Query 014067
Match_columns 431
No_of_seqs 187 out of 1437
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 01:32:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014067.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014067hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 6.4E-66 1.4E-70 529.9 26.5 409 1-430 154-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 1.5E-52 3.3E-57 411.5 23.1 361 2-427 120-493 (498)
3 PRK15462 dipeptide/tripeptide 100.0 4.5E-43 9.7E-48 355.9 29.6 363 2-429 103-487 (493)
4 TIGR00926 2A1704 Peptide:H+ sy 100.0 3.2E-42 6.9E-47 360.6 32.3 356 2-424 88-654 (654)
5 PF00854 PTR2: POT family; In 100.0 2.9E-43 6.3E-48 350.3 13.3 328 2-364 36-371 (372)
6 PRK10207 dipeptide/tripeptide 100.0 3.2E-38 7E-43 324.0 30.7 365 2-430 108-485 (489)
7 TIGR00924 yjdL_sub1_fam amino 100.0 5.7E-38 1.2E-42 321.7 29.6 352 2-426 105-473 (475)
8 PRK09584 tppB putative tripept 100.0 7.8E-37 1.7E-41 315.0 28.3 360 2-426 115-484 (500)
9 PRK11646 multidrug resistance 99.5 4.5E-12 9.7E-17 127.5 20.4 291 2-425 102-392 (400)
10 PRK11551 putative 3-hydroxyphe 99.4 4.5E-11 9.8E-16 120.0 23.8 81 2-88 106-186 (406)
11 TIGR00893 2A0114 d-galactonate 99.4 7.3E-11 1.6E-15 116.7 24.1 83 2-90 85-167 (399)
12 PRK03545 putative arabinose tr 99.4 6.7E-11 1.5E-15 118.4 23.1 279 2-422 100-381 (390)
13 PRK09874 drug efflux system pr 99.4 3.2E-11 7E-16 121.0 20.6 298 2-430 110-407 (408)
14 PRK10489 enterobactin exporter 99.4 7.7E-11 1.7E-15 119.0 23.2 289 4-428 115-406 (417)
15 TIGR00900 2A0121 H+ Antiporter 99.4 5.4E-11 1.2E-15 116.8 20.1 265 2-377 95-361 (365)
16 PRK05122 major facilitator sup 99.4 3.3E-10 7.1E-15 113.6 25.6 275 3-422 116-390 (399)
17 PRK10054 putative transporter; 99.4 2.6E-11 5.6E-16 121.7 17.2 77 5-88 102-178 (395)
18 PRK15402 multidrug efflux syst 99.3 5.7E-10 1.2E-14 112.2 25.2 81 2-88 104-184 (406)
19 TIGR00902 2A0127 phenyl propri 99.3 4.2E-10 9.1E-15 112.4 23.9 272 3-416 98-374 (382)
20 TIGR00894 2A0114euk Na(+)-depe 99.3 3.4E-10 7.4E-15 116.0 23.6 81 2-88 134-215 (465)
21 cd06174 MFS The Major Facilita 99.3 3.1E-10 6.8E-15 110.4 21.7 259 2-418 90-349 (352)
22 PRK11128 putative 3-phenylprop 99.3 3.6E-10 7.8E-15 112.8 21.8 255 3-377 98-353 (382)
23 TIGR00879 SP MFS transporter, 99.3 5.2E-10 1.1E-14 113.7 23.3 83 2-90 130-215 (481)
24 PF07690 MFS_1: Major Facilita 99.3 4.6E-11 1E-15 116.8 14.6 264 2-370 88-352 (352)
25 PRK12382 putative transporter; 99.3 1.2E-09 2.7E-14 109.2 23.1 274 2-421 115-389 (392)
26 PRK06814 acylglycerophosphoeth 99.2 6.4E-10 1.4E-14 126.4 20.9 279 2-377 111-394 (1140)
27 TIGR00710 efflux_Bcr_CflA drug 99.2 9.1E-09 2E-13 102.1 25.2 83 2-90 96-178 (385)
28 TIGR00899 2A0120 sugar efflux 99.2 3.8E-09 8.2E-14 104.5 22.3 83 4-90 92-174 (375)
29 TIGR00892 2A0113 monocarboxyla 99.2 5.2E-10 1.1E-14 114.5 16.5 276 7-377 116-393 (455)
30 PF05977 MFS_3: Transmembrane 99.2 4.7E-09 1E-13 108.6 22.8 261 2-377 106-367 (524)
31 TIGR00901 2A0125 AmpG-related 99.2 3.3E-09 7.1E-14 104.6 20.6 252 8-363 92-355 (356)
32 PRK15011 sugar efflux transpor 99.2 4.1E-09 8.9E-14 105.7 21.4 72 14-90 120-192 (393)
33 PRK11102 bicyclomycin/multidru 99.1 1.8E-08 3.8E-13 100.1 25.0 82 2-89 82-163 (377)
34 PRK14995 methyl viologen resis 99.1 2.5E-09 5.3E-14 110.7 19.5 84 2-90 97-180 (495)
35 PRK11010 ampG muropeptide tran 99.1 1.1E-08 2.5E-13 105.6 24.2 81 3-89 111-192 (491)
36 PRK11663 regulatory protein Uh 99.1 1.2E-08 2.5E-13 103.9 23.4 78 3-86 115-192 (434)
37 PRK10077 xylE D-xylose transpo 99.1 1.9E-08 4.1E-13 103.3 25.1 81 3-89 124-212 (479)
38 TIGR00895 2A0115 benzoate tran 99.1 7.4E-09 1.6E-13 102.8 21.2 81 2-88 108-188 (398)
39 TIGR00711 efflux_EmrB drug res 99.1 2.9E-09 6.3E-14 109.4 18.7 306 2-377 93-408 (485)
40 TIGR00890 2A0111 Oxalate/Forma 99.1 4E-09 8.6E-14 103.9 18.9 81 2-89 94-174 (377)
41 PRK10213 nepI ribonucleoside t 99.1 1.9E-08 4.2E-13 100.9 23.7 79 2-86 111-189 (394)
42 PRK10504 putative transporter; 99.1 3.7E-08 8E-13 101.1 25.9 84 2-91 101-184 (471)
43 TIGR00903 2A0129 major facilit 99.1 1.9E-08 4.2E-13 100.0 22.8 80 2-88 82-161 (368)
44 TIGR00792 gph sugar (Glycoside 99.1 2.1E-08 4.5E-13 101.7 23.3 112 237-379 262-380 (437)
45 PRK09528 lacY galactoside perm 99.1 3.8E-09 8.3E-14 106.8 17.7 140 235-423 265-405 (420)
46 TIGR00883 2A0106 metabolite-pr 99.1 6.7E-09 1.5E-13 102.9 19.2 79 2-86 99-185 (394)
47 PRK12307 putative sialic acid 99.1 1.5E-08 3.2E-13 102.5 21.0 75 2-82 109-183 (426)
48 PRK11195 lysophospholipid tran 99.1 4.6E-08 9.9E-13 98.2 24.3 76 4-86 93-168 (393)
