Query 014065
Match_columns 431
No_of_seqs 177 out of 1426
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 04:52:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014065.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014065hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 100.0 6.8E-72 2.3E-76 544.7 37.3 421 3-429 21-453 (536)
2 3etc_A AMP-binding protein; ad 100.0 3.1E-71 1.1E-75 543.2 40.9 421 4-429 55-494 (580)
3 3o83_A Peptide arylation enzym 100.0 7.1E-72 2.4E-76 545.2 34.7 421 3-429 29-458 (544)
4 3r44_A Fatty acyl COA syntheta 100.0 1.9E-71 6.6E-76 538.8 37.2 417 2-429 14-432 (517)
5 1mdb_A 2,3-dihydroxybenzoate-A 100.0 2.6E-71 9E-76 540.6 37.2 418 2-429 23-449 (539)
6 4fuq_A Malonyl COA synthetase; 100.0 6.8E-71 2.3E-75 533.2 38.7 410 8-429 4-418 (503)
7 3rix_A Luciferase, luciferin 4 100.0 7.4E-71 2.5E-75 539.0 39.3 421 2-429 18-458 (550)
8 3g7s_A Long-chain-fatty-acid-- 100.0 5E-71 1.7E-75 540.1 37.3 419 2-429 17-458 (549)
9 1v25_A Long-chain-fatty-acid-C 100.0 9.9E-71 3.4E-75 536.7 34.9 419 3-429 17-454 (541)
10 3ivr_A Putative long-chain-fat 100.0 3.7E-70 1.3E-74 529.7 37.4 412 2-429 4-419 (509)
11 1t5h_X 4-chlorobenzoyl COA lig 100.0 1.1E-69 3.9E-74 525.3 38.4 409 4-429 2-421 (504)
12 2d1s_A Luciferase, luciferin 4 100.0 1.2E-69 4E-74 529.7 38.6 418 4-429 25-460 (548)
13 4dg8_A PA1221; ANL superfamily 100.0 5.6E-70 1.9E-74 537.1 35.5 401 3-429 26-438 (620)
14 3c5e_A Acyl-coenzyme A synthet 100.0 1.6E-69 5.3E-74 530.5 38.4 417 5-429 39-475 (570)
15 4gr5_A Non-ribosomal peptide s 100.0 1.3E-69 4.4E-74 532.2 34.8 403 3-429 74-488 (570)
16 2v7b_A Benzoate-coenzyme A lig 100.0 2.2E-69 7.6E-74 526.7 36.1 417 5-429 25-448 (529)
17 1pg4_A Acetyl-COA synthetase; 100.0 4.6E-69 1.6E-73 535.0 37.8 423 5-429 77-536 (652)
18 3fce_A D-alanine--poly(phospho 100.0 2.7E-69 9.2E-74 524.0 33.8 409 4-429 1-418 (512)
19 1amu_A GRSA, gramicidin synthe 100.0 5.7E-69 2E-73 525.8 33.8 403 3-429 38-449 (563)
20 1ry2_A Acetyl-coenzyme A synth 100.0 1.7E-68 5.7E-73 531.1 36.6 425 4-429 82-545 (663)
21 3rg2_A Enterobactin synthase c 100.0 2.5E-68 8.6E-73 527.5 36.1 419 2-429 25-453 (617)
22 3e7w_A D-alanine--poly(phospho 100.0 4.4E-68 1.5E-72 515.1 35.2 407 4-429 1-417 (511)
23 3l8c_A D-alanine--poly(phospho 100.0 1.6E-68 5.6E-73 519.9 30.8 411 1-429 1-422 (521)
24 3tsy_A Fusion protein 4-coumar 100.0 2.4E-67 8.3E-72 546.2 37.9 422 3-429 60-500 (979)
25 3kxw_A Saframycin MX1 syntheta 100.0 4.3E-68 1.5E-72 525.0 29.9 418 2-429 9-477 (590)
26 3ipl_A 2-succinylbenzoate--COA 100.0 5.5E-68 1.9E-72 513.7 29.7 407 4-429 1-417 (501)
27 3ite_A SIDN siderophore synthe 100.0 1.7E-66 5.7E-71 510.1 32.2 407 2-429 18-446 (562)
28 3gqw_A Fatty acid AMP ligase; 100.0 2.5E-66 8.7E-71 511.3 33.6 415 3-429 20-480 (576)
29 3nyq_A Malonyl-COA ligase; A/B 100.0 6.3E-67 2.2E-71 505.4 22.3 395 4-429 22-425 (505)
30 3t5a_A Long-chain-fatty-acid-- 100.0 7.8E-65 2.7E-69 489.7 30.0 395 1-408 21-480 (480)
31 2vsq_A Surfactin synthetase su 100.0 3.2E-64 1.1E-68 535.1 33.0 407 3-429 463-880 (1304)
32 3qov_A Phenylacetate-coenzyme 100.0 2E-42 6.7E-47 328.7 17.2 252 158-429 82-350 (436)
33 4gs5_A Acyl-COA synthetase (AM 100.0 3E-42 1E-46 317.4 13.9 231 160-427 36-267 (358)
34 2y4o_A Phenylacetate-coenzyme 100.0 5E-41 1.7E-45 319.7 16.0 253 157-429 88-354 (443)
35 2y27_A Phenylacetate-coenzyme 100.0 2.6E-40 8.9E-45 314.2 19.4 252 158-429 87-352 (437)
36 3hgu_A EHPF; phenazine, antibi 100.0 5.7E-32 2E-36 251.0 16.8 235 158-418 88-368 (369)
37 4eql_A 4-substituted benzoates 98.9 2.6E-09 8.8E-14 101.8 9.9 128 278-429 296-444 (581)
38 4b2g_A GH3-1 auxin conjugating 98.9 2.4E-09 8.1E-14 102.2 8.8 147 259-429 277-456 (609)
39 4epl_A Jasmonic acid-amido syn 98.9 1.5E-09 5.1E-14 103.2 5.2 129 278-429 301-451 (581)
40 2y27_A Phenylacetate-coenzyme 93.6 0.59 2E-05 43.4 11.4 90 29-119 108-199 (437)
41 2y4o_A Phenylacetate-coenzyme 93.3 0.66 2.2E-05 43.2 11.4 89 29-118 110-200 (443)
42 3qov_A Phenylacetate-coenzyme 93.3 0.62 2.1E-05 43.2 11.0 90 29-119 104-195 (436)
43 3ivr_A Putative long-chain-fat 86.4 14 0.00049 34.7 14.2 85 179-266 30-117 (509)
44 3ipl_A 2-succinylbenzoate--COA 84.7 8.1 0.00028 36.3 11.5 96 17-116 161-265 (501)
45 3rix_A Luciferase, luciferin 4 84.6 6.7 0.00023 37.5 11.0 88 179-269 49-139 (550)
46 1v25_A Long-chain-fatty-acid-C 84.6 24 0.00081 33.5 14.8 87 178-267 45-134 (541)
47 3c5e_A Acyl-coenzyme A synthet 83.9 25 0.00086 33.7 14.7 102 159-267 56-161 (570)
48 3ni2_A 4-coumarate:COA ligase; 83.7 12 0.00041 35.6 12.3 98 159-266 35-135 (536)
49 3g7s_A Long-chain-fatty-acid-- 83.2 18 0.00063 34.4 13.4 104 160-267 33-139 (549)
50 3hgu_A EHPF; phenazine, antibi 81.9 3.5 0.00012 37.0 7.5 82 29-112 109-215 (369)
51 4gs5_A Acyl-COA synthetase (AM 80.7 7.9 0.00027 34.6 9.3 96 14-115 32-136 (358)
52 1mdb_A 2,3-dihydroxybenzoate-A 79.5 14 0.00048 35.1 11.1 86 29-118 200-288 (539)
53 2d1s_A Luciferase, luciferin 4 78.2 7.3 0.00025 37.2 8.6 96 19-116 192-297 (548)
54 3o83_A Peptide arylation enzym 77.3 15 0.0005 35.0 10.5 96 18-117 190-296 (544)
55 1t5h_X 4-chlorobenzoyl COA lig 76.9 25 0.00086 32.9 11.9 85 179-266 28-117 (504)
56 3etc_A AMP-binding protein; ad 76.2 24 0.00081 33.9 11.7 96 159-261 69-167 (580)
57 1amu_A GRSA, gramicidin synthe 76.1 32 0.0011 32.8 12.5 85 179-266 63-150 (563)
58 2v7b_A Benzoate-coenzyme A lig 75.8 16 0.00054 34.6 10.3 85 179-266 47-134 (529)
59 3r44_A Fatty acyl COA syntheta 74.1 24 0.00083 33.2 11.0 96 160-265 30-128 (517)
60 3t5a_A Long-chain-fatty-acid-- 74.1 42 0.0014 31.0 12.6 107 159-268 37-148 (480)
61 1pg4_A Acetyl-COA synthetase; 73.1 38 0.0013 33.0 12.4 95 160-260 90-187 (652)
62 3tbh_A O-acetyl serine sulfhyd 72.3 16 0.00054 32.3 8.6 65 47-111 62-127 (334)
63 3rg2_A Enterobactin synthase c 71.5 32 0.0011 33.3 11.4 97 18-118 183-290 (617)
64 1ry2_A Acetyl-coenzyme A synth 71.2 37 0.0013 33.2 11.9 97 159-261 95-195 (663)
65 4gr5_A Non-ribosomal peptide s 70.9 41 0.0014 32.1 11.9 80 180-262 100-182 (570)
66 4fuq_A Malonyl COA synthetase; 70.5 25 0.00086 33.0 10.2 80 180-262 28-110 (503)
67 3tsy_A Fusion protein 4-coumar 67.9 23 0.00077 36.7 9.9 96 159-264 74-172 (979)
68 3kxw_A Saframycin MX1 syntheta 67.2 14 0.00049 35.4 7.9 95 18-115 166-273 (590)
69 3vc3_A Beta-cyanoalnine syntha 66.9 23 0.0008 31.3 8.5 81 30-111 62-142 (344)
70 3fce_A D-alanine--poly(phospho 63.9 13 0.00045 35.0 6.8 93 18-113 143-246 (512)
71 3e7w_A D-alanine--poly(phospho 63.5 13 0.00046 34.9 6.7 94 18-114 142-246 (511)
72 3gqw_A Fatty acid AMP ligase; 58.3 60 0.002 30.8 10.4 86 179-267 48-143 (576)
73 3ezx_A MMCP 1, monomethylamine 57.8 66 0.0022 26.1 9.0 92 203-298 93-194 (215)
74 3nyq_A Malonyl-COA ligase; A/B 57.5 42 0.0015 31.4 9.0 95 18-117 154-258 (505)
75 2q3b_A Cysteine synthase A; py 56.0 83 0.0028 27.2 10.0 79 30-111 43-122 (313)
76 1zsy_A Mitochondrial 2-enoyl t 55.1 80 0.0027 27.9 10.0 78 30-108 139-222 (357)
77 3l8c_A D-alanine--poly(phospho 54.3 37 0.0013 31.9 8.1 78 180-260 29-109 (521)
78 1ve1_A O-acetylserine sulfhydr 53.3 1.1E+02 0.0037 26.3 10.7 64 47-111 51-117 (304)
79 3ite_A SIDN siderophore synthe 53.2 1.4E+02 0.0048 28.2 12.0 97 159-260 33-134 (562)
80 2egu_A Cysteine synthase; O-ac 53.2 89 0.0031 26.9 9.8 64 47-111 56-120 (308)
81 2pqm_A Cysteine synthase; OASS 53.0 86 0.0029 27.6 9.7 63 48-111 70-133 (343)
82 1z7w_A Cysteine synthase; tran 52.4 62 0.0021 28.2 8.7 64 48-111 58-122 (322)
83 4aec_A Cysteine synthase, mito 51.8 61 0.0021 29.7 8.6 63 48-110 166-229 (430)
84 4eez_A Alcohol dehydrogenase 1 50.9 49 0.0017 29.0 7.9 78 30-110 136-216 (348)
85 4h1h_A LMO1638 protein; MCCF-l 49.4 64 0.0022 28.2 8.2 61 51-111 8-87 (327)
86 4dg8_A PA1221; ANL superfamily 49.2 92 0.0032 30.1 10.1 77 180-259 52-131 (620)
87 1y7l_A O-acetylserine sulfhydr 49.2 1E+02 0.0034 26.7 9.5 64 47-111 53-117 (316)
88 2v03_A Cysteine synthase B; py 48.5 1.3E+02 0.0045 25.8 10.6 64 47-111 52-116 (303)
89 1vjk_A Molybdopterin convertin 47.5 38 0.0013 23.4 5.2 46 3-63 36-94 (98)
90 3ju7_A Putative PLP-dependent 47.0 1.2E+02 0.004 27.0 9.8 61 46-109 69-136 (377)
91 3sr3_A Microcin immunity prote 46.7 75 0.0026 27.9 8.2 61 51-111 9-88 (336)
92 3tqh_A Quinone oxidoreductase; 45.4 65 0.0022 27.9 7.7 75 30-109 125-203 (321)
93 4ej6_A Putative zinc-binding d 45.2 1.3E+02 0.0045 26.7 9.8 60 45-108 173-233 (370)
94 3pc3_A CG1753, isoform A; CBS, 45.0 90 0.0031 29.5 9.0 62 48-110 105-167 (527)
95 3tla_A MCCF; serine protease, 44.8 80 0.0028 28.2 8.1 61 51-111 39-118 (371)
96 4a2c_A Galactitol-1-phosphate 44.3 1.4E+02 0.0047 26.1 9.7 65 43-111 149-214 (346)
97 1eg5_A Aminotransferase; PLP-d 42.7 1.3E+02 0.0043 26.4 9.4 56 53-109 87-146 (384)
98 1pl8_A Human sorbitol dehydrog 41.7 1.8E+02 0.0062 25.5 10.4 75 30-109 145-223 (356)
99 3ri6_A O-acetylhomoserine sulf 40.8 2.1E+02 0.0072 26.0 12.1 55 52-108 118-173 (430)
100 3l6b_A Serine racemase; pyrido 40.6 55 0.0019 28.9 6.4 57 55-112 76-132 (346)
101 4e5s_A MCCFLIKE protein (BA_56 40.0 85 0.0029 27.5 7.4 61 51-111 8-87 (331)
102 3dwg_A Cysteine synthase B; su 39.1 1.9E+02 0.0065 25.1 9.6 64 47-111 64-128 (325)
103 3krt_A Crotonyl COA reductase; 38.3 1.2E+02 0.0042 27.8 8.7 76 30-109 198-280 (456)
104 3dzz_A Putative pyridoxal 5'-p 38.3 1.5E+02 0.005 26.1 9.1 55 52-109 106-167 (391)
105 1h2b_A Alcohol dehydrogenase; 38.0 1.3E+02 0.0043 26.6 8.5 78 30-110 154-239 (359)
106 2cf5_A Atccad5, CAD, cinnamyl 36.7 94 0.0032 27.4 7.4 77 30-109 152-232 (357)
107 4h27_A L-serine dehydratase/L- 36.6 92 0.0031 27.7 7.2 56 60-115 97-152 (364)
108 3two_A Mannitol dehydrogenase; 36.3 1.4E+02 0.0047 26.2 8.4 74 30-107 149-225 (348)
109 2jtq_A Phage shock protein E; 36.1 90 0.0031 20.4 5.7 47 27-80 20-66 (85)
110 3jv7_A ADH-A; dehydrogenase, n 36.1 1.7E+02 0.0058 25.5 9.0 78 31-111 143-225 (345)
111 2ayi_A Aminopeptidase T; metal 35.4 73 0.0025 28.9 6.4 51 36-86 4-58 (408)
112 1mdo_A ARNB aminotransferase; 34.8 1.4E+02 0.0046 26.4 8.3 59 48-110 72-135 (393)
113 2q5w_D Molybdopterin convertin 34.8 35 0.0012 22.1 3.2 45 3-63 25-73 (77)
114 3qwb_A Probable quinone oxidor 34.6 2.2E+02 0.0077 24.5 9.9 55 51-109 145-200 (334)
115 3goh_A Alcohol dehydrogenase, 33.6 2.3E+02 0.0077 24.2 9.8 74 29-107 114-190 (315)
116 1e3j_A NADP(H)-dependent ketos 33.5 2.4E+02 0.0083 24.6 9.9 74 30-108 142-218 (352)
117 1o58_A O-acetylserine sulfhydr 33.4 2.3E+02 0.0078 24.2 9.3 62 47-111 58-120 (303)
118 2e7j_A SEP-tRNA:Cys-tRNA synth 33.3 2.4E+02 0.0082 24.4 9.8 55 52-109 90-154 (371)
119 1zjc_A Aminopeptidase AMPS; me 33.1 1.1E+02 0.0037 27.9 7.1 51 36-86 7-61 (418)
120 3s2e_A Zinc-containing alcohol 33.0 1.1E+02 0.0037 26.7 7.1 78 29-110 138-218 (340)
121 4b7c_A Probable oxidoreductase 32.8 1.6E+02 0.0056 25.5 8.3 58 48-108 143-201 (336)
122 4a0s_A Octenoyl-COA reductase/ 32.4 1.6E+02 0.0055 26.9 8.4 75 30-108 190-271 (447)
123 3po0_A Small archaeal modifier 31.7 63 0.0021 21.6 4.2 47 3-64 27-86 (89)
124 4d9i_A Diaminopropionate ammon 30.9 2.9E+02 0.01 24.7 10.5 60 54-114 110-170 (398)
125 1gu7_A Enoyl-[acyl-carrier-pro 30.7 1.2E+02 0.0039 26.8 7.0 79 30-109 138-223 (364)
126 2rkb_A Serine dehydratase-like 30.4 1.3E+02 0.0046 25.9 7.2 58 55-113 54-111 (318)
127 2vsq_A Surfactin synthetase su 30.2 2E+02 0.0068 30.8 9.7 80 180-262 489-571 (1304)
128 1o69_A Aminotransferase; struc 30.2 1.5E+02 0.0053 26.2 7.8 59 49-110 66-130 (394)
129 1elu_A L-cysteine/L-cystine C- 29.6 1.9E+02 0.0066 25.3 8.4 57 52-109 98-161 (390)
130 2e18_A NH(3)-dependent NAD(+) 29.4 1.4E+02 0.0048 24.8 6.9 74 31-110 4-83 (257)
131 3ss7_X D-serine dehydratase; t 29.2 3.2E+02 0.011 25.0 9.7 58 58-115 162-219 (442)
132 2duw_A Putative COA-binding pr 29.2 1E+02 0.0035 23.0 5.4 21 1-26 1-21 (145)
133 3ijw_A Aminoglycoside N3-acety 29.1 41 0.0014 28.4 3.4 24 41-64 18-41 (268)
134 1ofu_X SULA, hypothetical prot 28.8 1.6E+02 0.0056 21.1 7.5 52 43-94 46-99 (119)
135 3b8x_A WBDK, pyridoxamine 5-ph 28.7 2.6E+02 0.0089 24.6 9.1 55 51-109 76-135 (390)
136 1yqd_A Sinapyl alcohol dehydro 28.5 1.9E+02 0.0065 25.5 8.0 61 45-108 177-238 (366)
137 3a2k_A TRNA(Ile)-lysidine synt 28.5 2.5E+02 0.0086 25.8 9.0 70 42-111 4-87 (464)
138 3a2b_A Serine palmitoyltransfe 28.3 3.1E+02 0.01 24.1 10.0 55 52-110 124-181 (398)
139 4hvk_A Probable cysteine desul 28.2 1.8E+02 0.0061 25.3 7.9 56 53-109 86-145 (382)
140 1p5j_A L-serine dehydratase; l 27.8 1.5E+02 0.0051 26.4 7.1 58 55-113 93-150 (372)
141 3isl_A Purine catabolism prote 27.3 2.1E+02 0.0073 25.3 8.3 57 52-109 83-143 (416)
142 3fpc_A NADP-dependent alcohol 27.3 1.2E+02 0.0042 26.5 6.5 76 30-109 139-218 (352)
143 4eb5_A Probable cysteine desul 27.2 1.4E+02 0.0047 26.2 6.9 12 54-65 87-98 (382)
144 1oft_A SULA, hypothetical prot 27.1 1.9E+02 0.0063 22.2 6.4 37 44-80 89-125 (161)
145 3sma_A FRBF; N-acetyl transfer 27.0 47 0.0016 28.4 3.4 29 29-64 20-48 (286)
146 2nyg_A YOKD protein; PFAM02522 27.0 47 0.0016 28.2 3.4 23 42-64 17-39 (273)
147 3aey_A Threonine synthase; PLP 26.7 1.5E+02 0.0052 26.1 6.9 53 60-112 81-134 (351)
148 1y81_A Conserved hypothetical 26.5 1.2E+02 0.0041 22.4 5.3 48 56-104 71-118 (138)
149 2d1f_A Threonine synthase; ami 26.4 1.8E+02 0.0061 25.7 7.3 51 62-112 91-142 (360)
150 2c81_A Glutamine-2-deoxy-scyll 26.3 1.6E+02 0.0055 26.3 7.3 59 47-109 74-137 (418)
151 3kax_A Aminotransferase, class 26.1 3.1E+02 0.011 23.8 9.1 54 52-109 103-163 (383)
152 1rjw_A ADH-HT, alcohol dehydro 25.8 2.2E+02 0.0075 24.7 7.8 74 30-107 137-213 (339)
153 1vj0_A Alcohol dehydrogenase, 25.6 3.5E+02 0.012 23.9 10.2 76 30-109 167-247 (380)
154 3uog_A Alcohol dehydrogenase; 25.4 3.4E+02 0.012 23.7 10.7 76 29-108 160-239 (363)
155 1y80_A Predicted cobalamin bin 25.3 2.1E+02 0.0071 22.8 7.0 89 204-296 90-186 (210)
156 2bkw_A Alanine-glyoxylate amin 25.2 3.4E+02 0.011 23.6 9.6 56 53-109 84-144 (385)
157 2z9v_A Aspartate aminotransfer 25.1 2.2E+02 0.0076 24.9 7.9 58 52-110 80-142 (392)
158 3ndn_A O-succinylhomoserine su 24.9 3.8E+02 0.013 24.0 11.6 55 52-108 117-172 (414)
159 1y80_A Predicted cobalamin bin 24.8 2.6E+02 0.009 22.2 8.4 56 56-111 89-148 (210)
160 3zrp_A Serine-pyruvate aminotr 24.7 2.5E+02 0.0086 24.4 8.2 58 52-110 74-135 (384)
161 2zsj_A Threonine synthase; PLP 24.5 1.6E+02 0.0054 25.9 6.6 53 60-112 83-136 (352)
162 2j8z_A Quinone oxidoreductase; 24.5 3.2E+02 0.011 23.8 8.8 74 30-107 134-212 (354)
163 1zl0_A Hypothetical protein PA 24.3 2E+02 0.0068 24.9 6.9 61 51-111 13-89 (311)
164 1wy5_A TILS, hypothetical UPF0 24.3 3.4E+02 0.012 23.3 9.7 71 40-110 8-92 (317)
165 4dup_A Quinone oxidoreductase; 24.2 3.6E+02 0.012 23.5 9.2 76 30-109 139-219 (353)
166 2z61_A Probable aspartate amin 24.2 2.8E+02 0.0094 24.1 8.3 51 52-108 110-160 (370)
167 1fm0_D Molybdopterin convertin 23.8 1E+02 0.0034 20.0 4.0 14 50-63 64-77 (81)
168 3uko_A Alcohol dehydrogenase c 23.5 3E+02 0.01 24.3 8.4 77 30-110 165-246 (378)
169 3lvm_A Cysteine desulfurase; s 23.5 3.8E+02 0.013 23.7 9.3 56 53-109 111-170 (423)
170 2ch1_A 3-hydroxykynurenine tra 23.3 2.9E+02 0.0098 24.2 8.3 57 52-109 90-150 (396)
171 2d59_A Hypothetical protein PH 23.3 1.8E+02 0.0063 21.5 5.9 48 56-104 79-126 (144)
172 4dq6_A Putative pyridoxal phos 22.8 2.6E+02 0.009 24.4 8.0 52 52-108 111-170 (391)
173 3nnk_A Ureidoglycine-glyoxylat 22.5 3.1E+02 0.01 24.2 8.4 69 40-110 74-146 (411)
174 3frk_A QDTB; aminotransferase, 22.4 3.2E+02 0.011 23.8 8.4 61 45-109 66-131 (373)
175 1d2f_A MALY protein; aminotran 22.4 3.4E+02 0.012 23.7 8.6 54 52-108 108-168 (390)
176 1c7n_A Cystalysin; transferase 22.2 3.1E+02 0.011 24.1 8.3 53 53-108 111-170 (399)
177 3kgw_A Alanine-glyoxylate amin 22.0 3E+02 0.01 23.9 8.2 57 52-109 95-155 (393)
178 1p0f_A NADP-dependent alcohol 22.0 2.6E+02 0.0089 24.6 7.6 57 49-109 186-243 (373)
179 1t3i_A Probable cysteine desul 21.9 2E+02 0.007 25.4 7.1 57 52-109 115-176 (420)
180 2h6e_A ADH-4, D-arabinose 1-de 21.8 2.6E+02 0.0089 24.3 7.5 53 51-107 168-221 (344)
181 2cb1_A O-acetyl homoserine sul 21.8 2.9E+02 0.01 24.6 8.1 54 52-108 92-146 (412)
182 3f9t_A TDC, L-tyrosine decarbo 21.8 3.9E+02 0.013 23.1 9.1 52 53-107 121-176 (397)
183 2a3d_A Protein (de novo three- 21.6 92 0.0031 18.7 2.9 21 32-52 3-23 (73)
184 1kol_A Formaldehyde dehydrogen 21.4 2.9E+02 0.01 24.6 7.9 56 46-105 177-233 (398)
185 1b9h_A AHBA synthase, protein 21.2 2.7E+02 0.0091 24.4 7.6 56 48-107 71-131 (388)
186 3ohp_A Hypoxanthine phosphorib 21.1 2.1E+02 0.0071 22.2 6.0 21 30-50 8-28 (177)
187 2boy_A 3-chlorocatechol 1,2-di 21.0 2.1E+02 0.0071 23.9 6.1 31 335-366 98-128 (254)
188 1toa_A Tromp-1, protein (perip 21.0 1.3E+02 0.0045 26.0 5.2 82 33-116 172-260 (313)
189 1jbq_A B, cystathionine beta-s 20.9 4.2E+02 0.014 24.2 8.7 61 49-110 154-215 (435)
190 1wkv_A Cysteine synthase; homo 20.7 4E+02 0.014 23.8 8.5 56 53-109 143-199 (389)
191 3ffy_A Putative tetrapyrrole ( 20.7 42 0.0015 24.0 1.7 59 4-64 53-113 (115)
192 1jvb_A NAD(H)-dependent alcoho 20.6 3.3E+02 0.011 23.6 7.9 76 30-108 143-222 (347)
193 2d8a_A PH0655, probable L-thre 20.5 3.1E+02 0.011 23.8 7.8 73 30-108 142-218 (348)
194 2vn8_A Reticulon-4-interacting 20.3 4.4E+02 0.015 23.1 9.1 75 30-109 151-234 (375)
195 3gaz_A Alcohol dehydrogenase s 20.3 4.2E+02 0.014 22.9 10.2 71 30-105 122-197 (343)
196 3e19_A FEOA; transcriptional r 20.3 95 0.0032 20.0 3.2 22 41-62 25-46 (77)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=6.8e-72 Score=544.65 Aligned_cols=421 Identities=30% Similarity=0.420 Sum_probs=359.6
Q ss_pred cccHHHHHHHHHHhcCCcceEEec-CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVS-GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
++|+.++|.++++++|+++|+++. +++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 21 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~la~~~~Gav 100 (536)
T 3ni2_A 21 NLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAI 100 (536)
T ss_dssp SCCHHHHHTTTGGGSTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCE
T ss_pred CCcHHHHHHHHhhcCCCceEEEECCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCE
Confidence 578999999999999999999975 3579999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccccc-chhhhhhhccccccccccccCCCCC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA-DSELTLSLAHSESDTNAISKLTNDP 160 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (431)
++|++|.++.+++.++++.++++++|++....+.+............. +... .....+..... ......+.....+
T Consensus 101 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (536)
T 3ni2_A 101 ITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESDVKVMC--VDSAPDGCLHFSELTQ-ADENEAPQVDISP 177 (536)
T ss_dssp EEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHHTCEEEE--SSCCCTTCEETHHHHT-SCGGGCCCCCCCT
T ss_pred EeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhcCceEEE--ecCCCCCccCHHHHhh-ccccccccCCCCc
Confidence 999999999999999999999999999998777766655443322111 1111 00001111100 1111223344578
Q ss_pred CCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH----HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 161 SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS----VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 161 ~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
+++++++|||||||.||+|.++|.++++.+..... .+++.+++++++.+|++|.+++...++.++..|+++++.+
T Consensus 178 ~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~- 256 (536)
T 3ni2_A 178 DDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMP- 256 (536)
T ss_dssp TSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHHTHHHHHHHTCCEEECS-
T ss_pred cCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHHHHHHHHhcCCEEEEcC-
Confidence 99999999999999999999999999887765543 3467889999999999999999887899999999999987
Q ss_pred CCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCccc
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTE 315 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE 315 (431)
.+++..+++.++++++|++.++|+++..+++..... ..+++++|.+++||+++++++.+.+++.+ ++++++.||+||
T Consensus 257 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE 334 (536)
T 3ni2_A 257 -KFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLD-KHDLSSLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYGMTE 334 (536)
T ss_dssp -SCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGG-GSCCTTCCEEEEESSCCCHHHHHHHHHHCTTSEEEEEEECGG
T ss_pred -CCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccc-cCCCccceEEEECCCCCCHHHHHHHHHHCCCCCccccccccc
Confidence 789999999999999999999999999998876432 34578999999999999999999999999 899999999999
Q ss_pred ccCcccCCCC--CCCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cCCcee
Q 014065 316 ATHLMSSNPL--PEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFH 390 (431)
Q Consensus 316 ~~~~~~~~~~--~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~ 390 (431)
++++++.+.. .......++++|+|+ +++++|+| ++|++++.|+.|||+++|++++.||+++++.+++.| .+|||+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~~g~~~ 414 (536)
T 3ni2_A 335 AGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLH 414 (536)
T ss_dssp GSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEE
T ss_pred cchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCCCccEEEEeCcccchhhcCChhHHHhhccCCCceE
Confidence 9976554321 122345678999999 89999999 569999999999999999999999999999999988 579999
Q ss_pred cCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 391 TGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 391 TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 415 TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 453 (536)
T 3ni2_A 415 TGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALL 453 (536)
T ss_dssp EEEEEEECTTSCEEEEEECSCCEEETTEEECHHHHHHHH
T ss_pred cccEEEEcCCceEEEEecccceEEECCEEECHHHHHHHH
Confidence 999999999999999999999999999999999999863
No 2
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=3.1e-71 Score=543.25 Aligned_cols=421 Identities=22% Similarity=0.341 Sum_probs=355.2
Q ss_pred ccHH-HHHHHHHHhcCCcceEEec----CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHh
Q 014065 4 VTLI-GLLNQVIDQFSSKRALSVS----GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRA 78 (431)
Q Consensus 4 ~tl~-~~l~~~a~~~p~~~a~~~~----~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 78 (431)
.|+. ++|+++|+++|+++|+++. +++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++
T Consensus 55 ~n~~~~~l~~~a~~~pd~~Al~~~~~~g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~~~~lA~~~~ 134 (580)
T 3etc_A 55 FNFAYDVVDVYARDSPEKLAMIWCDDYGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFWYCMLGLHKL 134 (580)
T ss_dssp CCHHHHTHHHHHHHCTTCEEEEEEESSSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhhCCCCEEEEEEcCCCCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhC
Confidence 4555 9999999999999999963 2368999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch--hHHHHHHHhcCcc-ccccccccc--chhhhhhhc--cccc-cc
Q 014065 79 RATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN--AAAQAAASKLNIS-HATATLLDA--DSELTLSLA--HSES-DT 150 (431)
Q Consensus 79 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~--~~~~-~~ 150 (431)
|++++|+++.++.+++.++++.++++++|++.+.. ..+.......... ...+.+... .....+... .... ..
T Consensus 135 Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (580)
T 3etc_A 135 GAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECGDIPLKKAKVGGDVLEGWIDFRKELEESSPIFE 214 (580)
T ss_dssp TCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHCSCCCEEEEESSSCCTTCEEHHHHHHHSCSCCC
T ss_pred CEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhhCCCcceEEEEeCCccccccccHHHHHhhCCcccc
Confidence 99999999999999999999999999999988754 4444444333211 111111111 000011100 0000 00
Q ss_pred cccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCE
Q 014065 151 NAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAA 230 (431)
Q Consensus 151 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~ 230 (431)
.........++++++++|||||||.||+|.++|.+++..+.......++.+++++++..|++|..+++..++.++..|++
T Consensus 215 ~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~ 294 (580)
T 3etc_A 215 RPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQNVEDDGLHYTVADSGWGKCVWGKLYGQWIAGCA 294 (580)
T ss_dssp CCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTSCCCTTCEEEECCCTTSTHHHHHTTHHHHHTTCE
T ss_pred cCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhhCCCCCceEEEeCChHHHHHHHHHHHHHHhCCcE
Confidence 11111346789999999999999999999999999888877766777889999999999999999888778899999999
Q ss_pred EEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecc
Q 014065 231 VTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEA 310 (431)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~ 310 (431)
+++.+...+++..+++.|+++++|+++++|++++.+.+... ...+++++|.+++||+++++++.+++.+.+++++++.
T Consensus 295 ~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~--~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~g~~i~~~ 372 (580)
T 3etc_A 295 VFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKEDL--SHYNFSTLKYAVVAGEPLNPEVFNRFLEFTGIKLMEG 372 (580)
T ss_dssp EEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTSCC-----CCTTCCEEEECSSCCCHHHHHHHHHHHSCCCEEE
T ss_pred EEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhccc--ccCCCccceEEEEccCCCCHHHHHHHHHHhCCeEecc
Confidence 99875458899999999999999999999999999987632 2445799999999999999999999999999999999
Q ss_pred cCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeC-----CccccccccCcchhhhcc
Q 014065 311 YAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRG-----PNVTKGYKNNPEANKSAF 384 (431)
Q Consensus 311 yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~-----~~~~~gy~~~~~~~~~~~ 384 (431)
||+||++..++..+. ....++++|+|+ +++++|+|++|++++.|+.|||++++ ++++.||+++++.+++.|
T Consensus 373 YG~TE~~~~~~~~~~---~~~~~~~~G~p~~~~~v~ivd~~g~~~~~g~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f 449 (580)
T 3etc_A 373 FGQTETVVTIATFPW---MEPKPGSIGKPTPGYKIELMDRDGRLCEVGEEGEIVINTMEGKPVGLFVHYGKDPERTEETW 449 (580)
T ss_dssp ECCTTSSCCEECCTT---SCCCTTCCBEECTTCEEEEECTTSCBCCTTCCEEEEEECTTCCCTTCCCEETTCHHHHHHHE
T ss_pred cccccccceeecCCC---CCCCCCccccCCCCCEEEEECCCCCCCCCCCceEEEEecCCCCCCeeeccccCCHhHHHhhc
Confidence 999999877666543 345678999999 89999999999999999999999997 789999999999999999
Q ss_pred cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 385 LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 385 ~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.+|||+|||+|++|+||+++|+||.||+||++|++|+|.|||.+.
T Consensus 450 ~~gwy~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~eIE~~l 494 (580)
T 3etc_A 450 HDGYYHTGDMAWMDEDGYLWFVGRADDIIKTSGYKVGPFEVESAL 494 (580)
T ss_dssp ETTEEEEEEEEEECTTSCEEEEEESSSCEEETTEEECHHHHHHHH
T ss_pred CCCEEecCcEEEECCCCcEEEEecCCCEEEECCEEECHHHHHHHH
Confidence 999999999999999999999999999999999999999999864
No 3
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=7.1e-72 Score=545.20 Aligned_cols=421 Identities=22% Similarity=0.304 Sum_probs=334.6
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
+.|+.++|+++++++|+++|+++.+ +++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|+++
T Consensus 29 ~~tl~~~l~~~a~~~p~~~Al~~~~-~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~Gav~ 107 (544)
T 3o83_A 29 DQPLTRILTVGVQSHPHSLAIICGE-RQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGVVV 107 (544)
T ss_dssp CCCTTHHHHHHHHHCTTSEEEEETT-EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEE
T ss_pred CCCHHHHHHHHHHhCCCceEEEcCC-CceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEE
Confidence 5789999999999999999999755 799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCch-----hHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGN-----AAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLT 157 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (431)
+|+++.++.+++.++++.++++++|++.... ...........................+................
T Consensus 108 vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (544)
T 3o83_A 108 LNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQATDFGLLDWIETPAETFVDFSS 187 (544)
T ss_dssp EECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCCTTSEEHHHHHHSCCSSCCCCCC
T ss_pred ecCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCCccccchhhhhhccccccccccc
Confidence 9999999999999999999999999998653 22333322222111111111110000000000001111112234
Q ss_pred CCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHH-HHHHHHhcCCEEEeCCC
Q 014065 158 NDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLA-GLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 158 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~l~~G~~~~~~~~ 236 (431)
..++++++++|||||||.||+|.++|.++...+......+++.+++++++.+|++|.+++.. .++.++..|+++++.+
T Consensus 188 ~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~- 266 (544)
T 3o83_A 188 TPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMAP- 266 (544)
T ss_dssp CCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECS-
T ss_pred CCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEECC-
Confidence 56789999999999999999999999999999999999999999999999999999998875 5888999999999987
Q ss_pred CCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccc
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEA 316 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~ 316 (431)
.+++..+++.++++++|++.++|+++..+++..... ..+++++|.+++||+++++++.+++.+.+++++++.||+||+
T Consensus 267 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~ 344 (544)
T 3o83_A 267 -NPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQY-KDQIQSLKLLQVGGASFPESLARQVPEVLNCKLQQVFGMAEG 344 (544)
T ss_dssp -SCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTT-HHHHTTCCEEEEESSCCCHHHHTHHHHHHCSEEEEEEECTTS
T ss_pred -CCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhc-cccCCcceEEEEcCCCCCHHHHHHHHHHhCCcEEeeeccccc
Confidence 679999999999999999999999999998876543 234789999999999999999999999999999999999998
Q ss_pred cCcccCCCCCCCCCCCCCCccccc--cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cCCceecCc
Q 014065 317 THLMSSNPLPEDGPHKPGSVGRPV--GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFHTGD 393 (431)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD 393 (431)
+..+..... .......++|+|+ +.+++|+|+++++++.|+.|||+++||+++.||+++++.+++.| .+|||+|||
T Consensus 345 ~~~~~~~~~--~~~~~~~~~G~p~~~~~~~~i~d~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGD 422 (544)
T 3o83_A 345 LVNYTRLDD--SDEQIFTTQGRPISSDDEIKIVDEQYREVPEGEIGMLATRGPYTFCGYYQSPEHNSQVFDEDNYYYSGD 422 (544)
T ss_dssp CEEECCTTS--CHHHHHHCCCEESCTTCEEEEECTTSCBCCTTCCEEEEEECTTSCSCCTTCHHHHHHHBCTTCCEEEEE
T ss_pred cceeecCCC--chhhccCCCceecCCCcEEEEECCCCCCCCCCCeeEEEEecCCcchhhcCChhhhhhhCCCCCCeEcCC
Confidence 855443321 1223346899996 58999999999999999999999999999999999999999999 579999999
Q ss_pred eEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 394 IGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 394 ~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 423 lg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 458 (544)
T 3o83_A 423 LVQRTPDGNLRVVGRIKDQINRGGEKIASEEIEKLI 458 (544)
T ss_dssp EEEECTTSCEEEEEEEC-------------------
T ss_pred EEEEcCCCCEEEEeecCCEEEeCCEEECHHHHHHHH
Confidence 999999999999999999999999999999999874
No 4
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=1.9e-71 Score=538.83 Aligned_cols=417 Identities=29% Similarity=0.413 Sum_probs=354.9
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecC-CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSG-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
+..|+.++|+++|+++|+++|+++.+ ++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 14 ~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 93 (517)
T 3r44_A 14 KMKNIGWMLRQRATVSPRLQAYVEPSTDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGA 93 (517)
T ss_dssp GGGCHHHHHHHHHHHSTTSEEEEEGGGTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHhCCCCeEEEeCCcCceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHHHHHHHHhCc
Confidence 36789999999999999999999754 23899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCC
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDP 160 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (431)
+++|++|.++.+++.++++.++++++|++......................+.... .+..... ......+.....+
T Consensus 94 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~ 169 (517)
T 3r44_A 94 VAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIGAD---SLAERLR-SAAADEPAVECGG 169 (517)
T ss_dssp EEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSSSCCTTCCEEEEHH---HHHHHHH-HCCCCCCCCCCCT
T ss_pred EEEecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhccCCccEEEEccCcc---cHHHHhh-ccCcCCCCCCCCC
Confidence 99999999999999999999999999999887776666554433222111111110 1110000 0111122344568
Q ss_pred CCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCC
Q 014065 161 SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFS 240 (431)
Q Consensus 161 ~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~ 240 (431)
+++++++|||||||.||+|.++|.++...+......+++.+++++++.+|++|.+++...++..+ .|+++++.+ .++
T Consensus 170 ~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~~--~~~ 246 (517)
T 3r44_A 170 DDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISMP--QFD 246 (517)
T ss_dssp TSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEECS--SCC
T ss_pred CCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEeC--CCC
Confidence 99999999999999999999999999999999899999999999999999999999987455444 999999987 789
Q ss_pred hhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcc
Q 014065 241 ASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320 (431)
Q Consensus 241 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~ 320 (431)
+..+++.++++++|++.++|+++..+.+..... ..+++++|.+++||+++++++.+.+.+. ++++++.||+||+++.+
T Consensus 247 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~i~~gGe~l~~~~~~~~~~~-~~~~~~~YG~TE~~~~~ 324 (517)
T 3r44_A 247 ATKVWSLIVEERVCIGGAVPAILNFMRQVPEFA-ELDAPDFRYFITGGAPMPEALIKIYAAK-NIEVVQGYALTESCGGG 324 (517)
T ss_dssp HHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHH-HCCCTTCCEEEECSSCCCHHHHHHHHHT-TCEEEEEEECGGGTTCE
T ss_pred HHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccc-cCCCCcccEEEECCCCCCHHHHHHHHhc-CCcEEEeecccccccce
Confidence 999999999999999999999999998765432 2347899999999999999999999876 99999999999998776
Q ss_pred cCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcC
Q 014065 321 SSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDS 399 (431)
Q Consensus 321 ~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~ 399 (431)
+.... .+.....+++|+|. +.+++++|++|.+++.| .|||+++||+++.||+++++.+++.|.+|||+|||+|++|+
T Consensus 325 ~~~~~-~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g-~GEl~v~g~~v~~GY~~~p~~t~~~f~~g~~~TGDl~~~~~ 402 (517)
T 3r44_A 325 TLLLS-EDALRKAGSAGRATMFTDVAVRGDDGVIREHG-EGEVVIKSDILLKEYWNRPEATRDAFDNGWFRTGDIGEIDD 402 (517)
T ss_dssp EEECG-GGTTTTTTCCBEECTTEEEEEECTTSCEESSE-EEEEEEEETTSCSEETTCHHHHHHTEETTEEEEEEEEEECT
T ss_pred eecCC-ccccccCCCCCcCCCCeEEEEECCCCCCCCCC-CeEEEEeCcchhhhhCCChhhhHhhhcCCCEecceeEEEcC
Confidence 65432 22355678999999 79999999999999998 89999999999999999999999999999999999999999
Q ss_pred CCeEEEecccccceecCCeeccccceeccc
Q 014065 400 DGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 400 ~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||++++.||.||+||++|++|+|.|||.+.
T Consensus 403 dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 432 (517)
T 3r44_A 403 EGYLYIKDRLKDMIISGGENVYPAEIESVI 432 (517)
T ss_dssp TSCEEEEECGGGCEEETTEEECHHHHHHHH
T ss_pred CeeEEEecCCcCEEEECCEEECHHHHHHHH
Confidence 999999999999999999999999999864
No 5
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=2.6e-71 Score=540.59 Aligned_cols=418 Identities=22% Similarity=0.317 Sum_probs=351.1
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
.+.|+.++|+++++++|+++|+++.+ +++||+||+++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 23 ~~~tl~~~l~~~a~~~p~~~A~~~~~-~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~ 101 (539)
T 1mdb_A 23 AGETFGDLLRDRAAKYGDRIAITCGN-THWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGAL 101 (539)
T ss_dssp CSCCHHHHHHHHHHHHTTSEEEEETT-EEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCE
T ss_pred cCCCHHHHHHHHHHHCCCCEEEEeCC-CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCeE
Confidence 45799999999999999999999755 79999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchh-----HHHHHHHhcCcccccccccccchhhhhhhccccccccccccC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA-----AAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKL 156 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (431)
++|++|.++.+++.++++.++++++|+++.... ...............+...+.. .+..... .........
