999863
No 96
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.1e-56 Score=436.79 Aligned_cols=405 Identities=22% Similarity=0.313 Sum_probs=337.1
Q ss_pred cHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEe
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAP 84 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 84 (431)
++.+.|.+.|+.+|+++|+...+ +++||+||.++++++|+.|.+.|+++||+|+++++|+.+++++++||+++|++++|
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~-~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQG-QELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIP 79 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCC-cEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeC
Confidence 57899999999999999998655 69999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCeE
Q 014065 85 LNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVA 164 (431)
Q Consensus 85 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (431)
+++.++.+++.++++..+++.++++.+....... .. .+.+... ..... ............+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~------~~--~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~ 144 (502)
T TIGR01734 80 VDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG------TQ--IITLSAL------EQAET-SGGPVSFDHAVKGDDNY 144 (502)
T ss_pred CCCcChHHHHHHHHHhcCCCEEEecccccccccC------Cc--eEEchHh------hhhhh-hcCCccccccCCCCCeE
Confidence 9999999999999999999999998764322110 00 1101000 00000 00001112234578899
Q ss_pred EEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-CCChhh
Q 014065 165 LFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG-RFSAST 243 (431)
Q Consensus 165 ~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~~~ 243 (431)
+++|||||||.||+|.++|.++...+......++...+++++..+|++|..++.. ++.++..|+++++.+.. ..++..
T Consensus 145 ~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~~ 223 (502)
T TIGR01734 145 YIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMD-LYPCLASGGTLHCLDKDITNNFKL 223 (502)
T ss_pred EEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHH-HHHHHHCCCEEEEcCHHHhcCHHH
Confidence 9999999999999999999999988888888888899999999999999998865 88999999999987632 247899
Q ss_pred HHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCcccC
Q 014065 244 FWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLMSS 322 (431)
Q Consensus 244 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~~ 322 (431)
+++.+.+++++.+..+|.+++.++..... ....+++++.++++|++++++..+++.+.+ ++++++.||+||++..++.
T Consensus 224 ~~~~i~~~~~~~~~~~p~~~~~~l~~~~~-~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~ 302 (502)
T TIGR01734 224 LFEELPKTGLNVWVSTPSFVDMCLLDPNF-NQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTS 302 (502)
T ss_pred HHHHHHHcCCeEEEEChhHHHHHHhcccc-ccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEE
Confidence 99999999999999999999887655332 233478999999999999999999999988 7899999999998764443
Q ss_pred CCCCC--CCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc--C--CceecCceE
Q 014065 323 NPLPE--DGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL--F--GWFHTGDIG 395 (431)
Q Consensus 323 ~~~~~--~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~--g~~~TGD~~ 395 (431)
..... .......++|+|. +++++|+|+++++++.|+.|||+++|+.++.||+++++.+...|. + +||+|||+|
T Consensus 303 ~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg 382 (502)
T TIGR01734 303 VKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAG 382 (502)
T ss_pred EEccccccccCCccccccccCCCEEEEECCCCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEE
Confidence 22111 1233445799998 899999999999999999999999999999999999988877663 2 599999999
Q ss_pred EEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 396 YFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 396 ~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
++|++ ++++.||.+|+|+.+|++|+|.+||.+
T Consensus 383 ~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~ 414 (502)
T TIGR01734 383 TITDG-QLFYQGRLDFQIKLHGYRIELEDIEFN 414 (502)
T ss_pred EEECC-EEEEeccccCeEEECcEEeCHHHHHHH
Confidence 99977 999999999999999999999999975
No 97
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-56 Score=436.31 Aligned_cols=418 Identities=23% Similarity=0.328 Sum_probs=333.9
Q ss_pred ccHHHHHHHHHHhcCCcceEEec--C-CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVS--G-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~--~-~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
+|+.++|++.|+++|++++++.. + .+++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~ 89 (542)
T PRK06018 10 LLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIGA 89 (542)
T ss_pred CCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcCe
Confidence 78999999999999999999852 2 26899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccch--------hhhhhhccccccccc
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADS--------ELTLSLAHSESDTNA 152 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 152 (431)
+++|+++..+.+++.++++.++++.++++.+..+.+.+...........+...+... ...+........ ..
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 168 (542)
T PRK06018 90 ICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIAEAD-GD 168 (542)
T ss_pred EeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhccCC-cc
Confidence 999999999999999999999999999998877666655443321111111111100 000000000000 01
Q ss_pred cccCCCCCCCeEEEEeccCCCCCCCeeeechHHHH-H-HHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCE
Q 014065 153 ISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLA-A-SVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAA 230 (431)
Q Consensus 153 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~-~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~ 230 (431)
........+++++++|||||||.||+|.++|.+.+ . ........+++..+++++..+|++|.+++.. .+.++..|++
T Consensus 169 ~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~-~~~~~~~g~~ 247 (542)
T PRK06018 169 FAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGI-AFSAPSMGTK 247 (542)
T ss_pred cCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHH-HHhhhhcCce
Confidence 11123456789999999999999999999999743 2 2223345667889999999999999988876 5678899999
Q ss_pred EEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecc
Q 014065 231 VTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEA 310 (431)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~ 310 (431)
++++.. .+++..+++.++++++|.+.++|+.++.+.++.... ..+++++|.++++|+++++++.+++++ +++++++.
T Consensus 248 ~v~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~ 324 (542)
T PRK06018 248 LVMPGA-KLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKE-GLKLPHLKMVVCGGSAMPRSMIKAFED-MGVEVRHA 324 (542)
T ss_pred EEccCc-CCCHHHHHHHHHhcCCceeecCcHHHHHHHhccccc-CCCcccceEEEEcCCCCCHHHHHHHHH-hCCCeEee
Confidence 988653 678899999999999999999999999998766433 234789999999999999999999999 89999999
Q ss_pred cCcccccCcccCCCCCCC--------CCCCCCCccccc-cceEEEECCCCCcCCCC--ceeeEEEeCCccccccccCcch
Q 014065 311 YAMTEATHLMSSNPLPED--------GPHKPGSVGRPV-GQEIAILDEIGVPQEGG--AKGEVCIRGPNVTKGYKNNPEA 379 (431)
Q Consensus 311 yg~tE~~~~~~~~~~~~~--------~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~--~~Gel~v~~~~~~~gy~~~~~~ 379 (431)
||+||++.+......... ......++|+|. +++++|+|+++++++.+ ..|||+++|++++.||++...
T Consensus 325 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~~- 403 (542)
T PRK06018 325 WGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPWDGKTFGRLKVRGPAVAAAYYRVDG- 403 (542)
T ss_pred ecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCCCCCceeEEEEecCCcchhhhcCcc-
Confidence 999999977654322111 011235789998 79999999999888753 679999999999999998322
Q ss_pred hhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 380 NKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 380 ~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
.....+|||+|||+++++++|++++.||.+|+|+++|++++|.|||.+
T Consensus 404 -~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~ 451 (542)
T PRK06018 404 -EILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENL 451 (542)
T ss_pred -cEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHH
Confidence 112246899999999999999999999999999999999999999975
No 98
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-56 Score=434.48 Aligned_cols=405 Identities=25% Similarity=0.303 Sum_probs=321.7
Q ss_pred HHHHhcCCcceEEec-CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCC
Q 014065 12 QVIDQFSSKRALSVS-GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYT 90 (431)
Q Consensus 12 ~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~ 90 (431)
.+|+++|+++|+++. +++++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 467889999999864 3579999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccccc-chhhhhhhccccccccccccCCCCCCCeEEEEec
Q 014065 91 PDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA-DSELTLSLAHSESDTNAISKLTNDPSDVALFLHT 169 (431)
Q Consensus 91 ~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 169 (431)
.+++.++++.++++.++++................ .+.+... .....+..... . ........++.++++||
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~a~i~~T 156 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKVGADLPL---RLSFGGEIDGFGSFEAALA-G----AGPRLTEQPCGAVMLYS 156 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccce---EEEecCcccccccHHHHhc-c----cCCCCCCCcccEEEEeC
Confidence 99999999999999999987643332222111110 0000000 00000000000 0 00011122357999999
Q ss_pred cCCCCCCCeeee--chHHHHHHH----HHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhh
Q 014065 170 SGTTSRPKGVPL--TQNNLAASV----SNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAST 243 (431)
Q Consensus 170 SGtTG~pK~v~~--s~~~l~~~~----~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 243 (431)
|||||.||+|.+ +|.++.... ......+++..+++++..+|++|..++.. ....+..|+++++.+ .+++..
T Consensus 157 SGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~-~~~~~~~g~~~~~~~--~~~~~~ 233 (501)
T PRK13390 157 SGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRW-CSMVHALGGTVVLAK--RFDAQA 233 (501)
T ss_pred CCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHH-HHHHHhcCceEEEcC--CcCHHH
Confidence 999999999996 444443321 11234567888999999999999988765 344567899999876 678999
Q ss_pred HHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccC
Q 014065 244 FWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSS 322 (431)
Q Consensus 244 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~ 322 (431)
+++.|+++++|++.++|+++..+.+.... ....+++++|.++.+|+++++++.+.+.+.++..+++.||+||+++++..
T Consensus 234 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 313 (501)
T PRK13390 234 TLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTEAHGMTFI 313 (501)
T ss_pred HHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccccCceEEe
Confidence 99999999999999999999998865432 12334679999999999999999999999889999999999999875544
Q ss_pred CCCCCCCCCCCCCccccccceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc---CCceecCceEEEcC
Q 014065 323 NPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL---FGWFHTGDIGYFDS 399 (431)
Q Consensus 323 ~~~~~~~~~~~~~~G~~~~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~---~g~~~TGD~~~~~~ 399 (431)
.. .......+++|+|++..++++|++|++++.|+.|||++++++++.||+++++.+.+.+. ++|++|||+|++|+
T Consensus 314 ~~--~~~~~~~~~~G~~~~g~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~ 391 (501)
T PRK13390 314 DS--PDWLAHPGSVGRSVLGDLHICDDDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDE 391 (501)
T ss_pred cc--hhhccCCCCcCCcccceEEEECCCCCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECC
Confidence 32 12234567899999337999999999999999999999999999999999998887763 57999999999999
Q ss_pred CCeEEEecccccceecCCeeccccceeccc
Q 014065 400 DGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 400 ~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||++++.||.||+||++|.+|+|.|||.+.
T Consensus 392 dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l 421 (501)
T PRK13390 392 DGYLYLADRKSFMIISGGVNIYPQETENAL 421 (501)
T ss_pred CCeEEEeeccccceeECCeeeCHHHHHHHH
Confidence 999999999999999999999999999763
No 99
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=9.3e-58 Score=407.05 Aligned_cols=423 Identities=27% Similarity=0.377 Sum_probs=342.9
Q ss_pred ccHHHHHHHHHHhcCCcceEEecC----------------------CCcccHHHHHHHHHHHHHHHHHcCCCCCCE-EEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSG----------------------KFDLTYSRIHELVERAASRLVAAGINAGDV-VAL 60 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~----------------------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~-V~i 60 (431)
-|+.+++++.++++.++.++-+.+ ...+||.|+..++.++|++|...|++++++ |+|
T Consensus 41 ~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~i 120 (678)
T KOG1180|consen 41 STLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAI 120 (678)
T ss_pred ccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 478999999999999999985431 156899999999999999999999998776 999
Q ss_pred ECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc----
Q 014065 61 TFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD---- 136 (431)
Q Consensus 61 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 136 (431)
+++.+.+|+++++||++.+...|.+..++..+.+.|-|++++++.+|++.+..+.+....+.......++.+.+.+
T Consensus 121 Fa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~~d~id~~~~ 200 (678)
T KOG1180|consen 121 FAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHIIYFDPIDYDAA 200 (678)
T ss_pred EecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEEEEecCCCCccc
Confidence 9999999999999999999999999999999999999999999999999998887766666555444444443211
Q ss_pred -hhh-----------hhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh-cCCCCC
Q 014065 137 -SEL-----------TLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVY-KLTESD 203 (431)
Q Consensus 137 -~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-~~~~~~ 203 (431)
+.. .++...........++.++.++|+|+|+|||||||.||||+++|.|+++.+....... .+.+.|
T Consensus 201 ~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D 280 (678)
T KOG1180|consen 201 KDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKD 280 (678)
T ss_pred hhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCc
Confidence 111 1111111112222334445789999999999999999999999999999988777665 678999
Q ss_pred eEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCC-C-----hhhHHHHHHHhcceeeecchHHHHHHHhcccCC----
Q 014065 204 STVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRF-S-----ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK---- 273 (431)
Q Consensus 204 ~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~-~-----~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~---- 273 (431)
+++.++|+.|.+.+.+ =+.+++.|+.+-..+...+ | ...---.+..++||.|.++|..|+++.+...++
T Consensus 281 ~yi~yLPLAHIlEl~a-E~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~ 359 (678)
T KOG1180|consen 281 RYIAYLPLAHILELTA-ELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAM 359 (678)
T ss_pred eEEEechHHHHHHHHH-HHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhc
Confidence 9999999999999988 6788999999987653222 1 111223456789999999999999987632111
Q ss_pred -------------------------------------CCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccc
Q 014065 274 -------------------------------------PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEA 316 (431)
Q Consensus 274 -------------------------------------~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~ 316 (431)
+...-.++|.+++||++++++..+.+.-.+.+++.++||.||+
T Consensus 360 ~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~qGYGLTEt 439 (678)
T KOG1180|consen 360 PGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVLQGYGLTET 439 (678)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhccccccccccccch
Confidence 0112368999999999999999999998889999999999999
Q ss_pred cCcccCCCCCCCCCCCCCCccccc-cceEEEEC-CCCCcCCCC--ceeeEEEeCCccccccccCcchhhhccc--CC--c
Q 014065 317 THLMSSNPLPEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGG--AKGEVCIRGPNVTKGYKNNPEANKSAFL--FG--W 388 (431)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~--~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~g--~ 388 (431)
+...+.... .....+.+|.|+ .++++++| ++|--...+ ..||||++|++++.||+++++.+++.|. +| |
T Consensus 440 ca~~tv~e~---~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~W 516 (678)
T KOG1180|consen 440 CAAATVLEP---EDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRW 516 (678)
T ss_pred hcccEecCh---hhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhceecCCcEE
Confidence 877666543 456667999999 59999999 664333322 4799999999999999999999999993 68 9
Q ss_pred eecCceEEEcCCCeEEEeccccccee-cCCeeccccceecccc
Q 014065 389 FHTGDIGYFDSDGYLHLVGRIKELIN-RGGNLHESISLFLAKF 430 (431)
Q Consensus 389 ~~TGD~~~~~~~g~l~~~gR~~d~i~-~~G~~i~~~~iE~a~~ 430 (431)
|+|||+|++.+||.|.+.+|++|.+| .+|+-|+.+.||.|.+
T Consensus 517 F~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~ 559 (678)
T KOG1180|consen 517 FRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALR 559 (678)
T ss_pred EeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHh
Confidence 99999999999999999999999999 6899999999999865
No 100
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.4e-56 Score=515.83 Aligned_cols=407 Identities=23% Similarity=0.328 Sum_probs=346.2
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.++|+++++++|+++|+.+.+ .++||+||.++++++|+.|++.|+++|++|+++++++++++++++|++++|+++
T Consensus 1130 ~~~l~~~~~~~a~~~p~~~Al~~~~-~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~~ 1208 (4334)
T PRK05691 1130 QAWLPELLNEQARQTPERIALVWDG-GSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGAY 1208 (4334)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEECC-ceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 3579999999999999999999765 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|++|.++.+++.++++.++++++|++......+.... .. ..+..... ... ......+.....+++
T Consensus 1209 vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~---~~--~~~~~~~~----~~~-----~~~~~~~~~~~~~~~ 1274 (4334)
T PRK05691 1209 VPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAE---GV--SAIALDSL----HLD-----SWPSQAPGLHLHGDN 1274 (4334)
T ss_pred EecCcCChHHHHHHHHHhcCCCEEEecchhhhhccccc---Cc--eEEeeccc----ccc-----ccCCCCCCCCCCCCC
Confidence 99999999999999999999999999876443221100 00 00000000 000 000111122345789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC-CCCCh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA-GRFSA 241 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~ 241 (431)
+++++|||||||.||||.++|+++.+.+......+++.++++++...|++|..+++. ++.+|..|+++++.+. ...++
T Consensus 1275 ~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~~-~~~~L~~G~~l~i~~~~~~~~~ 1353 (4334)
T PRK05691 1275 LAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVWE-CFWPLITGCRLVLAGPGEHRDP 1353 (4334)
T ss_pred eEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHH-HHHHHhCCCEEEEcCccccCCH
Confidence 999999999999999999999999999988888899999999999999999988876 8899999999999753 24689
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCcc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLM 320 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~ 320 (431)
..+++.++++++|++.++|++++.+.+.... ..++++|.+++|||++++++.+.+.+.+ +++++|.||+||++..+
T Consensus 1354 ~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~---~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 1430 (4334)
T PRK05691 1354 QRIAELVQQYGVTTLHFVPPLLQLFIDEPLA---AACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINV 1430 (4334)
T ss_pred HHHHHHHHHcCCeEEECcHHHHHHHHhCccc---ccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeee
Confidence 9999999999999999999999998765322 2478999999999999999999999887 68999999999998776
Q ss_pred cCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccC--------Cceec
Q 014065 321 SSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF--------GWFHT 391 (431)
Q Consensus 321 ~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~--------g~~~T 391 (431)
+..... .......++|+|+ ++.++|+|+++++++.|+.|||+|+|+++++||+++++.+++.|.. +||+|
T Consensus 1431 ~~~~~~-~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrT 1509 (4334)
T PRK05691 1431 THWQCQ-AEDGERSPIGRPLGNVLCRVLDAELNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRT 1509 (4334)
T ss_pred eeeecc-cccCCCCcccceeCCCEEEEECCCCCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEc
Confidence 543221 1233456899999 7999999999999999999999999999999999999999988742 49999
Q ss_pred CceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 392 GDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 392 GD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+|++++||.++++||+|++||++|++|+|.|||.+.
T Consensus 1510 GDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l 1547 (4334)
T PRK05691 1510 GDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARL 1547 (4334)
T ss_pred cceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHH
Confidence 99999999999999999999999999999999999863
No 101
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=4.1e-56 Score=470.83 Aligned_cols=412 Identities=23% Similarity=0.288 Sum_probs=330.7
Q ss_pred ccHHHHHHHHHHhcCC-cceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 4 VTLIGLLNQVIDQFSS-KRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~-~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
.++.+.+.+.++++|+ +.++.+.+++++||+||+++++++|+.|++ |+++||+|+++++|+++++++++||+++|+++
T Consensus 631 ~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~ 709 (1140)
T PRK06814 631 RTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGRVP 709 (1140)
T ss_pred CCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCCEE
Confidence 5678889999999975 566654456799999999999999999975 99999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHH--HHHHHhcCcccccccccccchhh----hhhhccccccccccccC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAA--QAAASKLNISHATATLLDADSEL----TLSLAHSESDTNAISKL 156 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 156 (431)
+|++|..+.+++.+++++++++.++++++..+.. .............+...+..... .+..... .........
T Consensus 710 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 788 (1140)
T PRK06814 710 AMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLA-GRFPLVYFC 788 (1140)
T ss_pred EEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhh-ccCCccccC
Confidence 9999999999999999999999999987643321 11111111111111111100000 0000000 000001111
Q ss_pred CCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 157 TNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 157 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
...++++++++|||||||.||+|.++|+++..++......+++.++|++++.+|++|.+++...++.++..|+++++.+.
T Consensus 789 ~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~ 868 (1140)
T PRK06814 789 NRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPS 868 (1140)
T ss_pred CCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 34678999999999999999999999999999888888888999999999999999999997778999999999998763
Q ss_pred CCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccc
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEA 316 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~ 316 (431)
..+...+.+.++++++|++..+|++++.+.+... ..+++++|.+++||+++++++.+.+.+.+++++++.||+||+
T Consensus 869 -~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~---~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~ 944 (1140)
T PRK06814 869 -PLHYRIIPELIYDTNATILFGTDTFLNGYARYAH---PYDFRSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGVTET 944 (1140)
T ss_pred -cccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcc---cccccceeEEEEcCCcCCHHHHHHHHHHhCCcEEeccccccc
Confidence 4566778899999999999999999998876532 344789999999999999999999999999999999999999
Q ss_pred cCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhh-hcccCCceecCce
Q 014065 317 THLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANK-SAFLFGWFHTGDI 394 (431)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~-~~~~~g~~~TGD~ 394 (431)
+..+..+.. .....+++|+|. ++++++.+.++ .++.|||+++|++++.||+++++... ....+|||+|||+
T Consensus 945 ~~~~~~~~~---~~~~~~~vG~p~~g~~~~~~~~~~----~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl 1017 (1140)
T PRK06814 945 APVIALNTP---MHNKAGTVGRLLPGIEYRLEPVPG----IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDI 1017 (1140)
T ss_pred cceEEecCC---CCCCCCcCCccCCCCeEEEeecCC----CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCE
Confidence 877655432 234567899999 79999987543 35779999999999999998754322 2235799999999
Q ss_pred EEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 395 GYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 395 ~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
+++|+||++++.||.||+||++|++|+|.|||.+
T Consensus 1018 ~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~ 1051 (1140)
T PRK06814 1018 VTIDEEGFITIKGRAKRFAKIAGEMISLAAVEEL 1051 (1140)
T ss_pred EEECCCCeEEEEecccCeeeeCCEEECHHHHHHH
Confidence 9999999999999999999999999999999976
No 102
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-55 Score=427.81 Aligned_cols=409 Identities=23% Similarity=0.276 Sum_probs=329.9
Q ss_pred HHHHHhcCCcceEEec-CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCC
Q 014065 11 NQVIDQFSSKRALSVS-GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAY 89 (431)
Q Consensus 11 ~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 89 (431)
..+++++|+++|+++. +++.+||.||.++++++|++|++.|+++|++|+++++|+++++++++||+++|++++++++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~ 83 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHL 83 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecccccc
Confidence 4678899999999874 457899999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhh---hhhhccccccccccccCCCCCCCeEEE
Q 014065 90 TPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSEL---TLSLAHSESDTNAISKLTNDPSDVALF 166 (431)
Q Consensus 90 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i 166 (431)
+.+++.++++.++++.++++........+...........+......... .+.... .. . ........++.+++
T Consensus 84 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~-~~~~~~~~~~~a~i 159 (511)
T PRK13391 84 TPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAV--AG-L-PATPIADESLGTDM 159 (511)
T ss_pred CHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHh--cC-C-CCCCCCCcccccEE
Confidence 99999999999999999999876655544443322111111111100000 000000 00 0 01111234567899
Q ss_pred EeccCCCCCCCeeee--chHHHHH---HHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCCh
Q 014065 167 LHTSGTTSRPKGVPL--TQNNLAA---SVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSA 241 (431)
Q Consensus 167 ~~TSGtTG~pK~v~~--s~~~l~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~ 241 (431)
+|||||||.||+|.+ +|.++.. ........+++..+++++..+|++|..++.. .+.++..|+++++.+ .+++
T Consensus 160 l~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~-~~~~~~~g~~~~~~~--~~~~ 236 (511)
T PRK13391 160 LYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRA-VMLVIRLGGTVIVME--HFDA 236 (511)
T ss_pred EECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHH-HHHHHHcCceEEECC--CCCH
Confidence 999999999999995 4555432 2333455667888999999999999988866 677899999999987 6799
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCC-CCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~ 320 (431)
..+++.++++++|++.++|+++..+.+..... ...+++++|.+++||+++++++.+.+.+.++..+++.||+||++.+.
T Consensus 237 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~tE~~~~~ 316 (511)
T PRK13391 237 EQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAATEGLGFT 316 (511)
T ss_pred HHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccccccceE
Confidence 99999999999999999999999887654321 23347899999999999999999999998899999999999998765
Q ss_pred cCCCCCCCCCCCCCCccccccceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc--CCceecCceEEEc
Q 014065 321 SSNPLPEDGPHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL--FGWFHTGDIGYFD 398 (431)
Q Consensus 321 ~~~~~~~~~~~~~~~~G~~~~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~g~~~TGD~~~~~ 398 (431)
.... ......++++|+|+...++++|++|++++.|+.|||+++++ ++.||+++++.+...+. ++||+|||+|+++
T Consensus 317 ~~~~--~~~~~~~~~vG~~~~g~~~i~d~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~ 393 (511)
T PRK13391 317 ACDS--EEWLAHPGTVGRAMFGDLHILDDDGAELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVD 393 (511)
T ss_pred EecC--ccccccCCCcCCcccceEEEECCCCCCCCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEEC
Confidence 5432 22345567899999447999999999999999999999999 88999999988877764 3899999999999
Q ss_pred CCCeEEEecccccceecCCeeccccceeccc
Q 014065 399 SDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 399 ~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
++|++++.||.+|++|++|.+++|.|||.+.
T Consensus 394 ~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l 424 (511)
T PRK13391 394 EDGYLYLTDRAAFMIISGGVNIYPQEAENLL 424 (511)
T ss_pred CCccEEEeccCCCEEEeCCEEECHHHHHHHH
Confidence 9999999999999999999999999999863
No 103
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.9e-56 Score=437.02 Aligned_cols=415 Identities=26% Similarity=0.365 Sum_probs=327.5
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCC--CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhC
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGK--FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRAR 79 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~--~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 79 (431)
...|+.++|+..++++|+..++...++ +.+||.||+.+++++|++|++.|+++||+|+++++|+++++++++||+++|
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G 98 (579)
T PRK09192 19 DFPTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAG 98 (579)
T ss_pred chhhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcC
Confidence 456899999999998887665532222 679999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCC-------HHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccc
Q 014065 80 ATAAPLNAAYT-------PDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNA 152 (431)
Q Consensus 80 ~~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (431)
++++|+++..+ .+++.++++.++++++++++...+.+......... .. ... ... +... . ...
T Consensus 99 ~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~--~~--~~~-~~~--~~~~---~-~~~ 167 (579)
T PRK09192 99 LVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPL--LH--VLS-HAW--FKAL---P-EAD 167 (579)
T ss_pred CeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccc--cc--eee-hhh--hccc---C-CCc
Confidence 99999976543 57899999999999999988765554443211110 00 000 000 0000 0 001
Q ss_pred cccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH-HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEE
Q 014065 153 ISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS-VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAV 231 (431)
Q Consensus 153 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~ 231 (431)
.......++++++++|||||||.||+|.++|.+++..+..... .+++.++|+++..+|++|.+++...++.++..|+++
T Consensus 168 ~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~ 247 (579)
T PRK09192 168 VALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSV 247 (579)
T ss_pred cccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCee
Confidence 1112345689999999999999999999999999988887776 788999999999999999999988788889999998
Q ss_pred EeCCCCCC--ChhhHHHHHHHhcceeeecchHHHHHHHhcccCC--CCCCCCCccEEEeccCCCcHHHHHHHHHHhC---
Q 014065 232 TLPAAGRF--SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK--PEPVYPKLRFIRSCSASLAPVILSRLEEAFG--- 304 (431)
Q Consensus 232 ~~~~~~~~--~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~--~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~--- 304 (431)
++.+...+ ++..+++.+.+++++.++..|..+..+....... ...+++++|.+++||+++++.+.+.+.+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g 327 (579)
T PRK09192 248 DYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAG 327 (579)
T ss_pred EeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcC
Confidence 76552222 6888999999999998777655555554332211 1245789999999999999999999988873
Q ss_pred ---CceecccCcccccCcccCCCCCCCC-------------------------CCCCCCccccc-cceEEEECCCCCcCC
Q 014065 305 ---APVLEAYAMTEATHLMSSNPLPEDG-------------------------PHKPGSVGRPV-GQEIAILDEIGVPQE 355 (431)
Q Consensus 305 ---~~i~~~yg~tE~~~~~~~~~~~~~~-------------------------~~~~~~~G~~~-~~~~~i~d~~~~~~~ 355 (431)
..+++.||+||++..++........ .....++|+|+ +.+++|+|+++..++
T Consensus 328 ~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d~~~~~~~ 407 (579)
T PRK09192 328 FDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRNEAGMPLP 407 (579)
T ss_pred CChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEECCCCCCCC
Confidence 3489999999998766544321100 01124789999 899999999999999
Q ss_pred CCceeeEEEeCCccccccccCcchhhhcc-cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 356 GGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 356 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.++.|||+++|+.++.||+++ +.+.+.+ .+|||+|||+|++ ++|+++++||.+|+||++|++|+|.|||.+.
T Consensus 408 ~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l 480 (579)
T PRK09192 408 ERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIA 480 (579)
T ss_pred CCCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHH
Confidence 999999999999999999998 4444444 5799999999999 9999999999999999999999999999763
No 104
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.2e-55 Score=427.78 Aligned_cols=419 Identities=23% Similarity=0.320 Sum_probs=327.4
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
.++..+.|++.++.+|+++|+...+ .++||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~a~~~~~-~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~ 95 (545)
T PRK08162 17 PLTPLSFLERAAEVYPDRPAVIHGD-RRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVL 95 (545)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEECC-eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEE
Confidence 3578899999999999999998755 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccch---------hhhhhhcccccccccc
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADS---------ELTLSLAHSESDTNAI 153 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 153 (431)
+|+++..+.+++.++++.++++.++++.+..+...+........... .+..... ...+............
T Consensus 96 vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (545)
T PRK08162 96 NTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPL-VIDVDDPEYPGGRFIGALDYEAFLASGDPDFA 174 (545)
T ss_pred eccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceE-EEecCccccccCCCcccccHHHHhccCCcccc
Confidence 99999999999999999999999999988766655443322211111 1110000 0000000000001111
Q ss_pred ccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEe
Q 014065 154 SKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTL 233 (431)
Q Consensus 154 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 233 (431)
.......++.++++|||||||.||+|.++|.++............+..+++.++.+|++|.+++...++..+..| +.++
T Consensus 175 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g-~~~~ 253 (545)
T PRK08162 175 WTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAARAG-TNVC 253 (545)
T ss_pred ccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHHHcc-EEEE
Confidence 111233457899999999999999999999988766665556667888899999999999998876555555544 4444
Q ss_pred CCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCc
Q 014065 234 PAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAM 313 (431)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~ 313 (431)
.. .+++..+++.++++++|++.++|++++.+++..... ...+.+.+.++++|+.++++..+.+.+ +++++++.||+
T Consensus 254 ~~--~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~YG~ 329 (545)
T PRK08162 254 LR--KVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEW-RAGIDHPVHAMVAGAAPPAAVIAKMEE-IGFDLTHVYGL 329 (545)
T ss_pred eC--CCCHHHHHHHHHHcCCeEEEechHHHHHHHhCcccc-ccCCccceEEEECCCCCCHHHHHHHHH-hCCceeecccc
Confidence 44 579999999999999999999999999998765432 222456667789999999999998876 48999999999
Q ss_pred ccccCcccCCCCCCCC--------CCCCCCccccc--cceEEEECC-CCCcCCC-C-ceeeEEEeCCccccccccCcchh
Q 014065 314 TEATHLMSSNPLPEDG--------PHKPGSVGRPV--GQEIAILDE-IGVPQEG-G-AKGEVCIRGPNVTKGYKNNPEAN 380 (431)
Q Consensus 314 tE~~~~~~~~~~~~~~--------~~~~~~~G~~~--~~~~~i~d~-~~~~~~~-~-~~Gel~v~~~~~~~gy~~~~~~~ 380 (431)
||+++.+..+...... .....+.|.+. +..++++|+ ++.+++. | +.|||+++|+.++.||+++++.+
T Consensus 330 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~ 409 (545)
T PRK08162 330 TETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPKAT 409 (545)
T ss_pred cccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCChhhh
Confidence 9986544433211100 11234556654 356888894 6788865 3 46999999999999999999999
Q ss_pred hhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 381 KSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 381 ~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
...|.+|||+|||++++|+||+++++||.+|++|.+|++++|.|||.+
T Consensus 410 ~~~~~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~ 457 (545)
T PRK08162 410 EEAFAGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDV 457 (545)
T ss_pred HHHhhCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHH
Confidence 999999999999999999999999999999999999999999999975
No 105
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=5.2e-55 Score=425.23 Aligned_cols=406 Identities=23% Similarity=0.321 Sum_probs=338.8
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
+++.++|++.|+.+|+++++...+ +++||+||.++++++|.+|.+.|+.+|++|+++++|+.+++++++||+++|++++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~-~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~ 80 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLG-EKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYI 80 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCC-cEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEe
Confidence 468899999999999999998654 6999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCe
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDV 163 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (431)
|+++..+.+++.++++..++++++++.+..... ... ..+... .+..... ............++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~ 145 (503)
T PRK04813 81 PVDVSSPAERIEMIIEVAKPSLIIATEELPLEI------LGI--PVITLD------ELKDIFA-TGNPYDFDHAVKGDDN 145 (503)
T ss_pred cCCCCChHHHHHHHHHhcCCCEEEecccccccc------cCC--cEEehH------Hhhhhhh-ccccccccccCCCCCc
Confidence 999999999999999999999999987641100 000 000000 0000000 0011111233467889
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-CCChh
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG-RFSAS 242 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~~ 242 (431)
++++|||||||.||+|.++|.++..........+++..+++++...|++|..++.. ++.++..|+++++.+.. ..++.
T Consensus 146 ~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~g~~~v~~~~~~~~~~~ 224 (503)
T PRK04813 146 YYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMD-LYPTLASGGTLVALPKDMTANFK 224 (503)
T ss_pred EEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHH-HHHHHhcCCEEEEcChhhhcCHH
Confidence 99999999999999999999999988887778888999999999999999988766 78899999999987742 24789
Q ss_pred hHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCccc
Q 014065 243 TFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLMS 321 (431)
Q Consensus 243 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~ 321 (431)
.+++.+++++++.+..+|++++.+...... ....++++|.++++|+++++.+.+++.+.+ ++.+++.||+||++..++
T Consensus 225 ~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~-~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~ 303 (503)
T PRK04813 225 QLFETLPQLPINVWVSTPSFADMCLLDPSF-NEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVT 303 (503)
T ss_pred HHHHHHHHcCCeEEEeChHHHHHHHHhhcc-CcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEE
Confidence 999999999999999999999887655432 234578999999999999999999999998 788999999999976554
Q ss_pred CCCCCC--CCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc--C--CceecCce
Q 014065 322 SNPLPE--DGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL--F--GWFHTGDI 394 (431)
Q Consensus 322 ~~~~~~--~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~--g~~~TGD~ 394 (431)
...... .......++|+|. +.+++|+|++|.+++.|+.|||+++++.++.||+++++.+...|. + +||+|||+
T Consensus 304 ~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~ 383 (503)
T PRK04813 304 SIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDA 383 (503)
T ss_pred EEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCce
Confidence 332211 1234456799998 899999999999999999999999999999999999988887763 3 49999999
Q ss_pred EEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 395 GYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 395 ~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
+++ ++|++++.||.+|+|+.+|++++|.+||.+
T Consensus 384 ~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~ 416 (503)
T PRK04813 384 GYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQN 416 (503)
T ss_pred EEe-eCCeEEEeccccceEEECcEEeCHHHHHHH
Confidence 999 999999999999999999999999999975
No 106
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.7e-55 Score=417.37 Aligned_cols=382 Identities=26% Similarity=0.409 Sum_probs=319.8
Q ss_pred cHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecC
Q 014065 32 TYSRIHELVERAASRLVA-AGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 32 Ty~el~~~~~~~a~~L~~-~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++.++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred CchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHH
Q 014065 111 EGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASV 190 (431)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~ 190 (431)
+.......... ..... ..... .... ..............+++++++|||||||.||+|.++|.++...+
T Consensus 81 ~~~~~~~~~~~------~~~~~-~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~ 149 (408)
T TIGR01733 81 ALASRLAGLVL------PIILV-DPLEL---AALD-DAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLL 149 (408)
T ss_pred chhhhccccCC------ceEEe-chhhh---hhcc-cccccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHH
Confidence 75443322110 00000 00000 0000 00011111111457899999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCC-ChhhHHHHHHHhcceeeecchHHHHHHHhc
Q 014065 191 SNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRF-SASTFWQDMIKYNATWYTAVPTIHQIVLDR 269 (431)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~-~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 269 (431)
..+...+++.+++++++..|++|.+++.. ++.++..|+++++.+.... .+..+.+.+++++++.+.++|.+++.+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 150 AWLARRYGLDPDDRVLQFASLSFDASVEE-IFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred HHHHHhcCCCCCceEEEecCCccchhHHH-HHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 98888889999999999999999998765 8999999999998774222 367889999999999999999999999887
Q ss_pred ccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhC-CceecccCcccccCcccCCCCCCCCCC--CCCCccccc-cceEE
Q 014065 270 HVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFG-APVLEAYAMTEATHLMSSNPLPEDGPH--KPGSVGRPV-GQEIA 345 (431)
Q Consensus 270 ~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~-~~i~~~yg~tE~~~~~~~~~~~~~~~~--~~~~~G~~~-~~~~~ 345 (431)
.. ..++++|.++.+|+++++++++.+.+.++ +.+++.||+||+++++........... .+.++|.|+ +++++
T Consensus 229 ~~----~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 304 (408)
T TIGR01733 229 LP----PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLY 304 (408)
T ss_pred hh----hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEE
Confidence 54 34789999999999999999999999997 899999999999987753332222222 278899999 89999
Q ss_pred EECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccC-------C--ceecCceEEEcCCCeEEEecccccceecC
Q 014065 346 ILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF-------G--WFHTGDIGYFDSDGYLHLVGRIKELINRG 416 (431)
Q Consensus 346 i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------g--~~~TGD~~~~~~~g~l~~~gR~~d~i~~~ 416 (431)
|+|+++++++.|+.|||++++++++.||+++++.+.+.|.. | ||+|||++++|++|++++.||.+|+|+.+
T Consensus 305 i~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~ 384 (408)
T TIGR01733 305 VLDDDLRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIR 384 (408)
T ss_pred EECCCCCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeC
Confidence 99988999999999999999999999999998888777643 2 99999999999999999999999999999
Q ss_pred Ceeccccceeccc
Q 014065 417 GNLHESISLFLAK 429 (431)
Q Consensus 417 G~~i~~~~iE~a~ 429 (431)
|++++|.|||.+.
T Consensus 385 G~~v~~~~ie~~l 397 (408)
T TIGR01733 385 GYRIELGEIEAAL 397 (408)
T ss_pred eEEechHHHHHHH
Confidence 9999999999763
No 107
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-55 Score=426.78 Aligned_cols=416 Identities=25% Similarity=0.313 Sum_probs=326.2
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..||.+++++.|+++|+++|+.+.+ +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~l~~~~~~~a~~~p~~~a~~~~~-~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~ 80 (533)
T PRK07798 2 AWNIADLFEAVADAVPDRVALVCGD-RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVP 80 (533)
T ss_pred cccHHHHHHHHHHhCCCceEEEECC-ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEE
Confidence 4689999999999999999998754 799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccch------hhhhhhccccccccccccC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADS------ELTLSLAHSESDTNAISKL 156 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 156 (431)
+|+++.++.+++.++++.++++.++++........+...........+.+.+... ...+........ . ....
T Consensus 81 v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 158 (533)
T PRK07798 81 VNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGS-P-ERDF 158 (533)
T ss_pred EecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccC-C-cCCC
Confidence 9999999999999999999999999998766555544322111111111111110 001111000000 0 1111
Q ss_pred CCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH---------hcC------CCCCeEEEecChhhHHHHHHHH
Q 014065 157 TNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV---------YKL------TESDSTVIVLPLFHVHGMLAGL 221 (431)
Q Consensus 157 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---------~~~------~~~~~~~~~~p~~~~~~~~~~~ 221 (431)
.....+.++++|||||||.||+|+++|.++.......... ..+ ..+++++..+|++|..+++. +
T Consensus 159 ~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~-~ 237 (533)
T PRK07798 159 GERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQWA-A 237 (533)
T ss_pred CCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhHHH-H
Confidence 1223345789999999999999999999987654432221 111 56788999999999999985 8
Q ss_pred HHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHH-HHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHH
Q 014065 222 LSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQI-VLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLE 300 (431)
Q Consensus 222 ~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~-l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~ 300 (431)
+.+++.|+++++.+...+++..+++.++++++|.+.++|..+.. +.+........+++++|.+++||+++++++.+++.
T Consensus 238 ~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~~~~~~ 317 (533)
T PRK07798 238 FAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSVKEALL 317 (533)
T ss_pred HHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHHHHHHH
Confidence 89999999999987546789999999999999999999876543 33333212234578999999999999999999999
Q ss_pred HHh-CCceecccCcccccCcccCCCCCCCCCCCCCCcc--ccc-cceEEEECCCCCcCCCCce--eeEEEeCCccccccc
Q 014065 301 EAF-GAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVG--RPV-GQEIAILDEIGVPQEGGAK--GEVCIRGPNVTKGYK 374 (431)
Q Consensus 301 ~~~-~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G--~~~-~~~~~i~d~~~~~~~~~~~--Gel~v~~~~~~~gy~ 374 (431)
+.+ +..+++.||+||++.+...... ......| ++. +..++++|+++++++.|+. |+++ .++.+..||+
T Consensus 318 ~~~~~~~~~~~YG~tE~~~~~~~~~~-----~~~~~~g~~~~~~~~~~~i~~~~~~~~~~g~~~~g~l~-~~~~~~~gy~ 391 (533)
T PRK07798 318 ELLPNVVLTDSIGSSETGFGGSGTVA-----KGAVHTGGPRFTIGPRTVVLDEDGNPVEPGSGEIGWIA-RRGHIPLGYY 391 (533)
T ss_pred HHcCCCeEEeeecccccccccccCCC-----CCCccCCCCccCCCceEEEECCCCCCCCCCCCCeeEEE-eecCcccccc
Confidence 988 7899999999999765544321 1112233 555 7899999999999998887 6665 5567899999
Q ss_pred cCcchhhhcccC----CceecCceEEEcCCCeEEEecccccceecCCeeccccceecc
Q 014065 375 NNPEANKSAFLF----GWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 375 ~~~~~~~~~~~~----g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
+++..+++.|.. +||+|||++++|++|++++.||.+|+||.+|++|+|.|||.+
T Consensus 392 ~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~ 449 (533)
T PRK07798 392 KDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEA 449 (533)
T ss_pred CChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHH
Confidence 999888887742 599999999999999999999999999999999999999976
No 108
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.6e-55 Score=426.71 Aligned_cols=410 Identities=25% Similarity=0.292 Sum_probs=328.4
Q ss_pred cHHHHHHHHHHhcCCcceEEecC-CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSG-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
++.+.|...|..+|+.+++...+ ++.+||.||+++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 47888889999999999997654 36899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHH-------HHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccC
Q 014065 84 PLNAAYTPDE-------FEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKL 156 (431)
Q Consensus 84 ~l~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (431)
++++..+.++ +.++++.++++.+++++.......... .... ....+.+ +.. .. .....
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~--~~~~~~~------l~~---~~---~~~~~ 147 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLE-EKGI--RVLTVAD------LLA---AD---PIDPV 147 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhc-ccCC--ceeehhh------hcc---cC---CCCcC
Confidence 9998877544 455678899999999876443322211 1010 0000000 000 00 01122
Q ss_pred CCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCC-CeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 157 TNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTES-DSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 157 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
...++++++++|||||||.||+|.++|.++...+.......++.++ +++++.+|++|..++...+..++..|+++++.+
T Consensus 148 ~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 227 (545)
T PRK07768 148 ETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVT 227 (545)
T ss_pred CCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeC
Confidence 4457899999999999999999999999999888887777888876 899999999999999887888899999998765
Q ss_pred CCC--CChhhHHHHHHHhcceeeecchHHHHHHHhcccC---CCCCCCCCccEEEeccCCCcHHHHHHHHHH---hCC--
Q 014065 236 AGR--FSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA---KPEPVYPKLRFIRSCSASLAPVILSRLEEA---FGA-- 305 (431)
Q Consensus 236 ~~~--~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~---~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~---~~~-- 305 (431)
+.. .++..+++.+++++++++...|..+..+.+.... ....+++++|.++.+|++++++..+.+.+. ++.
T Consensus 228 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 307 (545)
T PRK07768 228 PMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRP 307 (545)
T ss_pred HHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCc
Confidence 322 2677889999999999998888877766554321 113457899999999999999999999875 454
Q ss_pred -ceecccCcccccCcccCCCCCC-----------------------CCCCCCCCccccc-cceEEEECCCCCcCCCCcee
Q 014065 306 -PVLEAYAMTEATHLMSSNPLPE-----------------------DGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKG 360 (431)
Q Consensus 306 -~i~~~yg~tE~~~~~~~~~~~~-----------------------~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~G 360 (431)
.+++.||+||++..+....... ......+++|+|+ +.+++++|+++++++.++.|
T Consensus 308 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~~~~~~g~~G 387 (545)
T PRK07768 308 EAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVDEDGQVLPPRGVG 387 (545)
T ss_pred ccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEECCCCCCCCCCCEE
Confidence 4999999999987654332110 0022346899999 89999999999999999999
Q ss_pred eEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 361 EVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 361 el~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+++|+.++.||++.+........+|||+|||+++++++|+++++||.+|+||++|++|+|.|||.+.
T Consensus 388 el~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l 456 (545)
T PRK07768 388 VIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAA 456 (545)
T ss_pred EEEEccCcccccccCCCCCcccccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHH
Confidence 999999999999998665554445678999999999999999999999999999999999999999863
No 109
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.8e-54 Score=420.11 Aligned_cols=394 Identities=25% Similarity=0.337 Sum_probs=320.4
Q ss_pred eEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcC
Q 014065 22 ALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDS 101 (431)
Q Consensus 22 a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 101 (431)
|++. +++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.+++.++++.+
T Consensus 4 ~~~~-~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 82 (509)
T PRK12406 4 TIIS-GDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDS 82 (509)
T ss_pred EEEE-CCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhcc
Confidence 4554 457999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCchhHHHHHHHhcCcccccccccccc-----------------hhhhhhhccccccccccccCCCCCCCeE
Q 014065 102 ESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD-----------------SELTLSLAHSESDTNAISKLTNDPSDVA 164 (431)
Q Consensus 102 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (431)
++++++++......+....... ...+...... ....+.... ...........++++
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a 155 (509)
T PRK12406 83 GARVLIAHADLLHGLASALPAG---VTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWL----AQQEPYDGPPVPQPQ 155 (509)
T ss_pred CCcEEEEccchhhhhhhhhhcc---cceeecccccccccccccccccccCCCCccCHHHHh----cccCccCCCCCCCce
Confidence 9999999877555433222110 0000000000 000000000 000111233568999
Q ss_pred EEEeccCCCCCCCeeeechHHH---HHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCCh
Q 014065 165 LFLHTSGTTSRPKGVPLTQNNL---AASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSA 241 (431)
Q Consensus 165 ~i~~TSGtTG~pK~v~~s~~~l---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~ 241 (431)
+++|||||||.||+|.++|... ..........+++.++++++..+|++|..+... .+.++..|+++++.+ .+++
T Consensus 156 ~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~--~~~~ 232 (509)
T PRK12406 156 SMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAY-GLRAGRLGGVLVLQP--RFDP 232 (509)
T ss_pred EEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHH-HHHHHhhheEEEEcc--CCCH
Confidence 9999999999999999876553 333444556778899999999999999988766 445678899998876 6789
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~ 320 (431)
..+++.++++++|.+.++|+++..+++.... ....+++++|.++.||+++++++.+++.+.+++.+++.||+||++.++
T Consensus 233 ~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 312 (509)
T PRK12406 233 EELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVT 312 (509)
T ss_pred HHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceE
Confidence 9999999999999999999999999875432 123457899999999999999999999998999999999999999866
Q ss_pred cCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCcccc-ccccCcchhhhcccCCceecCceEEEc
Q 014065 321 SSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTK-GYKNNPEANKSAFLFGWFHTGDIGYFD 398 (431)
Q Consensus 321 ~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~-gy~~~~~~~~~~~~~g~~~TGD~~~~~ 398 (431)
.... .+....++++|+|+ +.+++++|+++++++.|+.|||+++++.++. ||+++++.+...+.++||+|||++++|
T Consensus 313 ~~~~--~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~ 390 (509)
T PRK12406 313 FATS--EDALSHPGTVGKAAPGAELRFVDEDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLD 390 (509)
T ss_pred ecCc--ccccccCCCcCccCCCcEEEEECCCCCCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEc
Confidence 5443 22345567899999 8999999999999999999999999998875 899988888877788999999999999
Q ss_pred CCCeEEEecccccceecCCeeccccceecc
Q 014065 399 SDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 399 ~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
++|++++.||.+|+||++|.+|+|.+||.+
T Consensus 391 ~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~ 420 (509)
T PRK12406 391 ADGYLFLCDRKRDMVISGGVNIYPAEIEAV 420 (509)
T ss_pred CCceEEEeecccceEEECCEEECHHHHHHH
Confidence 999999999999999999999999999986
No 110
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-54 Score=419.83 Aligned_cols=395 Identities=26% Similarity=0.302 Sum_probs=319.9
Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceE
Q 014065 26 SGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 26 ~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
.+++++||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++.