49 PRK10406 alpha-ketoglutarate t 99.1 2.9E-08 6.3E-13 100.8 23.0 77 2-84 127-211 (432)
50 KOG2532 Permease of the major 99.1 1.4E-08 3.1E-13 103.4 20.2 302 2-421 131-447 (466)
51 PRK11652 emrD multidrug resist 99.0 9.3E-08 2E-12 95.7 24.9 80 2-87 99-178 (394)
52 PRK10091 MFS transport protein 99.0 4.1E-08 8.9E-13 98.0 21.9 80 2-87 94-173 (382)
53 PRK09952 shikimate transporter 99.0 9.8E-08 2.1E-12 97.2 24.9 76 2-83 128-211 (438)
54 PRK09705 cynX putative cyanate 99.0 7.2E-08 1.6E-12 96.7 22.9 78 2-86 100-178 (393)
55 TIGR00891 2A0112 putative sial 99.0 2E-08 4.3E-13 100.2 18.8 79 2-86 103-183 (405)
56 PRK11273 glpT sn-glycerol-3-ph 99.0 1.1E-07 2.4E-12 97.2 24.4 80 3-88 124-204 (452)
57 PRK03633 putative MFS family t 99.0 6.7E-08 1.5E-12 96.4 22.3 56 322-377 290-345 (381)
58 TIGR00898 2A0119 cation transp 99.0 7.3E-08 1.6E-12 99.8 23.2 79 2-89 183-261 (505)
59 COG2271 UhpC Sugar phosphate p 99.0 9.4E-09 2E-13 100.5 15.3 304 2-422 120-435 (448)
60 TIGR00881 2A0104 phosphoglycer 99.0 1.8E-08 4E-13 99.2 17.7 83 2-90 86-169 (379)
61 PF13347 MFS_2: MFS/sugar tran 99.0 8.4E-08 1.8E-12 97.3 22.7 302 3-426 107-426 (428)
62 TIGR01299 synapt_SV2 synaptic 99.0 1.1E-07 2.4E-12 102.0 24.4 81 276-377 628-708 (742)
63 COG2814 AraJ Arabinose efflux 99.0 1E-07 2.2E-12 94.0 22.1 84 2-91 104-187 (394)
64 PRK08633 2-acyl-glycerophospho 99.0 6.6E-08 1.4E-12 110.0 23.9 263 2-377 106-382 (1146)
65 TIGR01301 GPH_sucrose GPH fami 99.0 2.6E-07 5.7E-12 94.3 25.5 295 7-378 122-443 (477)
66 PRK03699 putative transporter; 99.0 1.9E-07 4E-12 93.7 23.7 81 2-88 98-179 (394)
67 PRK11043 putative transporter; 99.0 1.6E-07 3.4E-12 94.2 23.0 82 2-89 97-178 (401)
68 PRK10473 multidrug efflux syst 98.9 3E-07 6.5E-12 91.9 24.4 80 3-88 95-174 (392)
69 PRK09556 uhpT sugar phosphate 98.9 6E-08 1.3E-12 99.6 19.7 81 2-88 125-208 (467)
70 PRK10642 proline/glycine betai 98.9 2.1E-07 4.5E-12 96.2 23.8 76 2-83 121-204 (490)
71 PRK11902 ampG muropeptide tran 98.9 3.3E-07 7E-12 92.2 23.5 76 7-88 102-178 (402)
72 PRK03893 putative sialic acid 98.9 1.8E-07 3.8E-12 96.6 21.9 75 2-82 111-185 (496)
73 PRK15075 citrate-proton sympor 98.9 2.4E-07 5.2E-12 94.2 22.4 72 2-79 120-199 (434)
74 TIGR00712 glpT glycerol-3-phos 98.9 1.9E-07 4.2E-12 95.0 21.3 81 3-89 122-203 (438)
75 KOG1330 Sugar transporter/spin 98.9 1.1E-08 2.3E-13 101.0 11.2 83 2-90 124-207 (493)
76 TIGR00897 2A0118 polyol permea 98.9 5.6E-07 1.2E-11 90.5 23.4 70 3-78 109-179 (402)
77 PRK15403 multidrug efflux syst 98.9 9.9E-07 2.1E-11 89.1 25.0 81 2-88 107-187 (413)
78 PRK09848 glucuronide transport 98.9 5.6E-07 1.2E-11 91.8 23.3 89 272-379 293-388 (448)
79 TIGR00882 2A0105 oligosacchari 98.8 2.7E-07 5.8E-12 92.5 19.7 82 275-377 286-368 (396)
80 TIGR02332 HpaX 4-hydroxyphenyl 98.8 3.3E-07 7.1E-12 92.6 20.4 82 2-89 99-186 (412)
81 TIGR00889 2A0110 nucleoside tr 98.8 7.1E-07 1.5E-11 90.4 21.6 149 237-424 256-405 (418)
82 TIGR00896 CynX cyanate transpo 98.8 5.2E-07 1.1E-11 88.9 19.1 77 2-85 90-168 (355)
83 PRK09669 putative symporter Ya 98.7 2.5E-06 5.4E-11 87.0 22.7 65 316-380 318-389 (444)
84 TIGR00788 fbt folate/biopterin 98.7 3.4E-07 7.3E-12 94.1 15.5 81 5-89 126-206 (468)
85 TIGR00887 2A0109 phosphate:H+ 98.7 8.4E-06 1.8E-10 84.5 25.5 79 2-86 118-219 (502)
86 TIGR01272 gluP glucose/galacto 98.7 6E-06 1.3E-10 80.1 22.4 83 2-90 13-111 (310)
87 PLN00028 nitrate transmembrane 98.7 2E-06 4.4E-11 88.6 20.1 80 3-89 128-216 (476)
88 TIGR02718 sider_RhtX_FptX side 98.7 4.8E-06 1E-10 83.3 22.1 55 323-377 309-364 (390)
89 TIGR00926 2A1704 Peptide:H+ sy 98.6 7E-07 1.5E-11 94.7 16.4 246 4-300 87-342 (654)
90 PRK10429 melibiose:sodium symp 98.6 6E-06 1.3E-10 85.0 20.3 116 237-379 271-393 (473)
91 PRK10133 L-fucose transporter; 98.5 1.8E-05 4E-10 80.6 20.1 58 2-65 120-177 (438)
92 TIGR00886 2A0108 nitrite extru 98.4 6E-06 1.3E-10 81.4 14.2 77 2-85 94-181 (366)
93 TIGR00885 fucP L-fucose:H+ sym 98.4 3.6E-05 7.7E-10 77.8 19.6 81 2-88 97-203 (410)
94 PF03209 PUCC: PUCC protein; 98.4 0.00011 2.4E-09 72.4 21.8 89 274-380 276-364 (403)
95 PRK03545 putative arabinose tr 98.3 1.1E-05 2.5E-10 80.5 14.4 136 235-419 47-182 (390)
96 TIGR02332 HpaX 4-hydroxyphenyl 98.3 2.5E-05 5.5E-10 78.8 16.6 111 235-377 46-156 (412)
97 PRK11462 putative transporter; 98.3 0.00026 5.7E-09 72.6 23.6 78 8-90 118-202 (460)
98 KOG1330 Sugar transporter/spin 98.3 2.7E-06 5.9E-11 84.3 8.1 144 235-426 71-214 (493)
99 TIGR00805 oat sodium-independe 98.2 0.00019 4E-09 76.6 22.0 84 2-91 175-280 (633)
100 TIGR00710 efflux_Bcr_CflA drug 98.2 5E-05 1.1E-09 75.2 15.4 140 235-423 43-182 (385)