T Consensus 102 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~ 177 (539)
T 1mdb_A 102 PVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAE---EFLPLED-LHTEPVKLP 177 (539)
T ss_dssp EEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCT---TSEEGGG-CCCCCCCCC
T ss_pred EecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCcc---chhhhhh-ccccccccC
Confidence 999999999999999999999999999876421 2222222211111111111100 0000000 000111223
Q ss_pred CCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHH-HHHHHHhcCCEEEeCC
Q 014065 157 TNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLA-GLLSSFAAGAAVTLPA 235 (431)
Q Consensus 157 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~l~~G~~~~~~~ 235 (431)
...++++++++|||||||.||+|.++|.++...+......+++.+++++++.+|++|.+++.. .++.++..|+++++.+
T Consensus 178 ~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~ 257 (539)
T 1mdb_A 178 EVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSP 257 (539)
T ss_dssp CCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECS
T ss_pred CCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEECC
Confidence 456789999999999999999999999999999888888889999999999999999999875 6889999999999987
Q ss_pred CCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCccc
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTE 315 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE 315 (431)
.+++..+++.++++++|++.++|+++..+++..... ..+++++|.+++||+++++++.+++.+.+++++++.||+||
T Consensus 258 --~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE 334 (539)
T 1mdb_A 258 --SPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSR-RDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAE 334 (539)
T ss_dssp --SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHC-CCCCTTCCEEEEESSCCCHHHHTTHHHHTCSEEEEEEECTT
T ss_pred --CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCcccc-CCCccceeEEEEcCCCCCHHHHHHHHHHhCCcEEEEEcCCC
Confidence 689999999999999999999999999998875432 34579999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCCCCCCccccc-c-ceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cCCceecC
Q 014065 316 ATHLMSSNPLPEDGPHKPGSVGRPV-G-QEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFHTG 392 (431)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~G~~~-~-~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TG 392 (431)
++..+.... .......+++|+|+ + .+++|+|++|++++.|+.|||+++||+++.||+++++.+++.| .+|||+||
T Consensus 335 ~~~~~~~~~--~~~~~~~~~~G~p~~~~~~~~i~d~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TG 412 (539)
T 1mdb_A 335 GLVNYTRLD--DPEEIIVNTQGKPMSPYDESRVWDDHDRDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTG 412 (539)
T ss_dssp SCEEECCTT--SCHHHHHHCCCEESSTTCEEEEECTTSCBCCTTCCEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEE
T ss_pred CcccccCCC--CcHHhcCCCCCcccCCCceEEEECCCCCCCcCCCcceEEeeCcccchhhcCChhhhhhhccCCCCeecC
Confidence 654333211 11122346899998 5 4899999999999999999999999999999999999999999 48999999
Q ss_pred ceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 393 DIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 393 D~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 413 Dlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 449 (539)
T 1mdb_A 413 DIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHL 449 (539)
T ss_dssp EEEEECTTSCEEEEEEGGGCEECSSCEECHHHHHHHH
T ss_pred ceEEECCCCcEEEeccccceEEECCEEECHHHHHHHH
Confidence 9999999999999999999999999999999999864
No 6
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=6.8e-71 Score=533.17 Aligned_cols=410 Identities=30% Similarity=0.467 Sum_probs=350.0
Q ss_pred HHHHHHHHhcCCcceEEe--cCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEec
Q 014065 8 GLLNQVIDQFSSKRALSV--SGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPL 85 (431)
Q Consensus 8 ~~l~~~a~~~p~~~a~~~--~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 85 (431)
++|++.++++|++.++.. .+++++||+||+++++++|++|+++|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 4 ~l~~~~a~~~p~~~a~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl 83 (503)
T 4fuq_A 4 NLFARLFDKLDDPHKLAIETAAGDKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPL 83 (503)
T ss_dssp CHHHHHHSCCSCTTSEEEEETTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHHhCCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEec
Confidence 467888999999999985 455799999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCeEE
Q 014065 86 NAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDVAL 165 (431)
Q Consensus 86 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (431)
+|.++.+++.++++.++++++|++.+..+................. .+.......... ............++++++
T Consensus 84 ~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~d~a~ 159 (503)
T 4fuq_A 84 NTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKVGATVETLG-PDGRGSLTDAAA---GASEAFATIDRGADDLAA 159 (503)
T ss_dssp CTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHHTCEEEECC-TTSCSHHHHHHH---TSCSCCCCCCCCTTSEEE
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhcCceEEEec-CCcccccchhhh---cCCCCcCcCCCCCCCeEE
Confidence 9999999999999999999999998766555554443332111110 010001110000 111112233456799999
Q ss_pred EEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHH
Q 014065 166 FLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFW 245 (431)
Q Consensus 166 i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~ 245 (431)
++|||||||.||+|.++|.++.+.+......+++.+++++++.+|++|.+++...++.++..|+++++.+ .+++..++
T Consensus 160 i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~--~~~~~~~~ 237 (503)
T 4fuq_A 160 ILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLP--KFDPDKIL 237 (503)
T ss_dssp EEECC--CCSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEEECS--SCCHHHHH
T ss_pred EEECCCcccCCeEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEcC--CCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999998777888999999999987 78999999
Q ss_pred HHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcccCCCC
Q 014065 246 QDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMSSNPL 325 (431)
Q Consensus 246 ~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~~~~~ 325 (431)
+.++ ++|+++++|+++..+++..... ...++++|.+++||+++++++.+.+.+.+++++++.||+||++.......
T Consensus 238 ~~i~--~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~- 313 (503)
T 4fuq_A 238 DLMA--RATVLMGVPTFYTRLLQSPRLT-KETTGHMRLFISGSAPLLADTHREWSAKTGHAVLERYGMTETNMNTSNPY- 313 (503)
T ss_dssp HHHT--TCCEEEECHHHHHHHHTCTTCS-TTTTTTCCEEEECSSCCCHHHHHHHHHHHSCCEEECCEETTTEECBCCCS-
T ss_pred HHHh--hcCEEEEHHHHHHHHHhCCCcc-ccchhhcEEEEECCCCCCHHHHHHHHHHhCCCccceEcccccCcccccCC-
Confidence 9998 8999999999999998876543 34478999999999999999999999999999999999999987754332
Q ss_pred CCCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhccc-CCceecCceEEEcCCCe
Q 014065 326 PEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL-FGWFHTGDIGYFDSDGY 402 (431)
Q Consensus 326 ~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~ 402 (431)
+....++++|+|+ +++++|+| ++|++++.|+.|||+++||+++.||+++++.+++.|. +|||+|||+|++|+||+
T Consensus 314 --~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~ 391 (503)
T 4fuq_A 314 --DGDRVPGAVGPALPGVSARVTDPETGKELPRGDIGMIEVKGPNVFKGYWRMPEKTKSEFRDDGFFITGDLGKIDERGY 391 (503)
T ss_dssp --SSCCCTTEEEEBCTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCCCBTTCHHHHHHTBCTTSCEEEEEEEEECTTCE
T ss_pred --CCCCcCCccccCCCCeEEEEEECCCCCCCcCCCceEEEEECCchhhhhcCChhhhHhhhCCCCCeEcceeEEEcCCCc
Confidence 2455678999999 89999999 7799999999999999999999999999999999996 79999999999999999
Q ss_pred EEEecccccceecCCeeccccceeccc
Q 014065 403 LHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 403 l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+++.||.||+||++|++|+|.|||.+.
T Consensus 392 l~~~GR~dd~ik~~G~~v~p~eIE~~l 418 (503)
T 4fuq_A 392 VHILGRGKDLVITGGFNVYPKEIESEI 418 (503)
T ss_dssp EEECCSSTTCEEETTEEECHHHHHHHH
T ss_pred EEEEecCCCEEEECCEEECHHHHHHHH
Confidence 999999999999999999999999863
No 7
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=7.4e-71 Score=539.01 Aligned_cols=421 Identities=24% Similarity=0.381 Sum_probs=330.5
Q ss_pred CcccHHHHHHHHHHhcCCcceEE---ec-CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHH
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALS---VS-GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIR 77 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~---~~-~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~ 77 (431)
.+.|+.++|.++++++|+++|++ +. +++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||++
T Consensus 18 ~~~tl~~~l~~~a~~~p~~~a~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 97 (550)
T 3rix_A 18 EDGTAGEQLHKAMKRYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALF 97 (550)
T ss_dssp CCSCHHHHHHHHHHHHHTSTTCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCCCCceEEEeeecCCCcEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccHHHHHHHHHH
Confidence 46799999999999999999976 32 357999999999999999999999999999999999999999999999999
Q ss_pred hCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccch---hh---hh-hhccc--cc
Q 014065 78 ARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADS---EL---TL-SLAHS--ES 148 (431)
Q Consensus 78 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~-~~~~~--~~ 148 (431)
+|++++|++|.++.+++.++++.++++++|++.+..+.+.............+....... .. .+ ..... ..
T Consensus 98 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (550)
T 3rix_A 98 IGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFN 177 (550)
T ss_dssp HTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCBTTBCBHHHHHHHHCCTTCC
T ss_pred cCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHhhCCCcceEEEEcCCccccCcccHHHHhhcccccccc
Confidence 999999999999999999999999999999999887777766655443222222211100 00 00 00000 00
Q ss_pred cccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHH
Q 014065 149 DTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSF 225 (431)
Q Consensus 149 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 225 (431)
.....+.....++++++++|||||||.||+|.++|.++...+...... .++.+++++++.+|++|.+++.. .+.++
T Consensus 178 ~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~l 256 (550)
T 3rix_A 178 EYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFT-TLGYL 256 (550)
T ss_dssp TTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHH-HHHHH
T ss_pred ccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHHHH-HHHHH
Confidence 001111222345789999999999999999999999998887766554 46788999999999999999876 78889
Q ss_pred hcCCEEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCC
Q 014065 226 AAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGA 305 (431)
Q Consensus 226 ~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~ 305 (431)
..|+++++.+ .+++..+++.++++++|+++++|+++..+++..... ..+++++|.+++||+++++++.+++.+.++.
T Consensus 257 ~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~ 333 (550)
T 3rix_A 257 ICGFRVVLMY--RFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLID-KYDLSNLHEIASGGAPLSKEVGEAVAKRFHL 333 (550)
T ss_dssp HHTCEEEECS--SCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGG-GSCCTTCCEEEECSSCCCHHHHHHHHHHTTC
T ss_pred HcCCEEEEeC--CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcccc-ccCcccccEEEEecCCCCHHHHHHHHHHcCC
Confidence 9999999987 789999999999999999999999999998876543 3457899999999999999999999999986
Q ss_pred c-eecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhh
Q 014065 306 P-VLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKS 382 (431)
Q Consensus 306 ~-i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~ 382 (431)
. +++.||+||+++.++..+. .....+++|+|+ +++++|+| ++|++++.|+.|||+++||+++.||+++++.+++
T Consensus 334 ~~v~~~YG~TE~~~~~~~~~~---~~~~~~~vG~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~ 410 (550)
T 3rix_A 334 PGIRQGYGLTETTSAILITPE---GDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSGYVNNPEATNA 410 (550)
T ss_dssp SCCEEEEECGGGSSEEEECCT---TCCCTTEEEEECTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETTCHHHHHH
T ss_pred CccccccCcCccccceecCCC---CCCCCCCcccccCCcEEEEEeCCCCcCCCCCCCeEEEEeCCCcchhhcCChhhhhh
Confidence 5 8999999999988776653 345678999999 89999999 5699999999999999999999999999999999
Q ss_pred cc-cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 383 AF-LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 383 ~~-~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.| .+|||+|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 411 ~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 458 (550)
T 3rix_A 411 LIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESIL 458 (550)
T ss_dssp HBCTTSCEEEEEEEEECTTCCEEEC-----------------------
T ss_pred hcCCCCCeecCcEEEEeCCceEEEEecchheeEECCEEECHHHHHHHH
Confidence 88 679999999999999999999999999999999999999999874
No 8
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=5e-71 Score=540.14 Aligned_cols=419 Identities=26% Similarity=0.406 Sum_probs=347.6
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCC-------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHH
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGK-------FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLA 74 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA 74 (431)
...|+.++|+++|+++|+++|+++.++ +++||+||.++++++|++|++.|+++||+|+++++|++++++++||
T Consensus 17 ~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 96 (549)
T 3g7s_A 17 PKISLADRIDAAAEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDYVMTIYA 96 (549)
T ss_dssp CCCCTTHHHHHHHHHHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 467899999999999999999997652 6899999999999999999999999999999999999999999999
Q ss_pred HHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccc
Q 014065 75 VIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAIS 154 (431)
Q Consensus 75 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (431)
|+++|++++|++|.++.+++.++++.++++++|++....+................ ...... .+.......... ..
T Consensus 97 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~-~~ 172 (549)
T 3g7s_A 97 LWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKTGVERVFV-VGGEVN--SLSEVMDSGSED-FE 172 (549)
T ss_dssp HHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTSCCCEEEE-ETCSSS--CHHHHHHHSCSC-CC
T ss_pred HHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhCCCcEEEE-eCCCCc--CHHHHHhcCccc-cc
Confidence 99999999999999999999999999999999999987777666655444322211 111100 010000000011 11
Q ss_pred cCCCC-CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEe
Q 014065 155 KLTND-PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTL 233 (431)
Q Consensus 155 ~~~~~-~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 233 (431)
..... ++++++++|||||||.||+|.++|.++...+......+++.++++++..+|++|.+++.. ++.++..|+++++
T Consensus 173 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~-~~~~l~~G~~~~~ 251 (549)
T 3g7s_A 173 NVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMPMFHSAEFGL-VNLMVTVGNEYVV 251 (549)
T ss_dssp CCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHCCCTTCEEECCSCTTSHHHHHH-HTTHHHHCCEEEE
T ss_pred cccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcCCCCCCEEEEeCcHHHHHHHHH-HHHHHhcCceEEE
Confidence 12223 389999999999999999999999999999999889999999999999999999999887 8889999999999
Q ss_pred CCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCC-CCCCCCccEEEeccCCCcHHHHHHHHHH----hC---C
Q 014065 234 PAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP-EPVYPKLRFIRSCSASLAPVILSRLEEA----FG---A 305 (431)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~-~~~~~~l~~i~~~g~~~~~~~~~~~~~~----~~---~ 305 (431)
.+ .+++..+++.|+++++|+++++|+++..+++...... ..+++++|.+++||+++++++.+++.+. ++ +
T Consensus 252 ~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~ 329 (549)
T 3g7s_A 252 MG--MFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTYDWSYLKVFATGAWPVAPALVEKLLKLAAEKCNNPRL 329 (549)
T ss_dssp ES--SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCCCCCTTCCEEEEESSCCCHHHHHHHHHHHHHHSSCTTC
T ss_pred cC--CCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcccCCccceeEEEeCCccCCHHHHHHHHHHHHhhcCCccc
Confidence 87 7899999999999999999999999999988754432 2457899999999999999999999988 56 8
Q ss_pred ceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhc
Q 014065 306 PVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSA 383 (431)
Q Consensus 306 ~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~ 383 (431)
++++.||+||++.+++.... .......++|+|+ +++++|+| ++|++++.|+.|||+|+||+++.||+++++.+++.
T Consensus 330 ~~~~~YG~TE~~~~~~~~~~--~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~ 407 (549)
T 3g7s_A 330 RHNQIWGMTEACPMVTTNPP--LRLDKSTTQGVPMSDIELKVISLEDGRELGVGESGEIVIRGPNIFKGYWKREKENQEC 407 (549)
T ss_dssp EEEEEEECGGGSSEEEECCG--GGGGGTTSCCEECTTCEEEEECSSSCCEECTTCCEEEEEESTTSCSEETTCTTGGGTS
T ss_pred cccceEeccccchhhhcCCc--cccCcCCCccccCCCCEEEEEeCCCCcCCCCCCceEEEEECcchhhhhCCChhhhhhh
Confidence 89999999999988776543 2235667899999 89999999 88999999999999999999999999999999998
Q ss_pred c---cCC--ceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 384 F---LFG--WFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 384 ~---~~g--~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
| .+| ||+|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 408 f~~~~~g~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 458 (549)
T 3g7s_A 408 WWYDEKGRKFFRTGDVGFIDEEGFLHFQDRVKEVIKYKGYTIAPFELEALL 458 (549)
T ss_dssp EEECTTCCEEEEEEEEEEECTTSCEEEEEEC------------CHHHHHHH
T ss_pred hhccCCCCceEccCcEEEEcCCceEEEeccccceEEECCEEECHHHHHHHH
Confidence 8 567 999999999999999999999999999999999999999864
No 9
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=9.9e-71 Score=536.74 Aligned_cols=419 Identities=26% Similarity=0.346 Sum_probs=348.6
Q ss_pred cccHHHHHHHHHHhcCCcceEEe---cCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhC
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSV---SGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRAR 79 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~---~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 79 (431)
..|+.++|+++++++|+++|+++ .+++++||+||+++++++|++|+++|+++||+|+++++|++++++++|||+++|
T Consensus 17 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G 96 (541)
T 1v25_A 17 ELNLWDFLERAAALFGRKEVVSRLHTGEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGMG 96 (541)
T ss_dssp CCCTHHHHHHHHHHSTTCEEEEECTTSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhCCCceEEEEecCCCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcC
Confidence 35899999999999999999985 244799999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc--hhhhhhhccccccccccccCC
Q 014065 80 ATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD--SELTLSLAHSESDTNAISKLT 157 (431)
Q Consensus 80 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 157 (431)
++++|++|.++.+++.++++.++++++|++.+..+...............+.+.... ....+....... .....
T Consensus 97 av~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 172 (541)
T 1v25_A 97 AVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEALGEE----ADPVR 172 (541)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTTCEEHHHHCCSC----CCCCC
T ss_pred cEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHhhCCCccEEEEecCCCCcccccHHHHhhcc----CCccc
Confidence 999999999999999999999999999999887666555443322111111111110 000111100000 01133
Q ss_pred CCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHH--HHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 158 NDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSN--IKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 158 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
..++++++++|||||||.||+|.++|.+++..... ....+++.++|++++.+|++|.+++.. ++.++..|+++++.+
T Consensus 173 ~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~-~~~~l~~G~~~v~~~ 251 (541)
T 1v25_A 173 VPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCL-PYAATLVGAKQVLPG 251 (541)
T ss_dssp CCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHHTH-HHHHHHHTCEEEECT
T ss_pred CCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccccCCCCCEEEEeccchhhhHHHH-HHHHHhcCceEEeeC
Confidence 45789999999999999999999999999877654 335567889999999999999999865 778899999999976
Q ss_pred CCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCccc
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTE 315 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE 315 (431)
. .+++..+++.++++++|+++++|+++..+++..... ..+++++|.+++||+++++++.+.+ +.+++++++.||+||
T Consensus 252 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~l~~lr~i~~gG~~l~~~~~~~~-~~~g~~~~~~YG~TE 328 (541)
T 1v25_A 252 P-RLDPASLVELFDGEGVTFTAGVPTVWLALADYLEST-GHRLKTLRRLVVGGSAAPRSLIARF-ERMGVEVRQGYGLTE 328 (541)
T ss_dssp T-CCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHH-TCCCSSCCEEEECSSCCCHHHHHHH-HHTTCEEEEEEECGG
T ss_pred C-CCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhcc-CCcchhccEEEECCCCCCHHHHHHH-HHhCCceeecccccc
Confidence 3 479999999999999999999999999998765432 2347899999999999999999999 678999999999999
Q ss_pred ccCcccCCCCCCCC--------CCCCCCccccc-cceEEEECCCCCcCCC--CceeeEEEeCCccccccccCcchhhhcc
Q 014065 316 ATHLMSSNPLPEDG--------PHKPGSVGRPV-GQEIAILDEIGVPQEG--GAKGEVCIRGPNVTKGYKNNPEANKSAF 384 (431)
Q Consensus 316 ~~~~~~~~~~~~~~--------~~~~~~~G~~~-~~~~~i~d~~~~~~~~--~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 384 (431)
++++++........ ....+++|+|+ +++++|+|++|++++. ++.|||+++||+++.||+++++.+++.|
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~~~~~~GEl~v~g~~v~~GY~~~p~~t~~~f 408 (541)
T 1v25_A 329 TSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVADEEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSAL 408 (541)
T ss_dssp GSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEEEECTTSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTB
T ss_pred cccceecccccccccccCccccccccCCCCCcCCCcEEEEECCCCCCCCCCCCcceEEEEeCcchhccccCChhhhhhhc
Confidence 99877665432100 02357899999 8999999999999984 3689999999999999999999999999
Q ss_pred c-CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 385 L-FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 385 ~-~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
. +|||+|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 409 ~~~g~~~TGDlg~~d~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l 454 (541)
T 1v25_A 409 TPDGFFRTGDIAVWDEEGYVEIKDRLKDLIKSGGEWISSVDLENAL 454 (541)
T ss_dssp CTTSCEEEEEEEEECTTCCEEEEEESSCEEEETTEEEEHHHHHCC-
T ss_pred cCCCCeEcCCEEEEcCCceEEEeecccceeeeCCEEECHHHHHHHH
Confidence 6 89999999999999999999999999999999999999999874
No 10
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=3.7e-70 Score=529.67 Aligned_cols=412 Identities=28% Similarity=0.419 Sum_probs=328.0
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
.++|+.++|+++|+++|+++|+++.+ +++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 4 ~~~tl~~~l~~~a~~~pd~~Al~~~~-~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~ 82 (509)
T 3ivr_A 4 HDFTLADVYRRNAALFPDRTAFMVDG-VRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIGAVALIGAI 82 (509)
T ss_dssp TCCCHHHHHHHHHHHSTTSEEEEETT-EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCE
T ss_pred CcCCHHHHHHHHHHHCCCceEEEECC-cEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCE
Confidence 57899999999999999999999755 79999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPS 161 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (431)
++|++|.++.+++.++++.++++++|++.+..................+...+.. ..+..................++
T Consensus 83 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 160 (509)
T 3ivr_A 83 LLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGDGS--GPFAPFKDLASDTPFSAPEFGAA 160 (509)
T ss_dssp EEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGGGCSSCCEEEESSCCC--SSCEEGGGTCCCSCCCCCCCCTT
T ss_pred EEecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhcccCCceEEEEcCCCC--cChhhHhhccCCCCCCcCCCCcc
Confidence 9999999999999999999999999999987766444433322211111111110 00000000011112223456789
Q ss_pred CeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCCh
Q 014065 162 DVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSA 241 (431)
Q Consensus 162 ~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~ 241 (431)
++++++|||||||.||+|.++|.++...+......+++.+++++++.+|++|.+++...+...+. |++.++.. .+++
T Consensus 161 d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~-~g~~~~~~--~~~~ 237 (509)
T 3ivr_A 161 DGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADVNLGMLPLFHVTGLGLMLTLQQA-GGASVIAA--KFDP 237 (509)
T ss_dssp SEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHHHHHHHH-TCEEEECS--SCCH
T ss_pred ccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEeCCCcchhHHHHHHHHHHh-CCcEEEec--ccCH
Confidence 99999999999999999999999999999998999999999999999999999999874444444 44444444 6799
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCcc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLM 320 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~ 320 (431)
..+++.++++++|++..+|+++..+++... ..+++++|.+..+|++ +..+.+.+.+ ++++++.||+||+++++
T Consensus 238 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~---~~~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~YG~TE~~~~~ 311 (509)
T 3ivr_A 238 AQAARDIEAHKVTVMAEFAPMLGNILDQAA---PAQLASLRAVTGLDTP---ETIERFEATCPNATFWATFGQSETSGLS 311 (509)
T ss_dssp HHHHHHHHHHTCCEEEEETTHHHHHHHHCC---GGGGTTCCEEEEECCH---HHHHHHHHHCTTCEEEEEEEEGGGTEEE
T ss_pred HHHHHHHHHHCCcEEEecHHHHHHHHhccc---ccchhhhheecccCCh---HHHHHHHHhcCCCeEEcccCcccccccc
Confidence 999999999999999999999999988762 3347899999999987 8888888888 89999999999999876
Q ss_pred cCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcC
Q 014065 321 SSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDS 399 (431)
Q Consensus 321 ~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~ 399 (431)
+..+.. ....++|+|+ +++++|+|++|++++.|+.|||+++|++++.||+++++.+++.|.+|||+|||+|++|+
T Consensus 312 ~~~~~~----~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~g~~~TGDl~~~~~ 387 (509)
T 3ivr_A 312 TFAPYR----DRPKSAGRPLFWRTVAVVDAEDRPLPPGEVGEIVLRGPTVFKGYWNNAAATQHAFRNGWHHTGDMGRFDA 387 (509)
T ss_dssp EEEEGG----GSTTSCCEECTTCEEEEECTTSCBCCTTCCEEEEEESTTSCCEETTCHHHHHHHTGGGSEEEEEEEEECT
T ss_pred ccCccc----cCCCcccccCCCcEEEEECCCCCCCCCCCceEEEEecCCccccccCCHHHhHHHhhcCCcccccEEEECC
Confidence 665431 2234599999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeccc--ccceecCCeeccccceeccc
Q 014065 400 DGYLHLVGRI--KELINRGGNLHESISLFLAK 429 (431)
Q Consensus 400 ~g~l~~~gR~--~d~i~~~G~~i~~~~iE~a~ 429 (431)
||++++.||. +|+||++|++|+|.|||.+.
T Consensus 388 dG~l~~~GR~d~~d~ik~~G~~v~p~eiE~~l 419 (509)
T 3ivr_A 388 DGYLFYAGRAPEKELIKTGGENVYPAEVEGAL 419 (509)
T ss_dssp TSCEEEEEEC----------------------
T ss_pred CceEEEeCCCCcceeEEECCEEECHHHHHHHH
Confidence 9999999999 99999999999999999874
No 11
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=1.1e-69 Score=525.32 Aligned_cols=409 Identities=22% Similarity=0.283 Sum_probs=342.9
Q ss_pred ccHHHHHHHHHHhcCCcceEEecC-CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSG-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
+|+.++|+++|+++|+++|+++.+ ++++||+||+++++++|++|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 2 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 81 (504)
T 1t5h_X 2 QTVNEMLRRAATRAPDHCALAVPARGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVP 81 (504)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEETTTTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEE
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCcEE
Confidence 579999999999999999999752 4799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEe--cCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLT--PAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDP 160 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (431)
+|++|.++.+++.++++.++++++++ +....+... ..... ...+.+.+. ...................+
T Consensus 82 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~---~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 152 (504)
T 1t5h_X 82 ALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIF---QSGSG-ARIIFLGDL-----VRDGEPYSYGPPIEDPQREP 152 (504)
T ss_dssp EEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHHH---HHCCC-CEEEEGGGT-----EETTEECCCSCCCCCCCCCT
T ss_pred EecCCccChHHHHHHHhhcCCcEEEEecchhhhhhhh---hcccc-ceeEEecch-----hhcCcccccCCccCCCCCCC
Confidence 99999999999999999999999999 665433321 11110 001101000 00000000001111134567
Q ss_pred CCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcC--CCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCC
Q 014065 161 SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKL--TESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGR 238 (431)
Q Consensus 161 ~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~ 238 (431)
+++++++|||||||.||+|.++|+++.+.+......+++ .+++++++.+|++|.+++...++.++..|+++++.+ .
T Consensus 153 ~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~--~ 230 (504)
T 1t5h_X 153 AQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVE--E 230 (504)
T ss_dssp TSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTTCCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCEEEECS--S
T ss_pred CCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhhCCCCCCCceEEeecchhhcchHHHHHHHHHHcCceEEeCC--C
Confidence 899999999999999999999999999888888777888 889999999999999998766899999999999987 6
Q ss_pred CChhhHHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCccccc
Q 014065 239 FSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEAT 317 (431)
Q Consensus 239 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~ 317 (431)
+++..+++.|+++++|+++++|++++.+++.... ....+++++|.+++||+++++++.+.+.+.+++.+++.||+||++
T Consensus 231 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~ 310 (504)
T 1t5h_X 231 FRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHLPGEKVNIYGTTEAM 310 (504)
T ss_dssp CCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTCCCCCTTCCEEEECCTTCCHHHHHHHHHHCCSEEEEEEEETTTE
T ss_pred CCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccccccCccccEEEEcCCcCCHHHHHHHHHhcCcceeeeecccccc
Confidence 8999999999999999999999999999887632 233457999999999999999999999999999999999999984
Q ss_pred CcccCCCCCCCCCCCCCCccccc-cceEEEECCCC---CcCCCCceeeEEEe-CCccccccccCcchhhhcccCCceecC
Q 014065 318 HLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIG---VPQEGGAKGEVCIR-GPNVTKGYKNNPEANKSAFLFGWFHTG 392 (431)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~---~~~~~~~~Gel~v~-~~~~~~gy~~~~~~~~~~~~~g~~~TG 392 (431)
.. .... ....+++|+|. +.+++++|+++ ++++.|+.|||+++ |+.++.||+++++.+++.|.+|||+||
T Consensus 311 ~~-~~~~-----~~~~~~~g~p~~~~~~~i~~~~~~~~~~~~~g~~GEl~v~gg~~~~~GY~~~~~~t~~~f~~g~~~TG 384 (504)
T 1t5h_X 311 NS-LYMR-----QPKTGTEMAPGFFSEVRIVRIGGGVDEIVANGEEGELIVAASDSAFVGYLNQPQATAEKLQDGWYRTS 384 (504)
T ss_dssp EE-EEEE-----SCSSSSEEBCCTTCCEEEECTTSCTTCBCCTTCCEEEEEECCTTSCCCBTTCHHHHHHHEETTEEEEE
T ss_pred cc-cccc-----CCCCCccccCCCCCceeEEeccCCCCCcCCCCCcceEEEeCCceeeceecCCchhhhhhhcCCccccC
Confidence 32 2211 24567899998 79999999887 89999999999999 899999999999999999999999999
Q ss_pred ceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 393 DIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 393 D~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 385 Dlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 421 (504)
T 1t5h_X 385 DVAVWTPEGTVRILGRVDDMIISGGENIHPSEIERVL 421 (504)
T ss_dssp EEEEECTTSCEEEEEEGGGCEEETTEEECHHHHHHHH
T ss_pred cEEEECCCceEEEeCcccCEEEECCEEECHHHHHHHH
Confidence 9999999999999999999999999999999999864
No 12
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=1.2e-69 Score=529.69 Aligned_cols=418 Identities=25% Similarity=0.354 Sum_probs=350.4
Q ss_pred ccHHH-HHHHHHHhcCCcceEEec-CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 4 VTLIG-LLNQVIDQFSSKRALSVS-GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 4 ~tl~~-~l~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
.|+.+ ++.++++++ +++|+++. +++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 25 ~~l~~~~l~~~~~~~-~~~A~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~la~~~~Gav 103 (548)
T 2d1s_A 25 AGTQLRKYMERYAKL-GAIAFTNAVTGVDYSYAEYLEKSCCLGKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVG 103 (548)
T ss_dssp HHHHHHHHHHHHHHH-TCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCE
T ss_pred CcHHHHHHHhhhccc-CCceEEEcCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhhCCE
Confidence 47889 899999999 99999974 4579999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccch---hhhhhhccccccccccccCCC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADS---ELTLSLAHSESDTNAISKLTN 158 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 158 (431)
++|++|.++.+++.++++.++++++|++....+.+.............+.+..... ...+............+....
T Consensus 104 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (548)
T 2d1s_A 104 VAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDYRGYQCLDTFIKRNTPPGFQASSF 183 (548)
T ss_dssp EEEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHHSTTCCEEEETTCSSCBTTBCBHHHHHHHTSCTTCCGGGC
T ss_pred EeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcCCCCCCEEEEeCCcccccccccHHHHHhcCccccCCcccc
Confidence 99999999999999999999999999999877666554433221111111111100 000000000000000001111
Q ss_pred ------CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCC
Q 014065 159 ------DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGA 229 (431)
Q Consensus 159 ------~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~ 229 (431)
.++++++++|||||||.||+|.++|+++...+...... +++.+++++++.+|++|.+++...++.++ .|+
T Consensus 184 ~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~ 262 (548)
T 2d1s_A 184 KTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGF 262 (548)
T ss_dssp CCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTC
T ss_pred cccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCc
Confidence 23899999999999999999999999999888776665 67889999999999999999987677777 999
Q ss_pred EEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCcee
Q 014065 230 AVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVL 308 (431)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~ 308 (431)
++++.+ .+++..+++.|+++++|+++++|++++.+.+..... ..+++++|.+++||+++++++.+++.+.+ +++++
T Consensus 263 ~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~ 339 (548)
T 2d1s_A 263 RVVMLT--KFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLN-KYDLSNLVEIASGGAPLSKEVGEAVARRFNLPGVR 339 (548)
T ss_dssp EEEECC--CCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGG-GSCCTTCCEEEECSSCCCHHHHHHHHHHTTCSCCE
T ss_pred EEEEcC--CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccc-cccccceeEEEEcCccCCHHHHHHHHHHcCCCcee
Confidence 999987 689999999999999999999999999998765432 23578999999999999999999999999 68899
Q ss_pred cccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-c
Q 014065 309 EAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-L 385 (431)
Q Consensus 309 ~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~ 385 (431)
+.||+||++..++..+. .....+++|+|+ +++++|+| ++|++++.|+.|||+++|++++.||+++++.+++.| .
T Consensus 340 ~~YG~TE~~~~~~~~~~---~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~ 416 (548)
T 2d1s_A 340 QGYGLTETTSAIIITPE---GDDKPGASGKVVPLFKAKVIDLDTKKSLGPNRRGEVCVKGPMLMKGYVNNPEATKELIDE 416 (548)
T ss_dssp EEEECGGGSSEEEECCT---TCCCTTCCBEECTTCEEEEECTTTCCBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCT
T ss_pred eccccccccceeeecCc---ccCCCCCCCccCCCceEEEEeCCcCccCCCCCCeEEEECCHHHhhhhcCChHHhhhcccC
Confidence 99999999987766432 235678999999 79999999 789999999999999999999999999999999988 5
Q ss_pred CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 386 FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 386 ~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|||+|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 417 ~g~~~TGDl~~~~~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l 460 (548)
T 2d1s_A 417 EGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAELESVL 460 (548)
T ss_dssp TSCEEEEEEEEECTTCCEEEEEEGGGCBCBTTCCBCHHHHHHHH
T ss_pred CcEEEccCEEEEcCCCeEEEeccccceEEECCEEECHHHHHHHH
Confidence 79999999999999999999999999999999999999999863
No 13
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=5.6e-70 Score=537.12 Aligned_cols=401 Identities=16% Similarity=0.212 Sum_probs=344.0
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..|+.++|+++|+++|+++|+++.+ +++||+||+++++++|++|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 26 ~~tl~~~~~~~a~~~Pd~~Av~~~~-~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~lailkaGa~~ 104 (620)
T 4dg8_A 26 HPTVVARFSEMAALHPHREAIRDRF-GSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHY 104 (620)
T ss_dssp SCCHHHHHHHHHHHCTTSEEEEETT-EEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcCC-CcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 4689999999999999999999755 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|++|.++.+++.++++.+++++++++........ ...... .... .............+++
T Consensus 105 vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~~~------~~~~~~-----------~~~~--~~~~~~~~~~~~~~~d 165 (620)
T 4dg8_A 105 LYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPAN------GLPCVP-----------VRHL--PAAPASVARPCFAADQ 165 (620)
T ss_dssp EECCTTSCHHHHHHHHHHHTEEEEEECCSSCCCCT------TSCEEE-----------GGGC--CCCCCCSSCCCCCTTS
T ss_pred EeeCccChHHHHHHHHHhCCCcEEEecCccccccc------CCceee-----------eccC--CcCCccccCCCCCCCC
Confidence 99999999999999999999999997654321100 000000 0000 0111111223346799
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAS 242 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 242 (431)
+++++|||||||.||+|.++|.++.+.+.. ...+++.++++++...|++|..+++. ++.++..|+++++.+...+++.
T Consensus 166 ~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~~v~~~~~~~~~~ 243 (620)
T 4dg8_A 166 IAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFLAFAPQMRFLVNSPLSFDAATLE-IWGALLNGGCCVLNDLGPLDPG 243 (620)
T ss_dssp EEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGGTTCTTCEEEECSCTTSTHHHHH-HHHHHTTTCEEEECCSSSCCHH
T ss_pred eEEEEECCCccccCeEEEEchHHHHHHHHH-HHhhCCCCCCEEEEECccCHHHHHHH-HHHHHhcCCEEEeCccccCCHH
Confidence 999999999999999999999999876655 55678899999999999999999877 8999999999999765578999
Q ss_pred hHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCccc
Q 014065 243 TFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLMS 321 (431)
Q Consensus 243 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~ 321 (431)
.+++.++++++|++.++|++++.+++... ..++++|.+++||++++++..+.+.+.+ +++++|.||+||++.+++
T Consensus 244 ~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~----~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~ 319 (620)
T 4dg8_A 244 VLRQLIGERGADSAWLTASLFNTLVDLDP----DCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTC 319 (620)
T ss_dssp HHHHHHHTTCCCEEEEEHHHHHHHHHHCG----GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSE
T ss_pred HHHHHHHHhCCcEEEccHHHHHHHHhcCh----hhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeEchhhhhhheE
Confidence 99999999999999999999999987532 2478999999999999999998888776 899999999999998766
Q ss_pred CCCCCC-CCCCCCCCccccc-cceEEEECCCCCc-CCCCceeeEEEeCCccccccccCcchhhhcccC--------Ccee
Q 014065 322 SNPLPE-DGPHKPGSVGRPV-GQEIAILDEIGVP-QEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF--------GWFH 390 (431)
Q Consensus 322 ~~~~~~-~~~~~~~~~G~~~-~~~~~i~d~~~~~-~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~--------g~~~ 390 (431)
...... .......++|+|+ +++++|+|+++++ ++.|+.|||+++|+++++||+++++.+++.|.+ +||+
T Consensus 320 ~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~~g~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~p~~~~~~~~yr 399 (620)
T 4dg8_A 320 CHVVTDDDLEEDDIPIGKAIAGTAVLLLDEHGQEIAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYR 399 (620)
T ss_dssp EEECCTGGGGSSSCCCBEECTTEEEEEECTTSCBCCSSSCCEEEEEEETTCCSEETTCHHHHHHHEEEEEETTEEEEEEE
T ss_pred EEeccccccCCCCCCceecccCcEEEEECccCCCCCCCCCceEEEEeccccccccCCChhhhhhhhccCCCCCCCceEEe
Confidence 543222 2245567899999 8999999999887 789999999999999999999999999999864 7999
Q ss_pred cCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 391 TGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 391 TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|||+|++++||+++|+||.||+||++|++|+|.|||.+.
T Consensus 400 TGDl~~~~~dG~l~~~GR~dd~Ik~~G~ri~~~eIE~~l 438 (620)
T 4dg8_A 400 TGDRARYDEQGRLRFIGRGDGQVKLNGYRLDLPALEQRF 438 (620)
T ss_dssp EEEEEEECTTSCEEEEECSSSEEEETTEEEEHHHHHHHH
T ss_pred CCCEEEECCCCeEEEEccCCCEEEECCEEcCHHHHHHHH
Confidence 999999999999999999999999999999999999864
No 14
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=1.6e-69 Score=530.54 Aligned_cols=417 Identities=21% Similarity=0.282 Sum_probs=350.0
Q ss_pred cHHHHHHHHHHh-----cCCcceEEecC----CCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCcHHHHHHHHH
Q 014065 5 TLIGLLNQVIDQ-----FSSKRALSVSG----KFDLTYSRIHELVERAASRLVAA-GINAGDVVALTFPNTVEFVIMFLA 74 (431)
Q Consensus 5 tl~~~l~~~a~~-----~p~~~a~~~~~----~~~~Ty~el~~~~~~~a~~L~~~-gl~~gd~V~i~~~n~~~~~~~~lA 74 (431)
++.++|++++++ +|+++|+++.+ ++++||+||.++++++|++|++. |+++||+|+++++|++++++++||
T Consensus 39 ~~~~~l~~~a~~~~a~~~p~~~al~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~~~~~lA 118 (570)
T 3c5e_A 39 FASDVLDHWADMEKAGKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILG 118 (570)
T ss_dssp HHHHTHHHHHHHHHTTSSCCCEEEEEECSSSCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccCCCCceEEEEEcCCCceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 467899999999 99999999732 36899999999999999999999 999999999999999999999999
Q ss_pred HHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccc--hhhhhhhccccccccc
Q 014065 75 VIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDAD--SELTLSLAHSESDTNA 152 (431)
Q Consensus 75 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 152 (431)
|+++|++++|+++.++.+++.++++.++++++|++.+..+.+.............+.+.+.. ....+....... ...
T Consensus 119 ~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 197 (570)
T 3c5e_A 119 CIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGWLNFKKLLNEA-STT 197 (570)
T ss_dssp HHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGGGCTTCCEEEEESSSCCTTSEEHHHHHHHS-CSC
T ss_pred HHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhhcCCceeEEEEecccCccccccHHHHhhcc-ccc
Confidence 99999999999999999999999999999999999887766655443322111111111100 000011000000 011
Q ss_pred cccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHH--HHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCE
Q 014065 153 ISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAA--SVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAA 230 (431)
Q Consensus 153 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~ 230 (431)
.......++++++++|||||||.||+|.++|. ++. ..... ..+++.++|++++.+|++|.+++...++.++..|++
T Consensus 198 ~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~ 275 (570)
T 3c5e_A 198 HHCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMDA-GWTGLQASDIMWTISDTGWILNILCSLMEPWALGAC 275 (570)
T ss_dssp CCCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHHT-TTTSCCTTCEEEECCCTTSHHHHHHTTHHHHHHTCE
T ss_pred ccccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhhh-hhcCCCCCceEEEcCchHHHHHHHHHHHHHHHhCce
Confidence 11234567899999999999999999999999 554 33333 667889999999999999999998778999999999
Q ss_pred EEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecc
Q 014065 231 VTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEA 310 (431)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~ 310 (431)
+++.+...+++..+++.|+++++|+++++|++++.+++... ...+++++|.+++||+++++++.+.+.+.+++++++.
T Consensus 276 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~i~~~ 353 (570)
T 3c5e_A 276 TFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDL--SSYKFPHLQNCVTVGESLLPETLENWRAQTGLDIRES 353 (570)
T ss_dssp EEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSCT--TTCCCTTCCEEEEESSCCCHHHHHHHHHHHSCCCEEE
T ss_pred EEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhccc--cccccccceEEEEcCCcCCHHHHHHHHHHhCCchhhc
Confidence 99876546899999999999999999999999999987632 2335789999999999999999999999999999999
Q ss_pred cCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEe-----CCccccccccCcchhhhcc
Q 014065 311 YAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIR-----GPNVTKGYKNNPEANKSAF 384 (431)
Q Consensus 311 yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~-----~~~~~~gy~~~~~~~~~~~ 384 (431)
||+||++..++.... ....++++|+|+ +++++|+|++|++++.|+.|||+++ |++++.||+++++.+.+.|
T Consensus 354 YG~TE~~~~~~~~~~---~~~~~~~vG~p~~~~~v~i~d~~g~~~~~G~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f 430 (570)
T 3c5e_A 354 YGQTETGLTCMVSKT---MKIKPGYMGTAASCYDVQIIDDKGNVLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANI 430 (570)
T ss_dssp EEETTTEEEEECCTT---SCCCTTCCCEECTTCCEEEECTTSCBCCTTCCEEEEEECSSBCCTTCCCEETTCHHHHHHTE
T ss_pred cchhhcccceecCcc---cccCCCcccccCCCceEEEECCCCCCCCCCCCCeeEEeccCCCCchhhccccCChhHhhhhh
Confidence 999999976655432 235678999999 7999999999999999999999999 9999999999999999999
Q ss_pred cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 385 LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 385 ~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.+|||+|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 431 ~~~~~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~V~p~eIE~~l 475 (570)
T 3c5e_A 431 RGDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENAL 475 (570)
T ss_dssp ETTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHHHHHHH
T ss_pred cCCccccceeEEEcCCceEEEEecCCCEEEECCEEECHHHHHHHH
Confidence 999999999999999999999999999999999999999999763
No 15
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=1.3e-69 Score=532.21 Aligned_cols=403 Identities=20% Similarity=0.286 Sum_probs=323.5
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.++|+++|+++|+++|+++.+ +++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|+++
T Consensus 74 ~~~l~~~l~~~a~~~pd~~A~~~~~-~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 152 (570)
T 4gr5_A 74 GACVHELFEAQAARAPDAVALLHEA-DELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVALLAVLKAGGGY 152 (570)
T ss_dssp SCCHHHHHHHHHHHCTTSEEEEETT-EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred cCCHHHHHHHHHHHCCCCeEEECCC-CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHHCCEE
Confidence 4689999999999999999999755 699999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|++|.++.+++.++++.++++++|++........ .. ......+.. ..............+++
T Consensus 153 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~-------~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~d 215 (570)
T 4gr5_A 153 TMLDPQFPVERLALSLEDTGAPLLVTSRPLSGRLT-------GT-TTLYVEDEA---------ASDAPAGNLATGVGPED 215 (570)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECTTTTTSSC-------SS-EEEECCC----------------CCCCCCCCCTTS
T ss_pred EEcCCCChHHHHHHHHHhcCCCEEEecchhhhccc-------CC-cceeeeccc---------cccccccccCCCCCCCC
Confidence 99999999999999999999999999876432210 00 000000000 00111112233456799
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAS 242 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 242 (431)
+++++|||||||.||+|.++|.++.+.+.. ....++.++++++..+|++|..+... ++.++..|+++++.+...+++.