T Consensus 7 ~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ 86 (502)
T PRK08276 7 PSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKV 86 (502)
T ss_pred CCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCE
Confidence 44589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCchhHHHHHHHhcCcccccccccccc--hhhhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeech
Q 014065 106 LLTPAEGNAAAQAAASKLNISHATATLLDAD--SELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQ 183 (431)
Q Consensus 106 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~ 183 (431)
+++++.......+..+........+...+.. ....+....... ........++.++++|||||||.||+|.++|
T Consensus 87 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~i~~TSGtTG~PK~v~~~~ 162 (502)
T PRK08276 87 LIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAAQ----PDTPIADETAGADMLYSSGTTGRPKGIKRPL 162 (502)
T ss_pred EEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhcC----CCCCCCCCCcceEEEECCCCCCCCceEEEcc
Confidence 9999876665554433322111111111100 000111100000 1111234567899999999999999999988
Q ss_pred HHHHHHH------HHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeee
Q 014065 184 NNLAASV------SNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYT 257 (431)
Q Consensus 184 ~~l~~~~------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 257 (431)
.++.... ...........++++++.+|++|..++.. .+.++..|+++++.+ .+++..+++.++++++|++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~~~ 239 (502)
T PRK08276 163 PGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVME--KFDAEEALALIERYRVTHSQ 239 (502)
T ss_pred CCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcC--CCCHHHHHHHHHHhCCeEEE
Confidence 7654322 11122222346788999999999998877 557899999998877 67899999999999999999
Q ss_pred cchHHHHHHHhcccCC-CCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCc
Q 014065 258 AVPTIHQIVLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSV 336 (431)
Q Consensus 258 ~~p~~~~~l~~~~~~~-~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~ 336 (431)
++|+++..+++..... ...+++++|.++++|+++++++.+++.+.++..+++.||+||++.++..... ......+++
T Consensus 240 ~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~--~~~~~~~~~ 317 (502)
T PRK08276 240 LVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGGGVTVITSE--DWLAHPGSV 317 (502)
T ss_pred ehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhcccccccceeEecCc--cccccCCCc
Confidence 9999999998765432 2345789999999999999999999999889899999999999986655432 233456789
Q ss_pred cccccceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccC-CceecCceEEEcCCCeEEEecccccceec
Q 014065 337 GRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF-GWFHTGDIGYFDSDGYLHLVGRIKELINR 415 (431)
Q Consensus 337 G~~~~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGD~~~~~~~g~l~~~gR~~d~i~~ 415 (431)
|+|++..++++|+++.+++.|+.|||+++|+.++.||+++++.+...+.+ +||+|||+++++++|.+++.||.+|++|+
T Consensus 318 G~~~~~~~~i~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~ 397 (502)
T PRK08276 318 GKAVLGEVRILDEDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIIS 397 (502)
T ss_pred ceecccEEEEECCCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEEe
Confidence 99997799999988999999999999999999999999999988888865 99999999999999999999999999999
Q ss_pred CCeeccccceeccc
Q 014065 416 GGNLHESISLFLAK 429 (431)
Q Consensus 416 ~G~~i~~~~iE~a~ 429 (431)
+|.+|+|.+||.+-
T Consensus 398 ~G~~v~~~~iE~~i 411 (502)
T PRK08276 398 GGVNIYPQEIENLL 411 (502)
T ss_pred CCEEeCHHHHHHHH
Confidence 99999999999863
No 111
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=8.3e-55 Score=406.82 Aligned_cols=418 Identities=26% Similarity=0.333 Sum_probs=341.5
Q ss_pred HHHHHHh-cCCcceEEecC-----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 10 LNQVIDQ-FSSKRALSVSG-----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 10 l~~~a~~-~p~~~a~~~~~-----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
+++..+. .++.++.++.+ ...+||.|+.+++.++|..|...|+++||+|++++|+.++++++++||+++|++..
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~ 149 (626)
T KOG1175|consen 70 LDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHS 149 (626)
T ss_pred hhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEE
Confidence 3344333 47888888752 24589999999999999999988999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhH---------HHHHHHhcCcc----cccccccccchhhhhhhccccccc
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA---------AQAAASKLNIS----HATATLLDADSELTLSLAHSESDT 150 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 150 (431)
++....+.+++...++.++++++++.+..... ..+........ ...+.+....... +.........
T Consensus 150 ~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~a~ 228 (626)
T KOG1175|consen 150 SVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDL-FWSLELKKAS 228 (626)
T ss_pred EeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccc-cHHHHhhhcC
Confidence 99999999999999999999999998752211 11221111110 0000011111111 1111111122
Q ss_pred cccccCCCCCCCeEEEEeccCCCCCCCeeeechHH-HHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCC
Q 014065 151 NAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNN-LAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGA 229 (431)
Q Consensus 151 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~-l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~ 229 (431)
...+....+.+++.+|+|||||||.||++.+++.. ++..+......+++.+.|++++.....|+.+.+..++++|..|+
T Consensus 229 ~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga 308 (626)
T KOG1175|consen 229 PEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGA 308 (626)
T ss_pred CCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCc
Confidence 22235667789999999999999999999998876 55666677788899999999999999999999998999999999
Q ss_pred EEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCC-CCCCCCccEEEeccCCCcHHHHHHHHHHhCC-ce
Q 014065 230 AVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP-EPVYPKLRFIRSCSASLAPVILSRLEEAFGA-PV 307 (431)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~-~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~-~i 307 (431)
++++.+...+++..+++.+.++++|+++..|+.++.+.+...... ...+++||++.+.||++.++.+.++.+.++. +|
T Consensus 309 ~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv 388 (626)
T KOG1175|consen 309 TVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPI 388 (626)
T ss_pred EEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccch
Confidence 999988777799999999999999999999999998877655432 3334789999999999999999999999987 59
Q ss_pred ecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCC-ceeeEEEeC--C-ccccccccCcchhhh
Q 014065 308 LEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGG-AKGEVCIRG--P-NVTKGYKNNPEANKS 382 (431)
Q Consensus 308 ~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~-~~Gel~v~~--~-~~~~gy~~~~~~~~~ 382 (431)
++.||+||+|..+..+..... ...+++.+.|. |+++.|+|++|++++.+ +.|+|+++. | +++++|+++++....
T Consensus 389 ~e~~~qtEtG~~~i~~~~g~~-p~~pg~~~~p~~g~~v~i~de~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~ 467 (626)
T KOG1175|consen 389 YETYGQTETGGICITPKPGKL-PIKPGSAGKPFPGYDVQILDENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRA 467 (626)
T ss_pred hhceeeeccCceeeeccCCCC-CcCccccCCCCCCcceEEECCCCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhh
Confidence 999999999999888776443 68899999999 99999999999999887 889999998 3 778999999985555
Q ss_pred cc-c--CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 383 AF-L--FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 383 ~~-~--~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.+ . .|||.|||.+++|+||++|+.||.||+|+++|.++++.|||.|-
T Consensus 468 ~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al 517 (626)
T KOG1175|consen 468 AYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESAL 517 (626)
T ss_pred hhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHH
Confidence 43 3 59999999999999999999999999999999999999999884
No 112
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=7.4e-54 Score=411.45 Aligned_cols=369 Identities=24% Similarity=0.318 Sum_probs=310.2
Q ss_pred cHHHHH-HHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 5 TLIGLL-NQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 5 tl~~~l-~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
++.+.+ ...++++|+++|+.+. ++++||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~-~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v 81 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLN-DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVL 81 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecC-CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEe
Confidence 344444 4568999999999864 47999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCe
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDV 163 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (431)
|+++..+.+++..+++.+++++++++.+.... .. ..... .. . ..........++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~------~~~~~-----------~~--~----~~~~~~~~~~~~~~ 137 (458)
T PRK09029 82 PLNPQLPQPLLEELLPSLTLDFALVLEGENTF-SA------LTSLH-----------LQ--L----VEGAHAVAWQPQRL 137 (458)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEEcCcccch-hh------ccccc-----------cc--c----ccccCcccCCCCCe
Confidence 99999999999999999999999998764321 00 00000 00 0 00011223457889
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhh
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAST 243 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 243 (431)
++++|||||||.||+|.++|.+++..+......++..++++++..+|++|.+++.. ++.++..|+++++.+. ..
T Consensus 138 a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~-~~~~l~~G~~v~~~~~-----~~ 211 (458)
T PRK09029 138 ATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGI-VWRWLYAGATLVVRDK-----QP 211 (458)
T ss_pred EEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHH-HHHHHhCCceEEeCCh-----HH
Confidence 99999999999999999999999999888888889999999999999999999865 7788999999998762 45
Q ss_pred HHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCC
Q 014065 244 FWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSN 323 (431)
Q Consensus 244 ~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~ 323 (431)
+++.+ .+++.+..+|+++..++..... ..++|.+++||+++++.+.+.+.+ ++.++++.||+||++...+..
T Consensus 212 ~~~~i--~~~t~~~~~P~~~~~l~~~~~~-----~~~l~~i~~gG~~~~~~~~~~~~~-~g~~~~~~YG~tE~~~~~~~~ 283 (458)
T PRK09029 212 LEQAL--AGCTHASLVPTQLWRLLDNRSE-----PLSLKAVLLGGAAIPVELTEQAEQ-QGIRCWCGYGLTEMASTVCAK 283 (458)
T ss_pred HHHHH--hhceeeecChHHHHHHHhcccc-----CCcceEEEECCCCCCHHHHHHHHH-cCCcEeccccccccCcceecc
Confidence 66777 3789999999999998765432 347999999999999999999875 499999999999998765443
Q ss_pred CCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCe
Q 014065 324 PLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGY 402 (431)
Q Consensus 324 ~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~ 402 (431)
.. ....++|+|+ ++++++++ |||+++|+.++.||+++++.+.....+|||+|||+|++| ||+
T Consensus 284 ~~-----~~~~~~G~~~~~~~~~i~~-----------gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~-~g~ 346 (458)
T PRK09029 284 RA-----DGLAGVGSPLPGREVKLVD-----------GEIWLRGASLALGYWRQGQLVPLVNDEGWFATRDRGEWQ-NGE 346 (458)
T ss_pred CC-----CCCCCCCCCCCCCEEEEeC-----------CEEEEecCceeeeeecCccccccccCCCccCCCCcEEEe-CCE
Confidence 22 1235699999 79999987 899999999999999988877655567999999999999 999
Q ss_pred EEEecccccceecCCeeccccceeccc
Q 014065 403 LHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 403 l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+++.||++|+||++|.+|+|.|||.+.
T Consensus 347 l~~~gR~~d~i~~~G~~v~p~eiE~~l 373 (458)
T PRK09029 347 LTILGRLDNLFFSGGEGIQPEEIERVI 373 (458)
T ss_pred EEEecccccceeeCCEEeCHHHHHHHH
Confidence 999999999999999999999999863
No 113
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-53 Score=439.36 Aligned_cols=402 Identities=19% Similarity=0.233 Sum_probs=309.9
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
..+|+.++|++.++++|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+|+++|+++++++++||+++|++
T Consensus 445 ~~~sl~~ll~~~a~~~pd~~Al~~~~-~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav 523 (994)
T PRK07868 445 TRISLGRIIAEQARDAPKGEFLLFDG-RVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAV 523 (994)
T ss_pred CCccHHHHHHHHHHHCCCCeEEEeCC-ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCE
Confidence 45789999999999999999999755 69999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc----------hhhhhhhccccc-c-
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD----------SELTLSLAHSES-D- 149 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-~- 149 (431)
++|++|. +++.++++.++++++|++++..+..... . ...+.+.... ....+....... .
T Consensus 524 ~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~----~--~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (994)
T PRK07868 524 AVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL----P--GRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVEL 594 (994)
T ss_pred EEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc----C--ceEEEecCCccccccCCcchhhhhhhhcCcccccC
Confidence 9999985 6799999999999999987655433221 1 1111111100 000000000000 0
Q ss_pred ccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCC
Q 014065 150 TNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGA 229 (431)
Q Consensus 150 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~ 229 (431)
..........++++++++|| ||||.||++.++|.++..........+++.++|++++.+|++|.+++...++.++..|+
T Consensus 595 ~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~ 673 (994)
T PRK07868 595 PGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGS 673 (994)
T ss_pred CcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccce
Confidence 00000112235889999998 57777888778887766555555566788899999999999999999886667777777
Q ss_pred EEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhC-Ccee
Q 014065 230 AVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFG-APVL 308 (431)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~-~~i~ 308 (431)
++++.+ .+++..+++.|+++++|+++++|++++.+++.... ...+++++|.++ |+.+++++++++.+.++ +.++
T Consensus 674 ~vvl~~--~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~-~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~ 748 (994)
T PRK07868 674 RIALSR--GLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAF-VLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVV 748 (994)
T ss_pred EEEecC--CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCC-ccCCCCceEEEe--cCCCCHHHHHHHHHHhCchhee
Confidence 777776 68999999999999999999999999999876432 223467899766 34599999999999985 8899
Q ss_pred cccCcccccCcccCCCCCCCCCCCCCCccccc-cc-eEEEE-----------CCCC--CcCCCCceeeEEEeCCcccccc
Q 014065 309 EAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQ-EIAIL-----------DEIG--VPQEGGAKGEVCIRGPNVTKGY 373 (431)
Q Consensus 309 ~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~-~~~i~-----------d~~~--~~~~~~~~Gel~v~~~~~~~gy 373 (431)
+.||+||++..... . ....++++|+|+ +. ++++. |++| +.++.|+.|||+++++..
T Consensus 749 ~~YG~TE~~~~~~~-~----~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~---- 819 (994)
T PRK07868 749 EFFATTDGQAVLAN-V----SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP---- 819 (994)
T ss_pred eeeecccccccccc-c----CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCC----
Confidence 99999998754432 1 124567999999 65 56553 4556 568889999999999753
Q ss_pred ccCcchh--hhccc--CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 374 KNNPEAN--KSAFL--FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 374 ~~~~~~~--~~~~~--~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
. +++.+ +..|. +|||+|||+|++|+||+|+|+||+||+||++|.+|+|.|||.+.
T Consensus 820 ~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L 878 (994)
T PRK07868 820 I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDAL 878 (994)
T ss_pred C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHH
Confidence 2 23322 22242 68999999999999999999999999999999999999999864
No 114
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-53 Score=382.39 Aligned_cols=415 Identities=25% Similarity=0.323 Sum_probs=334.4
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecC-CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSG-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
+..|+.++|.++++++|+++|+++.+ .+++||+|++++++++|+.|...|++.||+||++++|.++++.++|+++++|+
T Consensus 75 ~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv 154 (649)
T KOG1179|consen 75 ERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGV 154 (649)
T ss_pred cCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCc
Confidence 35789999999999999999999865 37999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccc----cchhhhhhhccccccccc---c
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLD----ADSELTLSLAHSESDTNA---I 153 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~ 153 (431)
+...+|+++..+.|.|.+..++++++|++.+..+.+.+..+.+..........+ .+....+..........+ .
T Consensus 155 ~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~vp~~ 234 (649)
T KOG1179|consen 155 ITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHPVPVS 234 (649)
T ss_pred eeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCCCCcc
Confidence 999999999999999999999999999999988777776443322211111111 111112221111111111 3
Q ss_pred ccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEe
Q 014065 154 SKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTL 233 (431)
Q Consensus 154 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 233 (431)
........++++++|||||||.||+.+++|......+..+...++++++|+++..+|++|..+.+.++..++..|+|+++
T Consensus 235 ~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~Vl 314 (649)
T KOG1179|consen 235 TRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVVL 314 (649)
T ss_pred cCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEEE
Confidence 34455678899999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred CCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCc-eecccC
Q 014065 234 PAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAP-VLEAYA 312 (431)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~-i~~~yg 312 (431)
.. .|+...+|+...+|+||++.....+.+.|++.+....+. -..+| +.-|..+.++.++.|.++||.. |...||
T Consensus 315 rk--KFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er-~HkVR--la~GNGLR~diW~~Fv~RFg~~~IgE~Yg 389 (649)
T KOG1179|consen 315 RK--KFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEER-QHKVR--LAYGNGLRPDIWQQFVKRFGIIKIGEFYG 389 (649)
T ss_pred ec--ccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhc-CceEE--EEecCCCCchHHHHHHHHcCCCeEEEEec
Confidence 88 999999999999999999999999999999887654322 23444 5678899999999999999855 999999
Q ss_pred cccccCcccCCCCCCCCCCCCCCccc------cc-cceEEEEC-CCCC----------cCCCCceeeEEEe--CCc---c
Q 014065 313 MTEATHLMSSNPLPEDGPHKPGSVGR------PV-GQEIAILD-EIGV----------PQEGGAKGEVCIR--GPN---V 369 (431)
Q Consensus 313 ~tE~~~~~~~~~~~~~~~~~~~~~G~------~~-~~~~~i~d-~~~~----------~~~~~~~Gel~v~--~~~---~ 369 (431)
+||...-.... ....+.+|+ -+ +.++.-+| .+|+ +|+.||.|.++-+ ... -
T Consensus 390 aTEgn~~~~N~------d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~ 463 (649)
T KOG1179|consen 390 ATEGNSNLVNY------DGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRS 463 (649)
T ss_pred cccCcceeeee------cCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhh
Confidence 99987544433 123344444 12 45555455 3343 5788899976433 223 3
Q ss_pred ccccccCcchhhhc-----ccCC--ceecCceEEEcCCCeEEEecccccceecCCeeccccceec
Q 014065 370 TKGYKNNPEANKSA-----FLFG--WFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFL 427 (431)
Q Consensus 370 ~~gy~~~~~~~~~~-----~~~g--~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~ 427 (431)
+.||.++.+.+++. |..| ||+|||+-.+|+.|++||.+|..|.+...|+|++-.|||.
T Consensus 464 F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~ 528 (649)
T KOG1179|consen 464 FLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVED 528 (649)
T ss_pred hccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHH
Confidence 78999866655444 3323 9999999999999999999999999999999999999985
No 115
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=7.5e-54 Score=408.24 Aligned_cols=346 Identities=20% Similarity=0.273 Sum_probs=284.4
Q ss_pred cccHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 30 DLTYSRIHELVERAASRLVAAGI-NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
-+.|+||.++++++|++|.+.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 46799999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred cCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHH
Q 014065 109 PAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAA 188 (431)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~ 188 (431)
+.+..... . .. . . .......+++.++++|||||||.||+|.+||.++..
T Consensus 99 ~~~~~~~~---------------~-~~--------~---~----~~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~ 147 (452)
T PRK07445 99 LDQLKLSH---------------P-PP--------L---P----SQGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTA 147 (452)
T ss_pred cCcccccc---------------C-CC--------C---C----ccccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHH
Confidence 76532110 0 00 0 0 001123468899999999999999999999999988
Q ss_pred HHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHh
Q 014065 189 SVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLD 268 (431)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 268 (431)
.+......+++.+ ++.++.+|++|.+|+.. ++.++..|+++++.+. ...........+++++++.++|++++.+++
T Consensus 148 ~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~-~~~~l~~G~t~v~~~~--~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~ 223 (452)
T PRK07445 148 SVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQ-FMRSFLTGGKLVILPY--KRLKSGQELPPNPSDFFLSLVPTQLQRLLQ 223 (452)
T ss_pred HHHHHHHHhcCCC-CceEeccCchhhhhHHH-HHHHHHcCCeEEEcCh--HhccchhhhhhhcCceEEEehHHHHHHHHh
Confidence 8887777777755 46788999999999865 7889999999998762 222222334457889999999999999886
Q ss_pred cccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEE
Q 014065 269 RHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAIL 347 (431)
Q Consensus 269 ~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~ 347 (431)
.. ...++++|.+++||++++++..+.+.+ +++++++.||+||++..+..... .+......++|+|+ +.+++|+
T Consensus 224 ~~----~~~l~~l~~i~~gG~~l~~~~~~~~~~-~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~~~~~G~~~p~~~v~i~ 297 (452)
T PRK07445 224 LR----PQWLAQFRTILLGGAPAWPSLLEQARQ-LQLRLAPTYGMTETASQIATLKP-DDFLAGNNSSGQVLPHAQITIP 297 (452)
T ss_pred hC----hhhhhcceEEEECCccCCHHHHHHHHh-cCCeEecCcchhhhcccccccCc-hhhccCCCcCCccCCCCeEEEc
Confidence 32 223689999999999999999998875 58999999999999865544321 22233456899999 7899987
Q ss_pred CCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceec
Q 014065 348 DEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFL 427 (431)
Q Consensus 348 d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~ 427 (431)
.++.|||+++|+.++.||+++... .+|||+|||+|++|+||++++.||.||+||++|++|+|.|||.
T Consensus 298 --------~g~~Gel~v~g~~~~~gY~~~~~~-----~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~ 364 (452)
T PRK07445 298 --------ANQTGNITIQAQSLALGYYPQILD-----SQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEA 364 (452)
T ss_pred --------CCCcceEEEeCCccchhhcCCccC-----CCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHH
Confidence 356799999999999999975321 3689999999999999999999999999999999999999998
Q ss_pred cc
Q 014065 428 AK 429 (431)
Q Consensus 428 a~ 429 (431)
+.
T Consensus 365 ~l 366 (452)
T PRK07445 365 AI 366 (452)
T ss_pred HH
Confidence 63
No 116
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.9e-53 Score=410.69 Aligned_cols=362 Identities=22% Similarity=0.235 Sum_probs=276.1
Q ss_pred CCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc------hhHHHHHHHhcCccccccccccc
Q 014065 62 FPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG------NAAAQAAASKLNISHATATLLDA 135 (431)
Q Consensus 62 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 135 (431)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. .+...+.................
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998642 12222221111111000000000
Q ss_pred -------chhhhhhhcc---ccc---cccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCC
Q 014065 136 -------DSELTLSLAH---SES---DTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTES 202 (431)
Q Consensus 136 -------~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~ 202 (431)
.....+.... ... ...........++++++++|||||||.||+|.++|.+++.++......+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 0000111000 000 000111112346899999999999999999999999988776665666788899
Q ss_pred CeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhccc-CCCCCCCCCc
Q 014065 203 DSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHV-AKPEPVYPKL 281 (431)
Q Consensus 203 ~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-~~~~~~~~~l 281 (431)
|++++.+|++|..++. .++.++..|+++++.+. .+++..+++.|+++++|++.++|+++..+++... .....+++++
T Consensus 161 d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~~~~-~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~L 238 (499)
T PLN03051 161 DVVCWPTNLGWMMGPW-LLYSAFLNGATLALYGG-APLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKL 238 (499)
T ss_pred CEEEEccCcceeeehH-HHHHHHHcCCEEEecCC-CCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhh
Confidence 9999999999999976 48889999999998763 4678899999999999999999999999887542 1123457899
Q ss_pred cEEEeccCCCcHHHHHHHHHHh--CCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCC-
Q 014065 282 RFIRSCSASLAPVILSRLEEAF--GAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGG- 357 (431)
Q Consensus 282 ~~i~~~g~~~~~~~~~~~~~~~--~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~- 357 (431)
|.+++||++++++..+++.+.+ ++.+++.||+||++..+..... ......+++|+|. +++++|+|++|++++.|
T Consensus 239 r~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~--~~~~~~~~~G~p~~~~~~~ivd~~g~~~~~g~ 316 (499)
T PLN03051 239 RVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTL--LQPQAPGAFSTASLGTRFVLLNDNGVPYPDDQ 316 (499)
T ss_pred eEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccc--cCCCCCccccCCCCCceEEEECCCCCCCCCCC
Confidence 9999999999999998877643 4789999999998754332211 1233467899998 89999999999999988
Q ss_pred -ceeeEEEeCCcc--ccccccCcchhhhcccCC----------ceecCceEEEcCCCeEEEecccccceecCCeeccccc
Q 014065 358 -AKGEVCIRGPNV--TKGYKNNPEANKSAFLFG----------WFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESIS 424 (431)
Q Consensus 358 -~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~g----------~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~ 424 (431)
+.|||+++||.+ +.||++++. + ..+.+| ||+|||+|++|+||+++|+||.||+||++|++|+|.|
T Consensus 317 ~~~Gel~v~g~~~~~~~gy~~~~~-~-~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~E 394 (499)
T PLN03051 317 PCVGEVALAPPMLGASDRLLNADH-D-KVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVE 394 (499)
T ss_pred CcceEEEEecCcCCCCccccCCcc-c-ceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHH
Confidence 579999999976 579997643 3 234344 6899999999999999999999999999999999999
Q ss_pred eeccc
Q 014065 425 LFLAK 429 (431)
Q Consensus 425 iE~a~ 429 (431)
||.+.
T Consensus 395 IE~~l 399 (499)
T PLN03051 395 IERAC 399 (499)
T ss_pred HHHHH
Confidence 99864
No 117
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=3.1e-52 Score=398.38 Aligned_cols=361 Identities=29% Similarity=0.414 Sum_probs=300.9
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 32 TYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 32 Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++..+++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred chhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHH
Q 014065 112 GNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVS 191 (431)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~ 191 (431)
...... ....+ .. +... .............+++++++|||||||.||+|.++|.++...+.
T Consensus 81 ~~~~~~----------~~~~~----~~--~~~~---~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~ 141 (436)
T TIGR01923 81 LEEKDF----------QADSL----DR--IEAA---GRYETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAV 141 (436)
T ss_pred ccccce----------eecch----Hh--hhhc---ccccccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHH
Confidence 321100 00000 00 0000 00011112334567899999999999999999999999999888
Q ss_pred HHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhccc
Q 014065 192 NIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHV 271 (431)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 271 (431)
.....++++++++++..+|++|..++.. ++.++..|+++++.+ .+ ..+++.++++++|++.++|+++..+++...
T Consensus 142 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~~~--~~--~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~ 216 (436)
T TIGR01923 142 GSKENLGFTEDDNWLLSLPLYHISGLSI-LFRWLIEGATLRIVD--KF--NQLLEMIANERVTHISLVPTQLNRLLDEGG 216 (436)
T ss_pred HHHhhcCCCCCceEEEccCcHhHHHHHH-HHHHHhcCceEEecc--hH--HHHHHHHHHhCCeEEEeHHHHHHHHHhCcC
Confidence 8888889999999999999999998865 889999999999987 22 489999999999999999999999987643
Q ss_pred CCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCC
Q 014065 272 AKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEI 350 (431)
Q Consensus 272 ~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~ 350 (431)
. .+++|.++++|+++++++.+.+.. +++.+++.||+||++..+....... .....++|+|+ ++++++.+++
T Consensus 217 ~-----~~~l~~~~~~G~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~--~~~~~~~G~~~~~~~~~i~~~~ 288 (436)
T TIGR01923 217 H-----NENLRKILLGGSAIPAPLIEEAQQ-YGLPIYLSYGMTETCSQVTTATPEM--LHARPDVGRPLAGREIKIKVDN 288 (436)
T ss_pred C-----CCceEEEEECCCCCCHHHHHHHHH-hCCceeeEecCCccchhccCcCccc--cccccCCCccCCCcEEEEEeCC
Confidence 2 268999999999999999998875 5999999999999987665543211 12222489998 7888884432
Q ss_pred CCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 351 GVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 351 ~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
. ++.|||+++++.++.||+++++.+...+.+|||+|||++++++||.+++.||.+|+||++|++++|.+||.+.
T Consensus 289 ~-----~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l 362 (436)
T TIGR01923 289 K-----EGHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEIETVL 362 (436)
T ss_pred C-----CCceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHH
Confidence 2 2679999999999999999877776666789999999999999999999999999999999999999999863
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-50 Score=379.47 Aligned_cols=330 Identities=16% Similarity=0.204 Sum_probs=285.7
Q ss_pred EEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCC
Q 014065 23 LSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSE 102 (431)
Q Consensus 23 ~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 102 (431)
+++.+ +++||.||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+++..+++.++
T Consensus 2 ~~~~~-~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~ 79 (414)
T PRK08308 2 LIVND-EEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAG 79 (414)
T ss_pred eEecC-ceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCC
Confidence 45444 79999999999999999985 68999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeec
Q 014065 103 SKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLT 182 (431)
Q Consensus 103 ~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s 182 (431)
++.+++++.... .. . .....++++++++|||||||.||+|.++
T Consensus 80 ~~~~i~~~~~~~-----------------~~--------------~------~~~~~~~~~~~i~~TSGtTG~PKgv~~s 122 (414)
T PRK08308 80 CHGLLYGESDFT-----------------KL--------------E------AVNYLAEEPSLLQYSSGTTGEPKLIRRS 122 (414)
T ss_pred CCEEEecCcccc-----------------cc--------------c------CCCCCCCCceEEEECCCCCCCCcEEEEe
Confidence 999998763110 00 0 0113467889999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHH
Q 014065 183 QNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTI 262 (431)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~ 262 (431)
|.++..++..+...+++..+++.+..+|++|.+++...++.++..|+++++.+ .+++..+++.+++++++.++++|+.
T Consensus 123 ~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~l~~~~~t~~~~~P~~ 200 (414)
T PRK08308 123 WTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT--NKNPKFALNILRNTPQHILYAVPLM 200 (414)
T ss_pred hHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC--CCCHHHHHHHHHHhCCeEEEcCHHH
Confidence 99999888888888888899999999999999999888999999999999887 6789999999999999999999999
Q ss_pred HHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCCccccc-c
Q 014065 263 HQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-G 341 (431)
Q Consensus 263 ~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~ 341 (431)
+..+.+.... ..+++.++++|++++++..+.+++. +.++++.||+||++.+.... ....++++|+|+ +
T Consensus 201 ~~~l~~~~~~-----~~~l~~~~~~G~~l~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~-----~~~~~~~~G~p~~~ 269 (414)
T PRK08308 201 LHILGRLLPG-----TFQFHAVMTSGTPLPEAWFYKLRER-TTYMMQQYGCSEAGCVSICP-----DMKSHLDLGNPLPH 269 (414)
T ss_pred HHHHHhcCCc-----cccccEEEEccCCCCHHHHHHHHHh-CChhhhccCccccCCeeecC-----CCCCCCccCccCCC
Confidence 9999876432 1368889999999999999999876 67899999999998644322 123457899999 7
Q ss_pred ceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeecc
Q 014065 342 QEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHE 421 (431)
Q Consensus 342 ~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~ 421 (431)
+++++.++ .++.|||++++. ++||+|||+|++|+||++++.||.+|+||++|++|+
T Consensus 270 ~~~~~~~~------~~~~gel~v~~~------------------~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~ 325 (414)
T PRK08308 270 VSVSAGSD------ENAPEEIVVKMG------------------DKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVY 325 (414)
T ss_pred eEEEEecC------CCCCceEEEEcC------------------CceEECCceEEECCCccEEEecccCCeEEECCEEEC
Confidence 88888763 245699999752 469999999999999999999999999999999999
Q ss_pred ccceecc
Q 014065 422 SISLFLA 428 (431)
Q Consensus 422 ~~~iE~a 428 (431)
|.|||.+
T Consensus 326 p~eIE~~ 332 (414)
T PRK08308 326 PIEVEDV 332 (414)
T ss_pred HHHHHHH
Confidence 9999986
No 119
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.7e-43 Score=349.29 Aligned_cols=406 Identities=26% Similarity=0.335 Sum_probs=336.3
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
.++.+.|.+.+...|++.|+... +..+||+|+..+++++|+.|.+.|+.+++.|+++.+.+++++++++|++++|..++
T Consensus 227 ~~i~~~f~~~a~~~p~~~a~~~~-~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yv 305 (642)
T COG1020 227 LTIHLLFEEQAATTPDAVALVRG-GQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYV 305 (642)
T ss_pred chHHHHHHHHHHhCCCceeEecC-CCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEe
Confidence 46899999999999999998865 47999999999999999999999999999999999889999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCe
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDV 163 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (431)
|++|.++.+++.++++...++.+++......... .... +........ ..... .......+++.
T Consensus 306 P~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~--------~~~~~-~~~~~~~~~~~ 368 (642)
T COG1020 306 PLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDV------GLPG--LALDDALSE--------IPDTD-PIPQALLGDAL 368 (642)
T ss_pred cCCCCChHHHHHHHHhhcCccEEEeccccccccc------cCCc--ccccccccc--------CCccC-cccccCCCCCe
Confidence 9999999999999999999999998733211000 0000 000000000 00000 00233456899
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-CCChh
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG-RFSAS 242 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~~ 242 (431)
+|++|||||||.||||..+|.++.+.+......+....+++++...++.+..+... ++.++..|+++++.+.. ..++.
T Consensus 369 ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~-~f~~l~~G~~l~~~~~~~~~~~~ 447 (642)
T COG1020 369 AYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFE-IFGALLEGARLVLAPALLQVDPA 447 (642)
T ss_pred EEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHH-HHHHHhCCCEEEecCccccCCHH
Confidence 99999999999999999999999987777777799999999999999877777666 89999999999987743 34888
Q ss_pred hHHHHHHHhcceeeecchHHHHHHHhcccCC-CCCCCCCccEEEeccCCCcHHHHHHHHHHh--CCceecccCcccccCc
Q 014065 243 TFWQDMIKYNATWYTAVPTIHQIVLDRHVAK-PEPVYPKLRFIRSCSASLAPVILSRLEEAF--GAPVLEAYAMTEATHL 319 (431)
Q Consensus 243 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~--~~~i~~~yg~tE~~~~ 319 (431)
.+.+.+.+++++++..+|..+..++...... .....+.+|.+++||+.++..+...+.... ...+.+.||+||+...
T Consensus 448 ~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~ 527 (642)
T COG1020 448 ALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLD 527 (642)
T ss_pred HHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhh
Confidence 9999999999999999999999998762221 112234599999999999999999888765 4689999999997766
Q ss_pred ccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCC-ceecCceEEE
Q 014065 320 MSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFG-WFHTGDIGYF 397 (431)
Q Consensus 320 ~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g-~~~TGD~~~~ 397 (431)
............ ...+|+|+ +..+.|+|+.+++++.|..||+++.|.++.+||+++++.+.+.|... +|+|||++++
T Consensus 528 ~~~~~~~~~~~~-~~piG~p~~n~~~~ild~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~ 606 (642)
T COG1020 528 APSFPISAELES-RVPIGRPVANTQLYILDQGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARP 606 (642)
T ss_pred eeeEEcccccCC-CCCcceeeCCCeEEEECCCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeE
Confidence 554443222222 56899999 78999999889999999999999999999999999999999999775 9999999999
Q ss_pred cCCCeEEEecccccceecCCeeccccceeccc
Q 014065 398 DSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 398 ~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
++||.+.++||.|+++|++|.+|.+.|||.+.
T Consensus 607 ~~dg~~e~lgr~D~qvki~g~Riel~eie~~l 638 (642)
T COG1020 607 LADGALEYLGRKDSQVKIRGFRIELGEIEAAL 638 (642)
T ss_pred CCCCeEEEeccccceeEeceEecCcHHHHHHH
Confidence 99999999999999999999999999999864
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.3e-42 Score=358.07 Aligned_cols=384 Identities=17% Similarity=0.169 Sum_probs=283.0
Q ss_pred cccHHHHHHHHHHhcCCcceEEec---C-CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHh
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVS---G-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRA 78 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~---~-~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 78 (431)
..|+.++|.+.++++|+++|+... + .+.+||+|+.++++++|++|++.|+++||+|+|+++|+++|+++.+||+++
T Consensus 426 ~~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~ 505 (1452)
T PTZ00297 426 VRSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALY 505 (1452)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 358999999999999999999742 2 257999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccccc---ch----------hhhhhhcc
Q 014065 79 RATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA---DS----------ELTLSLAH 145 (431)
Q Consensus 79 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----------~~~~~~~~ 145 (431)
|++.+|+++. .+++.++++.++++++|++.+..+.+.+.... .+.. ++.+.+. .. ...+....
T Consensus 506 GaV~VPly~t--~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~-~Lr~-IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll 581 (1452)
T PTZ00297 506 GFTTLPLVGK--GSTMRTLIDEHKIKVVFADRNSVAAILTCRSR-KLET-VVYTHSFYDEDDHAVARDLNITLIPYEFVE 581 (1452)
T ss_pred CCEEEeCCCC--HHHHHHHHHhcCCcEEEEchhHHHHHHhhccc-CCcE-EEEECCCcccccccccccCCcceeeHHHHH
Confidence 9999999754 67899999999999999997766655443321 2211 1112110 00 00111111
Q ss_pred ccccc-cccccCCCCCCCeEEEEe---ccCCCCCCCeeeechHHHHHHHHHHHHHh---cCCCCCeEEEecChhhHHHHH
Q 014065 146 SESDT-NAISKLTNDPSDVALFLH---TSGTTSRPKGVPLTQNNLAASVSNIKSVY---KLTESDSTVIVLPLFHVHGML 218 (431)
Q Consensus 146 ~~~~~-~~~~~~~~~~~~~~~i~~---TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~ 218 (431)
..... .........+++++.++| ||||||.||||++||.+++.++....... ...++|+++.++|++|.++..
T Consensus 582 ~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~ 661 (1452)
T PTZ00297 582 QKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRV 661 (1452)
T ss_pred hcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHH
Confidence 11100 111122346788988885 99999999999999999999888765432 356789999999999999965
Q ss_pred HHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCC------------------------
Q 014065 219 AGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP------------------------ 274 (431)
Q Consensus 219 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~------------------------ 274 (431)
. .+.++..|+++.. +++..+++.+++++||+++++|++|+.+.+......
T Consensus 662 ~-~~~~l~~G~~I~~-----~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~ 735 (1452)
T PTZ00297 662 F-VLGLFAHGSAVAT-----VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINI 735 (1452)
T ss_pred H-HHHHHHcCCEEEe-----CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 5 7788999999864 368899999999999999999999998865431110
Q ss_pred -CC----------------CCCCccEEEeccC--CCcHHHHHHHHHHhCCceecccCcccccCcccCCCCCCCCCCCCCC
Q 014065 275 -EP----------------VYPKLRFIRSCSA--SLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGS 335 (431)
Q Consensus 275 -~~----------------~~~~l~~i~~~g~--~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~ 335 (431)
.. .-..+|.+++||. +++..+.. +++++..||+||+. +.+... .. ..
T Consensus 736 g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~------~i~i~~g~glTE~~---~~~~~~---~~--~~ 801 (1452)
T PTZ00297 736 HRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE------HISVCYVPCLREVF---FLPSEG---VF--CV 801 (1452)
T ss_pred CCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC------CceEEEecceEEee---eecCCC---Cc--cc
Confidence 00 0156888888873 44433222 56788899999953 222221 11 13
Q ss_pred ccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCeEEEeccccccee
Q 014065 336 VGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELIN 414 (431)
Q Consensus 336 ~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~ 414 (431)
.|.|+ ++++++.+.+.... .+..|||++++ .++++.|++. .+||+ +||+|+|.||++|+||
T Consensus 802 ~G~PlpgvEvKI~~~~E~~~-~~~~GEIlvr~-------~kdpe~T~e~-~~gW~---------~dG~L~IidRkKdlik 863 (1452)
T PTZ00297 802 DGTPAPSLQVDLEPFDEPSD-GAGIGQLVLAK-------KGEPRRTLPI-AAQWK---------RDRTLRLLGPPLGILL 863 (1452)
T ss_pred CCeecCceEEEEcccccccC-CCCCCeEEEEE-------CCChHHHHHh-hCcCc---------cCCeEEEEeccccceE
Confidence 49999 89999987321111 13469999964 4778887763 35664 7999999999999999
Q ss_pred -cCCeeccccceecc
Q 014065 415 -RGGNLHESISLFLA 428 (431)
Q Consensus 415 -~~G~~i~~~~iE~a 428 (431)
.+|++|+|+.||.+
T Consensus 864 ls~GEyVaP~~IE~~ 878 (1452)
T PTZ00297 864 PVAYEYVIAAELERI 878 (1452)
T ss_pred CCCCcEEcHHHHHHH
Confidence 79999999999975
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.2e-36 Score=278.36 Aligned_cols=243 Identities=26% Similarity=0.392 Sum_probs=200.3
Q ss_pred cCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC
Q 014065 155 KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234 (431)
Q Consensus 155 ~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 234 (431)
.....++++++++|||||||.||+|.++|.++..........+ ...++++..+|++|.+++.. ++.++..|+++++.
T Consensus 29 ~~~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~-~~~~l~~g~~~v~~ 105 (358)
T PRK07824 29 VGEPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQV-LVRSVIAGSEPVEL 105 (358)
T ss_pred cCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHH-HHHHHHcCCeEEec
Confidence 3345578999999999999999999999999988777655543 35578899999999999876 77888889888773
Q ss_pred C-CCCCChhhHHHHHHHhc--ceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceeccc
Q 014065 235 A-AGRFSASTFWQDMIKYN--ATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAY 311 (431)
Q Consensus 235 ~-~~~~~~~~~~~~i~~~~--~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~y 311 (431)
. ...+++..+++.+++++ .++...+|..+..++..... ..+++++|.+++||++++++..+++.+ +++++++.|
T Consensus 106 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~--~~~~~~l~~i~~gG~~l~~~~~~~~~~-~~~~v~~~Y 182 (358)
T PRK07824 106 DVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA--TAALAELDAVLVGGGPAPAPVLDAAAA-AGINVVRTY 182 (358)
T ss_pred CcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc--cCCcccceEEEECCCCCCHHHHHHHHh-cCCcEEecc
Confidence 2 22578999999999998 56677788888777664432 234789999999999999999999875 599999999
Q ss_pred CcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCcee
Q 014065 312 AMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFH 390 (431)
Q Consensus 312 g~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~ 390 (431)
|+||++..+. ..|+|+ ++++++.| |||+++|+.++.||+++++... ...+|||+
T Consensus 183 G~TE~~~~~~-------------~~G~~~~g~~v~i~~-----------Gei~v~g~~~~~gY~~~~~~~~-~~~~g~~~ 237 (358)
T PRK07824 183 GMSETSGGCV-------------YDGVPLDGVRVRVED-----------GRIALGGPTLAKGYRNPVDPDP-FAEPGWFR 237 (358)
T ss_pred cCCccCCCcC-------------cCceeCCCCEEEecC-----------CEEEEecCccccccCCCccccc-ccCCCcee
Confidence 9999875432 247788 78888854 9999999999999998876432 12468999
Q ss_pred cCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 391 TGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 391 TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|||+|++ ++|.+++.||.||+||.+|++|+|.|||.+.
T Consensus 238 TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l 275 (358)
T PRK07824 238 TDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAAL 275 (358)
T ss_pred cccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHH
Confidence 9999999 8999999999999999999999999999863
No 122
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=1.2e-33 Score=267.72 Aligned_cols=250 Identities=16% Similarity=0.116 Sum_probs=194.5
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHH---HHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSN---IKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
..++++.+++||||||.||++.++|.++..+... .....++.++|++++..++.+..+.+...+.+...|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 4567888999999999999999999998765333 3344688899998887665444443333566778898888765
Q ss_pred CCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCC-CCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcc
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP-EPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMT 314 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~-~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~t 314 (431)
..++..+++.|++++++++.++|+.+..+++...... .....++|.++++|+++++++.+.+++.||+++++.||+|
T Consensus 153 --~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~t 230 (422)
T TIGR02155 153 --GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLS 230 (422)
T ss_pred --CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccch
Confidence 3467899999999999999999999999987654322 1223589999999999999999999999999999999999
Q ss_pred cccC-cccCCCCCCCCCCCCCCccccc---cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCce
Q 014065 315 EATH-LMSSNPLPEDGPHKPGSVGRPV---GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWF 389 (431)
Q Consensus 315 E~~~-~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~ 389 (431)
|+++ .+...+. . . ..|.++ ...++|+| ++|++++.|+.|||++++. +...+..+||
T Consensus 231 E~~~~~~~~~~~-~---~---~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~------------~~~~~p~~ry 291 (422)
T TIGR02155 231 EVIGPGVAMECV-E---T---QDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTL------------TKEALPVIRY 291 (422)
T ss_pred hhcCCceeeccc-c---c---CCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecC------------CccccceeeE
Confidence 9853 2222111 0 0 123333 36778999 5799999999999999873 2344556899
Q ss_pred ecCceEEEcCC-C-----eEEEecccccceecCCeeccccceeccc
Q 014065 390 HTGDIGYFDSD-G-----YLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 390 ~TGD~~~~~~~-g-----~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.+.
T Consensus 292 ~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l 337 (422)
T TIGR02155 292 RTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVI 337 (422)
T ss_pred EcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHH
Confidence 99999999876 4 5789999999999999999999999763
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.98 E-value=3.5e-31 Score=244.59 Aligned_cols=219 Identities=21% Similarity=0.171 Sum_probs=173.0
Q ss_pred CCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCC--CCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCC
Q 014065 161 SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTE--SDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGR 238 (431)
Q Consensus 161 ~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~ 238 (431)
+..++++|||||||.||+|.++|.++...+..+...+++.. .+++++.+|++|.+++...++.++..|+++++.+ .
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~--~ 172 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA--A 172 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC--C
Confidence 55789999999999999999999999988887777777644 4679999999999998777888999999999877 6
Q ss_pred CChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCC-ceecccCccccc
Q 014065 239 FSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGA-PVLEAYAMTEAT 317 (431)
Q Consensus 239 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~-~i~~~yg~tE~~ 317 (431)
+++..+++.++.+ +++.++|++++.+.+.. .++++++. ++||+++++++++.+++. +. .+++.||+||++
T Consensus 173 ~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~-----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~ 243 (386)
T TIGR02372 173 APASGIMRHARPG--DLIVGTPFIWEQLADLD-----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETG 243 (386)
T ss_pred CChHHHHHhhccC--CEEEECcHHHHHHHhhC-----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccc
Confidence 7888888877653 78999999999997653 23567775 678999999999999875 64 699999999998
Q ss_pred CcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEE
Q 014065 318 HLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGY 396 (431)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~ 396 (431)
++..... ++..|+++ +.++.+ + ++. + .|+ ..|++|||+++
T Consensus 244 ~i~~~~~--------~~~~~~~~p~~~~~~-~-~~~--------~---~g~------------------~~~~~tgD~g~ 284 (386)
T TIGR02372 244 GIGLREA--------PDDPFRLLPDLACFA-D-TLS--------S---AGL------------------ARRLDLQDRLA 284 (386)
T ss_pred ccccccC--------CCCCcccCCCccccC-C-Ccc--------C---CCc------------------cceeecCceEE
Confidence 7654321 12244555 333322 1 110 0 011 12688999999
Q ss_pred EcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 397 FDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 397 ~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|++|++++.||.||+||++|++|+|.+||.+.