101 PRK14995 methyl viologen resis 98.2 8.9E-05 1.9E-09 76.8 17.7 112 234-377 43-155 (495)
102 KOG2533 Permease of the major 98.2 0.00065 1.4E-08 69.8 23.5 80 3-88 138-223 (495)
103 KOG3764 Vesicular amine transp 98.1 8.2E-05 1.8E-09 72.7 15.2 85 1-90 161-245 (464)
104 TIGR00711 efflux_EmrB drug res 98.1 6.4E-05 1.4E-09 77.2 15.7 112 234-377 39-150 (485)
105 PF01306 LacY_symp: LacY proto 98.1 0.00028 6E-09 70.5 19.2 95 315-426 310-405 (412)
106 COG2814 AraJ Arabinose efflux 98.1 7.7E-05 1.7E-09 73.8 14.4 140 234-422 50-189 (394)
107 KOG3764 Vesicular amine transp 98.1 2E-05 4.3E-10 76.8 9.8 147 233-428 107-254 (464)
108 PRK11551 putative 3-hydroxyphe 98.1 0.00013 2.7E-09 73.2 16.2 111 235-377 53-163 (406)
109 TIGR00880 2_A_01_02 Multidrug 98.1 0.00013 2.8E-09 60.6 13.7 108 238-377 4-111 (141)
110 PRK10091 MFS transport protein 98.1 0.00011 2.4E-09 73.2 15.5 112 234-377 40-151 (382)
111 PF07690 MFS_1: Major Facilita 98.1 5.4E-05 1.2E-09 73.8 12.9 134 235-417 35-168 (352)
112 PRK10213 nepI ribonucleoside t 98.1 0.00016 3.4E-09 72.6 16.4 110 236-377 59-168 (394)
113 PRK10054 putative transporter; 98.0 0.00012 2.5E-09 73.6 15.2 112 234-377 45-156 (395)
114 PF11700 ATG22: Vacuole efflux 98.0 0.002 4.3E-08 66.3 24.2 84 324-423 387-470 (477)
115 PRK15034 nitrate/nitrite trans 98.0 0.0006 1.3E-08 69.5 20.0 83 2-91 131-231 (462)
116 PRK15403 multidrug efflux syst 98.0 9E-05 1.9E-09 74.9 14.1 138 236-422 55-192 (413)
117 TIGR00893 2A0114 d-galactonate 98.0 0.0001 2.2E-09 72.7 13.5 138 234-420 31-168 (399)
118 TIGR00900 2A0121 H+ Antiporter 98.0 0.00011 2.4E-09 71.9 13.6 116 235-377 37-152 (365)
119 PRK11663 regulatory protein Uh 98.0 0.00029 6.3E-09 71.6 16.7 111 235-377 61-171 (434)
120 TIGR00891 2A0112 putative sial 98.0 0.00017 3.6E-09 71.8 14.7 112 234-377 49-160 (405)
121 PRK11646 multidrug resistance 98.0 0.00026 5.7E-09 71.2 15.9 108 238-377 52-159 (400)
122 PRK10473 multidrug efflux syst 97.9 0.00023 5E-09 71.1 15.0 137 236-421 42-178 (392)
123 PRK09874 drug efflux system pr 97.9 0.00065 1.4E-08 68.0 17.5 137 236-422 58-194 (408)
124 PF03825 Nuc_H_symport: Nucleo 97.9 0.0025 5.4E-08 64.1 21.4 129 270-425 270-399 (400)
125 PRK09556 uhpT sugar phosphate 97.9 0.00011 2.4E-09 75.5 11.9 115 235-376 67-181 (467)
126 TIGR00895 2A0115 benzoate tran 97.9 0.00016 3.4E-09 71.7 12.5 111 235-377 55-165 (398)
127 PRK09705 cynX putative cyanate 97.8 0.00026 5.7E-09 70.9 13.7 111 234-377 46-156 (393)
128 PRK10504 putative transporter; 97.8 0.00057 1.2E-08 70.0 16.4 110 236-377 49-158 (471)
129 TIGR00881 2A0104 phosphoglycer 97.8 7.9E-05 1.7E-09 73.2 9.4 139 235-422 33-172 (379)
130 COG2211 MelB Na+/melibiose sym 97.8 0.004 8.7E-08 63.1 21.5 85 274-377 303-394 (467)
131 PRK15402 multidrug efflux syst 97.8 0.00095 2.1E-08 67.0 17.2 135 236-419 52-186 (406)
132 TIGR00886 2A0108 nitrite extru 97.8 0.0012 2.5E-08 65.0 17.3 111 234-376 39-149 (366)
133 COG2807 CynX Cyanate permease 97.8 0.0041 9E-08 60.4 20.0 81 2-89 102-183 (395)
134 PRK03633 putative MFS family t 97.8 0.0013 2.8E-08 65.5 17.4 112 234-377 43-154 (381)
135 TIGR00879 SP MFS transporter, 97.8 0.00046 9.9E-09 70.0 14.3 110 235-373 74-183 (481)
136 PRK12382 putative transporter; 97.7 0.00081 1.7E-08 67.1 15.3 119 235-377 54-172 (392)
137 KOG0569 Permease of the major 97.7 0.011 2.3E-07 60.5 23.3 84 1-90 118-203 (485)
138 cd06174 MFS The Major Facilita 97.7 0.0006 1.3E-08 66.0 13.6 111 235-377 37-147 (352)
139 TIGR01299 synapt_SV2 synaptic 97.7 0.0014 3.1E-08 70.8 17.2 110 235-376 205-314 (742)
140 PRK11102 bicyclomycin/multidru 97.7 0.00059 1.3E-08 67.5 13.4 139 235-422 29-167 (377)
141 TIGR00885 fucP L-fucose:H+ sym 97.7 0.0019 4.2E-08 65.2 16.8 115 234-377 40-154 (410)
142 PRK03699 putative transporter; 97.7 0.0019 4.1E-08 64.7 16.3 110 235-376 45-154 (394)
143 TIGR00805 oat sodium-independe 97.6 0.00049 1.1E-08 73.4 12.6 134 234-378 70-233 (633)
144 TIGR00894 2A0114euk Na(+)-depe 97.6 0.00064 1.4E-08 69.6 12.7 113 235-377 79-191 (465)
145 TIGR00924 yjdL_sub1_fam amino 97.6 0.00093 2E-08 68.9 13.8 142 235-425 51-196 (475)
146 COG2223 NarK Nitrate/nitrite t 97.6 0.0066 1.4E-07 60.0 18.6 71 16-93 121-194 (417)
147 PRK12307 putative sialic acid 97.6 0.0031 6.8E-08 63.5 17.3 111 235-377 56-166 (426)
148 PRK05122 major facilitator sup 97.6 0.0011 2.4E-08 66.2 13.8 120 234-377 53-172 (399)
149 PRK10207 dipeptide/tripeptide 97.6 0.00096 2.1E-08 69.0 13.2 103 244-377 62-167 (489)
150 TIGR00903 2A0129 major facilit 97.6 0.0017 3.7E-08 64.6 14.4 90 316-423 78-167 (368)