T Consensus 216 ~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~~v~~~~~~~~~~ 293 (570)
T 4gr5_A 216 VACVMFTSGSTGRPKGVMSPHRALTGTYLG-QDYAGFGPDEVFLQCSPVSWDAFGLE-LFGALLFGARCVLQSGQNPDPL 293 (570)
T ss_dssp EEEEECCSSCCSSCCCEEEEHHHHHHHHSS-CCSSCCSTTCEEEECSCTTSSTHHHH-HHHHHTTTCEEEECSSSSCCHH
T ss_pred eEEEEECCcCCCCCeEEEEecHHHHHHHHh-hhhcCCCCCCEEEEecCccHHHHHHH-HHHHHhcCCEEEEcCCccCCHH
Confidence 999999999999999999999999766544 44567889999999999988766655 8889999999999875567999
Q ss_pred hHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCccc
Q 014065 243 TFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLMS 321 (431)
Q Consensus 243 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~ 321 (431)
.+++.|+++++|++.++|+++..+++.... .++++|.+++||++++++..+.+.+.+ ++++++.||+||++++.+
T Consensus 294 ~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~----~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~ 369 (570)
T 4gr5_A 294 EIGELVARHGVTMLQLSASLFNFLVDEVPE----AFEGVRYAITGGEPASVPHVAKARRDHPALRLGNGYGPAESMGFTT 369 (570)
T ss_dssp HHHHHHHHHTCCEEEEEHHHHHHHHHHCGG----GGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSE
T ss_pred HHHHHHHHcCCcEEEecHHHHHHHHhhchh----hCCCceEEEEecccCCHHHHHHHHHhCCCcEEEEeechhhheeeee
Confidence 999999999999999999999999876532 378999999999999999999999888 799999999999988766
Q ss_pred CCCCC-CCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccC---------Ccee
Q 014065 322 SNPLP-EDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF---------GWFH 390 (431)
Q Consensus 322 ~~~~~-~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~---------g~~~ 390 (431)
..... .+......++|+|+ +++++|+|+++++++.|+.|||+|+||+++.||+++++.+++.|.. |||+
T Consensus 370 ~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~~~~~~~G~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~~~w~~ 449 (570)
T 4gr5_A 370 HHAVVAGDLSGTALPIGVPLAGKRAYVLDDDLKPAANGALGELYVAGAGLAHGYVSRPALTAERFVADPFAGPGGERMYR 449 (570)
T ss_dssp EEECCGGGTTSSSCCCBEECTTEEEEEECTTSCBCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECTTCCSSCCEEEE
T ss_pred eeeecccccCCCccccceeeCCCEEEEECCCCCCCCCCCcEEEEEeecccchhcCCCchhhhcccccCCCCCCCCCEEEe
Confidence 54322 12234556799999 8999999999999999999999999999999999999999988842 6999
Q ss_pred cCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 391 TGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 391 TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|||+|++|+||+++|+||+||+||++|++|+|.|||.+.
T Consensus 450 TGDlg~~d~dG~l~~~GR~~d~Ik~~G~~v~p~eIE~~l 488 (570)
T 4gr5_A 450 TGDLARRRADGVLEYVGRADDQVKIRGFRVEPGEVEARL 488 (570)
T ss_dssp EEEEEEECTTSCEEEEEC---------------------
T ss_pred CCCeEEECCCCeEEEEcccCCEEEECcEEeCHHHHHHHH
Confidence 999999999999999999999999999999999999874
No 16
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=2.2e-69 Score=526.69 Aligned_cols=417 Identities=24% Similarity=0.331 Sum_probs=339.5
Q ss_pred cHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEe
Q 014065 5 TLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAP 84 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 84 (431)
++.++|+++++ +|+++|+++.+ +++||+||+++++++|++|++.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 25 ~~~~~l~~~~~-~p~~~A~~~~~-~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vp 102 (529)
T 2v7b_A 25 FAAYLFRLNET-RAGKTAYIDDT-GSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVV 102 (529)
T ss_dssp HHHHHHHHTGG-GTTSEEEECSS-CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHhhhc-cCCceEEEeCC-CCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCceEEe
Confidence 48889999999 99999999765 79999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcc-cccccccccch-h---hhhhhccccccccccccCCCC
Q 014065 85 LNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNIS-HATATLLDADS-E---LTLSLAHSESDTNAISKLTND 159 (431)
Q Consensus 85 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~ 159 (431)
+++.++.+++.++++.++++++|++....+............ ...+....... . ..+..... ............
T Consensus 103 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 181 (529)
T 2v7b_A 103 ANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESAEHDGCQLIVSQPRESEPRLAPLFEELID-AAAPAAKAAATG 181 (529)
T ss_dssp CCTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC---CCEEEEECC------CCCBHHHHHH-TSCCCSSCCCCC
T ss_pred cCcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhhccccCceEEEecccccccccccchhhhhc-cCCCcccccCCC
Confidence 999999999999999999999999988665554443321111 11111111100 0 00110000 001111223456
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHH-HHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNL-AASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGR 238 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~ 238 (431)
++++++++|||||||.||+|.++|.++ ..........+++.++++++..+|++|.+++...++.++..|+++++.+. .
T Consensus 182 ~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~ 260 (529)
T 2v7b_A 182 CDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILGIAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAILMAE-R 260 (529)
T ss_dssp TTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCCCCCTTCEEEESSCTTSHHHHHHHTHHHHHHTCEEECCCS-C
T ss_pred CCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhccCCCCCcEEEEeecHHHHHHHHHHHHHHHhcCcEEEEecC-C
Confidence 789999999999999999999999999 56555555567888999999999999999998778889999999998742 6
Q ss_pred CChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccC
Q 014065 239 FSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATH 318 (431)
Q Consensus 239 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~ 318 (431)
+++..+++.++++++|+++++|+++..+++........ ..++|.+++||+++++++.+.+.+.+++++++.||+||++.
T Consensus 261 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~ 339 (529)
T 2v7b_A 261 PTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLPARA-DVAIRICTSAGEALPREIGERFTAHFGCEILDGIGSTEMLH 339 (529)
T ss_dssp CCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTTCCCGG-GCCCCEEEECSSCCCHHHHHHHHHHHSCCEEEEEECTTTSS
T ss_pred CCHHHHHHHHHHhCCEEEEecHHHHHHHHhCccccccc-CCceEEEEEcCCCCCHHHHHHHHHHhCCceeeeEchhhcCc
Confidence 79999999999999999999999999998765432211 24899999999999999999999999999999999999976
Q ss_pred cccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEE
Q 014065 319 LMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYF 397 (431)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~ 397 (431)
++..... .....+++|+|+ +++++|+|++|++++.|+.|||+++|++++.||+++++.+...|.+|||+|||+|++
T Consensus 340 ~~~~~~~---~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f~~~~~~TGDl~~~ 416 (529)
T 2v7b_A 340 IFLSNRA---GAVEYGTTGRPVPGYEIELRDEAGHAVPDGEVGDLYIKGPSAAVMYWNNREKSRATFLGEWIRSGDKYCR 416 (529)
T ss_dssp EEEECCT---TCCCTTSCCEECTTCEEEEECTTSCBCCTTSCEEEEEECTTCCCCBTTCHHHHHHHEETTEEEEEEEEEE
T ss_pred eeecccc---CCCccCCcccCCCCCEEEEECCCCCCCCCCCccEEEEecCCcccccCCChHHHHHhhhcCCcccCceEEE
Confidence 6555432 224567899999 899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecccccceecCCeeccccceeccc
Q 014065 398 DSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 398 ~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 417 ~~~G~l~~~GR~dd~ik~~G~~v~p~eIE~~l 448 (529)
T 2v7b_A 417 LPNGCYVYAGRSDDMLKVSGQYVSPVEVEMVL 448 (529)
T ss_dssp CTTSCEEEEEEGGGCBC----CBCHHHHHHHH
T ss_pred CCCccEEEeCccCCeEEECCEEECHHHHHHHH
Confidence 99999999999999999999999999999864
No 17
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=4.6e-69 Score=534.96 Aligned_cols=423 Identities=22% Similarity=0.290 Sum_probs=349.1
Q ss_pred cHHHHHHHHHHhcCCcceEEec-----CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhC
Q 014065 5 TLIGLLNQVIDQFSSKRALSVS-----GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRAR 79 (431)
Q Consensus 5 tl~~~l~~~a~~~p~~~a~~~~-----~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 79 (431)
++.++|+++++++|+++|+++. +++++||+||+++++++|++|+++|+++||+|+++++|++++++++|||+++|
T Consensus 77 ~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~G 156 (652)
T 1pg4_A 77 LAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIG 156 (652)
T ss_dssp HHHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCceEEEEEcCCCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 5778999999999999999973 23689999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCHHHHHHHHhcCCceEEEecCCch---------hHHHHHHHhcC--cccccccccccc--------hhhh
Q 014065 80 ATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN---------AAAQAAASKLN--ISHATATLLDAD--------SELT 140 (431)
Q Consensus 80 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~--------~~~~ 140 (431)
++++|+++.++.+++.+++++++++++|+++... ....+...... .....+.+.... ....
T Consensus 157 av~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~ 236 (652)
T 1pg4_A 157 AVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLW 236 (652)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCCCBTTEEE
T ss_pred cEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCcccccCCCcee
Confidence 9999999999999999999999999999987642 22223222211 001111111000 0000
Q ss_pred hhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHH-HHHHHhcCCCCCeEEEecChhhHHHHHH
Q 014065 141 LSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVS-NIKSVYKLTESDSTVIVLPLFHVHGMLA 219 (431)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 219 (431)
+....... ..........++++++++|||||||.||+|+++|.+++..+. .....+++.++|++++..|++|.+++..
T Consensus 237 ~~~~~~~~-~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~ 315 (652)
T 1pg4_A 237 WRDLIEKA-SPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSY 315 (652)
T ss_dssp HHHHHTTS-CSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHH
T ss_pred HHHHHhhc-CCCCCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhcCCCCCCEEEEccCCeeeechHH
Confidence 11100000 011122234578999999999999999999999999887664 4556788999999999999999999977
Q ss_pred HHHHHHhcCCEEEeCCCC--CCChhhHHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCCcHHHH
Q 014065 220 GLLSSFAAGAAVTLPAAG--RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVIL 296 (431)
Q Consensus 220 ~~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~~ 296 (431)
.++.+|..|+++++.+.. .+++..+++.|+++++|+++++|++++.+.+.... ....+++++|.+++||++++++++
T Consensus 316 ~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~ 395 (652)
T 1pg4_A 316 LLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAW 395 (652)
T ss_dssp TTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHH
T ss_pred HHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccccccCCcCceEEEEEecCCCCHHHH
Confidence 789999999999997642 25899999999999999999999999999887542 224468999999999999999999
Q ss_pred HHHHHHhC---CceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeC--Cccc
Q 014065 297 SRLEEAFG---APVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRG--PNVT 370 (431)
Q Consensus 297 ~~~~~~~~---~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~--~~~~ 370 (431)
+++.+.++ +++++.||+||+++.++.... .......+++|+|+ |++++|+|++|++++.|+.|||+++| |+++
T Consensus 396 ~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~-~~~~~~~~s~G~p~~g~~v~i~d~~g~~v~~g~~GEl~i~g~~p~~~ 474 (652)
T 1pg4_A 396 EWYWKKIGKEKCPVVDTWWQTETGGFMITPLP-GAIELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSWPGQA 474 (652)
T ss_dssp HHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCT-TTCCBCTTCCBSBCTTCCEEEECTTCCBCCSSEEEEEEECSCCTTCC
T ss_pred HHHHHHhCCCCCcEEccccCcccccceecCCC-CCcCccCCccccCcCCCeEEEECCCCCCcCCCceEEEEEccCCCchh
Confidence 99999997 899999999999977666532 22345678999999 89999999999999999999999999 7999
Q ss_pred cccccCcchhhhcc---cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 371 KGYKNNPEANKSAF---LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 371 ~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.||+++++.+.+.+ .+|||+|||+|++|+||+++|.||.||+||++|++|+|.|||.+.
T Consensus 475 ~gY~~~~e~~~~~~~~~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eIE~~l 536 (652)
T 1pg4_A 475 RTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESAL 536 (652)
T ss_dssp CEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHH
T ss_pred hhhcCCHHHHHhhhhhcCCCEEECCcEEEEcCCCcEEEEecCCCEEEECCEEECHHHHHHHH
Confidence 99999998887765 369999999999999999999999999999999999999999863
No 18
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=2.7e-69 Score=524.00 Aligned_cols=409 Identities=21% Similarity=0.293 Sum_probs=345.0
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
||+.++|+++|+++|+++|+++.+ +++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++++
T Consensus 1 m~l~~~l~~~a~~~p~~~A~~~~~-~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v 79 (512)
T 3fce_A 1 MKLLEQIEKWAAETPDQTAFVWRD-AKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGCVKAGHAYI 79 (512)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEETT-EEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHHHHTTCCEE
T ss_pred CcHHHHHHHHHHHCCCceEEEeCC-ceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEE
Confidence 589999999999999999999866 6999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCCe
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSDV 163 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (431)
|+++.++.+++.++++.+++++++++...... ...... ............. ......+.....++++
T Consensus 80 pl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~--------~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~ 146 (512)
T 3fce_A 80 PVDLSIPADRVQRIAENSGAKLLLSATAVTVT--------DLPVRI---VSEDNLKDIFFTH--KGNTPNPEHAVKGDEN 146 (512)
T ss_dssp EEETTSCHHHHHHHHHHSCCCEEEESSCCCSS--------CCSSEE---EETHHHHHHHHHT--TTCCCCGGGSCCTTSE
T ss_pred eeCCCCcHHHHHHHHHhcCCCEEEecCccccc--------ccccce---echhhhhhhcccc--cccCCCccccCCCCCe
Confidence 99999999999999999999999998543210 000000 0000000000000 1111122344567999
Q ss_pred EEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-CCChh
Q 014065 164 ALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG-RFSAS 242 (431)
Q Consensus 164 ~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~~ 242 (431)
++++|||||||.||+|.++|.++.+.+......+++.+++++++.+|++|.+++.. ++.++..|+++++.+.. .+++.
T Consensus 147 a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~~ 225 (512)
T 3fce_A 147 FYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDFNLQTGQVFLNQAPFSFDLSVMD-IYPSLVTGGTLWAIDKDMIARPK 225 (512)
T ss_dssp EEEEEECC----CEEEEEEHHHHHHHHHHHHHHTTCCSSCEEEECSCTTSGGGHHH-HHHHHHTTCEEEECCHHHHHSHH
T ss_pred EEEEECCCCCCCCceEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHhHHHHH-HHHHHhCCCEEEECCHHHhhCHH
Confidence 99999999999999999999999999998889999999999999999999999876 89999999999998721 15899
Q ss_pred hHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCccc
Q 014065 243 TFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLMS 321 (431)
Q Consensus 243 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~~ 321 (431)
.+++.++++++|++.++|++++.++...... ..+++++|.+++||+++++++.+++.+.| ++++++.||+||+++.++
T Consensus 226 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~ 304 (512)
T 3fce_A 226 DLFASLEQSDIQVWTSTPSFAEMCLMEASFS-ESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPTEATVAVT 304 (512)
T ss_dssp HHHHHHHHHCCCEEEECHHHHHHHTTSTTCS-TTTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSE
T ss_pred HHHHHHHHcCCcEEEecHHHHHHHHhhcccc-chhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCcccChhhhhee
Confidence 9999999999999999999999988765443 34588999999999999999999999999 899999999999998766
Q ss_pred CCCCCCC--CCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc----CCceecCce
Q 014065 322 SNPLPED--GPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL----FGWFHTGDI 394 (431)
Q Consensus 322 ~~~~~~~--~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~----~g~~~TGD~ 394 (431)
....... ......++|+|. +++++|+|++|++++.|+.|||+++||+++.||+++++.+++.|. +|||+|||+
T Consensus 305 ~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDl 384 (512)
T 3fce_A 305 GIHVTEEVLDQYKSLPVGYCKSDCRLLIMKEDGTIAPDGEKGEIVIVGPSVSVGYLGSPELTEKAFTMIDGERAYKTGDA 384 (512)
T ss_dssp EEECCHHHHHHCSSCCCEEECTTCEEEEECSSSCBCCTTSCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEE
T ss_pred eEEeccccccccCCCccccccCCcEEEEECCCCCCCCCCCeEEEEEeccccChhhcCCchhhhhccccCCCCEEEeCCce
Confidence 5432111 123567899999 899999999999999999999999999999999999999999884 469999999
Q ss_pred EEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 395 GYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 395 ~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|++ +||++++.||.||+||++|++|+|.|||.+.
T Consensus 385 g~~-~dG~l~i~GR~~d~ik~~G~~v~p~eIE~~l 418 (512)
T 3fce_A 385 GYV-ENGLLFYNGRLDFQIKLHGYRMELEEIEHHL 418 (512)
T ss_dssp EEE-ETTEEEEEEEGGGCEEETTEEECHHHHHHHH
T ss_pred EEe-cCCEEEEecccCCEEEECCEEECHHHHHHHH
Confidence 999 8999999999999999999999999999763
No 19
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=5.7e-69 Score=525.77 Aligned_cols=403 Identities=20% Similarity=0.312 Sum_probs=336.7
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..|+.++|+++++++|+++|+++.+ +++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 38 ~~~l~~~l~~~a~~~p~~~Al~~~~-~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~ 116 (563)
T 1amu_A 38 DKTIHQLFEEQVSKRPNNVAIVCEN-EQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAY 116 (563)
T ss_dssp TCCHHHHHHHHHHHCTTSEEEEETT-EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred CCcHHHHHHHHHHHCCCCeEEEeCC-ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 4689999999999999999999755 799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|++|.++.+++.++++.++++++|++.+....... .........+.. . .+.. ...........+++
T Consensus 117 vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~----~~~~~~~~~~~~-~---~~~~-----~~~~~~~~~~~~~d 183 (563)
T 1amu_A 117 VPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHN----IQFNGQVEIFEE-D---TIKI-----REGTNLHVPSKSTD 183 (563)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTT----SCCCSEEEECCC-S---TTTT-----SCCSCCCCCCCTTS
T ss_pred EEeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhh----ccccCceeeecc-h---hhcc-----ccCccCCCCCCCCC
Confidence 999999999999999999999999998765432211 111100110100 0 0000 00111123346789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-CCCh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG-RFSA 241 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~ 241 (431)
+++++|||||||.||+|.++|.++.+.+......+++.++|++++.+|++|..+++. ++.++..|+++++.+.. .+++
T Consensus 184 ~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~~v~~~~~~~~~~ 262 (563)
T 1amu_A 184 LAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWE-MFMALLTGASLYIILKDTINDF 262 (563)
T ss_dssp EEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHHH-HHHHHTTTCEEEECCHHHHTCH
T ss_pred eEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHH-HHHHHHCCCEEEEcChHhhcCH
Confidence 999999999999999999999999988888888889999999999999999998875 78899999999987621 1588
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCccc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLMS 321 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~~ 321 (431)
..+++.++++++|++.++|+++..+... .++++|.+++||+++++++.+.+.+. +++++.||+||++.+++
T Consensus 263 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~-------~~~~lr~~~~gG~~l~~~~~~~~~~~--~~~~~~YG~TE~~~~~~ 333 (563)
T 1amu_A 263 VKFEQYINQKEITVITLPPTYVVHLDPE-------RILSIQTLITAGSATSPSLVNKWKEK--VTYINAYGPTETTICAT 333 (563)
T ss_dssp HHHHHHHHHTTCCEEEECHHHHTTSCTT-------TCCSCSEEEEESSCCCHHHHHHHTTT--SEEEEEECCGGGSSCSE
T ss_pred HHHHHHHHHcCCcEEEeCHHHHHHHHhc-------ccccccEEEEEEecCCHHHHHHHHhC--CeEEEEECcCHHhHhhe
Confidence 9999999999999999999998776432 35789999999999999999998763 78999999999997766
Q ss_pred CCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccC-------CceecCc
Q 014065 322 SNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLF-------GWFHTGD 393 (431)
Q Consensus 322 ~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------g~~~TGD 393 (431)
.............++|+|+ +++++|+|++|++++.|+.|||+++||+++.||+++++.+++.|.+ +||+|||
T Consensus 334 ~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~g~~w~~TGD 413 (563)
T 1amu_A 334 TWVATKETIGHSVPIGAPIQNTQIYIVDENLQLKSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGD 413 (563)
T ss_dssp EEECCSSCCCSSCCCBEECTTEEEEEECTTSCBCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEE
T ss_pred eeecccccCCCCCcccceeCCCEEEEECCCcCCCCCCCcEEEEEechhhChhhCCCchhhhhhcccCCCCCCCEEEecCC
Confidence 5433222334567899999 8999999999999999999999999999999999999999888843 4999999
Q ss_pred eEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 394 IGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 394 ~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 414 lg~~d~dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l 449 (563)
T 1amu_A 414 QARWLSDGNIEYLGRIDNQVKIRGHRVELEEVESIL 449 (563)
T ss_dssp EEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHHHH
T ss_pred EEEEcCCCeEEEeccccCEEEECCEEeCHHHHHHHH
Confidence 999999999999999999999999999999999864
No 20
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=1.7e-68 Score=531.07 Aligned_cols=425 Identities=20% Similarity=0.304 Sum_probs=348.4
Q ss_pred ccHHHHHHHHHHhcCCcceEEec-----CCCcccHHHHHHHHHHHHHHHH-HcCCCCCCEEEEECCCcHHHHHHHHHHHH
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVS-----GKFDLTYSRIHELVERAASRLV-AAGINAGDVVALTFPNTVEFVIMFLAVIR 77 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~-----~~~~~Ty~el~~~~~~~a~~L~-~~gl~~gd~V~i~~~n~~~~~~~~lA~~~ 77 (431)
.++.++|+++++++|+++|+++. +++++||+||.++++++|++|+ ++|+++||+|+++++|++++++++|||++
T Consensus 82 n~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~lA~~~ 161 (663)
T 1ry2_A 82 NACYNCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISR 161 (663)
T ss_dssp CHHHHHTHHHHTTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhccCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 36788999999999999999973 2368999999999999999999 99999999999999999999999999999
Q ss_pred hCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchh---------HHHHHHHhcCcccccccccccc---------hhh
Q 014065 78 ARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA---------AAQAAASKLNISHATATLLDAD---------SEL 139 (431)
Q Consensus 78 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---------~~~ 139 (431)
+|++++|+++.++.+++.+++++++++++|+++.... .+.+...........+.+.... ...
T Consensus 162 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~ 241 (663)
T 1ry2_A 162 IGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAFHAPRDL 241 (663)
T ss_dssp TTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCCCCSSSEE
T ss_pred cCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCCCCccccCCCccc
Confidence 9999999999999999999999999999999876432 2222222111111111111000 000
Q ss_pred hhhhccccccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHH-HHHHHhcCCCCCeEEEecChhhHHHHH
Q 014065 140 TLSLAHSESDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVS-NIKSVYKLTESDSTVIVLPLFHVHGML 218 (431)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~ 218 (431)
.+..... ............++++++++|||||||.||+|+++|.+++..+. .....+++.++|++++..|++|.+++.
T Consensus 242 ~~~~~~~-~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~ 320 (663)
T 1ry2_A 242 DWATEKK-KYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGWITGHT 320 (663)
T ss_dssp EHHHHHT-TSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSCTTSHHHHH
T ss_pred cHHHHHh-hcCCCCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhcCCCCCcEEEEcCCcHHhhhhH
Confidence 0110000 00011122334578999999999999999999999999876654 455678899999999999999999987
Q ss_pred HHHHHHHhcCCEEEeCCCC--CCChhhHHHHHHHhcceeeecchHHHHHHHhcccC-CCCCCCCCccEEEeccCCCcHHH
Q 014065 219 AGLLSSFAAGAAVTLPAAG--RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA-KPEPVYPKLRFIRSCSASLAPVI 295 (431)
Q Consensus 219 ~~~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~~~~~~~l~~i~~~g~~~~~~~ 295 (431)
..++.+|..|+++++.+.. .+++..+++.|+++++|+++++|++++.+.+.... ....+++++|.+++||+++++++
T Consensus 321 ~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~ 400 (663)
T 1ry2_A 321 YVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKSLRCLGSVGEPIAAEV 400 (663)
T ss_dssp HTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTTSSSSCCCTTCCEEEECSSCCCHHH
T ss_pred HHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCccccccCCcCceEEEEEEcCCCCHHH
Confidence 7789999999999987632 25899999999999999999999999999876542 12346899999999999999999
Q ss_pred HHHHHHHhC---CceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECC-CCCcCCC-CceeeEEEeC--C
Q 014065 296 LSRLEEAFG---APVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDE-IGVPQEG-GAKGEVCIRG--P 367 (431)
Q Consensus 296 ~~~~~~~~~---~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~-~~~~~~~-~~~Gel~v~~--~ 367 (431)
++++.+.++ +++++.||+||+++.++...........++++|+|+ |++++|+|+ +|++++. |+.|||+++| |
T Consensus 401 ~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~v~~~g~~Gel~i~g~~p 480 (663)
T 1ry2_A 401 WEWYSEKIGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMKPGSASFPFFGIDAVVLDPNTGEELNTSHAEGVLAVKAAWP 480 (663)
T ss_dssp HHHHHHTTSCSSSCEEECBCCTTTCSCSEECCTTTCCCCCTTCCCEECTTCCEEEECSSSTTCEECSSCEEEEEESSCCT
T ss_pred HHHHHHHhCCCCceEEEeECCccccCeeeccCCCCCcccCCCccccCcCCCeEEEEcCCCCCcCCCCCcceEEEEecCCC
Confidence 999999887 899999999999977666532122345678999999 899999998 8999988 9999999999 5
Q ss_pred ccccccccCcchhhhccc---CCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 368 NVTKGYKNNPEANKSAFL---FGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 368 ~~~~gy~~~~~~~~~~~~---~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+++.||+++++.+.+.|. +|||+|||+|++|+||+++|.||.||+||++|++|+|.|||.+.
T Consensus 481 ~~~~gy~~~~~~~~~~~~~~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eIE~~l 545 (663)
T 1ry2_A 481 SFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAI 545 (663)
T ss_dssp TSCCEETTCHHHHHHHHTSSSTTSEEEEEEEEECTTCCEEECSCTTSCBCSSSCCBCHHHHHHHH
T ss_pred chhcccccChHHHHHhhhcCCCCEEEcCCEEEEcCCCCEEEEeecCCEEEECCEEcCHHHHHHHH
Confidence 899999999998877763 69999999999999999999999999999999999999999864
No 21
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=2.5e-68 Score=527.53 Aligned_cols=419 Identities=23% Similarity=0.337 Sum_probs=350.8
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
.++|+.++|+++|+ ||++|+++.+ +++||+||+++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 25 ~~~~l~~~~~~~a~--pd~~Av~~~~-~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~lA~l~aG~~ 101 (617)
T 3rg2_A 25 QDLPLTDILTRHAA--SDSIAVIDGE-RQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVA 101 (617)
T ss_dssp CCCCTTHHHHTTTT--CCSEEEEETT-EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCE
T ss_pred CcCCHHHHHHHhhC--CCCeEEecCC-ceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhcCeE
Confidence 46789999999887 9999999755 79999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCch-----hHHHHHHHhcCcccccccccccchhhhhhhccccccccccccC
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN-----AAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKL 156 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (431)
++|++|..+.+++.++++.+++++++++.... ....................+. ....+..... .........
T Consensus 102 ~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 179 (617)
T 3rg2_A 102 PVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDS-GEHNLQDAIN-HPAEDFTAT 179 (617)
T ss_dssp EEEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETCC-STTBHHHHHH-SCCSSCCCC
T ss_pred EccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeecccc-cccchhhhhc-ccccccCCC
Confidence 99999999999999999999999999997653 2222222222111111111111 1000100000 011112233
Q ss_pred CCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHH-HHHHHHhcCCEEEeCC
Q 014065 157 TNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLA-GLLSSFAAGAAVTLPA 235 (431)
Q Consensus 157 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~l~~G~~~~~~~ 235 (431)
...++++++++|||||||.||+|.++|.++.+.+......+++.+++++++.+|++|.+++.. .++.++..|+++++.+
T Consensus 180 ~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~~ 259 (617)
T 3rg2_A 180 PSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAA 259 (617)
T ss_dssp CCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEECS
T ss_pred CCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEeC
Confidence 456789999999999999999999999999999999999999999999999999999988765 5888999999999987
Q ss_pred CCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCC-CCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcc
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP-EPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMT 314 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~-~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~t 314 (431)
..++..+++.++++++|++.++|+++..+++...... ...++++|.+++||+++++++.+++.+.++++++|.||+|
T Consensus 260 --~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~~~~YG~t 337 (617)
T 3rg2_A 260 --DPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMA 337 (617)
T ss_dssp --SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEESSCCCHHHHHHHHHHTCSEEEEEEEET
T ss_pred --CCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcCCcCCHHHHHHHHHHhCCcEEEEeccC
Confidence 6789999999999999999999999999988754332 2358899999999999999999999999999999999999
Q ss_pred cccCcccCCCCCCCCCCCCCCccccc--cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcc-cCCceec
Q 014065 315 EATHLMSSNPLPEDGPHKPGSVGRPV--GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF-LFGWFHT 391 (431)
Q Consensus 315 E~~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~T 391 (431)
|++..+..... .......++|+|+ +.+++|+|+++++++.|+.|||+++|+++++||+++++.+++.| .++||+|
T Consensus 338 E~~~~~~~~~~--~~~~~~~~~G~p~~~~~~~~i~d~~~~~~p~G~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~~~yrT 415 (617)
T 3rg2_A 338 EGLVNYTRLDD--SAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCS 415 (617)
T ss_dssp TEEEEECCTTS--CHHHHHHCCCEESCTTCEEEEECTTSCBCCTTCCEEEEEECSSSCSCCTTCHHHHHHHBCTTSCEEE
T ss_pred cceeecccCCC--cccccccCCCccCCCCceEEEECCCCCCCCCCCceEEEecCccccchhcCChhhhhhccCCCCceec
Confidence 99865543321 1122335789997 47999999999999999999999999999999999999999999 5799999
Q ss_pred CceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 392 GDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 392 GD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+|++++||.+++.||.||+||++|++|+|.|||.+.
T Consensus 416 GDl~~~~~dG~l~~~GR~dd~iki~G~ri~~~eIE~~l 453 (617)
T 3rg2_A 416 GDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENLL 453 (617)
T ss_dssp EEEEEECTTSCEEEEEECSSEEEETTEEEEHHHHHHHH
T ss_pred CceEEEcCCceEEEEeecCCEEEECCEEeCHHHHHHHH
Confidence 99999999999999999999999999999999999864
No 22
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=4.4e-68 Score=515.09 Aligned_cols=407 Identities=22% Similarity=0.320 Sum_probs=345.9
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAA-GINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~-gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
+|+.++|+++|+++|+++|+++.+ +++||+||.++++++|++|++. |.++||+|+++++|++++++++|||+++|+++
T Consensus 1 m~l~~~l~~~a~~~p~~~Al~~~~-~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 79 (511)
T 3e7w_A 1 MKLLHAIQTHAETYPQTDAFRSQG-QSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKAGHPY 79 (511)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEETT-EEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHHTCCE
T ss_pred CcHHHHHHHHHHHCCCCeEEEcCC-ceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHHHhCCEE
Confidence 589999999999999999999755 7999999999999999999985 88899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|+++.++.+++.++++.++++++|++...... ......... ... .+... ............+++
T Consensus 80 vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~------~~~~~~~~~-----~~~-~~~~~---~~~~~~~~~~~~~~~ 144 (511)
T 3e7w_A 80 IPVDLSIPSERIAKIIESSGAELLIHAAGLSID------AVGQQIQTV-----SAE-ELLEN---EGGSVSQDQWVKEHE 144 (511)
T ss_dssp EEEETTSCHHHHHHHHHHHTCCEEEESSSCCTT------CCCCSSCEE-----EHH-HHHTS---CSCCCCGGGSCCTTS
T ss_pred EecCCCChHHHHHHHHHhCCCCEEEecccccch------hccccccee-----cHh-hhhcc---ccCCccccccCCCCC
Confidence 999999999999999999999999997643210 000000000 000 00000 111122233456789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-CCCh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG-RFSA 241 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~ 241 (431)
+++++|||||||.||+|.++|.++...+......+++.+++++++.+|++|.+++.. ++.++..|+++++.+.. .+++
T Consensus 145 ~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~G~~~~~~~~~~~~~~ 223 (511)
T 3e7w_A 145 TFYIIYTSGSTGNPKGVQISAANLQSFTDWICADFPVSGGKIFLNQAPFSFDLSVMD-LYPCLQSGGTLHCVTKDAVNKP 223 (511)
T ss_dssp EEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHSTTTTTCEEEECSCTTSTHHHHH-HHHHHHTTCEEEECCHHHHHSH
T ss_pred eEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCccceEEEeCCccHHHHHHH-HHHHHhcCCEEEEcChhhhcCH
Confidence 999999999999999999999999999998888999999999999999999999766 89999999999987621 1588
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccccCcc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEATHLM 320 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~~~~~ 320 (431)
..+++.++++++|++.++|+++..+++..... ...++++|.+++||+++++++.+.+.+.| ++++++.||+||+++.+
T Consensus 224 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~ 302 (511)
T 3e7w_A 224 KVLFEELKKSGLNVWTSTPSFVQMCLMDPGFS-QDLLPHADTFMFCGEVLPVSVAKALLERFPKAKIFNTYGPTEATVAV 302 (511)
T ss_dssp HHHHHHHHHHCCSEEEECHHHHHHHHTSTTCS-TTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECCCCGGGSSCS
T ss_pred HHHHHHHHHcCCcEEEecHHHHHHHHhccccc-cccCCcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCcccchheeee
Confidence 99999999999999999999999998775433 34578999999999999999999999999 89999999999999876
Q ss_pred cCCCCCCC--CCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc--CC--ceecCc
Q 014065 321 SSNPLPED--GPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL--FG--WFHTGD 393 (431)
Q Consensus 321 ~~~~~~~~--~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~g--~~~TGD 393 (431)
+......+ ......++|+|+ +++++|+|++|++++.|+.|||+++||+++.||+++++.+++.|. +| ||+|||
T Consensus 303 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~g~~~~~TGD 382 (511)
T 3e7w_A 303 TSVEITNDVISRSESLPVGFAKPDMNIFIMDEEGQPLPEGEKGEIVIAGPSVSRGYLGEPELTEKAFFSHEGQWAYRTGD 382 (511)
T ss_dssp EEEEECHHHHTTCSSCCCBEECTTCEEEEECTTSCBCCTTCCEEEEEESTTSCCCBTTCHHHHHHHEEESSSSEEEEEEE
T ss_pred eEEeccccccccCCcCCCcceeCCCEEEEECCCCCCCCCCCceEEEEecCccChhhCCCcccchhhhcCCCCCEEEeCCC
Confidence 65432111 234556799999 899999999999999999999999999999999999999999883 44 899999
Q ss_pred eEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 394 IGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 394 ~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|++ +||++++.||.||+||++|++|+|.|||.+.
T Consensus 383 lg~~-~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l 417 (511)
T 3e7w_A 383 AGFI-QDGQIFCQGRLDFQIKLHGYRMELEEIEFHV 417 (511)
T ss_dssp EEEE-ETTEEEEEEESSSEEEETTEEEEHHHHHHHH
T ss_pred eEEc-cCCeEEEEccccCEEEECCEEeCHHHHHHHH
Confidence 9999 6999999999999999999999999999763
No 23
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=1.6e-68 Score=519.87 Aligned_cols=411 Identities=20% Similarity=0.268 Sum_probs=339.2
Q ss_pred CCcccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 1 MEGVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 1 m~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
|...|+.+.|+++|+++|+++|+.+.+ +++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 1 m~~~~l~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 79 (521)
T 3l8c_A 1 MSLKDMIDSIEQFAQTQADFPVYDCLG-ERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVALTKSGH 79 (521)
T ss_dssp -CCCCHHHHHHHHHHHSTTSEEEEETT-EEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHHCCCCcceecCC-CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 677899999999999999999999755 7999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCC
Q 014065 81 TAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDP 160 (431)
Q Consensus 81 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (431)
+++|+++.++.+++.++++.++++++|++++...... .. ..... ........ ............+
T Consensus 80 v~vpl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~~~------~~--~~~~~---~~~~~~~~----~~~~~~~~~~~~~ 144 (521)
T 3l8c_A 80 AYIPVDVHSAPERILAIIEIAKPSLIIAIEEFPLTIE------GI--SLVSL---SEIESAKL----AEMPYERTHSVKG 144 (521)
T ss_dssp CEEEEETTSCHHHHHHHHHHSCCSEEEESSCCCSCCT------TS--EEEEH---HHHHHHHH----HTCCCCCSSCCCT
T ss_pred EEEecCccccHHHHHHHHHhCCCCEEEecCccccccc------cC--cccch---hhhhhccc----ccCCcccCCCCCC
Confidence 9999999999999999999999999999876432110 00 00000 00000000 0011122334567
Q ss_pred CCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH--hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-
Q 014065 161 SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV--YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG- 237 (431)
Q Consensus 161 ~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~- 237 (431)
+++++++|||||||.||+|.++|.++.+.+...... +++.++++++...|++|..++.. ++.++..|+++++.+..
T Consensus 145 ~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~l~~G~~~~~~~~~~ 223 (521)
T 3l8c_A 145 DDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSVMY-WAPTLALGGTLFALPKEL 223 (521)
T ss_dssp TSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTCCCSSCEEECCSCTTSGGGHHH-HHHHHHTTCEEEECCGGG
T ss_pred CCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccCCCCCCeEEecCCccHHHHHHH-HHHHHhcCCEEEEcCHHH
Confidence 999999999999999999999999999887766655 67788999999999999988766 88899999999987631
Q ss_pred CCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCceecccCcccc
Q 014065 238 RFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVLEAYAMTEA 316 (431)
Q Consensus 238 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~~~yg~tE~ 316 (431)
..++..+++.+.+++++++.++|+++..+....... ...++++|.+++||++++++..+.+.+.+ ++++++.||+||+
T Consensus 224 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~ 302 (521)
T 3l8c_A 224 VADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFC-QAKMPALTHFYFDGEELTVSTARKLFERFPSAKIINAYGPTEA 302 (521)
T ss_dssp TTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTCS-TTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGG
T ss_pred hhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhccc-cccCccceEEEEecccCCHHHHHHHHHHCCCceEEeCcCccHH
Confidence 238899999999999999999999999987765432 34578999999999999999999999998 8999999999999
Q ss_pred cCcccCCCCCCC--CCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc----CCce
Q 014065 317 THLMSSNPLPED--GPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL----FGWF 389 (431)
Q Consensus 317 ~~~~~~~~~~~~--~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~----~g~~ 389 (431)
++.++....... ......++|+|+ +++++|+|++|++++.|+.|||+++||+++.||+++++.+++.|. +|||
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~ 382 (521)
T 3l8c_A 303 TVALSAIEITREMVDNYTRLPIGYPKPDSPTYIIDEDGKELSSGEQGEIIVTGPAVSKGYLNNPEKTAEAFFTFKGQPAY 382 (521)
T ss_dssp SSCSEEEEECHHHHHHCSSCEEEEECTTSCEEEECTTSCBCCTTCCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEE
T ss_pred hhhhceeecccccccCCCccccccccCCCEEEEECCCcCCCCCCCceEEEecccccChhhcCCchHhhccCcCCCCceee
Confidence 987665432111 123456899999 899999999999999999999999999999999999999998872 4799
Q ss_pred ecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 390 HTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 390 ~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 383 ~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l 422 (521)
T 3l8c_A 383 HTGDIGSLTEDNILLYGGRLDFQIKYAGYRIELEDVSQQL 422 (521)
T ss_dssp EEEEEEEECSSSCEEEEEEGGGBCC-----CBHHHHHHHH
T ss_pred eCCCEEEEeCCCeEEEeCcccceEeECCEEeCHHHHHHHH
Confidence 9999999999999999999999999999999999999863
No 24
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=2.4e-67 Score=546.24 Aligned_cols=422 Identities=29% Similarity=0.422 Sum_probs=342.1
Q ss_pred cccHHHHHHHHHHhcCCcceEEecC-CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSG-KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARAT 81 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~-~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 81 (431)
..|+.++|.++++++|+++|+++.+ ++++||+||+++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 60 ~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~e~~v~~lA~~~~Ga~ 139 (979)
T 3tsy_A 60 HLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGAT 139 (979)
T ss_dssp TSCHHHHHTTTGGGTTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCHHHHHHHHHHHHHTCE
T ss_pred CCCHHHHHHHHHHhCCCCeEEEECCCCcEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCHHHHHHHHHHHHcCCE
Confidence 4789999999999999999999753 579999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccccccccccc------chhhhhhhccccc--ccccc
Q 014065 82 AAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDA------DSELTLSLAHSES--DTNAI 153 (431)
Q Consensus 82 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~--~~~~~ 153 (431)
++|++|.++.+++.++++.++++++|++....+.+.......... .+.+.+. .....+....... .....
T Consensus 140 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (979)
T 3tsy_A 140 ATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDDGVV--IVCIDDNESVPIPEGCLRFTELTQSTTEASEVI 217 (979)
T ss_dssp EEEECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHTSCCE--EEECCCCTTSCCCTTEEEGGGTSSCCSGGGGGS
T ss_pred EEeeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhcCCce--EEEeCCcccccCCcccccHHHHhhccccccccC
Confidence 999999999999999999999999999988776665554433221 1111111 0001111111100 01122
Q ss_pred ccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH----HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCC
Q 014065 154 SKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS----VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGA 229 (431)
Q Consensus 154 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~ 229 (431)
......++++++++|||||||.||+|.++|.++...+..... .+++.+++++++.+|++|.+++...++.++..|+
T Consensus 218 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~ 297 (979)
T 3tsy_A 218 DSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGA 297 (979)
T ss_dssp CCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTC
T ss_pred CcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchHHHHHHHHHHHHHHhcCc
Confidence 334467899999999999999999999999999988766543 4567889999999999999999887899999999
Q ss_pred EEEeCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh-CCcee
Q 014065 230 AVTLPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF-GAPVL 308 (431)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~-~~~i~ 308 (431)
++++.+ .+++..+++.++++++|++.++|+++..+++..... ..+++++|.+++||+++++++.+++.+.| +++++
T Consensus 298 ~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~l~ 374 (979)
T 3tsy_A 298 AILIMP--KFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETE-KYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLG 374 (979)
T ss_dssp EEEECS--SCCHHHHHHHHHHHTCCEEEECHHHHHHHHHCGGGG-TSCCTTCCEEEESSCCCCSSHHHHHHHHCTTCEEE
T ss_pred EEEEeC--CCCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCcccc-CCCccceEEEEEcCCCCCHHHHHHHHHHCCCCeEE
Confidence 999987 789999999999999999999999999998876543 34579999999999999999999999999 89999
Q ss_pred cccCcccccCcccCCCC--CCCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhcc
Q 014065 309 EAYAMTEATHLMSSNPL--PEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAF 384 (431)
Q Consensus 309 ~~yg~tE~~~~~~~~~~--~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 384 (431)
+.||+||++++++.... ........+++|+|+ +++++|+| ++|++++.|+.|||+|+||++++||+++++.+++.|
T Consensus 375 ~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~GEl~i~g~~v~~GY~~~p~~t~~~f 454 (979)
T 3tsy_A 375 QGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKGYLNNPAATAETI 454 (979)
T ss_dssp ECEECGGGCSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTSCCBCCTTCCEEEEEESTTSCSEETTCHHHHHHHB
T ss_pred eeechhhhhHHHHhCCCCCCCccccCCCCcCcccCCcEEEEEeCCCCCCCCCCCccEEEEECCCccccccCChhhhhhhc
Confidence 99999999977654321 122345678999999 89999999 559999999999999999999999999999999998
Q ss_pred -cCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 385 -LFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 385 -~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
.+|||+|||+|++|+||+++++||.||+||++|++|+|.|||.+.
T Consensus 455 ~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l 500 (979)
T 3tsy_A 455 DKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALL 500 (979)
T ss_dssp CTTSCEEEEEEEEECTTSCEEEEEESCC------------------
T ss_pred cCCCcEEcCCEEEEcCCceEEEecCCCCEEEECCEEECHHHHHHHH
Confidence 579999999999999999999999999999999999999999874
No 25
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=4.3e-68 Score=525.04 Aligned_cols=418 Identities=21% Similarity=0.310 Sum_probs=344.7
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecC---CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHh
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSG---KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRA 78 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~---~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 78 (431)
..+|+.++|+++|+++|+++|+++.+ ++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++
T Consensus 9 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 88 (590)
T 3kxw_A 9 QCQSLVDVVRLRALHSPNKKSCTFLNKELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAFLGCLYA 88 (590)
T ss_dssp TCSSHHHHHHHHHHHCTTSEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHT
T ss_pred CcccHHHHHHHHHHhCCCCeEEEEEcCCeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHh
Confidence 46899999999999999999998743 479999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCC---HHHHHHHHhcCCceEEEecCCchhHHHHHH-HhcCcccccccccccchhhhhhhccccccccccc
Q 014065 79 RATAAPLNAAYT---PDEFEFYLSDSESKLLLTPAEGNAAAQAAA-SKLNISHATATLLDADSELTLSLAHSESDTNAIS 154 (431)
Q Consensus 79 G~~~v~l~~~~~---~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (431)
|++++|++|..+ .+++.++++.+++++++++.+......... ....... ...... ..... ........