T Consensus 285 ~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l 317 (386)
T TIGR02372 285 WDKDGGFTILGRKDEILQVGGVNVSPGHVRDIL 317 (386)
T ss_pred EcCCCcEEEecccCCEEEECCEEEcHHHHHHHH
Confidence 999999999999999999999999999999863
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.97 E-value=3.9e-29 Score=239.20 Aligned_cols=423 Identities=18% Similarity=0.205 Sum_probs=296.3
Q ss_pred ccHHHHHHHHHHhcCCcceEEecC-----CCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCcHHHHHHHHHHHH
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSG-----KFDLTYSRIHELVERAASRLVAA-GINAGDVVALTFPNTVEFVIMFLAVIR 77 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~-----~~~~Ty~el~~~~~~~a~~L~~~-gl~~gd~V~i~~~n~~~~~~~~lA~~~ 77 (431)
.++.|+|+++++.+|+++|+..-+ +.++||++|..++.+++..|..+ -+++||.|++++++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 478999999999999999998643 37999999999999999999986 589999999999999999999999999
Q ss_pred hCcEEEecCCCCCH------HHHHHHHhcCCceEEEecCCchhHHHH--HHHhcCcccc--cccccccchhhhhhhcccc
Q 014065 78 ARATAAPLNAAYTP------DEFEFYLSDSESKLLLTPAEGNAAAQA--AASKLNISHA--TATLLDADSELTLSLAHSE 147 (431)
Q Consensus 78 ~G~~~v~l~~~~~~------~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 147 (431)
+|++++|++|.... ..+..+++.+++..|+++......+.. +......... .....+.............
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~~k~~~~~~ 929 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETIRKRKKNIK 929 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhhhhhhhhhh
Confidence 99999999887643 368899999999999999874433321 1111111100 0001111100000000001
Q ss_pred ccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhc
Q 014065 148 SDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAA 227 (431)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 227 (431)
......++-....+.+|++-+.--++|.--++.++|.++++.++.......+.++.-++...+.+...|+..+.+..++.
T Consensus 930 k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wcLlgVys 1009 (1363)
T KOG3628|consen 930 KLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWCLLGVYS 1009 (1363)
T ss_pred ccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHHHHHHHHc
Confidence 11111222234567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeCCCCCC--ChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCC------CCCCCccEEEeccCCCcHHHHHHH
Q 014065 228 GAAVTLPAAGRF--SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPE------PVYPKLRFIRSCSASLAPVILSRL 299 (431)
Q Consensus 228 G~~~~~~~~~~~--~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~------~~~~~l~~i~~~g~~~~~~~~~~~ 299 (431)
|.+.++.++..+ ++..++..++++++.-++.+-..+..+.+....... .+.++ ..+...-+.-...+..-+
T Consensus 1010 Gh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~-s~vv~~~~RPr~ali~sf 1088 (1363)
T KOG3628|consen 1010 GHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSS-SIVVPAEERPRIALIASF 1088 (1363)
T ss_pred CCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhccccc-ceeeecCCccHHHHHHHH
Confidence 999877664333 889999999999999999988888887765543211 11222 223333444445566666
Q ss_pred HHHh---CCc---eecccC-------------ccccc-CcccCCCCCCCC-----CCCC-----CCccccc-cceEEEEC
Q 014065 300 EEAF---GAP---VLEAYA-------------MTEAT-HLMSSNPLPEDG-----PHKP-----GSVGRPV-GQEIAILD 348 (431)
Q Consensus 300 ~~~~---~~~---i~~~yg-------------~tE~~-~~~~~~~~~~~~-----~~~~-----~~~G~~~-~~~~~i~d 348 (431)
.+.| |.. +--.|+ ..|-. ...-.+..+++. ...+ -..|... +.++.|++
T Consensus 1089 ~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~Ivn 1168 (1363)
T KOG3628|consen 1089 KKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVN 1168 (1363)
T ss_pred HHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeC
Confidence 6555 211 112222 22211 111111111100 0000 1125554 78999999
Q ss_pred CC-CCcCCCCceeeEEEeCCccccccccCcc-hhhhccc----------CCceecCceEEEc------CC----CeEEEe
Q 014065 349 EI-GVPQEGGAKGEVCIRGPNVTKGYKNNPE-ANKSAFL----------FGWFHTGDIGYFD------SD----GYLHLV 406 (431)
Q Consensus 349 ~~-~~~~~~~~~Gel~v~~~~~~~gy~~~~~-~~~~~~~----------~g~~~TGD~~~~~------~~----g~l~~~ 406 (431)
++ ..+|.+|+.||||+.+.+-+.+|+...+ .....|. .+|-||||+|++. +. ..+|++
T Consensus 1169 PEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVl 1248 (1363)
T KOG3628|consen 1169 PETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVL 1248 (1363)
T ss_pred CccccccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEe
Confidence 55 7899999999999999998888765321 1111121 1499999999973 22 359999
Q ss_pred cccccceecCCeeccccceec
Q 014065 407 GRIKELINRGGNLHESISLFL 427 (431)
Q Consensus 407 gR~~d~i~~~G~~i~~~~iE~ 427 (431)
|-.++.+..+|.+++|.+||.
T Consensus 1249 G~i~EtlEl~GL~h~p~DIE~ 1269 (1363)
T KOG3628|consen 1249 GAIDETLELNGLRHFPSDIET 1269 (1363)
T ss_pred ecccceeeecCcccCcchHHH
Confidence 999999999999999999995
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.96 E-value=2.9e-28 Score=230.91 Aligned_cols=250 Identities=20% Similarity=0.133 Sum_probs=186.5
Q ss_pred CCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC
Q 014065 158 NDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234 (431)
Q Consensus 158 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 234 (431)
...++++.+.+||||||.||++.++|..+.......... .++.++|+++...+..+..+......++...|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 345688899999999999999999999987666544433 48889999999988877666555456677888877543
Q ss_pred CCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCC-CCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCc
Q 014065 235 AAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP-EPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAM 313 (431)
Q Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~-~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~ 313 (431)
. .....++.|++++++.+.++|+.+..+++...... .....++|.+++||++++++..+.+.+.||+++++.||+
T Consensus 163 ~----~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~ 238 (445)
T TIGR03335 163 G----KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGS 238 (445)
T ss_pred C----chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCCh
Confidence 3 23456899999999999999999888876544322 112468999999999999999999999999999999999
Q ss_pred ccccCcccCCCCCCCCCCCCCCccccc---cceEEEECCC-CCcCCCCceeeEEEeCCccccccccCcchhhhcccCCce
Q 014065 314 TEATHLMSSNPLPEDGPHKPGSVGRPV---GQEIAILDEI-GVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWF 389 (431)
Q Consensus 314 tE~~~~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d~~-~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~ 389 (431)
||++.. ..+.. ..|..+ ...++|+|++ +.+++.|+.|||++++-.... ....+.---|
T Consensus 239 TE~~~~-~~c~~---------~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~--------~r~~~PliRY 300 (445)
T TIGR03335 239 TEGTMC-GECQA---------VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPG--------ERCGSLLINY 300 (445)
T ss_pred hhhhhe-EEecC---------CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCC--------ccCCceEEEe
Confidence 998632 22110 123443 2678999976 567899999999998842110 0000111139
Q ss_pred ecCceEEEcC-C----C----eEEEecccccceecCCeeccccceeccc
Q 014065 390 HTGDIGYFDS-D----G----YLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 390 ~TGD~~~~~~-~----g----~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|||++++.. + | .+...||.||+++++|.+++|.+||.|.
T Consensus 301 rtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l 349 (445)
T TIGR03335 301 DTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAV 349 (445)
T ss_pred ecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHH
Confidence 9999999732 2 2 2445799999999999999999999875
No 126
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.96 E-value=9.8e-28 Score=205.38 Aligned_cols=209 Identities=19% Similarity=0.196 Sum_probs=158.5
Q ss_pred HHHHHHhcCCcceEEec-C----CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 10 LNQVIDQFSSKRALSVS-G----KFDLTYSRIHELVERAASRLVA-AGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 10 l~~~a~~~p~~~a~~~~-~----~~~~Ty~el~~~~~~~a~~L~~-~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
|...++.+|+++|+++. + ++++||+|+.++++++|+.|++ .|+++||+|+++++|+++++++++||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 56788899999999853 2 2369999999999999999998 6999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccc-----cc------cchhhhhhhccccccccc
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATL-----LD------ADSELTLSLAHSESDTNA 152 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~~~~~~~~~ 152 (431)
|++ .+++++++++++....... . .....+ .. ......+...........
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAG-S------GEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGDQF 141 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhccc-C------CceEEEeccccccCCCCCCCCcccchhhhhhccCCCC
Confidence 995 6789999998876555321 0 011100 00 000011111010000111
Q ss_pred cccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEE
Q 014065 153 ISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVT 232 (431)
Q Consensus 153 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~ 232 (431)
.+.....++|++.++||||+ +|.+++.+. ...++.++|+++ .+|++|.+|+...++.++..|++++
T Consensus 142 ~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v 207 (227)
T TIGR03089 142 APYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLV 207 (227)
T ss_pred CCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEE
Confidence 11113456899999999985 566655443 566789999999 9999999999888999999999999
Q ss_pred eCCCCCCChhhHHHHHHHhcce
Q 014065 233 LPAAGRFSASTFWQDMIKYNAT 254 (431)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~~~t 254 (431)
+.+ +|++..+++.|+++|||
T Consensus 208 ~~~--rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 208 LVT--HPDPARLDQIAETERVT 227 (227)
T ss_pred Eec--CCCHHHHHHHHHhhcCC
Confidence 987 89999999999999986
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.93 E-value=1.8e-24 Score=194.70 Aligned_cols=253 Identities=17% Similarity=0.151 Sum_probs=191.3
Q ss_pred ccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChh-hHHHHHHHHHHHHhcCC
Q 014065 154 SKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLF-HVHGMLAGLLSSFAAGA 229 (431)
Q Consensus 154 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~G~ 229 (431)
.......++...+-.||||||.|+.+.++...+..+...+.. ..+...+|++....... +..|+.. ..++-..|+
T Consensus 83 ~~~~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~-~~ga~rig~ 161 (438)
T COG1541 83 GDFAVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGL-HYGAERIGA 161 (438)
T ss_pred ccccccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchh-HHHHHhhCE
Confidence 344556677788999999999999999999987666555444 44778888887765532 1222222 444555555
Q ss_pred EEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCC-CCCCCCccEEEeccCCCcHHHHHHHHHHhCCcee
Q 014065 230 AVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP-EPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVL 308 (431)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~-~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~ 308 (431)
+++=.. .-+.+..++.++.++++++.++|+.+..+++...+.. ...-.++|.+++|+|+++++..+.+.+.||+..+
T Consensus 162 ~vip~~--~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~ 239 (438)
T COG1541 162 TVIPIS--GGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAF 239 (438)
T ss_pred EEEccC--CccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCcee
Confidence 554332 3478899999999999999999999999999887763 2335789999999999999999999999999999
Q ss_pred cccCcccccCcccCCCCCCCCCCCCCCccccc---cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhcc
Q 014065 309 EAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV---GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF 384 (431)
Q Consensus 309 ~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 384 (431)
+.||+||..+.....+... -|-.+ ...++++| +.|+.+++|+.|||+++.- ++..+
T Consensus 240 diYGltE~~g~g~~eC~~~--------~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L------------~~~~~ 299 (438)
T COG1541 240 DIYGLTEGFGPGAGECTER--------NGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTL------------TKEGM 299 (438)
T ss_pred eccccccccCCcccccccc--------cCCCcchhhceeeeecCCcCccCCCCCeeEEEEEec------------cccCc
Confidence 9999999976642211111 13333 36789999 5599999999999999872 12222
Q ss_pred cCCceecCceEEEcCCC---------eEEEecccccceecCCeeccccceeccc
Q 014065 385 LFGWFHTGDIGYFDSDG---------YLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 385 ~~g~~~TGD~~~~~~~g---------~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+---|+|||++.+.++- .-.+.||.||++++.|.+|+|.+||.+.
T Consensus 300 PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l 353 (438)
T COG1541 300 PLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVL 353 (438)
T ss_pred ceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHH
Confidence 22359999999997642 2569999999999999999999999874
No 128
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.90 E-value=1.8e-22 Score=199.49 Aligned_cols=417 Identities=19% Similarity=0.188 Sum_probs=257.3
Q ss_pred cHHHHHHHHHHhcCCcceEEec---C----CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHH
Q 014065 5 TLIGLLNQVIDQFSSKRALSVS---G----KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIR 77 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~---~----~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~ 77 (431)
++...+.+.+...|.+.+..+- . -..+||++.....+.+++.|...|..+|+.|++++..+.++++..++.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~ 116 (1032)
T KOG1178|consen 37 TLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLA 116 (1032)
T ss_pred chhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhh
Confidence 4556778888888888887642 1 15899999999999999999999999999999999999999999999999
Q ss_pred hCcEEEecCCCCCHHHHHHHHhcCCceEEEec-CCchhHHHHHHHhc-C-cccccccccccchhhhhhhccccccccccc
Q 014065 78 ARATAAPLNAAYTPDEFEFYLSDSESKLLLTP-AEGNAAAQAAASKL-N-ISHATATLLDADSELTLSLAHSESDTNAIS 154 (431)
Q Consensus 78 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~-~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (431)
+|..+++++|.++.-++...+.+. +...... .+............ . .+...+ ..... .+.... .......
T Consensus 117 ~g~~~~~idp~~~~~e~~~~~~~i-a~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv--~~~~~--~f~~~~--~~~~~r~ 189 (1032)
T KOG1178|consen 117 AGLTFLPIDPSWPNSELAGYLMRI-AHFLTSVELEIVRRLNIIDILLNSLFPKLSV--ETIAD--SFQMVL--HNEDTRE 189 (1032)
T ss_pred cceEEEEecCCCcccccchHHHhh-hhhheeccceehhhhhhHHHHhhccccccch--hhccc--hhhhhh--ccCCCcc
Confidence 999999999999911111111111 0000000 11111110000000 0 000000 00000 001000 1111111
Q ss_pred cCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC
Q 014065 155 KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234 (431)
Q Consensus 155 ~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 234 (431)
-....++..+.+.||||+||.||+|..+|..++....+....+....++++-.....+............|..|..+..|
T Consensus 190 ~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p 269 (1032)
T KOG1178|consen 190 IRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVP 269 (1032)
T ss_pred eeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchHHHHhhHhhcCceeecc
Confidence 22344677889999999999999999999999999988888888877776522222323323233233445555555554
Q ss_pred CCCCC-ChhhHHHHHHHhcceeeecchHHHHHHHhcccCC------------CCCCCCCccEEEeccCCCcHHHHHHHHH
Q 014065 235 AAGRF-SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK------------PEPVYPKLRFIRSCSASLAPVILSRLEE 301 (431)
Q Consensus 235 ~~~~~-~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~------------~~~~~~~l~~i~~~g~~~~~~~~~~~~~ 301 (431)
.+..- .+..+.+.+++++++..+.+|++.++++...... .....+.++....+|++..-.++..+..
T Consensus 270 ~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~ 349 (1032)
T KOG1178|consen 270 TATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFD 349 (1032)
T ss_pred cccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhhhhhhhh
Confidence 42111 3789999999999999999999988876544321 0111358899999999999999986665
Q ss_pred HhCCc-eecccCcccccCcccCCCCCCCC-CCCCCCccccc------c--ceEEEECCCCCcCCCCceeeE----EEeCC
Q 014065 302 AFGAP-VLEAYAMTEATHLMSSNPLPEDG-PHKPGSVGRPV------G--QEIAILDEIGVPQEGGAKGEV----CIRGP 367 (431)
Q Consensus 302 ~~~~~-i~~~yg~tE~~~~~~~~~~~~~~-~~~~~~~G~~~------~--~~~~i~d~~~~~~~~~~~Gel----~v~~~ 367 (431)
.+-.. ...-|+.++..+........... .....-++.+. + ....+....|.+.+.+..+.. ...++
T Consensus 350 ~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~ 429 (1032)
T KOG1178|consen 350 LLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLYRAGGEGEGGVGKGCLGAEQNLSS 429 (1032)
T ss_pred cccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeeeccCcccCCcccceeecccccccc
Confidence 55222 22338888877766654432110 01111111111 1 223333333444444332222 22334
Q ss_pred ccccccccCcchhhhc--cc----CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 368 NVTKGYKNNPEANKSA--FL----FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 368 ~~~~gy~~~~~~~~~~--~~----~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.+..||. .++..... +. +.+|+|||.|+..++|.+.+.||.|++||.+|.++...||+++-
T Consensus 430 ~~~~g~~-~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v 496 (1032)
T KOG1178|consen 430 WVVDGYS-TPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVV 496 (1032)
T ss_pred eeecccc-chhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhh
Confidence 5555532 22221111 22 35999999999999999999999999999999999999999863
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.82 E-value=5.4e-19 Score=170.45 Aligned_cols=411 Identities=15% Similarity=0.191 Sum_probs=278.5
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCC----CcccHHHHHHHHHHHHH-HHHHcCCCCCCEEEEECCCc--HHHHHHHHHHH
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGK----FDLTYSRIHELVERAAS-RLVAAGINAGDVVALTFPNT--VEFVIMFLAVI 76 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~----~~~Ty~el~~~~~~~a~-~L~~~gl~~gd~V~i~~~n~--~~~~~~~lA~~ 76 (431)
..+..+++.+-..++...|.+.-++ .++||..+..|+.++|+ .|-+-|+.++|+|.++...+ .++++..++|.
T Consensus 94 ~d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~ 173 (1363)
T KOG3628|consen 94 TDIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCF 173 (1363)
T ss_pred cchHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhcccc
Confidence 4466777777677888888886442 68999999999999999 56667999999999998775 89999999999
Q ss_pred HhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccC
Q 014065 77 RARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKL 156 (431)
Q Consensus 77 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (431)
..|.+.+|+.+..+.+++..+++..+.+++++...............+..+....+... .+. -.........+
T Consensus 174 l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w~t~----~~k---~~~~~~k~~~P 246 (1363)
T KOG3628|consen 174 LLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWWKTN----DFK---GNYTKDKIKKP 246 (1363)
T ss_pred ccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhhhcc----ccc---ceeehhhccCC
Confidence 99999999999999999999999999999998876554443322111111111111000 000 00011111222
Q ss_pred CCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHH--------------------HHHhcCCCCCeEEEecChhhHHH
Q 014065 157 TNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNI--------------------KSVYKLTESDSTVIVLPLFHVHG 216 (431)
Q Consensus 157 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~--------------------~~~~~~~~~~~~~~~~p~~~~~~ 216 (431)
...-. ..+|-||.+++|.--++..+|+ ++.+.+.. ...++...++..+..+...-..|
T Consensus 247 ~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lG 324 (1363)
T KOG3628|consen 247 RMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLG 324 (1363)
T ss_pred ceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccccc
Confidence 22223 7899999999999888998888 43332221 12233455677777777777789
Q ss_pred HHHHHHHHHhcCCEEEeCCCCC-CChhhHHHHHHHhcceeeecchHHHHHHHhcccCC----------CCCCCCCccEEE
Q 014065 217 MLAGLLSSFAAGAAVTLPAAGR-FSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAK----------PEPVYPKLRFIR 285 (431)
Q Consensus 217 ~~~~~~~~l~~G~~~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~----------~~~~~~~l~~i~ 285 (431)
++.+++.+++.|.+.+.++... ..+..+...+.+++++++..-...+.......... ...+++++|.+.
T Consensus 325 lilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~C~ 404 (1363)
T KOG3628|consen 325 LILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKGCM 404 (1363)
T ss_pred hhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceeeeE
Confidence 9999999999999999887422 36778889999999999887766666554322211 124689999999
Q ss_pred eccCCCcHHHHHHHHHHh----CCce------------------ecccCcccccCcccCCCCCCCCCC------------
Q 014065 286 SCSASLAPVILSRLEEAF----GAPV------------------LEAYAMTEATHLMSSNPLPEDGPH------------ 331 (431)
Q Consensus 286 ~~g~~~~~~~~~~~~~~~----~~~i------------------~~~yg~tE~~~~~~~~~~~~~~~~------------ 331 (431)
+....+..+...-....+ |... ..+=+++|.+......+. .....
T Consensus 405 Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~-~~~~~~~~e~ll~~~~L 483 (1363)
T KOG3628|consen 405 VTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPE-QMADTLPGEGLLSKEAL 483 (1363)
T ss_pred EeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcc-cccccCccceeeecccc
Confidence 999999988776665554 2210 111122455444333322 00000
Q ss_pred ----------------CCCCccccc--cceEEEECCC-CCcCCCCceeeEEEeCCccccccccCcchhhhcccC------
Q 014065 332 ----------------KPGSVGRPV--GQEIAILDEI-GVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF------ 386 (431)
Q Consensus 332 ----------------~~~~~G~~~--~~~~~i~d~~-~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~------ 386 (431)
....+|... ...+.|++++ ...|..+++|||||.+++...+|+.-+..+...|..
T Consensus 484 ~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~ 563 (1363)
T KOG3628|consen 484 KLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESS 563 (1363)
T ss_pred ccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccceeeccccccceEEeeecccc
Confidence 000223332 3666677755 788999999999999999999999877666655521
Q ss_pred -------CceecCceEEEcCCCeEEEecccccce-ecCCeeccccce
Q 014065 387 -------GWFHTGDIGYFDSDGYLHLVGRIKELI-NRGGNLHESISL 425 (431)
Q Consensus 387 -------g~~~TGD~~~~~~~g~l~~~gR~~d~i-~~~G~~i~~~~i 425 (431)
-|++||-+||+.+++ ++++|-.+|.+ -+.|.+++..+|
T Consensus 564 ~~~~~n~~FmRtGLlGFv~~gk-i~vl~~k~d~llq~~~~~h~~d~i 609 (1363)
T KOG3628|consen 564 GKPPSNVPFMRTGLLGFVHNGK-IYVLGLKEDGLLQVSGWRHNADDI 609 (1363)
T ss_pred CCCCccchhhhhcceeeeeCCe-EEEEEechhhhhhhhhhhhhhhhh
Confidence 299999999996666 55555555544 478888776654
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.69 E-value=9.2e-16 Score=142.39 Aligned_cols=226 Identities=15% Similarity=0.079 Sum_probs=146.2
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHH-HHH--hcCCCCCeEEEecCh-hhHHHHHHHHHHHHhcCCE-EEeCCCC
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNI-KSV--YKLTESDSTVIVLPL-FHVHGMLAGLLSSFAAGAA-VTLPAAG 237 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~-~~~--~~~~~~~~~~~~~p~-~~~~~~~~~~~~~l~~G~~-~~~~~~~ 237 (431)
-..+..||||||.|-.+..+........... ... .++..++++...+.. .+.+ .++..... +-..+-
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~~ly-------~~~~~~~~~~~~~~l- 172 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADNNLY-------QSVNNRWISLDFFDL- 172 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccChhHH-------HHHHhccceeeecCC-
Confidence 3567789999999999999988754332222 222 245555666555321 1221 11212111 222221
Q ss_pred CCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCccccc
Q 014065 238 RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEAT 317 (431)
Q Consensus 238 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~ 317 (431)
.-+.+.+++.|++++|+++.+.|+.+..|+++...... . .+++.++++||.++++..+.+++.||+++++.||+|| |
T Consensus 173 ~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l-~-~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g 249 (430)
T TIGR02304 173 LAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGEL-T-IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-G 249 (430)
T ss_pred CcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCC-C-CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-h
Confidence 23688999999999999999999999999987655332 2 4789999999999999999999999999999999999 5
Q ss_pred CcccCCCCCCCCCCCCCCccccc---cceEE--EECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecC
Q 014065 318 HLMSSNPLPEDGPHKPGSVGRPV---GQEIA--ILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTG 392 (431)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~G~~~---~~~~~--i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TG 392 (431)
.+...+.. + +.-+ ...++ ++|++++ ++.++++ +.+. .++---|+||
T Consensus 250 ~la~eC~~--------g--~lHl~ed~~~vE~~ivD~~~~-------~~~ViT~------L~n~------~~PlIRYrtG 300 (430)
T TIGR02304 250 FLASTCRC--------G--TLHLNEDLVHIEKQYLDEHKR-------FVPIITD------FTRT------TQPIVRYRLN 300 (430)
T ss_pred heEEecCC--------C--CEEEccccEEEEeeEECCCCc-------eEEEEec------CCCc------cceEEeeeCC
Confidence 44333211 1 1112 13344 7887653 3346655 2211 1111249999
Q ss_pred ceEEEcCC----C----eE-EEecccccceec---CCeec--cccceecc
Q 014065 393 DIGYFDSD----G----YL-HLVGRIKELINR---GGNLH--ESISLFLA 428 (431)
Q Consensus 393 D~~~~~~~----g----~l-~~~gR~~d~i~~---~G~~i--~~~~iE~a 428 (431)
|++...++ | .+ .+.||.+|+++. +|..+ +|..++.+
T Consensus 301 D~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~ 350 (430)
T TIGR02304 301 DILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRV 350 (430)
T ss_pred CEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHH
Confidence 99988544 2 23 388999999974 45554 77766643
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.23 E-value=3.6e-09 Score=96.37 Aligned_cols=240 Identities=18% Similarity=0.233 Sum_probs=144.4
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH---h-cCCC-CCeEEEecChhhHH-HH---HHHHHHHHhcCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV---Y-KLTE-SDSTVIVLPLFHVH-GM---LAGLLSSFAAGA 229 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~-~~~~-~~~~~~~~p~~~~~-~~---~~~~~~~l~~G~ 229 (431)
..+++..++.||||||.|--+.+.+..+..+...+... + +... ...++...|-.... .+ ....+..+..++
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 35667889999999999866777666655444333322 2 2222 23344444432211 11 122333344555
Q ss_pred EEEeCCCCCCChhhHHHHHH----HhcceeeecchHHHHHHHhcccCCC-CCCCC-CccEEEeccC------CCc-HHHH
Q 014065 230 AVTLPAAGRFSASTFWQDMI----KYNATWYTAVPTIHQIVLDRHVAKP-EPVYP-KLRFIRSCSA------SLA-PVIL 296 (431)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~----~~~~t~~~~~p~~~~~l~~~~~~~~-~~~~~-~l~~i~~~g~------~~~-~~~~ 296 (431)
.-.+ ....++.+.+++.+. +.++-.+++.|.++-.++....+.. ...++ ..+.+-.||. .++ .++.
T Consensus 167 ~~~l-~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 167 RFAL-DNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred eeee-cCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 5444 333567777777665 3467888888886666665544332 22233 4566666763 364 4677
Q ss_pred HHHHHHhCC----ceecccCcccccCcccCCCCCCCCCCCCCCccccccceEEEECC-CCCcCCCCceeeEEEeCCcccc
Q 014065 297 SRLEEAFGA----PVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPVGQEIAILDE-IGVPQEGGAKGEVCIRGPNVTK 371 (431)
Q Consensus 297 ~~~~~~~~~----~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~i~d~-~~~~~~~~~~Gel~v~~~~~~~ 371 (431)
+.+++.||+ .+++.||+||.....+.+.. .. .+.+..+.|+|+ +.++++.|+.|-|-+-.+...
T Consensus 246 ~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~----~~------~~~p~wV~iRDp~tl~~~~~Ge~Gli~vidl~~~- 314 (365)
T PF04443_consen 246 ARLQEVFGVIPIENIYDMYGMTELNSQAYECGH----GH------FHVPPWVIIRDPETLEPLPPGETGLIQVIDLANT- 314 (365)
T ss_pred HHHHHHHCCCCHHHeeeeeeccccchhheeCCC----Cc------ccCCCeEEEECCCCCcCCCCCCeeEEEEEccccc-
Confidence 778888987 69999999997755443321 00 122222778884 478999999999988765322
Q ss_pred ccccCcchhhhcccCCceecCceEEEcCC--------CeEEEecccccceecCCeecccc
Q 014065 372 GYKNNPEANKSAFLFGWFHTGDIGYFDSD--------GYLHLVGRIKELINRGGNLHESI 423 (431)
Q Consensus 372 gy~~~~~~~~~~~~~g~~~TGD~~~~~~~--------g~l~~~gR~~d~i~~~G~~i~~~ 423 (431)
.|. +..-|.|+|.+..+ .++.++||.+.-= ++|+....+
T Consensus 315 s~p------------~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ae-~RGCs~~~~ 361 (365)
T PF04443_consen 315 SYP------------GFILTEDLGVLHGDDDCGCRKGKYFEVLGRADGAE-IRGCSLTFA 361 (365)
T ss_pred CCC------------cEEEEcceeeecCCCCCCCccCCEEEEEeCCCCCc-cCCcHHHHH
Confidence 111 23679999988654 2799999988643 456655433
No 132
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.54 E-value=4.2e-08 Score=94.69 Aligned_cols=126 Identities=19% Similarity=0.297 Sum_probs=76.9
Q ss_pred CCCccEEEeccCCCcHHHHHHHHHHhC-Cce-ecccCcccccCcccCCCCCCCCCCCCCCccccc---cceEEEEC--CC
Q 014065 278 YPKLRFIRSCSASLAPVILSRLEEAFG-APV-LEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV---GQEIAILD--EI 350 (431)
Q Consensus 278 ~~~l~~i~~~g~~~~~~~~~~~~~~~~-~~i-~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d--~~ 350 (431)
.|+++.+.+.+..-...-.+.+++.++ +.+ ...|++||+-..+... ++..+.++ ..-.+.++ +.
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i~i~~~---------~~~~~~~l~~~~~ffEFip~~~~ 336 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFIGIPLD---------PEDPGYVLAPDSGFFEFIPVDED 336 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEEEEES----------CCC--EEE-TTSSEEEEEE-STT
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEEEEecC---------CCCCceEeecCCeEEEEEeccCC
Confidence 689998777766666677777777774 444 4779999964332221 11122222 22333333 21
Q ss_pred C------------CcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcC--CC--eEEEeccccccee
Q 014065 351 G------------VPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDS--DG--YLHLVGRIKELIN 414 (431)
Q Consensus 351 ~------------~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~--~g--~l~~~gR~~d~i~ 414 (431)
+ ..+..|+..||+++. ..|.|. |+.||++++.. ++ .+.|+||.+.++.
T Consensus 337 ~~~~~~~~~~l~~~ele~G~~YelviTt---~~GLyR-------------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~ 400 (528)
T PF03321_consen 337 EQNPSEQPKTLLLHELEVGEEYELVITT---NSGLYR-------------YRIGDVVRVTGFYNQTPRIEFVGRRGQVLS 400 (528)
T ss_dssp -------SSSEEGGG--TT-EEEEEEES---TTS-SS-------------EEECEEEEEEEEETTEEEEEEEEETTEEE-
T ss_pred cccccCCCceecHHHhcCCCeEEEEEec---ccceee-------------eecCCEEEEeeccCCCcEEEEeccCCceee
Confidence 1 246778889999987 356554 99999999853 44 7999999999999
Q ss_pred cCCeeccccceecc
Q 014065 415 RGGNLHESISLFLA 428 (431)
Q Consensus 415 ~~G~~i~~~~iE~a 428 (431)
+.|++++-.+|+.|
T Consensus 401 l~gEkl~e~~v~~a 414 (528)
T PF03321_consen 401 LFGEKLSEEQVQEA 414 (528)
T ss_dssp SSS--EEHHHHHHH
T ss_pred cceeecCHHHHHHH
Confidence 99999999988876
No 133
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.37 E-value=1.8e-07 Score=85.39 Aligned_cols=40 Identities=18% Similarity=0.120 Sum_probs=36.0
Q ss_pred ccCCceecCceEEE-cCCCeEEEecccccceecCC---eeccccceeccc
Q 014065 384 FLFGWFHTGDIGYF-DSDGYLHLVGRIKELINRGG---NLHESISLFLAK 429 (431)
Q Consensus 384 ~~~g~~~TGD~~~~-~~~g~l~~~gR~~d~i~~~G---~~i~~~~iE~a~ 429 (431)
+.+|||+|||+|++ |+||+++|.||.+ +| ++|+|. ||.+.
T Consensus 206 ~~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L 249 (365)
T PRK09188 206 PSRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAAL 249 (365)
T ss_pred ccCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHH
Confidence 46799999999998 7999999999998 78 899999 99763
No 134
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.11 E-value=0.00011 Score=71.49 Aligned_cols=128 Identities=22% Similarity=0.285 Sum_probs=79.3
Q ss_pred CCCCc---cEEEeccCCCcHHHHHHHHHHh-CCc-eecccCcccccCcccCCCCCCCCCCCCCCccccc---cceEEEEC
Q 014065 277 VYPKL---RFIRSCSASLAPVILSRLEEAF-GAP-VLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV---GQEIAILD 348 (431)
Q Consensus 277 ~~~~l---~~i~~~g~~~~~~~~~~~~~~~-~~~-i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~---~~~~~i~d 348 (431)
..|++ ..+..||-. .-...++..+ +.. +...|++||+-..+-..+. ..+..++.-+ +.-.+.++
T Consensus 300 lWPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~gi~~~~~-----~~p~~~~~~l~~~~~ffEFiP 371 (597)
T PLN02249 300 IWPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYFGINLNPM-----CKPSEVSYTIMPNMAYFEFLP 371 (597)
T ss_pred hCCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceEEEeecCCC-----CCCCCcceEecCCcEEEEeee
Confidence 35774 444555544 4445555445 443 4578999996533322211 1111122221 23333332
Q ss_pred --CCC------------CcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcC----CCeEEEecccc
Q 014065 349 --EIG------------VPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDS----DGYLHLVGRIK 410 (431)
Q Consensus 349 --~~~------------~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~~~gR~~ 410 (431)
+.| ..++.|+.-+|+|+. ..|.|. |+.||++++.. --.+.|+||.+
T Consensus 372 ~~~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT---~~GLyR-------------Y~iGDvVrvtgf~~~~P~i~F~gR~~ 435 (597)
T PLN02249 372 HNHDGDGALDETSLVELADVEVGKEYELVITT---YAGLYR-------------YRVGDILRVTGFHNSAPQFKFIRRKN 435 (597)
T ss_pred cccCCcccCCCCcEecHHHcCCCCeEEEEEEc---ccceeE-------------eecCCEEEEeeccCCCcEEEEEccCC
Confidence 211 135678888999987 445554 99999999863 33799999999
Q ss_pred cceecCCeeccccceecc
Q 014065 411 ELINRGGNLHESISLFLA 428 (431)
Q Consensus 411 d~i~~~G~~i~~~~iE~a 428 (431)
.++.+.|++++-.+++.|
T Consensus 436 ~~ls~~GEKl~e~~v~~A 453 (597)
T PLN02249 436 VLLSIESDKTDEADLQKA 453 (597)
T ss_pred cceecccccCCHHHHHHH
Confidence 999999999999999886
No 135
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=98.10 E-value=0.0003 Score=68.13 Aligned_cols=131 Identities=19% Similarity=0.291 Sum_probs=84.6
Q ss_pred CCCCccEEEeccCCCcHHHHHHHHHHh-CCcee-cccCcccccCcccCCCCCCCCCCCCCCccccc--c-ceEEEEC-CC
Q 014065 277 VYPKLRFIRSCSASLAPVILSRLEEAF-GAPVL-EAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV--G-QEIAILD-EI 350 (431)
Q Consensus 277 ~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~-~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~--~-~~~~i~d-~~ 350 (431)
..|+++.|-+.-..-...-...++-.+ |++++ .+|++||+-.-+-..+. ..+..+..++ + .-.+.++ ++
T Consensus 291 LWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p~-----~~p~~~sy~L~p~~~yFEFip~~~ 365 (606)
T PLN02247 291 LWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKPL-----SDPSDVSYTLLPNMAYFEFLPVDK 365 (606)
T ss_pred hCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCcC-----CCccCCceeecCCcEEEEEeecCC
Confidence 368888887766666666667776544 67766 57999996543333221 1112222222 2 2333332 11
Q ss_pred C-----------------------------CcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEc---
Q 014065 351 G-----------------------------VPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFD--- 398 (431)
Q Consensus 351 ~-----------------------------~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~--- 398 (431)
+ ..++.|+.-||+|+. ..|.+. |+.||+.++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt---~~GLYR-------------YrlGDvv~V~GF~ 429 (606)
T PLN02247 366 NNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTT---FTGLYR-------------YRVGDILMVTGFY 429 (606)
T ss_pred CcccccccccccccccccccccccCceecHHHccCCCeEEEEEEe---cCceEE-------------EecCCEEEEeeec
Confidence 1 135678888999986 445443 9999999974
Q ss_pred -CCCeEEEecccccceecCCeeccccceecc
Q 014065 399 -SDGYLHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 399 -~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
..-.+.|++|.+.+..+.|++.+-.++-.|
T Consensus 430 n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~A 460 (606)
T PLN02247 430 NNAPQFRFVQRRNVVLSIDTDKTNEEDLLKA 460 (606)
T ss_pred CCCceEEEEecCCceeecccccCCHHHHHHH
Confidence 445899999999999999999987776443
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.98 E-value=0.00036 Score=67.42 Aligned_cols=131 Identities=18% Similarity=0.280 Sum_probs=84.5
Q ss_pred CCCCccEEEeccCCCcHHHHHHHHHHh-CCcee-cccCcccccCcccCCCCCCCCCCCCCCccccc--c-ceEEEEC--C
Q 014065 277 VYPKLRFIRSCSASLAPVILSRLEEAF-GAPVL-EAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV--G-QEIAILD--E 349 (431)
Q Consensus 277 ~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~-~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~--~-~~~~i~d--~ 349 (431)
..|+++.|-+....-...-...++-.+ |+++. ..|++||+-.-+-.++. ..+..+..++ + .-.+.++ +
T Consensus 302 LWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~-----~~p~~~sy~L~p~~~yFEFip~~~ 376 (612)
T PLN02620 302 LWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPL-----CKPSEVSYTLIPTMAYFEFLPVHR 376 (612)
T ss_pred hCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCCC-----CCcccceeeecCCcEEEEEeeccC
Confidence 368888887766666666666665444 67766 66999996544333332 1112222222 1 2233332 1
Q ss_pred -C-----------------C-----CcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEc----CCCe
Q 014065 350 -I-----------------G-----VPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFD----SDGY 402 (431)
Q Consensus 350 -~-----------------~-----~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~----~~g~ 402 (431)
+ + ..++.|+.-|++|+. ..|.+. |+.||+.++. ..-.
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt---~~GLyR-------------YrlGDvv~V~Gf~n~~P~ 440 (612)
T PLN02620 377 NNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTT---YAGLYR-------------YRVGDVLRVAGFKNKAPQ 440 (612)
T ss_pred cccccccccccccccccccCccccHHHccCCCeEEEEEEe---cCceEE-------------EecCCEEEEeeecCCCce
Confidence 1 1 125678888999986 445443 9999999984 3457
Q ss_pred EEEecccccceecCCeeccccceecc
Q 014065 403 LHLVGRIKELINRGGNLHESISLFLA 428 (431)
Q Consensus 403 l~~~gR~~d~i~~~G~~i~~~~iE~a 428 (431)
+.|++|.+.+..+.|++.+-.++-.|
T Consensus 441 ~~Fv~R~~~~lsi~gEK~tE~~l~~A 466 (612)
T PLN02620 441 FSFICRKNVVLSIDSDKTDEVELQNA 466 (612)
T ss_pred EEEEeecCceeecccccCCHHHHHHH
Confidence 99999999999999999987776544
No 137
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=96.20 E-value=0.045 Score=50.92 Aligned_cols=95 Identities=18% Similarity=0.168 Sum_probs=79.1
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc--HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNT--VEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
--+|+.|....+..+|+.|...|..+||+|.....-+ ..-+.+.+|+.++|+.++|+.+. ..+.-..++++.++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 3589999999999999999999999999988887622 12267889999999999999884 45566788999999999
Q ss_pred EecCCchhHHHHHHHhcC
Q 014065 107 LTPAEGNAAAQAAASKLN 124 (431)
Q Consensus 107 i~~~~~~~~~~~~~~~~~ 124 (431)
.+.+...-.+.+.+.+..
T Consensus 187 ~~tps~~l~lae~~~~~G 204 (438)
T COG1541 187 AATPSYLLYLAEEAEEEG 204 (438)
T ss_pred EEChHHHHHHHHHHHHcC
Confidence 999998777777766653
No 138
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=90.78 E-value=2.5 Score=40.56 Aligned_cols=81 Identities=17% Similarity=0.137 Sum_probs=61.9
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH--HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE--FVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
.-+|..++...+...+..+...|+++||++.+..+.+.. .....+++...|+..++... .+....+++..++..+
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 347899999888888988888899999999998876542 33456788999998876643 2344677888999988
Q ss_pred EecCCc
Q 014065 107 LTPAEG 112 (431)
Q Consensus 107 i~~~~~ 112 (431)
+.....
T Consensus 181 ~~~ps~ 186 (445)
T TIGR03335 181 VASVFK 186 (445)
T ss_pred EECHHH
Confidence 876543
No 139
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=90.73 E-value=2.5 Score=40.27 Aligned_cols=88 Identities=13% Similarity=0.130 Sum_probs=66.9
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH--HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTV--EFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
..+|..++......++..+...|+++||++....+.+. ......+++...|+..+++++.. .+.+...+++.+++++
T Consensus 93 v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 93 VGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred eccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 34688888777777788888889999999887665542 22334677889999999887764 5678889999999999
Q ss_pred EecCCchhHHH
Q 014065 107 LTPAEGNAAAQ 117 (431)
Q Consensus 107 i~~~~~~~~~~ 117 (431)
+..+.....+.
T Consensus 172 ~~~Ps~l~~L~ 182 (422)
T TIGR02155 172 MVTPSYMLNLL 182 (422)
T ss_pred EEcHHHHHHHH
Confidence 99887655443
No 140
>PLN02736 long-chain acyl-CoA synthetase
Probab=82.60 E-value=35 Score=34.71 Aligned_cols=101 Identities=11% Similarity=-0.043 Sum_probs=72.7
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.++|++...++-... +....++++..|+.++.... .+.++.+...+++.+++.
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~-~~~~~~l~~il~~~~~~~ 153 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPE--WLIVDHACSAYSYVSVPLYD-TLGPDAVKFIVNHAEVAA 153 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeec-CCCHHHHHHHHhccCCCE
Confidence 45788888777665544 4589999999888875443 34447888889998886543 678999999999999999
Q ss_pred eecchHHHHHHHhcccCCCCCCCCCccEEEec
Q 014065 256 YTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSC 287 (431)
Q Consensus 256 ~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~ 287 (431)
++..+..+..+...... ++.++.++..
T Consensus 154 l~~~~~~~~~~~~~~~~-----~~~l~~ii~~ 180 (651)
T PLN02736 154 IFCVPQTLNTLLSCLSE-----IPSVRLIVVV 180 (651)
T ss_pred EEECHHHHHHHHHHhhc-----CCCceEEEEE
Confidence 99998877766543221 3455555543
No 141
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=81.22 E-value=12 Score=32.21 Aligned_cols=54 Identities=22% Similarity=0.289 Sum_probs=43.6
Q ss_pred HHcCCCCCCEEEEECCCcH--HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCc
Q 014065 48 VAAGINAGDVVALTFPNTV--EFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSES 103 (431)
Q Consensus 48 ~~~gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 103 (431)
...|++++|++. .+|-.. -....+++++..|++.+.+ +..+.+.+-..+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556899999999 888754 3445789999999998888 68888888888887765
No 142
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=81.16 E-value=18 Score=34.18 Aligned_cols=89 Identities=19% Similarity=0.237 Sum_probs=65.1
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
.++.++++. -....+|.+.+...+..+.. ..++++++++....+-.. .++..+++++..|...+..+
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~--~~~~~~~A~~~~G~~~v~l~ 77 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSI--EFVVAFLACLRAGAIPVPLD 77 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSH--HHHHHHHHHHHTT-EEEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccc--eeeeeecccccccccccccc
Confidence 456667655 23457888888766665443 457888998888877643 34555888899999998765
Q ss_pred CCCCChhhHHHHHHHhcceeeec
Q 014065 236 AGRFSASTFWQDMIKYNATWYTA 258 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~ 258 (431)
+ ......+...+++.++++++.
T Consensus 78 ~-~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 78 P-SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp T-TSSHHHHHHHHHHHTESEEEE
T ss_pred c-ccccccccccccccceeEEEE
Confidence 4 668899999999999999995
No 143
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=78.75 E-value=25 Score=27.38 Aligned_cols=56 Identities=18% Similarity=0.006 Sum_probs=38.9
Q ss_pred eEEEecCh-hhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecch
Q 014065 204 STVIVLPL-FHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVP 260 (431)
Q Consensus 204 ~~~~~~p~-~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p 260 (431)
+++...+. .|..|........-..|..++.... ..+++++.+.+.++++..+.++-
T Consensus 6 vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~-~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 6 VVLGVIGADCHAVGNKILDRALTEAGFEVINLGV-MTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCC-CCCHHHHHHHHHHcCCCEEEEcC
Confidence 34444443 6777876644444566777766542 67899999999999998877663
No 144
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=76.21 E-value=40 Score=33.27 Aligned_cols=89 Identities=17% Similarity=0.129 Sum_probs=70.7
Q ss_pred eeeechHHHHHHHHHHHHHhc-----CCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhc
Q 014065 178 GVPLTQNNLAASVSNIKSVYK-----LTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYN 252 (431)
Q Consensus 178 ~v~~s~~~l~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~ 252 (431)
+..+|+..+...+..++..+. ++++|++....|-...+. ...++++..|+.+.-..+ .++..++...++..+
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~--~~~la~~~~Ga~~~~~Np-~~~~~ei~~~~~~s~ 119 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV--ELALAVPMAGAVLNPLNP-RLTASEIAKQLKDSK 119 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCccccccCc-ccCHHHHHHHHHhcC
Confidence 678999998888777666553 688999999999755443 336788888888875543 789999999999999
Q ss_pred ceeeecchHHHHHHHhc
Q 014065 253 ATWYTAVPTIHQIVLDR 269 (431)
Q Consensus 253 ~t~~~~~p~~~~~l~~~ 269 (431)
++.++.....+..+...
T Consensus 120 ~kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 120 PKLIFVDEDFYDKISEA 136 (537)
T ss_pred CeEEEEcCchHHHHHHH
Confidence 99999998888887544
No 145
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=76.18 E-value=22 Score=34.69 Aligned_cols=84 Identities=20% Similarity=0.156 Sum_probs=62.9
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH--HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTV--EFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
..+|+..+...+..+... .+++++|++...++... .+...+++++..|+..++. +..+.+.+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 457888887766555443 37889999988887643 3455678999999988775 55678889999999999999
Q ss_pred EecCCchhHH
Q 014065 107 LTPAEGNAAA 116 (431)
Q Consensus 107 i~~~~~~~~~ 116 (431)
...+.....+
T Consensus 260 ~~~p~~~~~l 269 (513)
T PRK07656 260 PGPPTMYNSL 269 (513)
T ss_pred echHHHHHHH
Confidence 8877644443
No 146
>PLN03052 acetate--CoA ligase; Provisional
Probab=74.84 E-value=49 Score=34.25 Aligned_cols=99 Identities=18% Similarity=0.208 Sum_probs=70.0
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
.++.++++....+..+.+ ...+|...|...+..+.. ..++.++|++...+|..- ..+..+++++..|+..+...
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~--e~via~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNV--HAVIIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH--HHHHHHHHHHHcCCEEEeeC
Confidence 356666654333221222 245788888766665544 458899999999998643 33445888899999988665
Q ss_pred CCCCChhhHHHHHHHhcceeeecchH
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPT 261 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~ 261 (431)
+ .+.++.+...+++.+++.++....