151 TIGR00890 2A0111 Oxalate/Forma 97.6 0.0013 2.9E-08 64.4 13.4 137 235-421 41-177 (377)
152 PRK11652 emrD multidrug resist 97.5 0.0033 7.2E-08 62.7 16.3 111 235-377 46-156 (394)
153 TIGR00806 rfc RFC reduced fola 97.5 0.025 5.5E-07 57.5 22.0 81 2-90 118-201 (511)
154 TIGR00898 2A0119 cation transp 97.5 0.00097 2.1E-08 69.0 12.2 132 235-418 130-261 (505)
155 PRK03893 putative sialic acid 97.5 0.0054 1.2E-07 63.2 17.2 111 235-377 58-168 (496)
156 PF03092 BT1: BT1 family; Int 97.5 0.001 2.3E-08 67.6 11.6 85 4-92 91-175 (433)
157 PRK11273 glpT sn-glycerol-3-ph 97.5 0.004 8.7E-08 63.6 15.8 107 236-370 67-173 (452)
158 PRK10077 xylE D-xylose transpo 97.5 0.0061 1.3E-07 62.5 17.3 122 236-377 59-180 (479)
159 PRK11043 putative transporter; 97.4 0.0051 1.1E-07 61.6 16.2 111 235-377 44-154 (401)
160 TIGR00712 glpT glycerol-3-phos 97.4 0.0032 6.8E-08 64.1 14.8 144 235-422 64-207 (438)
161 PRK11195 lysophospholipid tran 97.4 0.0019 4.1E-08 64.8 12.6 108 235-377 41-148 (393)
162 TIGR00806 rfc RFC reduced fola 97.4 0.013 2.8E-07 59.6 18.3 100 244-376 74-173 (511)
163 PF06609 TRI12: Fungal trichot 97.4 0.038 8.2E-07 58.1 22.2 82 2-90 134-215 (599)
164 COG0738 FucP Fucose permease [ 97.4 0.031 6.6E-07 55.2 20.1 59 2-66 107-165 (422)
165 TIGR00901 2A0125 AmpG-related 97.4 0.0073 1.6E-07 59.3 16.2 84 276-377 60-143 (356)
166 PRK10489 enterobactin exporter 97.4 0.0019 4.2E-08 65.0 12.4 117 234-377 54-170 (417)
167 TIGR00892 2A0113 monocarboxyla 97.4 0.0031 6.7E-08 64.6 13.7 136 235-420 57-193 (455)
168 PTZ00207 hypothetical protein; 97.3 0.0089 1.9E-07 62.9 16.8 119 272-425 90-209 (591)
169 PRK11010 ampG muropeptide tran 97.3 0.013 2.8E-07 60.7 18.1 132 251-418 60-192 (491)
170 PRK09584 tppB putative tripept 97.3 0.0048 1E-07 64.0 14.7 116 274-426 89-206 (500)
171 KOG3762 Predicted transporter 97.3 0.01 2.2E-07 60.4 16.0 151 228-427 402-553 (618)
172 TIGR00880 2_A_01_02 Multidrug 97.3 0.0005 1.1E-08 57.0 5.9 82 3-90 55-136 (141)
173 TIGR00897 2A0118 polyol permea 97.3 0.0092 2E-07 59.9 15.5 115 234-376 50-165 (402)
174 PRK08633 2-acyl-glycerophospho 97.2 0.0024 5.2E-08 72.9 12.5 115 235-378 50-164 (1146)
175 KOG2504 Monocarboxylate transp 97.2 0.018 3.8E-07 59.8 17.4 110 275-421 367-476 (509)
176 KOG2533 Permease of the major 97.2 0.008 1.7E-07 61.9 14.3 95 316-421 133-227 (495)
177 TIGR00899 2A0120 sugar efflux 97.2 0.0086 1.9E-07 59.0 14.2 140 235-423 36-178 (375)
178 PRK06814 acylglycerophosphoeth 97.2 0.0043 9.4E-08 71.0 13.5 63 315-377 106-168 (1140)
179 TIGR01301 GPH_sucrose GPH fami 97.2 0.0063 1.4E-07 62.5 13.2 177 235-425 42-222 (477)
180 KOG2615 Permease of the major 97.1 0.0099 2.1E-07 58.2 13.5 62 319-380 354-415 (451)
181 PRK11902 ampG muropeptide tran 97.1 0.017 3.8E-07 57.9 15.2 84 276-377 71-154 (402)
182 PRK10642 proline/glycine betai 97.1 0.0089 1.9E-07 61.8 13.4 90 274-376 88-177 (490)
183 TIGR00887 2A0109 phosphate:H+ 97.0 0.0093 2E-07 61.9 13.1 116 236-377 60-175 (502)
184 PLN00028 nitrate transmembrane 97.0 0.019 4.2E-07 59.1 15.2 105 239-376 78-182 (476)
185 KOG0254 Predicted transporter 97.0 0.18 4E-06 52.4 22.5 80 2-87 145-225 (513)
186 COG2271 UhpC Sugar phosphate p 97.0 0.0079 1.7E-07 59.6 11.3 115 270-422 91-207 (448)
187 TIGR00896 CynX cyanate transpo 97.0 0.013 2.8E-07 57.6 13.1 110 234-377 37-146 (355)
188 PRK10133 L-fucose transporter; 96.9 0.013 2.9E-07 59.6 13.3 113 235-376 64-176 (438)
189 COG2270 Permeases of the major 96.9 0.11 2.3E-06 51.8 18.7 87 274-381 319-405 (438)
190 PRK10406 alpha-ketoglutarate t 96.9 0.033 7.2E-07 56.5 15.6 110 248-377 75-184 (432)
191 PRK15462 dipeptide/tripeptide 96.8 0.022 4.7E-07 58.8 13.6 135 243-425 56-193 (493)
192 TIGR00883 2A0106 metabolite-pr 96.8 0.012 2.7E-07 57.9 11.3 90 275-377 67-156 (394)
193 TIGR00889 2A0110 nucleoside tr 96.7 0.0018 3.9E-08 65.5 4.7 83 3-91 312-401 (418)
194 PF05977 MFS_3: Transmembrane 96.7 0.029 6.2E-07 58.5 13.3 117 234-377 47-163 (524)
195 KOG4686 Predicted sugar transp 96.6 0.046 9.9E-07 51.6 12.6 147 232-424 297-446 (459)
196 KOG0255 Synaptic vesicle trans 96.6 1.1 2.5E-05 46.4 24.9 77 2-87 174-250 (521)
197 KOG2816 Predicted transporter 96.5 0.073 1.6E-06 54.5 15.0 84 275-380 310-393 (463)
198 TIGR00792 gph sugar (Glycoside 96.5 0.014 3.1E-07 58.9 9.8 121 235-376 38-159 (437)
199 PRK15075 citrate-proton sympor 96.4 0.11 2.4E-06 52.6 16.0 91 274-377 87-177 (434)
200 PRK15034 nitrate/nitrite trans 96.4 0.3 6.5E-06 50.0 18.4 82 274-372 101-182 (462)
201 PRK09952 shikimate transporter 96.4 0.06 1.3E-06 54.8 13.5 111 247-377 75-185 (438)