T Consensus 89 G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~-~~~~~~~~ 160 (590)
T 3kxw_A 89 GCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFL-KIPAIA------LESIE-LNRSSSWQ 160 (590)
T ss_dssp TCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEET-TEEEEE------GGGCC-GGGGGGCC
T ss_pred CcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhccccc-ccceee------chhcc-ccccccCC
Confidence 999999999884 578999999999999999876443332111 1000000 000000 00000 01111122
Q ss_pred cCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC
Q 014065 155 KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234 (431)
Q Consensus 155 ~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 234 (431)
.....++++++++|||||||.||+|.++|.+++..+......+++.+++++++.+|++|.+++...++.+++.|+++++.
T Consensus 161 ~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~ 240 (590)
T 3kxw_A 161 PTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMM 240 (590)
T ss_dssp CCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEEC
T ss_pred CCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEEe
Confidence 34556889999999999999999999999999999999999999999999999999999999988789999999999998
Q ss_pred CCCCC--ChhhHHHHHHHhcceeeecchHHHHHHHhcccC--CCCCCCCCccEEEeccCCCcHHHHHHHHHHhC------
Q 014065 235 AAGRF--SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA--KPEPVYPKLRFIRSCSASLAPVILSRLEEAFG------ 304 (431)
Q Consensus 235 ~~~~~--~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~------ 304 (431)
+...+ ++..+++.|+++++|++.++|.++..+++.... ....+++++|.+++||+++++++.+++.+.++
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~ 320 (590)
T 3kxw_A 241 SPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEPVREETMEHFYQAFKEFGFRK 320 (590)
T ss_dssp CHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCG
T ss_pred CHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCCCCHHHHHHHHHHHHHcCCCc
Confidence 72112 789999999999999999999999998876322 22445899999999999999999999999883
Q ss_pred CceecccCcccccCcccCCCCC------------------------CCCCCCCCCccccccceEEEECCC-CCcCCCCce
Q 014065 305 APVLEAYAMTEATHLMSSNPLP------------------------EDGPHKPGSVGRPVGQEIAILDEI-GVPQEGGAK 359 (431)
Q Consensus 305 ~~i~~~yg~tE~~~~~~~~~~~------------------------~~~~~~~~~~G~~~~~~~~i~d~~-~~~~~~~~~ 359 (431)
.++++.||+||++++++..... ........++|+|++. ++|+|++ +++++.|+.
T Consensus 321 ~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~-v~i~d~~~~~~~~~g~~ 399 (590)
T 3kxw_A 321 EAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE-VKIIDPDTLIPCDFDQV 399 (590)
T ss_dssp GGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE-EEEECTTTCCBCCTTBC
T ss_pred cccccccccccccceeecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC-eEEEcCCCCcCCCCCCE
Confidence 4699999999999877654321 0112234678999843 8999976 899999999
Q ss_pred eeEEEeCCccccccccCcchhhhcccC-------C--ceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 360 GEVCIRGPNVTKGYKNNPEANKSAFLF-------G--WFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 360 Gel~v~~~~~~~gy~~~~~~~~~~~~~-------g--~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|||+|+||+++.||+++++.+++.|.+ | ||+|||+|++| ||.++++||.||+||++|++|+|.|||.+.
T Consensus 400 GEl~v~g~~v~~GY~~~p~~t~~~f~~~~~~~~~g~~~~~TGDlg~~d-dG~l~~~GR~dd~Ik~~G~~v~p~eIE~~l 477 (590)
T 3kxw_A 400 GEIWVQSNSVAKGYWNQPEETRHAFAGKIKDDERSAIYLRTGDLGFLH-ENELYVTGRIKDLIIIYGKNHYPQDIEFSL 477 (590)
T ss_dssp EEEEEESTTSCCCBTTCHHHHHHHHCBCCTTC---CCBEEEEEEEEEE-TTEEEEEEESSCHHHHHHHTTHHHHHHHHH
T ss_pred EEEEEeCCcccccccCChhHHHHHHhccccCCCCCCcEEecCcEEEEE-CCEEEEEcCccceEEECCEecCHHHHHHHH
Confidence 999999999999999999999998854 5 99999999999 999999999999999999999999999763
No 26
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.5e-68 Score=513.68 Aligned_cols=407 Identities=23% Similarity=0.303 Sum_probs=334.2
Q ss_pred ccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE
Q 014065 4 VTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAA 83 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 83 (431)
+||.++|.++|+++|+++|+++.+ +++||+||.++++++|++|++. +||+|+++++|++++++++|||+++|++++
T Consensus 1 mtl~~~l~~~a~~~pd~~Al~~~~-~~~Ty~eL~~~~~~lA~~L~~~---~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v 76 (501)
T 3ipl_A 1 MSLDFWLYKQAQQNGHHIAITDGQ-ESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACWLANIEIA 76 (501)
T ss_dssp --CCCHHHHHHHHHTTSEEEECSS-CEEEHHHHHHHHHHHHHHHHTT---CCSEEEEECCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHhcCCceEEEeCC-cEEEHHHHHHHHHHHHHHHHHc---CCCEEEEEcCCCHHHHHHHHHHHHcCCEEE
Confidence 578899999999999999999755 7999999999999999999986 899999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccc-ccc----chhhhhh----hccccccccccc
Q 014065 84 PLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATL-LDA----DSELTLS----LAHSESDTNAIS 154 (431)
Q Consensus 84 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~----~~~~~~~~~~~~ 154 (431)
|+++.++.+++.++++.++++++|++....................... ... ....... ............
T Consensus 77 pl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (501)
T 3ipl_A 77 MINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITTNGLLDNTMGIQYDTSNETVVPKESPSNIL 156 (501)
T ss_dssp ECCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEETTC--------------------------------CCHHHHT
T ss_pred ecCccCCHHHHHHHHHhcCCCEEEEccccccccccccccccceeeeeecccccccccccccccccchhhccccCCccccc
Confidence 9999999999999999999999999876443221000000000000000 000 0000000 000001111122
Q ss_pred cCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC
Q 014065 155 KLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234 (431)
Q Consensus 155 ~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 234 (431)
.....++++++++|||||||.||+|.++|.++...+......+++.+++++++.+|++|.+++.. ++.++..|+++++.
T Consensus 157 ~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~l~~G~~~~~~ 235 (501)
T 3ipl_A 157 NTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSV-LLRAVIEGFTVRIV 235 (501)
T ss_dssp CCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHTCCCTTCEEEECSCTTSHHHHHH-HHHHHHHTCEEEEC
T ss_pred ccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhhCCCccCEEEEeCcHHHHHHHHH-HHHHHHcCceEEeC
Confidence 33457899999999999999999999999999999999889999999999999999999999987 88999999999998
Q ss_pred CCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcc
Q 014065 235 AAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMT 314 (431)
Q Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~t 314 (431)
+ .+++..+++.++++++|++.++|++++.+++..... ..++|.+++||+++++++.+.+.+ +++++++.||+|
T Consensus 236 ~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----~~~lr~i~~gG~~l~~~~~~~~~~-~~~~~~~~YG~T 308 (501)
T 3ipl_A 236 D--KFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHE----PYNLQKILLGGAKLSATMIETALQ-YNLPIYNSFGMT 308 (501)
T ss_dssp S--SCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCS----CTTCCEEEECSSCCCHHHHHHHHH-TTCCEEEEEEEG
T ss_pred C--CCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCC----cCcccEEEEeCCCCCHHHHHHHHH-hCCCEecccccc
Confidence 7 789999999999999999999999999998876443 238999999999999999999987 599999999999
Q ss_pred cccCcccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCc
Q 014065 315 EATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGD 393 (431)
Q Consensus 315 E~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD 393 (431)
|+++.+..... .......+++|+|+ +++++|+|++ .++.|||+++|+.++.||+++++.+.. |.+|||+|||
T Consensus 309 E~~~~~~~~~~-~~~~~~~~~~G~p~~~~~~~i~d~~-----~~~~GEl~v~g~~~~~gY~~~~~~t~~-~~~g~~~TGD 381 (501)
T 3ipl_A 309 ETCSQFLTATP-EMLHARPDTVGMPSANVDVKIKNPN-----KEGHGELMIKGANVMNGYLYPTDLTGT-FENGYFNTGD 381 (501)
T ss_dssp GGTEEEEEECH-HHHHHCTTCCBEECTTCEEEEESCC-----SSCCEEEEEESTTSCSCCSBSTTCCCS-EETTEEEEEE
T ss_pred ccccceeecCc-cccccCCCCCCCCCCCcEEEEecCC-----CCCccEEEEeccchhhhhCcChhhcch-hcCCceecCC
Confidence 99875544321 11234567899999 8999999975 456799999999999999999998877 8899999999
Q ss_pred eEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 394 IGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 394 ~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 382 l~~~~~~G~l~~~GR~dd~ik~~G~~v~p~eiE~~l 417 (501)
T 3ipl_A 382 IAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVA 417 (501)
T ss_dssp EEEECTTSCEEEEEECCCCEECSSCEECHHHHHHHH
T ss_pred EEEEcCCCeEEEEccccceEEECCEEECHHHHHHHH
Confidence 999999999999999999999999999999999763
No 27
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=1.7e-66 Score=510.12 Aligned_cols=407 Identities=18% Similarity=0.233 Sum_probs=314.1
Q ss_pred CcccHHHHHHHHHHhcCCcceEEecCC---------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHH
Q 014065 2 EGVTLIGLLNQVIDQFSSKRALSVSGK---------FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMF 72 (431)
Q Consensus 2 ~~~tl~~~l~~~a~~~p~~~a~~~~~~---------~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~ 72 (431)
..+|+.++|+++|+++|+++|+++.++ +++||+||.++++++|++|++.|+ +||+|+++++|++++++++
T Consensus 18 ~~~tl~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~~~~~ 96 (562)
T 3ite_A 18 STVPPSHYIETWAKTHPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIAFAII 96 (562)
T ss_dssp CCCCTTHHHHHHHHHCTTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHHHHHH
T ss_pred ccCCHHHHHHHHHHHCCCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHHHHHH
Confidence 568999999999999999999987432 689999999999999999999999 7999999999999999999
Q ss_pred HHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccc
Q 014065 73 LAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNA 152 (431)
Q Consensus 73 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (431)
|||+++|++++|+++.++.+++.++++.++++++|+++...... ................ ..... .....
T Consensus 97 lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~--~~~~~ 166 (562)
T 3ite_A 97 VGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGV-------ELPPETKVLDTKNQSF-IENLS--TQDTS 166 (562)
T ss_dssp HHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTC-------CCCTTCEEEETTCHHH-HHHHH--HSCCS
T ss_pred HHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEcccccccc-------ccCccceeecccchhh-hhhcc--ccccc
Confidence 99999999999999999999999999999999999987643221 0000000000000000 00000 00111
Q ss_pred cccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH--------hcCCCCCeEEEecChhhHHHHHHHHHHH
Q 014065 153 ISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV--------YKLTESDSTVIVLPLFHVHGMLAGLLSS 224 (431)
Q Consensus 153 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~--------~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 224 (431)
.......++++++++|||||||.||+|.++|.++...+..+... +.+...+++++..|++|..++.. ++.+
T Consensus 167 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 245 (562)
T 3ite_A 167 DILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIGE-MFLA 245 (562)
T ss_dssp CCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHHHH-HHHH
T ss_pred ccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhHHH-HHHH
Confidence 11233456888999999999999999999999998877665443 44778899999999999888765 7889
Q ss_pred HhcCCEEEeCCCCCC-ChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHh
Q 014065 225 FAAGAAVTLPAAGRF-SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAF 303 (431)
Q Consensus 225 l~~G~~~~~~~~~~~-~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~ 303 (431)
+..|+++++.+ .+ .+..+++.++++++|++.++|++++.+.... .+++++|.+++||+++++++.+.+.+.+
T Consensus 246 l~~g~~~~~~~--~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~~~-----~~~~~lr~~~~gG~~l~~~~~~~~~~~~ 318 (562)
T 3ite_A 246 WRFGLCAVTGE--RLSMLDDLPRTFRELGVTHAGIVPSLLDQTGLVP-----EDAPHLVYLGVGGEKMTPRTQQIWSSSD 318 (562)
T ss_dssp HHTTCEEEECC--HHHHHHSHHHHHHHTTCCEEEECHHHHHHHTCCG-----GGSTTCCEEEEESSCCCHHHHHHHTTCS
T ss_pred HhcccEEEecc--hhhCHHHHHHHHHHcCCCEEEcCHHHHhhcccCc-----cccCceEEEEEecCCCCHHHHHHHhhCC
Confidence 99999999876 33 3577889999999999999999988774332 2478999999999999999999999888
Q ss_pred CCceecccCcccccCcccCCCCCCCCCCCCCCccccc-cceEEEECC-CCCcCCCCceeeEEEeCCccccccccCcchhh
Q 014065 304 GAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDE-IGVPQEGGAKGEVCIRGPNVTKGYKNNPEANK 381 (431)
Q Consensus 304 ~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~-~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~ 381 (431)
++++++.||+||++..++..... ......++|+|+ +++++|+|+ .+.+++.|+.|||+++|++++.||+++++.+.
T Consensus 319 ~~~~~~~YG~TE~~~~~~~~~~~--~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~ 396 (562)
T 3ite_A 319 RVALVNVYGPTEVTIGCSAGRIL--PDSDTRCIGHPLGDSVAHVLAPGSNEHVKKGMAGELVIEGSLVANGYLNRPDAKG 396 (562)
T ss_dssp SCEEEEEECCGGGCSCSEEEECC--TTSCTTEEEEECTTCEEEEECTTSSCBCCTTSCEEEEEESTTSCCEESSCTTCCS
T ss_pred CcEEEEeeccchheeeeeeeeec--CCCCCccccccCCCCeEEEEeCCCCCCCCCCCceEEEEeccccchhhCCCccccc
Confidence 99999999999998776654332 234567899999 799999995 58889999999999999999999999999888
Q ss_pred hcccCC--ceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 382 SAFLFG--WFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 382 ~~~~~g--~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
..+.+| ||+|||+|++|+||++++.||.||+||++|++|+|.|||.+.
T Consensus 397 ~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~v~p~eIE~~l 446 (562)
T 3ite_A 397 FCDINGRKMYRTGDIVRMDADSSILFLGRKDEQVKVRGQRLELGEVSEVI 446 (562)
T ss_dssp EEEETTEEEEEEEEEEEECTTSCEEEEEEC--------------------
T ss_pred cccCCCCEEEecCCEEEEcCCCeEEEEccccCEEeECcEEECHHHHHHHH
Confidence 777777 999999999999999999999999999999999999999873
No 28
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=2.5e-66 Score=511.33 Aligned_cols=415 Identities=24% Similarity=0.303 Sum_probs=348.1
Q ss_pred cccHHHHHHHHHHhcCCcceEEecC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSG--KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~--~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
..|+.++|+++++++|+.+++.... ++++||+||+++++++|++|+++|+++||+|+++++|++++++++|||+++|+
T Consensus 20 ~~tl~~~l~~~a~~~p~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~ 99 (576)
T 3gqw_A 20 FPTLVDALDYAALSSAGMNFYDRRCQLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEFVEAFFACQYAGL 99 (576)
T ss_dssp CSSHHHHHHHHTTSSCEEEEECTTSCEEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHhhCCCCeEEeCCCCCceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCC
Confidence 4589999999999999988886432 37999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCC-------HHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhcccccccccc
Q 014065 81 TAAPLNAAYT-------PDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAI 153 (431)
Q Consensus 81 ~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (431)
+++|+++.++ .+++.++++.++++++|++.+.................. .. ...... .....
T Consensus 100 ~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~----~~~~~ 168 (576)
T 3gqw_A 100 VAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDNPELHVL----SH---AWFKAL----PEADV 168 (576)
T ss_dssp EEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGCTTCEEE----EH---HHHHTS----CCCCC
T ss_pred eEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccCCcceec----ch---hhhhcc----ccccc
Confidence 9999999998 789999999999999999988766655443322111100 00 000000 01111
Q ss_pred ccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH-hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEE
Q 014065 154 SKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV-YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVT 232 (431)
Q Consensus 154 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~ 232 (431)
......++++++++|||||||.||+|.++|.+++.++...... +++.+++++++.+|++|.+++...++.++..|++++
T Consensus 169 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~ 248 (576)
T 3gqw_A 169 ALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGIKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVD 248 (576)
T ss_dssp CCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHTTSCCCTTCCEEECCCTTSHHHHHHHTHHHHHTTCCEE
T ss_pred ccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhcccCCCCcceEEEcCCccccccHHHHHHHHHhcCceEE
Confidence 2234467899999999999999999999999999888876654 789999999999999999999887888999999998
Q ss_pred eCCCCC--CChhhHHHHHHHhcceeeecchHHHHHHHhcccC--CCCCCCCCccEEEeccCCCcHHHHHHHHHHh-----
Q 014065 233 LPAAGR--FSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVA--KPEPVYPKLRFIRSCSASLAPVILSRLEEAF----- 303 (431)
Q Consensus 233 ~~~~~~--~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~----- 303 (431)
+.+... +++..+++.++++++|+++++|++++.+.+.... ....+++++|.+++||+++++++.+++.+.+
T Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~ 328 (576)
T 3gqw_A 249 YLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEPISAEQLHQFAECFRQVNF 328 (576)
T ss_dssp ECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHHHHTTCCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTC
T ss_pred EcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhcccccccCChhhhHhhhccCccCCHHHHHHHHHHHhhcCC
Confidence 876212 4889999999999999999999999888665432 1234589999999999999999999999988
Q ss_pred -CCceecccCcccccCcccCCCCCCCC-------------------------CCCCCCccccc-cceEEEECCCCCcCCC
Q 014065 304 -GAPVLEAYAMTEATHLMSSNPLPEDG-------------------------PHKPGSVGRPV-GQEIAILDEIGVPQEG 356 (431)
Q Consensus 304 -~~~i~~~yg~tE~~~~~~~~~~~~~~-------------------------~~~~~~~G~~~-~~~~~i~d~~~~~~~~ 356 (431)
++++++.||+||++.+++........ .....++|+|+ +++++|+|++|++++.
T Consensus 329 ~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~ 408 (576)
T 3gqw_A 329 DNKTFMPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALPEHGIEIRNEAGMPVAE 408 (576)
T ss_dssp CGGGEEEEEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCCCCTTCCCEEEEEBCCEECTTCEEEEECTTSCBCCT
T ss_pred CcccccccCCcccccceeecccccCCccccccchhhhcccCcccccCccccCccceeecCCcCCCCeEEEECCCCCCCCC
Confidence 67899999999999887765421110 00112789999 8999999999999999
Q ss_pred CceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 357 GAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 357 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+.|||+++|+++++||+++++.+...+.+|||+|||+|++ +||++++.||.||+||++|++|+|.|||.+.
T Consensus 409 g~~GEl~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~-~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 480 (576)
T 3gqw_A 409 RVVGHICISGPSLMSGYFGDQVSQDEIAATGWLDTGDLGYL-LDGYLYVTGRIKDLIIIRGRNIWPQDIEYIA 480 (576)
T ss_dssp TBCEEEEEESTTSCCCBTTCHHHHHHHHHHSCEEEEEEEEE-ETTEEEEEEETTTCEEETTEEECHHHHHHHH
T ss_pred CCeEEEEEeCccccccccCCccccccccCCCeeeccceEEE-ECCEEEEEecCcceEEECCEEECHHHHHHHH
Confidence 99999999999999999999988888788999999999999 7999999999999999999999999999764
No 29
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=6.3e-67 Score=505.37 Aligned_cols=395 Identities=31% Similarity=0.449 Sum_probs=330.6
Q ss_pred ccHHHHHHHHHHhcCC-cceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 4 VTLIGLLNQVIDQFSS-KRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 4 ~tl~~~l~~~a~~~p~-~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
.|+.+.|.++++++|+ ++|+++.+ +++||+||.++++++|++|. .|++|+++++|++++++++|||+++|+++
T Consensus 22 ~tl~~~l~~~a~~~p~d~~Al~~~~-~~~Ty~eL~~~~~~~A~~L~-----~~~~V~i~~~~~~~~~~~~la~~~~Ga~~ 95 (505)
T 3nyq_A 22 SSLFPALSPAPTGAPADRPALRFGE-RSLTYAELAAAAGATAGRIG-----GAGRVAVWATPAMETGVAVVAALLAGVAA 95 (505)
T ss_dssp --CCTTTSSCCCSGGGGSEEEEETT-EEEEHHHHHHHHHHHHTTCC--------CEEEECCSSHHHHHHHHHHHHHTCCE
T ss_pred chhHHHHHHHHHhCCCCCeEEEECC-eeeeHHHHHHHHHHHHhhcc-----CCCEEEEEcCCCHHHHHHHHHHHHhCCEE
Confidence 4677788888889997 99999755 79999999999999998874 48899999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|++|.++.+++.++++.++++++|++.+.... ...... ..... .. ............+++
T Consensus 96 vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~-----~~~~~~-~~~~~---------~~----~~~~~~~~~~~~~~d 156 (505)
T 3nyq_A 96 VPLNPKSGDKELAHILSDSAPSLVLAPPDAELP-----PALGAL-ERVDV---------DV----RARGAVPEDGADDGD 156 (505)
T ss_dssp EEECTTCCHHHHHHHHHHHCCSEEEECTTCCCC-----GGGTTS-EEEEC---------CT----TCCCCCCCCCCCTTS
T ss_pred EEcCCCCCHHHHHHHHHHCCCCEEEECCccccc-----hhhccc-ccccc---------cc----ccccCCCCCCCCCCC
Confidence 999999999999999999999999998652100 000000 00000 00 011112233456789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSAS 242 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 242 (431)
+++++|||||||.||+|.++|.++...+......+++.+++++++.+|++|.+++...++.++..|+++++.+ .+++.
T Consensus 157 ~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~ 234 (505)
T 3nyq_A 157 PALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLG--RFSTE 234 (505)
T ss_dssp EEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECS--SCCHH
T ss_pred eEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHhCCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECC--CCChH
Confidence 9999999999999999999999999999999999999999999999999999999877899999999999987 78999
Q ss_pred hHHHHHHHhcceeeecchHHHHHHHhcccCCC--CCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCcc
Q 014065 243 TFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP--EPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHLM 320 (431)
Q Consensus 243 ~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~--~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~~ 320 (431)
.+++.+ ++++|+++++|+++..+++...... ...++++|.+++||+++++++.+++.+.+++++++.||+||++..+
T Consensus 235 ~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~ 313 (505)
T 3nyq_A 235 GAAREL-NDGATMLFGVPTMYHRIAETLPADPELAKALAGARLLVSGSAALPVHDHERIAAATGRRVIERYGMTETLMNT 313 (505)
T ss_dssp HHHHHH-TTTCCEEEECHHHHHHHHHHGGGCHHHHHHHHHCSEEEECSSCCCHHHHHHHHHHHSCCCEEEEEETTTEEEE
T ss_pred HHHHHH-hhCCeEEEehHHHHHHHHHhhhcCchhhcccccceEEEECCCCCCHHHHHHHHHhcCCeeecccchhhccccc
Confidence 999999 8899999999999999987543221 1236789999999999999999999999999999999999999776
Q ss_pred cCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCC---CceeeEEEeCCccccccccCcchhhhccc-CCceecCceE
Q 014065 321 SSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEG---GAKGEVCIRGPNVTKGYKNNPEANKSAFL-FGWFHTGDIG 395 (431)
Q Consensus 321 ~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~---~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~ 395 (431)
..... .....+++|+|+ +++++|+|++|++++. |+.|||+++|++++.||+++++.+++.|. +|||+|||+|
T Consensus 314 ~~~~~---~~~~~~~vG~p~~~~~~~i~d~~g~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~y~TGDl~ 390 (505)
T 3nyq_A 314 SVRAD---GEPRAGTVGVPLPGVELRLVEEDGTPIAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMA 390 (505)
T ss_dssp ECCTT---SCCCTTCCCEECTTCEEEEC-----CCCCCCSCCCEEEEEESTTSCCEETTCHHHHHHTBCTTSCEEEEEEE
T ss_pred ccCCC---CCCCCCCcccCCCCCEEEEECCCCCCcccCCCCceEEEEEecCchhhhhCCChhHhhhhhcCCCCCccCCeE
Confidence 65432 345678999999 8999999999998876 89999999999999999999999999995 7999999999
Q ss_pred EEcCCCeEEEeccc-ccceecCCeeccccceeccc
Q 014065 396 YFDSDGYLHLVGRI-KELINRGGNLHESISLFLAK 429 (431)
Q Consensus 396 ~~~~~g~l~~~gR~-~d~i~~~G~~i~~~~iE~a~ 429 (431)
++|+||++++.||+ ||+||++|++|+|.|||.+.
T Consensus 391 ~~~~dG~l~~~GR~~d~~ik~~G~~v~~~eIE~~l 425 (505)
T 3nyq_A 391 VRDPDGYVRIVGRKATDLIKSGGYKIGAGEIENAL 425 (505)
T ss_dssp EECTTSCEEEEEESSCCCEEETTEEECHHHHHHHH
T ss_pred EECCCccEEEeCCccCceEEeCCEEECHHHHHHHH
Confidence 99999999999998 58999999999999999864
No 30
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=7.8e-65 Score=489.71 Aligned_cols=395 Identities=22% Similarity=0.321 Sum_probs=318.2
Q ss_pred CCcccHHHHHHHHHHhcCCcceEEecC------C--CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHH
Q 014065 1 MEGVTLIGLLNQVIDQFSSKRALSVSG------K--FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMF 72 (431)
Q Consensus 1 m~~~tl~~~l~~~a~~~p~~~a~~~~~------~--~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~ 72 (431)
|..+|+.++|+++|+++|+++|+++.+ + +++||+||.++++++|++|++.|+ +||+|+++++|++++++++
T Consensus 21 ~~~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~~~~ 99 (480)
T 3t5a_A 21 MSVRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYVVAF 99 (480)
T ss_dssp ---CCHHHHHHHHHHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHHHHH
T ss_pred CCcccHHHHHHHHHHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHHHHH
Confidence 677899999999999999999999753 1 689999999999999999999996 9999999999999999999
Q ss_pred HHHHHhCcEEEecCC---CCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCccc--ccccccccchhhhhhhcccc
Q 014065 73 LAVIRARATAAPLNA---AYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISH--ATATLLDADSELTLSLAHSE 147 (431)
Q Consensus 73 lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 147 (431)
|||+++|++++|+++ .++.+++.++++.++++++|++....+............. ..+.. .... .
T Consensus 100 lA~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~ 169 (480)
T 3t5a_A 100 LGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGESPPSIIEV---------DLLD-L 169 (480)
T ss_dssp HHHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC------CCEEEEG---------GGSC-T
T ss_pred HHHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhccccccccceeEe---------cccc-c
Confidence 999999999999999 7789999999999999999999887665544322211100 00000 0000 0
Q ss_pred ccccccccCCCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCC------CCeEEEecChhhHHHHHHHH
Q 014065 148 SDTNAISKLTNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTE------SDSTVIVLPLFHVHGMLAGL 221 (431)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~------~~~~~~~~p~~~~~~~~~~~ 221 (431)
............++++++++|||||||.||+|.++|.++..++......+++.. ++++++.+|++|.+++...+
T Consensus 170 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 249 (480)
T 3t5a_A 170 DAPNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPNSALVSWLPFYHDMGLVIGI 249 (480)
T ss_dssp TCC---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHHCTTTTTCCCTTEEEEECCCTTSTTHHHHHT
T ss_pred ccccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHhccccccCCCCCCeEEEeCCCcCccHHHHHH
Confidence 111112234456789999999999999999999999999999988888888877 99999999999999988878
Q ss_pred HHHHhcCCEEEeCCCCC--CChhhHHHHHHHhcceeeecchHHHHHHHhccc---CCCCCCCCCccEEEeccCCCcHHHH
Q 014065 222 LSSFAAGAAVTLPAAGR--FSASTFWQDMIKYNATWYTAVPTIHQIVLDRHV---AKPEPVYPKLRFIRSCSASLAPVIL 296 (431)
Q Consensus 222 ~~~l~~G~~~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~---~~~~~~~~~l~~i~~~g~~~~~~~~ 296 (431)
+.++..|+++++.+... +++..+++.++++++| +..+|+++..++.... .....+++++|.+++||+++++++.
T Consensus 250 ~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~~~~~~~l~~lr~i~~gG~~l~~~~~ 328 (480)
T 3t5a_A 250 CAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDDDMAGRDLGNILTILSGSERVQAATI 328 (480)
T ss_dssp HHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTGGGTTCCCTTCCEEEECCTTCCHHHH
T ss_pred HHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCcccccccchhhhheeeecCCcCCHHHH
Confidence 99999999999986211 3899999999999999 8899999888876421 1224568999999999999999999
Q ss_pred HHHHHHhC------CceecccCcccccCcccCCCCCCCC----------------------CCCCCCccccccceEEEEC
Q 014065 297 SRLEEAFG------APVLEAYAMTEATHLMSSNPLPEDG----------------------PHKPGSVGRPVGQEIAILD 348 (431)
Q Consensus 297 ~~~~~~~~------~~i~~~yg~tE~~~~~~~~~~~~~~----------------------~~~~~~~G~~~~~~~~i~d 348 (431)
+++.+.++ +.+++.||+||++.+++........ .....++|+|++++++|+|
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~p~~~~~~ivd 408 (480)
T 3t5a_A 329 KRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGGGATSLISYMLPRSPIVRIVD 408 (480)
T ss_dssp HHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSSSCEEEECEECCSSSEEEEEE
T ss_pred HHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeecCCCCcceeeecCcccCCEEEEEc
Confidence 99999983 3699999999999887765432110 2334589999889999999
Q ss_pred CC-CCcCCCCceeeEEEeCCccccccccCcchhhhccc------------CCceecCceEEEcCCCeEEEecc
Q 014065 349 EI-GVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL------------FGWFHTGDIGYFDSDGYLHLVGR 408 (431)
Q Consensus 349 ~~-~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------~g~~~TGD~~~~~~~g~l~~~gR 408 (431)
++ |++++.|+.|||+|+||+++.||+++++.+++.|. +|||+|||+|++| ||+|+|+||
T Consensus 409 ~~~g~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TGDlg~~d-dG~l~~~GR 480 (480)
T 3t5a_A 409 SDTCIECPDGTVGEIWVHGDNVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRTGDSGFVT-DGKMFIIGR 480 (480)
T ss_dssp TTTTEECCTTBCEEEEEESTTSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEEEEEEEE-TTEEEECC-
T ss_pred CCCCcCCCCCCEEEEEEeCCccccccccCcchhHHHHhhhhccccCCCCCCCeeeccceeeEE-CCEEEEeCC
Confidence 66 89999999999999999999999999999999883 4699999999997 999999998
No 31
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=3.2e-64 Score=535.14 Aligned_cols=407 Identities=24% Similarity=0.325 Sum_probs=343.1
Q ss_pred cccHHHHHHHHHHhcCCcceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEE
Q 014065 3 GVTLIGLLNQVIDQFSSKRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATA 82 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 82 (431)
..++.++|+++++++|+++|+++.+ +++||+||+++++++|++|++.|+++|++|+++++|++++++++|||+++|+++
T Consensus 463 ~~~l~~~~~~~~~~~p~~~Av~~~~-~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lailkaG~~~ 541 (1304)
T 2vsq_A 463 TKPLTYWFKEAVNANPDAPALTYSG-QTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILGVLKAGAAY 541 (1304)
T ss_dssp CCCHHHHHHHHHHHCTTSEEEESSS-CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHhCCCCeEEEECC-eeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHHHHHHHHHHHHCCEE
Confidence 3579999999999999999999755 799999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhcCCceEEEecCCchhHHHHHHHhcCcccccccccccchhhhhhhccccccccccccCCCCCCC
Q 014065 83 APLNAAYTPDEFEFYLSDSESKLLLTPAEGNAAAQAAASKLNISHATATLLDADSELTLSLAHSESDTNAISKLTNDPSD 162 (431)
Q Consensus 83 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (431)
+|++|.++.+++.++++++++++++++.+....... .......+.+.+. . ... ...........+++
T Consensus 542 vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~----~~~~~~~~~~~~~-~--~~~------~~~~~~~~~~~~~~ 608 (1304)
T 2vsq_A 542 LPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAE----LPYTGTTLFIDDQ-T--RFE------EQASDPATAIDPND 608 (1304)
T ss_dssp EECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTT----CCCCSEEEESSCG-G--GGG------SCSSCCCCCCCTTS
T ss_pred EEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhc----cCCCCcEEEeccc-c--ccc------cccCCCCCCCCCCC
Confidence 999999999999999999999999998764332110 1111111111110 0 000 01111223456789
Q ss_pred eEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCC-CCCh
Q 014065 163 VALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAG-RFSA 241 (431)
Q Consensus 163 ~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~ 241 (431)
+++++|||||||.||||+++|.++.+. ......+++.++++++...|++|..+.+. ++.++..|+++++.+.. .+++
T Consensus 609 ~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~~~~~d~~l~~~~~~fd~~~~~-~~~~l~~G~~l~~~~~~~~~~~ 686 (1304)
T 2vsq_A 609 PAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMAFSDQDTFLSVSNYAFDAFTFD-FYASMLNAARLIIADEHTLLDT 686 (1304)
T ss_dssp EEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSCCCTTCEEEECSCTTSTHHHHH-HHHHHTTTCEEEECCGGGTTCH
T ss_pred eEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcCCCCCCEEEEECCccHHHHHHH-HHHHHHcCCEEEECChhhcCCH
Confidence 999999999999999999999999865 44455678889999999999999888766 89999999999998742 3589
Q ss_pred hhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhC-CceecccCcccccCcc
Q 014065 242 STFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFG-APVLEAYAMTEATHLM 320 (431)
Q Consensus 242 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~-~~i~~~yg~tE~~~~~ 320 (431)
..+.+.|.++++|+++++|++++.+.+... ..++++|.+++|||+++++..+.+.+.++ ++++|.||+||++.++
T Consensus 687 ~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~----~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 762 (1304)
T 2vsq_A 687 ERLTDLILQENVNVMFATTALFNLLTDAGE----DWMKGLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFA 762 (1304)
T ss_dssp HHHHHHHHHHTCCEEEEEHHHHHHHHHHCS----HHHHTCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCS
T ss_pred HHHHHHHHHcCCcEEEccHHHHHHHHhhch----hcCCCccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHh
Confidence 999999999999999999999999976532 22578999999999999999999998884 7899999999999877
Q ss_pred cCCCCCC-CCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhccc-------CCceec
Q 014065 321 SSNPLPE-DGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFL-------FGWFHT 391 (431)
Q Consensus 321 ~~~~~~~-~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------~g~~~T 391 (431)
+...... .......++|+|+ |++++|+|+++++++.|+.|||+|+|+++++||+++++.+++.|. ++||+|
T Consensus 763 ~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~p~~~g~~~yrT 842 (1304)
T 2vsq_A 763 TAHVVHDLPDSISSLPIGKPISNASVYILNEQSQLQPFGAVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRT 842 (1304)
T ss_dssp EEEECCCCCSSCSSCCCBEECTTEEEEEECTTSCBCCTTCCEEEEEEETTCCCCBTTCHHHHHHHEEECTTSTTCEEEEE
T ss_pred eeeeccCccccCCCCCCceeeCCCEEEEECCCcCCCCCCCceEEEEeccccCccccCCcccchhhhccCCCCCCCeeEec
Confidence 6554321 1233456899999 899999999999999999999999999999999999999999884 249999
Q ss_pred CceEEEcCCCeEEEecccccceecCCeeccccceeccc
Q 014065 392 GDIGYFDSDGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 392 GD~~~~~~~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
||+|++++||.++|+||.||+||++|++|+|.|||.+.
T Consensus 843 GDl~~~~~dG~l~~~GR~d~qvki~G~rie~~eIE~~l 880 (1304)
T 2vsq_A 843 GDLARWLPDGTIEYAGRIDDQVKIRGHRIELEEIEKQL 880 (1304)
T ss_dssp EEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHHHH
T ss_pred CCeEEEcCCCeEEEEcCCCCEEEECCEeeCHHHHHHHH
Confidence 99999999999999999999999999999999999863
No 32
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=100.00 E-value=2e-42 Score=328.73 Aligned_cols=252 Identities=14% Similarity=0.107 Sum_probs=213.7
Q ss_pred CCC-CCeEEEEeccCCCCCCCeeeechHHHHHHHHHHH---HHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEe
Q 014065 158 NDP-SDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIK---SVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTL 233 (431)
Q Consensus 158 ~~~-~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 233 (431)
..+ +++++++|||||||.||+|.++|.++...+..+. ...++.++++++..+|+.|..+.+..++.++..|+++++
T Consensus 82 ~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 161 (436)
T 3qov_A 82 GDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVP 161 (436)
T ss_dssp SCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEEC
T ss_pred CCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEe
Confidence 345 8899999999999999999999999977666553 345889999999999998777777668889999999998
Q ss_pred CCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCC-CCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccC
Q 014065 234 PAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKP-EPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYA 312 (431)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~-~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg 312 (431)
.+ .+++..+++.|+++++|+++++|+++..+++...... ...++++|.+++||+++++++.+.+.+.||+++++.||
T Consensus 162 ~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG 239 (436)
T 3qov_A 162 AA--AGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAEPHTDEQRRKIERMLNVKAYNSFG 239 (436)
T ss_dssp CC--SCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEE
T ss_pred CC--CCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcccCCccEEEEeCCcCCHHHHHHHHHHhCccEEecCc
Confidence 77 5689999999999999999999999999988754432 22378999999999999999999999999999999999
Q ss_pred cccccCc-ccCCCCCCCCCCCCCCccccc-cceEEEEC-CCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCce
Q 014065 313 MTEATHL-MSSNPLPEDGPHKPGSVGRPV-GQEIAILD-EIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWF 389 (431)
Q Consensus 313 ~tE~~~~-~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~ 389 (431)
+||+++. +..... ....++.|. +..++|+| ++|++++.|+.|||+++|. +...+.++||
T Consensus 240 ~TE~~~~~~~~~~~------~~~g~~~~~~~~~v~i~d~~~g~~~~~g~~Gel~v~~~------------~~~~~~~~~y 301 (436)
T 3qov_A 240 MTEMNGPGVAFECQ------EQNGMHFWEDCYLVEIIDPETGEPVPEGEIGELVLTTL------------DREMMPLIRY 301 (436)
T ss_dssp EGGGTEEEEEEECT------TCSSEEECTTTEEEEEECTTTCSBCSTTCCEEEEEEES------------SCCSSCCCSE
T ss_pred chhhcCCeeEEecC------CCCeeEEccCceEEEEEECCCCCCCCCCCceEEEEecc------------CcCCceEEEE
Confidence 9999544 333221 112356666 78999999 7799999999999999983 3344567899
Q ss_pred ecCceEEEcCCC------e---EEEecccccceecCCeeccccceeccc
Q 014065 390 HTGDIGYFDSDG------Y---LHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 390 ~TGD~~~~~~~g------~---l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|||+|+++++| + +++.||.||+||++|++|+|.|||.+.
T Consensus 302 ~TGDl~~~~~~gc~cG~~~~~il~i~GR~dd~ik~~G~~v~p~eiE~~l 350 (436)
T 3qov_A 302 RTRDLTRILPGKCPCGRTHLRIDRIKGRSDDMFIIKGVNIFPMQVEKIL 350 (436)
T ss_dssp EEEEEECEECSCCTTCCCSCEECCCCCBSSSCEEETTEEECHHHHHHHH
T ss_pred EcCCEEEEcCCCCCCCCCccccCcccCccCCEEEECCEEECHHHHHHHH
Confidence 999999999998 5 699999999999999999999999864
No 33
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=100.00 E-value=3e-42 Score=317.37 Aligned_cols=231 Identities=19% Similarity=0.248 Sum_probs=197.8
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRF 239 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~ 239 (431)
.+++++|+|||||||.||+|.++|+++.+++......+++.++|++++.+|++|.+|+.. ++.++..|+++++.+. ..
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~-~~~~l~~g~~~~~~~~-~~ 113 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALSLGPGTRALVCLNVGYIAGLMM-LVRGMELDWELTVTEP-TA 113 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHH-HHHHHHHTCEEEEECC-CS
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEECChHHHHHHHH-HHHHHHhCcEEEecCc-cc
Confidence 478899999999999999999999999999999999999999999999999999999887 7888999999988763 22
Q ss_pred ChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccCcccccCc
Q 014065 240 SASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYAMTEATHL 319 (431)
Q Consensus 240 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg~tE~~~~ 319 (431)
..++.++++++|++.++|++++.+++.... ..+++++|.+++||+++++++.+++.+ +++++++.||+||++..
T Consensus 114 ---~~~~~i~~~~~t~~~~~P~~l~~ll~~~~~--~~~l~~lr~v~~gG~~l~~~~~~~~~~-~~~~~~~~YG~TEt~~~ 187 (358)
T 4gs5_A 114 ---NPLAGLDHADFDFVAMVPMQLQSILENSAT--SGQVDRLGKVLLGGAPVNHALAMQISD-LAMPVYQSYGMTETVSH 187 (358)
T ss_dssp ---CTTTTCSSCCCSEEEECHHHHHHHHHCTTT--GGGGGGGCSEEECSSCCCHHHHHHHHT-CSSCEEEEEECGGGSSE
T ss_pred ---cHHHHHHHhCCeEEEcChHHHHHhhccccc--cccCCcceEEEEcccCCCchheecccc-cCceEEeccccccccce
Confidence 335678999999999999999999887543 335789999999999999999999886 58999999999999987
Q ss_pred ccCCCCCCCCCCCCCCccccc-cceEEEECCCCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEc
Q 014065 320 MSSNPLPEDGPHKPGSVGRPV-GQEIAILDEIGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFD 398 (431)
Q Consensus 320 ~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~ 398 (431)
+...+. .....+.+|.+. ++++.+.+ .|||+++|+.. .+|||+|||+|++|
T Consensus 188 ~~~~~~---~~~~~g~~~~~~pgv~~~~~~----------~Gel~~~g~~~---------------~~g~~~TGDlg~~d 239 (358)
T 4gs5_A 188 VALKAL---NGPEASELYVFLPGIQYGVDE----------RGCLHISGAVT---------------NGQTVQTNDLVEIH 239 (358)
T ss_dssp EEEEEC---SSTTCCSCEEECTTCEEEECT----------TSEEEEESGGG---------------TTCCEEEEEEEEEC
T ss_pred eecccc---cccccceeeccCCCeEEEecC----------cCceEEecccc---------------cCcceecCCccccc
Confidence 776654 233456788887 67776644 39999988532 25899999999999
Q ss_pred CCCeEEEecccccceecCCeeccccceec
Q 014065 399 SDGYLHLVGRIKELINRGGNLHESISLFL 427 (431)
Q Consensus 399 ~~g~l~~~gR~~d~i~~~G~~i~~~~iE~ 427 (431)
+|| ++++||.||+||++|++|+|.|||.
T Consensus 240 ~~g-~~~~GR~dd~Ik~~G~~v~p~eIE~ 267 (358)
T 4gs5_A 240 GNA-FQWIGRADNVINSGGVKIVLDQIDQ 267 (358)
T ss_dssp SSE-EEEEEEGGGEEEETTEEEEHHHHHH
T ss_pred cCc-eEEcccccCeEEECCEEECHHHHHH
Confidence 999 5567999999999999999999995
No 34
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=100.00 E-value=5e-41 Score=319.72 Aligned_cols=253 Identities=15% Similarity=0.108 Sum_probs=208.2
Q ss_pred CCCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHH---HHhcCCCCCeEEEecCh-hhHHHHHHHHHHHHhcCCEEE
Q 014065 157 TNDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIK---SVYKLTESDSTVIVLPL-FHVHGMLAGLLSSFAAGAAVT 232 (431)
Q Consensus 157 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~l~~G~~~~ 232 (431)
...++++++++|||||||.||+|.++|.++........ ..+++.++++++..+|+ +|..++.. .+.++..|++++
T Consensus 88 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~-~~~~~~~G~~~~ 166 (443)
T 2y4o_A 88 AVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGI-HYGAERLGCMVV 166 (443)
T ss_dssp SSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHH-HHHHHHHTCEEE
T ss_pred CCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHH-HHHHHHcCCEEE
Confidence 34568899999999999999999999999877655433 36788999999999998 45555544 788899999999
Q ss_pred eCCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCC-CCCCCccEEEeccCCCcHHHHHHHHHHhCCceeccc
Q 014065 233 LPAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPE-PVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAY 311 (431)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~-~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~y 311 (431)
+.+ .+++..+++.|+++++|++.++|+++..+++....... ..++++|.+++||+++++++.+.+++.+|+++++.|
T Consensus 167 ~~~--~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~Y 244 (443)
T 2y4o_A 167 PMS--GGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDPAESSLKIGIFGAEPWTQALRNEVETRVGIDALDIY 244 (443)
T ss_dssp CCC--SCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred ECC--CCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCcccCCceEEEECCCcCCHHHHHHHHHHhCcCEEecc
Confidence 877 56999999999999999999999999999886543221 125799999999999999999999999999999999
Q ss_pred CcccccCc-ccCCCCCCCCCCCCCCccccc-cceEEEECC-CCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCc
Q 014065 312 AMTEATHL-MSSNPLPEDGPHKPGSVGRPV-GQEIAILDE-IGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGW 388 (431)
Q Consensus 312 g~tE~~~~-~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~-~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~ 388 (431)
|+||+++. +..... . ....++.|. +..++|+|+ +|++++.|+.|||++++. +++.|.++|
T Consensus 245 G~TE~~g~~~~~~~~-~----~~~g~~~~~~~~~~~i~d~~~g~~~~~G~~Gel~v~~~------------t~~~~p~~~ 307 (443)
T 2y4o_A 245 GLSEVMGPGVACECV-E----TKDGPVIWEDHFYPEIIDPVTGEVLPDGSQGELVFTSL------------TKEAMPVIR 307 (443)
T ss_dssp EETTTTEEEEEEECT-T----TCCSEEECTTTEEEEEECTTTCCBCCTTCCEEEEEEES------------SCSSSCCSS
T ss_pred CchhhcCCeEEeccC-C----CCCceEEccCCeEEEEEcCCCCCCCCCCCceEEEEeCC------------CcccChhhe
Confidence 99997432 332221 1 111244455 689999994 599999999999999972 334456789
Q ss_pred eecCceEEEcCC-CeE-----EEecccccceecCCeeccccceeccc
Q 014065 389 FHTGDIGYFDSD-GYL-----HLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 389 ~~TGD~~~~~~~-g~l-----~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
|+|||+|+++++ |++ ++.||.||+||++|++|+|.|||.+.