T Consensus 265 p-~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 265 D-SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred C-CCCHHHHHHHHHhcCceEEEEcCc
Confidence 4 778999999999999999887654
No 147
>PLN02565 cysteine synthase
Probab=74.48 E-value=50 Score=30.14 Aligned_cols=80 Identities=11% Similarity=-0.018 Sum_probs=56.3
Q ss_pred cccHHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 30 DLTYSRIHELVERAASRLVAAGI-NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+-||++= -+..+-..+.+.|. .+|....+....+-.-+.+.++|...|..++.+=|..........++..+++++++
T Consensus 42 tGSfKdR--~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~ 119 (322)
T PLN02565 42 CSSVKDR--IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLT 119 (322)
T ss_pred ccchHHH--HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEe
Confidence 3345442 23333444445564 78865445555566667777888889998888878778888899999999999999
Q ss_pred cCC
Q 014065 109 PAE 111 (431)
Q Consensus 109 ~~~ 111 (431)
++.
T Consensus 120 ~~~ 122 (322)
T PLN02565 120 DPA 122 (322)
T ss_pred CCC
Confidence 864
No 148
>PRK11761 cysM cysteine synthase B; Provisional
Probab=72.98 E-value=50 Score=29.72 Aligned_cols=79 Identities=10% Similarity=0.019 Sum_probs=54.8
Q ss_pred CcccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLL 107 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 107 (431)
.+=|+++ +-+..+...+.+.| +.+|+.|.. ...+-.-..+.++|.+.|..+..+-|..........++..++++++
T Consensus 38 ptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~ 114 (296)
T PRK11761 38 PAGSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELIL 114 (296)
T ss_pred CCCCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEE
Confidence 3445555 33333444445555 467776654 4455666777788889999877777776667788899999999999
Q ss_pred ecC
Q 014065 108 TPA 110 (431)
Q Consensus 108 ~~~ 110 (431)
++.
T Consensus 115 ~~~ 117 (296)
T PRK11761 115 VPK 117 (296)
T ss_pred eCC
Confidence 986
No 149
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=72.90 E-value=55 Score=33.32 Aligned_cols=79 Identities=15% Similarity=0.173 Sum_probs=61.9
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.++|++...+|..-- +...+++++..|+..+.... .+.++.+...+++.+++.
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e--~~~~~lA~~~~Gav~vpl~~-~~~~~~l~~~l~~~~~~~ 167 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLE--PLIAMLSCARIGATHCVLFD-GYSVKSLIDRIETITPKL 167 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCcEEEeeCC-CCCHHHHHHHHHhcCCCE
Confidence 56899998777666554 4589999999999986443 34447888889998876554 779999999999999999
Q ss_pred eecch
Q 014065 256 YTAVP 260 (431)
Q Consensus 256 ~~~~p 260 (431)
++...
T Consensus 168 li~~~ 172 (647)
T PTZ00237 168 IITTN 172 (647)
T ss_pred EEEcc
Confidence 98754
No 150
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=72.19 E-value=27 Score=34.03 Aligned_cols=83 Identities=8% Similarity=-0.042 Sum_probs=62.1
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 30 DLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE-FVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
.+|++.+......... ..+++++|++....+.... .+...++++..|+..+..+.. +.+.+...+++.++..+++
T Consensus 186 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~ 261 (521)
T PRK06187 186 VLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFFA 261 (521)
T ss_pred EeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEEc
Confidence 5788888876665555 4488999999888876433 334455688899988877665 8888999999999999998
Q ss_pred cCCchhHH
Q 014065 109 PAEGNAAA 116 (431)
Q Consensus 109 ~~~~~~~~ 116 (431)
.+.....+
T Consensus 262 ~p~~~~~l 269 (521)
T PRK06187 262 VPTIWQML 269 (521)
T ss_pred hHHHHHHH
Confidence 77654443
No 151
>PLN02654 acetate-CoA ligase
Probab=72.14 E-value=62 Score=33.06 Aligned_cols=80 Identities=21% Similarity=0.296 Sum_probs=62.9
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...|...+..+.. ..+++++|++...+|..- ..+..+++++..|+..+...+ .+..+.+...+++.+++.
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~--e~v~a~lA~~~~Gav~vpv~~-~~~~~~l~~~l~~~~~~~ 195 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLM--ELPIAMLACARIGAVHSVVFA-GFSAESLAQRIVDCKPKV 195 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEEecCC-CCCHHHHHHHHHhcCceE
Confidence 46899998877666554 457899999999988643 345558888999999886654 788999999999999999
Q ss_pred eecchH
Q 014065 256 YTAVPT 261 (431)
Q Consensus 256 ~~~~p~ 261 (431)
++....
T Consensus 196 li~~~~ 201 (666)
T PLN02654 196 VITCNA 201 (666)
T ss_pred EEEcCc
Confidence 987654
No 152
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=72.12 E-value=54 Score=33.70 Aligned_cols=102 Identities=12% Similarity=0.062 Sum_probs=73.1
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.+++++...++-.. .+....++++..|++.+-... .+.++.+...+++.++++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~--e~~~~~lA~~~~G~v~vpl~~-~~~~~~l~~il~~s~~~~ 181 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRA--EWLIALQGCFRQNITVVTIYA-SLGEEALCHSLNETEVTT 181 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEEecC-CCCHHHHHHHHHccCCCE
Confidence 45788888777666554 458899999988887543 334457788888998885543 678999999999999999
Q ss_pred eecchHHHHHHHhcccCCCCCCCCCccEEEecc
Q 014065 256 YTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCS 288 (431)
Q Consensus 256 ~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g 288 (431)
++.....+..+.+.... +++++.++.-+
T Consensus 182 li~~~~~~~~l~~~~~~-----~~~l~~ii~~~ 209 (696)
T PLN02387 182 VICDSKQLKKLIDISSQ-----LETVKRVIYMD 209 (696)
T ss_pred EEECHHHHHHHHHHhhc-----cCCceEEEEEC
Confidence 99988887776553221 34555555433
No 153
>PRK09274 peptide synthase; Provisional
Probab=71.89 E-value=49 Score=32.74 Aligned_cols=79 Identities=16% Similarity=0.156 Sum_probs=59.3
Q ss_pred eeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+... .++.+++++...++-+. .+...+++++..|+..+..++ ......+...+++.++..
T Consensus 40 ~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~--~~~~~~la~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~ 116 (552)
T PRK09274 40 DELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSL--EFFALTFALFKAGAVPVLVDP-GMGIKNLKQCLAEAQPDA 116 (552)
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcH--HHHHHHHHHHHcCeEEEEcCC-CccHHHHHHHHHhcCCCE
Confidence 367888887766655443 47889999998887543 344558888999999887654 567888888899999988
Q ss_pred eecch
Q 014065 256 YTAVP 260 (431)
Q Consensus 256 ~~~~p 260 (431)
++..+
T Consensus 117 ~i~~~ 121 (552)
T PRK09274 117 FIGIP 121 (552)
T ss_pred EEecc
Confidence 88754
No 154
>PRK07788 acyl-CoA synthetase; Validated
Probab=71.47 E-value=38 Score=33.53 Aligned_cols=84 Identities=13% Similarity=0.171 Sum_probs=64.2
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++...++-. ..+...+++++..|+..+..+. ......+...+++.+++.+
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~--~~~~~~~la~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~i 150 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNH--RGFVLALYAAGKVGARIILLNT-GFSGPQLAEVAAREGVKAL 150 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHhcCCEEEEeCC-CCCHHHHHHHHHhcCCcEE
Confidence 5788888766665544 34788899998887643 3445558889999999987764 5688899999999999999
Q ss_pred ecchHHHHHH
Q 014065 257 TAVPTIHQIV 266 (431)
Q Consensus 257 ~~~p~~~~~l 266 (431)
+..+.....+
T Consensus 151 i~~~~~~~~~ 160 (549)
T PRK07788 151 VYDDEFTDLL 160 (549)
T ss_pred EECchhHHHH
Confidence 9887766654
No 155
>PRK06839 acyl-CoA synthetase; Validated
Probab=71.20 E-value=77 Score=30.68 Aligned_cols=85 Identities=11% Similarity=0.080 Sum_probs=64.8
Q ss_pred eeechHHHHHHHHHHHHH----hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcce
Q 014065 179 VPLTQNNLAASVSNIKSV----YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNAT 254 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t 254 (431)
..+|+..+...+..+... .++.+++++...++-.. .+...+++++..|...+..+. ..++..+...+++.+++
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~--~~~~~~la~~~~G~~~~~~~~-~~~~~~~~~~l~~~~~~ 102 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSL--EYIVLLFAIAKVECIAVPLNI-RLTENELIFQLKDSGTT 102 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHhcCcEEEecCc-ccCHHHHHHHHHhcCce
Confidence 578889888777766544 46888999888887553 344558888999998887664 56888888999999999
Q ss_pred eeecchHHHHHH
Q 014065 255 WYTAVPTIHQIV 266 (431)
Q Consensus 255 ~~~~~p~~~~~l 266 (431)
.++..+.....+
T Consensus 103 ~i~~~~~~~~~~ 114 (496)
T PRK06839 103 VLFVEKTFQNMA 114 (496)
T ss_pred EEEEcHHHHHHH
Confidence 999887766554
No 156
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=71.03 E-value=36 Score=33.93 Aligned_cols=96 Identities=11% Similarity=-0.009 Sum_probs=67.4
Q ss_pred CCcceEEecC-C-------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH--HHHHHHHHHHhCcEEEecCC
Q 014065 18 SSKRALSVSG-K-------FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE--FVIMFLAVIRARATAAPLNA 87 (431)
Q Consensus 18 p~~~a~~~~~-~-------~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~ 87 (431)
++.++++... + ..+|++.+...+.... ...+++++|++....+.... ....+++.+..|+..+....
T Consensus 204 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~ 280 (570)
T PRK04319 204 REDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGK---YVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGG 280 (570)
T ss_pred CCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH---HhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECC
Confidence 4566666432 1 3578887765443333 33578899987776665533 34567888999998888777
Q ss_pred CCCHHHHHHHHhcCCceEEEecCCchhHH
Q 014065 88 AYTPDEFEFYLSDSESKLLLTPAEGNAAA 116 (431)
Q Consensus 88 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 116 (431)
..+.+.+...+++.++.++...+.....+
T Consensus 281 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 309 (570)
T PRK04319 281 RFSPERWYRILEDYKVTVWYTAPTAIRML 309 (570)
T ss_pred CCCHHHHHHHHHHcCCeEEEeCHHHHHHH
Confidence 78889999999999999999877655444
No 157
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=70.66 E-value=64 Score=32.60 Aligned_cols=97 Identities=16% Similarity=0.220 Sum_probs=68.9
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
.++.++++.... .+| ....+|...+...+..+.. ..++.++|++...+|..- .....+++++..|+..+...
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~Gav~v~i~ 144 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIP--EAAIAMLACARIGAIHSVVF 144 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCCEEeccC
Confidence 456666654321 122 2346888888776665544 457899999999988543 33445888899999988665
Q ss_pred CCCCChhhHHHHHHHhcceeeecchH
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPT 261 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~ 261 (431)
+ .+.+..+...+++.+++.++....
T Consensus 145 ~-~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 145 G-GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred C-CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 4 678899999999999999887654
No 158
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=70.07 E-value=65 Score=32.65 Aligned_cols=97 Identities=16% Similarity=0.222 Sum_probs=69.0
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
.++.++++.... . ......+|...+...+..+... .++.++|++...+|-.- .+...+++++..|+..+...
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIP--EAAVAMLACARIGAVHSVVF 154 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEEecC
Confidence 356666654221 1 1134568999988776665544 47889999999887543 33445888899999988765
Q ss_pred CCCCChhhHHHHHHHhcceeeecchH
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPT 261 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~ 261 (431)
+ .+....+...+++.+++.++....
T Consensus 155 ~-~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 155 G-GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred C-CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 4 678899999999999999887543
No 159
>PLN03102 acyl-activating enzyme; Provisional
Probab=68.80 E-value=42 Score=33.57 Aligned_cols=84 Identities=12% Similarity=0.104 Sum_probs=63.8
Q ss_pred eechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+... .++.+++++...+|-.- .+...+++++..|++++..+. .++...+...+++.+++.+
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~~-~~~~~~l~~~l~~~~~~~i 115 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPINT-RLDATSIAAILRHAKPKIL 115 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccc-cCCHHHHHHHHhccCCeEE
Confidence 57888887776665544 47899999999888543 344457888889988876654 6789999999999999999
Q ss_pred ecchHHHHHH
Q 014065 257 TAVPTIHQIV 266 (431)
Q Consensus 257 ~~~p~~~~~l 266 (431)
+..+.....+
T Consensus 116 i~~~~~~~~~ 125 (579)
T PLN03102 116 FVDRSFEPLA 125 (579)
T ss_pred EEChhhHHHH
Confidence 9877655433
No 160
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=68.53 E-value=63 Score=29.00 Aligned_cols=61 Identities=11% Similarity=0.141 Sum_probs=45.2
Q ss_pred HcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecC
Q 014065 49 AAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 49 ~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
+.| ++||++| +=...+---+...+.|...|..++.+=|..-..+.+.+|+..++.+++++.
T Consensus 55 ~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 345 8899943 333334556666777778888777776766667789999999999999997
No 161
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=68.21 E-value=70 Score=26.71 Aligned_cols=91 Identities=12% Similarity=-0.059 Sum_probs=55.9
Q ss_pred CeEEEecCh--hhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchH------HHHHHHhcccCCC
Q 014065 203 DSTVIVLPL--FHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPT------IHQIVLDRHVAKP 274 (431)
Q Consensus 203 ~~~~~~~p~--~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~------~~~~l~~~~~~~~ 274 (431)
.+++..++- .|..|........=..|-.++... ...+++++.+.+++.+++.+.++-+ .++.+.+......
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG-~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~ 163 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLG-RDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEG 163 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECC-CCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcC
Confidence 455555544 788887664444445677776443 2678999999999999988777632 2233333333221
Q ss_pred CCCCCCccEEEeccCCCcHHHHH
Q 014065 275 EPVYPKLRFIRSCSASLAPVILS 297 (431)
Q Consensus 275 ~~~~~~l~~i~~~g~~~~~~~~~ 297 (431)
. .+.+ .+++||.+++++..+
T Consensus 164 ~--~~~v-~i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 164 Y--RDSV-KFMVGGAPVTQDWAD 183 (197)
T ss_pred C--CCCC-EEEEEChhcCHHHHH
Confidence 1 1223 378899999876433
No 162
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=67.83 E-value=41 Score=30.33 Aligned_cols=74 Identities=11% Similarity=0.104 Sum_probs=56.7
Q ss_pred HHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHh
Q 014065 46 RLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASK 122 (431)
Q Consensus 46 ~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~ 122 (431)
.|.+.|++||+.|+|..--+.-++...+|.+. |..++.++... ..-+..++..+++..+...+..+...+..+.
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMKT 246 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHHh
Confidence 45667999999999999999999999999876 66666676553 2346778889999999887666665555543
No 163
>PRK08315 AMP-binding domain protein; Validated
Probab=67.78 E-value=36 Score=33.70 Aligned_cols=81 Identities=15% Similarity=0.060 Sum_probs=60.8
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--cHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPN--TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
..+|++.+...+..+... .+++++|++....|- ...++..+++++..|+..+......+...+...+++.+++++
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 457888887665554433 488999999887776 344556678899999988755666678888899999999999
Q ss_pred EecCCc
Q 014065 107 LTPAEG 112 (431)
Q Consensus 107 i~~~~~ 112 (431)
+..+..
T Consensus 294 ~~~P~~ 299 (559)
T PRK08315 294 YGVPTM 299 (559)
T ss_pred ecchHH
Confidence 876653
No 164
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=67.63 E-value=58 Score=30.52 Aligned_cols=97 Identities=13% Similarity=0.032 Sum_probs=69.7
Q ss_pred CCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHHhCcEEEecCCC
Q 014065 18 SSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE-FVIMFLAVIRARATAAPLNAA 88 (431)
Q Consensus 18 p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~ 88 (431)
++.++++... ...+|++.+...+..+.. ..+++++|++....+.... .+..+++.+..|+..+..++.
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 4566666432 145688888777666655 3467789998888776543 556678888899888877766
Q ss_pred CC--HHHHHHHHhcCCceEEEecCCchhHHH
Q 014065 89 YT--PDEFEFYLSDSESKLLLTPAEGNAAAQ 117 (431)
Q Consensus 89 ~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~ 117 (431)
.. .+.+..+++..+++.++..+.....+.
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~ 226 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLA 226 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHH
Confidence 55 678999999999999998877554443
No 165
>PRK05857 acyl-CoA synthetase; Validated
Probab=67.51 E-value=54 Score=32.37 Aligned_cols=81 Identities=10% Similarity=0.067 Sum_probs=61.3
Q ss_pred eeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+... .++.+++++...++-... ++..+++++..|+..+..+. .++...+...++..++..
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e--~~~~~lA~~~~G~v~v~l~~-~~~~~~l~~~~~~~~~~~ 116 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPE--TYLSVLACAKLGAIAVMADG-NLPIAAIERFCQITDPAA 116 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHH--HHHHHHHHHHcCeEEEecCc-cCCHHHHHHHHHhcCCce
Confidence 358888887776665543 478899999888875443 34448888999999987663 678889999999988888
Q ss_pred eecchHH
Q 014065 256 YTAVPTI 262 (431)
Q Consensus 256 ~~~~p~~ 262 (431)
++..+..
T Consensus 117 ii~~~~~ 123 (540)
T PRK05857 117 ALVAPGS 123 (540)
T ss_pred EEEeccc
Confidence 8877654
No 166
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=67.09 E-value=43 Score=33.13 Aligned_cols=84 Identities=10% Similarity=0.016 Sum_probs=64.8
Q ss_pred eechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecc
Q 014065 180 PLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAV 259 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 259 (431)
.+|...+...+..+...+.-.+++++...+|-... +...+++++..|+..+..+. .....++...++..+++.++..
T Consensus 45 ~~Ty~el~~~~~~lA~~L~~~~gd~Val~~~n~~e--~~~~~lA~~~~G~v~vpl~~-~~~~~~l~~~l~~~~~~~ii~~ 121 (539)
T PRK06334 45 KLSYNQVRKAVIALATKVSKYPDQHIGIMMPASAG--AYIAYFATLLSGKIPVMINW-SQGLREVTACANLVGVTHVLTS 121 (539)
T ss_pred cccHHHHHHHHHHHHHHHhhccCCeEEEEcCCchH--HHHHHHHHHhcCCeeEecCc-ccchHHHHHHHHHcCCCEEEeh
Confidence 47999998888887777766688999888885443 34447888999998886653 5678889999999999998887
Q ss_pred hHHHHHH
Q 014065 260 PTIHQIV 266 (431)
Q Consensus 260 p~~~~~l 266 (431)
...+..+
T Consensus 122 ~~~~~~~ 128 (539)
T PRK06334 122 KQLMQHL 128 (539)
T ss_pred HHHHHHH
Confidence 7665544
No 167
>PRK08316 acyl-CoA synthetase; Validated
Probab=66.66 E-value=82 Score=30.75 Aligned_cols=86 Identities=14% Similarity=0.035 Sum_probs=63.6
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.+++++....+-... +...+++++..|...+..+. .+....+...+++.++..
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~--~~~~~~a~~~~G~~~v~l~~-~~~~~~i~~~l~~~~~~~ 111 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA--YALLWLACARAGAVHVPVNF-MLTGEELAYILDHSGARA 111 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEeccc-ccCHHHHHHHHHhCCCCE
Confidence 46788887766655443 3478889998888775443 34447888999988887654 568888999999999999
Q ss_pred eecchHHHHHHH
Q 014065 256 YTAVPTIHQIVL 267 (431)
Q Consensus 256 ~~~~p~~~~~l~ 267 (431)
++..+.....+.
T Consensus 112 ii~~~~~~~~~~ 123 (523)
T PRK08316 112 FLVDPALAPTAE 123 (523)
T ss_pred EEEccchHHHHH
Confidence 988877766554
No 168
>PRK13388 acyl-CoA synthetase; Provisional
Probab=65.73 E-value=90 Score=30.82 Aligned_cols=84 Identities=10% Similarity=0.001 Sum_probs=62.3
Q ss_pred eechHHHHHHHHHHHHH---hcC-CCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 180 PLTQNNLAASVSNIKSV---YKL-TESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~-~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
.+|...+...+..+... .++ .+++++...++-... +...+++++..|+..+..++ .+....+...+++.+++.
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~--~v~~~lA~~~~Ga~~v~l~p-~~~~~~l~~~l~~~~~~~ 102 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPE--MLFWLAAAALGGYVLVGLNT-TRRGAALAADIRRADCQL 102 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcH--HHHHHHHHHhCCCEEEEecc-cCChHHHHHHHHhcCCCE
Confidence 67888887776665544 467 688888888875433 34458888999999986654 567889999999999999
Q ss_pred eecchHHHHHH
Q 014065 256 YTAVPTIHQIV 266 (431)
Q Consensus 256 ~~~~p~~~~~l 266 (431)
++........+
T Consensus 103 ~i~~~~~~~~~ 113 (540)
T PRK13388 103 LVTDAEHRPLL 113 (540)
T ss_pred EEEChhhhHHH
Confidence 88876655443
No 169
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=65.71 E-value=92 Score=31.75 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=60.8
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..++. ..++.++|++...+|..-. ....+++++..|+..+...+ .+..+.+...+++.++..
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e--~~~~~lA~~~~Gav~vp~~~-~~~~~~l~~~l~~~~~k~ 189 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQ--AVVAMLATASVGAIWSSCSP-DFGARGVLDRFQQIEPKL 189 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHhCeEEEecCC-CCCHHHHHHHHHhcCCcE
Confidence 46888888777666554 4488999999999986543 34447888899988876654 678899999999999988
Q ss_pred eecch
Q 014065 256 YTAVP 260 (431)
Q Consensus 256 ~~~~p 260 (431)
++...
T Consensus 190 li~~~ 194 (652)
T TIGR01217 190 LFTVD 194 (652)
T ss_pred EEEcc
Confidence 88754
No 170
>PRK12583 acyl-CoA synthetase; Provisional
Probab=65.57 E-value=44 Score=33.02 Aligned_cols=81 Identities=17% Similarity=0.125 Sum_probs=60.3
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--cHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPN--TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
..+|++.+...+..+...+ +++++|++....|- ....+...++++..|+..+......+...+...+++.++..+
T Consensus 219 v~~s~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAESL---GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHHh---CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 4678888876665554443 78899998887764 345666778888899888754555677888889999999999
Q ss_pred EecCCc
Q 014065 107 LTPAEG 112 (431)
Q Consensus 107 i~~~~~ 112 (431)
+..+..
T Consensus 296 ~~~P~~ 301 (558)
T PRK12583 296 YGVPTM 301 (558)
T ss_pred eccHHH
Confidence 876653
No 171
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=65.48 E-value=48 Score=32.33 Aligned_cols=84 Identities=13% Similarity=-0.001 Sum_probs=63.5
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE-FVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLL 107 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 107 (431)
..+|+..+...+......+ +++++|++...+|.+.. .+..+++++..|+..+..+ ....+.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHcCCceEe
Confidence 4578888877666655443 67899999988887543 3456788899999988664 46788899999999999999
Q ss_pred ecCCchhHH
Q 014065 108 TPAEGNAAA 116 (431)
Q Consensus 108 ~~~~~~~~~ 116 (431)
..+.....+
T Consensus 255 ~~P~~~~~l 263 (515)
T TIGR03098 255 AVPPLWAQL 263 (515)
T ss_pred cChHHHHHH
Confidence 888655443
No 172
>PRK07798 acyl-CoA synthetase; Validated
Probab=64.82 E-value=1e+02 Score=30.15 Aligned_cols=86 Identities=15% Similarity=0.048 Sum_probs=61.9
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
-.+|...+...+..+.. ..++.+++++...++-.- .+...+++.+..|+..+..+. ......+...+++.+++.
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~--~~~~~~~a~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~ 103 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI--EYVEAMLGAFKARAVPVNVNY-RYVEDELRYLLDDSDAVA 103 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCeEEEecCc-CCCHHHHHHHHhhcCCCE
Confidence 35788887666555443 457888998888876433 344557888889998887654 568888999999999999
Q ss_pred eecchHHHHHHH
Q 014065 256 YTAVPTIHQIVL 267 (431)
Q Consensus 256 ~~~~p~~~~~l~ 267 (431)
++..+.....+.
T Consensus 104 ~~~~~~~~~~~~ 115 (533)
T PRK07798 104 LVYEREFAPRVA 115 (533)
T ss_pred EEEchhhHHHHH
Confidence 888776555443
No 173
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=64.80 E-value=1e+02 Score=31.35 Aligned_cols=95 Identities=14% Similarity=0.158 Sum_probs=67.3
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
++.++++.... .| ....+|...|...+..+.. ..++.++|++...+|..- .....+++++..|+..+...+
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~v~~~lA~~~~Gav~v~l~~ 171 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIP--ETVVAMLATASLGAIWSSCSP 171 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCcEEEeeCC
Confidence 45666554322 22 1346888888776665544 447899999999988543 334458889999999887654
Q ss_pred CCCChhhHHHHHHHhcceeeecchH
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVPT 261 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p~ 261 (431)
.+....+...+++.++..++....
T Consensus 172 -~~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 172 -DFGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred -CCCHHHHHHHHHHcCCcEEEEccc
Confidence 678889999999999988887653
No 174
>PLN03051 acyl-activating enzyme; Provisional
Probab=64.64 E-value=40 Score=32.91 Aligned_cols=96 Identities=15% Similarity=-0.031 Sum_probs=64.2
Q ss_pred CCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHHhCcEEEecCCC
Q 014065 18 SSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE-FVIMFLAVIRARATAAPLNAA 88 (431)
Q Consensus 18 p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~ 88 (431)
++.++++... +..+|++.+...+.... ...++.++|++...+|-+.. .+..+++++..|++.+..+..
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~ 194 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGW---AHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGA 194 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHHH---HhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCC
Confidence 3566666432 24567777655433322 33478899988776665322 234567888999998877655
Q ss_pred CCHHHHHHHHhcCCceEEEecCCchhHH
Q 014065 89 YTPDEFEFYLSDSESKLLLTPAEGNAAA 116 (431)
Q Consensus 89 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 116 (431)
...+.+...+++.++.++...+.....+
T Consensus 195 ~~~~~~~~~i~~~~vt~~~~vP~~~~~l 222 (499)
T PLN03051 195 PLGRGFGKFVQDAGVTVLGLVPSIVKAW 222 (499)
T ss_pred CCcHHHHHHHHHhCCcEEEeCHHHHHHH
Confidence 5667889999999999999877655443
No 175
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=64.44 E-value=69 Score=32.43 Aligned_cols=95 Identities=16% Similarity=0.200 Sum_probs=67.0
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHH---HHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIK---SVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
++.++++. -+..+|. .-.+|...|...+..+. ...++.++|++...+|..- .....+++++..|+..+...+
T Consensus 66 p~~~Al~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~--e~v~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 66 GEQLALVT-VSSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIA--EAVFAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHhCCEEEecCC
Confidence 45566543 2222222 23578888876666544 4458999999999998643 344558889999999876654
Q ss_pred CCCChhhHHHHHHHhcceeeecch
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVP 260 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p 260 (431)
.+....+...+++.+++.++...
T Consensus 141 -~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 -GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred -CCCHHHHHHHHHhcCceEEEECC
Confidence 67889999999999999888754
No 176
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=64.42 E-value=85 Score=28.55 Aligned_cols=64 Identities=11% Similarity=-0.020 Sum_probs=48.0
Q ss_pred HHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 47 LVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 47 L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
+.+.|..+++.|.... .+-.-..+.++|.+.|..++.+-|..........++..++++++++..
T Consensus 43 a~~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 43 SAKQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred HHHhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3334444566665554 456667778889999998888877777777889999999999998765
No 177
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=64.32 E-value=90 Score=32.44 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=72.4
Q ss_pred eeechHHHHHHHHHHHHH------hcCCCC-----------CeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCCh
Q 014065 179 VPLTQNNLAASVSNIKSV------YKLTES-----------DSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSA 241 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~------~~~~~~-----------~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~ 241 (431)
..+|...+...+..+... .|+.++ +++...++-. ..+....++++..|++.+-... .+.+
T Consensus 90 ~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~--~ew~~~~lA~~~~Gav~Vpl~~-~~~~ 166 (746)
T PTZ00342 90 NYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNS--INWLVADLACMLSGVTTLVMHS-KFSI 166 (746)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCC--HHHHHHHHHHHHcCCeEEEecC-CCCH
Confidence 357888887666654433 367776 7787777643 2445557888889998886554 7899
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEecc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCS 288 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g 288 (431)
+.+...+++-++++++..+..+..+.+... .++.++.++.-+
T Consensus 167 ~el~~il~~s~~~~lv~~~~~~~~l~~~~~-----~~~~l~~ii~~~ 208 (746)
T PTZ00342 167 DVIVDILNETKLEWLCLDLDLVEGLLERKN-----ELPHLKKLIILD 208 (746)
T ss_pred HHHHHHHhcCCCCEEEEcHHHHHHHHHhhc-----cCCCceEEEEEC
Confidence 999999999999999998888777765432 145677666543
No 178
>PLN02246 4-coumarate--CoA ligase
Probab=64.27 E-value=67 Score=31.66 Aligned_cols=85 Identities=11% Similarity=0.128 Sum_probs=62.4
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
-.+|+..+...+..+.. ..++.+++++....+-. ..+...+++++..|.+.+..+. ......+...++..++..
T Consensus 49 ~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~--~~~~~~~la~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~ 125 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNC--PEFVLAFLGASRRGAVTTTANP-FYTPAEIAKQAKASGAKL 125 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC--hHHHHHHHHHHHcCEEEecCCC-CCCHHHHHHHHHhcCCcE
Confidence 35888888766655444 35788999998887754 2444557888888988886654 567888999999999998
Q ss_pred eecchHHHHHH
Q 014065 256 YTAVPTIHQIV 266 (431)
Q Consensus 256 ~~~~p~~~~~l 266 (431)
++........+
T Consensus 126 li~~~~~~~~~ 136 (537)
T PLN02246 126 IITQSCYVDKL 136 (537)
T ss_pred EEEccchHHHH
Confidence 88776555443
No 179
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=64.17 E-value=1.1e+02 Score=29.84 Aligned_cols=84 Identities=10% Similarity=0.024 Sum_probs=62.9
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+......+.. ..++.+++++....+-+... ...+++++..|...+..+. .+.+..+...+++.+++.+
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~--~~~~la~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~l 113 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF--IFCWFGLAKIGAIMVPINA-RLLREESAWILQNSQASLL 113 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEEcCc-ccCHHHHHHHHHhcCceEE
Confidence 4677887766665544 45888999999888765433 3447888999998886654 6788999999999999999
Q ss_pred ecchHHHHHH
Q 014065 257 TAVPTIHQIV 266 (431)
Q Consensus 257 ~~~p~~~~~l 266 (431)
+..+.....+
T Consensus 114 ~~~~~~~~~~ 123 (517)
T PRK08008 114 VTSAQFYPMY 123 (517)
T ss_pred EEecchhHHH
Confidence 8887655443
No 180
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=64.03 E-value=60 Score=32.33 Aligned_cols=84 Identities=17% Similarity=0.159 Sum_probs=64.0
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.++|++...+|-... +...+++++..|+..+..++ .+....+...+++.+++.+
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~i 133 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ--HIVAFYAVLRLGAVVVEHNP-LYTAHELEHPFEDHGARVA 133 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecCc-CCCHHHHHHHHhccCCcEE
Confidence 4788888766665544 4478899999988876443 34558888899999886654 6789999999999999999
Q ss_pred ecchHHHHHH
Q 014065 257 TAVPTIHQIV 266 (431)
Q Consensus 257 ~~~p~~~~~l 266 (431)
+........+
T Consensus 134 i~~~~~~~~~ 143 (573)
T PRK05605 134 IVWDKVAPTV 143 (573)
T ss_pred EechhhHHHH
Confidence 9877765544
No 181
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=63.89 E-value=85 Score=29.39 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=38.2
Q ss_pred HHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHhcCCceEEEec
Q 014065 46 RLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-----YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 46 ~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 109 (431)
.+...++++||.|++-.+. +.....++...|+.++.++.+ .+.+.+...+.. +.++|+..
T Consensus 62 ~l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 62 AALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 3444578899988875543 344455667889887777533 355667777654 56666644
No 182
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=63.73 E-value=67 Score=28.86 Aligned_cols=66 Identities=12% Similarity=0.075 Sum_probs=47.6
Q ss_pred HHHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 46 RLVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 46 ~L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
...+.| +.+|++| +....+-.-..+.+++.+.|..+..+-|....+.....++..++++++++...
T Consensus 47 ~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 47 DAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 344455 4777776 44444556666677888899988777776655666888999999999998753
No 183
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=63.49 E-value=58 Score=30.40 Aligned_cols=62 Identities=13% Similarity=0.054 Sum_probs=48.5
Q ss_pred HcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecC
Q 014065 49 AAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 49 ~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
+.| ++||....+....+-.-+.+.++|...|..+..+-|..........++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 67885444446667777788888899999888887777777778999999999999975
No 184
>PRK07514 malonyl-CoA synthase; Validated
Probab=63.38 E-value=78 Score=30.76 Aligned_cols=85 Identities=13% Similarity=0.110 Sum_probs=63.7
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.+++++....+-.. .+...+++++..|+..+..++ ......+...+++.+++.
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~-~~~~~~~~~~l~~~~~~~ 103 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNT-AYTLAELDYFIGDAEPAL 103 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCC-CCCHHHHHHHHHhCCCcE
Confidence 46888888766655544 447889999988887543 445558888999998886654 568888999999999999
Q ss_pred eecchHHHHHH
Q 014065 256 YTAVPTIHQIV 266 (431)
Q Consensus 256 ~~~~p~~~~~l 266 (431)
+...+.....+
T Consensus 104 ii~~~~~~~~~ 114 (504)
T PRK07514 104 VVCDPANFAWL 114 (504)
T ss_pred EEEccchhHHH
Confidence 98887766543
No 185
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=63.11 E-value=1e+02 Score=30.42 Aligned_cols=95 Identities=15% Similarity=0.073 Sum_probs=65.7
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
++.++++.... +.++...+|...+...+..+.. ..++.+++++...++-... ....+++++..|+..+..+.
T Consensus 38 p~~~A~~~~~~---~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e--~~~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 38 PDKTAVTAVRL---GTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWE--FTVLYLACSRIGAVLNPLMP 112 (547)
T ss_pred CCceEEEecCC---CccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChH--HHHHHHHHHhcCcEEecccc
Confidence 45555544222 2233356888888776665544 3478899999988875443 34448888999999876553
Q ss_pred CCCChhhHHHHHHHhcceeeecch
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVP 260 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p 260 (431)
....+.+...++..+++.+....
T Consensus 113 -~~~~~~l~~~l~~~~~~~li~~~ 135 (547)
T PRK13295 113 -IFRERELSFMLKHAESKVLVVPK 135 (547)
T ss_pred -ccCHHHHHHHHHhcCceEEEEec
Confidence 56788888999999988887654
No 186
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=63.07 E-value=72 Score=31.54 Aligned_cols=85 Identities=9% Similarity=-0.013 Sum_probs=65.0
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++....|-.... ...+++++..|+..+..+. .....++...+++.+++.+
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~-~~~~~~l~~~l~~~~~~~l 122 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINT-ALRGPQLEHILRNSGARLL 122 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEecc-ccCHHHHHHHHHhcCceEE
Confidence 5788888777666554 34788899988887754433 4458888999999986654 6788999999999999999
Q ss_pred ecchHHHHHHH
Q 014065 257 TAVPTIHQIVL 267 (431)
Q Consensus 257 ~~~p~~~~~l~ 267 (431)
+..+.....+.
T Consensus 123 ~~~~~~~~~~~ 133 (542)
T PRK06155 123 VVEAALLAALE 133 (542)
T ss_pred EEChhhHHHHH
Confidence 98887766553
No 187
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=62.88 E-value=57 Score=30.40 Aligned_cols=82 Identities=22% Similarity=0.223 Sum_probs=58.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHhcCCceEEEecC----
Q 014065 40 VERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-----YTPDEFEFYLSDSESKLLLTPA---- 110 (431)
Q Consensus 40 ~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~~---- 110 (431)
+..+.-.|+..++++||-|.+ ++..|+++.=++...|+.+|.++-+ ++.+.++..|... .++||.-+
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~ 134 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQ 134 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccC
Confidence 455566677778999995543 4667889999999999999998643 4678899888876 66666543
Q ss_pred -CchhHHHHHHHhcCc
Q 014065 111 -EGNAAAQAAASKLNI 125 (431)
Q Consensus 111 -~~~~~~~~~~~~~~~ 125 (431)
...+.+.++.++.++
T Consensus 135 ~~dm~~i~~la~~~~l 150 (374)
T COG0399 135 PCDMDAIMALAKRHGL 150 (374)
T ss_pred CCCHHHHHHHHHHcCC
Confidence 245556666655443
No 188
>PRK13383 acyl-CoA synthetase; Provisional
Probab=62.65 E-value=68 Score=31.40 Aligned_cols=84 Identities=10% Similarity=0.087 Sum_probs=62.8
Q ss_pred eechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+... .++.+++++...++-.- .+...+++++..|+..+..+. .+..+.+...+++.+++.+
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~--~~~~~~la~~~~G~v~vpl~~-~~~~~~l~~~l~~~~~~~i 136 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR--GFVTAVFAVGLLGADVVPIST-EFRSDALAAALRAHHISTV 136 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCeEEEEcCc-cCCHHHHHHHHhcCCCCEE
Confidence 47878877666655443 47888999888887433 334447788889999987654 6788999999999999999
Q ss_pred ecchHHHHHH
Q 014065 257 TAVPTIHQIV 266 (431)
Q Consensus 257 ~~~p~~~~~l 266 (431)
+..+...+.+
T Consensus 137 i~~~~~~~~~ 146 (516)
T PRK13383 137 VADNEFAERI 146 (516)
T ss_pred EEchhHHHHH
Confidence 9887766554
No 189
>PRK07529 AMP-binding domain protein; Validated
Probab=62.57 E-value=90 Score=31.63 Aligned_cols=96 Identities=17% Similarity=0.126 Sum_probs=63.7
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
.++.++++....+.. ..+...+|...+...+..+.. ..++.+++++...+|-... +...+++++..|..+.+.+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e--~~~~~lA~~~~Gi~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPE--THFALWGGEAAGIANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCEEEeCCC
Confidence 345666655432211 123457888888766665443 4578899999999885443 3444777777784332322
Q ss_pred CCCCChhhHHHHHHHhcceeeecc
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAV 259 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~ 259 (431)
..+++.+...+++.+++.++..
T Consensus 115 --~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 115 --LLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred --cCCHHHHHHHHHhcCCcEEEEe
Confidence 6788999999999999998875
No 190
>PLN02614 long-chain acyl-CoA synthetase
Probab=62.46 E-value=1.6e+02 Score=30.19 Aligned_cols=85 Identities=8% Similarity=-0.106 Sum_probs=64.0
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.++|++...++-.. .+....++++..|+..+-... .+.+.++...+++.+++.
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~--e~~~~~lA~~~~Gav~vpl~~-~~~~~~l~~il~~~~~~~ 154 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSP--EWIISMEACNAHGLYCVPLYD-TLGAGAVEFIISHSEVSI 154 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEEEecC-CCCHHHHHHHHhccCCCE
Confidence 34688888776665544 457899999988888543 345557888899998876553 678899999999999999
Q ss_pred eecchHHHHHH
Q 014065 256 YTAVPTIHQIV 266 (431)
Q Consensus 256 ~~~~p~~~~~l 266 (431)
++.....+..+
T Consensus 155 vi~~~~~~~~~ 165 (666)
T PLN02614 155 VFVEEKKISEL 165 (666)
T ss_pred EEECHHHHHHH
Confidence 99877665544
No 191
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=62.43 E-value=31 Score=32.74 Aligned_cols=79 Identities=10% Similarity=0.055 Sum_probs=59.3
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH-HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTV-EFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLL 107 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 107 (431)
..+|++.+...+......+ +++++|++....+... ..+..+++++..|+..+..++. +.+...+++.++..+.
T Consensus 129 v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 4678999888777666544 7899999988877642 2334568889999988877543 3788889999999998
Q ss_pred ecCCch
Q 014065 108 TPAEGN 113 (431)
Q Consensus 108 ~~~~~~ 113 (431)
..+...
T Consensus 203 ~~P~~l 208 (436)
T TIGR01923 203 LVPTQL 208 (436)
T ss_pred eHHHHH
Confidence 876544
No 192
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=61.98 E-value=56 Score=31.31 Aligned_cols=82 Identities=15% Similarity=0.129 Sum_probs=64.4
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--cHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPN--TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
-++|.-++.+.+...+..+ |+...+++++-.|- ..-.++..+|++..|++.+.-.|...+...-+.+.+.++..+
T Consensus 252 atLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l 328 (596)
T KOG1177|consen 252 ATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTL 328 (596)
T ss_pred eeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEE
Confidence 6899999999888887765 66664444443332 344577889999999999998999999999999999999999
Q ss_pred EecCCch
Q 014065 107 LTPAEGN 113 (431)
Q Consensus 107 i~~~~~~ 113 (431)
+..+.-.
T Consensus 329 ~gtPtM~ 335 (596)
T KOG1177|consen 329 YGTPTMF 335 (596)
T ss_pred ecChHHH
Confidence 9877633
No 193
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=61.23 E-value=29 Score=27.02 Aligned_cols=41 Identities=17% Similarity=0.050 Sum_probs=33.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCC---cHHHHHHHHHHHHhCcE
Q 014065 41 ERAASRLVAAGINAGDVVALTFPN---TVEFVIMFLAVIRARAT 81 (431)
Q Consensus 41 ~~~a~~L~~~gl~~gd~V~i~~~n---~~~~~~~~lA~~~~G~~ 81 (431)
+.+++.|.+.|+.+++.|.+++.. +.....+++++..+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 478888999999999999999975 56677777888888865
No 194
>PLN03013 cysteine synthase
Probab=61.23 E-value=71 Score=30.45 Aligned_cols=80 Identities=13% Similarity=0.004 Sum_probs=55.5
Q ss_pred cccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 30 DLTYSRIHELVERAASRLVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+=|+++ +-+..+.....+.| +++|....+....+-.-+.+.++|...|..++.+=|.....+....++..+++++++
T Consensus 150 tGSfKd--R~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v 227 (429)
T PLN03013 150 CCSVKD--RIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLT 227 (429)
T ss_pred ccccHH--HHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEE
Confidence 345555 22233333344455 578865556666666777778888889988777777767778889999999999999
Q ss_pred cCC
Q 014065 109 PAE 111 (431)
Q Consensus 109 ~~~ 111 (431)
++.
T Consensus 228 ~~~ 230 (429)
T PLN03013 228 DPA 230 (429)
T ss_pred CCC
Confidence 865
No 195
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=60.00 E-value=85 Score=30.95 Aligned_cols=85 Identities=8% Similarity=0.031 Sum_probs=63.5
Q ss_pred eechHHHHHHHHHHHH---Hh-cCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 180 PLTQNNLAASVSNIKS---VY-KLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
.+|...+...+..+.. .. ++.+++++...++-.- .+...+++++..|+..+..+. ......+...+++.+++.
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~ 111 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP--QFVIAYYAILRANAVVVPVNP-MNREEELAHYVTDSGARV 111 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCcEEeecCc-CcCHHHHHHHHHhCCCeE
Confidence 4788888766555443 33 8889999988887443 445558888999999887654 568889999999999999
Q ss_pred eecchHHHHHHH
Q 014065 256 YTAVPTIHQIVL 267 (431)
Q Consensus 256 ~~~~p~~~~~l~ 267 (431)
++..+.....+.
T Consensus 112 ii~~~~~~~~~~ 123 (546)
T PRK08314 112 AIVGSELAPKVA 123 (546)
T ss_pred EEEccchhhhHH
Confidence 988877655543
No 196
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=59.80 E-value=1.1e+02 Score=28.51 Aligned_cols=58 Identities=14% Similarity=0.098 Sum_probs=38.2
Q ss_pred HHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHhcCCceEEEec
Q 014065 48 VAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-----YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 48 ~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 109 (431)
...++++||.|.+-.+..+ ....++...|+.++.++.+ .+.+.+...+.. +.++|+..
T Consensus 64 ~~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 64 LLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 3346789998877665443 3445667788887777532 457778887755 56666644
No 197
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=59.44 E-value=1.3e+02 Score=26.89 Aligned_cols=64 Identities=16% Similarity=0.104 Sum_probs=47.5
Q ss_pred HHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 47 LVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 47 L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
..+.| +.+|+.|+. ...+-.-..+.++|.+.|..+..+-|..........++..++++++++..
T Consensus 50 a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~ 114 (290)
T TIGR01138 50 AEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTKE 114 (290)
T ss_pred HHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 33444 477776655 45566667777888889998887777766677778899999999998763
No 198
>PLN00011 cysteine synthase
Probab=59.40 E-value=88 Score=28.55 Aligned_cols=65 Identities=11% Similarity=-0.027 Sum_probs=49.0
Q ss_pred HHHHcC-CCCC-CEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 46 RLVAAG-INAG-DVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 46 ~L~~~g-l~~g-d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
...+.| +.|| +.|. ....+-.-..+.++|...|..+..+=|..........++..++++++++..
T Consensus 58 ~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 58 DAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 344444 6787 5554 356667777788889999998877777666678888999999999999864
No 199
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=59.07 E-value=94 Score=31.74 Aligned_cols=86 Identities=12% Similarity=-0.034 Sum_probs=64.7
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.++|++...++-.. .+....++++..|+..+-... .+....+...+++.+++.
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~--e~~~~~lA~~~~G~v~vpl~~-~~~~~~l~~il~~s~~~~ 152 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQGITYVPLYD-TLGANAVEFIINHAEVSI 152 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEEecC-CCCHHHHHHHHHcCCCCE
Confidence 45788888777666554 347899999988888543 334457888999998886553 678889999999999999
Q ss_pred eecchHHHHHHH
Q 014065 256 YTAVPTIHQIVL 267 (431)
Q Consensus 256 ~~~~p~~~~~l~ 267 (431)
++.....+..+.
T Consensus 153 v~~~~~~~~~~~ 164 (660)
T PLN02861 153 AFVQESKISSIL 164 (660)
T ss_pred EEECHHHHHHHH
Confidence 998776655543
No 200
>PRK08162 acyl-CoA synthetase; Validated
Probab=58.72 E-value=84 Score=30.99 Aligned_cols=84 Identities=15% Similarity=0.146 Sum_probs=64.5
Q ss_pred eechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+... .++.+++++...++-.. .+...+++.+..|+..+..+. ......+...+++.+++.+
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~--~~~~~~lA~~~~G~~~vpl~~-~~~~~~~~~~l~~~~~~~i 119 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIP--AMVEAHFGVPMAGAVLNTLNT-RLDAASIAFMLRHGEAKVL 119 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCch--HHHHHHHHHHHhCcEEecccc-ccChHHHHHHHHhCCCeEE
Confidence 58888887776665544 47889999988887654 344557888888988876654 6788999999999999999
Q ss_pred ecchHHHHHH
Q 014065 257 TAVPTIHQIV 266 (431)
Q Consensus 257 ~~~p~~~~~l 266 (431)
+..+.....+
T Consensus 120 ~~~~~~~~~~ 129 (545)
T PRK08162 120 IVDTEFAEVA 129 (545)
T ss_pred EEccchhhHH
Confidence 9888766554
No 201
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=58.52 E-value=1.4e+02 Score=26.85 Aligned_cols=79 Identities=14% Similarity=0.075 Sum_probs=52.7
Q ss_pred cccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 30 DLTYSRIHELVERAASRLVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+-||+. +.....+ ..+++.| +.+|+.|+ ....+-.-..+.++|.+.|..+..+-|..........++..+++++++
T Consensus 34 tGS~K~-R~a~~~~-~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~ 110 (299)
T TIGR01136 34 SGSVKD-RIALSMI-EDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILT 110 (299)
T ss_pred CCCccH-HHHHHHH-HHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEe
Confidence 345554 2223333 3344445 46777664 455566666777788889998877777666666778899999999998
Q ss_pred cCC
Q 014065 109 PAE 111 (431)
Q Consensus 109 ~~~ 111 (431)
+..