202 KOG2532 Permease of the major 96.3 0.067 1.5E-06 54.9 13.4 117 271-422 101-217 (466)
203 KOG3626 Organic anion transpor 96.3 0.064 1.4E-06 57.2 13.0 89 1-95 239-346 (735)
204 PRK15011 sugar efflux transpor 96.1 0.15 3.3E-06 50.9 14.7 91 316-423 104-196 (393)
205 KOG3626 Organic anion transpor 96.0 0.097 2.1E-06 55.9 13.0 151 271-426 160-348 (735)
206 KOG0254 Predicted transporter 96.0 0.086 1.9E-06 54.9 12.7 106 235-372 92-197 (513)
207 KOG1237 H+/oligopeptide sympor 95.9 0.013 2.7E-07 61.6 6.0 210 3-291 63-274 (571)
208 PF06609 TRI12: Fungal trichot 95.8 0.42 9.2E-06 50.4 16.4 122 222-377 69-190 (599)
209 TIGR00882 2A0105 oligosacchari 95.7 0.19 4.1E-06 50.2 13.4 116 235-377 41-157 (396)
210 PF00854 PTR2: POT family; In 95.7 0.054 1.2E-06 53.8 9.3 124 275-427 3-129 (372)
211 KOG2563 Permease of the major 95.7 0.17 3.7E-06 50.7 12.5 45 318-362 360-404 (480)
212 PF03209 PUCC: PUCC protein; 95.7 0.76 1.7E-05 45.8 16.9 93 276-376 53-148 (403)
213 KOG2325 Predicted transporter/ 95.5 0.16 3.4E-06 51.9 11.8 158 235-426 74-234 (488)
214 KOG3098 Uncharacterized conser 95.5 3.4 7.3E-05 42.2 22.7 160 234-425 277-439 (461)
215 TIGR01272 gluP glucose/galacto 95.5 0.11 2.4E-06 50.2 10.3 63 315-377 8-70 (310)
216 PF03137 OATP: Organic Anion T 95.3 0.0037 8.1E-08 65.3 -0.6 143 221-377 27-201 (539)
217 COG0738 FucP Fucose permease [ 94.8 1.2 2.5E-05 44.3 14.8 143 202-377 21-164 (422)
218 PF03137 OATP: Organic Anion T 94.7 0.0079 1.7E-07 62.8 -0.4 90 1-96 143-254 (539)
219 PRK11128 putative 3-phenylprop 94.6 0.38 8.3E-06 47.7 11.5 111 234-377 41-152 (382)
220 PF05978 UNC-93: Ion channel r 94.5 2.9 6.3E-05 36.1 15.9 62 316-377 88-149 (156)
221 KOG2615 Permease of the major 94.4 0.21 4.5E-06 49.2 8.6 108 238-378 74-181 (451)
222 TIGR00902 2A0127 phenyl propri 94.3 0.58 1.3E-05 46.5 12.2 60 316-377 93-152 (382)
223 KOG0569 Permease of the major 94.2 1.3 2.9E-05 45.4 14.5 58 316-373 115-172 (485)
224 TIGR02718 sider_RhtX_FptX side 94.1 0.45 9.8E-06 47.3 10.9 87 317-420 97-183 (390)
225 PRK09528 lacY galactoside perm 94.1 0.046 9.9E-07 55.1 3.7 79 5-89 321-400 (420)
226 PRK09669 putative symporter Ya 94.1 0.24 5.2E-06 50.4 9.0 115 238-373 51-166 (444)
227 PRK11462 putative transporter; 94.0 1.2 2.5E-05 45.8 14.0 84 276-374 83-167 (460)
228 PTZ00207 hypothetical protein; 94.0 9.8 0.00021 40.4 23.2 76 2-86 123-199 (591)
229 PF11700 ATG22: Vacuole efflux 93.3 0.18 3.9E-06 52.0 6.3 83 2-90 383-466 (477)
230 COG2223 NarK Nitrate/nitrite t 93.3 1.6 3.4E-05 43.6 12.5 118 232-377 46-163 (417)
231 PF00083 Sugar_tr: Sugar (and 93.2 0.00023 5E-09 72.5 -15.0 79 2-86 105-186 (451)
232 PF13347 MFS_2: MFS/sugar tran 93.0 0.42 9.1E-06 48.3 8.6 125 276-423 75-200 (428)
233 KOG0255 Synaptic vesicle trans 92.5 1.4 3E-05 45.8 12.0 84 315-418 169-252 (521)
234 PRK10429 melibiose:sodium symp 92.2 1.1 2.3E-05 46.2 10.5 116 237-373 47-163 (473)
235 KOG2325 Predicted transporter/ 91.8 0.44 9.6E-06 48.7 6.9 60 321-380 392-451 (488)
236 KOG2816 Predicted transporter 91.5 5.6 0.00012 40.8 14.5 103 240-377 70-172 (463)
237 KOG4686 Predicted sugar transp 90.4 0.64 1.4E-05 44.1 5.8 77 3-85 356-435 (459)
238 COG2211 MelB Na+/melibiose sym 89.3 3.1 6.7E-05 42.5 10.3 100 314-426 109-209 (467)
239 PF03092 BT1: BT1 family; Int 88.7 4.7 0.0001 41.0 11.4 84 276-377 62-148 (433)
240 PF06813 Nodulin-like: Nodulin 88.3 12 0.00026 35.1 12.8 122 271-425 64-185 (250)
241 PRK09848 glucuronide transport 88.0 5.2 0.00011 40.6 11.3 109 235-363 47-156 (448)
242 COG2807 CynX Cyanate permease 87.7 15 0.00033 36.3 13.3 139 236-424 51-189 (395)
243 TIGR00939 2a57 Equilibrative N 87.4 10 0.00022 38.6 12.8 123 270-421 72-196 (437)
244 KOG2504 Monocarboxylate transp 87.1 4.6 0.0001 42.0 10.3 139 234-423 83-222 (509)
245 KOG0253 Synaptic vesicle trans 86.9 35 0.00077 34.1 18.3 54 319-377 440-493 (528)
246 KOG0637 Sucrose transporter an 86.1 3.6 7.8E-05 41.7 8.3 163 190-374 32-200 (498)
247 PF03825 Nuc_H_symport: Nucleo 84.4 1.4 3.1E-05 44.3 4.8 78 9-92 311-395 (400)
248 TIGR00769 AAA ADP/ATP carrier 82.9 61 0.0013 33.4 21.0 52 322-373 381-433 (472)
249 TIGR00788 fbt folate/biopterin 82.3 24 0.00053 36.2 13.0 58 319-377 122-182 (468)
250 COG3104 PTR2 Dipeptide/tripept 79.6 5 0.00011 41.1 6.6 118 273-426 92-211 (498)
251 PF00083 Sugar_tr: Sugar (and 77.6 0.022 4.7E-07 57.9 -11.2 61 316-376 101-161 (451)
252 PF01891 CbiM: Cobalt uptake s 76.6 39 0.00085 30.4 11.0 100 238-348 105-204 (205)
253 KOG0252 Inorganic phosphate tr 76.2 8.6 0.00019 39.2 7.0 149 232-412 81-233 (538)