T Consensus 308 y~TGDl~~~~~~cG~~~~~l~~i~GR~~d~i~~~G~~v~p~eiE~~l 354 (443)
T 2y4o_A 308 YRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIV 354 (443)
T ss_dssp EEEEEEECEECCSSSSSCEECCCCEESSCCEEETTEEECHHHHHHHH
T ss_pred eecCCEEEEcCCCCCCccccCccccccCCeEEECCEEECHHHHHHHH
Confidence 999999999999 986 89999999999999999999999863
No 35
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=100.00 E-value=2.6e-40 Score=314.22 Aligned_cols=252 Identities=15% Similarity=0.114 Sum_probs=208.4
Q ss_pred CCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHH---HHhcCCCCCeEEEecCh-hhHHHHHHHHHHHHhcCCEEEe
Q 014065 158 NDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIK---SVYKLTESDSTVIVLPL-FHVHGMLAGLLSSFAAGAAVTL 233 (431)
Q Consensus 158 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~l~~G~~~~~ 233 (431)
..++++++++|||||||.||+|.++|.++........ ..+++.++++++..+|+ +|..++.. .+.++..|+++++
T Consensus 87 ~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~G~~~~~ 165 (437)
T 2y27_A 87 VPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGA-HYGAERAGLTVIP 165 (437)
T ss_dssp SCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHH-HHHHHHTTCEEEC
T ss_pred CChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHH-HHHHHHcCCEEEe
Confidence 4568899999999999999999999999877655433 35788999999999998 56666654 7889999999998
Q ss_pred CCCCCCChhhHHHHHHHhcceeeecchHHHHHHHhcccCCCC-CCCCCccEEEeccCCCcHHHHHHHHHHhCCceecccC
Q 014065 234 PAAGRFSASTFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPE-PVYPKLRFIRSCSASLAPVILSRLEEAFGAPVLEAYA 312 (431)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~-~~~~~l~~i~~~g~~~~~~~~~~~~~~~~~~i~~~yg 312 (431)
.+ .+++..+++.|+++++|+++++|+++..+++....... ..++++|.+++||+++++++.+.+++.+|+++++.||
T Consensus 166 ~~--~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG 243 (437)
T 2y27_A 166 FG--GGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYG 243 (437)
T ss_dssp CC--SCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEE
T ss_pred CC--CCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCCeeEEEEcCccCCHHHHHHHHHHHCcCEEecCC
Confidence 76 56999999999999999999999999999887543221 1257999999999999999999999999999999999
Q ss_pred ccccc-CcccCCCCCCCCCCCCCCccccc-cceEEEECC-CCCcCCCCceeeEEEeCCccccccccCcchhhhcccCCce
Q 014065 313 MTEAT-HLMSSNPLPEDGPHKPGSVGRPV-GQEIAILDE-IGVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWF 389 (431)
Q Consensus 313 ~tE~~-~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~-~~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~ 389 (431)
+||++ ..+...... ....++.|. ++.++|+|+ +|++++.|+.|||+++|. +++.|.++||
T Consensus 244 ~TE~~g~~~~~~~~~-----~~~g~~~~~~~~~~~i~d~~~g~~~~~g~~Gel~v~~~------------t~~~~~~~~y 306 (437)
T 2y27_A 244 LSEVMGPGVASECVE-----TKDGPTIWEDHFYPEIIDPETGEVLPDGELGELVFTSL------------TKEALPIIRY 306 (437)
T ss_dssp ETTTTEEEEEECCTT-----TCSSCEECTTTEEEEEECTTTCCBCCTTCCEEEEEEES------------SCSSSCCCSE
T ss_pred chhhcCCeeEEecCC-----CCCceeEccCceEEEEEcCCCCCCCCCCCccEEEEecC------------CcCCchhhee
Confidence 99984 323332211 111245555 689999995 599999999999999972 3344567899
Q ss_pred ecCceEEEcC-CCeE-----EEecccccceecCCeeccccceeccc
Q 014065 390 HTGDIGYFDS-DGYL-----HLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 390 ~TGD~~~~~~-~g~l-----~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
+|||+|++++ +|++ ++.||.||+||++|++|+|.|||.+.
T Consensus 307 ~TGDl~~~~~~~G~~~~~i~~i~GR~~d~i~~~G~~v~p~eiE~~l 352 (437)
T 2y27_A 307 RTRDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVNVFPTQIEEQL 352 (437)
T ss_dssp EEEEEECEECCSSSSSCEECCCCEEGGGCEEETTEEECHHHHHHHH
T ss_pred ecCCEEEEeCCCCCCccccCccccccCCeEEECCeEECHHHHHHHH
Confidence 9999999999 6985 89999999999999999999999864
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.98 E-value=5.7e-32 Score=251.00 Aligned_cols=235 Identities=15% Similarity=0.118 Sum_probs=178.2
Q ss_pred CCCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHH---HHHhcCCCCCeEEEecCh-hhHHHHHHHHHHHHhcCCEEEe
Q 014065 158 NDPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNI---KSVYKLTESDSTVIVLPL-FHVHGMLAGLLSSFAAGAAVTL 233 (431)
Q Consensus 158 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~---~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~l~~G~~~~~ 233 (431)
..++++++++|||||||.||+|.++|.++....... ....++.+++++++.+|+ +|..++.. .+.++..|+ +++
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~-~~~~~~~G~-~v~ 165 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAIN-KERALRLGG-MFF 165 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHH-HHHHHHTTS-CEE
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHH-HHHHHHcCC-EEE
Confidence 467889999999999999999999999999887743 355678899999999999 99999877 556688898 566
Q ss_pred CCCCCCChh-----------------------hHHHHHHHhcceeeecchHHHHHHHhcccCCCCCCCCCccEEEeccCC
Q 014065 234 PAAGRFSAS-----------------------TFWQDMIKYNATWYTAVPTIHQIVLDRHVAKPEPVYPKLRFIRSCSAS 290 (431)
Q Consensus 234 ~~~~~~~~~-----------------------~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~l~~i~~~g~~ 290 (431)
+. .+++. .+++.++++++|++.++|+++..+++..... ..+++++|.+++||++
T Consensus 166 ~~--~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~-~~~~~~lr~i~~gGe~ 242 (369)
T 3hgu_A 166 SI--DIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPEVV-LQMKQSLAQITLGGTE 242 (369)
T ss_dssp CC--CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCHHHH-HHHHHHCSEEEEESSC
T ss_pred Cc--cCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhhhhh-ccccCCeeEEEECCcc
Confidence 55 56776 7888999999999999999999998764321 1236789999999999
Q ss_pred CcHHHHHHHH-HHh-CCceecccCcccccCcccCCCCCCCCCCCCCCcccc------c-cceEEEECC-CCCcCCCCcee
Q 014065 291 LAPVILSRLE-EAF-GAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGRP------V-GQEIAILDE-IGVPQEGGAKG 360 (431)
Q Consensus 291 ~~~~~~~~~~-~~~-~~~i~~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~------~-~~~~~i~d~-~~~~~~~~~~G 360 (431)
+++++.+++. +.| ++++++.||+||+++++..++. .++|+| . +++++|+|+ +|++++.|+.|
T Consensus 243 l~~~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~~~--------~~~G~~~~~~~~~~~~~v~ivD~~~g~~vp~G~~G 314 (369)
T 3hgu_A 243 LNLDEIKFIASEILPDCEFSASYGSTSALGVSRSLLI--------TSESQQVIYDSFSPFITYDVVDSITAQTVEYGERG 314 (369)
T ss_dssp CCHHHHHHHHHHTCTTSEEEEEEEEGGGTEEEEECCB--------CTTCSSCEEECCTTTEEEEEECTTTCSBCCTTCEE
T ss_pred CCHHHHHHHHHHhCCCcEEEcccCchhhhcceecccc--------ccCCCcccccCCCCCeEEEEECCCCCcCCCCCCce
Confidence 9999999999 899 8999999999999876543321 147888 7 799999997 89999999999
Q ss_pred eEEEeCCccccccccCcchhhhcccCCceecCceEEEcCC--C-------eEEEecccccceecCCe
Q 014065 361 EVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSD--G-------YLHLVGRIKELINRGGN 418 (431)
Q Consensus 361 el~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~--g-------~l~~~gR~~d~i~~~G~ 418 (431)
||+|++... ..+ --.|+|||++...+. | .+..++|.++..++.|.
T Consensus 315 El~vt~l~~------------~~~-l~ry~tgD~~~~~~~~~g~~~d~~~~v~~~~~~~~~~~i~gv 368 (369)
T 3hgu_A 315 NVIVTHLSP------------WAF-YPRVAERDTAIRLPGVSGFAGDRLADIEPLKISEGRKVIEGV 368 (369)
T ss_dssp EEEEEEEET------------TEE-EEEEEEEEEEEEECCSTTCSSCEEEEEEECC-----------
T ss_pred EEEEEEcCc------------ccc-cccccCCceEEEecCCCCCcCcccccceeccccCCCceeeec
Confidence 999987321 111 124889999887542 2 35567777777777663
No 37
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=98.94 E-value=2.6e-09 Score=101.85 Aligned_cols=128 Identities=18% Similarity=0.237 Sum_probs=83.1
Q ss_pred CCC---ccEEEeccCCCcHHHHHHHHHHh-CCcee-cccCcccccCcccCCCCCCCCCCCCCCccccc--c-ceEEEECC
Q 014065 278 YPK---LRFIRSCSASLAPVILSRLEEAF-GAPVL-EAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV--G-QEIAILDE 349 (431)
Q Consensus 278 ~~~---l~~i~~~g~~~~~~~~~~~~~~~-~~~i~-~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~--~-~~~~i~d~ 349 (431)
.|+ +..+..||-.. -...++..+ +.+++ ..|++||+-..+-..+. ..++..+..+ + .-.+.++.
T Consensus 296 WPnl~~l~~~~~G~~~~---Y~~~l~~~~g~~p~~~~~Y~ASEg~~gi~~~p~-----~~~~~~~~~L~~~~~ffEFip~ 367 (581)
T 4eql_A 296 WPNTKYIETVVTGSMGQ---YVPMLNYYCNDLPLVSTTYGSSETTFGINLDPL-----CKPEDVSYTFMPNMSYFEFIPM 367 (581)
T ss_dssp STTCCEEEEECSGGGGG---GHHHHHHHHTTCCEECCEEECSSCEEEECSCTT-----SCGGGCCEEECTTSSEEEEEEC
T ss_pred CCCCcEEEEEcCCChHH---HHHHHHHHcCCCccccCccccccceeeeccCCC-----CCcccCceeecCCcEEEEEEec
Confidence 577 44455566322 233444444 67777 89999995322212111 1112233332 2 33444431
Q ss_pred C----C-----CcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcC----CCeEEEecccccceecC
Q 014065 350 I----G-----VPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDS----DGYLHLVGRIKELINRG 416 (431)
Q Consensus 350 ~----~-----~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~----~g~l~~~gR~~d~i~~~ 416 (431)
+ . ..++.|+.+||++++. .|.|. |++||+++++. ...+.|.||.++++++.
T Consensus 368 ~~~~~~~~v~l~eVe~G~~YelViTt~---~GL~R-------------Yr~GD~v~v~~f~~~~p~i~f~gR~~~~l~~~ 431 (581)
T 4eql_A 368 DGGDKNDVVDLEDVKLGCTYEPVVTNF---AGLYR-------------MRVGDIVLVTGFYNNAPQFKFVRRENVVLSID 431 (581)
T ss_dssp STTCCSSCEEGGGCCTTCEEEEEEECS---SSCCS-------------EECCEEEEEEEEETTEEEEEEEEETTEEECSS
T ss_pred cccCCCcEeCHHHcCCCceEEEEEeec---cceee-------------EEcCCEEEEcccCCCCcEEEEEEecCCEEEee
Confidence 1 1 3467899999999985 35554 99999999975 45799999999999999
Q ss_pred Ceeccccceeccc
Q 014065 417 GNLHESISLFLAK 429 (431)
Q Consensus 417 G~~i~~~~iE~a~ 429 (431)
|+++++.+||.|-
T Consensus 432 Gekl~~~~v~~al 444 (581)
T 4eql_A 432 SDKTNEEDLFKAV 444 (581)
T ss_dssp SCCEEHHHHHHHH
T ss_pred eeECCHHHHHHHH
Confidence 9999999999873
No 38
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=98.92 E-value=2.4e-09 Score=102.23 Aligned_cols=147 Identities=20% Similarity=0.278 Sum_probs=91.3
Q ss_pred chHHHHHHHhcccCCC-----CCCCCCcc---EEEeccCCCcHHHHHHHHHHh-CCcee-cccCcccccCcccCCCCCCC
Q 014065 259 VPTIHQIVLDRHVAKP-----EPVYPKLR---FIRSCSASLAPVILSRLEEAF-GAPVL-EAYAMTEATHLMSSNPLPED 328 (431)
Q Consensus 259 ~p~~~~~l~~~~~~~~-----~~~~~~l~---~i~~~g~~~~~~~~~~~~~~~-~~~i~-~~yg~tE~~~~~~~~~~~~~ 328 (431)
.|..++.+.+...+.. ....|+++ .+..||- ..-...++..+ +.+++ ..|++||+-......+.
T Consensus 277 ~~~la~~l~~~~~~~~~~g~i~~lWPnlk~l~~~~tG~~---~~Y~~~l~~~~g~~p~~~~~Y~ASEg~~gi~~~p~--- 350 (609)
T 4b2g_A 277 DPELADLVAGECSKDNWEGIITRIWPNTKYLDVIVTGAM---AQYIPTLDYYSGGLPLACTMYASSECYFGLNLNPM--- 350 (609)
T ss_dssp CHHHHHHHHHHHTSSCCTTTHHHHSTTCCEEEEECSGGG---GGGHHHHHHHHTSCCEECCEEECSSCEEEECSCTT---
T ss_pred CHHHHHHHHHHhCCCccccCHHHhCCCCcEEEEEccCCh---HHHHHHHHHHcCCCccccCcccccceeeeeecCCC---
Confidence 3455666655443321 12367755 4455553 22224444444 67777 89999996433222111
Q ss_pred CCCCCCCccccc--c-ceEEEEC--CC--------------CCcCCCCceeeEEEeCCccccccccCcchhhhcccCCce
Q 014065 329 GPHKPGSVGRPV--G-QEIAILD--EI--------------GVPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWF 389 (431)
Q Consensus 329 ~~~~~~~~G~~~--~-~~~~i~d--~~--------------~~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~ 389 (431)
..++..+..+ + .-.+.++ +. -..++.|+.+||+++.. .|.|. |
T Consensus 351 --~~p~~~~~~L~p~~~ffEFIP~~~~~~~~~~~~~~~~v~l~eVe~G~~YelViTt~---~GL~R-------------Y 412 (609)
T 4b2g_A 351 --SKPSEVSYTIMPNMAYFEFLPHEHSSIPLSRDSPPRLVDLAHVEVGKEYELVITTY---AGLYR-------------Y 412 (609)
T ss_dssp --SCGGGCCEEECTTSCEEEEEEGGGTTSCCCSSSCCCCEEGGGCCTTCEEEEEEECT---TSCCS-------------E
T ss_pred --CCcccCceeecCCcEEEEEEeccccccccccCCCCccccHhHcCCCCeEEEehhhh---hhhhh-------------e
Confidence 1112223322 1 3334442 21 13578899999999874 46665 9
Q ss_pred ecCceEEEcC----CCeEEEecccccceecCCeeccccceeccc
Q 014065 390 HTGDIGYFDS----DGYLHLVGRIKELINRGGNLHESISLFLAK 429 (431)
Q Consensus 390 ~TGD~~~~~~----~g~l~~~gR~~d~i~~~G~~i~~~~iE~a~ 429 (431)
++||+++++. ...+.|+||.++++++.|+++++.+||.|-
T Consensus 413 r~GD~v~v~~f~~~~p~i~~~gR~~~~l~~~Geki~~~~v~~av 456 (609)
T 4b2g_A 413 RVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAV 456 (609)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHHHHHHH
T ss_pred ecCCEEEEeecCCCCcEEEEEEecCCeEEccccCCCHHHHHHHH
Confidence 9999999973 468999999999999999999999999873
No 39
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=98.86 E-value=1.5e-09 Score=103.19 Aligned_cols=129 Identities=17% Similarity=0.223 Sum_probs=81.8
Q ss_pred CCCccEE--EeccCCCcHHHHHHHHHHh-CCcee-cccCcccccCcccCCCCCCCCCCCCCCccccc--c-ceEEEEC--
Q 014065 278 YPKLRFI--RSCSASLAPVILSRLEEAF-GAPVL-EAYAMTEATHLMSSNPLPEDGPHKPGSVGRPV--G-QEIAILD-- 348 (431)
Q Consensus 278 ~~~l~~i--~~~g~~~~~~~~~~~~~~~-~~~i~-~~yg~tE~~~~~~~~~~~~~~~~~~~~~G~~~--~-~~~~i~d-- 348 (431)
.|+++.| +.+|.. ..-...++..+ +.++. ..|++||+-..+-..+ ...++..+..+ + .-.+.+.
T Consensus 301 WPnl~~i~~~~~G~~--~~Y~~~l~~~~g~~p~~~~~Y~ASEg~~gi~~~p-----~~~~~~~~~~L~p~~~ffEFiP~~ 373 (581)
T 4epl_A 301 FPNAKYVYGIMTGSM--EPYVPKLRHYAGDLPLVSHDYGSSEGWIAANVTP-----RLSPEEATFAVIPNLGYFEFLPVS 373 (581)
T ss_dssp CTTCCCEEEECSGGG--GGGHHHHHHHHTTSCEEECCEEETTEEEEECCCT-----TSCTTTCCEEECTTSCEEEEEEC-
T ss_pred CCCCceEEEEeCCCh--HHHHHHHHHHcCCCccccCceeccceeeeeecCC-----CCCccccceeecCCcEEEEEEecc
Confidence 6778633 334422 22224444444 67777 8999999643322221 11222233322 1 2233332
Q ss_pred CCC---------CcCCCCceeeEEEeCCccccccccCcchhhhcccCCceecCceEEEcCC----CeEEEecccccceec
Q 014065 349 EIG---------VPQEGGAKGEVCIRGPNVTKGYKNNPEANKSAFLFGWFHTGDIGYFDSD----GYLHLVGRIKELINR 415 (431)
Q Consensus 349 ~~~---------~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~----g~l~~~gR~~d~i~~ 415 (431)
+.+ ..++.|+.+||++++.+ |.|. |++||+++++.- ..+.|.||.++++++
T Consensus 374 ~~~~~~~~~v~l~eve~G~~YelviTt~~---GL~R-------------Yr~GD~v~v~g~~~~~p~~~~~gR~~~~l~~ 437 (581)
T 4epl_A 374 ETGEGEEKPVGLTQVKIGEEYEVVITNYA---GLYR-------------YRLGDVVKVIGFYNNTPQLKFICRRNLILSI 437 (581)
T ss_dssp ------CCCEEGGGCCTTCEEEEEEESTT---SCSS-------------EEEEEEEEEEEEETTEEEEEEEEETTCCBCS
T ss_pred cccCCCCceeeHHHcCCCCeEEEEEeecc---ceee-------------EEcCCEEEEecccCCCcEEEEEeecCCeEEe
Confidence 211 35788999999999853 5554 999999999642 479999999999999
Q ss_pred CCeeccccceeccc
Q 014065 416 GGNLHESISLFLAK 429 (431)
Q Consensus 416 ~G~~i~~~~iE~a~ 429 (431)
.|+++++.+||.|-
T Consensus 438 ~Ge~~~~~~v~~al 451 (581)
T 4epl_A 438 NIDKNTERDLQLSV 451 (581)
T ss_dssp SSCCBCHHHHHHHH
T ss_pred eeeECCHHHHHHHH
Confidence 99999999999873
No 40
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=93.57 E-value=0.59 Score=43.40 Aligned_cols=90 Identities=16% Similarity=0.161 Sum_probs=72.6
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--cHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPN--TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
.-+|.+.+...+..+++.+...|+.++|++...++. ....+...++++..|+..+++++. +.+.+...+++.++.++
T Consensus 108 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~i~~~~~t~l 186 (437)
T 2y27_A 108 VGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGGG-QTEKQVQLIQDFRPDII 186 (437)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECCCSC-CHHHHHHHHHHHCCSEE
T ss_pred EecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeCCCC-CHHHHHHHHHHhCCCEE
Confidence 457999999888888888888899999999999885 344555678889999999877654 78888999999999999
Q ss_pred EecCCchhHHHHH
Q 014065 107 LTPAEGNAAAQAA 119 (431)
Q Consensus 107 i~~~~~~~~~~~~ 119 (431)
+..+.....+...
T Consensus 187 ~~~Ps~~~~l~~~ 199 (437)
T 2y27_A 187 MVTPSYMLSIADE 199 (437)
T ss_dssp EECHHHHHHHHHH
T ss_pred EECHHHHHHHHHH
Confidence 9887766555443
No 41
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=93.34 E-value=0.66 Score=43.15 Aligned_cols=89 Identities=17% Similarity=0.150 Sum_probs=72.3
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--cHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPN--TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
..+|.+.+...+..+++.+...|+.++|++...++. ....+...++++..|+..+++++. +.+.+...+++.++.++
T Consensus 110 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~i~~~~~t~l 188 (443)
T 2y4o_A 110 VGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGG-QTEKQVQLIRDFEPKII 188 (443)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHCCSEE
T ss_pred EecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECCCC-CHHHHHHHHHHhCCcEE
Confidence 457999999888888888888899999999999886 344556678889999998887665 78888899999999999
Q ss_pred EecCCchhHHHH
Q 014065 107 LTPAEGNAAAQA 118 (431)
Q Consensus 107 i~~~~~~~~~~~ 118 (431)
+..+.....+..
T Consensus 189 ~~~Ps~~~~l~~ 200 (443)
T 2y4o_A 189 LVTPSYMLNLID 200 (443)
T ss_dssp EECHHHHHHHHH
T ss_pred EECHHHHHHHHH
Confidence 988776555444
No 42
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=93.25 E-value=0.62 Score=43.24 Aligned_cols=90 Identities=13% Similarity=0.030 Sum_probs=73.1
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--cHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPN--TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
..+|.+.+...+..+++.+...++.++|++...++- ....+...++++..|+..++.++. ..+.+...+++.++.++
T Consensus 104 v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~i~~~~~t~~ 182 (436)
T 3qov_A 104 IVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAAG-NSKRQIKFISDFKTTAL 182 (436)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHTCCEE
T ss_pred EEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCCC-CHHHHHHHHHHHCCCEE
Confidence 458999999988888888888899999999999874 455566778899999998887654 67888899999999999
Q ss_pred EecCCchhHHHHH
Q 014065 107 LTPAEGNAAAQAA 119 (431)
Q Consensus 107 i~~~~~~~~~~~~ 119 (431)
+..+.....+...
T Consensus 183 ~~~P~~~~~l~~~ 195 (436)
T 3qov_A 183 HAIPSYAIRLAEV 195 (436)
T ss_dssp ECCHHHHHHHHHH
T ss_pred EECHHHHHHHHHH
Confidence 9887765554443
No 43
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=86.37 E-value=14 Score=34.68 Aligned_cols=85 Identities=18% Similarity=0.073 Sum_probs=67.1
Q ss_pred eeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+... .++.+++++...++-+. .+...+++++..|+..+..+. ....+.+...+++.++..
T Consensus 30 ~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~Ga~~vpl~~-~~~~~~l~~~l~~~~~~~ 106 (509)
T 3ivr_A 30 VRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCS--EMIELIGAVALIGAILLPVNY-RLNADEIAFVLGDGAPSV 106 (509)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCH--HHHHHHHHHHHTTCEEEECCT-TSCHHHHHHHHHHHCEEE
T ss_pred cEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHhCCEEEecCC-CCCHHHHHHHHHhcCceE
Confidence 468999988776665544 47889999999988643 345558899999999987764 678889999999999999
Q ss_pred eecchHHHHHH
Q 014065 256 YTAVPTIHQIV 266 (431)
Q Consensus 256 ~~~~p~~~~~l 266 (431)
++..+.....+
T Consensus 107 vi~~~~~~~~~ 117 (509)
T 3ivr_A 107 VVAGTDYRDIV 117 (509)
T ss_dssp EEECSTTHHHH
T ss_pred EEECcchhhhH
Confidence 99988776653
No 44
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=84.71 E-value=8.1 Score=36.31 Aligned_cols=96 Identities=6% Similarity=-0.021 Sum_probs=71.1
Q ss_pred cCCcceEEecC-C-------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc-HHHHHHHHHHHHhCcEEEecCC
Q 014065 17 FSSKRALSVSG-K-------FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNT-VEFVIMFLAVIRARATAAPLNA 87 (431)
Q Consensus 17 ~p~~~a~~~~~-~-------~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~ 87 (431)
.++.+|++... | ..+|.+.+...+..+... .++.++|++...+|-. .-.+..+++++..|+..+..+
T Consensus 161 ~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 236 (501)
T 3ipl_A 161 NLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKES---LGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVD- 236 (501)
T ss_dssp CTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHH---TCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-
T ss_pred CCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHh---hCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeCC-
Confidence 35677776532 1 458999888777665544 4889999999988874 334445788889999988775
Q ss_pred CCCHHHHHHHHhcCCceEEEecCCchhHH
Q 014065 88 AYTPDEFEFYLSDSESKLLLTPAEGNAAA 116 (431)
Q Consensus 88 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 116 (431)
..+.+.+...+++.++.++...+.....+
T Consensus 237 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 265 (501)
T 3ipl_A 237 KFNAEQILTMIKNERITHISLVPQTLNWL 265 (501)
T ss_dssp SCCHHHHHHHHHHSCCCEEEECHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCcEEEchHHHHHHH
Confidence 46788999999999999999877654443
No 45
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=84.61 E-value=6.7 Score=37.46 Aligned_cols=88 Identities=15% Similarity=0.107 Sum_probs=69.0
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.++|++...++-+. .+...+++++..|+..+..+. .....++...++..+++.
T Consensus 49 ~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~Gav~vpl~~-~~~~~~l~~~l~~~~~~~ 125 (550)
T 3rix_A 49 VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSL--QFFMPVLGALFIGVAVAPAND-IYNERELLNSMNISQPTV 125 (550)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCT--TTHHHHHHHHHHTCEEEECCT-TCCHHHHHHHHHHHCCSE
T ss_pred cEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcc--cHHHHHHHHHHcCCEEeecCC-cCCHHHHHHHHHhcCCeE
Confidence 36899988776665544 448999999999988543 345558889999999987654 678899999999999999
Q ss_pred eecchHHHHHHHhc
Q 014065 256 YTAVPTIHQIVLDR 269 (431)
Q Consensus 256 ~~~~p~~~~~l~~~ 269 (431)
++..+.....+...
T Consensus 126 vi~~~~~~~~~~~~ 139 (550)
T 3rix_A 126 VFVSKKGLQKILNV 139 (550)
T ss_dssp EEECGGGHHHHHHH
T ss_pred EEEcHHHHHHHHHH
Confidence 99998877776544
No 46
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=84.58 E-value=24 Score=33.50 Aligned_cols=87 Identities=10% Similarity=0.006 Sum_probs=67.1
Q ss_pred eeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcce
Q 014065 178 GVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNAT 254 (431)
Q Consensus 178 ~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t 254 (431)
...+|...+...+..+.. ..++.++|++...++-+. .+...+++++..|+..+..+. .....++...+++.+++
T Consensus 45 ~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~Gav~vpl~~-~~~~~~l~~~l~~~~~~ 121 (541)
T 1v25_A 45 VHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHF--RHLEAYFAVPGMGAVLHTANP-RLSPKEIAYILNHAEDK 121 (541)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH--HHHHHHHHHHHTTCEEEECCT-TSCHHHHHHHHHHHTCS
T ss_pred CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEEecCc-ccCHHHHHHHHHhCCCc
Confidence 356899988776665544 457899999999988543 345558889999999987664 67888999999999999
Q ss_pred eeecchHHHHHHH
Q 014065 255 WYTAVPTIHQIVL 267 (431)
Q Consensus 255 ~~~~~p~~~~~l~ 267 (431)
.++..+.....+.
T Consensus 122 ~vi~~~~~~~~~~ 134 (541)
T 1v25_A 122 VLLFDPNLLPLVE 134 (541)
T ss_dssp EEEECGGGHHHHH
T ss_pred EEEEChhHHHHHH
Confidence 9999887665543
No 47
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=83.95 E-value=25 Score=33.65 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=73.3
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHH---h-cCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSV---Y-KLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~-~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 234 (431)
.++.++++.... .| ....+|...+...+..+... . ++.++|++...++-+. .++..+++++..|+..+..
T Consensus 56 ~p~~~al~~~~~--~g--~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~Ga~~vpl 129 (570)
T 3c5e_A 56 RPPSPALWWVNG--KG--KELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVP--EWWLVILGCIRAGLIFMPG 129 (570)
T ss_dssp SCCCEEEEEECS--SS--CEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCH--HHHHHHHHHHHHTCEEEEC
T ss_pred CCCceEEEEEcC--CC--ceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCeEEEec
Confidence 456667654321 11 23578999988776655543 3 7889999999888543 3455588899999998876
Q ss_pred CCCCCChhhHHHHHHHhcceeeecchHHHHHHH
Q 014065 235 AAGRFSASTFWQDMIKYNATWYTAVPTIHQIVL 267 (431)
Q Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 267 (431)
+. .+...++...+++.++..++..+.....+.
T Consensus 130 ~~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 161 (570)
T 3c5e_A 130 TI-QMKSTDILYRLQMSKAKAIVAGDEVIQEVD 161 (570)
T ss_dssp CT-TCCHHHHHHHHHHHTCSEEEEETTTHHHHH
T ss_pred CC-CCCHHHHHHHHHhcCCeEEEechHHHHHHH
Confidence 64 678889999999999999998877665543
No 48
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=83.67 E-value=12 Score=35.57 Aligned_cols=98 Identities=13% Similarity=0.120 Sum_probs=71.8
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
.++.++++... +| -.+|...+...+..+.. ..++.++|++...++-+. .++..+++++..|+..+..+
T Consensus 35 ~p~~~a~~~~~---~~----~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~la~~~~Gav~vpl~ 105 (536)
T 3ni2_A 35 HSSKPCLINGA---NG----DVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSP--EFVLAFLGASHRGAIITAAN 105 (536)
T ss_dssp STTSEEEEETT---TC----CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH--HHHHHHHHHHHHTCEEEECC
T ss_pred CCCceEEEECC---CC----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHHhCCEEeccC
Confidence 45666665322 22 35899988776665544 457899999999888643 34555889999999988766
Q ss_pred CCCCChhhHHHHHHHhcceeeecchHHHHHH
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPTIHQIV 266 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 266 (431)
. .....++...+++.++..++..+.....+
T Consensus 106 ~-~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 135 (536)
T 3ni2_A 106 P-FSTPAELAKHAKASRAKLLITQACYYEKV 135 (536)
T ss_dssp T-TCCHHHHHHHHHHHTEEEEEECGGGTHHH
T ss_pred C-CCCHHHHHHHHHhcCCEEEEEChHHHHHH
Confidence 4 67889999999999999999887655544
No 49
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=83.17 E-value=18 Score=34.35 Aligned_cols=104 Identities=6% Similarity=-0.010 Sum_probs=73.7
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
++.++++....+.. .-..-.+|...+...+..+.. ..++.++|++...++-+. .+...+++++..|+..+..+.
T Consensus 33 p~~~A~~~~~~~~~-~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~vpl~~ 109 (549)
T 3g7s_A 33 GEKTAIISAEPKFP-SEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSI--DYVMTIYALWRVAATPVPINP 109 (549)
T ss_dssp TTSEEEEEESSCCC-CSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH--HHHHHHHHHHHTTCEEEECCT
T ss_pred CCceEEEeCCCccc-ccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCCEEEccCC
Confidence 56666655432111 111246888888777665544 447899999999988643 345558899999999987764
Q ss_pred CCCChhhHHHHHHHhcceeeecchHHHHHHH
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVPTIHQIVL 267 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 267 (431)
......+...+++.+++.++..+.....+.
T Consensus 110 -~~~~~~l~~il~~~~~~~~i~~~~~~~~~~ 139 (549)
T 3g7s_A 110 -MYKSFELEHILNDSEATTLVVHSMLYENFK 139 (549)
T ss_dssp -TCCHHHHHHHHHHTTCSEEEEEGGGHHHHH
T ss_pred -CCCHHHHHHHHHhcCCCEEEEChHHHHHHH
Confidence 678889999999999999998877665543
No 50
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=81.95 E-value=3.5 Score=37.00 Aligned_cols=82 Identities=12% Similarity=0.056 Sum_probs=59.9
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC--cHHHHHHHHHHHHhCcEEEecCCCCCHH--------------
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPN--TVEFVIMFLAVIRARATAAPLNAAYTPD-------------- 92 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~-------------- 92 (431)
.-+|.+.+...+..+++.+...|+.++|++...+|- ..-.+...++++..|+.+++. ..+..
T Consensus 109 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~~--~~dp~~~~~~~~~~~~~~~ 186 (369)
T 3hgu_A 109 VVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSI--DIDPRWVKRSLSEGDTATV 186 (369)
T ss_dssp EEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEECC--CCCHHHHHHHHHTTCHHHH
T ss_pred EEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEECc--cCChHHHHHhhcccchhhh
Confidence 457899998888877777777899999999999886 334445556668899955543 33444
Q ss_pred ---------HHHHHHhcCCceEEEecCCc
Q 014065 93 ---------EFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 93 ---------~l~~~l~~~~~~~ii~~~~~ 112 (431)
.+...+++.++.+++..+..
T Consensus 187 ~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~ 215 (369)
T 3hgu_A 187 RKYTHHLVDQVQNTLMNQDIRFLVTTPPV 215 (369)
T ss_dssp HHHHHHHHHHHHHHHHHSCEEEEEECHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEeCHHH
Confidence 56668888899988876653
No 51
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=80.68 E-value=7.9 Score=34.58 Aligned_cols=96 Identities=5% Similarity=-0.002 Sum_probs=66.2
Q ss_pred HHhcCCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH-HHHHHHHHHHHhCcEEEe
Q 014065 14 IDQFSSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTV-EFVIMFLAVIRARATAAP 84 (431)
Q Consensus 14 a~~~p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~ 84 (431)
.+.+.|.+|++... +..+|++.+...+..++.. .+++++|++...+|-+. ..+..++..+..|+..+.
T Consensus 32 ~~w~~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~ 108 (358)
T 4gs5_A 32 EKWLGGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKA---LSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTV 108 (358)
T ss_dssp HHHHHTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEE
T ss_pred hccCCCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHH---hCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEe
Confidence 34467888887532 2568999988777666554 48899999999888753 344556667778888777
Q ss_pred cCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 85 LNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 85 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
.++... ....+++.++.++...+.....
T Consensus 109 ~~~~~~---~~~~i~~~~~t~~~~~P~~l~~ 136 (358)
T 4gs5_A 109 TEPTAN---PLAGLDHADFDFVAMVPMQLQS 136 (358)
T ss_dssp ECCCSC---TTTTCSSCCCSEEEECHHHHHH
T ss_pred cCcccc---HHHHHHHhCCeEEEcChHHHHH
Confidence 765533 2456788888888887654433
No 52
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=79.51 E-value=14 Score=35.13 Aligned_cols=86 Identities=10% Similarity=0.011 Sum_probs=64.8
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH--HHH-HHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceE
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE--FVI-MFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~--~~~-~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
..+|.+.+...+...... .++.++|++...+|-+.. ... .+++++..|+..+..+ ..+.+.+...+++.++++
T Consensus 200 V~~th~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 275 (539)
T 1mdb_A 200 IPRTHDDYIYSLKRSVEV---CWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSP-SPSPDDAFPLIEREKVTI 275 (539)
T ss_dssp EEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECS-SSSHHHHHHHHHHHTCSE
T ss_pred EEEehHHHHHHHHHHHHh---hCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEECC-CCCHHHHHHHHHHcCCeE
Confidence 468999888776665544 378899999988886533 333 5788899999988765 467888999999999999
Q ss_pred EEecCCchhHHHH
Q 014065 106 LLTPAEGNAAAQA 118 (431)
Q Consensus 106 ii~~~~~~~~~~~ 118 (431)
+...+.....+..
T Consensus 276 ~~~~P~~~~~l~~ 288 (539)
T 1mdb_A 276 TALVPPLAMVWMD 288 (539)
T ss_dssp EEECHHHHHHHHH
T ss_pred EEccHHHHHHHHh
Confidence 9988775555443
No 53
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=78.19 E-value=7.3 Score=37.21 Aligned_cols=96 Identities=16% Similarity=0.127 Sum_probs=69.3
Q ss_pred CcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH--HHHHHHHHHHhCcEEEecCCC
Q 014065 19 SKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE--FVIMFLAVIRARATAAPLNAA 88 (431)
Q Consensus 19 ~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~ 88 (431)
+.+|++... +..+|.+.+...+......+...++.++|++...+|-... +...+++++ .|+..+..+ .
T Consensus 192 ~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~-~ 269 (548)
T 2d1s_A 192 EQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT-K 269 (548)
T ss_dssp TCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC-C
T ss_pred CCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC-C
Confidence 667776542 2458999888776665544333578899999888887533 333466777 999988775 4
Q ss_pred CCHHHHHHHHhcCCceEEEecCCchhHH
Q 014065 89 YTPDEFEFYLSDSESKLLLTPAEGNAAA 116 (431)
Q Consensus 89 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 116 (431)
.+.+.+...+++.++++++..+.....+
T Consensus 270 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l 297 (548)
T 2d1s_A 270 FDEETFLKTLQDYKCTSVILVPTLFAIL 297 (548)
T ss_dssp CCHHHHHHHHHHTTEEEEEECHHHHHHH
T ss_pred CCHHHHHHHHHHcCCcEEEecHHHHHHH
Confidence 6788899999999999999877654443
No 54
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=77.31 E-value=15 Score=35.04 Aligned_cols=96 Identities=13% Similarity=0.036 Sum_probs=69.9
Q ss_pred CCcceEEecC-C-------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHH--HH-HHHHHHHhCcEEEecC
Q 014065 18 SSKRALSVSG-K-------FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEF--VI-MFLAVIRARATAAPLN 86 (431)
Q Consensus 18 p~~~a~~~~~-~-------~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~--~~-~~lA~~~~G~~~v~l~ 86 (431)
++.+|++... | ..+|.+.+...+..++.. .++.++|++...+|....+ .. .+++++..|+..+..+
T Consensus 190 ~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~ 266 (544)
T 3o83_A 190 ADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEI---CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMAP 266 (544)
T ss_dssp TTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECS
T ss_pred ccceEEEEECCCcccCCceEEechHHHHHHHHHHHHH---hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEECC
Confidence 4666766432 1 468999988777666554 4889999999998865433 22 4788889999888765
Q ss_pred CCCCHHHHHHHHhcCCceEEEecCCchhHHH
Q 014065 87 AAYTPDEFEFYLSDSESKLLLTPAEGNAAAQ 117 (431)
Q Consensus 87 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 117 (431)
. .....+...+++.+++++...+.....+.
T Consensus 267 ~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 296 (544)
T 3o83_A 267 N-PEPLNCFSIIQRHQVNMASLVPSAVIMWL 296 (544)
T ss_dssp S-CCHHHHHHHHHHHTCCEEEECHHHHHHHH
T ss_pred C-CCHHHHHHHHHHHCCCEEEechHHHHHHH
Confidence 4 57788888999999999998876554443
No 55
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=76.90 E-value=25 Score=32.95 Aligned_cols=85 Identities=16% Similarity=0.186 Sum_probs=63.2
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|+..+...+..+.. ..++.+++++...++-+. .+...+++++..|+..+..+. .....++...+++.+++.
T Consensus 28 ~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~vpl~~-~~~~~~l~~~l~~~~~~~ 104 (504)
T 1t5h_X 28 LRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSA--DVVIAILALHRLGAVPALLNP-RLKSAELAELIKRGEMTA 104 (504)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCH--HHHHHHHHHHHHTCEEEEECT-TSCHHHHHHHHHHTTCSE
T ss_pred ceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHhCcEEEecCC-ccChHHHHHHHhhcCCcE
Confidence 46899988777665544 347889999999888543 345558889999999986654 668888999999999998
Q ss_pred eec--chHHHHHH
Q 014065 256 YTA--VPTIHQIV 266 (431)
Q Consensus 256 ~~~--~p~~~~~l 266 (431)
++. .+.....+
T Consensus 105 ~i~~~~~~~~~~~ 117 (504)
T 1t5h_X 105 AVIAVGRQVADAI 117 (504)
T ss_dssp EEECC--CHHHHH
T ss_pred EEEecchhhhhhh
Confidence 888 66555444
No 56
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=76.21 E-value=24 Score=33.91 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=70.6
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
.++.++++..... | ....+|...+...+..++. ..++.++|++...++-+. .++..+++++..|+..+-.+
T Consensus 69 ~pd~~Al~~~~~~--g--~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~--e~~~~~lA~~~~Gav~vpl~ 142 (580)
T 3etc_A 69 SPEKLAMIWCDDY--G--NEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRY--DFWYCMLGLHKLGAIAVPAT 142 (580)
T ss_dssp CTTCEEEEEEESS--S--CEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCT--HHHHHHHHHHHHTCEEEECC
T ss_pred CCCCEEEEEEcCC--C--CEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhCCEEEEeCC
Confidence 4677777654321 1 2457899988776665544 458899999999988543 34556889999999998765
Q ss_pred CCCCChhhHHHHHHHhcceeeecchH
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPT 261 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~ 261 (431)
. .+...++...+++.+++.++..+.
T Consensus 143 ~-~~~~~~l~~~l~~~~~~~ii~~~~ 167 (580)
T 3etc_A 143 H-MLKTRDIVYRIEKAGLKMIVCIAE 167 (580)
T ss_dssp T-TCCHHHHHHHHHHHTCCEEEEESS
T ss_pred c-cCCHHHHHHHHHhcCCCEEEEecc
Confidence 4 678899999999999998887543
No 57
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=76.10 E-value=32 Score=32.84 Aligned_cols=85 Identities=12% Similarity=0.131 Sum_probs=65.4
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
-.+|...+...+..+.. ..++.++|++...++-+. .+...+++++..|+..+..+. .+....+...+++.++..
T Consensus 63 ~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~Gav~vpl~~-~~~~~~l~~il~~~~~~~ 139 (563)
T 1amu_A 63 EQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSI--DLFIGILAVLKAGGAYVPIDI-EYPKERIQYILDDSQARM 139 (563)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH--HHHHHHHHHHHTTCEEEECCT-TSCHHHHHHHHHHHTCSE
T ss_pred ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH--HHHHHHHHHHHhCCEEEEeCC-CCcHHHHHHHHHhcCCCE
Confidence 36899988776665544 347889999999888543 345558889999999987664 678889999999999999
Q ss_pred eecchHHHHHH
Q 014065 256 YTAVPTIHQIV 266 (431)
Q Consensus 256 ~~~~p~~~~~l 266 (431)
++..+.....+
T Consensus 140 li~~~~~~~~~ 150 (563)
T 1amu_A 140 LLTQKHLVHLI 150 (563)
T ss_dssp EEECGGGHHHH
T ss_pred EEEcCchhhhh
Confidence 99887665443
No 58
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=75.84 E-value=16 Score=34.59 Aligned_cols=85 Identities=13% Similarity=0.119 Sum_probs=64.5
Q ss_pred eeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhccee
Q 014065 179 VPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATW 255 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (431)
..+|...+...+..+.. ..++.++|++...++-+. .+...+++++..|+..+..+. .+...++...+++.+++.