T Consensus 111 ~~~ 113 (299)
T TIGR01136 111 PAE 113 (299)
T ss_pred CCC
Confidence 865
No 202
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=58.51 E-value=84 Score=31.13 Aligned_cols=83 Identities=12% Similarity=0.182 Sum_probs=61.8
Q ss_pred eechHHHHHHHHHHHH----HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 180 PLTQNNLAASVSNIKS----VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
.+|...+......+.. ..++.+++++...+|-.. .+...+++++..|+..+..++ .+...++...+++.+++.
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~p-~~~~~~~~~~l~~~~~~~ 126 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCL--QYPIATFGVLRAGLTVVNVNP-LYTPRELKHQLIDSGASV 126 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH--HHHHHHHHHHHhCeEEeccCc-cCCHHHHHHHHHhcCCeE
Confidence 5788888766665554 357889999988877543 334557888899999986554 567888999999999999
Q ss_pred eecchHHHHH
Q 014065 256 YTAVPTIHQI 265 (431)
Q Consensus 256 ~~~~p~~~~~ 265 (431)
++........
T Consensus 127 vi~~~~~~~~ 136 (560)
T PRK08751 127 LVVIDNFGTT 136 (560)
T ss_pred EEEcchhHHH
Confidence 8887655443
No 203
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=58.02 E-value=1e+02 Score=30.33 Aligned_cols=96 Identities=15% Similarity=0.126 Sum_probs=68.7
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh----cCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCC
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVY----KLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRF 239 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~ 239 (431)
..+++-+-.++. -.+|...|......+...+ +. ++|++...+|..-- ....++++...|+......+ .|
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe--~~~a~LA~~riGAI~~~vf~-~f 99 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPE--AVIALLATARIGAIPAVVSP-GL 99 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHH--HHHHHHHHHHcCCEEeeccc-CC
Confidence 344554444333 5788888877666555443 46 89999999997543 34457888888887765543 78
Q ss_pred ChhhHHHHHHHhcceeeecchHHHHHH
Q 014065 240 SASTFWQDMIKYNATWYTAVPTIHQIV 266 (431)
Q Consensus 240 ~~~~~~~~i~~~~~t~~~~~p~~~~~l 266 (431)
.+..+...+.+.++.+++.....++..
T Consensus 100 ~~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 100 SAEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred CHHHHHHHHHccCCCEEEEeccccccc
Confidence 899999999999999998777666653
No 204
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=57.99 E-value=62 Score=31.23 Aligned_cols=84 Identities=8% Similarity=0.034 Sum_probs=60.6
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE-FVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLL 107 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 107 (431)
..+|++.+...+.... ...+++++|++...+|-... .+..+++.+..|+..+..+ ..+...+...+++.++.++.
T Consensus 159 v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 234 (483)
T PRK03640 159 VIQTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIIS 234 (483)
T ss_pred EEEecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEE
Confidence 3578887765443332 23588999999998876332 3444677788899887665 56788899999999999999
Q ss_pred ecCCchhHH
Q 014065 108 TPAEGNAAA 116 (431)
Q Consensus 108 ~~~~~~~~~ 116 (431)
..+.....+
T Consensus 235 ~~P~~~~~l 243 (483)
T PRK03640 235 VVSTMLQRL 243 (483)
T ss_pred eHHHHHHHH
Confidence 887655443
No 205
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=57.62 E-value=1.3e+02 Score=29.78 Aligned_cols=84 Identities=15% Similarity=0.054 Sum_probs=60.7
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.+++++...++-... +...+++++..|+..+..+. ......+...+++.++..
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~vpl~~-~~~~~~l~~~l~~~~~~~ 130 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAE--YGIVALGIMAAGGVFSGANP-TALESEIKKQAEAAGAKL 130 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchH--HHHHHHHHHHhCcEeccCCc-cCCHHHHHHHHHhcCCeE
Confidence 35788888766665544 4478889999888775443 34447888999998876543 557888999999999988
Q ss_pred eecchHHHHH
Q 014065 256 YTAVPTIHQI 265 (431)
Q Consensus 256 ~~~~p~~~~~ 265 (431)
+...+..+..
T Consensus 131 ~i~~~~~~~~ 140 (546)
T PLN02330 131 IVTNDTNYGK 140 (546)
T ss_pred EEEccchhhh
Confidence 8776655443
No 206
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=57.01 E-value=34 Score=33.06 Aligned_cols=60 Identities=15% Similarity=0.145 Sum_probs=44.2
Q ss_pred cCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC--CCCCChhhHHHHHHHhcceeeecchHH
Q 014065 198 KLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA--AGRFSASTFWQDMIKYNATWYTAVPTI 262 (431)
Q Consensus 198 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~~~i~~~~~t~~~~~p~~ 262 (431)
-.+++|.+++--|.|+..-. ..-..|..++-.+ ....+++.+-+.+++++|..++++|++
T Consensus 175 l~~pGd~v~vE~PtY~~~~~-----~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 175 LLDPGDTVLVEDPTYPGALQ-----ALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred hCCCCCEEEEcCCCcHHHHH-----HHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 34589999999998876422 2234566665432 445699999999999999999999986
No 207
>PRK07470 acyl-CoA synthetase; Validated
Probab=56.75 E-value=1.1e+02 Score=30.14 Aligned_cols=83 Identities=12% Similarity=0.081 Sum_probs=61.2
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++....+-.. .++..+++++..|...+..+. .+....+...+++.+++.+
T Consensus 32 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~-~~~~~~~~~~~~~~~~~~~ 108 (528)
T PRK07470 32 SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCN--QMFESMFAAFRLGAVWVPTNF-RQTPDEVAYLAEASGARAM 108 (528)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHhCCeEEEecCc-cCCHHHHHHHHHhcCceEE
Confidence 5788887766555443 457888999888876433 445557888999988887654 5688899999999999999
Q ss_pred ecchHHHHH
Q 014065 257 TAVPTIHQI 265 (431)
Q Consensus 257 ~~~p~~~~~ 265 (431)
+..+...+.
T Consensus 109 i~~~~~~~~ 117 (528)
T PRK07470 109 ICHADFPEH 117 (528)
T ss_pred EEcchhHHH
Confidence 888765443
No 208
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=56.73 E-value=1.5e+02 Score=29.93 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=66.4
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
++.++++. .+..+|. .-.+|...+...+..+.. ..++.++|++...+|..- .....+++++..|+..+...+
T Consensus 67 p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 67 PEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIA--EAAFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCcEEEeeCC
Confidence 45666543 2222222 345788888766555443 458899999999988643 334458888999998876654
Q ss_pred CCCChhhHHHHHHHhcceeeecch
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVP 260 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p 260 (431)
.+....+...+++.++..++...
T Consensus 142 -~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 -GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred -CCCHHHHHHHHHhcCCcEEEEcc
Confidence 67888999999999999888754
No 209
>PRK08308 acyl-CoA synthetase; Validated
Probab=56.69 E-value=1.3e+02 Score=28.34 Aligned_cols=83 Identities=11% Similarity=0.097 Sum_probs=60.0
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH--HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTV--EFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
..+|++.+...+..+... .++.++|++...+|... ..+..+++.+..|+..+..+. .+...+...+++.++.++
T Consensus 119 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN-KNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC-CCHHHHHHHHHHhCCeEE
Confidence 467998888766665544 35678888877777643 345667888999998877654 467778888999999988
Q ss_pred EecCCchhH
Q 014065 107 LTPAEGNAA 115 (431)
Q Consensus 107 i~~~~~~~~ 115 (431)
+..+.....
T Consensus 195 ~~~P~~~~~ 203 (414)
T PRK08308 195 YAVPLMLHI 203 (414)
T ss_pred EcCHHHHHH
Confidence 877654433
No 210
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=55.51 E-value=1.1e+02 Score=30.64 Aligned_cols=84 Identities=13% Similarity=0.120 Sum_probs=62.3
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++...++-.. .++..+++++..|+..+..+. ......+...+++.+++.+
T Consensus 62 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~--~~v~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~l 138 (600)
T PRK08279 62 SISYAELNARANRYAHWAAARGVGKGDVVALLMENRP--EYLAAWLGLAKLGAVVALLNT-QQRGAVLAHSLNLVDAKHL 138 (600)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHhcCcEEeecCC-CCCHHHHHHHHHhcCCCEE
Confidence 5788888766665443 457888999988877543 334558888999998887654 5678889999999999999
Q ss_pred ecchHHHHHH
Q 014065 257 TAVPTIHQIV 266 (431)
Q Consensus 257 ~~~p~~~~~l 266 (431)
+........+
T Consensus 139 i~~~~~~~~~ 148 (600)
T PRK08279 139 IVGEELVEAF 148 (600)
T ss_pred EEChHHHHHH
Confidence 8877665544
No 211
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=55.36 E-value=1.9e+02 Score=28.58 Aligned_cols=79 Identities=18% Similarity=0.207 Sum_probs=60.5
Q ss_pred eechHHHHHHHHHHHHHh---cCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSVY---KLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+...+ ++.++|++...+|-+. .++..+++++..|+..+.... .....++...++..++..+
T Consensus 38 ~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~--e~~~~~~a~~~~Gav~vpln~-~~~~~~l~~~l~~~~~~~~ 114 (534)
T COG0318 38 RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSP--EFLIAFLAALRAGAVAVPLNP-RLTPRELAYILNDAGAKVL 114 (534)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHhcCEEEeecCc-ccCHHHHHHHHHhcCCeEE
Confidence 789999887777665443 4678999888888654 335558888899999987764 4578888888888888888
Q ss_pred ecchH
Q 014065 257 TAVPT 261 (431)
Q Consensus 257 ~~~p~ 261 (431)
+....
T Consensus 115 ~~~~~ 119 (534)
T COG0318 115 ITSAE 119 (534)
T ss_pred EEccc
Confidence 88765
No 212
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=55.35 E-value=1.4e+02 Score=25.81 Aligned_cols=66 Identities=11% Similarity=0.005 Sum_probs=47.2
Q ss_pred HHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 46 RLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 46 ~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
.+.+.|..+++.|... ..+-.-..+.++|...|..++.+-|..........++..+++++.++...
T Consensus 41 ~a~~~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~ 106 (244)
T cd00640 41 LAEEEGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDF 106 (244)
T ss_pred HHHHcCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 3444443345555554 33566677777888899988887777777778888999999999998763
No 213
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=55.27 E-value=60 Score=28.87 Aligned_cols=65 Identities=14% Similarity=0.017 Sum_probs=50.8
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE-ecCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 51 GINAGDVVALTFPNTVEFVIMFLAVIRARATAA-PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v-~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
.+++||.|+=-..||.---++.-=|-..|...+ .+..+-..+++...|+..+++.||++++..+.
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~ 222 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR 222 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch
Confidence 678999999999998776666666666776444 44556678899999999999999998875533
No 214
>PRK13391 acyl-CoA synthetase; Provisional
Probab=55.07 E-value=2e+02 Score=28.01 Aligned_cols=97 Identities=12% Similarity=0.078 Sum_probs=67.6
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
++.++++...++ -.+|...+...+..+.. ..++.+++++....+-... +...+++++..|...+..+.
T Consensus 11 p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~--~~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 11 PDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLR--YLEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHhccEEecccc
Confidence 455565544332 24788888766665544 3478889998888775443 34447888999999987654
Q ss_pred CCCChhhHHHHHHHhcceeeecchHHHHHH
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVPTIHQIV 266 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 266 (431)
..+...+...+++.++..+...+.....+
T Consensus 82 -~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 82 -HLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred -ccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 56888899999999999988877665443
No 215
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=54.96 E-value=98 Score=30.75 Aligned_cols=82 Identities=15% Similarity=0.157 Sum_probs=61.6
Q ss_pred eechHHHHHHHHHHHHH----hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 180 PLTQNNLAASVSNIKSV----YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
.+|...+...+..+... .++.+++++...++-.. .+...+++++..|+..+..++ .+..+++...+++.++..
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~--~~~~~~la~~~~Ga~~v~l~~-~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVL--QYPVAVFGAMRAGLIVVNTNP-LYTAREMEHQFNDSGAKA 125 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCeEEeecCC-CCCHHHHHHHHhccCceE
Confidence 57888887777666543 36889999999888543 334447888999998886654 668889999999999999
Q ss_pred eecchHHHH
Q 014065 256 YTAVPTIHQ 264 (431)
Q Consensus 256 ~~~~p~~~~ 264 (431)
++.......
T Consensus 126 ii~~~~~~~ 134 (562)
T PRK05677 126 LVCLANMAH 134 (562)
T ss_pred EEEecchhh
Confidence 887655443
No 216
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=54.92 E-value=1.1e+02 Score=25.87 Aligned_cols=96 Identities=7% Similarity=-0.103 Sum_probs=0.0
Q ss_pred CCCCeEEEecCh-hhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecc---hHHHHHHHhcccCCCC
Q 014065 200 TESDSTVIVLPL-FHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAV---PTIHQIVLDRHVAKPE 275 (431)
Q Consensus 200 ~~~~~~~~~~p~-~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~---p~~~~~l~~~~~~~~~ 275 (431)
....+++...+- .|..|....-..--..|-.++.... ..+++++.+.+.++++.++.++ +.....+.+.......
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~-~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~ 165 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGV-MVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNR 165 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCC-CCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHh
Q ss_pred CCCCCccEEEeccCCCcHHHHHH
Q 014065 276 PVYPKLRFIRSCSASLAPVILSR 298 (431)
Q Consensus 276 ~~~~~l~~i~~~g~~~~~~~~~~ 298 (431)
... .++ +++||.+++++..+.
T Consensus 166 ~~~-~~~-i~vGG~~~~~~~~~~ 186 (213)
T cd02069 166 RGI-KIP-LLIGGAATSRKHTAV 186 (213)
T ss_pred cCC-CCe-EEEEChhcCHHHHhh
No 217
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=54.65 E-value=31 Score=30.73 Aligned_cols=53 Identities=8% Similarity=0.206 Sum_probs=43.4
Q ss_pred CcccHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 29 FDLTYSRIHE-----LVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 29 ~~~Ty~el~~-----~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
..+.|.++.. ....+...|.+.|+.+++.|.++|.++.....+++++-.+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4577888763 2456777777889999999999999999999999999999975
No 218
>PRK06164 acyl-CoA synthetase; Validated
Probab=54.60 E-value=1.1e+02 Score=30.24 Aligned_cols=95 Identities=13% Similarity=0.031 Sum_probs=68.1
Q ss_pred CCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc-HHHHHHHHHHHHhCcEEEecCCC
Q 014065 18 SSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNT-VEFVIMFLAVIRARATAAPLNAA 88 (431)
Q Consensus 18 p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~ 88 (431)
++.++++... +..+|...+...+..++..+ ++.++|++...+|.+ .-.+..+++++..|+..+.. +.
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PV 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CC
Confidence 4566666522 14578888877766665554 778999998888874 33345678888889887766 45
Q ss_pred CCHHHHHHHHhcCCceEEEecCCchhHH
Q 014065 89 YTPDEFEFYLSDSESKLLLTPAEGNAAA 116 (431)
Q Consensus 89 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 116 (431)
.....+...+++.++..++..+.....+
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~l 283 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRRI 283 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHHH
Confidence 6778889999999999999877655443
No 219
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=54.55 E-value=1.3e+02 Score=29.22 Aligned_cols=84 Identities=11% Similarity=0.109 Sum_probs=61.2
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|..++...+..+.. ..+..+++++...++-. ..+...+++++..|+..+..+. .++...+...+++.+++.+
T Consensus 30 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~--~~~~~~~~a~~~~G~~~v~l~~-~~~~~~l~~~~~~~~~~~~ 106 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDG--VDFPIAFLGAIRAGIVPVALNT-LLTADDYAYMLEDSRARVV 106 (508)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC--HHHHHHHHHHHHcCcEEeeccC-CCCHHHHHHHHHhcCCeEE
Confidence 5677777665554443 45788899888776643 3445558888999999887654 5688999999999999999
Q ss_pred ecchHHHHHH
Q 014065 257 TAVPTIHQIV 266 (431)
Q Consensus 257 ~~~p~~~~~l 266 (431)
+........+
T Consensus 107 i~~~~~~~~~ 116 (508)
T TIGR02262 107 FVSGELLPVI 116 (508)
T ss_pred EEchhhHHHH
Confidence 8877655443
No 220
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=54.49 E-value=1.2e+02 Score=34.35 Aligned_cols=98 Identities=9% Similarity=0.076 Sum_probs=66.4
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
.++.++++...+..........+|+..+...+..+... .+..+++++...++-.. .++..+++++..|+..+..+
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~--~~i~~~lA~l~~G~~~vpld 326 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGV--DLVVAVMGVLKAGATFSVID 326 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCH--HHHHHHHHHHhhCcEEeccC
Confidence 46677765432211111123468999888776665544 47889999988887543 34555889999999988766
Q ss_pred CCCCChhhHHHHHHHhcceeeecc
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAV 259 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~ 259 (431)
+ ...+..+...++..++..++..
T Consensus 327 p-~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 327 P-AYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred C-CCcHHHHHHHHHhcCCCEEEEe
Confidence 4 5677778888888888777654
No 221
>PRK10717 cysteine synthase A; Provisional
Probab=54.27 E-value=1.1e+02 Score=27.98 Aligned_cols=64 Identities=14% Similarity=0.079 Sum_probs=47.5
Q ss_pred HHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 47 LVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 47 L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
..+.| +++|+.|.. ...+-.-..+.++|.+.|..+..+-|....+.....++..++++++++..
T Consensus 55 a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 55 AEKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 33444 467776544 55566667777888899998777777666677888999999999999863
No 222
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=54.11 E-value=1.5e+02 Score=25.95 Aligned_cols=78 Identities=12% Similarity=0.204 Sum_probs=47.5
Q ss_pred cHHHHHH-HHHHHHHHHHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHh------C--cEEEecCCCC---CHHHHHHHH
Q 014065 32 TYSRIHE-LVERAASRLVAAG-INAGDVVALTFPNTVEFVIMFLAVIRA------R--ATAAPLNAAY---TPDEFEFYL 98 (431)
Q Consensus 32 Ty~el~~-~~~~~a~~L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~l~~~l 98 (431)
++..+.+ -.+++.+.+.+.+ +.+|++|++.+.-+.|+++++..+... + ..++-++... ..+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 3334433 2344555566654 578999999999999999888777553 2 3444455432 333345555
Q ss_pred hcCCceEEEec
Q 014065 99 SDSESKLLLTP 109 (431)
Q Consensus 99 ~~~~~~~ii~~ 109 (431)
+..+....+.+
T Consensus 84 ~~lgI~~~v~~ 94 (258)
T PRK10696 84 ESLGVPYHIEE 94 (258)
T ss_pred HHhCCCEEEEE
Confidence 66666655544
No 223
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=53.89 E-value=77 Score=29.45 Aligned_cols=89 Identities=21% Similarity=0.255 Sum_probs=55.8
Q ss_pred HHHHHH-HHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEec
Q 014065 7 IGLLNQ-VIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPL 85 (431)
Q Consensus 7 ~~~l~~-~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 85 (431)
.+.|++ .++....+-++...++ ...+-..|...|+++||.|++-.- .+..+.-|+..+|+.++.+
T Consensus 27 ~~~fE~~~a~~~g~~~~~~~~sg-----------t~Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~ 92 (363)
T PF01041_consen 27 VEEFEKEFAEYFGVKYAVAVSSG-----------TSALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFV 92 (363)
T ss_dssp HHHHHHHHHHHHTSSEEEEESSH-----------HHHHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE
T ss_pred HHHHHHHHHHHhCCCeEEEeCCh-----------hHHHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEE
Confidence 344444 3444455555555444 345566677789999998888643 3566778899999999988
Q ss_pred CCC-----CCHHHHHHHHhcCCceEEEecC
Q 014065 86 NAA-----YTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 86 ~~~-----~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
+-+ ++.+.++..+.... ++|+...
T Consensus 93 Di~~~~~~id~~~~~~~i~~~t-~ai~~~h 121 (363)
T PF01041_consen 93 DIDPETLNIDPEALEKAITPKT-KAILVVH 121 (363)
T ss_dssp -BETTTSSB-HHHHHHHHHTTE-EEEEEE-
T ss_pred eccCCcCCcCHHHHHHHhccCc-cEEEEec
Confidence 644 35778888877554 6666543
No 224
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=53.39 E-value=1.1e+02 Score=29.86 Aligned_cols=85 Identities=9% Similarity=0.049 Sum_probs=62.5
Q ss_pred eechHHHHHHHHHHH---HHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIK---SVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+. ...++.+++++....|-.. .+...+++.+..|+..+..+. ......+...+++.+++.+
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~--~~~~~~lA~~~~G~~~v~l~~-~~~~~~~~~~l~~~~~~~i 87 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDF--AFFEAAYAAMRLGAYAVPVNW-HFKPEEIAYILEDSGARVL 87 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCeEEEecCc-ccCHHHHHHHHhccCCcEE
Confidence 467777765555444 3457889999988877543 334458888899999887664 5688889999999999999
Q ss_pred ecchHHHHHHH
Q 014065 257 TAVPTIHQIVL 267 (431)
Q Consensus 257 ~~~p~~~~~l~ 267 (431)
+......+.+.
T Consensus 88 ~~~~~~~~~~~ 98 (509)
T PRK12406 88 IAHADLLHGLA 98 (509)
T ss_pred EEccchhhhhh
Confidence 88776666543
No 225
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=53.37 E-value=41 Score=22.94 Aligned_cols=65 Identities=18% Similarity=0.164 Sum_probs=49.8
Q ss_pred cccHHHHHHHHHHHHH---HHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceE
Q 014065 30 DLTYSRIHELVERAAS---RLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~---~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
..||+||.+.-+.+++ +|....++..|-|+|+-=++..+ .-++.++...+.++++..+++.+++.
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 6899999998877764 45556788889999997776432 23466778888999999998888764
No 226
>PRK09088 acyl-CoA synthetase; Validated
Probab=53.35 E-value=1.7e+02 Score=28.28 Aligned_cols=78 Identities=14% Similarity=0.014 Sum_probs=57.9
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++...++-... +...+++++..|+..+..+. ......+...+++.+++.+
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~~~~-~~~~~~~~~~~~~~~~~~i 98 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVW--LVALHFACARVGAIYVPLNW-RLSASELDALLQDAEPRLL 98 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEeeCc-cCCHHHHHHHHHhCCCCEE
Confidence 5788888766655443 4468889998888775443 34447888889988886654 5688889999999999888
Q ss_pred ecch
Q 014065 257 TAVP 260 (431)
Q Consensus 257 ~~~p 260 (431)
+...
T Consensus 99 i~~~ 102 (488)
T PRK09088 99 LGDD 102 (488)
T ss_pred EEcc
Confidence 7654
No 227
>PRK07638 acyl-CoA synthetase; Validated
Probab=53.01 E-value=1e+02 Score=29.80 Aligned_cols=85 Identities=9% Similarity=0.022 Sum_probs=61.0
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE-FVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLL 107 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 107 (431)
..+|.+.+...+...+ ...+++++|++....+-... ++...+..+..|+..+.. +..+...+...+++.+++++.
T Consensus 161 v~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 4577777766555443 33478899998887665433 355667778889988765 556788899999999999999
Q ss_pred ecCCchhHHH
Q 014065 108 TPAEGNAAAQ 117 (431)
Q Consensus 108 ~~~~~~~~~~ 117 (431)
..+.....+.
T Consensus 237 ~~P~~~~~l~ 246 (487)
T PRK07638 237 TVPTMLESLY 246 (487)
T ss_pred eCcHHHHHHH
Confidence 9887654443
No 228
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=52.92 E-value=99 Score=30.70 Aligned_cols=81 Identities=14% Similarity=0.176 Sum_probs=60.0
Q ss_pred eeechHHHHHHHHHHHHHh----cCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcce
Q 014065 179 VPLTQNNLAASVSNIKSVY----KLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNAT 254 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t 254 (431)
..+|...+......+...+ ++.++|++...++-.. .+...+++++..|+..+.... ......+...+++.+++
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~--e~~~~~la~~~~G~v~v~~~~-~~~~~~l~~~l~~~~~~ 124 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVL--QYPIAVFGALRAGLIVVNTNP-LYTAREMRHQFKDSGAR 124 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCeEEeccCc-cCCHHHHHHHHhccCce
Confidence 3678888877666655433 7889999988877544 344557888889988876554 56888999999999999
Q ss_pred eeecchHH
Q 014065 255 WYTAVPTI 262 (431)
Q Consensus 255 ~~~~~p~~ 262 (431)
.+...+..
T Consensus 125 ~~i~~~~~ 132 (562)
T PRK12492 125 ALVYLNMF 132 (562)
T ss_pred EEEecccc
Confidence 88876543
No 229
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=52.87 E-value=84 Score=31.25 Aligned_cols=79 Identities=19% Similarity=0.096 Sum_probs=59.4
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.++|++...++-.. .+...+++++..|+..+..+. .+...++...+++.+++.+
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~--~~~~~~la~~~~Gav~vpl~~-~~~~~~l~~~l~~~~~~~i 108 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSD--LYLEWLLAVACAGGIVAPLNY-RWSFEEAKSAMLLVRPVML 108 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHhhccEEEEeCCc-ccCHHHHHHHHHhcCceEE
Confidence 5788888766665544 357899999999887543 334447888888988886654 6788999999999999888
Q ss_pred ecchH
Q 014065 257 TAVPT 261 (431)
Q Consensus 257 ~~~p~ 261 (431)
+..+.
T Consensus 109 ~~~~~ 113 (563)
T PLN02860 109 VTDET 113 (563)
T ss_pred EEecc
Confidence 87653
No 230
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=52.60 E-value=36 Score=23.21 Aligned_cols=46 Identities=22% Similarity=0.283 Sum_probs=28.9
Q ss_pred cccHHHHHHHHHHhcCC-----c-ceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECC
Q 014065 3 GVTLIGLLNQVIDQFSS-----K-RALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFP 63 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~-----~-~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~ 63 (431)
+.|+.++++....++|. + ...+.-+++.++ .+.-++.||.|+++-|
T Consensus 25 ~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~---------------~~~~l~~gD~v~i~pp 76 (80)
T cd00754 25 GATVGELLDALEARYPGLLEELLARVRIAVNGEYVR---------------LDTPLKDGDEVAIIPP 76 (80)
T ss_pred CCcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcC---------------CCcccCCCCEEEEeCC
Confidence 46788888888777764 1 222233444444 2235789999998866
No 231
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=52.37 E-value=1.1e+02 Score=23.92 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHc---CCCCCCEEEEE-CCCcHH-HHHHHHHHHHhCcEEEecCCCC-------CHHHHHHHHhcC
Q 014065 34 SRIHELVERAASRLVAA---GINAGDVVALT-FPNTVE-FVIMFLAVIRARATAAPLNAAY-------TPDEFEFYLSDS 101 (431)
Q Consensus 34 ~el~~~~~~~a~~L~~~---gl~~gd~V~i~-~~n~~~-~~~~~lA~~~~G~~~v~l~~~~-------~~~~l~~~l~~~ 101 (431)
..+.+++..+-....+. ..-+|..|+++ ..+|.. -+....|+.++|+.++.+++.. +.++....+...
T Consensus 15 ~~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~ 94 (142)
T PF02729_consen 15 EALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY 94 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh
Confidence 34555555555555443 34466766655 555655 5556688999999999998554 345666677777
Q ss_pred CceEEEecCCchhHHHHHHHhcCcc
Q 014065 102 ESKLLLTPAEGNAAAQAAASKLNIS 126 (431)
Q Consensus 102 ~~~~ii~~~~~~~~~~~~~~~~~~~ 126 (431)
++++++-......+.+.++....+
T Consensus 95 -~D~iv~R~~~~~~~~~~a~~~~vP 118 (142)
T PF02729_consen 95 -VDAIVIRHPSHGALEELAEHSSVP 118 (142)
T ss_dssp -CSEEEEEESSHHHHHHHHHHCSSE
T ss_pred -hheEEEEeccchHHHHHHHhccCC
Confidence 888888777777777776665443
No 232
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=52.28 E-value=1.2e+02 Score=31.20 Aligned_cols=91 Identities=11% Similarity=0.058 Sum_probs=62.5
Q ss_pred CCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc--HHHHHHHHHHHHhCcEEEecCC
Q 014065 18 SSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNT--VEFVIMFLAVIRARATAAPLNA 87 (431)
Q Consensus 18 p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~ 87 (431)
++.+|++... +..+|++.+...+..+... .++.++|++...+|-. ..+...+++.+..|+..+..+.
T Consensus 364 ~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~ 440 (718)
T PRK08043 364 PEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTI---ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPS 440 (718)
T ss_pred CCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCC
Confidence 4666665432 2468888887766655433 3788999998888753 3344567888899998887664
Q ss_pred CCCHHHHHHHHhcCCceEEEecCC
Q 014065 88 AYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 88 ~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
......+...+.+.++..+...+.
T Consensus 441 ~~~~~~~~~~i~~~~vt~~~~~p~ 464 (718)
T PRK08043 441 PLHYRIVPELVYDRNCTVLFGTST 464 (718)
T ss_pred cccHHHHHHHHHhcCCeEEEchHH
Confidence 445556677788888888876544
No 233
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=52.26 E-value=2.8e+02 Score=28.39 Aligned_cols=85 Identities=8% Similarity=-0.115 Sum_probs=63.0
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.++|++...++-.. .+....++++..|+..+-... .+.++.+...+++.+++.+
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--ew~~~~lA~~~~G~v~vpl~~-~~~~~~l~~il~~~~~~~v 152 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCP--QWIVAMEACAAHSLICVPLYD-TLGPGAVDYIVDHAEIDFV 152 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEEecc-CCCHHHHHHHHhccCCCEE
Confidence 4688888777666554 347899999988887543 344557888889988875543 6788999999999999999
Q ss_pred ecchHHHHHHH
Q 014065 257 TAVPTIHQIVL 267 (431)
Q Consensus 257 ~~~p~~~~~l~ 267 (431)
+.....+...+
T Consensus 153 ~~~~~~~~~~~ 163 (660)
T PLN02430 153 FVQDKKIKELL 163 (660)
T ss_pred EECHHHHHHHH
Confidence 98776544433
No 234
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=52.19 E-value=1.5e+02 Score=28.78 Aligned_cols=84 Identities=14% Similarity=0.059 Sum_probs=61.0
Q ss_pred eechHHHHHHHHHHH---HHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIK---SVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+. ...++.+++++....+-... ....+++++..|+..+..+. .+....+...+++.+++.+
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~l~~-~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPE--FFEVYWAARRSGLYYTPINW-HLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHH--HHHHHHHHHhcCcEEEeccc-ccCHHHHHHHHhcCCCCEE
Confidence 477777766555444 34578899999888875433 23348888999999886654 5678888899999999988
Q ss_pred ecchHHHHHH
Q 014065 257 TAVPTIHQIV 266 (431)
Q Consensus 257 ~~~p~~~~~l 266 (431)
+..+.....+
T Consensus 88 i~~~~~~~~~ 97 (502)
T PRK08276 88 IVSAALADTA 97 (502)
T ss_pred EEccchhhHH
Confidence 8877665544
No 235
>PLN02479 acetate-CoA ligase
Probab=52.01 E-value=1.4e+02 Score=29.74 Aligned_cols=83 Identities=13% Similarity=0.097 Sum_probs=62.5
Q ss_pred eechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+... .++.++|++....+-.- .+...+++++..|+..+..+. .+...++...+++.+++.+
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l~~-~~~~~~l~~~l~~~~~~~i 121 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIP--AMYEAHFGVPMAGAVVNCVNI-RLNAPTIAFLLEHSKSEVV 121 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH--HHHHHHHHHHhCCcEEEEecc-ccCHHHHHHHHhhcCceEE
Confidence 46888877666655444 47899999998888543 334447888889988876654 6788899999999999999
Q ss_pred ecchHHHHH
Q 014065 257 TAVPTIHQI 265 (431)
Q Consensus 257 ~~~p~~~~~ 265 (431)
+..+..+..
T Consensus 122 i~~~~~~~~ 130 (567)
T PLN02479 122 MVDQEFFTL 130 (567)
T ss_pred EEchhhhhH
Confidence 987765443
No 236
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=51.91 E-value=26 Score=29.08 Aligned_cols=35 Identities=23% Similarity=0.413 Sum_probs=29.8
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECC
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFP 63 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~ 63 (431)
.-+||.++++.+.++|..+++.|.+|.-.||+.-.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRG 39 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIARG 39 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCC
Confidence 45899999999999999999999999766666543
No 237
>PRK06188 acyl-CoA synthetase; Validated
Probab=50.91 E-value=1e+02 Score=30.20 Aligned_cols=81 Identities=12% Similarity=0.009 Sum_probs=60.5
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
..+|+..+...+.... ...++..+|++...+|-+..+...+++.+..|+..+..+. ...+.+...+++.++.++..
T Consensus 186 v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHhCCEEEEe
Confidence 4477877776554433 3347888999998888876666667788888998877754 56788899999999999988
Q ss_pred cCCch
Q 014065 109 PAEGN 113 (431)
Q Consensus 109 ~~~~~ 113 (431)
.+...
T Consensus 262 ~P~~l 266 (524)
T PRK06188 262 VPTMI 266 (524)
T ss_pred hHHHH
Confidence 66544
No 238
>PRK06381 threonine synthase; Validated
Probab=50.86 E-value=78 Score=28.80 Aligned_cols=63 Identities=5% Similarity=-0.156 Sum_probs=45.6
Q ss_pred HHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 46 RLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 46 ~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
.+.+.|. +.| +....+-.-+.+.++|...|..++.+-|..........++..++++++++.+.
T Consensus 57 ~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~ 119 (319)
T PRK06381 57 RAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKY 119 (319)
T ss_pred HHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCH
Confidence 3445453 344 34556777778888999999987776666565666778999999999998753
No 239
>PRK07476 eutB threonine dehydratase; Provisional
Probab=50.45 E-value=1.4e+02 Score=27.28 Aligned_cols=50 Identities=6% Similarity=-0.121 Sum_probs=39.5
Q ss_pred CCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 63 PNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 63 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
..+-.-..+.++|.+.|..++.+-|..........++..++++++++...
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~ 123 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQ 123 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 44566777788889999987777777666777888999999999998653
No 240
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=50.28 E-value=21 Score=23.85 Aligned_cols=31 Identities=23% Similarity=0.184 Sum_probs=17.6
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 014065 30 DLTYSRIHELVERAASRLVAAGINAGDVVAL 60 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i 60 (431)
++-|=+-.-+...+-..|+++|+++||.|-|
T Consensus 32 ~~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 32 SLRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp GHHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 3333333334445567788889999999876
No 241
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=50.25 E-value=1.3e+02 Score=28.97 Aligned_cols=64 Identities=14% Similarity=0.059 Sum_probs=47.6
Q ss_pred HHHcCC-CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 47 LVAAGI-NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 47 L~~~gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
..+.|. .+|+.|.-. ..+-.-..+.++|.+.|..+..+=|....+.....++..++++++++..
T Consensus 53 a~~~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (454)
T TIGR01137 53 AEASGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPTA 117 (454)
T ss_pred HHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCCc
Confidence 334454 677765444 5566777788899999998877777666667788899999999999753
No 242
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=49.91 E-value=48 Score=27.50 Aligned_cols=56 Identities=18% Similarity=0.239 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 35 RIHELVERAASRLVA-AGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 35 el~~~~~~~a~~L~~-~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
-..+|.+-+++.+.+ .++++||+..++.. +|..++|+ ++....+..++++|.+..-
T Consensus 84 s~lErieg~~~~~l~~~~i~~~DVliviSn--------------SGrNpvpi-------e~A~~~rekGa~vI~vTSl 140 (243)
T COG4821 84 SYLERIEGYAKLFLHRLQIRPNDVLIVISN--------------SGRNPVPI-------EVAEYAREKGAKVIAVTSL 140 (243)
T ss_pred chhHhhhhHHHHHHHHhcCCCCCEEEEEeC--------------CCCCCcch-------HHHHHHHhcCCeEEEEehh
Confidence 346788888888876 49999997666654 35556665 5677788888888887653
No 243
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=49.85 E-value=94 Score=28.52 Aligned_cols=61 Identities=13% Similarity=0.068 Sum_probs=45.2
Q ss_pred HHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecC
Q 014065 46 RLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 46 ~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
.|+..+++||++|+|..--+.-.++..+|-.. |+.++.++.+. +-....++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~~---~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRSE---EKLELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCCh---HHHHHHHHhCCcEEEEcC
Confidence 35556899999999998889999999998754 37766665442 234556777888888765
No 244
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=49.67 E-value=1.8e+02 Score=28.01 Aligned_cols=63 Identities=21% Similarity=0.351 Sum_probs=46.6
Q ss_pred ccHHHHHHHHHHhc-----CCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH
Q 014065 4 VTLIGLLNQVIDQF-----SSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE 67 (431)
Q Consensus 4 ~tl~~~l~~~a~~~-----p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~ 67 (431)
..+.+.+.+....+ -+..|+...+....+|+++.+.++.++..+.+. ++++..+.+++.+..-
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal~g~~~~~f~~iq~lA~~i~~~~~~~-~~~~~Plivv~e~D~a 420 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALALPGKPNPSFAEIQELAEAIAEGMAEL-INPDQPLIVVVEQDMA 420 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEECchHH
Confidence 35566666665553 345666667777999999999999999999876 5677777777777644
No 245
>PRK13382 acyl-CoA synthetase; Provisional
Probab=49.40 E-value=1.8e+02 Score=28.74 Aligned_cols=83 Identities=14% Similarity=0.157 Sum_probs=61.4
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++...++-.- .+...+++.+..|+..+..+. ......+...+++.+++.+
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~vpl~~-~~~~~~l~~~l~~~~~~~v 144 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHR--GFVEALLAANRIGADILLLNT-SFAGPALAEVVTREGVDTV 144 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcH--HHHHHHHHHHHcCcEEEecCc-ccCHHHHHHHHHhcCCCEE
Confidence 5788887666555444 447889999988887544 345558888999999987664 5678889999999999998
Q ss_pred ecchHHHHH
Q 014065 257 TAVPTIHQI 265 (431)
Q Consensus 257 ~~~p~~~~~ 265 (431)
+........
T Consensus 145 i~~~~~~~~ 153 (537)
T PRK13382 145 IYDEEFSAT 153 (537)
T ss_pred EEchhhHHH
Confidence 876654433
No 246
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=48.44 E-value=50 Score=24.52 Aligned_cols=52 Identities=15% Similarity=0.206 Sum_probs=37.9
Q ss_pred cccHHHHHHH------HHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 30 DLTYSRIHEL------VERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 30 ~~Ty~el~~~------~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
.+.+.++... -..+...+...|+.+++.|.+++..+.....+...+..+|..
T Consensus 47 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 47 NIPWTSLLDEDGTFKSPEELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred ccChHHhcCCCCCcCCHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4556555421 245666777789989999999999988877777778888863
No 247
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=48.32 E-value=1.1e+02 Score=30.07 Aligned_cols=77 Identities=16% Similarity=0.153 Sum_probs=57.8
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++...+|-.- .+...+++++..|+..+..++ .+....+...++..++..+
T Consensus 49 ~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~l 125 (547)
T PRK06087 49 SYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWC--EFTIIYLACLKVGAVSVPLLP-SWREAELVWVLNKCQAKMF 125 (547)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeccch-hcCHHHHHHHHHhcCCeEE
Confidence 5788888766665444 457889999988877543 344558899999998886654 5678888899999998887
Q ss_pred ecc
Q 014065 257 TAV 259 (431)
Q Consensus 257 ~~~ 259 (431)
+..
T Consensus 126 ~~~ 128 (547)
T PRK06087 126 FAP 128 (547)
T ss_pred EEe
Confidence 764
No 248
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.91 E-value=2.9e+02 Score=27.44 Aligned_cols=85 Identities=11% Similarity=0.035 Sum_probs=62.9
Q ss_pred eeechHHHHHHHHHHHH----HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcce
Q 014065 179 VPLTQNNLAASVSNIKS----VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNAT 254 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t 254 (431)
-.+|...+...+..+.. ..++.+++++....+-... ....+++.+..|+..+..++ ......+...++..+++
T Consensus 37 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e--~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~ 113 (576)
T PRK05620 37 EQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAE--HLEVLFAVACMGAVFNPLNK-QLMNDQIVHIINHAEDE 113 (576)
T ss_pred EEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHH--HHHHHHHHHhcCCEEeeccc-ccCHHHHHHHHhccCCc
Confidence 46788888766655444 3578889998888775443 33447888889998887654 56788999999999999
Q ss_pred eeecchHHHHHH
Q 014065 255 WYTAVPTIHQIV 266 (431)
Q Consensus 255 ~~~~~p~~~~~l 266 (431)
.++..+.....+
T Consensus 114 ~~i~~~~~~~~~ 125 (576)
T PRK05620 114 VIVADPRLAEQL 125 (576)
T ss_pred EEEEChhhHHHH
Confidence 999887766554
No 249
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=47.83 E-value=24 Score=23.61 Aligned_cols=19 Identities=32% Similarity=0.459 Sum_probs=15.0
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q 014065 43 AASRLVAAGINAGDVVALT 61 (431)
Q Consensus 43 ~a~~L~~~gl~~gd~V~i~ 61 (431)
+-..|+++|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4566777899999999875
No 250
>PRK06178 acyl-CoA synthetase; Validated
Probab=47.79 E-value=1.6e+02 Score=29.15 Aligned_cols=85 Identities=13% Similarity=0.113 Sum_probs=63.4
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++...++-... +...+++++..|+..+..++ ......+...+++.++..+
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~p-~~~~~~~~~~l~~~~~~~i 134 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ--FHIVFFGILKLGAVHVPVSP-LFREHELSYELNDAGAEVL 134 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH--HHHHHHHHHHhCeEEeecCC-CCCHHHHHHHHHhcCCcEE
Confidence 5788888766655444 3478889998888776543 34447888889988876553 5678889999999999999
Q ss_pred ecchHHHHHHH
Q 014065 257 TAVPTIHQIVL 267 (431)
Q Consensus 257 ~~~p~~~~~l~ 267 (431)
+..+.....+.
T Consensus 135 i~~~~~~~~l~ 145 (567)
T PRK06178 135 LALDQLAPVVE 145 (567)
T ss_pred EEccchHHHHH
Confidence 99888766553
No 251
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=47.64 E-value=1.8e+02 Score=28.83 Aligned_cols=84 Identities=11% Similarity=0.116 Sum_probs=61.5
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.+++++...++-... ....+++++..|+..+..++ ......+...+++.+++.
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~--~~~~~la~~~~G~~~v~v~~-~~~~~~~~~~~~~~~~~~ 123 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQ--YPVAIAAVLRAGYVVVNVNP-LYTPRELEHQLKDSGAEA 123 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCeEEeccCc-ccCHHHHHHHHHccCceE
Confidence 36788888776665544 3478899998888775433 23447888999999986653 567888999999999999
Q ss_pred eecchHHHHH
Q 014065 256 YTAVPTIHQI 265 (431)
Q Consensus 256 ~~~~p~~~~~ 265 (431)
++........
T Consensus 124 vi~~~~~~~~ 133 (557)
T PRK07059 124 IVVLENFATT 133 (557)
T ss_pred EEEchhhHHH
Confidence 8877655443
No 252
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=47.36 E-value=2.1e+02 Score=25.57 Aligned_cols=65 Identities=11% Similarity=0.059 Sum_probs=48.0
Q ss_pred HHHcCC-CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 47 LVAAGI-NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 47 L~~~gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
+.+.|. ++|+.|+. ...+-.-..+.++|.+.|..++.+-|..........++..++++++++...
T Consensus 44 a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 44 AEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 344453 35666554 566677777888899999988777776666667788999999999998764
No 253
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=47.31 E-value=1.2e+02 Score=28.26 Aligned_cols=66 Identities=18% Similarity=0.101 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCC-----CCCHHHHHHHHhc---CCceEEEec
Q 014065 41 ERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNA-----AYTPDEFEFYLSD---SESKLLLTP 109 (431)
Q Consensus 41 ~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~ii~~ 109 (431)
..+...+...++++||.|.+-.+.. ....-++...|+.++.++. ..+.+.+...++. .+.++|+..
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe
Confidence 3444445555788999877766543 3344566778887766543 2467778888863 355666643
No 254
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=47.12 E-value=44 Score=30.44 Aligned_cols=52 Identities=17% Similarity=0.245 Sum_probs=42.2
Q ss_pred cccHHHHHHH------HHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 30 DLTYSRIHEL------VERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 30 ~~Ty~el~~~------~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
.+-|.++... ...+...+.+.|+.+++.|.++|..+.....+++++..+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4667776542 466777788889999999999999999999999999999975
No 255
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=46.92 E-value=3.2e+02 Score=27.53 Aligned_cols=86 Identities=17% Similarity=0.164 Sum_probs=60.9
Q ss_pred eeechHHHHHHHHHHHHHh--cCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCC--hhhHHHHHHHhcce
Q 014065 179 VPLTQNNLAASVSNIKSVY--KLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFS--ASTFWQDMIKYNAT 254 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~--~~~~~~~i~~~~~t 254 (431)
..+|...+...+..+...+ .+.++|++...++-.. .++..+++++..|+..+........ .+++...+++.++.
T Consensus 67 ~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~--e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 144 (612)
T PRK12476 67 VELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGI--DYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPT 144 (612)
T ss_pred eEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCCh--hHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCC
Confidence 3678888877666554433 2678999998888654 4455588899999988754211232 67888999999999
Q ss_pred eeecchHHHHHH
Q 014065 255 WYTAVPTIHQIV 266 (431)
Q Consensus 255 ~~~~~p~~~~~l 266 (431)
.++..+.....+
T Consensus 145 ~li~~~~~~~~~ 156 (612)
T PRK12476 145 VVLTTTAAAEAV 156 (612)
T ss_pred EEEEcHHHHHHH
Confidence 999887665543
No 256
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=46.27 E-value=55 Score=22.50 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=33.1
Q ss_pred HHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEe
Q 014065 45 SRLVA-AGINAGDVVALTFPNTVEFVIMFLAVIRARATAAP 84 (431)
Q Consensus 45 ~~L~~-~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 84 (431)
.+|.+ .|+++|+.++.+..+..|.+..+=|++++.-+-+.
T Consensus 4 sYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~ 44 (87)
T cd07050 4 SYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELA 44 (87)
T ss_pred hhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeE
Confidence 34555 49999999999999999999999999998865443
No 257
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=45.98 E-value=1.7e+02 Score=28.77 Aligned_cols=83 Identities=12% Similarity=0.081 Sum_probs=60.4
Q ss_pred eechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+... .++.+++++...++-... +...+++++..|...+.... ......+...+++.+++.+
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~--~~~~~~a~~~~G~~~vpl~~-~~~~~~~~~~l~~~~~~~i 118 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTE--FVESVLAANMLGAIAVPVNF-RLTPPEIAFLVSDCGAHVV 118 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEEcCc-cCCHHHHHHHHHhCCCcEE
Confidence 57888887666654443 478889988888774333 34458888899998886653 5678889999999999888
Q ss_pred ecchHHHHH
Q 014065 257 TAVPTIHQI 265 (431)
Q Consensus 257 ~~~p~~~~~ 265 (431)
+..+.....