254 KOG3574 Acetyl-CoA transporter 73.0 9.8 0.00021 37.9 6.3 108 318-429 370-496 (510)
255 KOG2563 Permease of the major 72.6 52 0.0011 33.6 11.4 57 320-376 143-199 (480)
256 TIGR00769 AAA ADP/ATP carrier 69.7 1.4E+02 0.0031 30.8 18.3 43 336-378 148-190 (472)
257 COG2270 Permeases of the major 69.5 5.7 0.00012 39.8 4.0 80 5-90 347-427 (438)
258 PF03219 TLC: TLC ATP/ADP tran 65.2 68 0.0015 33.2 11.0 28 39-66 178-205 (491)
259 COG0477 ProP Permeases of the 63.4 68 0.0015 29.0 10.1 62 316-377 93-156 (338)
260 PRK07331 cobalt transport prot 60.7 1.1E+02 0.0023 29.9 10.8 107 239-350 107-220 (322)
261 COG3202 ATP/ADP translocase [E 58.3 2.3E+02 0.005 29.3 15.9 53 325-377 152-208 (509)
262 PF01306 LacY_symp: LacY proto 55.8 66 0.0014 32.5 8.7 29 234-262 45-73 (412)
263 PF06963 FPN1: Ferroportin1 (F 53.7 2.6E+02 0.0056 28.5 18.0 63 314-376 353-415 (432)
264 COG0477 ProP Permeases of the 51.4 28 0.0006 31.7 5.2 76 4-84 99-177 (338)
265 PF02487 CLN3: CLN3 protein; 50.1 1.8E+02 0.0039 29.3 10.8 94 252-377 74-167 (402)
266 KOG0252 Inorganic phosphate tr 49.6 37 0.00081 34.8 5.8 74 20-95 63-136 (538)
267 KOG1479 Nucleoside transporter 48.8 3E+02 0.0065 27.8 12.8 86 316-418 116-201 (406)
268 COG3202 ATP/ADP translocase [E 48.4 2.9E+02 0.0063 28.6 11.9 30 38-67 181-210 (509)
269 KOG3098 Uncharacterized conser 47.2 2E+02 0.0044 29.5 10.7 66 315-380 100-165 (461)
270 PF14007 YtpI: YtpI-like prote 45.3 52 0.0011 25.4 4.8 53 47-100 34-86 (89)
271 PF02487 CLN3: CLN3 protein; 44.7 2E+02 0.0044 29.0 10.1 62 316-377 334-395 (402)
272 PF03219 TLC: TLC ATP/ADP tran 42.8 4.1E+02 0.0088 27.6 15.2 54 325-378 148-205 (491)
273 PF06645 SPC12: Microsomal sig 42.4 65 0.0014 24.0 4.8 52 42-96 9-60 (76)
274 PRK08319 cobalt transport prot 42.4 2.2E+02 0.0048 26.0 9.4 31 321-351 183-213 (224)
275 PRK11909 cobalt transport prot 40.2 3E+02 0.0065 25.3 11.2 36 316-351 182-218 (230)
276 KOG3574 Acetyl-CoA transporter 38.3 4.4E+02 0.0096 26.7 11.2 164 239-426 74-241 (510)
277 KOG3810 Micronutrient transpor 38.1 3.1E+02 0.0066 27.4 9.8 102 315-427 324-427 (433)
278 PRK11715 inner membrane protei 34.9 5.1E+02 0.011 26.4 11.5 19 278-296 306-324 (436)
279 PF05631 DUF791: Protein of un 34.3 1.3E+02 0.0028 29.7 6.8 88 2-91 124-215 (354)
280 TIGR00123 cbiM cobalamin biosy 33.3 3.7E+02 0.0081 24.4 10.5 101 238-350 108-212 (214)
281 PF06123 CreD: Inner membrane 33.0 5.4E+02 0.012 26.2 11.7 20 278-297 300-319 (430)
282 PRK03612 spermidine synthase; 29.4 75 0.0016 33.2 4.6 51 41-91 145-197 (521)
283 PRK06265 cobalt transport prot 29.0 4.2E+02 0.0091 23.7 10.3 96 239-351 101-198 (199)
284 PF11151 DUF2929: Protein of u 28.2 2.1E+02 0.0046 20.0 6.2 38 45-82 6-43 (57)
285 KOG4112 Signal peptidase subun 27.2 1.4E+02 0.003 23.2 4.3 49 45-96 27-75 (101)
286 PF01102 Glycophorin_A: Glycop 26.0 78 0.0017 26.0 3.1 25 402-426 70-94 (122)
287 KOG2927 Membrane component of 25.7 1.2E+02 0.0027 29.6 4.8 32 342-376 206-237 (372)
288 PF07672 MFS_Mycoplasma: Mycop 25.3 55 0.0012 30.8 2.4 59 42-100 7-70 (267)
289 PF13000 Acatn: Acetyl-coenzym 25.2 8.1E+02 0.018 25.7 13.2 67 314-380 401-469 (544)
290 PF05915 DUF872: Eukaryotic pr 25.0 3E+02 0.0065 22.4 6.3 60 349-423 40-99 (115)
291 PF01770 Folate_carrier: Reduc 24.5 7.5E+02 0.016 25.0 12.2 61 316-377 93-153 (412)
292 PF05631 DUF791: Protein of un 21.7 7.9E+02 0.017 24.3 13.6 110 235-377 72-187 (354)
293 PF05393 Hum_adeno_E3A: Human 20.2 1.2E+02 0.0026 23.2 2.9 32 399-431 33-64 (94)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-66 Score=529.89 Aligned_cols=409 Identities=44% Similarity=0.722 Sum_probs=366.9
Q ss_pred ChhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHH
Q 014067 1 MLFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTAT 80 (431)
Q Consensus 1 ~~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~ 80 (431)
+||.+|.++++|+|+.|||+.++++||+++.+++++.++.++|+|+|+.+|+|.+++.++..|++++.||.++|.+++++
T Consensus 154 ~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~ 233 (571)
T KOG1237|consen 154 VLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVL 233 (571)
T ss_pred HHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHH
Confidence 47899999999999999999999999999999989888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCC--CCCcc--cccCCCCCCCCCCCcc-cccccccCCCC
Q 014067 81 ILLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSK--NSSNA--VTEVHSSPTCSNESRD-EGNSNVKEKVP 155 (431)
Q Consensus 81 ~~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~--~~~~~--~~~~~~~l~~~~~~~~-~~a~~~~~~~~ 155 (431)
|++++++|+.|.+.|++++|.++|++.+.+|++.+.++++... +++++ ...+.....+++.+++ |++++..+.+.