T Consensus 47 ~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~vpl~~-~~~~~~l~~~l~~~~~~~ 123 (529)
T 2v7b_A 47 GSTTYGELEERARRFASALRTLGVHPEERILLVMLDTV--ALPVAFLGALYAGVVPVVANT-LLTPADYVYMLTHSHARA 123 (529)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSST--HHHHHHHHHHHHTCEEEECCT-TCCHHHHHHHHHHHTCSE
T ss_pred CCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHHcCceEEecCc-ccCHHHHHHHHhccCCeE
Confidence 35899988777665544 457889999999888644 334558889999999887664 568889999999999999
Q ss_pred eecchHHHHHH
Q 014065 256 YTAVPTIHQIV 266 (431)
Q Consensus 256 ~~~~p~~~~~l 266 (431)
++..+.....+
T Consensus 124 vi~~~~~~~~~ 134 (529)
T 2v7b_A 124 VIASGALVQNV 134 (529)
T ss_dssp EEEEGGGHHHH
T ss_pred EEechhhhhHH
Confidence 88877655443
No 59
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=74.12 E-value=24 Score=33.22 Aligned_cols=96 Identities=11% Similarity=0.069 Sum_probs=70.2
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
++.++++.. + +...+|...+...+..+.. ..++.++|++...++-+. .+...+++++..|+..+..+.
T Consensus 30 p~~~A~~~~--~-----~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~vpl~~ 100 (517)
T 3r44_A 30 PRLQAYVEP--S-----TDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSV--EFCCLFYGAAKLGAVAVPINT 100 (517)
T ss_dssp TTSEEEEEG--G-----GTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH--HHHHHHHHHHHHTCEEEECCT
T ss_pred CCCeEEEeC--C-----cCceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCH--HHHHHHHHHHHhCcEEEecCc
Confidence 456666542 1 2246899988777665554 447899999999988543 345558899999999987664
Q ss_pred CCCChhhHHHHHHHhcceeeecchHHHHH
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVPTIHQI 265 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 265 (431)
......+...+++.+++.++..+.....
T Consensus 101 -~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (517)
T 3r44_A 101 -RLAAPEVSFILSDSGSKVVIYGAPSAPV 128 (517)
T ss_dssp -TSCHHHHHHHHHHHTCSEEEECGGGHHH
T ss_pred -ccCHHHHHHHHHhcCceEEEECCchHHH
Confidence 6788899999999999998877655443
No 60
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=74.06 E-value=42 Score=31.04 Aligned_cols=107 Identities=14% Similarity=0.077 Sum_probs=73.5
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh---cCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKSVY---KLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
.++.++++..............+|...+...+..++..+ +. ++|++...++-.. .++..+++++..|+..+..+
T Consensus 37 ~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~ 113 (480)
T 3t5a_A 37 QPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGL--EYVVAFLGALQAGRIAVPLS 113 (480)
T ss_dssp STTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSH--HHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcH--HHHHHHHHHHHhCcEEEeeC
Confidence 356677665442111111236789999988777766554 44 7899888887543 34555889999999988654
Q ss_pred CC--CCChhhHHHHHHHhcceeeecchHHHHHHHh
Q 014065 236 AG--RFSASTFWQDMIKYNATWYTAVPTIHQIVLD 268 (431)
Q Consensus 236 ~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 268 (431)
.. ....+++...+++.++..++..+.....+.+
T Consensus 114 ~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 148 (480)
T 3t5a_A 114 VPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQ 148 (480)
T ss_dssp SCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHH
T ss_pred CCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHH
Confidence 21 2357788889999999999998887766554
No 61
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=73.13 E-value=38 Score=33.05 Aligned_cols=95 Identities=15% Similarity=0.189 Sum_probs=68.9
Q ss_pred CCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCC
Q 014065 160 PSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAA 236 (431)
Q Consensus 160 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 236 (431)
++.++++... ..+| ....+|...|...+..+.. ..++.++|++...+|... .+...+++++..|+..+....
T Consensus 90 pd~~Al~~~~-~~~~--~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~--e~vva~lA~~~~Gav~vpl~~ 164 (652)
T 1pg4_A 90 GDRTAIIWEG-DDTS--QSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVP--EAAVAMLACARIGAVHSVIFG 164 (652)
T ss_dssp TTSEEEEEEC-SSTT--CEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSH--HHHHHHHHHHHHTCEEEECCT
T ss_pred CCceEEEEEc-CCCC--ceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH--HHHHHHHHHHHcCcEEEecCC
Confidence 5666665432 2122 2356899998777665544 458899999999988654 335558889999999887664
Q ss_pred CCCChhhHHHHHHHhcceeeecch
Q 014065 237 GRFSASTFWQDMIKYNATWYTAVP 260 (431)
Q Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~p 260 (431)
.+.+..+...+++.++..++...
T Consensus 165 -~~~~~~l~~~l~~~~~~~li~~~ 187 (652)
T 1pg4_A 165 -GFSPEAVAGCIIDSSSRLVITAD 187 (652)
T ss_dssp -TSCHHHHHHHHHHHTCSEEEEES
T ss_pred -CCCHHHHHHHHHhcCCCEEEEcC
Confidence 67899999999999998887754
No 62
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=72.35 E-value=16 Score=32.30 Aligned_cols=65 Identities=14% Similarity=0.004 Sum_probs=48.0
Q ss_pred HHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 47 LVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 47 L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
..+.| +++|+.|.+....+-.-..+.++|.+.|..++.+-|......-...++..++++++++..
T Consensus 62 a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 62 AEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 34455 488988645555577778888888888997776656555556677889999999999764
No 63
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=71.49 E-value=32 Score=33.26 Aligned_cols=97 Identities=9% Similarity=-0.083 Sum_probs=70.2
Q ss_pred CCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc--HHHHH-HHHHHHHhCcEEEecC
Q 014065 18 SSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNT--VEFVI-MFLAVIRARATAAPLN 86 (431)
Q Consensus 18 p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~--~~~~~-~~lA~~~~G~~~v~l~ 86 (431)
|+.+|++... +..+|.+.+...+......+ ++.++|++...+|.+ ..... .+++++..|+..+..+
T Consensus 183 ~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~~ 259 (617)
T 3rg2_A 183 ADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC---QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAA 259 (617)
T ss_dssp TTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEECS
T ss_pred CCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhc---CCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEeC
Confidence 4666766432 25689998887776665544 788999999998854 33333 4788888999888765
Q ss_pred CCCCHHHHHHHHhcCCceEEEecCCchhHHHH
Q 014065 87 AAYTPDEFEFYLSDSESKLLLTPAEGNAAAQA 118 (431)
Q Consensus 87 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 118 (431)
. .+...+...+++.+++++...+.....+..
T Consensus 260 ~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 290 (617)
T 3rg2_A 260 D-PSATLCFPLIEKHQVNVTALVPPAVSLWLQ 290 (617)
T ss_dssp S-CCHHHHHHHHHHTTCCEEEECHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHhCCcEEEcchHHHHHHHH
Confidence 4 477788889999999999988775555443
No 64
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=71.20 E-value=37 Score=33.19 Aligned_cols=97 Identities=15% Similarity=0.268 Sum_probs=70.4
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH----HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS----VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLP 234 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 234 (431)
.++.++++... ..+| ....+|...|...+..++. ..++.++|++...+|..- .+...+++++..|+..+..
T Consensus 95 ~pd~~Al~~~~-~~~~--~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~--e~v~a~lA~~~~Gav~vpl 169 (663)
T 1ry2_A 95 TPNKKAIIFEG-DEPG--QGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVP--EAIITLLAISRIGAIHSVV 169 (663)
T ss_dssp CTTSEEEEEEC-SSTT--CCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSH--HHHHHHHHHHHTTCEEEEC
T ss_pred CCCceEEEEEc-CCCC--ceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEEee
Confidence 45677776432 2122 2346899988776665543 457889999999998654 3455588999999998876
Q ss_pred CCCCCChhhHHHHHHHhcceeeecchH
Q 014065 235 AAGRFSASTFWQDMIKYNATWYTAVPT 261 (431)
Q Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~p~ 261 (431)
.. .+....+...+++.++++++....
T Consensus 170 ~~-~~~~~~l~~~l~~~~~~~li~~~~ 195 (663)
T 1ry2_A 170 FA-GFSSNSLRDRINDGDSKVVITTDE 195 (663)
T ss_dssp CT-TSCHHHHHHHHHHHTCSEEEEESB
T ss_pred CC-CCCHHHHHHHHHhcCCeEEEEccc
Confidence 64 678999999999999999887654
No 65
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=70.91 E-value=41 Score=32.08 Aligned_cols=80 Identities=15% Similarity=0.161 Sum_probs=62.4
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.++|++...++-+. .+...+++++..|+..+..+. .....++...+++.++..+
T Consensus 100 ~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~vpl~~-~~~~~~l~~~l~~~~~~~~ 176 (570)
T 4gr5_A 100 ELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGF--DMVVALLAVLKAGGGYTMLDP-QFPVERLALSLEDTGAPLL 176 (570)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH--HHHHHHHHHHHTTCEEEECCT-TSCHHHHHHHHHHHTCSEE
T ss_pred cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH--HHHHHHHHHHHHCCEEEEcCC-CChHHHHHHHHHhcCCCEE
Confidence 5899988777665544 457899999999988544 345558899999999987764 6788899999999999998
Q ss_pred ecchHH
Q 014065 257 TAVPTI 262 (431)
Q Consensus 257 ~~~p~~ 262 (431)
+.....
T Consensus 177 i~~~~~ 182 (570)
T 4gr5_A 177 VTSRPL 182 (570)
T ss_dssp EECTTT
T ss_pred Eecchh
Confidence 877654
No 66
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=70.49 E-value=25 Score=32.96 Aligned_cols=80 Identities=11% Similarity=0.053 Sum_probs=62.7
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.++|++...++-+. .+...+++++..|+..+..+. .....++...+++.+++.+
T Consensus 28 ~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~Ga~~vpl~~-~~~~~~l~~il~~~~~~~v 104 (503)
T 4fuq_A 28 KISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSV--EALVLYLATVRAGGVYLPLNT-AYTLHELDYFITDAEPKIV 104 (503)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCH--HHHHHHHHHHHTTCEEEECCT-TCCHHHHHHHHHHHCCSEE
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEecCC-CCCHHHHHHHHHhcCCcEE
Confidence 5899988777665544 347899999999888543 345558899999999987664 6788899999999999999
Q ss_pred ecchHH
Q 014065 257 TAVPTI 262 (431)
Q Consensus 257 ~~~p~~ 262 (431)
+..+..
T Consensus 105 i~~~~~ 110 (503)
T 4fuq_A 105 VCDPSK 110 (503)
T ss_dssp EECGGG
T ss_pred EECchh
Confidence 887654
No 67
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=67.93 E-value=23 Score=36.65 Aligned_cols=96 Identities=14% Similarity=0.137 Sum_probs=70.9
Q ss_pred CCCCeEEEEeccCCCCCCCeeeechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCC
Q 014065 159 DPSDVALFLHTSGTTSRPKGVPLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPA 235 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 235 (431)
.++.++++... +| ..+|...+...+..+.. ..++.++|++...++-+. .++..+++++..|+..+..+
T Consensus 74 ~pd~~Al~~~~---~~----~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~--e~~v~~lA~~~~Ga~~vpl~ 144 (979)
T 3tsy_A 74 FATKPCLINGP---TG----HVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCP--EFVLSFLAASFRGATATAAN 144 (979)
T ss_dssp TTTSEEEEETT---TC----CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCH--HHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCeEEEECC---CC----cEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCH--HHHHHHHHHHHcCCEEEeeC
Confidence 46777765422 22 46888888776665544 457899999999988653 44556889999999998765
Q ss_pred CCCCChhhHHHHHHHhcceeeecchHHHH
Q 014065 236 AGRFSASTFWQDMIKYNATWYTAVPTIHQ 264 (431)
Q Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~ 264 (431)
+ .+.+..+...+++.+++.++..+....
T Consensus 145 ~-~~~~~~l~~~l~~~~~~~vi~~~~~~~ 172 (979)
T 3tsy_A 145 P-FFTPAEIAKQAKASNTKLIITEARYVD 172 (979)
T ss_dssp T-TSCHHHHHHHHHHHTEEEEEECSTTTT
T ss_pred C-CCCHHHHHHHHHHcCCeEEEEChHHHH
Confidence 4 678899999999999999998765543
No 68
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=67.18 E-value=14 Score=35.44 Aligned_cols=95 Identities=9% Similarity=0.033 Sum_probs=68.4
Q ss_pred CCcceEEecC-C-------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHH--HHHHHHHHhCcEEEecCC
Q 014065 18 SSKRALSVSG-K-------FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFV--IMFLAVIRARATAAPLNA 87 (431)
Q Consensus 18 p~~~a~~~~~-~-------~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~~ 87 (431)
|+.+|++... | ..+|.+.+...+..++.. .++.++|++...+|.....- ..+++++..|+..+..++
T Consensus 166 ~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~ 242 (590)
T 3kxw_A 166 SNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTS---FHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMSP 242 (590)
T ss_dssp TTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEECCH
T ss_pred CCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHh---hCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEEeCH
Confidence 5666766432 1 458999998877766554 48899999999998865433 347889999999888765
Q ss_pred CC---CHHHHHHHHhcCCceEEEecCCchhH
Q 014065 88 AY---TPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 88 ~~---~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
.. ....+...+++.++.++...+.....
T Consensus 243 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 273 (590)
T 3kxw_A 243 FSFLQNPLSWLKHITKYKATISGSPNFAYDY 273 (590)
T ss_dssp HHHHHCTHHHHHHHHHHTCSEEEECTHHHHH
T ss_pred HHHHHCHHHHHHHHHHhCCeeecCChhHHHH
Confidence 42 45677888889999988776554433
No 69
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=66.92 E-value=23 Score=31.33 Aligned_cols=81 Identities=11% Similarity=0.002 Sum_probs=56.6
Q ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEec
Q 014065 30 DLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+=||++ +...+.+.....+.-+++|.+..+....+-.-+.+.++|.+.|..++.+=|...+..-...++..++++++++
T Consensus 62 tGSfK~-RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~ 140 (344)
T 3vc3_A 62 TASIAD-RPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTD 140 (344)
T ss_dssp TSBTTH-HHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCcHH-HHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEEC
Confidence 345553 2223334444433346788765666667777888889999999987777777667777888999999999987
Q ss_pred CC
Q 014065 110 AE 111 (431)
Q Consensus 110 ~~ 111 (431)
..
T Consensus 141 ~~ 142 (344)
T 3vc3_A 141 PA 142 (344)
T ss_dssp GG
T ss_pred CC
Confidence 54
No 70
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=63.91 E-value=13 Score=34.97 Aligned_cols=93 Identities=12% Similarity=0.155 Sum_probs=67.7
Q ss_pred CCcceEEecC-C-------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHHhCcEEEecCCC
Q 014065 18 SSKRALSVSG-K-------FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE-FVIMFLAVIRARATAAPLNAA 88 (431)
Q Consensus 18 p~~~a~~~~~-~-------~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~ 88 (431)
++.+|++... | ..+|.+.+...+...... .++.++|++...+|-+.. .+..+++++..|+..+.+++.
T Consensus 143 ~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 219 (512)
T 3fce_A 143 GDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVED---FNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAIDKD 219 (512)
T ss_dssp TTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHH---TTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEECCHH
T ss_pred CCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHh---cCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEECCHH
Confidence 4566665432 1 458998888766655443 488999999999887533 345678889999998888653
Q ss_pred --CCHHHHHHHHhcCCceEEEecCCch
Q 014065 89 --YTPDEFEFYLSDSESKLLLTPAEGN 113 (431)
Q Consensus 89 --~~~~~l~~~l~~~~~~~ii~~~~~~ 113 (431)
.+.+.+...+++.++.++...+...
T Consensus 220 ~~~~~~~~~~~i~~~~~t~~~~~P~~~ 246 (512)
T 3fce_A 220 MIARPKDLFASLEQSDIQVWTSTPSFA 246 (512)
T ss_dssp HHHSHHHHHHHHHHHCCCEEEECHHHH
T ss_pred HhhCHHHHHHHHHHcCCcEEEecHHHH
Confidence 4677888899999999998876543
No 71
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=63.51 E-value=13 Score=34.92 Aligned_cols=94 Identities=7% Similarity=0.084 Sum_probs=68.0
Q ss_pred CCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHHhCcEEEecCCC
Q 014065 18 SSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVE-FVIMFLAVIRARATAAPLNAA 88 (431)
Q Consensus 18 p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~ 88 (431)
++.+|++... +..+|.+.+...+..++.. .++.++|++...+|-+.. .+..+++++..|+..+.++..
T Consensus 142 ~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~ 218 (511)
T 3e7w_A 142 EHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICAD---FPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCVTKD 218 (511)
T ss_dssp TTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHH---STTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEECCHH
T ss_pred CCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---cCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEcChh
Confidence 4566666431 1468998887776655543 478899999998887533 345678899999998877653
Q ss_pred --CCHHHHHHHHhcCCceEEEecCCchh
Q 014065 89 --YTPDEFEFYLSDSESKLLLTPAEGNA 114 (431)
Q Consensus 89 --~~~~~l~~~l~~~~~~~ii~~~~~~~ 114 (431)
...+.+...+++.++.+++..+....
T Consensus 219 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 246 (511)
T 3e7w_A 219 AVNKPKVLFEELKKSGLNVWTSTPSFVQ 246 (511)
T ss_dssp HHHSHHHHHHHHHHHCCSEEEECHHHHH
T ss_pred hhcCHHHHHHHHHHcCCcEEEecHHHHH
Confidence 45677888999999999988776443
No 72
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=58.34 E-value=60 Score=30.83 Aligned_cols=86 Identities=10% Similarity=0.044 Sum_probs=63.9
Q ss_pred eeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCC-------hhhHHHHH
Q 014065 179 VPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFS-------ASTFWQDM 248 (431)
Q Consensus 179 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~-------~~~~~~~i 248 (431)
-.+|...+...+..+... .++.+++++...++-+. .++..+++++..|+..+..+. .+. ...+...+
T Consensus 48 ~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~--~~~~~~lA~~~~G~~~vpl~~-~~~~~~~~~~~~~l~~~l 124 (576)
T 3gqw_A 48 DQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSS--EFVEAFFACQYAGLVAVPLAI-PMGVGQRDSWSAKLQGLL 124 (576)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSH--HHHHHHHHHHHTTCEEEEECC-CSSSSSHHHHHHHHHHHH
T ss_pred eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHHhCCeEeecCC-CCcccchhhHHHHHHHHH
Confidence 468999988776665543 47889999999988644 345558899999999886653 333 57788888
Q ss_pred HHhcceeeecchHHHHHHH
Q 014065 249 IKYNATWYTAVPTIHQIVL 267 (431)
Q Consensus 249 ~~~~~t~~~~~p~~~~~l~ 267 (431)
+..++..++........+.
T Consensus 125 ~~~~~~~ii~~~~~~~~~~ 143 (576)
T 3gqw_A 125 ASCQPAAIITGDEWLPLVN 143 (576)
T ss_dssp HHHCCSEEEECGGGHHHHH
T ss_pred HhcCCCEEEecHHHHHHHH
Confidence 8999999988877655543
No 73
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=57.79 E-value=66 Score=26.13 Aligned_cols=92 Identities=9% Similarity=-0.013 Sum_probs=54.9
Q ss_pred CeEEEecC-h-hhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeec--c----hHH--HHHHHhcccC
Q 014065 203 DSTVIVLP-L-FHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTA--V----PTI--HQIVLDRHVA 272 (431)
Q Consensus 203 ~~~~~~~p-~-~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~--~----p~~--~~~l~~~~~~ 272 (431)
.+++...+ . .|..|.......--..|..++.... ..+++++.+.+.+++++.+.+ + ++. +..+.+....
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~-~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~ 171 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGV-DVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNE 171 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCS-SCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHH
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCC-CCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHH
Confidence 45555443 3 6777877634444456666654432 678999999999999987777 2 221 3333333332
Q ss_pred CCCCCCCCccEEEeccCCCcHHHHHH
Q 014065 273 KPEPVYPKLRFIRSCSASLAPVILSR 298 (431)
Q Consensus 273 ~~~~~~~~l~~i~~~g~~~~~~~~~~ 298 (431)
.... ..++ +++||.+++++..+.
T Consensus 172 ~~~~--~~v~-v~vGG~~~~~~~a~~ 194 (215)
T 3ezx_A 172 EKLR--DSVK-CMFGGAPVSDKWIEE 194 (215)
T ss_dssp TTCG--GGSE-EEEESSSCCHHHHHH
T ss_pred cCCC--CCCE-EEEECCCCCHHHHHH
Confidence 2110 1233 788999999875543
No 74
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=57.52 E-value=42 Score=31.40 Aligned_cols=95 Identities=14% Similarity=0.129 Sum_probs=66.8
Q ss_pred CCcceEEecC--------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH--HHHHHHHHHHHhCcEEEecCC
Q 014065 18 SSKRALSVSG--------KFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTV--EFVIMFLAVIRARATAAPLNA 87 (431)
Q Consensus 18 p~~~a~~~~~--------~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~ 87 (431)
++.+|++... +..+|.+.+...+..+...+ ++.++|++...+|... .++..+++.+..|+..+..+
T Consensus 154 ~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~- 229 (505)
T 3nyq_A 154 DGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLG- 229 (505)
T ss_dssp TTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECS-
T ss_pred CCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHh---CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECC-
Confidence 4566665431 14689999988887766655 7889999988887642 23445788999999988774
Q ss_pred CCCHHHHHHHHhcCCceEEEecCCchhHHH
Q 014065 88 AYTPDEFEFYLSDSESKLLLTPAEGNAAAQ 117 (431)
Q Consensus 88 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 117 (431)
..+.+.+...+ +.++..++..+.....+.
T Consensus 230 ~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~ 258 (505)
T 3nyq_A 230 RFSTEGAAREL-NDGATMLFGVPTMYHRIA 258 (505)
T ss_dssp SCCHHHHHHHH-TTTCCEEEECHHHHHHHH
T ss_pred CCChHHHHHHH-hhCCeEEEehHHHHHHHH
Confidence 45666666767 678888888776544443
No 75
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=56.02 E-value=83 Score=27.20 Aligned_cols=79 Identities=11% Similarity=0.022 Sum_probs=49.4
Q ss_pred cccHHHHHHHHHHHHHHHHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 30 DLTYSRIHELVERAASRLVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+-|+++--. ..+...+.+.| +++|+.|.. ...+-.-..+.++|.+.|..++.+-|......-...++..+++++++
T Consensus 43 tgSfK~R~a--~~~l~~a~~~g~~~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~ 119 (313)
T 2q3b_A 43 ANSVKDRIG--VAMLQAAEQAGLIKPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILT 119 (313)
T ss_dssp TSBTHHHHH--HHHHHHHHHTTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred CCcHHHHHH--HHHHHHHHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEe
Confidence 445555322 22223334455 467776655 44555666677777899987776655544455566788899999998
Q ss_pred cCC
Q 014065 109 PAE 111 (431)
Q Consensus 109 ~~~ 111 (431)
+..
T Consensus 120 ~~~ 122 (313)
T 2q3b_A 120 PGA 122 (313)
T ss_dssp CGG
T ss_pred CCC
Confidence 863
No 76
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=55.14 E-value=80 Score=27.85 Aligned_cols=78 Identities=15% Similarity=0.129 Sum_probs=48.5
Q ss_pred cccHHHHHHHH--HHHH-HHHHH-cCCCCCCEEEEECCC-cHHHHHHHHHHHHhCcE-EEecCCCCCHHHHHHHHhcCCc
Q 014065 30 DLTYSRIHELV--ERAA-SRLVA-AGINAGDVVALTFPN-TVEFVIMFLAVIRARAT-AAPLNAAYTPDEFEFYLSDSES 103 (431)
Q Consensus 30 ~~Ty~el~~~~--~~~a-~~L~~-~gl~~gd~V~i~~~n-~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~l~~~l~~~~~ 103 (431)
.+++.+..... -..| ..|.+ .++++|++|+|.... .+-.+++.+|- ..|+. ++........++....++..++
T Consensus 139 ~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak-~~Ga~vi~~~~~~~~~~~~~~~~~~lGa 217 (357)
T 1zsy_A 139 DIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA-ALGLRTINVVRDRPDIQKLSDRLKSLGA 217 (357)
T ss_dssp SSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHH-HHTCEEEEEECCCSCHHHHHHHHHHTTC
T ss_pred CCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHH-HcCCEEEEEecCccchHHHHHHHHhcCC
Confidence 57777754321 1122 23444 489999999999984 56666666665 46874 4444444444445566778888
Q ss_pred eEEEe
Q 014065 104 KLLLT 108 (431)
Q Consensus 104 ~~ii~ 108 (431)
+.++.
T Consensus 218 ~~vi~ 222 (357)
T 1zsy_A 218 EHVIT 222 (357)
T ss_dssp SEEEE
T ss_pred cEEEe
Confidence 88774
No 77
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=54.32 E-value=37 Score=31.86 Aligned_cols=78 Identities=13% Similarity=0.064 Sum_probs=59.3
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..++.+++++...++-+. .++..+++++..|+..+..+. ......+...+++.+++.+
T Consensus 29 ~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~v~vpl~~-~~~~~~l~~il~~~~~~~i 105 (521)
T 3l8c_A 29 RRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTY--DMLATFVALTKSGHAYIPVDV-HSAPERILAIIEIAKPSLI 105 (521)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSH--HHHHHHHHHHHTTCCEEEEET-TSCHHHHHHHHHHSCCSEE
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH--HHHHHHHHHHHhCCEEEecCc-cccHHHHHHHHHhCCCCEE
Confidence 4788988777665554 457889999988877543 445558888999998886553 6688899999999999888
Q ss_pred ecch
Q 014065 257 TAVP 260 (431)
Q Consensus 257 ~~~p 260 (431)
+...
T Consensus 106 i~~~ 109 (521)
T 3l8c_A 106 IAIE 109 (521)
T ss_dssp EESS
T ss_pred EecC
Confidence 7654
No 78
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=53.29 E-value=1.1e+02 Score=26.29 Aligned_cols=64 Identities=16% Similarity=0.070 Sum_probs=43.9
Q ss_pred HHHcC-CCCCC--EEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 47 LVAAG-INAGD--VVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 47 L~~~g-l~~gd--~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
+.+.| +++|+ .|.. ...+-.-..+.++|.+.|..++.+-|......-...++..++++++++..
T Consensus 51 a~~~g~~~~g~~~~vv~-assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~ 117 (304)
T 1ve1_A 51 AEERGILRPGSGQVIVE-PTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPE 117 (304)
T ss_dssp HHHTTSCCTTSCCEEEE-SCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTT
T ss_pred HHHcCCCCCCCccEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33445 56776 5544 45566666777778899987776655444455666788889999999865
No 79
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=53.20 E-value=1.4e+02 Score=28.20 Aligned_cols=97 Identities=13% Similarity=0.041 Sum_probs=65.4
Q ss_pred CCCCeEEEEeccCCCCCCC--eeeechHHHHHHHHHHHHH---hcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEe
Q 014065 159 DPSDVALFLHTSGTTSRPK--GVPLTQNNLAASVSNIKSV---YKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTL 233 (431)
Q Consensus 159 ~~~~~~~i~~TSGtTG~pK--~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 233 (431)
.++.++++... +..+..+ .-.+|...+...+..+... .+. ++|++...++-+. .++..+++++..|+..+.
T Consensus 33 ~p~~~A~~~~~-~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~--~~~~~~lA~~~~Gav~vp 108 (562)
T 3ite_A 33 HPEWKAVEVAT-GFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSL--IAFAIIVGIMKSGNTYVP 108 (562)
T ss_dssp CTTSEEEEEEE-CC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCH--HHHHHHHHHHHTTCEEEE
T ss_pred CCCchhhhccc-ccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCH--HHHHHHHHHHHhCCEEEe
Confidence 35666665432 2222222 2568999887776665543 356 6899988888543 345558899999999987
Q ss_pred CCCCCCChhhHHHHHHHhcceeeecch
Q 014065 234 PAAGRFSASTFWQDMIKYNATWYTAVP 260 (431)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~p 260 (431)
.+. .+...++...+++.++..++...
T Consensus 109 l~~-~~~~~~l~~~l~~~~~~~~i~~~ 134 (562)
T 3ite_A 109 IEA-GLPNDRKSFLLRDSRAAMAFVCD 134 (562)
T ss_dssp CCT-TSCHHHHHHHHHHHTCSEEEECT
T ss_pred cCC-cCHHHHHHHHHHhcCCCEEEEcc
Confidence 654 67888999999999988877653
No 80
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=53.20 E-value=89 Score=26.91 Aligned_cols=64 Identities=17% Similarity=0.116 Sum_probs=43.4
Q ss_pred HHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 47 LVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 47 L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
+.+.| +++|+.|.. ...+-.-..+.++|.+.|..++.+-|......-...++..++++++++..
T Consensus 56 a~~~g~~~~g~~vv~-assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 56 AEKAGKLKPGDTIVE-PTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGA 120 (308)
T ss_dssp HHHTTCCCTTCEEEE-ECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33445 467776655 44555666677778889987776655444455566778899999998764
No 81
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=52.99 E-value=86 Score=27.60 Aligned_cols=63 Identities=11% Similarity=0.042 Sum_probs=43.0
Q ss_pred HHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 48 VAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 48 ~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
.+.| +++|+.|..... +-.-..+.++|.+.|..++.+-|......-...++..++++++++..
T Consensus 70 ~~~g~~~~g~~vv~aSs-GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 70 IKDGRLKPGMEIIESTS-GNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp HHHTSSCTTCEEEEECS-SHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 3445 477776665543 55556667777889987766555544455667788899999998764
No 82
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=52.36 E-value=62 Score=28.15 Aligned_cols=64 Identities=17% Similarity=0.063 Sum_probs=43.9
Q ss_pred HHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 48 VAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 48 ~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
.+.| +++|+...+....+-.-..+.++|.+.|..++.+-|......-...++..++++++++..
T Consensus 58 ~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 58 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 122 (322)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 4555 466753333355566677777888899997777655544555667888899999998754
No 83
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=51.75 E-value=61 Score=29.66 Aligned_cols=63 Identities=16% Similarity=0.047 Sum_probs=46.5
Q ss_pred HHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecC
Q 014065 48 VAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 48 ~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
.+.| +++|....+....+-.-..+.++|.+.|..++.+-|......-...++..++++++++.
T Consensus 166 ~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 166 EQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred HHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECC
Confidence 4556 47775544455557777788888999999877666665556667788999999999975
No 84
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=50.87 E-value=49 Score=29.05 Aligned_cols=78 Identities=9% Similarity=0.059 Sum_probs=52.1
Q ss_pred cccHHHHHHHHHHH--H-HHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 30 DLTYSRIHELVERA--A-SRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 30 ~~Ty~el~~~~~~~--a-~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
.+++.|........ | +.++..++++||+|+|...-+.-.+++.+|....|+.++.+... .+. ..+.+..++..+
T Consensus 136 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~--~~r-~~~~~~~Ga~~~ 212 (348)
T 4eez_A 136 GLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN--QDK-LNLAKKIGADVT 212 (348)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESC--HHH-HHHHHHTTCSEE
T ss_pred CCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECc--HHH-hhhhhhcCCeEE
Confidence 57777754433332 2 33455689999999999887777788887777778776666433 333 456677788887
Q ss_pred EecC
Q 014065 107 LTPA 110 (431)
Q Consensus 107 i~~~ 110 (431)
+-..
T Consensus 213 i~~~ 216 (348)
T 4eez_A 213 INSG 216 (348)
T ss_dssp EEC-
T ss_pred EeCC
Confidence 7543
No 85
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=49.39 E-value=64 Score=28.23 Aligned_cols=61 Identities=15% Similarity=0.123 Sum_probs=39.3
Q ss_pred CCCCCCEEEEECCCcH------HHHHHHHH-HHHhCcEEEecCCCC------------CHHHHHHHHhcCCceEEEecCC
Q 014065 51 GINAGDVVALTFPNTV------EFVIMFLA-VIRARATAAPLNAAY------------TPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~------~~~~~~lA-~~~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
-+++||+|+|++|.+. +.+-.... +-..|..++.-+.-. ..+++...+.+-++++|++...
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 4789999999998742 22222222 234577766543221 2346788888899999998853
No 86
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=49.24 E-value=92 Score=30.08 Aligned_cols=77 Identities=8% Similarity=-0.064 Sum_probs=59.0
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..+..+++++...++-+. .++..+++.+..|+..+..+. ......+...+++.++..+
T Consensus 52 ~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~--~~vva~lailkaGa~~vpld~-~~p~~~l~~il~~~~~~~v 128 (620)
T 4dg8_A 52 SVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSR--ESITCLLAILLSGHHYLYIDL-KQPAAWNAELCRQVDCRLI 128 (620)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCH--HHHHHHHHHHHTTCEEEECCT-TSCHHHHHHHHHHHTEEEE
T ss_pred cCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH--HHHHHHHHHHHhCCEEEeeCc-cChHHHHHHHHHhCCCcEE
Confidence 5889988766665544 447899999998888543 445568899999999987764 5678888888899999888
Q ss_pred ecc
Q 014065 257 TAV 259 (431)
Q Consensus 257 ~~~ 259 (431)
...
T Consensus 129 l~~ 131 (620)
T 4dg8_A 129 LDC 131 (620)
T ss_dssp EEC
T ss_pred Eec
Confidence 744
No 87
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=49.20 E-value=1e+02 Score=26.71 Aligned_cols=64 Identities=11% Similarity=-0.022 Sum_probs=43.6
Q ss_pred HHHcCC-CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 47 LVAAGI-NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 47 L~~~gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
+.+.|. ++|+.|.... .+-.-..+.++|.+.|..++.+-|......-...++..++++++++..
T Consensus 53 a~~~g~~~~~~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 53 AEKDGTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGA 117 (316)
T ss_dssp HHHTTSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 344454 6776655543 466666777778899987666555444455667888899999998764
No 88
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=48.45 E-value=1.3e+02 Score=25.79 Aligned_cols=64 Identities=16% Similarity=0.103 Sum_probs=44.3
Q ss_pred HHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 47 LVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 47 L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
+.+.| +++|+.|.... .+-.-..+.++|.+.|..++.+-|......-...++..++++++++..
T Consensus 52 a~~~g~~~~g~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 116 (303)
T 2v03_A 52 AEKRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKE 116 (303)
T ss_dssp HHHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTT
T ss_pred HHHcCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33445 46777666665 355556667777899997777655554455667888899999999863
No 89
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=47.48 E-value=38 Score=23.36 Aligned_cols=46 Identities=15% Similarity=0.271 Sum_probs=30.6
Q ss_pred cccHHHHHHHHHHhcCC-------------cceEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECC
Q 014065 3 GVTLIGLLNQVIDQFSS-------------KRALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFP 63 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~-------------~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~ 63 (431)
..|+.++++....++|. ....+.-+++.+.+ +.-++.||.|+++-|
T Consensus 36 ~~Tv~~Ll~~L~~~~p~l~~~l~~~~g~~~~~v~v~VNg~~v~~---------------~~~L~dGDeV~i~pp 94 (98)
T 1vjk_A 36 GARVRDLIEEIKKRHEKFKEEVFGEGYDEDADVNIAVNGRYVSW---------------DEELKDGDVVGVFPP 94 (98)
T ss_dssp TCBHHHHHHHHHHHCGGGGGSCBCSSSCTTSSBEEEETTBCCCT---------------TCBCCTTCEEEEESC
T ss_pred CCCHHHHHHHHHhHChhHHHHhhccccccCCcEEEEECCEECCC---------------CCCCCCCCEEEEECC
Confidence 56899999998888761 22233335445441 446899999999865
No 90
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=47.02 E-value=1.2e+02 Score=26.99 Aligned_cols=61 Identities=7% Similarity=-0.054 Sum_probs=39.2
Q ss_pred HHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHhcCC--ceEEEec
Q 014065 46 RLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-----YTPDEFEFYLSDSE--SKLLLTP 109 (431)
Q Consensus 46 ~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~--~~~ii~~ 109 (431)
.|...++++||.|.+-.+....+ .-++...|+.++.++.+ .+.+.+...+...+ .++|+..
T Consensus 69 al~~l~~~~Gd~Vi~~~~~~~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~ 136 (377)
T 3ju7_A 69 AIQLKKRKKGKYALMPSFTFPAT---PLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY 136 (377)
T ss_dssp HHHHHSCTTCCEEEEESSSCTHH---HHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB
T ss_pred HHHHcCCCCcCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE
Confidence 34455788999988877665443 33556788877666532 36778888774333 6666643
No 91
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=46.72 E-value=75 Score=27.93 Aligned_cols=61 Identities=7% Similarity=0.073 Sum_probs=39.5
Q ss_pred CCCCCCEEEEECCCcHH------HHHHHHHHH-HhCcEEEecCCCC------------CHHHHHHHHhcCCceEEEecCC
Q 014065 51 GINAGDVVALTFPNTVE------FVIMFLAVI-RARATAAPLNAAY------------TPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~~------~~~~~lA~~-~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
-+++||+|+|++|.+.- .+-.....+ ..|..++.-+... ..+++...+.+-++++|++...
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 57899999999998732 222223333 4677766532111 2346777888889999998764
No 92
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=45.41 E-value=65 Score=27.93 Aligned_cols=75 Identities=19% Similarity=0.207 Sum_probs=46.9
Q ss_pred cccHHHHHHHHHH---HHHHHHHcCCCCCCEEEEECCC-cHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceE
Q 014065 30 DLTYSRIHELVER---AASRLVAAGINAGDVVALTFPN-TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 30 ~~Ty~el~~~~~~---~a~~L~~~gl~~gd~V~i~~~n-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
.+++.+....... .-+.|...++++|++|+|.... .+-.+++.+| ...|+..+.+. +.++ ..++++.+++.
T Consensus 125 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a-~~~Ga~vi~~~---~~~~-~~~~~~lGa~~ 199 (321)
T 3tqh_A 125 KLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLA-KQKGTTVITTA---SKRN-HAFLKALGAEQ 199 (321)
T ss_dssp TSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEE---CHHH-HHHHHHHTCSE
T ss_pred CCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHH-HHcCCEEEEEe---ccch-HHHHHHcCCCE
Confidence 5777776543322 1234455689999999999744 4555555555 46688766553 3444 45667778877
Q ss_pred EEec
Q 014065 106 LLTP 109 (431)
Q Consensus 106 ii~~ 109 (431)
++..
T Consensus 200 ~i~~ 203 (321)
T 3tqh_A 200 CINY 203 (321)
T ss_dssp EEET
T ss_pred EEeC
Confidence 6643
No 93
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=45.20 E-value=1.3e+02 Score=26.66 Aligned_cols=60 Identities=18% Similarity=0.147 Sum_probs=39.0
Q ss_pred HHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc-EEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 45 SRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA-TAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 45 ~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+.+...++++|++|+|...-..-.+++.+|- ..|+ .++.+... .+. ..+++..+++.++.
T Consensus 173 ~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~--~~~-~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 173 HGVDLSGIKAGSTVAILGGGVIGLLTVQLAR-LAGATTVILSTRQ--ATK-RRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSC--HHH-HHHHHHHTCSEEEC
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCC--HHH-HHHHHHcCCCEEEC
Confidence 3455568999999999987555566555555 6787 66655433 333 34556677777664
No 94
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=44.98 E-value=90 Score=29.45 Aligned_cols=62 Identities=13% Similarity=0.045 Sum_probs=45.5
Q ss_pred HHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecC
Q 014065 48 VAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 48 ~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
.+.| +++|+.|.. ...+-.-..+.++|.+.|..++.+-|......-...++..+++++++..
T Consensus 105 ~~~g~~~~g~~vv~-~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 167 (527)
T 3pc3_A 105 EEQGLLKPGYTIIE-PTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPT 167 (527)
T ss_dssp HHHTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred HHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCC
Confidence 3445 578887755 4455666777778888899877666665556667788999999999875
No 95
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=44.82 E-value=80 Score=28.21 Aligned_cols=61 Identities=8% Similarity=0.101 Sum_probs=40.3
Q ss_pred CCCCCCEEEEECCCcH------HHHHHHHHHH-HhCcEEEecCCCC------------CHHHHHHHHhcCCceEEEecCC
Q 014065 51 GINAGDVVALTFPNTV------EFVIMFLAVI-RARATAAPLNAAY------------TPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~------~~~~~~lA~~-~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
-+++||+|+|++|.+. +.+-.....+ ..|..++.-+... ..+++...+.+-++++|++...
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rG 118 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIG 118 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 6899999999999863 2222223333 4687776543221 2346777888889999999754
No 96
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=44.26 E-value=1.4e+02 Score=26.07 Aligned_cols=65 Identities=11% Similarity=0.034 Sum_probs=41.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc-EEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 43 AASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA-TAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 43 ~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
....+...++++|++|++...-+.-.+++.+|. ..|+ +.+.++. +.+ -..++++.+++.++...+
T Consensus 149 ~~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak-~~G~~~vi~~~~--~~~-k~~~a~~lGa~~~i~~~~ 214 (346)
T 4a2c_A 149 GLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAV-ALGAKSVTAIDI--SSE-KLALAKSFGAMQTFNSSE 214 (346)
T ss_dssp HHHHHHHTTCCTTSEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHH-HHHHHHHTTCSEEEETTT
T ss_pred HHHHHHHhccCCCCEEEEECCCCcchHHHHHHH-HcCCcEEEEEec--hHH-HHHHHHHcCCeEEEeCCC
Confidence 344455568999999999987666666555554 4554 3344432 233 345667788888876543
No 97
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=42.73 E-value=1.3e+02 Score=26.43 Aligned_cols=56 Identities=7% Similarity=-0.030 Sum_probs=33.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC----CCHHHHHHHHhcCCceEEEec
Q 014065 53 NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA----YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 53 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii~~ 109 (431)
++||.|.+..+....+.-...++...|+.++.++.. .+.+.+...++. +++++++.
T Consensus 87 ~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 146 (384)
T 1eg5_A 87 KRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-DTFLVSIM 146 (384)
T ss_dssp TTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-CCeEEEEE
Confidence 578887776665555444444445667766665432 356677777654 55666554
No 98
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=41.67 E-value=1.8e+02 Score=25.48 Aligned_cols=75 Identities=13% Similarity=0.150 Sum_probs=45.9
Q ss_pred cccHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc-EEEecCCCCCHHHHHHHHhcCCceE
Q 014065 30 DLTYSRIHELVERAA---SRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA-TAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a---~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
.+++.+..- ..-++ +.|...++++|++|+|...-++-..++.+|- ..|+ .++.+.. +.+. ..+++..+++.
T Consensus 145 ~l~~~~aa~-~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~-~~~a~~lGa~~ 219 (356)
T 1pl8_A 145 NVTFEEGAL-IEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAK-AMGAAQVVVTDL--SATR-LSKAKEIGADL 219 (356)
T ss_dssp TSCHHHHHH-HHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHHH-HHHHHHTTCSE
T ss_pred CCCHHHHHh-hchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHH-HHHHHHhCCCE
Confidence 577776432 22222 3344458999999999987556666666665 4687 5555543 2333 34456778877
Q ss_pred EEec
Q 014065 106 LLTP 109 (431)
Q Consensus 106 ii~~ 109 (431)
++..
T Consensus 220 vi~~ 223 (356)
T 1pl8_A 220 VLQI 223 (356)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 6643
No 99
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=40.79 E-value=2.1e+02 Score=26.00 Aligned_cols=55 Identities=18% Similarity=0.103 Sum_probs=26.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHH-HHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 52 INAGDVVALTFPNTVEFVIMFL-AVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~l-A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+++||.|++.-+.-....-.+- .+...|+.++.++.. ..+.++..++. +.++|++
T Consensus 118 ~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-d~~~l~~ai~~-~t~~v~~ 173 (430)
T 3ri6_A 118 ARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-DSLAVEHACDE-TTKLLFL 173 (430)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT-CHHHHHHHCCT-TEEEEEE
T ss_pred hCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-CHHHHHHhhCC-CCeEEEE
Confidence 4566666554444333222221 344556665555544 45555555543 4455553
No 100
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=40.59 E-value=55 Score=28.90 Aligned_cols=57 Identities=9% Similarity=-0.013 Sum_probs=40.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCc
Q 014065 55 GDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 55 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
.+.|... ..+-.-..+.++|.+.|..++.+-|......-...++..++++++++...
T Consensus 76 ~~~vv~~-SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~~ 132 (346)
T 3l6b_A 76 PKAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSD 132 (346)
T ss_dssp CSCEEEE-CSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 3444333 34556667778899999877666565555666788899999999998764
No 101
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=40.04 E-value=85 Score=27.54 Aligned_cols=61 Identities=15% Similarity=0.123 Sum_probs=39.5
Q ss_pred CCCCCCEEEEECCCcH------HHHHHHHHHH-HhCcEEEecCCCC------------CHHHHHHHHhcCCceEEEecCC
Q 014065 51 GINAGDVVALTFPNTV------EFVIMFLAVI-RARATAAPLNAAY------------TPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~------~~~~~~lA~~-~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
-+++||+|+|++|.+. +.+-...+.+ ..|..++.-+... ..+++...+.+-++++|++...
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 4789999999998864 2232333333 3677766543221 2346777888888999998753
No 102
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=39.11 E-value=1.9e+02 Score=25.10 Aligned_cols=64 Identities=14% Similarity=0.068 Sum_probs=45.8
Q ss_pred HHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 47 LVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 47 L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
..+.| +++++.|... ..+-.-..+.++|.+.|..++.+-|......-...++..++++++++..