T Consensus 119 i~~~~~~~~ 127 (542)
T PRK07786 119 VTEAALAPV 127 (542)
T ss_pred EEccchHHH
Confidence 887665443
No 258
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=45.13 E-value=66 Score=26.42 Aligned_cols=46 Identities=11% Similarity=0.080 Sum_probs=32.9
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAV 75 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 75 (431)
.-+||.|+.+.+.++|..+.+. +...+.+.+...++-..++..+|-
T Consensus 15 ~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 15 CLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred EeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 5789999999999999999985 222233556666666666666653
No 259
>PRK05850 acyl-CoA synthetase; Validated
Probab=45.08 E-value=3.2e+02 Score=27.12 Aligned_cols=85 Identities=14% Similarity=0.086 Sum_probs=61.2
Q ss_pred eeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC--CCChhhHHHHHHHhcc
Q 014065 179 VPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG--RFSASTFWQDMIKYNA 253 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~ 253 (431)
..+|+..+...+..+... .+ .+++++...++-.. .+...+++++..|+.++..+.. ......+...++..++
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~ 110 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL--EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSP 110 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc--cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCC
Confidence 468888887666554443 34 46888888888543 4455588889999998876531 2356788899999999
Q ss_pred eeeecchHHHHHH
Q 014065 254 TWYTAVPTIHQIV 266 (431)
Q Consensus 254 t~~~~~p~~~~~l 266 (431)
..++..+.....+
T Consensus 111 ~~il~~~~~~~~~ 123 (578)
T PRK05850 111 SVVLTTSAVVDDV 123 (578)
T ss_pred CEEEEcHHHHHHH
Confidence 9999888766654
No 260
>PRK06060 acyl-CoA synthetase; Validated
Probab=44.99 E-value=1.6e+02 Score=30.24 Aligned_cols=81 Identities=12% Similarity=0.169 Sum_probs=58.8
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++...++-+. .++..+++++..|+..+..++ .+....+...+++.++..+
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~--~~~~~~la~~~aG~~~vpi~p-~~~~~~l~~~l~~~~~~~v 106 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSP--DLVQLLLACLARGVMAFLANP-ELHRDDHALAARNTEPALV 106 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCcEEEecCC-CCCHHHHHHHHhcCCCcEE
Confidence 3788888766665544 457889999988887544 334458888999998876553 5677788888888888888
Q ss_pred ecchHHH
Q 014065 257 TAVPTIH 263 (431)
Q Consensus 257 ~~~p~~~ 263 (431)
+......
T Consensus 107 i~~~~~~ 113 (705)
T PRK06060 107 VTSDALR 113 (705)
T ss_pred EEchHHh
Confidence 7665443
No 261
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=44.51 E-value=2.7e+02 Score=26.90 Aligned_cols=68 Identities=13% Similarity=0.155 Sum_probs=43.1
Q ss_pred cccHHHHHHHHHHH--------------HHHH-HHcCCCCCCEEEEECCCcHHHHHHHHH-HHHhCcEEE----------
Q 014065 30 DLTYSRIHELVERA--------------ASRL-VAAGINAGDVVALTFPNTVEFVIMFLA-VIRARATAA---------- 83 (431)
Q Consensus 30 ~~Ty~el~~~~~~~--------------a~~L-~~~gl~~gd~V~i~~~n~~~~~~~~lA-~~~~G~~~v---------- 83 (431)
.-||.+|.+++..+ |..+ ...++++||.| .+..++.+.-| +...|++++
T Consensus 77 d~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~ 151 (460)
T PRK13237 77 SRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDA 151 (460)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeeccccccc
Confidence 45777887776544 3333 23589999965 33334444444 677888776
Q ss_pred ----ecCCCCCHHHHHHHHhcCC
Q 014065 84 ----PLNAAYTPDEFEFYLSDSE 102 (431)
Q Consensus 84 ----~l~~~~~~~~l~~~l~~~~ 102 (431)
|..-+++.+.++..+...+
T Consensus 152 ~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 152 QSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred ccCCCCCCCcCHHHHHHHhcccc
Confidence 3344567888999887643
No 262
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=44.44 E-value=2.4e+02 Score=29.10 Aligned_cols=87 Identities=11% Similarity=0.022 Sum_probs=64.0
Q ss_pred eeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcce
Q 014065 178 GVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNAT 254 (431)
Q Consensus 178 ~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t 254 (431)
...+|...+...+..+.. ..++.++|++...++-. ..+....++++..|+..+-... .++++.+...+++.+++
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~v~vpl~~-~~~~~~l~~il~~s~~~ 195 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETR--WEWLASIYGIWSQSMVAATVYA-NLGEDALAYALRETECK 195 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCCeEEeeCC-CCCHHHHHhhhhccCcc
Confidence 467888888777666544 45789999998888754 3445557888888988775443 56788888888999999
Q ss_pred eeecchHHHHHHH
Q 014065 255 WYTAVPTIHQIVL 267 (431)
Q Consensus 255 ~~~~~p~~~~~l~ 267 (431)
.++.....+..+.
T Consensus 196 ~lv~~~~~~~~l~ 208 (700)
T PTZ00216 196 AIVCNGKNVPNLL 208 (700)
T ss_pred EEEECHHHHHHHH
Confidence 9888776655443
No 263
>PRK05852 acyl-CoA synthetase; Validated
Probab=44.41 E-value=1.5e+02 Score=29.20 Aligned_cols=76 Identities=13% Similarity=0.061 Sum_probs=56.8
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++...++-.- .+...+++++..|...+..+. .++...+...++..+++.+
T Consensus 43 ~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~i 119 (534)
T PRK05852 43 AISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNA--EFVVALLAASRADLVVVPLDP-ALPIAEQRVRSQAAGARVV 119 (534)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcH--HHHHHHHHHHHcCcEEeecCC-CCCcHHHHHHHHhCCCCEE
Confidence 5788888766555444 457889999988877543 334458888999999986654 5678889999999999888
Q ss_pred ec
Q 014065 257 TA 258 (431)
Q Consensus 257 ~~ 258 (431)
+.
T Consensus 120 i~ 121 (534)
T PRK05852 120 LI 121 (534)
T ss_pred EE
Confidence 74
No 264
>PRK07867 acyl-CoA synthetase; Validated
Probab=44.25 E-value=1.9e+02 Score=28.40 Aligned_cols=83 Identities=6% Similarity=-0.064 Sum_probs=60.8
Q ss_pred eechHHHHHHHHHHHHHh----cCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 180 PLTQNNLAASVSNIKSVY----KLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
.+|...+...+..+...+ +..+++++...++-.- .+...+++++..|..++..+. ......+...+++.+++.
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~ 104 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNP-TRRGAALARDIAHADCQL 104 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecC-CCChHHHHHHHHhCCCeE
Confidence 578888877666555443 4566788777776432 344458889999999986553 668889999999999999
Q ss_pred eecchHHHHH
Q 014065 256 YTAVPTIHQI 265 (431)
Q Consensus 256 ~~~~p~~~~~ 265 (431)
++........
T Consensus 105 li~~~~~~~~ 114 (529)
T PRK07867 105 VLTESAHAEL 114 (529)
T ss_pred EEECHhHHHH
Confidence 9988766554
No 265
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=44.15 E-value=3e+02 Score=26.44 Aligned_cols=56 Identities=16% Similarity=0.144 Sum_probs=31.7
Q ss_pred CCCCCEEEEECCCcHHHHHH--HHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIM--FLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~--~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+++||.|.+.. +....... -..+.+.|+.+..++...+.+.++..++. +.++|++.
T Consensus 97 l~~GD~VI~~~-~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e 154 (432)
T PRK06702 97 CSSGDHLLCSS-TVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAE 154 (432)
T ss_pred cCCCCEEEECC-CchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEE
Confidence 56777765533 33221222 22346677777777766666777777754 45555544
No 266
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=44.13 E-value=1.7e+02 Score=28.89 Aligned_cols=84 Identities=12% Similarity=0.004 Sum_probs=60.8
Q ss_pred eeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+......+... .++.+++++...++-.... ...+++.+..|+..+..+. ......+...+++.+++.
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~--~~~~la~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~ 114 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRH--LEAWYGIMGIGAICHTVNP-RLFPEQIAWIINHAEDRV 114 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH--HHHHHHHHhcCeEeecccc-ccCHHHHHHHHhccCCCE
Confidence 357888887666655543 4788999988887754432 3347788888988876654 668889999999999999
Q ss_pred eecchHHHHH
Q 014065 256 YTAVPTIHQI 265 (431)
Q Consensus 256 ~~~~p~~~~~ 265 (431)
++........
T Consensus 115 i~~~~~~~~~ 124 (542)
T PRK06018 115 VITDLTFVPI 124 (542)
T ss_pred EEEccccHHH
Confidence 8876654433
No 267
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=43.79 E-value=63 Score=22.35 Aligned_cols=33 Identities=21% Similarity=0.234 Sum_probs=23.3
Q ss_pred ceEEecCC-----CcccHHHHHH-HHHHHHHHHHHcCCC
Q 014065 21 RALSVSGK-----FDLTYSRIHE-LVERAASRLVAAGIN 53 (431)
Q Consensus 21 ~a~~~~~~-----~~~Ty~el~~-~~~~~a~~L~~~gl~ 53 (431)
+|+++.++ -+++-.|+.+ |+.+++..|.++|++
T Consensus 16 I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv~ 54 (86)
T PF09153_consen 16 IAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGVS 54 (86)
T ss_dssp EEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT--
T ss_pred EEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCce
Confidence 34555543 3566788888 999999999998763
No 268
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=43.62 E-value=64 Score=23.31 Aligned_cols=53 Identities=6% Similarity=-0.056 Sum_probs=38.8
Q ss_pred CcccHHHHHHHH----HHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 29 FDLTYSRIHELV----ERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 29 ~~~Ty~el~~~~----~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
..+.+.++.+.. ..+...+...+..+++.|.+++.++.....+...+..+|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 456677765432 35666666667778889999999988877777888888864
No 269
>PLN02574 4-coumarate--CoA ligase-like
Probab=43.60 E-value=2e+02 Score=28.56 Aligned_cols=84 Identities=13% Similarity=0.146 Sum_probs=61.6
Q ss_pred eechHHHHHHHHHHHH---H-hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 180 PLTQNNLAASVSNIKS---V-YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
.+|...+...+..+.. . .++.++|++....+-.. .+...+++++..|+..+..++ .....++...+++.++..
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l~p-~~~~~~l~~~l~~~~~~~ 142 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV--YFPVIFLAVLSLGGIVTTMNP-SSSLGEIKKRVVDCSVGL 142 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc--hHHHHHHHHHHhCeEEeCcCc-ccCHHHHHHHHHhcCCEE
Confidence 4678877665554433 3 67889999999887543 334447888889998886654 568888999999999998
Q ss_pred eecchHHHHHH
Q 014065 256 YTAVPTIHQIV 266 (431)
Q Consensus 256 ~~~~p~~~~~l 266 (431)
++..+.....+
T Consensus 143 ~~~~~~~~~~~ 153 (560)
T PLN02574 143 AFTSPENVEKL 153 (560)
T ss_pred EEECHHHHHHH
Confidence 88877665554
No 270
>PRK06382 threonine dehydratase; Provisional
Probab=43.40 E-value=1.9e+02 Score=27.41 Aligned_cols=53 Identities=11% Similarity=-0.059 Sum_probs=40.0
Q ss_pred CCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchh
Q 014065 62 FPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA 114 (431)
Q Consensus 62 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 114 (431)
...+-....+.++|.+.|..+..+=|...+......++..+++++++.....+
T Consensus 79 aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~ 131 (406)
T PRK06382 79 ASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDE 131 (406)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHH
Confidence 34455556677899999998777777766667777899999999998875433
No 271
>PRK13390 acyl-CoA synthetase; Provisional
Probab=43.25 E-value=3.2e+02 Score=26.50 Aligned_cols=79 Identities=14% Similarity=0.062 Sum_probs=58.3
Q ss_pred eechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+... .++.+++++....+-+. .+...+++++..|+..+..+. .+.+..+...+...+++.+
T Consensus 24 ~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~--~~~~~~la~~~~Ga~~~~l~~-~~~~~~~~~~~~~~~~~~~ 100 (501)
T PRK13390 24 QVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSP--EALVVLWAALRSGLYITAINH-HLTAPEADYIVGDSGARVL 100 (501)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH--HHHHHHHHHHHhCCEEecccc-CCCHHHHHHHHHhcCCcEE
Confidence 58888887776665544 47889999888877544 334458888999998876654 5688888888888888887
Q ss_pred ecchH
Q 014065 257 TAVPT 261 (431)
Q Consensus 257 ~~~p~ 261 (431)
.....
T Consensus 101 i~~~~ 105 (501)
T PRK13390 101 VASAA 105 (501)
T ss_pred EEcch
Confidence 66543
No 272
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=43.16 E-value=1.3e+02 Score=28.12 Aligned_cols=62 Identities=23% Similarity=0.303 Sum_probs=38.2
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHhcCCceEEE
Q 014065 42 RAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-----YTPDEFEFYLSDSESKLLL 107 (431)
Q Consensus 42 ~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii 107 (431)
.+...|...++++||.|.+-.+. +.....++...|+.++.++.+ .+.+.+...+.. +.++|+
T Consensus 60 al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 34445555678899987765543 333345566788877776532 356777777754 456665
No 273
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=43.14 E-value=3.3e+02 Score=26.73 Aligned_cols=80 Identities=14% Similarity=0.093 Sum_probs=57.7
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.+++++...++-.. .+...+++++..|+.++..++ ....+.+...++..+++.
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~ 128 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRW--EFTALYLACARIGAVLNPLMP-IFRERELSFMLNHADSKV 128 (538)
T ss_pred ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHhcCEEEeccCc-ccCHHHHHHHHHhcCCeE
Confidence 35788888766555444 447888999988877533 223347888889988876543 567888999999999988
Q ss_pred eecchH
Q 014065 256 YTAVPT 261 (431)
Q Consensus 256 ~~~~p~ 261 (431)
++..+.
T Consensus 129 li~~~~ 134 (538)
T TIGR03208 129 FVVPSV 134 (538)
T ss_pred EEEccc
Confidence 887553
No 274
>PRK12582 acyl-CoA synthetase; Provisional
Probab=41.93 E-value=1.5e+02 Score=29.90 Aligned_cols=79 Identities=11% Similarity=0.021 Sum_probs=56.4
Q ss_pred eeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCC-----hhhHHHHHHH
Q 014065 179 VPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFS-----ASTFWQDMIK 250 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~-----~~~~~~~i~~ 250 (431)
-.+|...+...+..+... .++.+++++...++-.. .+...+++++..|+..+..+. .+. ..++...+++
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~p-~~~~~~~~~~~l~~~l~~ 155 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI--EHALMTLAAMQAGVPAAPVSP-AYSLMSHDHAKLKHLFDL 155 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH--HHHHHHHHHHHcCCeEeeccC-ccccccCCHHHHHHHHHh
Confidence 468888887777665544 47889999999888433 344557888999998886553 233 3678888888
Q ss_pred hcceeeecch
Q 014065 251 YNATWYTAVP 260 (431)
Q Consensus 251 ~~~t~~~~~p 260 (431)
.+++.++...
T Consensus 156 ~~~~~vi~~~ 165 (624)
T PRK12582 156 VKPRVVFAQS 165 (624)
T ss_pred cCCcEEEecC
Confidence 8888777653
No 275
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=41.87 E-value=1.9e+02 Score=25.73 Aligned_cols=84 Identities=14% Similarity=0.064 Sum_probs=54.4
Q ss_pred ceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCC----CHHHHHH
Q 014065 21 RALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAY----TPDEFEF 96 (431)
Q Consensus 21 ~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~ 96 (431)
++++.+.+..+=.+=+ -|...+|..|++. |-.|..++......... .+...|..+..++... ..+++..
T Consensus 2 i~ir~Da~~~iG~GHv-~Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~ 74 (279)
T TIGR03590 2 ILFRADASSEIGLGHV-MRCLTLARALHAQ----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELIN 74 (279)
T ss_pred EEEEecCCccccccHH-HHHHHHHHHHHHC----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHH
Confidence 4555555444444443 3577889999775 44676766665444333 3357787777675432 2456888
Q ss_pred HHhcCCceEEEecCC
Q 014065 97 YLSDSESKLLLTPAE 111 (431)
Q Consensus 97 ~l~~~~~~~ii~~~~ 111 (431)
+++..+++++|+|.-
T Consensus 75 ~l~~~~~d~vV~D~y 89 (279)
T TIGR03590 75 LLEEEKFDILIVDHY 89 (279)
T ss_pred HHHhcCCCEEEEcCC
Confidence 999999999999975
No 276
>PLN02356 phosphateglycerate kinase
Probab=41.56 E-value=2.1e+02 Score=27.38 Aligned_cols=64 Identities=9% Similarity=-0.052 Sum_probs=45.8
Q ss_pred HHHHcCC-CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecC
Q 014065 46 RLVAAGI-NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 46 ~L~~~gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
.+.+.|. ++|..|+ ....+-.-+.+.++|...|..++.+=|.....+-...++..+++++.++.
T Consensus 94 ~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 94 EALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 3444443 4777655 33444457778888899998877776766666678899999999999853
No 277
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=41.07 E-value=3e+02 Score=30.37 Aligned_cols=96 Identities=9% Similarity=-0.001 Sum_probs=66.1
Q ss_pred cCCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc--HHHHHHHHHHHHhCcEEEecC
Q 014065 17 FSSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNT--VEFVIMFLAVIRARATAAPLN 86 (431)
Q Consensus 17 ~p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~ 86 (431)
.++.++++... +..+|.+.+...+...+.. .+++++|++...+|-. ..+....+..+..|...+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAAR---IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHh---hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 45566665432 1457888887766665544 3778999998887753 233355677788898888776
Q ss_pred CCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 87 AAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 87 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
.....+.+...+++.++..+...+.....
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~ 896 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNG 896 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHH
Confidence 55556677888899999999887654433
No 278
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.80 E-value=2.2e+02 Score=27.99 Aligned_cols=83 Identities=8% Similarity=-0.047 Sum_probs=60.0
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+......+.. ..++.+++++...+|-.. .....+++++..|+..+..++ ...+.++...+++.+++.+
T Consensus 39 ~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~--~~~~~~la~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~~ 115 (539)
T PRK07008 39 RYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGY--RHLEAYYGVSGSGAVCHTINP-RLFPEQIAYIVNHAEDRYV 115 (539)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccc-ccCHHHHHHHHhccCCcEE
Confidence 4688888666555443 457889999988887543 334447788888998886654 5688888889999999888
Q ss_pred ecchHHHHH
Q 014065 257 TAVPTIHQI 265 (431)
Q Consensus 257 ~~~p~~~~~ 265 (431)
...+.....
T Consensus 116 ~~~~~~~~~ 124 (539)
T PRK07008 116 LFDLTFLPL 124 (539)
T ss_pred EEcchhHHH
Confidence 777665443
No 279
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=40.41 E-value=2.2e+02 Score=31.82 Aligned_cols=96 Identities=15% Similarity=0.034 Sum_probs=66.9
Q ss_pred cCCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHH-HHHHHHHHHhCcEEEecCC
Q 014065 17 FSSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEF-VIMFLAVIRARATAAPLNA 87 (431)
Q Consensus 17 ~p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~ 87 (431)
.|+.+|++... +..+|.+.+...+.... ...+++++|++....+-+.+. +.-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 35666766432 24578887766554433 334889999999988876553 4456788889999887765
Q ss_pred C--CCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 88 A--YTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 88 ~--~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
. ...+.+...+++.++.++...+.....
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~ 702 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAA 702 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHH
Confidence 3 457778889999999988877654443
No 280
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=40.37 E-value=1.8e+02 Score=28.55 Aligned_cols=79 Identities=14% Similarity=0.168 Sum_probs=57.1
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++...++-.. .+...+++++..|+..+.... ......+...+++.+++.+
T Consensus 48 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~--~~~~~~la~~~~G~~~v~~~~-~~~~~~~~~~l~~~~~~~l 124 (527)
T TIGR02275 48 QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIA--EFYIVFFALLKLGIAPVLALF-SHRKSELTAYAQQIEPALY 124 (527)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH--HHHHHHHHHHHcCeEEecccc-ccCHHHHHHHHHhcCCcEE
Confidence 6788888766665444 457889999988876433 445558888899998775442 4577888888888888888
Q ss_pred ecchH
Q 014065 257 TAVPT 261 (431)
Q Consensus 257 ~~~p~ 261 (431)
...+.
T Consensus 125 i~~~~ 129 (527)
T TIGR02275 125 IIDRA 129 (527)
T ss_pred EEcCc
Confidence 76543
No 281
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=40.35 E-value=2.2e+02 Score=28.70 Aligned_cols=99 Identities=14% Similarity=0.039 Sum_probs=71.3
Q ss_pred HhcCCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHH-HHHHHhCcEEEec
Q 014065 15 DQFSSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMF-LAVIRARATAAPL 85 (431)
Q Consensus 15 ~~~p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~-lA~~~~G~~~v~l 85 (431)
...||..|.+... |.-+||+-+...+..+...+. -++++|++.-++|-..-+=-++ .++...+.+.+..
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~ 264 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLF 264 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEe
Confidence 4567888876542 366999999999998888775 3789999999999764443333 5555555555444
Q ss_pred CCCCCHHHHHHHHhcCCceEEEecCCchhHHH
Q 014065 86 NAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQ 117 (431)
Q Consensus 86 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 117 (431)
. .+.+.+..-+...+|.+++.-+...+.+.
T Consensus 265 ~--~~~~~~~~dl~~~rPt~m~~VPRvwE~i~ 294 (613)
T COG1022 265 K--EDPRTLLEDLKEVRPTVMIGVPRVWEKVY 294 (613)
T ss_pred c--CCHHHHHHHHHHhCCeEEeechHHHHHHH
Confidence 3 35778899999999999998877554444
No 282
>PRK10595 SOS cell division inhibitor; Provisional
Probab=40.09 E-value=1.5e+02 Score=23.91 Aligned_cols=66 Identities=15% Similarity=0.133 Sum_probs=38.0
Q ss_pred HHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecC--C-CCCHHH---HHHHHhcCCceEEEec
Q 014065 44 ASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLN--A-AYTPDE---FEFYLSDSESKLLLTP 109 (431)
Q Consensus 44 a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~-~~~~~~---l~~~l~~~~~~~ii~~ 109 (431)
+.+|.+.|+..+..+.|...+..+.+.++==|++.|..-+.+- | ..+.+. |...-+..++-.++.-
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~R 141 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIMR 141 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEEe
Confidence 4566677777666666666666777777777777775333332 3 555443 3334455555555543
No 283
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.06 E-value=2.1e+02 Score=28.34 Aligned_cols=82 Identities=13% Similarity=0.167 Sum_probs=59.9
Q ss_pred eechHHHHHHHHHHHHH----hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 180 PLTQNNLAASVSNIKSV----YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
.+|...+......+... .++.+++++....+-. ..+...+++++..|...+..++ ......+...+++.+++.
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~-~~~~~~~~~~l~~~~~~~ 124 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNL--LQYPIALFGILRAGMIVVNVNP-LYTPRELEHQLNDSGAKA 124 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCC--HHHHHHHHHHHHcCcEEeccCc-cCCHHHHHHHHHhcCceE
Confidence 56888877666655443 4678889988887643 3344558888999999987654 567888999999999999
Q ss_pred eecchHHHH
Q 014065 256 YTAVPTIHQ 264 (431)
Q Consensus 256 ~~~~p~~~~ 264 (431)
+...+...+
T Consensus 125 ii~~~~~~~ 133 (560)
T PRK08974 125 IVIVSNFAH 133 (560)
T ss_pred EEEeccccH
Confidence 887665433
No 284
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=39.98 E-value=2.4e+02 Score=30.94 Aligned_cols=94 Identities=10% Similarity=0.053 Sum_probs=66.8
Q ss_pred CCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc--HHHHHHHHHHHHhCcEEEecCC
Q 014065 18 SSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNT--VEFVIMFLAVIRARATAAPLNA 87 (431)
Q Consensus 18 p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~ 87 (431)
++.+|++... +..+|.+.+...+...... .++.++|++...+|-. ..+....++.+..|+..+..+.
T Consensus 781 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~ 857 (1146)
T PRK08633 781 PDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV---FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPD 857 (1146)
T ss_pred CCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh---cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCC
Confidence 5667766432 2467888887766655433 3678899887777653 2333446777888988887776
Q ss_pred CCCHHHHHHHHhcCCceEEEecCCchh
Q 014065 88 AYTPDEFEFYLSDSESKLLLTPAEGNA 114 (431)
Q Consensus 88 ~~~~~~l~~~l~~~~~~~ii~~~~~~~ 114 (431)
..+.+.+...+++.++..+...+....
T Consensus 858 ~~~~~~~~~~i~~~~~t~~~~~P~~~~ 884 (1146)
T PRK08633 858 PTDALGIAKLVAKHRATILLGTPTFLR 884 (1146)
T ss_pred CCCHHHHHHHHHHcCCeEEEecHHHHH
Confidence 678888999999999999998776543
No 285
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=39.91 E-value=2.3e+02 Score=25.96 Aligned_cols=61 Identities=11% Similarity=0.030 Sum_probs=50.1
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 51 GINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
-+.||..+.+=...+---+...|.|..-|..++.+=|..-..+-..+|+..++.+|.++..
T Consensus 99 ~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 99 LITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred CccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 4688888877777777778888888889988887777766677788999999999999875
No 286
>PRK07787 acyl-CoA synthetase; Validated
Probab=39.75 E-value=2e+02 Score=27.67 Aligned_cols=76 Identities=9% Similarity=0.105 Sum_probs=57.8
Q ss_pred eechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecc
Q 014065 180 PLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAV 259 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 259 (431)
.+|...+...+..+...+. +.+++...++-. ..+...+++.+..|...+..+. ......+...+++.+++.+...
T Consensus 25 ~~Ty~el~~~~~~~a~~L~--~~~~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~il~~ 99 (471)
T PRK07787 25 VLSRSDLAGAATAVAERVA--GARRVAVLATPT--LATVLAVVGALIAGVPVVPVPP-DSGVAERRHILADSGAQAWLGP 99 (471)
T ss_pred EEEHHHHHHHHHHHHHHhc--cCCEEEEECCCC--HHHHHHHHHHHhcCcEEeecCC-CCChHHHHHHHHhcCCCEEEec
Confidence 5788888887777776654 567777776643 3455558889999999887654 6688899999999999888876
Q ss_pred h
Q 014065 260 P 260 (431)
Q Consensus 260 p 260 (431)
+
T Consensus 100 ~ 100 (471)
T PRK07787 100 A 100 (471)
T ss_pred C
Confidence 5
No 287
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=39.40 E-value=1.5e+02 Score=29.27 Aligned_cols=77 Identities=17% Similarity=0.080 Sum_probs=57.4
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--cHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEE
Q 014065 30 DLTYSRIHELVERAASRLVAAGINAGDVVALTFPN--TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLL 107 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 107 (431)
-||+......+.-+... .|+++.|+|-+.+|- +...++-+-+|+..|++++ +....|+...-.-..+.++.++-
T Consensus 261 vith~r~~~~a~g~~~~---~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~Q 336 (649)
T KOG1179|consen 261 VITHLRYLQGAAGFYYV---FGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQ 336 (649)
T ss_pred HHHHHHHHHHHHHHHHH---hCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeee
Confidence 36665555444333333 499999999999885 7888999999999999976 77888888877777778877765
Q ss_pred ecC
Q 014065 108 TPA 110 (431)
Q Consensus 108 ~~~ 110 (431)
.-.
T Consensus 337 YIG 339 (649)
T KOG1179|consen 337 YIG 339 (649)
T ss_pred hHH
Confidence 433
No 288
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=38.54 E-value=1.5e+02 Score=26.97 Aligned_cols=58 Identities=10% Similarity=-0.133 Sum_probs=40.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch
Q 014065 55 GDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN 113 (431)
Q Consensus 55 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 113 (431)
++.|... ..+-.-..+.++|...|..+..+-|..........++..++++++++....
T Consensus 70 ~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~~ 127 (324)
T cd01563 70 VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNFD 127 (324)
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCcHH
Confidence 4455444 334444555688889998777766655566678888999999999987533
No 289
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=38.39 E-value=1.9e+02 Score=27.87 Aligned_cols=55 Identities=13% Similarity=0.149 Sum_probs=35.6
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHhcCCceEEEec
Q 014065 51 GINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-----YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 109 (431)
++++||.|.+-.+.. .....++...|+.+++++.+ .+.+.+...+.. +.++|++.
T Consensus 107 ~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 788999887665544 33445666778887776532 356677777653 45666654
No 290
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=37.39 E-value=2.2e+02 Score=27.57 Aligned_cols=78 Identities=18% Similarity=0.138 Sum_probs=56.2
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..+..+++++....+-.. .....+++++..|+..+..+. ......+...++..+++.+
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~--~~~~~~~a~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 103 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSP--EMLATFLGAVKAGHAYIPVDV-SSPAERIEMIIEVAKPSLI 103 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEecCCC-CChHHHHHHHHHhcCCCEE
Confidence 4788888776665543 446778898888877443 334457888888998876653 5677888888888888888
Q ss_pred ecch
Q 014065 257 TAVP 260 (431)
Q Consensus 257 ~~~p 260 (431)
+...
T Consensus 104 ~~~~ 107 (503)
T PRK04813 104 IATE 107 (503)
T ss_pred Eecc
Confidence 7654
No 291
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=37.30 E-value=2.2e+02 Score=28.23 Aligned_cols=81 Identities=14% Similarity=0.189 Sum_probs=58.7
Q ss_pred eechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+... .++..++++...++-... +...+++++..|+..+..++ .+....+...+++.+++.+
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~vpi~p-~~~~~~l~~~l~~~~~~~i 125 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQ--AVIGYYGTLLAGGIVVQTNP-LYTERELEYQLHDSGAKVI 125 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH--HHHHHHHHHHcCeEEeccCc-ccCHHHHHHHHhccCCeEE
Confidence 47888887666655443 467888999888876443 34447888888877776543 5678889899999999998
Q ss_pred ecchHHH
Q 014065 257 TAVPTIH 263 (431)
Q Consensus 257 ~~~p~~~ 263 (431)
+..+...
T Consensus 126 i~~~~~~ 132 (563)
T PRK06710 126 LCLDLVF 132 (563)
T ss_pred EEeccch
Confidence 8776443
No 292
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=37.03 E-value=1.7e+02 Score=27.44 Aligned_cols=56 Identities=14% Similarity=0.008 Sum_probs=46.1
Q ss_pred EEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchh
Q 014065 57 VVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA 114 (431)
Q Consensus 57 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 114 (431)
.|+--..| ....+.+|+.++|+.+..+=|...+....+.++..++.+++....+.+
T Consensus 117 ViasSaGN--ha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~de 172 (457)
T KOG1250|consen 117 VIASSAGN--HAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWDE 172 (457)
T ss_pred eEEecCcc--HHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHHH
Confidence 45555555 466788999999999988889999999999999999999998877543
No 293
>PRK05973 replicative DNA helicase; Provisional
Probab=36.55 E-value=1.8e+02 Score=25.16 Aligned_cols=88 Identities=17% Similarity=0.193 Sum_probs=53.2
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHH--HHHHHHHcCCCCCCEEEEECCCc--HHHHHHHHH--HH
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVER--AASRLVAAGINAGDVVALTFPNT--VEFVIMFLA--VI 76 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~--~a~~L~~~gl~~gd~V~i~~~n~--~~~~~~~lA--~~ 76 (431)
+.++.+.|++.|...+ --+|.-|...+.+ -+..|.. |+.+|+.+.|..+++ -..+...++ .+
T Consensus 22 ~~~~~~~~~~~a~~~g-----------~~~w~~~~~~~~~~~p~~~l~G-Gl~~Gsl~LIaG~PG~GKT~lalqfa~~~a 89 (237)
T PRK05973 22 NIPLHEALDRIAAEEG-----------FSSWSLLAAKAAATTPAEELFS-QLKPGDLVLLGARPGHGKTLLGLELAVEAM 89 (237)
T ss_pred CCcHHHHHHHHHHHhc-----------cchHHHHHHhccCCCCHHHhcC-CCCCCCEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4556666666555432 2234444444333 2444433 899999999999985 334443333 33
Q ss_pred HhCcEEEecCCCCCHHHHHHHHhcCC
Q 014065 77 RARATAAPLNAAYTPDEFEFYLSDSE 102 (431)
Q Consensus 77 ~~G~~~v~l~~~~~~~~l~~~l~~~~ 102 (431)
+.|-..+.+.-..+.+++...+...+
T Consensus 90 ~~Ge~vlyfSlEes~~~i~~R~~s~g 115 (237)
T PRK05973 90 KSGRTGVFFTLEYTEQDVRDRLRALG 115 (237)
T ss_pred hcCCeEEEEEEeCCHHHHHHHHHHcC
Confidence 45877777888888888777776654
No 294
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=36.54 E-value=30 Score=22.08 Aligned_cols=21 Identities=33% Similarity=0.610 Sum_probs=15.7
Q ss_pred cCceEEEcCCCeEEEeccccc
Q 014065 391 TGDIGYFDSDGYLHLVGRIKE 411 (431)
Q Consensus 391 TGD~~~~~~~g~l~~~gR~~d 411 (431)
-|.+.+.++||.+.+.|+.=|
T Consensus 32 ~~~i~Y~~~dg~yli~G~l~d 52 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQLYD 52 (57)
T ss_dssp TTEEEEEETTSSEEEES-EEE
T ss_pred CCeEEEEcCCCCEEEEeEEEe
Confidence 466888899999888887644
No 295
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=36.12 E-value=1.2e+02 Score=27.05 Aligned_cols=55 Identities=15% Similarity=0.215 Sum_probs=44.0
Q ss_pred CcccHHHHHHH-----HH-HHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 29 FDLTYSRIHEL-----VE-RAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 29 ~~~Ty~el~~~-----~~-~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
..+.|.++.+. .. .+...+...|+.+.+.|.++|..+......+||+-.+|....
T Consensus 202 iNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 202 INIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred cCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 67889988872 22 333333367999999999999999999999999999997654
No 296
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=36.09 E-value=1.2e+02 Score=31.05 Aligned_cols=59 Identities=10% Similarity=0.075 Sum_probs=42.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCC---------C-----HHHHHHHHhcC-Cce----EEEecCCc
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAY---------T-----PDEFEFYLSDS-ESK----LLLTPAEG 112 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~ii~~~~~ 112 (431)
+++||.|+ +-.|+--++.- |+..+|++++.+.|.. + .+.++..++.. +++ ++|+.+..
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY 308 (714)
T PRK15400 232 APAGSTVL-IDRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308 (714)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC
Confidence 57899655 77887777555 9999999999998775 3 56777777654 333 77777653
Q ss_pred h
Q 014065 113 N 113 (431)
Q Consensus 113 ~ 113 (431)
.
T Consensus 309 d 309 (714)
T PRK15400 309 D 309 (714)
T ss_pred c
Confidence 3
No 297
>PRK05939 hypothetical protein; Provisional
Probab=35.63 E-value=3.9e+02 Score=25.28 Aligned_cols=56 Identities=9% Similarity=0.074 Sum_probs=27.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+++||.|.+.-+.-......+-++-+.|+.+..++.. ..+.++..+.. +.++|++.
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~ve 138 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFVE 138 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEEE
Confidence 5677766554322111112222344567666666543 45556665543 45555543
No 298
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=35.59 E-value=2.7e+02 Score=26.58 Aligned_cols=79 Identities=13% Similarity=0.077 Sum_probs=57.8
Q ss_pred eechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|+..+...+..+... .++.+++++....+-... ....+++++..|...+..++ ......+...+++.++..+
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~--~~~~~la~~~~G~~~v~~~~-~~~~~~~~~~~~~~~~~~~ 104 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPE--TLLAYLALLQCGARVLPLNP-QLPQPLLEELLPSLTLDFA 104 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHH--HHHHHHHHHHcCCEEeecCC-CCCHHHHHHHHHhcCCCEE
Confidence 57888888777665544 468889998888765432 23447888899999987664 5677888888888888887
Q ss_pred ecchH
Q 014065 257 TAVPT 261 (431)
Q Consensus 257 ~~~p~ 261 (431)
.....
T Consensus 105 i~~~~ 109 (458)
T PRK09029 105 LVLEG 109 (458)
T ss_pred EEcCc
Confidence 76543
No 299
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=34.77 E-value=2.7e+02 Score=27.42 Aligned_cols=84 Identities=11% Similarity=-0.016 Sum_probs=59.5
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHH---HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEF---VIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~---~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
..+|.+.+...+...... .++.++|++...+|-...+ ....++++..|+..+... ..+.......+++.++.+
T Consensus 200 V~~s~~~l~~~~~~~~~~---~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVEI---CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAP-DPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHHHh---cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECC-CCCHHHHHHHHHHhCCcE
Confidence 467888888876655443 4788999988887764332 224688889999887654 446667778899999999
Q ss_pred EEecCCchhHH
Q 014065 106 LLTPAEGNAAA 116 (431)
Q Consensus 106 ii~~~~~~~~~ 116 (431)
+...+.....+
T Consensus 276 ~~~~p~~~~~l 286 (536)
T PRK10946 276 TALVPPAVSLW 286 (536)
T ss_pred EEeChHHHHHH
Confidence 88877644443
No 300
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=34.77 E-value=2.1e+02 Score=27.13 Aligned_cols=58 Identities=5% Similarity=-0.216 Sum_probs=44.7
Q ss_pred EEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 58 VALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 58 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
-.+....+-.-+.+.++|...|..++.+=|......-...++..+++++.++....+.
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a 193 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKA 193 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHH
Confidence 3455555677778888999999987777777777778888999999999998654433
No 301
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=34.72 E-value=2.2e+02 Score=28.70 Aligned_cols=79 Identities=14% Similarity=0.010 Sum_probs=57.2
Q ss_pred eeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCC-----hhhHHHHHHH
Q 014065 179 VPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFS-----ASTFWQDMIK 250 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~-----~~~~~~~i~~ 250 (431)
..+|...+...+..+... .++.+++++...++-.. .+...+++++..|++++..+. .+. ..++...+++
T Consensus 68 ~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~--e~~~~~lA~~~~Gav~vpl~~-~~~~~~~~~~~l~~~l~~ 144 (614)
T PRK08180 68 RRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSI--EHALLALAAMYAGVPYAPVSP-AYSLVSQDFGKLRHVLEL 144 (614)
T ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH--HHHHHHHHHHHcCCeEeeecc-ccccccCCHHHHHHHHhc
Confidence 467888888777665544 47889999988887544 334458888999999986653 333 5778888888
Q ss_pred hcceeeecch
Q 014065 251 YNATWYTAVP 260 (431)
Q Consensus 251 ~~~t~~~~~p 260 (431)
.++..++...
T Consensus 145 ~~~~~li~~~ 154 (614)
T PRK08180 145 LTPGLVFADD 154 (614)
T ss_pred CCCcEEEEcC
Confidence 8888877653
No 302
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=34.55 E-value=2.7e+02 Score=23.22 Aligned_cols=112 Identities=10% Similarity=-0.064 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhcCCCCCeEEEecCh--hhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecch-
Q 014065 184 NNLAASVSNIKSVYKLTESDSTVIVLPL--FHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVP- 260 (431)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p- 260 (431)
+..+..+.............+++...+. .|..|........-..|-.++.... ..+++++.+.+.+++++.+.++-
T Consensus 64 ~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~-~~p~~~l~~~~~~~~~d~v~lS~~ 142 (201)
T cd02070 64 KAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGR-DVPPEEFVEAVKEHKPDILGLSAL 142 (201)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCC-CCCHHHHHHHHHHcCCCEEEEecc
Q ss_pred -----HHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHH
Q 014065 261 -----TIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRL 299 (431)
Q Consensus 261 -----~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~ 299 (431)
..+..+.+...... ...--.++.||..++++..+.+
T Consensus 143 ~~~~~~~~~~~i~~lr~~~---~~~~~~i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 143 MTTTMGGMKEVIEALKEAG---LRDKVKVMVGGAPVNQEFADEI 183 (201)
T ss_pred ccccHHHHHHHHHHHHHCC---CCcCCeEEEECCcCCHHHHHHc
No 303
>PRK08813 threonine dehydratase; Provisional
Probab=34.51 E-value=3.8e+02 Score=24.85 Aligned_cols=57 Identities=7% Similarity=-0.107 Sum_probs=41.8
Q ss_pred EEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 59 ALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 59 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
.+....+-.-..+.++|...|..+..+=|..........++..+++++.+.....+.
T Consensus 84 VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~~~~a 140 (349)
T PRK08813 84 VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNSYDEA 140 (349)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 345555667777888999999877766566566667777899999999997654433
No 304
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=34.48 E-value=4e+02 Score=25.07 Aligned_cols=102 Identities=12% Similarity=0.069 Sum_probs=61.9
Q ss_pred cHHHHHHHHHHhcCCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCC--CCEEEEECCCcH--HHHHHH
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINA--GDVVALTFPNTV--EFVIMF 72 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~--gd~V~i~~~n~~--~~~~~~ 72 (431)
++.+.++-..+.+-+..+++... +..+|++.+...+..++..+ ++.+ .|++..++|-.. .+...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~~~ 157 (386)
T TIGR02372 81 RIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLFSC 157 (386)
T ss_pred cHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHHHH
Confidence 45566665555665666665432 25689999998888777765 4433 456777777653 344556
Q ss_pred HHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 73 LAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 73 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
+..+..|+..+.... .+...+...++.. .+++..+..
T Consensus 158 l~~l~~G~~vv~~~~-~~~~~~l~~i~~~--t~~~~~P~~ 194 (386)
T TIGR02372 158 LLPSRRGLEAKQLAA-APASGIMRHARPG--DLIVGTPFI 194 (386)
T ss_pred HHHHHCCCeEEecCC-CChHHHHHhhccC--CEEEECcHH
Confidence 777788998876653 4554444444432 455555543
No 305
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=34.47 E-value=1.7e+02 Score=28.31 Aligned_cols=66 Identities=17% Similarity=0.284 Sum_probs=49.2
Q ss_pred HHHcCCCCCCEEEEECCC-cHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 47 LVAAGINAGDVVALTFPN-TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 47 L~~~gl~~gd~V~i~~~n-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
+.-.|..|.-.|...-|. +...+.+=|-=+..-++.+|++.++.-+++..++...+|+++++.+..
T Consensus 410 ~e~~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeay 476 (653)
T KOG1138|consen 410 LECWGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAY 476 (653)
T ss_pred HHHhcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhh
Confidence 333466666666666553 555555556666677888999999999999999999999999998763
No 306
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=34.47 E-value=1.1e+02 Score=25.34 Aligned_cols=41 Identities=17% Similarity=0.107 Sum_probs=28.1
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCC-CCCEEEEECCCcHHHHH
Q 014065 29 FDLTYSRIHELVERAASRLVAAGIN-AGDVVALTFPNTVEFVI 70 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~-~gd~V~i~~~n~~~~~~ 70 (431)
.-+||.|+.+++.++|..+.+. .+ ..+.|+-++.-+..+..
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~-~~~~~~vivgi~~Gg~~fa~ 51 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD-YAGKSPVVLGVATGAFMFLA 51 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH-cCCCCcEEEEEccCCHHHHH
Confidence 4689999999999999999885 22 23444444444544433
No 307
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=34.47 E-value=3e+02 Score=26.68 Aligned_cols=79 Identities=13% Similarity=0.091 Sum_probs=57.5
Q ss_pred eechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+... .++.+++++....+.... ....+++++..|...+..+. ......+...+++.+++.+
T Consensus 25 ~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~v~~~~-~~~~~~~~~~~~~~~~~~i 101 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPH--MLVAFLGSIKSGHAYIPVDT-SIPSERIEMIIEAAGPELV 101 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHH--HHHHHHHHHHhCCEEeCCCC-cChHHHHHHHHHhcCCCEE
Confidence 58888887666655443 467788888877775433 23447888999998876654 5677888899999999888
Q ss_pred ecchH
Q 014065 257 TAVPT 261 (431)
Q Consensus 257 ~~~p~ 261 (431)
+....
T Consensus 102 i~~~~ 106 (502)
T TIGR01734 102 IHTAE 106 (502)
T ss_pred Eeccc
Confidence 87654
No 308
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=34.42 E-value=2.3e+02 Score=25.42 Aligned_cols=55 Identities=9% Similarity=-0.103 Sum_probs=40.6
Q ss_pred CEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 56 DVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 56 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
+.|+.. ..+-.-..+.++|.+.|..++.+-|..........++..++++++++..
T Consensus 66 ~~iv~~-ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~ 120 (304)
T cd01562 66 KGVVAA-SAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGED 120 (304)
T ss_pred CcEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 444443 4566777777888889987766666655666778899999999999875
No 309
>PRK05638 threonine synthase; Validated
Probab=34.11 E-value=1.8e+02 Score=27.95 Aligned_cols=59 Identities=8% Similarity=-0.092 Sum_probs=40.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 56 DVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 56 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
+.|+. ...+-.-..+...|.++|..+..+-|......-...++..+++++.++....+.
T Consensus 113 ~~vv~-aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~~~~~~~ 171 (442)
T PRK05638 113 NGFIV-ASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYGESVDEA 171 (442)
T ss_pred CEEEE-eCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEECCCHHHH
Confidence 34444 455566666667777889876666665555666778999999999998654433
No 310
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=34.05 E-value=2.9e+02 Score=26.31 Aligned_cols=62 Identities=18% Similarity=0.254 Sum_probs=43.1
Q ss_pred CCCCCCEEEEECCCcH--H--HHHHHH--HHHHhCcEE---EecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 51 GINAGDVVALTFPNTV--E--FVIMFL--AVIRARATA---APLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~--~--~~~~~l--A~~~~G~~~---v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
.+++||.|.+..+..+ + ....++ .+.+.|+.. +-.+-+.+.+++..+++..+|+.+|--...
T Consensus 315 ~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~SgHa~~~dl~~~i~~~~Pk~~ipvHge 385 (422)
T TIGR00649 315 RIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVSGHASQEDHKLLLRLLKPKYIIPVHGE 385 (422)
T ss_pred EeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEecCCCCHHHHHHHHHHhCCCEEEecCCc
Confidence 4568999999885543 3 122223 366788854 345667788999999999999988855443
No 311
>PRK09192 acyl-CoA synthetase; Validated
Probab=33.97 E-value=4e+02 Score=26.52 Aligned_cols=87 Identities=10% Similarity=0.022 Sum_probs=60.9
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-CC-----ChhhHHHHHH
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG-RF-----SASTFWQDMI 249 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~-----~~~~~~~~i~ 249 (431)
-.+|...+...+..+.. ..++.+++++...++..- .+...+++++..|+..+..+.. .+ ..+.+...++
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~ 125 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDG--DFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLA 125 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCch--hHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHH
Confidence 46788888766555444 457899999998888633 3344478889999988876421 11 1577888999
Q ss_pred HhcceeeecchHHHHHHH
Q 014065 250 KYNATWYTAVPTIHQIVL 267 (431)
Q Consensus 250 ~~~~t~~~~~p~~~~~l~ 267 (431)
+.+++.++........+.
T Consensus 126 ~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 126 SAQPAAIITPDELLPWVN 143 (579)
T ss_pred hcCCCEEEeChHHHHHHH
Confidence 999999888776655443
No 312
>PRK06721 threonine synthase; Reviewed
Probab=33.36 E-value=2.3e+02 Score=26.22 Aligned_cols=51 Identities=2% Similarity=-0.240 Sum_probs=36.5
Q ss_pred CCCcHHHHHHHHHHHHhCcEEEecCCCC-CHHHHHHHHhcCCceEEEecCCc
Q 014065 62 FPNTVEFVIMFLAVIRARATAAPLNAAY-TPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 62 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
...+-.-..+.++|.+.|..++.+-|.. ....-...++..++++++++...
T Consensus 81 aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~~ 132 (352)
T PRK06721 81 ASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGNF 132 (352)
T ss_pred ECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 3445555677778889998777776654 34455667889999999998653
No 313
>PHA02885 putative interleukin binding protein; Provisional
Probab=32.90 E-value=1.6e+02 Score=21.29 Aligned_cols=39 Identities=21% Similarity=0.206 Sum_probs=27.4
Q ss_pred CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 386 FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 386 ~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
++...+|-+- .+||++|..|...- .-|+.|.++.+|-|.