T Consensus 234 ~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~ 313 (571)
T KOG1237|consen 234 NALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFKRKAVVSLDPEELYYDCTDSVAIEGTKPFRFLDKAALKTSDDL 313 (571)
T ss_pred HHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHHHhccCCCcchhccccccccccccCCcccchhhHhhccCCccc
Confidence 9999999999999999999999999999999999999987654 21111 1111122334556677 88877543220
Q ss_pred CCCCchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCC-cccCC
Q 014067 156 SQKPTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGS-LKVPP 234 (431)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg-~~ip~ 234 (431)
.++...++|+.|++++|||+|.++|++|+|...++||+++.|+.|.++.|+.+||+++++ +++|+
T Consensus 314 --------------~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~ 379 (571)
T KOG1237|consen 314 --------------KDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPA 379 (571)
T ss_pred --------------ccccccCCccCCCceehhhhhhhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCc
Confidence 122234789999999999999999999999999999999999999999999999999987 99999
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++++.+..+.++++.|+++++.+|+.||.+++|++.++++|+++|+++..++|..++.+|.+|++.+.+ +....++
T Consensus 380 asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~----~~~~~~~ 455 (571)
T KOG1237|consen 380 ASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVS----LLVETNP 455 (571)
T ss_pred hhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhh----ccCCCCC
Confidence 999999999999999999999999999999887789999999999999999999999999999988765 1122368
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcC-CC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFG-SN 393 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~-~~ 393 (431)
+|++||+|||+++|+||+|.+++++||+|+|||++||++.+++|+++.++|++++..+++++...|++ ..+|+ + +|
T Consensus 456 mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~--~~~w~-~~~~ 532 (571)
T KOG1237|consen 456 MSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFSTGK--AAEWL-GFAN 532 (571)
T ss_pred eeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcccC-ChhH
Confidence 99999999999999999999999999999999999999999999999999999999999999988753 35799 8 99
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhhccccccCC
Q 014067 394 LNHYHLERFYWLMCILGGLNFLHFLFWAARYKYSSTG 430 (431)
Q Consensus 394 ~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~~~~~ 430 (431)
+|++|+|+|||+++.++.++.+.|.+++++|++|..+
T Consensus 533 ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 533 LNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred hhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 9999999999999999999999999999999998765
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-52 Score=411.47 Aligned_cols=361 Identities=19% Similarity=0.305 Sum_probs=281.1
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+|++|++|++|+|++|||++++++|||+++|| |||.+|++||+++|+|++++|++++++++++||+.+|.+++++|
T Consensus 120 l~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp----rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm 195 (498)
T COG3104 120 LYIGLALIIVGTGLFKPNISSLLGELYPKDDP----RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGM 195 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHhcCCCCc----ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 78999999999999999999999999999998 68999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcceeecC--CCCCchhH------HHHHHHHHHHh--hcCCCCCCcccccCCCCCCCCCCCcc--ccccc
Q 014067 82 LLSIPIFLLGSPFYRNKI--PTGSPLTT------IFKVLTAAIFN--TCKSKNSSNAVTEVHSSPTCSNESRD--EGNSN 149 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~--p~~~~~~~------~~~v~~~a~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~--~~a~~ 149 (431)
.+++++|++++|++.+.+ |+.+|... ...++.....- .... ..+..+. ....+
T Consensus 196 ~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------------~~~~~~~~~~~~~i 260 (498)
T COG3104 196 IIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLL---------------NQNTFSGVLLVISI 260 (498)
T ss_pred HHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHH
Confidence 999999999999987643 33333321 00111100000 0000 0000000 00000
Q ss_pred ccCCCCCCCCchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHH-HHhccCCC
Q 014067 150 VKEKVPSQKPTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQA-ATMNTKLG 228 (431)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~-~~~~~~~g 228 (431)
.. ...+.-+. ..+ +..+ +|+||+++++++++..++||++|+|++|++..++ +++|++..