T Consensus 64 a~~~g~l~~~~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 64 AEADGLLRPGATILEP-TSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp HHHTTCCCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECST
T ss_pred HHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 34445 5777776654 4466667777888888987776655555556677888999999999864
No 103
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=38.31 E-value=1.2e+02 Score=27.79 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=46.4
Q ss_pred cccHHHHHHHHHHHHH---HHHH---cCCCCCCEEEEECCCc-HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCC
Q 014065 30 DLTYSRIHELVERAAS---RLVA---AGINAGDVVALTFPNT-VEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSE 102 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~---~L~~---~gl~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 102 (431)
.+++.+...-...++. .|.+ .++++|++|+|....+ +-.+++.+| ...|+..+.+.. +.+.+. .++..+
T Consensus 198 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqla-k~~Ga~vi~~~~--~~~~~~-~~~~lG 273 (456)
T 3krt_A 198 HLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFA-LAGGANPICVVS--SPQKAE-ICRAMG 273 (456)
T ss_dssp TSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHH-HHTTCEEEEEES--SHHHHH-HHHHHT
T ss_pred CCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHH-HHcCCeEEEEEC--CHHHHH-HHHhhC
Confidence 6788776532222222 2322 4789999999999855 555555555 567887666542 444444 456778
Q ss_pred ceEEEec
Q 014065 103 SKLLLTP 109 (431)
Q Consensus 103 ~~~ii~~ 109 (431)
++.++..
T Consensus 274 a~~vi~~ 280 (456)
T 3krt_A 274 AEAIIDR 280 (456)
T ss_dssp CCEEEET
T ss_pred CcEEEec
Confidence 8877753
No 104
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=38.28 E-value=1.5e+02 Score=26.15 Aligned_cols=55 Identities=11% Similarity=0.127 Sum_probs=38.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-------CCHHHHHHHHhcCCceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-------YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+++||.|.+..+....+ ..++...|+.++.++.. ...+.+...++..++++|++.
T Consensus 106 ~~~gd~vl~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~ 167 (391)
T 3dzz_A 106 TSPGDQILVQEPVYNMF---YSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFC 167 (391)
T ss_dssp SCTTCEEEECSSCCHHH---HHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEE
T ss_pred CCCCCeEEECCCCcHHH---HHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEE
Confidence 46889888776665543 33556778877777653 678889998886677777654
No 105
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=37.96 E-value=1.3e+02 Score=26.57 Aligned_cols=78 Identities=13% Similarity=0.164 Sum_probs=48.8
Q ss_pred cccHHHHH---HHHHH---HHHHHHH--cCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcC
Q 014065 30 DLTYSRIH---ELVER---AASRLVA--AGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDS 101 (431)
Q Consensus 30 ~~Ty~el~---~~~~~---~a~~L~~--~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 101 (431)
.+++.+.. ..... .-+.|.+ .++++|++|+|...-.+-.+++.+|-...|+.++.+.. +.+.+ .+++..
T Consensus 154 ~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~--~~~~~-~~~~~l 230 (359)
T 1h2b_A 154 DISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEKL-KLAERL 230 (359)
T ss_dssp TCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHHH-HHHHHT
T ss_pred CCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeC--CHHHH-HHHHHh
Confidence 57777754 11111 2234555 68999999999998666677777766543886655543 33443 345677
Q ss_pred CceEEEecC
Q 014065 102 ESKLLLTPA 110 (431)
Q Consensus 102 ~~~~ii~~~ 110 (431)
+++.++...
T Consensus 231 Ga~~vi~~~ 239 (359)
T 1h2b_A 231 GADHVVDAR 239 (359)
T ss_dssp TCSEEEETT
T ss_pred CCCEEEecc
Confidence 888877543
No 106
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=36.72 E-value=94 Score=27.42 Aligned_cols=77 Identities=13% Similarity=0.028 Sum_probs=46.7
Q ss_pred cccHHHHHHHHHH---HHHHHHHcCCC-CCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceE
Q 014065 30 DLTYSRIHELVER---AASRLVAAGIN-AGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 30 ~~Ty~el~~~~~~---~a~~L~~~gl~-~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
.+++.+....... .-+.|.+.+++ +|++|+|...-.+-..++.+|-. .|+.++.+..+ .+.+....+..+++.
T Consensus 152 ~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~Vi~~~~~--~~~~~~~~~~lGa~~ 228 (357)
T 2cf5_A 152 GMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA-MGHHVTVISSS--NKKREEALQDLGADD 228 (357)
T ss_dssp SCCHHHHTGGGTHHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHH-HTCEEEEEESS--TTHHHHHHTTSCCSC
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeCC--hHHHHHHHHHcCCce
Confidence 5777764322111 12345556888 99999999875666666666654 68865555433 334444444677777
Q ss_pred EEec
Q 014065 106 LLTP 109 (431)
Q Consensus 106 ii~~ 109 (431)
++..
T Consensus 229 vi~~ 232 (357)
T 2cf5_A 229 YVIG 232 (357)
T ss_dssp EEET
T ss_pred eecc
Confidence 6643
No 107
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=36.56 E-value=92 Score=27.70 Aligned_cols=56 Identities=11% Similarity=-0.067 Sum_probs=40.7
Q ss_pred EECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 60 LTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 60 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
+....+-.-..+.++|.+.|..++.+-|..........++..++++++++....+.
T Consensus 97 v~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~~~a 152 (364)
T 4h27_A 97 VCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGELLDEA 152 (364)
T ss_dssp EECCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECSSTTHH
T ss_pred EEeCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 33444666677788888999877766566566667788899999999998754433
No 108
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=36.30 E-value=1.4e+02 Score=26.17 Aligned_cols=74 Identities=12% Similarity=0.013 Sum_probs=46.2
Q ss_pred cccHHHHHHHHHHH---HHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 30 DLTYSRIHELVERA---ASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 30 ~~Ty~el~~~~~~~---a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
.+++.+........ -+.|.+.++++|++|+|...-.+-.+++.+|- ..|+.++.+..+-. .+ ..+++.+++.+
T Consensus 149 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~~--~~-~~~~~lGa~~v 224 (348)
T 3two_A 149 NAPLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAV-AMGAEVSVFARNEH--KK-QDALSMGVKHF 224 (348)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHH-HTTCEEEEECSSST--TH-HHHHHTTCSEE
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCeEEEEeCCHH--HH-HHHHhcCCCee
Confidence 57777764322221 23455668999999999987555666666665 56887666554322 22 24456777777
Q ss_pred E
Q 014065 107 L 107 (431)
Q Consensus 107 i 107 (431)
+
T Consensus 225 ~ 225 (348)
T 3two_A 225 Y 225 (348)
T ss_dssp E
T ss_pred c
Confidence 7
No 109
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=36.13 E-value=90 Score=20.39 Aligned_cols=47 Identities=11% Similarity=0.039 Sum_probs=34.0
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 27 GKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 27 ~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
+...+.+.++.+. +.+.+..+++.|.++|..+.....+...+...|.
T Consensus 20 gA~~ip~~~l~~~-------~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~ 66 (85)
T 2jtq_A 20 GAINIPLKEVKER-------IATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGY 66 (85)
T ss_dssp TCEECCHHHHHHH-------HHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTC
T ss_pred CCEEcCHHHHHHH-------HHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCC
Confidence 4456777776543 3444667888999999988887777777777775
No 110
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=36.11 E-value=1.7e+02 Score=25.46 Aligned_cols=78 Identities=8% Similarity=0.020 Sum_probs=49.6
Q ss_pred ccHHHHHHHHHH---HHHHHHHc--CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceE
Q 014065 31 LTYSRIHELVER---AASRLVAA--GINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 31 ~Ty~el~~~~~~---~a~~L~~~--gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
+++.+....... .-+.|.+. ++++|++|++...-..-.+++.+|-..-|+.++.+.. +.+. ..++++.+++.
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~--~~~~-~~~~~~lGa~~ 219 (345)
T 3jv7_A 143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL--DDDR-LALAREVGADA 219 (345)
T ss_dssp CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--CHHH-HHHHHHTTCSE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHHH-HHHHHHcCCCE
Confidence 777775533322 22344443 7899999999988666777777776664666665543 3333 34567788888
Q ss_pred EEecCC
Q 014065 106 LLTPAE 111 (431)
Q Consensus 106 ii~~~~ 111 (431)
++...+
T Consensus 220 ~i~~~~ 225 (345)
T 3jv7_A 220 AVKSGA 225 (345)
T ss_dssp EEECST
T ss_pred EEcCCC
Confidence 876543
No 111
>2ayi_A Aminopeptidase T; metallopeptidase, hydrolase; 3.70A {Thermus thermophilus} SCOP: e.60.1.1
Probab=35.44 E-value=73 Score=28.91 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHc--CCCCCCEEEEECCCc-HH-HHHHHHHHHHhCcEEEecC
Q 014065 36 IHELVERAASRLVAA--GINAGDVVALTFPNT-VE-FVIMFLAVIRARATAAPLN 86 (431)
Q Consensus 36 l~~~~~~~a~~L~~~--gl~~gd~V~i~~~n~-~~-~~~~~lA~~~~G~~~v~l~ 86 (431)
+..+..++|..+.+. ++++|+.|.|..+.. .+ .-.+.-++.++|+.++.+.
T Consensus 4 ~~~~l~k~A~~~v~~~~~lq~Ge~vlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v~ 58 (408)
T 2ayi_A 4 FKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVI 58 (408)
T ss_dssp CHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEEE
Confidence 456788899988885 689999999998864 33 3344556777888776543
No 112
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=34.81 E-value=1.4e+02 Score=26.45 Aligned_cols=59 Identities=20% Similarity=0.260 Sum_probs=37.1
Q ss_pred HHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecC--CC---CCHHHHHHHHhcCCceEEEecC
Q 014065 48 VAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLN--AA---YTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 48 ~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~~---~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
...++++||.|.+..+...... -++...|+.++.++ +. ...+.+...++. ++++|++..
T Consensus 72 ~~~~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~ 135 (393)
T 1mdo_A 72 MALGIGEGDEVITPSMTWVSTL---NMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPVH 135 (393)
T ss_dssp HHTTCCTTCEEEEESSSCHHHH---HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCBC
T ss_pred HHcCCCCCCEEEeCCCccHhHH---HHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEeC
Confidence 3345688998888777655543 34456777666554 22 467778777764 567776543
No 113
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=34.76 E-value=35 Score=22.11 Aligned_cols=45 Identities=16% Similarity=0.239 Sum_probs=29.2
Q ss_pred cccHHHHHHHHHHhcCC--cc--eEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECC
Q 014065 3 GVTLIGLLNQVIDQFSS--KR--ALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFP 63 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~--~~--a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~ 63 (431)
..|+.++++....++|+ +. ++ .-+++.+.. +.-++.||.|+++-|
T Consensus 25 ~~tv~~ll~~l~~~~p~~~~v~~~v-~vNg~~v~~---------------~~~L~~gD~V~i~pp 73 (77)
T 2q5w_D 25 ALTVQQFEDLLFERYPQINNKKFQV-AVNEEFVQK---------------SDFIQPNDTVALIPP 73 (77)
T ss_dssp CEEHHHHHHHHHHHCGGGTTCCCEE-EETTEEECT---------------TSEECTTCEEEEECS
T ss_pred CCCHHHHHHHHHHHCcchhcceEEE-EECCEECCC---------------CCCcCCCCEEEEECC
Confidence 46888988888777764 33 33 334444432 135789999999865
No 114
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=34.62 E-value=2.2e+02 Score=24.52 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=37.1
Q ss_pred CCCCCCEEEEECCCc-HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEec
Q 014065 51 GINAGDVVALTFPNT-VEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 51 gl~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
++++|++|++....+ +-..++.+| ...|+..+.+.. +.+.+. .++..+++.++..
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~--~~~~~~-~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLL-KMKGAHTIAVAS--TDEKLK-IAKEYGAEYLINA 200 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEES--SHHHHH-HHHHTTCSEEEET
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeC--CHHHHH-HHHHcCCcEEEeC
Confidence 789999999999555 555555554 467887766644 344444 5566778777654
No 115
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=33.61 E-value=2.3e+02 Score=24.25 Aligned_cols=74 Identities=11% Similarity=0.003 Sum_probs=46.3
Q ss_pred CcccHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceE
Q 014065 29 FDLTYSRIHELVERAA---SRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a---~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
..+++.+.......++ +.|...++++|++|+|...-.+-.+++.+|- ..|+.++.+. + .+.+ ..+++.+++.
T Consensus 114 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qlak-~~Ga~Vi~~~-~--~~~~-~~~~~lGa~~ 188 (315)
T 3goh_A 114 DNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLN-NAGYVVDLVS-A--SLSQ-ALAAKRGVRH 188 (315)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHHH-HHTCEEEEEC-S--SCCH-HHHHHHTEEE
T ss_pred CCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEE-C--hhhH-HHHHHcCCCE
Confidence 3678888653333332 3333458899999999999445566666654 5688776665 2 2222 2345577888
Q ss_pred EE
Q 014065 106 LL 107 (431)
Q Consensus 106 ii 107 (431)
++
T Consensus 189 v~ 190 (315)
T 3goh_A 189 LY 190 (315)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 116
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=33.50 E-value=2.4e+02 Score=24.56 Aligned_cols=74 Identities=14% Similarity=0.127 Sum_probs=44.7
Q ss_pred cccHHHHHHHHHHHH---HHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 30 DLTYSRIHELVERAA---SRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a---~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
.+++.+..- ..-++ +.|...++++|++|+|...-.+-..++.+|- ..|+.++.+.. +.+.+ .+++..+++.+
T Consensus 142 ~~~~~~aa~-~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~-~~~~~lGa~~~ 216 (352)
T 1e3j_A 142 NVSLEEGAL-LEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAK-AYGAFVVCTAR--SPRRL-EVAKNCGADVT 216 (352)
T ss_dssp TSCHHHHHT-HHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CHHHH-HHHHHTTCSEE
T ss_pred CCCHHHHHh-hchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEcC--CHHHH-HHHHHhCCCEE
Confidence 577776432 22222 3344558999999999987556666666665 56886444432 33433 34556777766
Q ss_pred Ee
Q 014065 107 LT 108 (431)
Q Consensus 107 i~ 108 (431)
+.
T Consensus 217 ~~ 218 (352)
T 1e3j_A 217 LV 218 (352)
T ss_dssp EE
T ss_pred Ec
Confidence 64
No 117
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=33.37 E-value=2.3e+02 Score=24.22 Aligned_cols=62 Identities=16% Similarity=0.087 Sum_probs=39.4
Q ss_pred HHHcCC-CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 47 LVAAGI-NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 47 L~~~gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
+.+.|. +++ .| ....+-.-..+.++|.+.|..++.+-|......-...++..++++++++..
T Consensus 58 a~~~g~~~~~-vv--~aSsGN~g~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 120 (303)
T 1o58_A 58 AEKRGLLKNG-IV--EPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGE 120 (303)
T ss_dssp HHHTTCCTTC-EE--EECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCC-EE--EECchHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 334453 344 33 334445555666777789986666555444455666788899999998764
No 118
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=33.29 E-value=2.4e+02 Score=24.44 Aligned_cols=55 Identities=18% Similarity=0.142 Sum_probs=35.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecC--CC----CCHHHHHHHHhc----CCceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLN--AA----YTPDEFEFYLSD----SESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~~----~~~~~l~~~l~~----~~~~~ii~~ 109 (431)
+++||.|.+..+........ +...|+.++.++ .+ ...+.+...++. .+++++++.
T Consensus 90 ~~~gd~vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~ 154 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYSSYVA---AERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALIT 154 (371)
T ss_dssp CCTTCEEEEETTCCHHHHHH---HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEE
T ss_pred hCCCCEEEEccCcchHHHHH---HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEE
Confidence 46888888877766554433 566787766665 22 357778887764 355666554
No 119
>1zjc_A Aminopeptidase AMPS; metallopeptidase, hydrolase; 1.80A {Staphylococcus aureus subsp} SCOP: e.60.1.1
Probab=33.14 E-value=1.1e+02 Score=27.90 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHc--CCCCCCEEEEECCCc-HH-HHHHHHHHHHhCcEEEecC
Q 014065 36 IHELVERAASRLVAA--GINAGDVVALTFPNT-VE-FVIMFLAVIRARATAAPLN 86 (431)
Q Consensus 36 l~~~~~~~a~~L~~~--gl~~gd~V~i~~~n~-~~-~~~~~lA~~~~G~~~v~l~ 86 (431)
+..+..++|..+.+. ++++|+.|.|..+-. .+ .-.+.-++.++|+.++.+.
T Consensus 7 ~~~~l~k~A~~lV~~~~~lq~Ge~VlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v~ 61 (418)
T 1zjc_A 7 YKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVV 61 (418)
T ss_dssp HHHHHHHHHHHHHHTTTCCCTTCCEEEEEETTCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred hHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEEE
Confidence 567888899999885 689999999998764 33 3445567788999877653
No 120
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=32.99 E-value=1.1e+02 Score=26.75 Aligned_cols=78 Identities=9% Similarity=0.078 Sum_probs=49.5
Q ss_pred CcccHHHHHHHHHH---HHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceE
Q 014065 29 FDLTYSRIHELVER---AASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 29 ~~~Ty~el~~~~~~---~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
..+++.+....... .-+.|...++++|++|+|...-++-.+++.+|- ..|+.++.+.. +.+.+. ++++.+++.
T Consensus 138 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~ 213 (340)
T 3s2e_A 138 DKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR-AMGLRVAAVDI--DDAKLN-LARRLGAEV 213 (340)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHH-HTTCEEEEEES--CHHHHH-HHHHTTCSE
T ss_pred CCCCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeC--CHHHHH-HHHHcCCCE
Confidence 36777775532222 123455568999999999987666777766666 46887666543 344433 567778888
Q ss_pred EEecC
Q 014065 106 LLTPA 110 (431)
Q Consensus 106 ii~~~ 110 (431)
++...
T Consensus 214 ~i~~~ 218 (340)
T 3s2e_A 214 AVNAR 218 (340)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 77543
No 121
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=32.76 E-value=1.6e+02 Score=25.46 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=38.8
Q ss_pred HHcCCCCCCEEEEECCCc-HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 48 VAAGINAGDVVALTFPNT-VEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 48 ~~~gl~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+..++++|++|+|....+ +-..++.+| ...|+.++.+.. +.+.+..+.+..++..++.
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~--~~~~~~~~~~~~g~~~~~~ 201 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIA-RLKGCRVVGIAG--GAEKCRFLVEELGFDGAID 201 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEES--SHHHHHHHHHTTCCSEEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeC--CHHHHHHHHHHcCCCEEEE
Confidence 345899999999999855 555555444 567887665533 3555555557778877664
No 122
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=32.36 E-value=1.6e+02 Score=26.87 Aligned_cols=75 Identities=13% Similarity=0.128 Sum_probs=45.6
Q ss_pred cccHHHHHHHHHHHHH---HHH---HcCCCCCCEEEEECCCc-HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCC
Q 014065 30 DLTYSRIHELVERAAS---RLV---AAGINAGDVVALTFPNT-VEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSE 102 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~---~L~---~~gl~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 102 (431)
.+++.+.......++. .|. ..++++|++|+|....+ +-..++.+| ...|+..+.+.. +.+.+. .+++.+
T Consensus 190 ~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla-~~~Ga~vi~~~~--~~~~~~-~~~~lG 265 (447)
T 4a0s_A 190 HLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFV-KNGGGIPVAVVS--SAQKEA-AVRALG 265 (447)
T ss_dssp TSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHH-HHTTCEEEEEES--SHHHHH-HHHHTT
T ss_pred CCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeC--CHHHHH-HHHhcC
Confidence 6788776543333222 232 25799999999999854 555555554 467887666542 444444 446677
Q ss_pred ceEEEe
Q 014065 103 SKLLLT 108 (431)
Q Consensus 103 ~~~ii~ 108 (431)
+..++.
T Consensus 266 a~~~i~ 271 (447)
T 4a0s_A 266 CDLVIN 271 (447)
T ss_dssp CCCEEE
T ss_pred CCEEEe
Confidence 777664
No 123
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=31.74 E-value=63 Score=21.64 Aligned_cols=47 Identities=17% Similarity=0.145 Sum_probs=30.6
Q ss_pred cccHHHHHHHHHHhcCCcc-------------eEEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC
Q 014065 3 GVTLIGLLNQVIDQFSSKR-------------ALSVSGKFDLTYSRIHELVERAASRLVAAGINAGDVVALTFPN 64 (431)
Q Consensus 3 ~~tl~~~l~~~a~~~p~~~-------------a~~~~~~~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n 64 (431)
..|+.++++....++|.-. ..+.-|++.+.. +.-+++||.|+++-|-
T Consensus 27 ~~Tv~~ll~~L~~~~p~~~~~~l~~~g~l~~~~~v~VN~~~v~~---------------~~~l~~gDeV~i~Ppv 86 (89)
T 3po0_A 27 DATVGDALDALVGAHPALESRVFGDDGELYDHINVLRNGEAAAL---------------GEATAAGDELALFPPV 86 (89)
T ss_dssp TCBHHHHHHHHHHHCGGGHHHHBCTTSCBCTTSEEEETTEECCT---------------TSBCCTTCEEEEECCC
T ss_pred CCcHHHHHHHHHHHCcHHHHHHhccCCcccccEEEEECCEECCC---------------CcccCCCCEEEEECCC
Confidence 5688999988888887421 223334444432 3458899999998663
No 124
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=30.88 E-value=2.9e+02 Score=24.72 Aligned_cols=60 Identities=8% Similarity=-0.113 Sum_probs=42.8
Q ss_pred CCC-EEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchh
Q 014065 54 AGD-VVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNA 114 (431)
Q Consensus 54 ~gd-~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 114 (431)
+.+ .|.. ...+-.-..+.++|.+.|..++.+-|......-...++..++++++++....+
T Consensus 110 ~~~~~vv~-aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~~~ 170 (398)
T 4d9i_A 110 GEKMTFAT-TTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDD 170 (398)
T ss_dssp SCCCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSSCHHH
T ss_pred cCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 344 4443 55566667777888888997776666656666777889999999999876433
No 125
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=30.68 E-value=1.2e+02 Score=26.83 Aligned_cols=79 Identities=14% Similarity=0.014 Sum_probs=46.8
Q ss_pred cccHHHHHHHH--HHHH-HHHHHc-CCCCC-CEEEEECC-CcHHHHHHHHHHHHhCcEEEecC-CCCCHHHHHHHHhcCC
Q 014065 30 DLTYSRIHELV--ERAA-SRLVAA-GINAG-DVVALTFP-NTVEFVIMFLAVIRARATAAPLN-AAYTPDEFEFYLSDSE 102 (431)
Q Consensus 30 ~~Ty~el~~~~--~~~a-~~L~~~-gl~~g-d~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~-~~~~~~~l~~~l~~~~ 102 (431)
.+++.+..... -..| +.|.+. ++++| ++|+|... -.+-.+++.+|- ..|+..+.+. .....++....++..+
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak-~~Ga~vi~~~~~~~~~~~~~~~~~~lG 216 (364)
T 1gu7_A 138 GLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGK-LLNFNSISVIRDRPNLDEVVASLKELG 216 (364)
T ss_dssp CCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHH-HHTCEEEEEECCCTTHHHHHHHHHHHT
T ss_pred CCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHH-HCCCEEEEEecCccccHHHHHHHHhcC
Confidence 57877654322 1222 334443 79999 99999987 456666666665 4688655553 3322233334456778
Q ss_pred ceEEEec
Q 014065 103 SKLLLTP 109 (431)
Q Consensus 103 ~~~ii~~ 109 (431)
++.++..
T Consensus 217 a~~vi~~ 223 (364)
T 1gu7_A 217 ATQVITE 223 (364)
T ss_dssp CSEEEEH
T ss_pred CeEEEec
Confidence 8877743
No 126
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=30.43 E-value=1.3e+02 Score=25.92 Aligned_cols=58 Identities=10% Similarity=-0.066 Sum_probs=40.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch
Q 014065 55 GDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN 113 (431)
Q Consensus 55 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 113 (431)
++.|... ..+-.-..+.++|.+.|..++.+-|..........++..++++++++....
T Consensus 54 ~~~vv~~-ssGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~ 111 (318)
T 2rkb_A 54 CRHLVCS-SGGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWD 111 (318)
T ss_dssp CCEEEEC-CCSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSSHH
T ss_pred CCEEEEE-CCchHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHhcCCEEEEECCCHH
Confidence 3444444 346666667788889998776665554555667788889999999886543
No 127
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=30.17 E-value=2e+02 Score=30.79 Aligned_cols=80 Identities=13% Similarity=0.108 Sum_probs=61.2
Q ss_pred eechHHHHHHHHHHHH---HhcCCCCCeEEEecChhhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceee
Q 014065 180 PLTQNNLAASVSNIKS---VYKLTESDSTVIVLPLFHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWY 256 (431)
Q Consensus 180 ~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (431)
.+|...+...+..+.. ..+..+++++...++-+. .++..+++.+..|+..+-.++ ....+.+...++..++..+
T Consensus 489 ~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~--~~vv~~lailkaG~~~vpldp-~~p~~rl~~il~~~~~~~v 565 (1304)
T 2vsq_A 489 TLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSL--ELVIGILGVLKAGAAYLPVDP-KLPEDRISYMLADSAAACL 565 (1304)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSH--HHHHHHHHHHHTTCEEEECCT-TSCHHHHHHHHHHHTCCEE
T ss_pred eEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCH--HHHHHHHHHHHHCCEEEEECC-CCHHHHHHHHHHHcCCCEE
Confidence 5888888766665544 457889999988887543 445668999999999987764 5678888888999999888
Q ss_pred ecchHH
Q 014065 257 TAVPTI 262 (431)
Q Consensus 257 ~~~p~~ 262 (431)
...+..
T Consensus 566 l~~~~~ 571 (1304)
T 2vsq_A 566 LTHQEM 571 (1304)
T ss_dssp EECSTT
T ss_pred EECcch
Confidence 876544
No 128
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=30.16 E-value=1.5e+02 Score=26.23 Aligned_cols=59 Identities=15% Similarity=0.229 Sum_probs=37.3
Q ss_pred HcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC----CCHHHHHHHHhcC--CceEEEecC
Q 014065 49 AAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA----YTPDEFEFYLSDS--ESKLLLTPA 110 (431)
Q Consensus 49 ~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~--~~~~ii~~~ 110 (431)
..++++||.|.+..+...... .++...|+.++.++.. ...+.+...++.. ++++|++..
T Consensus 66 ~l~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~ 130 (394)
T 1o69_A 66 VAGVKQDDIVLASSFTFIASV---APICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH 130 (394)
T ss_dssp HTTCCTTCEEEEESSSCGGGT---HHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred HcCCCCCCEEEECCCccHHHH---HHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC
Confidence 335688999888877655443 3344578776666532 3567888887753 456666543
No 129
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=29.58 E-value=1.9e+02 Score=25.27 Aligned_cols=57 Identities=18% Similarity=0.136 Sum_probs=32.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHH-HHHhCcEEEecCCC------CCHHHHHHHHhcCCceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIMFLA-VIRARATAAPLNAA------YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l~~~------~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+++||.|.+..+........+.. +...|+.++.++.. ...+.+...++. ++++|++.
T Consensus 98 ~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 161 (390)
T 1elu_A 98 WHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP-KTRLVILS 161 (390)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT-TEEEEEEE
T ss_pred CCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC-CceEEEEe
Confidence 56888888877766655543332 33457666655432 234556655543 45565554
No 130
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=29.38 E-value=1.4e+02 Score=24.82 Aligned_cols=74 Identities=9% Similarity=0.065 Sum_probs=44.4
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhC----cEEEecCCCCC--HHHHHHHHhcCCce
Q 014065 31 LTYSRIHELVERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRAR----ATAAPLNAAYT--PDEFEFYLSDSESK 104 (431)
Q Consensus 31 ~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G----~~~v~l~~~~~--~~~l~~~l~~~~~~ 104 (431)
+.+.++. +++..+|++. .++.|++.+.-+.|+.++..-|.+++ ...+.++...+ .+....+.+..++.
T Consensus 4 ~~~~~~~---~~l~~~i~~~---~~~~vvv~lSGGiDSs~~~~l~~~~~g~~~v~av~~~~~~~~~~~~a~~~a~~lgi~ 77 (257)
T 2e18_A 4 LDYDKVI---ERILEFIREK---GNNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFENKDVEDAKLVAEKLGIG 77 (257)
T ss_dssp ECHHHHH---HHHHHHHHHH---CTTCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCSTHHHHHHHHHHHHTCE
T ss_pred CCHHHHH---HHHHHHHHHh---CCCcEEEEecCCHHHHHHHHHHHHhcCCCcEEEEEeCCCCchHHHHHHHHHHHhCCC
Confidence 3444444 4555666665 35678999999999887776666654 34455554333 22345555666666
Q ss_pred EEEecC
Q 014065 105 LLLTPA 110 (431)
Q Consensus 105 ~ii~~~ 110 (431)
+.+++-
T Consensus 78 ~~~i~i 83 (257)
T 2e18_A 78 YKVINI 83 (257)
T ss_dssp EEECCC
T ss_pred EEEEEC
Confidence 666543
No 131
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=29.23 E-value=3.2e+02 Score=24.99 Aligned_cols=58 Identities=7% Similarity=-0.192 Sum_probs=40.9
Q ss_pred EEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCchhH
Q 014065 58 VALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGNAA 115 (431)
Q Consensus 58 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 115 (431)
..+....+-.-..+.++|.+.|..++.+=|......-...++..++++++++....+.
T Consensus 162 ~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~~~~~a 219 (442)
T 3ss7_X 162 SIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVA 219 (442)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESSCHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHH
Confidence 4444555666667777888899877666555555556777889999999998764333
No 132
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=29.22 E-value=1e+02 Score=23.00 Aligned_cols=21 Identities=24% Similarity=0.284 Sum_probs=14.0
Q ss_pred CCcccHHHHHHHHHHhcCCcceEEec
Q 014065 1 MEGVTLIGLLNQVIDQFSSKRALSVS 26 (431)
Q Consensus 1 m~~~tl~~~l~~~a~~~p~~~a~~~~ 26 (431)
|.+..+..+|. +|.++|++-.
T Consensus 1 m~~~~l~~ll~-----~p~~IavIGa 21 (145)
T 2duw_A 1 MKENDIAGILT-----STRTIALVGA 21 (145)
T ss_dssp CCCCSHHHHHH-----HCCCEEEESC
T ss_pred CCHHHHHHHHh-----CCCEEEEECc
Confidence 55666666663 3888998843
No 133
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=29.11 E-value=41 Score=28.44 Aligned_cols=24 Identities=17% Similarity=0.195 Sum_probs=20.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCC
Q 014065 41 ERAASRLVAAGINAGDVVALTFPN 64 (431)
Q Consensus 41 ~~~a~~L~~~gl~~gd~V~i~~~n 64 (431)
..+.+.|++.|+++||.|.+...-
T Consensus 18 ~~l~~~L~~LGi~~Gd~llVHsSl 41 (268)
T 3ijw_A 18 KTITNDLRKLGLKKGMTVIVHSSL 41 (268)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEECT
T ss_pred HHHHHHHHHcCCCCCCEEEEEech
Confidence 456778999999999999999764
No 134
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=28.82 E-value=1.6e+02 Score=21.14 Aligned_cols=52 Identities=12% Similarity=0.124 Sum_probs=38.1
Q ss_pred HHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEec--CCCCCHHHH
Q 014065 43 AASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPL--NAAYTPDEF 94 (431)
Q Consensus 43 ~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l 94 (431)
.+.+|.+.|+.++..+.+...+..+.+.++==++++|...+.+ -+..+..+.
T Consensus 46 ~~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~aVl~wl~~l~~~~~ 99 (119)
T 1ofu_X 46 THEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWLEPLSRAAR 99 (119)
T ss_dssp CHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEEEEEECCSSCCHHHH
T ss_pred CHHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCccEEEECCCcCChHHH
Confidence 3567778899888888888888889999999999998744444 245555443
No 135
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=28.69 E-value=2.6e+02 Score=24.56 Aligned_cols=55 Identities=11% Similarity=0.098 Sum_probs=35.9
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHhcCCceEEEec
Q 014065 51 GINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-----YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 109 (431)
++++||.|.+..+....... ++...|+.++.++.+ ...+.+...++. +.++|++.
T Consensus 76 ~~~~g~~Vi~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 135 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWSTTYY---PLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-STKAILTV 135 (390)
T ss_dssp SCCTTCEEEEESSSCHHHHH---HHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCcCEEEECCCCcHHHHH---HHHHcCCEEEEEecCccccCcCHHHHHHHhCc-CCeEEEEE
Confidence 67899998888776555443 455678766555432 356778877764 56666653
No 136
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=28.52 E-value=1.9e+02 Score=25.50 Aligned_cols=61 Identities=16% Similarity=0.179 Sum_probs=39.9
Q ss_pred HHHHHcCCC-CCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 45 SRLVAAGIN-AGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 45 ~~L~~~gl~-~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+.|.+.+++ +|++|+|...-.+-..++.+|- ..|+.++.+.. +.+.+....+..+++.++.
T Consensus 177 ~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~-~~Ga~Vi~~~~--~~~~~~~~~~~lGa~~v~~ 238 (366)
T 1yqd_A 177 SPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAK-AFGSKVTVIST--SPSKKEEALKNFGADSFLV 238 (366)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CGGGHHHHHHTSCCSEEEE
T ss_pred HHHHhcCcCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHhcCCceEEe
Confidence 345556888 9999999987556666666655 56886555543 3444555555777777664
No 137
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=28.51 E-value=2.5e+02 Score=25.85 Aligned_cols=70 Identities=6% Similarity=0.100 Sum_probs=50.9
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCCcHHHHHHHHHHHH----hC--cEEEecCCCCC-H------HHHHHHHhcCCceEEE
Q 014065 42 RAASRLVAAG-INAGDVVALTFPNTVEFVIMFLAVIR----AR--ATAAPLNAAYT-P------DEFEFYLSDSESKLLL 107 (431)
Q Consensus 42 ~~a~~L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~----~G--~~~v~l~~~~~-~------~~l~~~l~~~~~~~ii 107 (431)
++.+.+.+.+ +.++++|++.+.-+.|+.+++..+.. .| ..++.++..+. . +.+..+.+..+..+.+
T Consensus 4 kv~~~i~~~~l~~~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v 83 (464)
T 3a2k_A 4 KVRAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCET 83 (464)
T ss_dssp HHHHHHHHTCSSSCSSBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCCCCCCEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEE
Confidence 4556666655 57899999999999999998888776 34 56677777765 2 2356677778887777
Q ss_pred ecCC
Q 014065 108 TPAE 111 (431)
Q Consensus 108 ~~~~ 111 (431)
.+-+
T Consensus 84 ~~~~ 87 (464)
T 3a2k_A 84 AQID 87 (464)
T ss_dssp EECC
T ss_pred EEec
Confidence 6543
No 138
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=28.29 E-value=3.1e+02 Score=24.13 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=38.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcC---CceEEEecC
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDS---ESKLLLTPA 110 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~---~~~~ii~~~ 110 (431)
+++||.|++-.+....+. -++...|+.+++++. ...+.+...++.. +++++++..
T Consensus 124 ~~~gd~V~~~~p~~~~~~---~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 124 MGRNDYILLDERDHASII---DGSRLSFSKVIKYGH-NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp SCTTCEEEEETTCCHHHH---HHHHHSSSEEEEECT-TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred hCCCCEEEECCccCHHHH---HHHHHcCCceEEeCC-CCHHHHHHHHHhhccCCceEEEEeC
Confidence 468999888877665543 345567888887765 5678888888765 567777654
No 139
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=28.25 E-value=1.8e+02 Score=25.33 Aligned_cols=56 Identities=7% Similarity=0.033 Sum_probs=26.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC----CCHHHHHHHHhcCCceEEEec
Q 014065 53 NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA----YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 53 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii~~ 109 (431)
++||.|.+..+..+.+......+.+.|+.++.++.+ .+.+.+...++. +.+++++.
T Consensus 86 ~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 145 (382)
T 4hvk_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQ 145 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECC
T ss_pred CCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc-CceEEEEE
Confidence 456666666555554444333333455554444322 244555555543 34444443
No 140
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=27.81 E-value=1.5e+02 Score=26.42 Aligned_cols=58 Identities=9% Similarity=-0.119 Sum_probs=40.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCCch
Q 014065 55 GDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAEGN 113 (431)
Q Consensus 55 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 113 (431)
++.|... ..+-.-..+.++|.+.|..++.+-|......-...++..++++++++....
T Consensus 93 ~~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 150 (372)
T 1p5j_A 93 CAHFVCS-SAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELLD 150 (372)
T ss_dssp CCEEEEC-CSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSCHH
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECCCHH
Confidence 3444443 346666667778889998777665555555667788889999999887543
No 141
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=27.33 E-value=2.1e+02 Score=25.29 Aligned_cols=57 Identities=14% Similarity=0.188 Sum_probs=27.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecC--CC--CCHHHHHHHHhcCCceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLN--AA--YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~~--~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+++||.|.+..+...... ..-++...|+.++.++ +. ...+.+...++..++++|+..
T Consensus 83 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 143 (416)
T 3isl_A 83 IEPEDDVLIPIYGRFGYL-LTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMV 143 (416)
T ss_dssp CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEecCCcccHH-HHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEE
Confidence 456777666655433211 2223444565444433 22 245666666654344555444
No 142
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=27.26 E-value=1.2e+02 Score=26.50 Aligned_cols=76 Identities=11% Similarity=-0.008 Sum_probs=46.5
Q ss_pred cccHHHHHHHHH---HHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc-EEEecCCCCCHHHHHHHHhcCCceE
Q 014065 30 DLTYSRIHELVE---RAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA-TAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 30 ~~Ty~el~~~~~---~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
.+++.+...... -..+.+...++++|++|+|...-.+-.+++.+|- ..|+ .++.+..+ .+. ..++++.+++.
T Consensus 139 ~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~~--~~~-~~~~~~lGa~~ 214 (352)
T 3fpc_A 139 EIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGAN-HLGAGRIFAVGSR--KHC-CDIALEYGATD 214 (352)
T ss_dssp TSCHHHHTTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHH-TTTCSSEEEECCC--HHH-HHHHHHHTCCE
T ss_pred CCCHHHHhhccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEECCC--HHH-HHHHHHhCCce
Confidence 567776543211 1123455668999999999986555666666654 5787 55555433 333 34556677877
Q ss_pred EEec
Q 014065 106 LLTP 109 (431)
Q Consensus 106 ii~~ 109 (431)
++..
T Consensus 215 vi~~ 218 (352)
T 3fpc_A 215 IINY 218 (352)
T ss_dssp EECG
T ss_pred EEcC
Confidence 7743
No 143
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=27.17 E-value=1.4e+02 Score=26.20 Aligned_cols=12 Identities=8% Similarity=0.180 Sum_probs=5.4
Q ss_pred CCCEEEEECCCc
Q 014065 54 AGDVVALTFPNT 65 (431)
Q Consensus 54 ~gd~V~i~~~n~ 65 (431)
+||.|.+..+..
T Consensus 87 ~gd~Vl~~~~~~ 98 (382)
T 4eb5_A 87 KGKHILVSAVEH 98 (382)
T ss_dssp GCCEEEEETTCC
T ss_pred CCCEEEECCCcc
Confidence 445544444433
No 144
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=27.10 E-value=1.9e+02 Score=22.24 Aligned_cols=37 Identities=16% Similarity=0.206 Sum_probs=19.5
Q ss_pred HHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc
Q 014065 44 ASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA 80 (431)
Q Consensus 44 a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 80 (431)
+.+|.+.|+.+...+.+...+..+.+.++==|+++|.
T Consensus 89 ~~~L~~~Gl~~~rll~v~~~~~~daLwa~EqALrsG~ 125 (161)
T 1oft_A 89 HEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGR 125 (161)
T ss_dssp HHHHHHTTCCGGGEEEECCSSTTHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCHHHEEEEECCChHHHHHHHHHHHhcCC
Confidence 3444455555555555555555555555555555554
No 145
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=27.03 E-value=47 Score=28.36 Aligned_cols=29 Identities=31% Similarity=0.344 Sum_probs=22.4
Q ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCC
Q 014065 29 FDLTYSRIHELVERAASRLVAAGINAGDVVALTFPN 64 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~a~~L~~~gl~~gd~V~i~~~n 64 (431)
..+|-.+| ...|++.|+++||.|.+...-
T Consensus 20 ~~~T~~~L-------~~~L~~LGI~~Gd~llVHsSL 48 (286)
T 3sma_A 20 ELVTRDRL-------ASDLAALGVRPGGVLLVHASL 48 (286)
T ss_dssp CEECHHHH-------HHHHHHHTCCTTCEEEEEECS
T ss_pred CCcCHHHH-------HHHHHHcCCCCCCEEEEEech
Confidence 45666554 567888999999999998753
No 146
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=26.99 E-value=47 Score=28.23 Aligned_cols=23 Identities=22% Similarity=0.215 Sum_probs=19.3
Q ss_pred HHHHHHHHcCCCCCCEEEEECCC
Q 014065 42 RAASRLVAAGINAGDVVALTFPN 64 (431)
Q Consensus 42 ~~a~~L~~~gl~~gd~V~i~~~n 64 (431)
.+...|++.|+++||.|.+...=
T Consensus 17 ~L~~~L~~LGI~~Gd~llVHsSl 39 (273)
T 2nyg_A 17 SITEDLKALGLKKGMTVLVHSSL 39 (273)
T ss_dssp HHHHHHHHHTCCTTCEEEEEECS
T ss_pred HHHHHHHHcCCCCCCEEEEEech
Confidence 35678889999999999998753
No 147
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=26.68 E-value=1.5e+02 Score=26.05 Aligned_cols=53 Identities=8% Similarity=-0.221 Sum_probs=36.9
Q ss_pred EECCCcHHHHHHHHHHHHhCcEEEecCCCC-CHHHHHHHHhcCCceEEEecCCc
Q 014065 60 LTFPNTVEFVIMFLAVIRARATAAPLNAAY-TPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 60 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
+....+-.-..+.++|.+.|..++.+-|.. ....-...++..++++++++...
T Consensus 81 v~~SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~~~ 134 (351)
T 3aey_A 81 ACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNF 134 (351)
T ss_dssp EESCSSHHHHHHHHHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEESCH
T ss_pred EEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 334455555666688899999877665543 34445567888999999998763
No 148
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=26.54 E-value=1.2e+02 Score=22.41 Aligned_cols=48 Identities=13% Similarity=0.155 Sum_probs=23.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCce
Q 014065 56 DVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESK 104 (431)
Q Consensus 56 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 104 (431)
|.|.++.| .....-++..|..+|...+.+.+..-.+++....++.+.+
T Consensus 71 Dlvii~vp-~~~v~~v~~~~~~~g~~~i~~~~~~~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 71 DVIVFVVP-PKVGLQVAKEAVEAGFKKLWFQPGAESEEIRRFLEKAGVE 118 (138)
T ss_dssp CEEEECSC-HHHHHHHHHHHHHTTCCEEEECTTSCCHHHHHHHHHHTCE
T ss_pred CEEEEEeC-HHHHHHHHHHHHHcCCCEEEEcCccHHHHHHHHHHHCCCE
Confidence 44444444 3333344445555565555554444445555555555544
No 149
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=26.38 E-value=1.8e+02 Score=25.71 Aligned_cols=51 Identities=12% Similarity=-0.176 Sum_probs=36.4
Q ss_pred CCCcHHHHHHHHHHHHhCcEEEecCCCC-CHHHHHHHHhcCCceEEEecCCc
Q 014065 62 FPNTVEFVIMFLAVIRARATAAPLNAAY-TPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 62 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
...+-.-..+.++|.+.|..++.+-|.. ....-...++..++++++++...
T Consensus 91 aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~~ 142 (360)
T 2d1f_A 91 ASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDGNF 142 (360)
T ss_dssp CCSSHHHHHHHHHHHHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSSCH
T ss_pred eCCcHHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 3445555666688899999877766654 44455568888999999988763
No 150
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=26.31 E-value=1.6e+02 Score=26.32 Aligned_cols=59 Identities=22% Similarity=0.288 Sum_probs=34.8
Q ss_pred HHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHhcCCceEEEec
Q 014065 47 LVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-----YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 47 L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+...++++||.|.+..+...... .++...|+.++.++.+ .+.+.+...++. +.++|+..
T Consensus 74 ~~~~~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 137 (418)
T 2c81_A 74 LEALGIGEGDEVIVPSLTWIATA---TAVLNVNALPVFVDVEADTYCIDPQLIKSAITD-KTKAIIPV 137 (418)
T ss_dssp HHHTTCCTTCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT-TEEEECCB
T ss_pred HHHcCCCCcCEEEECCCccHhHH---HHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC-CCeEEEEe
Confidence 33345678888887776654443 3445677766655432 256667666653 45666654
No 151
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=26.05 E-value=3.1e+02 Score=23.78 Aligned_cols=54 Identities=15% Similarity=0.076 Sum_probs=35.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-------CCHHHHHHHHhcCCceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-------YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+++||.|.+..+.-..+. .++...|+.++.++.. ...+.+...+ ..+++++++.