T Consensus 48 ~rllcs~~ln--sedgyiywi~pnnt---spgeyif~enl~g~~ 86 (135)
T PHA02885 48 DRLLCSGCLN--SEDGYIYWIGPNNT---SPGEYIFIENLEGAN 86 (135)
T ss_pred hhheeeeeec--CCCceEEEEeCCCC---CCcceeeeecccccc
Confidence 3456665432 37899998887543 568999999888775
No 314
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=32.60 E-value=1.6e+02 Score=22.79 Aligned_cols=54 Identities=22% Similarity=0.153 Sum_probs=35.6
Q ss_pred cHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEC--CCcHHHHHHHHHHHHhCcEEEec
Q 014065 32 TYSRIHELVERAASRLVAA-GINAGDVVALTF--PNTVEFVIMFLAVIRARATAAPL 85 (431)
Q Consensus 32 Ty~el~~~~~~~a~~L~~~-gl~~gd~V~i~~--~n~~~~~~~~lA~~~~G~~~v~l 85 (431)
+...-.++-..++..+.+. .++|||.+.++. .|++..+-+...+-..|+..+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 80 AISNDLEYDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp HHHHHTTGGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred hhhcccchhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 4444555556677777664 689999877775 45788888999999999887754
No 315
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=32.56 E-value=1.7e+02 Score=25.63 Aligned_cols=54 Identities=9% Similarity=0.087 Sum_probs=41.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHhCcE---EEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 55 GDVVALTFPNTVEFVIMFLAVIRARAT---AAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 55 gd~V~i~~~n~~~~~~~~lA~~~~G~~---~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
+.++.+..-+..+.+. .|..+|.. .+.+.+..+.+.=..++++.+++++++=++
T Consensus 150 ~~~~~~RvLP~~~~l~---~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~S 206 (256)
T TIGR00715 150 EAVVFVRVLPYPQALA---QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKAS 206 (256)
T ss_pred CceEEEEECCCchhhH---HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCC
Confidence 4555555555656554 67777764 777888889888899999999999999776
No 316
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=32.32 E-value=4.5e+02 Score=25.01 Aligned_cols=60 Identities=22% Similarity=0.200 Sum_probs=48.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCcEEEec--CCCCCHHHHHHHHhcCCceEEEecCCch
Q 014065 54 AGDVVALTFPNTVEFVIMFLAVIRARATAAPL--NAAYTPDEFEFYLSDSESKLLLTPAEGN 113 (431)
Q Consensus 54 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 113 (431)
+|-+|+.+++-.+...+.+..+...|+.+... +|....++....|...+..+.-...+..
T Consensus 31 ~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~~ 92 (406)
T TIGR00936 31 KGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGETN 92 (406)
T ss_pred CCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCCH
Confidence 67899999999999999999999999976655 7777788888888888888665444433
No 317
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=32.31 E-value=3e+02 Score=27.05 Aligned_cols=78 Identities=14% Similarity=0.071 Sum_probs=56.7
Q ss_pred eechHHHHHHHHHHH---HHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIK---SVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+. ...++.+++++...++-... ....+++.+..|+.++.... ......+...+++.+++.+
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~--~~~~~la~~~~G~~~v~l~~-~~~~~~l~~~i~~~~~~~v 122 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPD--HPINFFGALKAGARVVHLSP-LDGERALSHKLSDSGARLL 122 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH--HHHHHHHHHhcCeEEEecCC-CCCHHHHHHHHhhcCceEE
Confidence 578888766555444 44578899999888885432 23447788888988886554 5678889999999999988
Q ss_pred ecch
Q 014065 257 TAVP 260 (431)
Q Consensus 257 ~~~p 260 (431)
+...
T Consensus 123 i~~~ 126 (541)
T TIGR03205 123 ITSD 126 (541)
T ss_pred EEeC
Confidence 7653
No 318
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=31.90 E-value=4.4e+02 Score=24.78 Aligned_cols=56 Identities=13% Similarity=0.182 Sum_probs=28.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+++||.|++..+.-....-.+-.+...|+.+..++++ .+.+...++..+.++|++.
T Consensus 89 l~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~d--~~~l~~~i~~~~tklV~ie 144 (385)
T PRK08574 89 LKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYPS--TEDIIEAIKEGRTKLVFIE 144 (385)
T ss_pred hCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECCC--HHHHHHhcCccCceEEEEE
Confidence 5677777665444333222222224456655544443 4556666654455666653
No 319
>PRK08246 threonine dehydratase; Provisional
Probab=31.69 E-value=3.9e+02 Score=24.17 Aligned_cols=58 Identities=12% Similarity=-0.008 Sum_probs=42.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 54 AGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 54 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
+++.|... ..+-.-..+.++|.+.|..+..+=|....+.....++..++++++++...
T Consensus 67 ~~~~vv~a-SsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~ 124 (310)
T PRK08246 67 PAAGVVAA-SGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEY 124 (310)
T ss_pred cCCeEEEe-CCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCH
Confidence 45555444 44666777778888999877777666666667889999999999998653
No 320
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=31.54 E-value=4.1e+02 Score=25.73 Aligned_cols=62 Identities=16% Similarity=0.276 Sum_probs=43.4
Q ss_pred cHHHHHHHHHHhc-----CCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH
Q 014065 5 TLIGLLNQVIDQF-----SSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE 67 (431)
Q Consensus 5 tl~~~l~~~a~~~-----p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~ 67 (431)
.+.+.+.+...++ -+..|+...+....+|+++.+-++.++.++.+. .+++....+++.+..-
T Consensus 355 ~l~~~i~~~l~~f~~~~~~~~~alal~g~~~~~y~~iq~la~~i~~~~~~~-~~~~~Pliiv~e~D~a 421 (475)
T PRK10719 355 DLVAAIQQALAWFDLDPETDAYALALPGSLPPSYAAIQTLAKALVDGVARF-PNKPHPLIVVAEQDMG 421 (475)
T ss_pred hHHHHHHHHHHHhhccCCcCcEEEEcCCCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEEcccHH
Confidence 4445555544443 244666667778999999999999999999885 4456677777777644
No 321
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=31.03 E-value=67 Score=27.65 Aligned_cols=42 Identities=21% Similarity=0.520 Sum_probs=26.0
Q ss_pred CCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEE---------c-CCCeEEEeccccc
Q 014065 356 GGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYF---------D-SDGYLHLVGRIKE 411 (431)
Q Consensus 356 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~---------~-~~g~l~~~gR~~d 411 (431)
+|.++|||+.- || .++.||..+.+.||. + ..|.+||+.+..|
T Consensus 172 PgiiaELC~SD---------DP-----~YtTGYVA~~~~GY~RI~~mK~~G~~~GGRvffv~~~~d 223 (239)
T PF03744_consen 172 PGIIAELCWSD---------DP-----DYTTGYVASKKFGYHRITNMKEAGSPKGGRVFFVDGSID 223 (239)
T ss_pred CcceEEEEecC---------CC-----CCceEEEEeCCcceEECccccccCCCCCCEEEEEeCCCC
Confidence 36679999954 11 234566777777665 1 2467777776544
No 322
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=30.93 E-value=2.5e+02 Score=26.91 Aligned_cols=58 Identities=5% Similarity=-0.221 Sum_probs=44.4
Q ss_pred EEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 58 VALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 58 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
-.+....+-.-+.+.++|.+.|..++.+=|......-...++..+++++++.....+.
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a 211 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVA 211 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 3444555666777788888999877777677677778889999999999998765444
No 323
>PRK06145 acyl-CoA synthetase; Validated
Probab=30.76 E-value=3.4e+02 Score=26.19 Aligned_cols=80 Identities=9% Similarity=0.030 Sum_probs=56.7
Q ss_pred eechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+... .++.+++++...++-.- .+...+++++..|...+..+. ......+...+++.+++.+
T Consensus 27 ~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~--~~~~~~la~~~~G~~~v~l~~-~~~~~~~~~~l~~~~~~~~ 103 (497)
T PRK06145 27 EISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSA--AFLELAFAASYLGAVFLPINY-RLAADEVAYILGDAGAKLL 103 (497)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHhcCcEEEeccc-ccCHHHHHHHHHhcCCcEE
Confidence 46778877666655443 46788888888876432 334447888999988876654 5678888888888888887
Q ss_pred ecchHH
Q 014065 257 TAVPTI 262 (431)
Q Consensus 257 ~~~p~~ 262 (431)
...+..
T Consensus 104 i~~~~~ 109 (497)
T PRK06145 104 LVDEEF 109 (497)
T ss_pred EEccch
Confidence 765544
No 324
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=30.53 E-value=1.6e+02 Score=19.26 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=25.9
Q ss_pred eeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCeEEEec
Q 014065 360 GEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVG 407 (431)
Q Consensus 360 Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~g 407 (431)
|.+|++-.+- ..|-|+..||...+...+.+++.+
T Consensus 25 G~vWlT~~g~--------------~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREGD--------------PDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCCC--------------CCCEEECCCCEEEeCCCCEEEEEe
Confidence 8999986431 123489999999998888888765
No 325
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=30.39 E-value=3.4e+02 Score=25.38 Aligned_cols=54 Identities=7% Similarity=-0.068 Sum_probs=41.1
Q ss_pred EECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch
Q 014065 60 LTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN 113 (431)
Q Consensus 60 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 113 (431)
+....+-....+.++|.+.|..+..+=|...+..-...++..+++++++.....
T Consensus 52 v~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 105 (380)
T TIGR01127 52 VAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVILHGDDYD 105 (380)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHHHHHCCCEEEEECCCHH
Confidence 333445566777788999998877777777777778889999999999876533
No 326
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=30.36 E-value=1.5e+02 Score=23.59 Aligned_cols=41 Identities=17% Similarity=0.219 Sum_probs=29.0
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHH
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIM 71 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~ 71 (431)
.-+||.|+.+.++++|..+.+.| +-|.|.-++..+.-+...
T Consensus 8 ~~is~~~i~~~i~~la~~I~~~~--~~d~vvgv~~GG~~fa~~ 48 (156)
T PRK09177 8 FPVSWDQLHRDARALAWRLLPAG--QWKGIIAVTRGGLVPAAI 48 (156)
T ss_pred EEcCHHHHHHHHHHHHHHHHhhC--CCCEEEEEecCCeehHHH
Confidence 35899999999999999998764 235555555555443333
No 327
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=30.22 E-value=3.7e+02 Score=24.01 Aligned_cols=57 Identities=12% Similarity=0.070 Sum_probs=44.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 54 AGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 54 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
..+.| +....+-.-..+.++|...|..++.+-|....+.....++..+++++.+...
T Consensus 55 ~~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 55 GGRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TTSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred cccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 34556 6666677777788888888998888877777777888999999999988664
No 328
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=30.21 E-value=2e+02 Score=20.40 Aligned_cols=65 Identities=18% Similarity=0.149 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHcCC---------CCCCEEEEE-CCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHH
Q 014065 34 SRIHELVERAASRLVAAGI---------NAGDVVALT-FPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYL 98 (431)
Q Consensus 34 ~el~~~~~~~a~~L~~~gl---------~~gd~V~i~-~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 98 (431)
.+.-+|..++...+.+.|. .+=|.|.|+ .|+......+.+++...|.+-.-.-+.++.+++..++
T Consensus 16 ~~~~~R~~a~~~~~e~~Gg~l~~~y~t~G~yD~v~i~eaPD~~~a~~~~l~i~~~G~v~~et~~a~~~~e~~~~~ 90 (91)
T PF08734_consen 16 KDSPDRAEAVRALIEALGGKLKSFYWTLGEYDFVVIVEAPDDETAAAASLAIRSSGNVRTETLRAFPWDEFDEIV 90 (91)
T ss_pred hhcHHHHHHHHHHHHHcCCEEEEEEEecCCCCEEEEEEcCCHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHh
Confidence 3335566666666666664 345777777 5555557778899999997666666777888877665
No 329
>PRK07409 threonine synthase; Validated
Probab=30.16 E-value=2.6e+02 Score=25.93 Aligned_cols=52 Identities=8% Similarity=-0.223 Sum_probs=35.9
Q ss_pred CCCcHHHHHHHHHHHHhCcEEEecCCCC-CHHHHHHHHhcCCceEEEecCCch
Q 014065 62 FPNTVEFVIMFLAVIRARATAAPLNAAY-TPDEFEFYLSDSESKLLLTPAEGN 113 (431)
Q Consensus 62 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~~~~ 113 (431)
...+-.-..+.++|...|..+..+-|.. ....-...++..++++++++....
T Consensus 84 aSsGN~g~alA~~a~~~G~~~~ivvP~~~~~~~k~~~~~~~GA~Vi~~~~~~~ 136 (353)
T PRK07409 84 ASTGNTSASAAAYAARAGLKAFVLIPEGKIALGKLAQAVMYGAEIIQIDGNFD 136 (353)
T ss_pred ECCcHHHHHHHHHHHHcCCCEEEEEcCCCCchhhHHHHHhcCCEEEEECCCHH
Confidence 3445556788888899998765555553 344445566788999999987533
No 330
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.04 E-value=3e+02 Score=24.57 Aligned_cols=84 Identities=2% Similarity=-0.024 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHH---HHHHHHhcCCceEEEec
Q 014065 33 YSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPD---EFEFYLSDSESKLLLTP 109 (431)
Q Consensus 33 y~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~l~~~l~~~~~~~ii~~ 109 (431)
++++.++.+.+-..+.+.--...++..+...+...++.-.|++-..+..-.--...-+.+ ++...++..++++||+.
T Consensus 156 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e 235 (286)
T cd01019 156 LEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAE 235 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 445555555555555543111234566667778777776665433332111111223444 45666778999999998
Q ss_pred CCchhHH
Q 014065 110 AEGNAAA 116 (431)
Q Consensus 110 ~~~~~~~ 116 (431)
+......
T Consensus 236 ~~~~~~~ 242 (286)
T cd01019 236 PQFHPKI 242 (286)
T ss_pred CCCChHH
Confidence 8755443
No 331
>PRK06110 hypothetical protein; Provisional
Probab=29.79 E-value=4.3e+02 Score=24.04 Aligned_cols=56 Identities=11% Similarity=-0.060 Sum_probs=39.5
Q ss_pred EEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchh
Q 014065 59 ALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA 114 (431)
Q Consensus 59 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 114 (431)
.+....+-.-..+.++|.+.|..+..+=|..........++..+++++.++....+
T Consensus 73 vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~ 128 (322)
T PRK06110 73 VISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELIEHGEDFQA 128 (322)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 34445566777788889999986666555544445568889999999998765433
No 332
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=29.66 E-value=53 Score=19.88 Aligned_cols=25 Identities=12% Similarity=0.251 Sum_probs=21.0
Q ss_pred cEEEeccCCCcHHHHHHHHHHhCCc
Q 014065 282 RFIRSCSASLAPVILSRLEEAFGAP 306 (431)
Q Consensus 282 ~~i~~~g~~~~~~~~~~~~~~~~~~ 306 (431)
+++-++|.|++.+....++..|+-+
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~ 46 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKR 46 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhh
Confidence 5678899999999999998887644
No 333
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=29.34 E-value=28 Score=15.62 Aligned_cols=9 Identities=22% Similarity=0.423 Sum_probs=6.5
Q ss_pred ccCcccccC
Q 014065 310 AYAMTEATH 318 (431)
Q Consensus 310 ~yg~tE~~~ 318 (431)
.||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888764
No 334
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=29.27 E-value=4.4e+02 Score=23.96 Aligned_cols=52 Identities=6% Similarity=-0.089 Sum_probs=40.0
Q ss_pred ECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 61 TFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 61 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
....+-.-..+.++|.+.|..++.+-|..........++..++++++++...
T Consensus 72 ~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~~ 123 (317)
T TIGR02991 72 AASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQ 123 (317)
T ss_pred EECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCCH
Confidence 3444666777788899999987776666666677888899999999998753
No 335
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=29.09 E-value=3.4e+02 Score=23.18 Aligned_cols=84 Identities=7% Similarity=0.038 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHH------HHHhcccCCCCCCCCCccEEE
Q 014065 212 FHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQ------IVLDRHVAKPEPVYPKLRFIR 285 (431)
Q Consensus 212 ~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~------~l~~~~~~~~~~~~~~l~~i~ 285 (431)
-|..|-.. +...+...+-=++-=+....++++.+..+++++..+.++..+=- .+.+...... +..-=.+.
T Consensus 116 vHdIGk~i-V~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeG---iRd~v~v~ 191 (227)
T COG5012 116 VHDIGKNI-VATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEG---IRDKVIVM 191 (227)
T ss_pred HHHHHHHH-HHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcC---CccCeEEe
Confidence 45555443 33333333322322222678999999999999998887644322 2222222221 22222245
Q ss_pred eccCCCcHHHHHHH
Q 014065 286 SCSASLAPVILSRL 299 (431)
Q Consensus 286 ~~g~~~~~~~~~~~ 299 (431)
.||.|++.+..+.+
T Consensus 192 vGGApvtq~~a~~i 205 (227)
T COG5012 192 VGGAPVTQDWADKI 205 (227)
T ss_pred ecCccccHHHHHHh
Confidence 68999999887664
No 336
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only]
Probab=29.05 E-value=1.9e+02 Score=25.54 Aligned_cols=60 Identities=18% Similarity=0.266 Sum_probs=40.0
Q ss_pred HHHHHHhcCCcceEEec-C--CCcccHHHHHHHHHHHHHHHHHc--CCCCCC-EEEEECCCcHHHH
Q 014065 10 LNQVIDQFSSKRALSVS-G--KFDLTYSRIHELVERAASRLVAA--GINAGD-VVALTFPNTVEFV 69 (431)
Q Consensus 10 l~~~a~~~p~~~a~~~~-~--~~~~Ty~el~~~~~~~a~~L~~~--gl~~gd-~V~i~~~n~~~~~ 69 (431)
+..+|+.....+.|++. + .-.--|++|...+..+.+.|+.. |++.++ +|-|...|.++.+
T Consensus 202 ly~rA~~~aPcivFiDE~DAiaLdRryQelRGDVsEiVNALLTelDgi~eneGVvtIaaTN~p~~L 267 (368)
T COG1223 202 LYERARKAAPCIVFIDELDAIALDRRYQELRGDVSEIVNALLTELDGIKENEGVVTIAATNRPELL 267 (368)
T ss_pred HHHHHHhcCCeEEEehhhhhhhhhhhHHHhcccHHHHHHHHHHhccCcccCCceEEEeecCChhhc
Confidence 44555555555555432 1 13456999999999999998864 888887 5666677776643
No 337
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=29.04 E-value=2.5e+02 Score=22.90 Aligned_cols=47 Identities=13% Similarity=0.091 Sum_probs=30.9
Q ss_pred CcccHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCcHHHHHHHHHHH
Q 014065 29 FDLTYSRIHELVERAASRLVAA--GINAGDVVALTFPNTVEFVIMFLAVI 76 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~--gl~~gd~V~i~~~n~~~~~~~~lA~~ 76 (431)
.-+||.|+.+++.++|..+.+. |.+ .+.|.-++..+..+...+...+
T Consensus 5 ~l~s~~~i~~~i~~la~~i~~~~~~~~-~~viv~il~gG~~~a~~La~~L 53 (176)
T PRK05205 5 EILDAEALRRALTRIAHEIIERNKGLD-NLVLVGIKTRGVWLAERLAERL 53 (176)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHcCCCC-CeEEEEEccCCHHHHHHHHHHH
Confidence 4689999999999999999884 432 3444444444554444444433
No 338
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=29.03 E-value=2.7e+02 Score=22.41 Aligned_cols=44 Identities=9% Similarity=0.138 Sum_probs=28.9
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCC-CCCEEEEECCCcHHHHHHHHHH
Q 014065 31 LTYSRIHELVERAASRLVAAGIN-AGDVVALTFPNTVEFVIMFLAV 75 (431)
Q Consensus 31 ~Ty~el~~~~~~~a~~L~~~gl~-~gd~V~i~~~n~~~~~~~~lA~ 75 (431)
+||.|+.+.+.++|..+.+. .+ ..+.|.-.+..+..+...+.-.
T Consensus 3 is~~~i~~~i~~lA~~I~~~-~~~~~~vvv~i~~GG~~~a~~l~~~ 47 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED-YAGKPLVLLCVLKGSFPFFADLIRY 47 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH-cCCCCeEEEEEccCCHHHHHHHHHh
Confidence 79999999999999999875 21 2234444455555554444333
No 339
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=29.00 E-value=1.6e+02 Score=25.23 Aligned_cols=37 Identities=8% Similarity=-0.075 Sum_probs=27.3
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH
Q 014065 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE 67 (431)
Q Consensus 31 ~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~ 67 (431)
=||.|+.+|+..+-..+......+|++|+++...++-
T Consensus 150 ES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vi 186 (228)
T PRK14119 150 ESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSI 186 (228)
T ss_pred CCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHH
Confidence 4788999999887777655444577888888876543
No 340
>PRK12483 threonine dehydratase; Reviewed
Probab=28.79 E-value=4.6e+02 Score=25.98 Aligned_cols=56 Identities=16% Similarity=-0.026 Sum_probs=41.6
Q ss_pred EECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 60 LTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 60 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
+....+-....+.++|.++|..++.+=|...+..-...++..+++++++.....+.
T Consensus 89 V~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~d~a 144 (521)
T PRK12483 89 ITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPDA 144 (521)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHH
Confidence 34444566677778899999877777676666666788999999999998664433
No 341
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=28.76 E-value=80 Score=16.47 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=14.2
Q ss_pred EcCCCeEEEeccccccee
Q 014065 397 FDSDGYLHLVGRIKELIN 414 (431)
Q Consensus 397 ~~~~g~l~~~gR~~d~i~ 414 (431)
++++|.+++.++....|.
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 448999999998877664
No 342
>PLN02409 serine--glyoxylate aminotransaminase
Probab=28.27 E-value=4.2e+02 Score=25.02 Aligned_cols=33 Identities=0% Similarity=-0.123 Sum_probs=13.4
Q ss_pred HHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 76 IRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 76 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+.-|-.++..++.........+++..+.++..+
T Consensus 81 ~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v 113 (401)
T PLN02409 81 LSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVV 113 (401)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHcCCceEEE
Confidence 334443333333333333334444444444444
No 343
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.05 E-value=6.4e+02 Score=25.46 Aligned_cols=85 Identities=11% Similarity=0.059 Sum_probs=57.5
Q ss_pred eeechHHHHHHHHHHHHHhc--CCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC-CCCCC-ChhhHHHHHHHhcce
Q 014065 179 VPLTQNNLAASVSNIKSVYK--LTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP-AAGRF-SASTFWQDMIKYNAT 254 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~-~~~~~~~~i~~~~~t 254 (431)
..+|...+...+..+...+. +.++|++...++-.. .+...+++++..|+..+-. +.... ....+...+++.++.
T Consensus 54 ~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 131 (631)
T PRK07769 54 RDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNL--DYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPS 131 (631)
T ss_pred eEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCCh--HHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCC
Confidence 35788888776665544332 578899988887543 3445578888999887743 21111 246688888899999
Q ss_pred eeecchHHHHH
Q 014065 255 WYTAVPTIHQI 265 (431)
Q Consensus 255 ~~~~~p~~~~~ 265 (431)
.++..+.....
T Consensus 132 ~vi~~~~~~~~ 142 (631)
T PRK07769 132 AILTTTDSAEG 142 (631)
T ss_pred EEEEChHHHHH
Confidence 98887765543
No 344
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=27.93 E-value=2e+02 Score=29.64 Aligned_cols=57 Identities=12% Similarity=0.101 Sum_probs=41.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCC---------CH-----HHHHHHHhcCC-c----eEEEecCC
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAY---------TP-----DEFEFYLSDSE-S----KLLLTPAE 111 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~---------~~-----~~l~~~l~~~~-~----~~ii~~~~ 111 (431)
+++||.|. +..|+--++.- |+..+|++++.+.|.. +. +.++..++... + .++|+.+.
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~~--aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT 307 (713)
T PRK15399 232 APAGSTLL-IDRNCHKSLAH--LLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST 307 (713)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC
Confidence 57899665 77787777555 9999999999998875 23 67777776542 2 45666665
No 345
>PRK08638 threonine dehydratase; Validated
Probab=27.89 E-value=4.7e+02 Score=23.99 Aligned_cols=54 Identities=7% Similarity=-0.088 Sum_probs=41.5
Q ss_pred EECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch
Q 014065 60 LTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN 113 (431)
Q Consensus 60 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 113 (431)
+....+-.-..+.++|...|..+..+-|..........++..+++++++.....
T Consensus 79 v~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 132 (333)
T PRK08638 79 VACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFN 132 (333)
T ss_pred EEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHH
Confidence 334446667778888999999877777766667778899999999999976543
No 346
>PRK14072 6-phosphofructokinase; Provisional
Probab=27.73 E-value=3.6e+02 Score=25.72 Aligned_cols=57 Identities=16% Similarity=0.152 Sum_probs=40.1
Q ss_pred eEEEecChhhHHHHHHHHHHHHh-----cCCEEEeCCCCCCChhhHHHHHHHh---cceeeecchH
Q 014065 204 STVIVLPLFHVHGMLAGLLSSFA-----AGAAVTLPAAGRFSASTFWQDMIKY---NATWYTAVPT 261 (431)
Q Consensus 204 ~~~~~~p~~~~~~~~~~~~~~l~-----~G~~~~~~~~~~~~~~~~~~~i~~~---~~t~~~~~p~ 261 (431)
+++..=-+....|++. +..++. .|+-+++.|...++.+.+++.|++. +-..+..++.
T Consensus 181 Rv~iVEvMGR~aG~LA-l~a~lA~~~~~~gad~iliPE~~~~~~~~~~~i~~~~~~~~~~ivvVaE 245 (416)
T PRK14072 181 KVFILEVMGRHAGWLA-AAAALAKQNPDDAPHLIYLPERPFDEEKFLADVRAIVKRYGYCVVVVSE 245 (416)
T ss_pred eEEEEEEeCcchhHHH-HHHhhccccCCCCccEEEccCCCCCHHHHHHHHHHHHHhCCCeEEEEec
Confidence 5666555666667766 888899 8999998887678888888877652 3344444433
No 347
>PTZ00297 pantothenate kinase; Provisional
Probab=27.53 E-value=8.2e+02 Score=27.99 Aligned_cols=98 Identities=11% Similarity=-0.062 Sum_probs=69.4
Q ss_pred eeechHHHHHHHHHHH---HHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIK---SVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+. ..+++.++|++...++-.. .+....++++..|+..+-.. .....+...+++.++++
T Consensus 456 ~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~--Ewvia~lA~~~~GaV~VPly---~t~~eL~yIL~~S~akv 530 (1452)
T PTZ00297 456 EWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASR--NIVILEVACALYGFTTLPLV---GKGSTMRTLIDEHKIKV 530 (1452)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEEeCC---CCHHHHHHHHHhcCCcE
Confidence 3578888876666544 4458999999988887533 34444777888888887553 24567888899999999
Q ss_pred eecchHHHHHHHhcccCCCCCCCCCccEEEecc
Q 014065 256 YTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCS 288 (431)
Q Consensus 256 ~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g 288 (431)
+++....+..+.+... +.++.+++-.
T Consensus 531 Vfv~~~~l~kl~~i~~-------~~Lr~IIv~d 556 (1452)
T PTZ00297 531 VFADRNSVAAILTCRS-------RKLETVVYTH 556 (1452)
T ss_pred EEEchhHHHHHHhhcc-------cCCcEEEEEC
Confidence 9998888777654311 2577776654
No 348
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=27.30 E-value=2.5e+02 Score=20.51 Aligned_cols=50 Identities=16% Similarity=0.060 Sum_probs=35.1
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEec
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPL 85 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 85 (431)
..+.+.++.+ .+.+.+..+++.|.++|.++.....+...+.+.|..-+-.
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~~ 90 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAEN 90 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEEe
Confidence 4567766543 3444455566789999999888888888888888765543
No 349
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=27.08 E-value=1.8e+02 Score=21.66 Aligned_cols=41 Identities=17% Similarity=0.035 Sum_probs=30.9
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCC-cHHHHHHHHHHHHhCcE
Q 014065 41 ERAASRLVAAGINAGDVVALTFPN-TVEFVIMFLAVIRARAT 81 (431)
Q Consensus 41 ~~~a~~L~~~gl~~gd~V~i~~~n-~~~~~~~~lA~~~~G~~ 81 (431)
..+.+.+...++.+++.|.+++.. +.....+...+...|..
T Consensus 65 ~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 455666667788889999999988 46666667777778854
No 350
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=27.06 E-value=3e+02 Score=25.86 Aligned_cols=58 Identities=9% Similarity=-0.131 Sum_probs=42.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch
Q 014065 56 DVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN 113 (431)
Q Consensus 56 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 113 (431)
..-.+....+-.-..+.++|.+.|..++.+=|..........++..+++++++.....
T Consensus 94 ~~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~ 151 (376)
T TIGR01747 94 QATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYD 151 (376)
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHH
Confidence 3344555556667777888889998777766665556777788899999999986543
No 351
>cd00432 Ribosomal_L18_L5e Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA depends on the binding of L18 and L5 to 5S rRNA. L18/L5e is generally described as L18 in prokaryotes and archaea, and as L5e (or L5) in eukaryotes. In bacteria, the CP proteins L5, L18, and L25 are required for the ribosome to incorporate 5S rRNA into the large subunit, one of the last steps in ribosome assembly. In archaea, both L18 and L5 bind 5S rRNA; in eukaryotes, only the L18 homolog (L5e) binds 5S rRNA but a homolog to L5 is also identified.
Probab=26.98 E-value=2.1e+02 Score=20.87 Aligned_cols=43 Identities=21% Similarity=0.183 Sum_probs=30.6
Q ss_pred cHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCC
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGI 52 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl 52 (431)
.++++|-+++....-..++.+.++ ..| ..++..++..+++.|+
T Consensus 61 ~vG~~la~r~~~~gi~~vv~D~~~--~~~---~grv~a~~~~~r~~Gl 103 (103)
T cd00432 61 LVGRLLAKRALEKGIKKVVFDRGG--YRY---HGRVKALAKGAREGGL 103 (103)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCC--ccc---ccHHHHHHHHHHHcCC
Confidence 467788888887766666655443 333 8889999999888775
No 352
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=26.65 E-value=5.3e+02 Score=24.76 Aligned_cols=53 Identities=13% Similarity=0.133 Sum_probs=33.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC--------------CCHHHHHHHHhcC---CceEEEe
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA--------------YTPDEFEFYLSDS---ESKLLLT 108 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--------------~~~~~l~~~l~~~---~~~~ii~ 108 (431)
++|||.| + +| +.+....-++...|+.++.++.. .+.+.++..+... +.++|++
T Consensus 89 ~~pGD~V-~--~~-~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v 158 (431)
T cd00617 89 LKPGRTV-P--SN-MHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVL 158 (431)
T ss_pred CCCCCEE-c--cC-CcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEE
Confidence 7899966 2 33 44444445677788877765432 4577888888754 2555554
No 353
>PRK07868 acyl-CoA synthetase; Validated
Probab=26.54 E-value=4.7e+02 Score=28.41 Aligned_cols=81 Identities=12% Similarity=0.059 Sum_probs=58.9
Q ss_pred eechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+... .++.+++++...++-.- .+...+++++..|+..+..++ ...+...++..+++.+
T Consensus 472 ~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~--e~v~a~lA~~~aGav~vpl~p----~~~l~~il~~s~~~~l 545 (994)
T PRK07868 472 VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRP--SALVAIAALSRLGAVAVLMPP----DTDLAAAVRLGGVTEI 545 (994)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCCEEEEeCC----chhHHHHHhccCCeEE
Confidence 57888887776665544 47889999988887543 334458889999999987663 2466677888888888
Q ss_pred ecchHHHHHH
Q 014065 257 TAVPTIHQIV 266 (431)
Q Consensus 257 ~~~p~~~~~l 266 (431)
+..+..+..+
T Consensus 546 i~~~~~~~~~ 555 (994)
T PRK07868 546 ITDPTNLEAA 555 (994)
T ss_pred EEChHHHHHH
Confidence 8877665544
No 354
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=26.51 E-value=4.3e+02 Score=25.93 Aligned_cols=88 Identities=22% Similarity=0.178 Sum_probs=57.8
Q ss_pred CCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCC-CCCEEEEECCCcHH-HHHHHHHHHHhCcEEEecCC
Q 014065 18 SSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGIN-AGDVVALTFPNTVE-FVIMFLAVIRARATAAPLNA 87 (431)
Q Consensus 18 p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~-~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 87 (431)
++.+|++... +..+|++.+...+..++.. .++. ++|++...+|-... .+..+++++..|+..+..++
T Consensus 151 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~ 227 (525)
T PRK05851 151 SGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAPT 227 (525)
T ss_pred CCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcCH
Confidence 4566665432 2458998888776665543 3677 88888887776432 23456778888998877653
Q ss_pred -CC--CHHHHHHHHhcCCceEEEe
Q 014065 88 -AY--TPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 88 -~~--~~~~l~~~l~~~~~~~ii~ 108 (431)
.. ....+...+.+.++..+.+
T Consensus 228 ~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 228 TAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHCHHHHHHHHHHhCCeEEeC
Confidence 12 3556778888888886644
No 355
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=26.42 E-value=3.1e+02 Score=21.29 Aligned_cols=46 Identities=17% Similarity=0.120 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 66 VEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 66 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
.-..+....+-..|..++.+..+.+.+++.....+.++++|..+..
T Consensus 18 lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~ 63 (137)
T PRK02261 18 VGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSL 63 (137)
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCc
Confidence 4455566667789999999999999999999999999999998854
No 356
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=26.22 E-value=3.9e+02 Score=23.50 Aligned_cols=75 Identities=19% Similarity=0.067 Sum_probs=42.8
Q ss_pred cccHHHHHHHHHHH---HHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE-EEecCCCCCHHHHHHHHhcCCceE
Q 014065 30 DLTYSRIHELVERA---ASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT-AAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 30 ~~Ty~el~~~~~~~---a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
.+++.+........ .+.+.+.+..+|++|++...-.+-.+++.+|- ..|+. ++.++ .+.+. ..+.+..+++.
T Consensus 93 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak-~~G~~~Vi~~~--~~~~r-~~~a~~~Ga~~ 168 (280)
T TIGR03366 93 DLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAA-AAGAARVVAAD--PSPDR-RELALSFGATA 168 (280)
T ss_pred CCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEC--CCHHH-HHHHHHcCCcE
Confidence 45665543322221 23455556779999999977555566666554 45875 44443 23333 34566677776
Q ss_pred EEe
Q 014065 106 LLT 108 (431)
Q Consensus 106 ii~ 108 (431)
++.
T Consensus 169 ~i~ 171 (280)
T TIGR03366 169 LAE 171 (280)
T ss_pred ecC
Confidence 664
No 357
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=25.89 E-value=1e+02 Score=26.16 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=24.1
Q ss_pred HHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 73 LAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 73 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
=++.++|+.++++++..+.+.+..+++..+ .++.
T Consensus 31 ~~i~~aG~~pv~ip~~~~~~~~~~~l~~id--Glll 64 (217)
T PF07722_consen 31 KAIEAAGGRPVPIPYDADDEELDELLDRID--GLLL 64 (217)
T ss_dssp HHHHHTT-EEEEE-SS--HHHHHHHHHCSS--EEEE
T ss_pred HHHHHcCCEEEEEccCCCHHHHHHHHhhcC--EEEE
Confidence 356788999999999999999999999764 4443
No 358
>PRK08197 threonine synthase; Validated
Probab=25.43 E-value=3.5e+02 Score=25.50 Aligned_cols=51 Identities=16% Similarity=-0.042 Sum_probs=36.1
Q ss_pred CCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 62 FPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 62 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
...+-.-..+.+++.+.|..+..+=|..........++..+++++.++...
T Consensus 133 aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~~~~ 183 (394)
T PRK08197 133 PTNGNAGAAWAAYAARAGIRATIFMPADAPEITRLECALAGAELYLVDGLI 183 (394)
T ss_pred eCCcHHHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 334555566666777888866666555555556788999999999998653
No 359
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=25.39 E-value=2.9e+02 Score=20.52 Aligned_cols=43 Identities=14% Similarity=0.066 Sum_probs=34.4
Q ss_pred HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 69 VIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 69 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
......+-..|..++.+.+..+.+++...+.+.++++|..+..
T Consensus 17 ~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 17 NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 3344444558888889999999999999999999999988754
No 360
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.31 E-value=5.1e+02 Score=23.35 Aligned_cols=77 Identities=10% Similarity=0.042 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCcHHHHH---HHHHHHHhCcEE--EecCCCCCHHHHHHHHhcC----Cc
Q 014065 34 SRIHELVERAASRLVAA-GINAGDVVALTFPNTVEFVI---MFLAVIRARATA--APLNAAYTPDEFEFYLSDS----ES 103 (431)
Q Consensus 34 ~el~~~~~~~a~~L~~~-gl~~gd~V~i~~~n~~~~~~---~~lA~~~~G~~~--v~l~~~~~~~~l~~~l~~~----~~ 103 (431)
+++.+...+-...|.++ |.+|+=.+.++.++...... -.=+|-++|..+ .-++.+.+.+++...+++. ..
T Consensus 11 ~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 90 (293)
T PRK14185 11 AQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDV 90 (293)
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 44555555555566665 77774444444444333222 244889999887 5567777788777666655 44
Q ss_pred eEEEecC
Q 014065 104 KLLLTPA 110 (431)
Q Consensus 104 ~~ii~~~ 110 (431)
+.+++..
T Consensus 91 ~GIlvql 97 (293)
T PRK14185 91 DGFIVQL 97 (293)
T ss_pred CeEEEec
Confidence 5677653
No 361
>PRK06234 methionine gamma-lyase; Provisional
Probab=25.21 E-value=5.9e+02 Score=24.07 Aligned_cols=55 Identities=15% Similarity=0.097 Sum_probs=28.6
Q ss_pred CCCCCEEEEECCCcHHHHH-HHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 52 INAGDVVALTFPNTVEFVI-MFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+++||.|.+..+.-..... ...++-..|+.+..++.. +.+++...++. +.++|++
T Consensus 100 l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-d~e~l~~~i~~-~tklI~i 155 (400)
T PRK06234 100 LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-NLEEVRNALKA-NTKVVYL 155 (400)
T ss_pred hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC-CHHHHHHHhcc-CCeEEEE
Confidence 4677776655443222222 223445567777666554 45556665543 3455553
No 362
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=25.10 E-value=3.9e+02 Score=24.22 Aligned_cols=83 Identities=5% Similarity=0.031 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCC--CHHH---HHHHHhcCCceEEE
Q 014065 33 YSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAY--TPDE---FEFYLSDSESKLLL 107 (431)
Q Consensus 33 y~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~--~~~~---l~~~l~~~~~~~ii 107 (431)
++++.++.+.+-..+++.--...++..+...+...++.--|++-..|.. -+.+.. +.++ +...++..++++||
T Consensus 180 ~~~~~~~L~~l~~~~~~~l~~~~~~~~i~~H~af~Yf~~~ygl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~If 257 (311)
T PRK09545 180 LKDFEAQLAQTDKQIGNQLAPVKGKGYFVFHDAYGYFEKHYGLTPLGHF--TVNPEIQPGAQRLHEIRTQLVEQKATCVF 257 (311)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCcEEEECchHHHHHHhCCCceeeee--ccCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 4445555555555555431111234456677778888777766655532 123322 3444 56666788999999
Q ss_pred ecCCchhHHH
Q 014065 108 TPAEGNAAAQ 117 (431)
Q Consensus 108 ~~~~~~~~~~ 117 (431)
+.+...+...
T Consensus 258 ~e~~~~~~~~ 267 (311)
T PRK09545 258 AEPQFRPAVI 267 (311)
T ss_pred ecCCCChHHH
Confidence 9987554433
No 363
>TIGR00260 thrC threonine synthase. Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model.
Probab=24.99 E-value=3.1e+02 Score=25.02 Aligned_cols=78 Identities=9% Similarity=-0.088 Sum_probs=46.1
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCC-CHHHHHHHHhcCCceEEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAY-TPDEFEFYLSDSESKLLL 107 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii 107 (431)
.+-||++.- +..+...+.+.| ....+....+-.-..+.++|...|..++.+-|.. ....-...++..++++++
T Consensus 50 ptGSfKdR~--a~~~l~~a~~~g----~~~vv~aSsGN~g~a~A~~a~~~g~~~~v~~p~~~~s~~k~~~~~~~GA~Vi~ 123 (328)
T TIGR00260 50 PTLSFKDRG--MAVALTKALELG----NDTVLCASTGNTGAAAAAYAGKAGVKVVILYPAGKISLGKLAQALGYNAEVVA 123 (328)
T ss_pred CchhhHhhh--HHHHHHHHHHcC----CCEEEEeCCcHHHHHHHHHhccCCCcEEEEECCCCCCHHHHHHHHhcCcEEEE
Confidence 455666654 222222233333 2233334444445555578889998777777765 345555666789999999
Q ss_pred ecCCc
Q 014065 108 TPAEG 112 (431)
Q Consensus 108 ~~~~~ 112 (431)
++...
T Consensus 124 ~~~~~ 128 (328)
T TIGR00260 124 IDGNF 128 (328)
T ss_pred ecCCH
Confidence 98653
No 364
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=24.91 E-value=2.1e+02 Score=24.87 Aligned_cols=37 Identities=11% Similarity=-0.035 Sum_probs=26.1
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH
Q 014065 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE 67 (431)
Q Consensus 31 ~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~ 67 (431)
=||.|+.+|+...-..+......+++.|+++...++-
T Consensus 149 ES~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~vi 185 (245)
T TIGR01258 149 ESLKDTIARVLPYWNDEIAPDLLSGKRVLIVAHGNSL 185 (245)
T ss_pred CCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEcChHHH
Confidence 3778999998887766654334567888888876543
No 365
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.89 E-value=5.9e+02 Score=25.02 Aligned_cols=78 Identities=14% Similarity=0.114 Sum_probs=53.1
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCC-CEEEEECCCc--HHHHHHHHHHHHhCcEEEecCCCC---CHHHHHHHHhcCC
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAG-DVVALTFPNT--VEFVIMFLAVIRARATAAPLNAAY---TPDEFEFYLSDSE 102 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~g-d~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~ 102 (431)
..+|++.+...+..+... .++.++ |++...+|.. ..++..+++.+..|+..+.+.+.. ....+..++++.+
T Consensus 170 v~~s~~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~ 246 (545)
T PRK07768 170 VQITHGNLYANAEAMFVA---AEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYR 246 (545)
T ss_pred EEEcHHHHHHHHHHHHHh---cCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhC
Confidence 458888887655544333 467776 7887777653 445555667788899888776532 4556778899999
Q ss_pred ceEEEec
Q 014065 103 SKLLLTP 109 (431)
Q Consensus 103 ~~~ii~~ 109 (431)
++++.+.
T Consensus 247 ~~~~~~~ 253 (545)
T PRK07768 247 GTMTAAP 253 (545)
T ss_pred CEEEECc
Confidence 9876543
No 366
>PRK08526 threonine dehydratase; Provisional
Probab=24.83 E-value=5e+02 Score=24.65 Aligned_cols=54 Identities=9% Similarity=-0.111 Sum_probs=40.0
Q ss_pred CCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 62 FPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 62 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
...+-....+.++|.+.|..+..+=|...+..-...++..+++++++.....+.
T Consensus 74 aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~~~~~a 127 (403)
T PRK08526 74 ASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDNYDEA 127 (403)
T ss_pred ECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 455566777788899999877777666665555677899999999998764433
No 367
>PRK10083 putative oxidoreductase; Provisional
Probab=24.80 E-value=5.2e+02 Score=23.35 Aligned_cols=58 Identities=10% Similarity=0.028 Sum_probs=35.5
Q ss_pred HcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE-EEecCCCCCHHHHHHHHhcCCceEEEec
Q 014065 49 AAGINAGDVVALTFPNTVEFVIMFLAVIRARAT-AAPLNAAYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 49 ~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
..++++|++|++......-..++.+|-...|+. ++.+.. +.+ -..++...+++.++..
T Consensus 155 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~--~~~-~~~~~~~~Ga~~~i~~ 213 (339)
T PRK10083 155 RTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADR--IDE-RLALAKESGADWVINN 213 (339)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcC--CHH-HHHHHHHhCCcEEecC
Confidence 347899999999986556565555555445874 443433 222 3345566777766643
No 368
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.75 E-value=3.8e+02 Score=23.94 Aligned_cols=83 Identities=10% Similarity=-0.011 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHH---HHHHHHhcCCceEEE
Q 014065 33 YSRIHELVERAASRLVAA--GINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPD---EFEFYLSDSESKLLL 107 (431)
Q Consensus 33 y~el~~~~~~~a~~L~~~--gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~l~~~l~~~~~~~ii 107 (431)
++++.++.+.+-+.+++. .+....+..+...+...++.-.|++-..+..-.--...-+.+ ++...+++.++++||
T Consensus 152 ~~~~~~~L~~l~~~~~~~l~~~~~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if 231 (287)
T cd01137 152 AAAYKAKLKALDEWAKAKFATIPAEKRKLVTSEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVF 231 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCEEEEecccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 444555555555555542 333335667777777777766665444432111011222444 456667888999999
Q ss_pred ecCCchhH
Q 014065 108 TPAEGNAA 115 (431)
Q Consensus 108 ~~~~~~~~ 115 (431)
+++.....
T Consensus 232 ~e~~~~~~ 239 (287)
T cd01137 232 VESTVNDR 239 (287)
T ss_pred EeCCCChH
Confidence 98875543
No 369
>PRK02991 D-serine dehydratase; Provisional
Probab=24.75 E-value=3.7e+02 Score=25.87 Aligned_cols=57 Identities=5% Similarity=-0.225 Sum_probs=42.6
Q ss_pred EEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 59 ALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 59 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
.+....+-.-..+.++|.+.|..+..+=|..........++..++++++++....+.
T Consensus 160 VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~~~~a 216 (441)
T PRK02991 160 IAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGDYGVA 216 (441)
T ss_pred EEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 344555666777788899999877776666666777778999999999998764443
No 370
>PRK06352 threonine synthase; Validated
Probab=24.58 E-value=3.8e+02 Score=24.81 Aligned_cols=50 Identities=6% Similarity=-0.243 Sum_probs=36.0
Q ss_pred CCcHHHHHHHHHHHHhCcEEEecCCCC-CHHHHHHHHhcCCceEEEecCCc
Q 014065 63 PNTVEFVIMFLAVIRARATAAPLNAAY-TPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 63 ~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
..+-.-..+.++|.+.|..+..+-|.. ....-...++..+++++++....
T Consensus 82 SsGN~G~AlA~~aa~~G~~~~ivvp~~~~~~~k~~~~~a~GA~V~~~~~~~ 132 (351)
T PRK06352 82 STGNTSAAAAAYATRAGLKAYIVIPEGKVALGKLAQAVMYGADIISIQGNF 132 (351)
T ss_pred CCcHHHHHHHHHHHHcCCcEEEEEeCCCCcHHHHHHHHhcCCEEEEECCCH
Confidence 344455677778889999887777764 24555566689999999998653
No 371
>cd06353 PBP1_BmpA_Med_like Periplasmic binding domain of the basic membrane lipoprotein Med in Bacillus and its close homologs from other bacteria and Archaea. Periplasmic binding domain of the basic membrane lipoprotein Med in Bacillus and its close homologs from other bacteria and Archaea. Med, a cell-surface localized protein, which regulates the competence transcription factor gene comK in Bacillus subtilis, lacks the DNA binding domain when compared with structures of transcription regulators from the LacI family. Nevertheless, Med has significant overall sequence homology to various periplasmic substrate-binding proteins. Moreover, the structure of Med shows a striking similarity to PnrA, a periplasmic nucleoside binding protein of an ATP-binding cassette transport system. Members of this group contain the type I periplasmic sugar-binding protein-like fold.
Probab=24.55 E-value=4.8e+02 Score=22.79 Aligned_cols=105 Identities=10% Similarity=0.064 Sum_probs=58.5
Q ss_pred cHHHHHHHHHHhcCCcceEEecCC------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHh
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSGK------FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRA 78 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~~------~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 78 (431)
.+.+.+.+.|+++|+..++..+.. ..++|++- ...-+|..+-.. +.+...|+++.......+......+..
T Consensus 67 ~~~~~~~~vA~~~p~~~F~~~d~~~~~~Nv~~~~~~~~--e~~ylaG~~Aa~-~t~t~kVG~I~g~~~~~~~~~~~gF~~ 143 (258)
T cd06353 67 GFMDAALKVAKEYPDVKFEHCSGYKTAPNVGSYFARIY--EGRYLAGVVAGK-MTKTNKVGYVAAFPIPEVVRGINAFAL 143 (258)
T ss_pred hhhHHHHHHHHHCCCCEEEECCCCCCCCCeeeEechhh--HHHHHHHHHHHH-hhcCCcEEEEcCcccHHHHHHHHHHHH
Confidence 466788999999999998885431 23334332 222333333222 224457999988866666666666666
Q ss_pred CcEEEecCCC----------CC----HHHHHHHHhcCCceEEEecCCchh
Q 014065 79 RATAAPLNAA----------YT----PDEFEFYLSDSESKLLLTPAEGNA 114 (431)
Q Consensus 79 G~~~v~l~~~----------~~----~~~l~~~l~~~~~~~ii~~~~~~~ 114 (431)
|+..+ +|+ +. ..++..-+-..++++|+.......
T Consensus 144 G~~~~--~p~~~v~~~~~g~~~D~~~a~~~a~~l~~~G~DvI~~~~~~~g 191 (258)
T cd06353 144 GARSV--NPDATVKVIWTGSWFDPAKEKEAALALIDQGADVIYQHTDSPG 191 (258)
T ss_pred HHHHH--CCCcEEEEEEecCCCCcHHHHHHHHHHHHCCCcEEEecCCChH
Confidence 65421 122 11 123444344457888877654333
No 372
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=23.96 E-value=4.4e+02 Score=24.12 Aligned_cols=59 Identities=24% Similarity=0.345 Sum_probs=36.5
Q ss_pred HHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEec
Q 014065 47 LVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 47 L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+...++++|++|++......-..++.+|- ..|+..+.+.. +.+.+. .+...+++.++..
T Consensus 159 ~~~~~~~~g~~VlV~G~G~vG~~a~~~a~-~~G~~vi~~~~--~~~~~~-~~~~~Ga~~~i~~ 217 (349)
T TIGR03201 159 AVQAGLKKGDLVIVIGAGGVGGYMVQTAK-AMGAAVVAIDI--DPEKLE-MMKGFGADLTLNP 217 (349)
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCeEEEEcC--CHHHHH-HHHHhCCceEecC
Confidence 33457899999999998444555544544 45876554432 344444 4466777776643
No 373
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=23.95 E-value=2.9e+02 Score=25.58 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=54.1
Q ss_pred ccHHHHHHHHHHhcCCcceEEecC--------C--CcccHHHHHHHHHHH---HHHHHH---------cCCCCCCEEEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSG--------K--FDLTYSRIHELVERA---ASRLVA---------AGINAGDVVALT 61 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~--------~--~~~Ty~el~~~~~~~---a~~L~~---------~gl~~gd~V~i~ 61 (431)
.++.+.=+..-+.+||.+|+.-++ + ..++.+|..+.-+.+ +.++.+ .|++|
T Consensus 25 ~SveeVrr~I~~~~PDaVAVELd~~R~~sLl~~~~~~ldl~~vlk~Gk~~~~l~~~lLa~~Qrklg~~~Gv~P------- 97 (388)
T COG1916 25 DSVEEVRRIILEEKPDAVAVELDEARLLSLLGGSREELDLAQVLKEGKAFFLLAGLLLAYFQRKLGKELGVKP------- 97 (388)
T ss_pred hHHHHHHHHHHhcCCCeEEEEecHHHHHHHhcCCcccCCHHHHHHcCchHHHHHHHHHHHHHHHHHHhcCCCC-------
Confidence 345555555667799999998653 1 258888887654433 333332 26666
Q ss_pred CCCcHHHHHHHHHHHHhCcEEEecCCCCC
Q 014065 62 FPNTVEFVIMFLAVIRARATAAPLNAAYT 90 (431)
Q Consensus 62 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~ 90 (431)
+.|...++-++..+|+...+++.+..
T Consensus 98 ---GsEmk~AIe~A~e~ga~V~lIDRdI~ 123 (388)
T COG1916 98 ---GSEMKAAIEAARELGAPVALIDRDIG 123 (388)
T ss_pred ---hHHHHHHHHHHHHcCCCEEEecccHH
Confidence 55899999999999999999987754
No 374
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=23.92 E-value=3.8e+02 Score=24.59 Aligned_cols=17 Identities=18% Similarity=0.258 Sum_probs=7.5
Q ss_pred HHHHHHHHhcCCceEEE
Q 014065 91 PDEFEFYLSDSESKLLL 107 (431)
Q Consensus 91 ~~~l~~~l~~~~~~~ii 107 (431)
.+.+...+...++++++
T Consensus 137 ~~~l~~~~~~~~~k~v~ 153 (351)
T PRK14807 137 VGSFIKVIEKYQPKLVF 153 (351)
T ss_pred HHHHHHHhhccCCCEEE
Confidence 34444444433444444
No 375
>PLN02970 serine racemase
Probab=23.91 E-value=5.6e+02 Score=23.40 Aligned_cols=53 Identities=9% Similarity=-0.124 Sum_probs=39.7
Q ss_pred ECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch
Q 014065 61 TFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN 113 (431)
Q Consensus 61 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 113 (431)
....+-.-..+.++|...|..+..+=|..........++..+++++.++....
T Consensus 80 ~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~~~~ 132 (328)
T PLN02970 80 THSSGNHAAALALAAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEPTVE 132 (328)
T ss_pred EECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCCCHH
Confidence 34566677778888889998776666665555666778999999999987543
No 376
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.58 E-value=3.9e+02 Score=23.69 Aligned_cols=83 Identities=8% Similarity=-0.006 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC--CCHH---HHHHHHhcCCceE
Q 014065 33 YSRIHELVERAASRLVAA--GINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA--YTPD---EFEFYLSDSESKL 105 (431)
Q Consensus 33 y~el~~~~~~~a~~L~~~--gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~l~~~l~~~~~~~ 105 (431)
++.+.++.+.+-..+++. .+...+++.+...+...+++-.+++-..+..- +.+. -+.. ++...++..++++
T Consensus 136 ~~~~~~~L~~l~~~~~~~l~~~~~~~~~~~t~H~af~Y~~~~ygl~~~~~~~--~~~~~eps~~~l~~l~~~ik~~~v~~ 213 (276)
T cd01016 136 SEAYVEELDSLDAYAKKKIAEIPEQQRVLVTAHDAFGYFGRAYGFEVKGLQG--ISTDSEAGLRDINELVDLIVERKIKA 213 (276)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchhcCeEEEecCcHHHHHHHcCCeEecCcC--CCcccCCCHHHHHHHHHHHHHcCCCE
Confidence 344555555555554443 22334567777777888777666555444211 1222 2333 5667778899999
Q ss_pred EEecCCchhHHH
Q 014065 106 LLTPAEGNAAAQ 117 (431)
Q Consensus 106 ii~~~~~~~~~~ 117 (431)
||+.+...+...
T Consensus 214 if~e~~~~~~~~ 225 (276)
T cd01016 214 IFVESSVNQKSI 225 (276)
T ss_pred EEEeCCCCHHHH
Confidence 999887655433
No 377
>PRK08198 threonine dehydratase; Provisional
Probab=23.46 E-value=5.8e+02 Score=24.12 Aligned_cols=60 Identities=10% Similarity=-0.117 Sum_probs=42.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 55 GDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 55 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
++.|... ..+-.-..+.++|.+.|..++.+=|...+..-...++..+++++++.....+.
T Consensus 70 ~~~vv~a-SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vi~~~~~~~~~ 129 (404)
T PRK08198 70 ARGVVAA-SAGNHAQGVAYAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGDVYDEA 129 (404)
T ss_pred CCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHH
Confidence 3444333 34555666778899999987777777666666778899999999997654333
No 378
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=23.38 E-value=3.9e+02 Score=24.32 Aligned_cols=58 Identities=10% Similarity=-0.012 Sum_probs=35.8
Q ss_pred HHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 47 LVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 47 L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+...++++|++|+|...-+.-..++.+ +...|+..+.+..+ .+. ..++++.+++.++.
T Consensus 158 ~~~~~~~~g~~VlV~G~g~iG~~a~~~-a~~~G~~vi~~~~~--~~~-~~~a~~~Ga~~vi~ 215 (329)
T TIGR02822 158 LLRASLPPGGRLGLYGFGGSAHLTAQV-ALAQGATVHVMTRG--AAA-RRLALALGAASAGG 215 (329)
T ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHH-HHHCCCeEEEEeCC--hHH-HHHHHHhCCceecc
Confidence 334578999999999875555444444 44468765444332 333 45667777776663
No 379
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=23.38 E-value=3.3e+02 Score=21.24 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=24.6
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC
Q 014065 32 TYSRIHELVERAASRLVAAGINAGDVVALTFPN 64 (431)
Q Consensus 32 Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n 64 (431)
||.++..|+.++-..+.+.-..+++.|+++...
T Consensus 117 s~~~~~~Rv~~~~~~i~~~~~~~~~~vlvVtHg 149 (155)
T smart00855 117 SLADVVERLVRALEELIATHDKSGQNVLIVSHG 149 (155)
T ss_pred CHHHHHHHHHHHHHHHHHhcccCCCeEEEEECC
Confidence 899999999998888766533456677776654
No 380
>PRK07591 threonine synthase; Validated
Probab=23.19 E-value=3.9e+02 Score=25.51 Aligned_cols=78 Identities=8% Similarity=-0.163 Sum_probs=49.3
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
.+-||++--. ...++ ...+.|. +.| +....+-.-..+..+|.+.|..++.+=|......-...++..+++++.+
T Consensus 116 PtGSfKdRga-~~~v~-~A~~~g~---~~v-v~aSsGN~g~alA~~aa~~Gl~~~I~vP~~~~~~k~~~~~~~GA~Vi~v 189 (421)
T PRK07591 116 PTHSFKDRVV-SVALT-AARELGF---TTV-ACASTGNLANSVAAHAARAGLDSCVFIPADLEAGKIVGTLVYGPTLVAV 189 (421)
T ss_pred CccChHHHHH-HHHHH-HHHHcCC---CEE-EEeCCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEE
Confidence 4556766311 22222 2334443 345 3456666777777888889987766666555555567778999999999
Q ss_pred cCCc
Q 014065 109 PAEG 112 (431)
Q Consensus 109 ~~~~ 112 (431)
+...
T Consensus 190 ~g~~ 193 (421)
T PRK07591 190 DGNY 193 (421)
T ss_pred CCCH
Confidence 8753
No 381
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=23.10 E-value=5.4e+02 Score=23.51 Aligned_cols=11 Identities=0% Similarity=-0.082 Sum_probs=4.4
Q ss_pred HhcCCceEEEe
Q 014065 98 LSDSESKLLLT 108 (431)
Q Consensus 98 l~~~~~~~ii~ 108 (431)
++..+++++.+
T Consensus 93 ~~~~g~~~~~v 103 (356)
T cd06451 93 AERYGADVDVV 103 (356)
T ss_pred HHHhCCCeEEe
Confidence 33344444443
No 382
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=22.98 E-value=5.8e+02 Score=23.61 Aligned_cols=62 Identities=19% Similarity=0.048 Sum_probs=49.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHH
Q 014065 56 DVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAA 119 (431)
Q Consensus 56 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 119 (431)
..|+--..|+.+- ..|||-++|...+.+=|..++..-..-+...++.+++++..+.+.....
T Consensus 76 gViaaSaGNHaQG--vA~aa~~lGi~a~IvMP~~tp~~Kv~a~r~~GaeVil~g~~~dda~~~a 137 (347)
T COG1171 76 GVIAASAGNHAQG--VAYAAKRLGIKATIVMPETTPKIKVDATRGYGAEVILHGDNFDDAYAAA 137 (347)
T ss_pred ceEEecCCcHHHH--HHHHHHHhCCCEEEEecCCCcHHHHHHHHhcCCEEEEECCCHHHHHHHH
Confidence 3677777777665 4689999999888888888888888889999999999998865554433
No 383
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=22.89 E-value=2.2e+02 Score=24.18 Aligned_cols=21 Identities=10% Similarity=0.199 Sum_probs=19.4
Q ss_pred cccHHHHHHHHHHHHHHHHHc
Q 014065 30 DLTYSRIHELVERAASRLVAA 50 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~ 50 (431)
-+|+.|+.+++.++|..+.+.
T Consensus 27 lis~e~I~~~i~~LA~~I~~~ 47 (211)
T PTZ00271 27 LVTQEQVWAATAKCAKKIAED 47 (211)
T ss_pred ecCHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999884
No 384
>TIGR00060 L18_bact ribosomal protein L18, bacterial type. The archaeal and eukaryotic type rpL18 is not detectable under this model.
Probab=22.79 E-value=3.4e+02 Score=20.41 Aligned_cols=43 Identities=23% Similarity=0.267 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCC
Q 014065 6 LIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGIN 53 (431)
Q Consensus 6 l~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~ 53 (431)
+++++-+.|....-..+..+.+ .+.| +.++..+|.++++.|++
T Consensus 71 vG~~la~ra~~~gi~~vvfDrg--g~~Y---hGrv~A~a~~aRe~Gl~ 113 (114)
T TIGR00060 71 VGKLVAERLKEKGIKDVVFDRG--GYKY---HGRVAALAEAAREAGLN 113 (114)
T ss_pred HHHHHHHHHHHCCCCEEEEeCC--CCcc---hHHHHHHHHHHHHhCCC
Confidence 5677777777766555544433 3444 88999999999998874
No 385
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=22.67 E-value=5.7e+02 Score=23.04 Aligned_cols=59 Identities=14% Similarity=0.131 Sum_probs=38.3
Q ss_pred HHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEec
Q 014065 48 VAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 48 ~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
...++++|++|+|......-..++.+|....|+..+.+..+ .+. ...++..+++.++..
T Consensus 156 ~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~--~~~-~~~~~~~g~~~v~~~ 214 (338)
T PRK09422 156 KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDIN--DDK-LALAKEVGADLTINS 214 (338)
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCC--hHH-HHHHHHcCCcEEecc
Confidence 34578999999999865666777777776568776555333 333 333366677666543
No 386
>PRK09224 threonine dehydratase; Reviewed
Probab=22.45 E-value=6.5e+02 Score=24.80 Aligned_cols=53 Identities=15% Similarity=-0.031 Sum_probs=40.3
Q ss_pred ECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch
Q 014065 61 TFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN 113 (431)
Q Consensus 61 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 113 (431)
.+..+-....+.++|.+.|..++.+=|...+......++..+++++++.....
T Consensus 73 ~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~~r~~GA~Vi~~g~~~~ 125 (504)
T PRK09224 73 TASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDAVRAFGGEVVLHGDSFD 125 (504)
T ss_pred EECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHH
Confidence 34456667777888999998777766666666666788999999999986544
No 387
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=22.37 E-value=2.8e+02 Score=19.39 Aligned_cols=17 Identities=41% Similarity=0.704 Sum_probs=12.6
Q ss_pred ccccc-cceEEEECCCCC
Q 014065 336 VGRPV-GQEIAILDEIGV 352 (431)
Q Consensus 336 ~G~~~-~~~~~i~d~~~~ 352 (431)
-|.|+ +..++++|..|+
T Consensus 17 ~G~Pv~gAyVRLLD~sgE 34 (85)
T PF07210_consen 17 DGEPVGGAYVRLLDSSGE 34 (85)
T ss_pred CCcCCCCeEEEEEcCCCC
Confidence 46677 688888887654
No 388
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=22.33 E-value=2.7e+02 Score=19.16 Aligned_cols=40 Identities=8% Similarity=-0.064 Sum_probs=30.2
Q ss_pred HHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 42 RAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 42 ~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
.+...+...+..+++.|.+++..+.....+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 3445555668888999999998888877777777788865
No 389
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=22.33 E-value=1.5e+02 Score=20.01 Aligned_cols=25 Identities=16% Similarity=0.184 Sum_probs=21.7
Q ss_pred CCcccHHHHHHHHHHHHHHHHHcCC
Q 014065 28 KFDLTYSRIHELVERAASRLVAAGI 52 (431)
Q Consensus 28 ~~~~Ty~el~~~~~~~a~~L~~~gl 52 (431)
++.+|.+++.+.++++.+.+++.|.
T Consensus 28 g~~l~~~~l~~~~~~l~~~y~~~GY 52 (76)
T PF08479_consen 28 GRCLTLADLQQLADALTNYYREKGY 52 (76)
T ss_dssp TSBB-HHHHHHHHHHHHHHHHHTT-
T ss_pred CCCcCHHHHHHHHHHHHHHHHHcCc
Confidence 4799999999999999999999986
No 390
>PRK07048 serine/threonine dehydratase; Validated
Probab=22.15 E-value=5.8e+02 Score=23.18 Aligned_cols=51 Identities=10% Similarity=-0.059 Sum_probs=40.2
Q ss_pred ECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 61 TFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 61 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
....+-.-..+.++|...|..++.+=|....+.....++..++++++++..
T Consensus 77 ~aSsGN~g~alA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~~ 127 (321)
T PRK07048 77 TFSSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRY 127 (321)
T ss_pred EeCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 344577777888899999987776666666677788899999999999865
No 391
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=22.03 E-value=3.3e+02 Score=22.09 Aligned_cols=19 Identities=5% Similarity=-0.029 Sum_probs=12.5
Q ss_pred HHHHHHHHhcCCceEEEec
Q 014065 91 PDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 91 ~~~l~~~l~~~~~~~ii~~ 109 (431)
...++..|+.-.+.+|++=
T Consensus 99 lwa~EQaLrSG~c~aVL~W 117 (168)
T TIGR00623 99 VESMIRALRTGNYSVVIGW 117 (168)
T ss_pred HHHHHHHHHhCCCcEEEec
Confidence 3456677777777777763
No 392
>PRK08329 threonine synthase; Validated
Probab=21.95 E-value=5.1e+02 Score=23.92 Aligned_cols=77 Identities=12% Similarity=0.052 Sum_probs=46.3
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
.+=||++ +-+..+...+.+.|. +.|+... .+-.-..+..+|.+.|..+..+=|......-...++..+++++++
T Consensus 83 PtGSfKd--Rga~~~i~~a~~~g~---~~vv~aS-sGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v 156 (347)
T PRK08329 83 PTGSFKD--RGTYVTVAKLKEEGI---NEVVIDS-SGNAALSLALYSLSEGIKVHVFVSYNASKEKISLLSRLGAELHFV 156 (347)
T ss_pred CCcCCHH--HHHHHHHHHHHHcCC---CEEEEEC-CCcHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEE
Confidence 3455665 222233334445554 3454443 334444555666678876666656556666777889999999999
Q ss_pred cCC
Q 014065 109 PAE 111 (431)
Q Consensus 109 ~~~ 111 (431)
+.+
T Consensus 157 ~~~ 159 (347)
T PRK08329 157 EGD 159 (347)
T ss_pred CCC
Confidence 865
No 393
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=21.90 E-value=4.3e+02 Score=23.49 Aligned_cols=81 Identities=10% Similarity=0.118 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHH---HHHHHHhcCCceEEEe
Q 014065 34 SRIHELVERAASRLVAA--GINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPD---EFEFYLSDSESKLLLT 108 (431)
Q Consensus 34 ~el~~~~~~~a~~L~~~--gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~l~~~l~~~~~~~ii~ 108 (431)
+++.++...+-..+.+. .+ ++ +..+...+...+++-.|++-..+..-.--...-+.. ++...++..++++||+
T Consensus 149 ~~~~~~L~~l~~~~~~~~~~~-~~-~~~v~~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~ 226 (282)
T cd01017 149 AAYAKKLEALDQEYRAKLAKA-KG-KTFVTQHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFF 226 (282)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-CC-CeEEEecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 34444444444444442 22 33 445566667777776665544442111011222344 4566778889999999
Q ss_pred cCCchhHH
Q 014065 109 PAEGNAAA 116 (431)
Q Consensus 109 ~~~~~~~~ 116 (431)
.+......
T Consensus 227 e~~~~~~~ 234 (282)
T cd01017 227 EENASSKI 234 (282)
T ss_pred eCCCChHH
Confidence 88765443
No 394
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=21.86 E-value=6.3e+02 Score=23.37 Aligned_cols=57 Identities=19% Similarity=0.208 Sum_probs=35.3
Q ss_pred HcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc-EEEecCCCCCHHHHHHHHhcCCceEEEec
Q 014065 49 AAGINAGDVVALTFPNTVEFVIMFLAVIRARA-TAAPLNAAYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 49 ~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
..++++|++|+|.....+-.+++.+|- ..|+ .++.+.. +.++ ..+++..+++.++..
T Consensus 186 ~~~i~~g~~VlV~G~G~vG~~a~~lak-~~G~~~Vi~~~~--~~~r-~~~a~~~Ga~~~i~~ 243 (371)
T cd08281 186 TAGVRPGQSVAVVGLGGVGLSALLGAV-AAGASQVVAVDL--NEDK-LALARELGATATVNA 243 (371)
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCcEEEEcC--CHHH-HHHHHHcCCceEeCC
Confidence 357899999999876555555555554 4577 3444432 3333 334566777776643
No 395
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=21.84 E-value=3.3e+02 Score=25.37 Aligned_cols=59 Identities=7% Similarity=0.055 Sum_probs=41.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCC-----C---HHHHHHHHhcCCceEEEecC
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAY-----T---PDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-----~---~~~l~~~l~~~~~~~ii~~~ 110 (431)
+.++++|++.+.-+.|+.++.+-+.+.|..++.+.-+. + .+..+.+.+..+..+.+.+-
T Consensus 2 ~~~~~kVlValSGGVDSsvaa~LL~~~G~~V~~v~~~~~~~~~~~~d~~~a~~va~~LgIp~~vvd~ 68 (360)
T PRK14665 2 MEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAERLGIGHITYDA 68 (360)
T ss_pred CCCCCEEEEEEcCCHHHHHHHHHHHHcCCeEEEEEEecCCCCCChHHHHHHHHHHHHhCCCEEEEec
Confidence 56889999999999999999999988887555442211 2 22346667777777766653
No 396
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=21.83 E-value=3.4e+02 Score=20.10 Aligned_cols=48 Identities=13% Similarity=-0.060 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHHHH-hcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchH
Q 014065 212 FHVHGMLAGLLSSF-AAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPT 261 (431)
Q Consensus 212 ~~~~~~~~~~~~~l-~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 261 (431)
.|..|+.. +...+ ..|-.++... ...+++++.+.+.+.+++++.++.+
T Consensus 11 ~H~lG~~~-~~~~l~~~G~~V~~lg-~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 11 GHDIGKNI-VARALRDAGFEVIDLG-VDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred hhhHHHHH-HHHHHHHCCCEEEECC-CCCCHHHHHHHHHHcCCCEEEEecc
Confidence 67888766 34444 4677765544 2678999999999999988777644
No 397
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase. Flavoprotein pyridine nucleotide cytochrome reductases [] (FPNCR) catalyse the interchange of reducing equivalents between one-electron carriers and the two-electron-carrying nicotinamide dinucleotides. The enzymes include ferredoxin:NADP+reductases (FNR) [], plant and fungal NAD(P)H:nitrate reductases [, ], NADH:cytochrome b5 reductases [], NADPH:P450 reductases [], NADPH:sulphite reductases [], nitric oxide synthases [], phthalate dioxygenase reductase [], and various other flavoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3QFR_B 3FJO_A 3QFC_B 3QE2_B 3QFS_A 3QFT_A 2B5O_B 2QTZ_A 2QTL_A 2BPO_B ....
Probab=21.60 E-value=1e+02 Score=26.15 Aligned_cols=28 Identities=25% Similarity=0.242 Sum_probs=20.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhC
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRAR 79 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G 79 (431)
.++||.++|+.+|..+.+-.++..+.+.
T Consensus 42 Y~pGD~l~V~P~N~~~~V~~~l~~lgl~ 69 (219)
T PF00667_consen 42 YQPGDHLGVYPPNDPEEVERLLKRLGLD 69 (219)
T ss_dssp --TT-EEEEE-SSEHHHHHHHHHHHTSG
T ss_pred ccCCCEEEEEccCCHHHHHHHHHHhCCC
Confidence 4799999999999999888888776543
No 398
>PF01611 Filo_glycop: Filovirus glycoprotein; InterPro: IPR002561 This entry represents an extracellular domain from the envelope glycoprotein of Ebola virus sp. and Lake Victoria marburgvirus. The extracellular domain is also produced as a separate transcript that gives rise to a non-structural, secreted glycoprotein, which is produced in large amounts and has an unknown function []. Processing of the protein may be involved in viral pathogenicity [].; PDB: 3VE0_I 3CSY_O 3S88_I.
Probab=21.56 E-value=1.1e+02 Score=27.32 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=21.7
Q ss_pred ecCceEEEcCCCeEEEecccccceecCCeecc
Q 014065 390 HTGDIGYFDSDGYLHLVGRIKELINRGGNLHE 421 (431)
Q Consensus 390 ~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~ 421 (431)
+-||+++- .+|-+++.+|....+...|..+.
T Consensus 133 cpgg~AfH-k~GAFFLYDRlASTviYRG~tFa 163 (364)
T PF01611_consen 133 CPGGIAFH-KWGAFFLYDRLASTVIYRGTTFA 163 (364)
T ss_dssp --SSEEEE-TTS-EEEESSEEESS--TT-EBE
T ss_pred CCCcceee-cccceeeecccceeeEecceeee
Confidence 46888887 89999999999998888887654
No 399
>PF08845 SymE_toxin: Toxin SymE, type I toxin-antitoxin system; InterPro: IPR014944 This entry represents a SOS-induced gene whose product shows homology to the antitoxin MazE (SymE), the coding region contains a cis-encoded antisense RNA. The small antisense RNA and the gene have the all the hallmarks of a toxin-antitoxin module. The synthesis of the SymE is tightly repressed at multiple levels; at the transcriptional level by the LexA repressor, at the level of mRNA stability and translation by the SymR RNA and at the level of protein stability by the Lon protease. SymE co-purifies with ribosomes and overproduction of the protein leads to cell growth inhibition, decreased protein synthesis and increased RNA degradation. These properties are shared with several RNA endonuclease toxins of toxin-antitoxin modules. It seems probable that the SymE protein represents an evolutionary derivative of a toxin containing the AbrB fold, whose representatives are typically antitoxins. The SymE promoted cleavage of RNA cleavage may be important for the recycling of RNAs damaged under SOS-inducing conditions []. ; GO: 0003723 RNA binding, 0016788 hydrolase activity, acting on ester bonds, 0016070 RNA metabolic process, 0005737 cytoplasm
Probab=21.55 E-value=1e+02 Score=19.73 Aligned_cols=21 Identities=29% Similarity=0.346 Sum_probs=17.2
Q ss_pred HHHHHHcCCCCCCEEEEECCC
Q 014065 44 ASRLVAAGINAGDVVALTFPN 64 (431)
Q Consensus 44 a~~L~~~gl~~gd~V~i~~~n 64 (431)
..||.+.|+..|+.|-+-..+
T Consensus 30 G~WL~~aGF~~G~~v~V~v~~ 50 (57)
T PF08845_consen 30 GKWLEEAGFTIGDPVKVRVMP 50 (57)
T ss_pred hhhhHHhCCCCCCEEEEEEEC
Confidence 468999999999988876554
No 400
>PRK05593 rplR 50S ribosomal protein L18; Reviewed
Probab=21.47 E-value=3.3e+02 Score=20.52 Aligned_cols=44 Identities=20% Similarity=0.230 Sum_probs=31.3
Q ss_pred cHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCC
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGIN 53 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~ 53 (431)
.++.+|.+++....-..++.+.+ -+.| +.++..+|.++++.|++
T Consensus 73 ~vG~~la~ra~~~gi~~vvfDrg--~~~y---hGrV~a~a~~are~Gl~ 116 (117)
T PRK05593 73 KVGKLIAERAKAKGIKQVVFDRG--GYKY---HGRVKALADAAREAGLK 116 (117)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCC--CCcc---cHHHHHHHHHHHHhCCC
Confidence 36777888877776555544333 4455 88999999999998874
No 401
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=21.22 E-value=6.1e+02 Score=22.86 Aligned_cols=77 Identities=10% Similarity=0.129 Sum_probs=50.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc-H---------------------------HHHHHHHHHHHhCcEEE
Q 014065 32 TYSRIHELVERAASRLVAAGINAGDVVALTFPNT-V---------------------------EFVIMFLAVIRARATAA 83 (431)
Q Consensus 32 Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~-~---------------------------~~~~~~lA~~~~G~~~v 83 (431)
.+.+..+....+...+++.|+. ..|.|...++ . ...+-.+|+++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 3555666677788888887764 3566655443 2 24566788999999999
Q ss_pred ecCCCCCH--HHHHHHHhcCCceEEEecCCc
Q 014065 84 PLNAAYTP--DEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 84 ~l~~~~~~--~~l~~~l~~~~~~~ii~~~~~ 112 (431)
-..|.... ..+..+.++.+ +.+..++.
T Consensus 205 N~tP~~~a~~P~l~ela~~~g--vpi~GdD~ 233 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKG--VPIAGDDG 233 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHT--EEEEESSB
T ss_pred eccCccccCCHHHHHHHHHcC--CCeecchH
Confidence 88888765 67888888865 34555543
No 402
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=21.08 E-value=2.6e+02 Score=22.90 Aligned_cols=49 Identities=6% Similarity=0.057 Sum_probs=31.1
Q ss_pred cccHHHHHHHHHHHHHHHHHcCC--CCCCEEEEECCCcHHHHHHHHHHHHh
Q 014065 30 DLTYSRIHELVERAASRLVAAGI--NAGDVVALTFPNTVEFVIMFLAVIRA 78 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~gl--~~gd~V~i~~~n~~~~~~~~lA~~~~ 78 (431)
-+|..|+.+++.++|..+.+.-- .+...|.-++..+..+...+.-.+..
T Consensus 8 l~~~~~i~~~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L~~~L~~ 58 (178)
T PRK15423 8 MIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQV 58 (178)
T ss_pred ecCHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHHHHHhCC
Confidence 47999999999999999988421 12234444444455555444444443
No 403
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=20.96 E-value=4e+02 Score=20.65 Aligned_cols=80 Identities=13% Similarity=0.011 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHHHHh-cCCEEEeCCCCCCChhhHHHHHHHhcceeeecchH------HHHHHHhcccCCCCCCCCCccEE
Q 014065 212 FHVHGMLAGLLSSFA-AGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPT------IHQIVLDRHVAKPEPVYPKLRFI 284 (431)
Q Consensus 212 ~~~~~~~~~~~~~l~-~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~------~~~~l~~~~~~~~~~~~~~l~~i 284 (431)
.|..|... +...|. .|..++-.. ...+++++++...++++..+.++.. .+..+.+...... +... .+
T Consensus 13 ~HdiGk~i-v~~~l~~~GfeVi~LG-~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~g---l~~~-~v 86 (134)
T TIGR01501 13 CHAVGNKI-LDHAFTNAGFNVVNLG-VLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAG---LEGI-LL 86 (134)
T ss_pred hhhHhHHH-HHHHHHHCCCEEEECC-CCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCC---CCCC-EE
Confidence 46666544 333333 455555433 2568999999999999987665432 2344444433322 3333 36
Q ss_pred EeccCC-CcHHHHH
Q 014065 285 RSCSAS-LAPVILS 297 (431)
Q Consensus 285 ~~~g~~-~~~~~~~ 297 (431)
+.||.. ++++-.+
T Consensus 87 ivGG~~vi~~~d~~ 100 (134)
T TIGR01501 87 YVGGNLVVGKQDFP 100 (134)
T ss_pred EecCCcCcChhhhH
Confidence 778764 5555444
No 404
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=20.92 E-value=4.3e+02 Score=24.75 Aligned_cols=55 Identities=20% Similarity=0.224 Sum_probs=33.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCC--C----CCHHHHHHHHhcC------CceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNA--A----YTPDEFEFYLSDS------ESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~----~~~~~l~~~l~~~------~~~~ii~~ 109 (431)
+++||.|.+-...... ...++...|+.++.++. + .+.+.+...++.. ++++|++.
T Consensus 99 ~~~gd~Vlv~~~~h~s---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 99 CKKGDYVVLDGLAHYT---SYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred cCCCCEEEECCCchHH---HHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 4688887765332222 23456777887777754 2 4577787777643 56766655
No 405
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=20.85 E-value=6.3e+02 Score=24.20 Aligned_cols=77 Identities=12% Similarity=0.081 Sum_probs=52.7
Q ss_pred echHHHHHHHHHHHHHh---cC-CCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 181 LTQNNLAASVSNIKSVY---KL-TESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 181 ~s~~~l~~~~~~~~~~~---~~-~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
+..+.+...+..+...+ +. ..++++...++-+ ..++..+++++..|+.++..++ .+...++...+++.+++.+
T Consensus 20 ~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~--~e~~~~~~A~~~~G~~~vpl~~-~~~~~~~~~~~~~~~~~~~ 96 (452)
T PRK07445 20 YNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDP--LQFLAAFLAAVAAGCPVFLANP-HWGQQEWQQVLNLVQPDQI 96 (452)
T ss_pred cChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCC--HHHHHHHHHHHHhCcEEEeecc-CCCHHHHHHHHHhcCCCEE
Confidence 34455665555554443 44 4577787776643 2334447888889999987654 6788899999999999888
Q ss_pred ecch
Q 014065 257 TAVP 260 (431)
Q Consensus 257 ~~~p 260 (431)
....
T Consensus 97 i~~~ 100 (452)
T PRK07445 97 WGLD 100 (452)
T ss_pred EecC
Confidence 7644
No 406
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=20.82 E-value=6.2e+02 Score=23.67 Aligned_cols=13 Identities=8% Similarity=0.146 Sum_probs=6.1
Q ss_pred HHHhcCCceEEEe
Q 014065 96 FYLSDSESKLLLT 108 (431)
Q Consensus 96 ~~l~~~~~~~ii~ 108 (431)
.+.+..+++++.+
T Consensus 125 ~~~~~~g~~v~~v 137 (398)
T TIGR03392 125 MVAQQTGAKVVKL 137 (398)
T ss_pred HHHHHcCcEEEEE
Confidence 3344445555444
No 407
>PRK06815 hypothetical protein; Provisional
Probab=20.71 E-value=6.4e+02 Score=22.87 Aligned_cols=51 Identities=8% Similarity=-0.160 Sum_probs=38.1
Q ss_pred CCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 62 FPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 62 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
...+-.-..+.++|.+.|..+..+=|..........++..+++++.++.+.
T Consensus 74 aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~~ 124 (317)
T PRK06815 74 ASSGNHGQGVALAAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGGDA 124 (317)
T ss_pred ECCChHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 455666677778888999876666555555666778899999999998763
No 408
>COG3485 PcaH Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.65 E-value=4.9e+02 Score=22.35 Aligned_cols=42 Identities=19% Similarity=0.171 Sum_probs=29.9
Q ss_pred CCCCCCccccccceEEEECCCCCcCCCCceeeEEEeCCcccccccc
Q 014065 330 PHKPGSVGRPVGQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKN 375 (431)
Q Consensus 330 ~~~~~~~G~~~~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~ 375 (431)
.......|.++-.+.+|.|.+|++++.-.+ |||-.. ..|+|+
T Consensus 63 ~~~~~~~Ge~i~l~G~VlD~~G~Pv~~A~V-EiWQAd---a~GrY~ 104 (226)
T COG3485 63 LTNDKARGERILLEGRVLDGNGRPVPDALV-EIWQAD---ADGRYS 104 (226)
T ss_pred cccccCCCceEEEEEEEECCCCCCCCCCEE-EEEEcC---CCCccc
Confidence 344455666667888999999999987655 888765 445554
No 409
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=20.65 E-value=6.5e+02 Score=23.57 Aligned_cols=10 Identities=30% Similarity=0.424 Sum_probs=4.4
Q ss_pred eeeechHHHH
Q 014065 178 GVPLTQNNLA 187 (431)
Q Consensus 178 ~v~~s~~~l~ 187 (431)
|+.+.++.++
T Consensus 230 G~l~~~~~~~ 239 (401)
T PRK10874 230 GVLYGKSELL 239 (401)
T ss_pred EEEEEchHHH
Confidence 3444444443
No 410
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=20.46 E-value=1.9e+02 Score=25.21 Aligned_cols=80 Identities=6% Similarity=0.112 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHcCC-CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCC--CCCHH---HHHHHHhcCCceEE
Q 014065 33 YSRIHELVERAASRLVAAGI-NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNA--AYTPD---EFEFYLSDSESKLL 106 (431)
Q Consensus 33 y~el~~~~~~~a~~L~~~gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~~~~~---~l~~~l~~~~~~~i 106 (431)
++++.++.+.+...+.+.-- .++ +..+...+...++.-.|++-..+.. -..+ ..+.+ ++...++..++++|
T Consensus 127 ~~~~~~~L~~l~~~~~~~~~~~~~-~~~v~~h~~~~Y~~~~~gl~~~~~~--~~~~~~~ps~~~l~~l~~~ik~~~v~~i 203 (256)
T PF01297_consen 127 AEKYLKELDELDAEIKEKLAKLPG-RPVVVYHDAFQYFAKRYGLKVIGVI--EISPGEEPSPKDLAELIKLIKENKVKCI 203 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSG-GEEEEEESTTHHHHHHTT-EEEEEE--SSSSSSSS-HHHHHHHHHHHHHTT-SEE
T ss_pred HHHHHHHHHHHHHHHHHHhhcccC-CeEEEEChHHHHHHHhcCCceeeee--ccccccCCCHHHHHHHHHHhhhcCCcEE
Confidence 55677777777777765411 133 5667777788888777766655544 1222 22344 46667799999999
Q ss_pred EecCCchhH
Q 014065 107 LTPAEGNAA 115 (431)
Q Consensus 107 i~~~~~~~~ 115 (431)
|++......
T Consensus 204 ~~e~~~~~~ 212 (256)
T PF01297_consen 204 FTEPQFSSK 212 (256)
T ss_dssp EEETTS-TH
T ss_pred EecCCCChH
Confidence 998775544
No 411
>PLN02550 threonine dehydratase
Probab=20.43 E-value=9e+02 Score=24.45 Aligned_cols=80 Identities=11% Similarity=0.013 Sum_probs=50.9
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEec
Q 014065 30 DLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+-||+. +-..+++.+.-.+ ...+| .|+- ..+-....+.++|.++|..+..+=|...+......++..+++++++.
T Consensus 136 tGSFK~-RGA~n~I~~L~~e-~~~~G-VV~a--SaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~~r~~GAeVvl~g 210 (591)
T PLN02550 136 VFSFKL-RGAYNMMAKLPKE-QLDKG-VICS--SAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSVERLGATVVLVG 210 (591)
T ss_pred CCcHHH-HHHHHHHHHHHHh-cCCCC-EEEE--CCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeC
Confidence 335655 3333444432233 34555 4443 44555566677899999877777666666666778899999999998
Q ss_pred CCchh
Q 014065 110 AEGNA 114 (431)
Q Consensus 110 ~~~~~ 114 (431)
....+
T Consensus 211 ~~~de 215 (591)
T PLN02550 211 DSYDE 215 (591)
T ss_pred CCHHH
Confidence 75443
No 412
>PF02073 Peptidase_M29: Thermophilic metalloprotease (M29); InterPro: IPR000787 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M29 (aminopeptidase T family, clan M-). The protein fold of the peptidase domain and the active site residues are not known for any members of the thermophilic metallo-aminopeptidases family.; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 2AYI_D 1ZJC_A.
Probab=20.38 E-value=1.9e+02 Score=27.33 Aligned_cols=48 Identities=21% Similarity=0.245 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHc--CCCCCCEEEEECCCcHH-HH-HHHHHHHHhCcEEE
Q 014065 36 IHELVERAASRLVAA--GINAGDVVALTFPNTVE-FV-IMFLAVIRARATAA 83 (431)
Q Consensus 36 l~~~~~~~a~~L~~~--gl~~gd~V~i~~~n~~~-~~-~~~lA~~~~G~~~v 83 (431)
+..+.+++|..|.+. +++|||.|.|..+-... ++ .+.-.+.++|+..+
T Consensus 3 ~~~~l~kyA~llV~~glnvq~Gq~v~I~~~~~~~~l~r~l~~~ay~aGA~~v 54 (398)
T PF02073_consen 3 FDERLEKYAELLVKYGLNVQPGQKVLIRAPVEAAPLARALVEEAYEAGAKYV 54 (398)
T ss_dssp HHHHHHHHHHHHHHTTT---TT-EEEEEEETT-HHHHHHHHHHHHHTT-SCE
T ss_pred chHHHHHHHHHHHHhccCCCCCCEEEEEecccHHHHHHHHHHHHHHcCCCce
Confidence 567889999999986 67999999999887533 33 33445677787333
No 413
>PRK15029 arginine decarboxylase; Provisional
Probab=20.32 E-value=1e+03 Score=25.00 Aligned_cols=59 Identities=19% Similarity=0.200 Sum_probs=41.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCC---------C-----HHHHHHHHhcCC-ce---------EEE
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAY---------T-----PDEFEFYLSDSE-SK---------LLL 107 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~~-~~---------~ii 107 (431)
+++||.|. +..|+--++.- |+..+|+.++.+.|.. + .+.++..++... ++ +++
T Consensus 242 ~~~gd~Vl-v~RN~HKSv~~--al~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvl 318 (755)
T PRK15029 242 MTDNDVVV-VDRNCHKSIEQ--GLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVV 318 (755)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEE
Confidence 47888654 77888777655 9999999999998775 3 667777775542 33 666
Q ss_pred ecCCch
Q 014065 108 TPAEGN 113 (431)
Q Consensus 108 ~~~~~~ 113 (431)
+++...
T Consensus 319 t~PTY~ 324 (755)
T PRK15029 319 TNCTYD 324 (755)
T ss_pred ECCCCc
Confidence 666533
No 414
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=20.26 E-value=2.7e+02 Score=23.85 Aligned_cols=35 Identities=14% Similarity=0.014 Sum_probs=24.9
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc
Q 014065 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNT 65 (431)
Q Consensus 31 ~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~ 65 (431)
=|+.++.+|+.++-..+......++++|+++...+
T Consensus 149 Es~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHgg 183 (227)
T PRK14118 149 ENLKVTLERVLPFWEDQIAPALLSGKRVLVAAHGN 183 (227)
T ss_pred CCHHHHHHHHHHHHHHHHhhhhcCCCeEEEEeCHH
Confidence 47889999998877665543234677888887655
No 415
>PF08967 DUF1884: Domain of unknown function (DUF1884); InterPro: IPR014418 This group represents an uncharacterised conserved protein.; PDB: 2PK8_A.
Probab=20.22 E-value=1.4e+02 Score=20.63 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchh
Q 014065 35 RIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA 114 (431)
Q Consensus 35 el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 114 (431)
++.+.++..++.|+.-|+.| .|.++.|.-.+++..- ..-.+|.. .+.++..+.++|++|.....
T Consensus 9 ~il~~ie~~inELk~dG~eP--DivL~G~ef~e~~~~~-~l~~~~lk-------------vy~i~ELg~DAVvaDSk~LG 72 (85)
T PF08967_consen 9 RILELIEEKINELKEDGFEP--DIVLVGPEFYEFLSEE-VLEVSGLK-------------VYVIEELGSDAVVADSKYLG 72 (85)
T ss_dssp HHHHHHHHHHHHHHHTT------EEEE-HHHHHHHHH----EETTEE-------------EEE-GGGTTEEEEE-TTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCC--CEEEEcHHHHHHHHHH-HHHhhCce-------------EEEHHhcCCceEEEchHHhc
Confidence 46677888899999999987 5778777666665330 00011111 24578889999999988665
Q ss_pred HHH
Q 014065 115 AAQ 117 (431)
Q Consensus 115 ~~~ 117 (431)
...
T Consensus 73 ~~~ 75 (85)
T PF08967_consen 73 QLK 75 (85)
T ss_dssp TST
T ss_pred ccc
Confidence 543
No 416
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=20.20 E-value=3.1e+02 Score=18.97 Aligned_cols=49 Identities=4% Similarity=0.067 Sum_probs=32.0
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecC
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLN 86 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~ 86 (431)
..+++.++..... .+.+++.|.+++.++.....+...+.+.|..+..++
T Consensus 34 ~~ip~~~~~~~~~---------~~~~~~~vvl~c~~g~~a~~~a~~L~~~G~~v~~l~ 82 (90)
T cd01524 34 INIPLDELRDRLN---------ELPKDKEIIVYCAVGLRGYIAARILTQNGFKVKNLD 82 (90)
T ss_pred EeCCHHHHHHHHH---------hcCCCCcEEEEcCCChhHHHHHHHHHHCCCCEEEec
Confidence 4677777654322 246677899999887676666667777886444443
No 417
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=20.18 E-value=5.9e+02 Score=23.32 Aligned_cols=54 Identities=6% Similarity=-0.086 Sum_probs=33.9
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCC-CHHHHHHHHhcCCceEE
Q 014065 51 GINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAY-TPDEFEFYLSDSESKLL 106 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~i 106 (431)
++++|++|+|...-.+-.+++.+|- ..|+.++.+.... +.+. ..++++.+++.+
T Consensus 169 ~~~~g~~vlI~G~G~vG~~a~q~ak-~~G~~vi~~~~~~~~~~~-~~~~~~~Ga~~v 223 (355)
T cd08230 169 PTWNPRRALVLGAGPIGLLAALLLR-LRGFEVYVLNRRDPPDPK-ADIVEELGATYV 223 (355)
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHH-HcCCeEEEEecCCCCHHH-HHHHHHcCCEEe
Confidence 4679999999976455555555544 4687766665432 3333 346667787764
No 418
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=20.11 E-value=5.1e+02 Score=23.98 Aligned_cols=71 Identities=10% Similarity=0.040 Sum_probs=37.8
Q ss_pred HHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC----CCCCChhhHHHHHHHhc----ceeeecchHHHH
Q 014065 193 IKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA----AGRFSASTFWQDMIKYN----ATWYTAVPTIHQ 264 (431)
Q Consensus 193 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~~~i~~~~----~t~~~~~p~~~~ 264 (431)
....+++.+++.++...-.+.. .....+..|..+++.+ ....+++.+-+.|.+.. ++++++.|.-+.
T Consensus 56 al~~l~~~~gdeVi~p~~t~~~-----~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h~~G~~~d~~ 130 (363)
T PF01041_consen 56 ALRALGLGPGDEVIVPAYTFPA-----TASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVHLFGNPADMD 130 (363)
T ss_dssp HHHHTTGGTTSEEEEESSS-TH-----HHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE-GGGB---HH
T ss_pred HHHhcCCCcCceEecCCCcchH-----HHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEecCCCCcccHH
Confidence 3455788888887766333222 1556688899999865 22336666666665432 455555665555
Q ss_pred HHHh
Q 014065 265 IVLD 268 (431)
Q Consensus 265 ~l~~ 268 (431)
.+.+
T Consensus 131 ~i~~ 134 (363)
T PF01041_consen 131 AIRA 134 (363)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
Done!