T Consensus 103 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~i~ 163 (383)
T 3kax_A 103 TKENESVLVQPPIYPPFF---EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQF-QQGVKLMLLC 163 (383)
T ss_dssp CCTTCEEEECSSCCHHHH---HHHHHTTCEEEECCCEEETTEEECCHHHHHHHH-TTTCCEEEEE
T ss_pred CCCCCEEEEcCCCcHHHH---HHHHHcCCEEEeccceecCCcEEEcHHHHHHHh-CcCCeEEEEe
Confidence 468888887776655433 4456678877777642 5677888887 4456666543
No 152
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=25.81 E-value=2.2e+02 Score=24.71 Aligned_cols=74 Identities=14% Similarity=0.195 Sum_probs=45.3
Q ss_pred cccHHHHHHHHHH---HHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE
Q 014065 30 DLTYSRIHELVER---AASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL 106 (431)
Q Consensus 30 ~~Ty~el~~~~~~---~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 106 (431)
.+++.+....... .-+.|.+.++++|++|++....++-..++.+|. ..|+.++.+.. +.+.+. .++..+++.+
T Consensus 137 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~~ 212 (339)
T 1rjw_A 137 NLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK-AMGLNVVAVDI--GDEKLE-LAKELGADLV 212 (339)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHH-HTTCEEEEECS--CHHHHH-HHHHTTCSEE
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHHH-HHHHCCCCEE
Confidence 5777764322111 123445558999999999988666666666665 46887665543 344443 3455677766
Q ss_pred E
Q 014065 107 L 107 (431)
Q Consensus 107 i 107 (431)
+
T Consensus 213 ~ 213 (339)
T 1rjw_A 213 V 213 (339)
T ss_dssp E
T ss_pred e
Confidence 5
No 153
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=25.57 E-value=3.5e+02 Score=23.88 Aligned_cols=76 Identities=12% Similarity=0.081 Sum_probs=44.8
Q ss_pred cccHHHHHHHHHHHH---HHHHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCc-EEEecCCCCCHHHHHHHHhcCCce
Q 014065 30 DLTYSRIHELVERAA---SRLVAAG-INAGDVVALTFPNTVEFVIMFLAVIRARA-TAAPLNAAYTPDEFEFYLSDSESK 104 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a---~~L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~ 104 (431)
.+++.|.......++ ..|...+ +++|++|+|...-.+-..++.+|- ..|+ .++.+.. +.+.+ ..+++.+++
T Consensus 167 ~l~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~~-~~~~~lGa~ 242 (380)
T 1vj0_A 167 KDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIAR-SLGAENVIVIAG--SPNRL-KLAEEIGAD 242 (380)
T ss_dssp TSCHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHH-HTTBSEEEEEES--CHHHH-HHHHHTTCS
T ss_pred CCChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHH-HcCCceEEEEcC--CHHHH-HHHHHcCCc
Confidence 577763332222222 3344457 999999999995455666666655 4684 5555543 23333 345577888
Q ss_pred EEEec
Q 014065 105 LLLTP 109 (431)
Q Consensus 105 ~ii~~ 109 (431)
.++..
T Consensus 243 ~vi~~ 247 (380)
T 1vj0_A 243 LTLNR 247 (380)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 77753
No 154
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=25.39 E-value=3.4e+02 Score=23.72 Aligned_cols=76 Identities=14% Similarity=0.069 Sum_probs=46.6
Q ss_pred CcccHHHHHHHHHHH--H-HHH-HHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCce
Q 014065 29 FDLTYSRIHELVERA--A-SRL-VAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESK 104 (431)
Q Consensus 29 ~~~Ty~el~~~~~~~--a-~~L-~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 104 (431)
..+++.+........ | ..| ...++++|++|+|...-.+-..++.+| -..|+.++.+.. +.+.+. .++..+++
T Consensus 160 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla-~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~ 235 (363)
T 3uog_A 160 KSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIA-KATGAEVIVTSS--SREKLD-RAFALGAD 235 (363)
T ss_dssp TTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHH-HHTTCEEEEEES--CHHHHH-HHHHHTCS
T ss_pred CCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEec--CchhHH-HHHHcCCC
Confidence 367888765432222 2 233 235899999999999444555555555 467887666543 334443 35667787
Q ss_pred EEEe
Q 014065 105 LLLT 108 (431)
Q Consensus 105 ~ii~ 108 (431)
.++.
T Consensus 236 ~vi~ 239 (363)
T 3uog_A 236 HGIN 239 (363)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7775
No 155
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=25.33 E-value=2.1e+02 Score=22.82 Aligned_cols=89 Identities=13% Similarity=0.044 Sum_probs=52.3
Q ss_pred eEEEecCh--hhHHHHHHHHHHHHhcCCEEEeCCCCCCChhhHHHHHHHhcceeeecch------HHHHHHHhcccCCCC
Q 014065 204 STVIVLPL--FHVHGMLAGLLSSFAAGAAVTLPAAGRFSASTFWQDMIKYNATWYTAVP------TIHQIVLDRHVAKPE 275 (431)
Q Consensus 204 ~~~~~~p~--~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p------~~~~~l~~~~~~~~~ 275 (431)
++++..+- .|..|.......--..|..++.... ..+++.+.+.++++++..+.++- ..++.+.+.......
T Consensus 90 ~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~-~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~ 168 (210)
T 1y80_A 90 KIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGV-DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGL 168 (210)
T ss_dssp EEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCS-SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTC
T ss_pred EEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCC-CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCC
Confidence 44444332 6777776633333456777764432 66899999999999988776543 234444443332210
Q ss_pred CCCCCccEEEeccCCCcHHHH
Q 014065 276 PVYPKLRFIRSCSASLAPVIL 296 (431)
Q Consensus 276 ~~~~~l~~i~~~g~~~~~~~~ 296 (431)
.+.+ .+++||...+++..
T Consensus 169 --~~~~-~v~vGG~~~~~~~~ 186 (210)
T 1y80_A 169 --RDRV-KVIVGGAPLSQDFA 186 (210)
T ss_dssp --GGGC-EEEEESTTCCHHHH
T ss_pred --CCCC-eEEEECCCCCHHHH
Confidence 1223 37788888886554
No 156
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=25.24 E-value=3.4e+02 Score=23.57 Aligned_cols=56 Identities=9% Similarity=-0.078 Sum_probs=33.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCC-C----CCHHHHHHHHhcCCceEEEec
Q 014065 53 NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNA-A----YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 53 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-~----~~~~~l~~~l~~~~~~~ii~~ 109 (431)
++||.|.+..+......+ .-++...|+.++.++. . .+.+.++..++..++++|++.
T Consensus 84 ~~gd~vlv~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 144 (385)
T 2bkw_A 84 APNKNVLVVSTGTFSDRF-ADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVT 144 (385)
T ss_dssp CSCCEEEEECSSHHHHHH-HHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEE
T ss_pred CCCCeEEEEcCCcchHHH-HHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEE
Confidence 689988777554433222 2244567877665544 2 467788888876455666654
No 157
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=25.07 E-value=2.2e+02 Score=24.94 Aligned_cols=58 Identities=14% Similarity=-0.016 Sum_probs=32.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEE--ecCCC--CCHHHHHHHHhc-CCceEEEecC
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAA--PLNAA--YTPDEFEFYLSD-SESKLLLTPA 110 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~~--~~~~~l~~~l~~-~~~~~ii~~~ 110 (431)
+++||.|.+..+...... ..-.+...|+.++ ++++. .+.+.+...++. .+++++++..
T Consensus 80 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~ 142 (392)
T 2z9v_A 80 ISPDDVVLNLASGVYGKG-FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCH 142 (392)
T ss_dssp CCTTCCEEEEESSHHHHH-HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEES
T ss_pred cCCCCEEEEecCCcccHH-HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEec
Confidence 468888877766543332 1112234566544 44432 467788888864 3566666543
No 158
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=24.89 E-value=3.8e+02 Score=24.04 Aligned_cols=55 Identities=13% Similarity=0.082 Sum_probs=32.6
Q ss_pred CCCCCEEEEECCCcHHHHHHH-HHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 52 INAGDVVALTFPNTVEFVIMF-LAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~-lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+++||.|++..+.-......+ ..+-+.|..++.++.. ..+.++..++. +.++|++
T Consensus 117 ~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~ai~~-~t~~v~l 172 (414)
T 3ndn_A 117 LGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-DLSQWERALSV-PTQAVFF 172 (414)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-CHHHHHHHTSS-CCSEEEE
T ss_pred hCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-CHHHHHHhcCC-CCeEEEE
Confidence 578888877666544433222 1234577777777655 56677777654 4556664
No 159
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=24.83 E-value=2.6e+02 Score=22.19 Aligned_cols=56 Identities=11% Similarity=0.073 Sum_probs=44.7
Q ss_pred CEEEEECCC----cHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecCC
Q 014065 56 DVVALTFPN----TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 56 d~V~i~~~n----~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
.+|.+.... .+-..++...+-..|..++.+....+.+++...++..++++|..+..
T Consensus 89 ~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~ 148 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSAL 148 (210)
T ss_dssp CEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECC
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 356665444 36666666677788999999999999999999999999999998764
No 160
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=24.68 E-value=2.5e+02 Score=24.39 Aligned_cols=58 Identities=17% Similarity=0.093 Sum_probs=34.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC----CCHHHHHHHHhcCCceEEEecC
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA----YTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
+++||.|.+..+..... ...-.+...|+.++.++.+ ...+.+...++..+++++++..
T Consensus 74 ~~~gd~vi~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 135 (384)
T 3zrp_A 74 LKPNDKILVVSNGVFGD-RWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTH 135 (384)
T ss_dssp CCTTCEEEEECSSHHHH-HHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEES
T ss_pred cCCCCEEEEecCCcchH-HHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeC
Confidence 57888887776543221 1122234567666555433 4677888888876677776653
No 161
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=24.51 E-value=1.6e+02 Score=25.91 Aligned_cols=53 Identities=11% Similarity=-0.216 Sum_probs=36.9
Q ss_pred EECCCcHHHHHHHHHHHHhCcEEEecCCCC-CHHHHHHHHhcCCceEEEecCCc
Q 014065 60 LTFPNTVEFVIMFLAVIRARATAAPLNAAY-TPDEFEFYLSDSESKLLLTPAEG 112 (431)
Q Consensus 60 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~~~ 112 (431)
+....+-.-..+.++|.+.|..++.+-|.. ....-...++..++++++++...
T Consensus 83 v~~SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~~ 136 (352)
T 2zsj_A 83 ICASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQGTF 136 (352)
T ss_dssp EECCSSHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESSCH
T ss_pred EEeCCchHHHHHHHHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 334455555666688899999877665553 33445568888999999998753
No 162
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=24.50 E-value=3.2e+02 Score=23.77 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=42.9
Q ss_pred cccHHHHHHHHHHHHHH---H-HHcCCCCCCEEEEECCCc-HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCce
Q 014065 30 DLTYSRIHELVERAASR---L-VAAGINAGDVVALTFPNT-VEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESK 104 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~---L-~~~gl~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 104 (431)
.+++.+.......++.. | ...++++|++|+|....+ +-..++.++ ...|+.++.+.. +.+.+... +..+++
T Consensus 134 ~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a-~~~Ga~Vi~~~~--~~~~~~~~-~~~g~~ 209 (354)
T 2j8z_A 134 GLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLT-RMAGAIPLVTAG--SQKKLQMA-EKLGAA 209 (354)
T ss_dssp TCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEES--CHHHHHHH-HHHTCS
T ss_pred CCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHH-HHcCCEEEEEeC--CHHHHHHH-HHcCCc
Confidence 67887754333333332 3 234899999999998554 555555444 457887665543 34444433 455666
Q ss_pred EEE
Q 014065 105 LLL 107 (431)
Q Consensus 105 ~ii 107 (431)
.++
T Consensus 210 ~~~ 212 (354)
T 2j8z_A 210 AGF 212 (354)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 163
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=24.33 E-value=2e+02 Score=24.90 Aligned_cols=61 Identities=8% Similarity=-0.081 Sum_probs=37.8
Q ss_pred CCCCCCEEEEECCCcH---HHHHHHHHH-HHhCcEEEecCCCC------------CHHHHHHHHhcCCceEEEecCC
Q 014065 51 GINAGDVVALTFPNTV---EFVIMFLAV-IRARATAAPLNAAY------------TPDEFEFYLSDSESKLLLTPAE 111 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~---~~~~~~lA~-~~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~ii~~~~ 111 (431)
-+++||+|++++|.+. +.+-..... -..|..++.-+... ..+++...+.+-++++|++...
T Consensus 13 ~L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 89 (311)
T 1zl0_A 13 WQPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRG 89 (311)
T ss_dssp CCCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCC
T ss_pred cCCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccC
Confidence 4789999999999762 222222222 23576665432111 2346777888889999998864
No 164
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=24.29 E-value=3.4e+02 Score=23.31 Aligned_cols=71 Identities=10% Similarity=0.174 Sum_probs=48.2
Q ss_pred HHHHHHHHHHcC-CCCCCEEEEECCCcHHHHHHHHHHHHh----C---cEEEecCCCCC---H---HHHHHHHhcCCceE
Q 014065 40 VERAASRLVAAG-INAGDVVALTFPNTVEFVIMFLAVIRA----R---ATAAPLNAAYT---P---DEFEFYLSDSESKL 105 (431)
Q Consensus 40 ~~~~a~~L~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~----G---~~~v~l~~~~~---~---~~l~~~l~~~~~~~ 105 (431)
..++.+.+.+.+ +.++++|++.+.-+.|+.+++..+.+. | ...+.++.... . +.+..+.+..+..+
T Consensus 8 ~~~~~~~i~~~~l~~~~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~r~~s~~~~~~v~~~a~~lgi~~ 87 (317)
T 1wy5_A 8 IRKVLALQNDEKIFSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKI 87 (317)
T ss_dssp HHHHHHHHHHHCSCSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCCCcccHHHHHHHHHHHHHcCCcE
Confidence 445666666654 578899999999999999988888764 3 44566666553 1 22455566667666
Q ss_pred EEecC
Q 014065 106 LLTPA 110 (431)
Q Consensus 106 ii~~~ 110 (431)
.+.+-
T Consensus 88 ~v~~~ 92 (317)
T 1wy5_A 88 FVGKE 92 (317)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 66554
No 165
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=24.20 E-value=3.6e+02 Score=23.49 Aligned_cols=76 Identities=16% Similarity=0.074 Sum_probs=45.4
Q ss_pred cccHHHHHHHHHHHHHH---H-HHcCCCCCCEEEEECCCc-HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCce
Q 014065 30 DLTYSRIHELVERAASR---L-VAAGINAGDVVALTFPNT-VEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESK 104 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~---L-~~~gl~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 104 (431)
.+++.+.......++.. | ...++++|++|+|....+ +-..++.+| ...|+.++.+.. +.+.+. .+++.++.
T Consensus 139 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a-~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~ 214 (353)
T 4dup_A 139 GYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLA-RAFGAEVYATAG--STGKCE-ACERLGAK 214 (353)
T ss_dssp TCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEES--SHHHHH-HHHHHTCS
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHH-HHcCCEEEEEeC--CHHHHH-HHHhcCCC
Confidence 67888865443333333 3 234899999999996555 455555444 567887666543 344443 34456777
Q ss_pred EEEec
Q 014065 105 LLLTP 109 (431)
Q Consensus 105 ~ii~~ 109 (431)
.++..
T Consensus 215 ~~~~~ 219 (353)
T 4dup_A 215 RGINY 219 (353)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 66643
No 166
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=24.16 E-value=2.8e+02 Score=24.12 Aligned_cols=51 Identities=24% Similarity=0.252 Sum_probs=32.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+++||.|++..+....+. .++...|+.++.++ .+.+.+...++. +++++++
T Consensus 110 ~~~gd~vl~~~p~~~~~~---~~~~~~g~~~~~v~--~d~~~l~~~l~~-~~~~v~~ 160 (370)
T 2z61_A 110 IDDGDEVLIQNPCYPCYK---NFIRFLGAKPVFCD--FTVESLEEALSD-KTKAIII 160 (370)
T ss_dssp CCTTCEEEEESSCCTHHH---HHHHHTTCEEEEEC--SSHHHHHHHCCS-SEEEEEE
T ss_pred cCCCCEEEEeCCCchhHH---HHHHHcCCEEEEeC--CCHHHHHHhccc-CceEEEE
Confidence 357888877776654433 23456787777776 567777777754 4555554
No 167
>1fm0_D Molybdopterin convertin factor, subunit 1; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.15.3.1 PDB: 1fma_D 1jw9_D 1jwa_D* 1jwb_D* 3bii_D 1nvi_D
Probab=23.80 E-value=1e+02 Score=20.03 Aligned_cols=14 Identities=36% Similarity=0.463 Sum_probs=10.8
Q ss_pred cCCCCCCEEEEECC
Q 014065 50 AGINAGDVVALTFP 63 (431)
Q Consensus 50 ~gl~~gd~V~i~~~ 63 (431)
.-++.||.|+++-|
T Consensus 64 ~~l~~gD~V~i~Pp 77 (81)
T 1fm0_D 64 HPLTDGDEVAFFPP 77 (81)
T ss_dssp CBCCTTCEEEEECC
T ss_pred CCCCCCCEEEEeCC
Confidence 35789999998755
No 168
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=23.53 E-value=3e+02 Score=24.29 Aligned_cols=77 Identities=14% Similarity=0.065 Sum_probs=46.8
Q ss_pred cccHHHHHHHHHHHH--H-HH-HHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc-EEEecCCCCCHHHHHHHHhcCCce
Q 014065 30 DLTYSRIHELVERAA--S-RL-VAAGINAGDVVALTFPNTVEFVIMFLAVIRARA-TAAPLNAAYTPDEFEFYLSDSESK 104 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a--~-~L-~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~ 104 (431)
.+++.+.......++ . .+ +..++++|++|+|...-.+-.+++.+|- ..|+ .++.+..+-. .+ .++++.+++
T Consensus 165 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~-~~Ga~~Vi~~~~~~~--~~-~~a~~lGa~ 240 (378)
T 3uko_A 165 TAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAK-TAGASRIIGIDIDSK--KY-ETAKKFGVN 240 (378)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHH-HHTCSCEEEECSCTT--HH-HHHHTTTCC
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCCHH--HH-HHHHHcCCc
Confidence 577777554332222 2 13 3358999999999987555566665555 5687 5665644322 22 356678888
Q ss_pred EEEecC
Q 014065 105 LLLTPA 110 (431)
Q Consensus 105 ~ii~~~ 110 (431)
.++...
T Consensus 241 ~vi~~~ 246 (378)
T 3uko_A 241 EFVNPK 246 (378)
T ss_dssp EEECGG
T ss_pred EEEccc
Confidence 877543
No 169
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=23.47 E-value=3.8e+02 Score=23.70 Aligned_cols=56 Identities=13% Similarity=0.074 Sum_probs=34.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC----CCHHHHHHHHhcCCceEEEec
Q 014065 53 NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA----YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 53 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii~~ 109 (431)
++||.|.+..+....+..+...+-..|+.++.++.. ...+.+...++. +++++++.
T Consensus 111 ~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 170 (423)
T 3lvm_A 111 KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRD-DTILVSIM 170 (423)
T ss_dssp TTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCT-TEEEEECC
T ss_pred cCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCC-CcEEEEEe
Confidence 368888877776666554444445567666555432 246677777754 45666654
No 170
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=23.32 E-value=2.9e+02 Score=24.22 Aligned_cols=57 Identities=12% Similarity=0.119 Sum_probs=32.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecC--C--CCCHHHHHHHHhcCCceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLN--A--AYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~--~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+++||.|.+..+....+. ..-++...|+.++.++ + ..+.+.+...++..++++|++.
T Consensus 90 ~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 150 (396)
T 2ch1_A 90 LEEGDRVLIAVNGIWAER-AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLT 150 (396)
T ss_dssp CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCeEEEEcCCcccHH-HHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEE
Confidence 467888877766554432 1124455676555443 2 2456777777765345555543
No 171
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=23.28 E-value=1.8e+02 Score=21.50 Aligned_cols=48 Identities=13% Similarity=-0.058 Sum_probs=26.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCce
Q 014065 56 DVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESK 104 (431)
Q Consensus 56 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 104 (431)
|.|.++.|. ....-++-.|...|...+.+.+....+++....+..+.+
T Consensus 79 Dlvvi~vp~-~~~~~vv~~~~~~gi~~i~~~~g~~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 79 EVVDLFVKP-KLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLI 126 (144)
T ss_dssp SEEEECSCH-HHHHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCE
T ss_pred CEEEEEeCH-HHHHHHHHHHHHcCCCEEEECCCchHHHHHHHHHHcCCE
Confidence 344444433 333444445666666555555555566666666666655
No 172
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=22.84 E-value=2.6e+02 Score=24.38 Aligned_cols=52 Identities=17% Similarity=0.148 Sum_probs=31.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC--------CCHHHHHHHHhcCCceEEEe
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA--------YTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--------~~~~~l~~~l~~~~~~~ii~ 108 (431)
+++||.|.+..+.-..+. .++...|+.++.++.. ...+.+...++. ++++++
T Consensus 111 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i 170 (391)
T 4dq6_A 111 TKANDKIMIQEPVYSPFN---SVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFIL 170 (391)
T ss_dssp SCTTCEEEECSSCCTHHH---HHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEE
T ss_pred CCCCCEEEEcCCCCHHHH---HHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEE
Confidence 357887776665544332 3445677777666544 466778777776 555544
No 173
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=22.47 E-value=3.1e+02 Score=24.16 Aligned_cols=69 Identities=26% Similarity=0.329 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC----CCHHHHHHHHhcCCceEEEecC
Q 014065 40 VERAASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA----YTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 40 ~~~~a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
...+...+... +++||.|.+..+...... ..-++...|+.++.++.. ...+.+...++..++++|+...
T Consensus 74 t~al~~~~~~~-~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 146 (411)
T 3nnk_A 74 RAGIEAILVSA-IRPGDKVLVPVFGRFGHL-LCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQ 146 (411)
T ss_dssp HHHHHHHHHHH-CCTTCEEEEEECSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHHHh-cCCCCEEEEecCCchHHH-HHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeC
No 174
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=22.42 E-value=3.2e+02 Score=23.76 Aligned_cols=61 Identities=20% Similarity=0.192 Sum_probs=37.1
Q ss_pred HHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-----CCHHHHHHHHhcCCceEEEec
Q 014065 45 SRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-----YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 45 ~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 109 (431)
..+...++++||.|.+-.+...... .++...|+.++.++.+ .+.+.+...++. +.++|+..
T Consensus 66 ~~l~~l~~~~gd~Vi~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 131 (373)
T 3frk_A 66 LILKGYDIGFGDEVIVPSNTFIATA---LAVSYTGAKPIFVEPDIRTYNIDPSLIESAITE-KTKAIIAV 131 (373)
T ss_dssp HHHHHTTCCTTCEEEEETTSCTHHH---HHHHHHSCEEEEECEETTTTEECGGGTGGGCCT-TEEEEEEE
T ss_pred HHHHHcCCCCcCEEEECCCCcHHHH---HHHHHcCCEEEEEeccccccCcCHHHHHHhcCC-CCeEEEEE
Confidence 3344456789998888777655533 3456678776666533 145666666654 56666644
No 175
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=22.40 E-value=3.4e+02 Score=23.73 Aligned_cols=54 Identities=22% Similarity=0.308 Sum_probs=34.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCC--C-----CCHHHHHHHHhcCCceEEEe
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNA--A-----YTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~-----~~~~~l~~~l~~~~~~~ii~ 108 (431)
.++||.|++..|.-..+. .++...|+.++.++. . ...+.+...++..+++++++
T Consensus 108 ~~~gd~vl~~~p~y~~~~---~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l 168 (390)
T 1d2f_A 108 SETGEGVVIHTPAYDAFY---KAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLL 168 (390)
T ss_dssp SCTTCEEEEEESCCHHHH---HHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEE
T ss_pred cCCCCEEEEcCCCcHHHH---HHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEE
Confidence 357888888777655433 334556776555432 2 56778888887656677664
No 176
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=22.18 E-value=3.1e+02 Score=24.07 Aligned_cols=53 Identities=21% Similarity=0.216 Sum_probs=31.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCC-------CCHHHHHHHHhcCCceEEEe
Q 014065 53 NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAA-------YTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 53 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~ii~ 108 (431)
++||.|++..|.-..+. .++...|+.++.++.. ...+.+...++..++++|++
T Consensus 111 ~~gd~vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (399)
T 1c7n_A 111 KPGDGVIIITPVYYPFF---MAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLF 170 (399)
T ss_dssp CTTCEEEECSSCCTHHH---HHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEE
T ss_pred CCCCEEEEcCCCcHhHH---HHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEE
Confidence 46777777655443332 2344567766665532 45677777776455666664
No 177
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=22.03 E-value=3e+02 Score=23.94 Aligned_cols=57 Identities=19% Similarity=0.126 Sum_probs=31.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEec--CC--CCCHHHHHHHHhcCCceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIMFLAVIRARATAAPL--NA--AYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~--~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+++||.|.+..+.... ....-++...|+.++.+ ++ ....+.+...++..+++++++.
T Consensus 95 ~~~gd~vl~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 155 (393)
T 3kgw_A 95 LEPGDSFLTGTNGIWG-MRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLV 155 (393)
T ss_dssp CCTTCEEEEEESSHHH-HHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEE
T ss_pred CCCCCEEEEEeCCchh-HHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEe
Confidence 4688888777433221 11233444566655444 33 2466778887776455655554
No 178
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=21.99 E-value=2.6e+02 Score=24.62 Aligned_cols=57 Identities=19% Similarity=0.151 Sum_probs=37.0
Q ss_pred HcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc-EEEecCCCCCHHHHHHHHhcCCceEEEec
Q 014065 49 AAGINAGDVVALTFPNTVEFVIMFLAVIRARA-TAAPLNAAYTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 49 ~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 109 (431)
..++++|++|+|...-.+-.+++.+|- ..|+ .++.+..+ .+.+ .++++.+++.++..
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~--~~~~-~~a~~lGa~~vi~~ 243 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCK-AAGASRIIGVGTH--KDKF-PKAIELGATECLNP 243 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECSC--GGGH-HHHHHTTCSEEECG
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEECCC--HHHH-HHHHHcCCcEEEec
Confidence 358999999999987556666666665 4587 55555433 2222 34456788777643
No 179
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=21.88 E-value=2e+02 Score=25.44 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=28.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHH-HHHHhCcEEEecCC--C--CCHHHHHHHHhcCCceEEEec
Q 014065 52 INAGDVVALTFPNTVEFVIMFL-AVIRARATAAPLNA--A--YTPDEFEFYLSDSESKLLLTP 109 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~l-A~~~~G~~~v~l~~--~--~~~~~l~~~l~~~~~~~ii~~ 109 (431)
+++||.|.+..+........+. ++...|+.++.++. + ...+.+...++. ++++|++.
T Consensus 115 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 176 (420)
T 1t3i_A 115 LKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE-KTKLVTVV 176 (420)
T ss_dssp CCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT-TEEEEEEE
T ss_pred cCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC-CceEEEEe
Confidence 4677777766655444322222 22345655544432 2 345666666653 45555544
No 180
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=21.80 E-value=2.6e+02 Score=24.25 Aligned_cols=53 Identities=8% Similarity=0.027 Sum_probs=34.6
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHh-CcEEEecCCCCCHHHHHHHHhcCCceEEE
Q 014065 51 GINAGDVVALTFPNTVEFVIMFLAVIRA-RATAAPLNAAYTPDEFEFYLSDSESKLLL 107 (431)
Q Consensus 51 gl~~gd~V~i~~~n~~~~~~~~lA~~~~-G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 107 (431)
++ +|++|+|.....+-..++.+|-... |+.++.+.. +.+.+. .+++.+++.++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~vi 221 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISR--SKKHRD-FALELGADYVS 221 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS--CHHHHH-HHHHHTCSEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeC--CHHHHH-HHHHhCCCEEe
Confidence 78 9999999998556677777766542 776555543 334333 34456677665
No 181
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=21.79 E-value=2.9e+02 Score=24.59 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=31.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHH-HHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEe
Q 014065 52 INAGDVVALTFPNTVEFVIMFLA-VIRARATAAPLNAAYTPDEFEFYLSDSESKLLLT 108 (431)
Q Consensus 52 l~~gd~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 108 (431)
+++||.|.+..+........+.. +...|+.++.++.+ .+.++..++. +.++|++
T Consensus 92 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~i~~-~~~~v~~ 146 (412)
T 2cb1_A 92 LRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE--PEAVREALSA-KTRAVFV 146 (412)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS--HHHHHHHCCT-TEEEEEE
T ss_pred hCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC--HHHHHHHhcc-CCeEEEE
Confidence 46788877776665443333222 34567776666554 6666666654 4566665
No 182
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=21.76 E-value=3.9e+02 Score=23.12 Aligned_cols=52 Identities=6% Similarity=-0.070 Sum_probs=27.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCC--C--CCHHHHHHHHhcCCceEEE
Q 014065 53 NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNA--A--YTPDEFEFYLSDSESKLLL 107 (431)
Q Consensus 53 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~--~~~~~l~~~l~~~~~~~ii 107 (431)
.+||.|.+..+....+. -++...|+.++.++. . ...+.+...++..+.+.++
T Consensus 121 ~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~ 176 (397)
T 3f9t_A 121 NEHPKIIVPITAHFSFE---KGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGII 176 (397)
T ss_dssp CSSCEEEEETTCCTHHH---HHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEE
T ss_pred CCCeEEEECCcchhHHH---HHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEE
Confidence 35677776666544422 233334655444433 2 2566777777663444444
No 183
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=21.56 E-value=92 Score=18.65 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=17.7
Q ss_pred cHHHHHHHHHHHHHHHHHcCC
Q 014065 32 TYSRIHELVERAASRLVAAGI 52 (431)
Q Consensus 32 Ty~el~~~~~~~a~~L~~~gl 52 (431)
||+||.++...+-..|...|-
T Consensus 3 swaefkqrlaaiktrlqalgg 23 (73)
T 2a3d_A 3 SWAEFKQRLAAIKTRLQALGG 23 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHCSS
T ss_pred cHHHHHHHHHHHHHHHHHhcC
Confidence 689999999998888888763
No 184
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=21.40 E-value=2.9e+02 Score=24.55 Aligned_cols=56 Identities=16% Similarity=0.104 Sum_probs=35.6
Q ss_pred HHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc-EEEecCCCCCHHHHHHHHhcCCceE
Q 014065 46 RLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA-TAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 46 ~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
.|...++++|++|+|...-.+-.+++.+|- ..|+ .++.+.. +.+.+ .+++..+++.
T Consensus 177 al~~~~~~~g~~VlV~GaG~vG~~aiqlAk-~~Ga~~Vi~~~~--~~~~~-~~a~~lGa~~ 233 (398)
T 1kol_A 177 GAVTAGVGPGSTVYVAGAGPVGLAAAASAR-LLGAAVVIVGDL--NPARL-AHAKAQGFEI 233 (398)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHHHH-HHHHHTTCEE
T ss_pred HHHHcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCCeEEEEcC--CHHHH-HHHHHcCCcE
Confidence 344568999999999986555666666665 4687 4554433 34433 3446778873
No 185
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=21.21 E-value=2.7e+02 Score=24.44 Aligned_cols=56 Identities=18% Similarity=0.293 Sum_probs=34.3
Q ss_pred HHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCC--C---CCHHHHHHHHhcCCceEEE
Q 014065 48 VAAGINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNA--A---YTPDEFEFYLSDSESKLLL 107 (431)
Q Consensus 48 ~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~---~~~~~l~~~l~~~~~~~ii 107 (431)
+..++++||.|.+..+...... .++...|+.++.++. . ...+.+...++. +.++|+
T Consensus 71 ~~l~~~~gd~Vi~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~ 131 (388)
T 1b9h_A 71 QVMGVGPGTEVIVPAFTFISSS---QAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP-RTKVIM 131 (388)
T ss_dssp HHTTCCTTCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEEC
T ss_pred HHcCCCCcCEEEECCCccHHHH---HHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEE
Confidence 3335678898888777654443 345667876655543 2 456777777753 455655
No 186
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=21.10 E-value=2.1e+02 Score=22.20 Aligned_cols=21 Identities=0% Similarity=0.127 Sum_probs=19.4
Q ss_pred cccHHHHHHHHHHHHHHHHHc
Q 014065 30 DLTYSRIHELVERAASRLVAA 50 (431)
Q Consensus 30 ~~Ty~el~~~~~~~a~~L~~~ 50 (431)
-+||.|+.+++.++|..+.+.
T Consensus 8 l~s~~~i~~~i~~La~~I~~~ 28 (177)
T 3ohp_A 8 MISEQEVAQRIRELGQQITEH 28 (177)
T ss_dssp EECHHHHHHHHHHHHHHHHHH
T ss_pred eeCHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999876
No 187
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=20.97 E-value=2.1e+02 Score=23.91 Aligned_cols=31 Identities=13% Similarity=0.105 Sum_probs=23.2
Q ss_pred CccccccceEEEECCCCCcCCCCceeeEEEeC
Q 014065 335 SVGRPVGQEIAILDEIGVPQEGGAKGEVCIRG 366 (431)
Q Consensus 335 ~~G~~~~~~~~i~d~~~~~~~~~~~Gel~v~~ 366 (431)
..|.|+-...+|+|.+|++++.-. =|||-..
T Consensus 98 ~~G~~l~l~G~V~D~~G~Pv~~A~-VeiWqad 128 (254)
T 2boy_A 98 ESGDTLIFRGEVVDQEGAPLADVL-LDMWQAD 128 (254)
T ss_dssp CCSCEEEEEEEEECTTSCBCCSCE-EEEECCC
T ss_pred CCCCEEEEEEEEECCCCCCCCCCE-EEEEcCC
Confidence 457777788899999999998543 3788755
No 188
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=20.97 E-value=1.3e+02 Score=26.02 Aligned_cols=82 Identities=5% Similarity=0.087 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecC--CCCCHHH---HHHHHhcCCceE
Q 014065 33 YSRIHELVERAASRLVAA--GINAGDVVALTFPNTVEFVIMFLAVIRARATAAPLN--AAYTPDE---FEFYLSDSESKL 105 (431)
Q Consensus 33 y~el~~~~~~~a~~L~~~--gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~~~~~~~---l~~~l~~~~~~~ 105 (431)
++++.++.+.+-..+++. .++...+..+...+...++.-.|++-..+. .-++ ..-+..+ +...++..++++
T Consensus 172 ~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yGl~~~~~--~~~~~~~eps~~~l~~l~~~ik~~~v~~ 249 (313)
T 1toa_A 172 YQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGL--QGVSTASEASAHDMQELAAFIAQRKLPA 249 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEEE--ECSSCSSCCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCCCeEEEe--eccCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 444555555555555543 344334555666777888877776654442 2222 2334554 555567889999
Q ss_pred EEecCCchhHH
Q 014065 106 LLTPAEGNAAA 116 (431)
Q Consensus 106 ii~~~~~~~~~ 116 (431)
||+.....+..
T Consensus 250 If~e~~~~~~~ 260 (313)
T 1toa_A 250 IFIESSIPHKN 260 (313)
T ss_dssp EEEETTSCTHH
T ss_pred EEEeCCCChHH
Confidence 99988755443
No 189
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=20.86 E-value=4.2e+02 Score=24.16 Aligned_cols=61 Identities=15% Similarity=0.088 Sum_probs=41.0
Q ss_pred HcC-CCCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEEEecC
Q 014065 49 AAG-INAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLLLTPA 110 (431)
Q Consensus 49 ~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 110 (431)
+.| +++|+.|+.. ..+-.-..+.++|.+.|..++.+-|......-...++..++++++++.
T Consensus 154 ~~G~l~~g~tVV~a-SsGN~G~AlA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~ 215 (435)
T 1jbq_A 154 RDGTLKPGDTIIEP-TSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPT 215 (435)
T ss_dssp HHTCSCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC
T ss_pred HcCCCCCCCEEEEe-CCCHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecC
Confidence 345 5777766554 234445556677779998776655544445566788899999999864
No 190
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=20.71 E-value=4e+02 Score=23.85 Aligned_cols=56 Identities=9% Similarity=-0.108 Sum_probs=38.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceEE-Eec
Q 014065 53 NAGDVVALTFPNTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKLL-LTP 109 (431)
Q Consensus 53 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i-i~~ 109 (431)
++|+.|+ -...+-.-..+.++|.+.|..++.+-|.....+-...++..+++++ .++
T Consensus 143 ~~g~~Iv-~assGNhG~AlA~aaa~~Gl~~~ivmp~~~~~~k~~~~~~~GAeVv~~v~ 199 (389)
T 1wkv_A 143 EKGSLVA-DATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPE 199 (389)
T ss_dssp CTTCEEE-EECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETT
T ss_pred hcCCEEE-EECCcHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEEcC
Confidence 5665444 5555666777888888999977665444333444568899999999 666
No 191
>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural genomics, APC62130.1, methyltransferase, PSI-2, P structure initiative; 2.00A {Bacteroides fragilis} PDB: 3fq6_A
Probab=20.70 E-value=42 Score=24.04 Aligned_cols=59 Identities=12% Similarity=0.110 Sum_probs=32.9
Q ss_pred ccHHHHHHHHHHhc-CCcceEEecCCCcccHHHHHH-HHHHHHHHHHHcCCCCCCEEEEECCC
Q 014065 4 VTLIGLLNQVIDQF-SSKRALSVSGKFDLTYSRIHE-LVERAASRLVAAGINAGDVVALTFPN 64 (431)
Q Consensus 4 ~tl~~~l~~~a~~~-p~~~a~~~~~~~~~Ty~el~~-~~~~~a~~L~~~gl~~gd~V~i~~~n 64 (431)
..+.+.++...+.. |++++.+..+- +..|.++.+ ....++.++.+.++ +|+.|.++.++
T Consensus 53 ~Rl~~~l~~L~~~~g~~~~v~v~rel-Tk~~E~~~rgtl~el~~~~~~~~~-kGe~vivv~~~ 113 (115)
T 3ffy_A 53 HRLLKTLTQFAEYFGPERQVSVSREI-SKIHEETVRGTLSELIEHFTATDP-RGEIVIVLAGI 113 (115)
T ss_dssp TTHHHHHHHHHHHHCTTCEEEEEEES-SSSCEEEEEEEHHHHHHHHHHSCC-CSSEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEeeecc-CCCceEEEEeeHHHHHHHHHhcCC-CCCEEEEEeCC
Confidence 34667777766666 48888776542 222222211 23334444444454 78988888664
No 192
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=20.64 E-value=3.3e+02 Score=23.62 Aligned_cols=76 Identities=9% Similarity=0.069 Sum_probs=44.4
Q ss_pred cccHHHHHHHHHH---HHHHHHHcCCCCCCEEEEECCC-cHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCceE
Q 014065 30 DLTYSRIHELVER---AASRLVAAGINAGDVVALTFPN-TVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 30 ~~Ty~el~~~~~~---~a~~L~~~gl~~gd~V~i~~~n-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
.+++.+....... .-+.|.+.++++|++|+|.... .+-..++.+|....|+.++.+..+ .+.+.. +++.+++.
T Consensus 143 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~--~~~~~~-~~~~g~~~ 219 (347)
T 1jvb_A 143 RLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR--EEAVEA-AKRAGADY 219 (347)
T ss_dssp SSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS--HHHHHH-HHHHTCSE
T ss_pred CCCHHHcccchhhHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCC--HHHHHH-HHHhCCCE
Confidence 5677664322211 1234445689999999999988 566666666554438876655432 333333 34456666
Q ss_pred EEe
Q 014065 106 LLT 108 (431)
Q Consensus 106 ii~ 108 (431)
++.
T Consensus 220 ~~~ 222 (347)
T 1jvb_A 220 VIN 222 (347)
T ss_dssp EEE
T ss_pred Eec
Confidence 653
No 193
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=20.51 E-value=3.1e+02 Score=23.77 Aligned_cols=73 Identities=11% Similarity=0.045 Sum_probs=41.7
Q ss_pred cccHHHHHHHHHHH---HHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHhCc-EEEecCCCCCHHHHHHHHhcCCceE
Q 014065 30 DLTYSRIHELVERA---ASRLVAAGINAGDVVALTFPNTVEFVIMFLAVIRARA-TAAPLNAAYTPDEFEFYLSDSESKL 105 (431)
Q Consensus 30 ~~Ty~el~~~~~~~---a~~L~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ 105 (431)
.+++.+...- ..+ .+.|...++ +|++|+|...-.+-..++.+|- ..|+ .++.+..+ .+.+ ..++..+++.
T Consensus 142 ~~~~~~aa~~-~~~~ta~~~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~-~~Ga~~Vi~~~~~--~~~~-~~~~~~Ga~~ 215 (348)
T 2d8a_A 142 SIPPEYATLQ-EPLGNAVDTVLAGPI-SGKSVLITGAGPLGLLGIAVAK-ASGAYPVIVSEPS--DFRR-ELAKKVGADY 215 (348)
T ss_dssp TSCHHHHTTH-HHHHHHHHHHTTSCC-TTCCEEEECCSHHHHHHHHHHH-HTTCCSEEEECSC--HHHH-HHHHHHTCSE
T ss_pred CCCHHHHHhh-hHHHHHHHHHHhcCC-CCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCC--HHHH-HHHHHhCCCE
Confidence 5677664321 122 233434578 9999999999445566655555 4687 55555433 3333 3445566776
Q ss_pred EEe
Q 014065 106 LLT 108 (431)
Q Consensus 106 ii~ 108 (431)
++.
T Consensus 216 ~~~ 218 (348)
T 2d8a_A 216 VIN 218 (348)
T ss_dssp EEC
T ss_pred EEC
Confidence 653
No 194
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=20.32 E-value=4.4e+02 Score=23.11 Aligned_cols=75 Identities=15% Similarity=0.048 Sum_probs=43.8
Q ss_pred cccHHHHHHHHHH--HH-HHHHH-cC----CCCCCEEEEECC-CcHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhc
Q 014065 30 DLTYSRIHELVER--AA-SRLVA-AG----INAGDVVALTFP-NTVEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSD 100 (431)
Q Consensus 30 ~~Ty~el~~~~~~--~a-~~L~~-~g----l~~gd~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~ 100 (431)
.+++.+....... .| +.|.+ .+ +++|++|+|... -++-..++.+|. ..|+.++.+. +.+.+ ..++.
T Consensus 151 ~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~-~~Ga~Vi~~~---~~~~~-~~~~~ 225 (375)
T 2vn8_A 151 SLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMK-AWDAHVTAVC---SQDAS-ELVRK 225 (375)
T ss_dssp TSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEE---CGGGH-HHHHH
T ss_pred CCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHH-hCCCEEEEEe---ChHHH-HHHHH
Confidence 5777765332222 22 23322 36 899999999985 456666666655 5687655543 23333 34467
Q ss_pred CCceEEEec
Q 014065 101 SESKLLLTP 109 (431)
Q Consensus 101 ~~~~~ii~~ 109 (431)
.+++.++..
T Consensus 226 lGa~~v~~~ 234 (375)
T 2vn8_A 226 LGADDVIDY 234 (375)
T ss_dssp TTCSEEEET
T ss_pred cCCCEEEEC
Confidence 788777643
No 195
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=20.31 E-value=4.2e+02 Score=22.89 Aligned_cols=71 Identities=21% Similarity=0.155 Sum_probs=43.4
Q ss_pred cccHHHHHHHHHHH--HH-HH-HHcCCCCCCEEEEECCCc-HHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCce
Q 014065 30 DLTYSRIHELVERA--AS-RL-VAAGINAGDVVALTFPNT-VEFVIMFLAVIRARATAAPLNAAYTPDEFEFYLSDSESK 104 (431)
Q Consensus 30 ~~Ty~el~~~~~~~--a~-~L-~~~gl~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 104 (431)
.+++.+........ |. .| ...++++|++|+|....+ +-..++.+| ...|+.++.+ .+.+.+. .+++.++.
T Consensus 122 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a-~~~Ga~Vi~~---~~~~~~~-~~~~lGa~ 196 (343)
T 3gaz_A 122 ALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIA-LARGARVFAT---ARGSDLE-YVRDLGAT 196 (343)
T ss_dssp TSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEE---ECHHHHH-HHHHHTSE
T ss_pred CCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHH-HHCCCEEEEE---eCHHHHH-HHHHcCCC
Confidence 57777754333332 22 23 345899999999999555 555555555 4678876655 2444444 45667777
Q ss_pred E
Q 014065 105 L 105 (431)
Q Consensus 105 ~ 105 (431)
.
T Consensus 197 ~ 197 (343)
T 3gaz_A 197 P 197 (343)
T ss_dssp E
T ss_pred E
Confidence 7
No 196
>3e19_A FEOA; transcriptional regulator, metal-binding, iron uptake, beta- transcription regulator, metal binding protein; HET: GOL; 2.00A {Thermococcus thioreducens}
Probab=20.26 E-value=95 Score=20.05 Aligned_cols=22 Identities=23% Similarity=0.443 Sum_probs=18.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEC
Q 014065 41 ERAASRLVAAGINAGDVVALTF 62 (431)
Q Consensus 41 ~~~a~~L~~~gl~~gd~V~i~~ 62 (431)
..+.+.|.+.|+.+|..|-+.-
T Consensus 25 ~~~~~rL~~lGi~~G~~v~v~~ 46 (77)
T 3e19_A 25 HNARQKLVSMGLTPGATIQVLE 46 (77)
T ss_dssp HHHHHHHHTTTCSTTCEEEEEE
T ss_pred HHHHHHHHHCCCCCCCEEEEEE
Confidence 3678899999999999988874
Done!