T Consensus 261 ~~----------~~~~~~~~------~~~---~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~ 320 (498)
T COG3104 261 LI----------AIIYFAEA------FRS---PKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIF 320 (498)
T ss_pred HH----------HHHHHHHH------hcc---CccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccc
Confidence 00 00000000 001 1233 7899999999999999999999999999998776 78888856
Q ss_pred CcccCCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 014067 229 SLKVPPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVN 308 (431)
Q Consensus 229 g~~ip~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~ 308 (431)
|+++|++|+|++||+++++++|+++++|+|+.++. + +++++.|+++|+++++++++++....... +.
T Consensus 321 g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~-~---~ps~~~KFalGl~l~g~~fl~l~~~~~~~---~~------ 387 (498)
T COG3104 321 GFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN-K---QPSTPIKFALGLILAGLGFLILLLAGIWF---GG------ 387 (498)
T ss_pred ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC-C---CCCcchHHHHHHHHHHHHHHHHHHHHHhh---cC------
Confidence 79999999999999999999999999999988764 2 38999999999999999999988875321 11
Q ss_pred CCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCC
Q 014067 309 SSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPW 388 (431)
Q Consensus 309 ~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w 388 (431)
+...+|++|++++|+++++||+|++|+++|+++++||++++|.+||+|+++.+.|+.+++.+.+.... +
T Consensus 388 --~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~-~-------- 456 (498)
T COG3104 388 --PSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAV-T-------- 456 (498)
T ss_pred --CCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccc-c--------
Confidence 12469999999999999999999999999999999999999999999999999999999988774321 1
Q ss_pred CcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 014067 389 LFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYKYS 427 (431)
Q Consensus 389 ~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~~ 427 (431)
-+-.+..+...+|+.++.+.++..++....+++.++-
T Consensus 457 --~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~r~ 493 (498)
T COG3104 457 --DPAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLNRM 493 (498)
T ss_pred --chhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHHHh
Confidence 0111223345679999999999999988888887654
No 3
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=4.5e-43 Score=355.86 Aligned_cols=363 Identities=13% Similarity=0.116 Sum_probs=265.9
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+++++.++++|.|.++||.+++++|+|+++|+ +|+++|+++|+++|+|++++|++++++.+++||+.+|.+++++|
T Consensus 103 ~~l~l~li~iG~G~~~~~~~alv~elfp~~~~----~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm 178 (493)
T PRK15462 103 LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP----RRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGM 178 (493)
T ss_pred HHHHHHHHHHhcccccccHHHHHHHHCCCCCc----cccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHH
Confidence 35677788899999999999999999988765 57889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcceeecCC-CCCchhH--HHHHHH-----H-----HHHhhcCCCCCCcccccCCCCCCCCCCCcc--cc
Q 014067 82 LLSIPIFLLGSPFYRNKIP-TGSPLTT--IFKVLT-----A-----AIFNTCKSKNSSNAVTEVHSSPTCSNESRD--EG 146 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p-~~~~~~~--~~~v~~-----~-----a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~ 146 (431)
++++++++.++|++.+..+ +.+|.++ ...... . ....... . ...... -.
T Consensus 179 ~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~~~~~ 242 (493)
T PRK15462 179 IAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLF---------------W-KEWSVYALIV 242 (493)
T ss_pred HHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHH---------------H-HHHHHHHHHH
Confidence 9999999998887754211 1122211 000000 0 0000000 0 000000 00
Q ss_pred cccccCCCCCCCCchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHH-HHhcc
Q 014067 147 NSNVKEKVPSQKPTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQA-ATMNT 225 (431)
Q Consensus 147 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~-~~~~~ 225 (431)
..+. . --++.. ... .+ ...+|+||+..++++++..++||+.|+|.++++.+.+ +++|+
T Consensus 243 ~~~~-~---------~~~~~~---------~~~-~~-~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~ 301 (493)
T PRK15462 243 ATII-G---------LGVLAK---------IYR-KA-ENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNR 301 (493)
T ss_pred HHHH-H---------HHHHHH---------HHH-hc-CCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccc
Confidence 0000 0 000000 000 01 1236799999999999999999999999999996655 89999
Q ss_pred CCCCcccCCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 014067 226 KLGSLKVPPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSG 305 (431)
Q Consensus 226 ~~gg~~ip~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g 305 (431)
+++|+++|++|+|++||++++++.|++.++|.++.+|. + +++.++|+++|+++.++|++++.+.... +..
T Consensus 302 ~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~-~---~~s~~~Kfa~g~~~~g~~f~~l~~~~~~----~~~-- 371 (493)
T PRK15462 302 DMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGN-R---TVRIWGKFALGLGLMSAGFCILTLSARW----SAM-- 371 (493)
T ss_pred hhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCC-C---CCCcHHHHHHHHHHHHHHHHHHHHHHhh----cCC--
Confidence 99999999999999999999999999999998886542 2 3899999999999999999999887521 111
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHH-HHHHHHhhhhhhhhccccccCC
Q 014067 306 LVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASL-AMGYYFSTVLVSIVNNITSTYR 384 (431)
Q Consensus 306 ~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~-~iG~~l~~~l~~~~~~~~~~~~ 384 (431)
...+|++|++..|+++|+||++++|.++++++++||++++|++||+|++.. ++|+.+++.+.+.....+.
T Consensus 372 ------~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~--- 442 (493)
T PRK15462 372 ------YGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASF--- 442 (493)
T ss_pred ------CCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC---
Confidence 125899999999999999999999999999999999999999999999955 8999999999888742110
Q ss_pred CCCCCcCCC---CCcchhhHHHHHHHHHHHHH--HHHHHHHhhccccccC
Q 014067 385 HTPWLFGSN---LNHYHLERFYWLMCILGGLN--FLHFLFWAARYKYSST 429 (431)
Q Consensus 385 ~~~w~~~~~---~n~~~l~~~f~~la~l~~v~--~i~~~~~~~~~~~~~~ 429 (431)
+ ++. -...++..+|..++.++++. .+++..+-+..|+|.|
T Consensus 443 -~----~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (493)
T PRK15462 443 -D----ASGAINYSINAYIEVFDQITWGALACVGVVLMIWLYQALKFRNR 487 (493)
T ss_pred -C----ccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 0 100 01124556788888766655 4444555555565554
No 4
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=100.00 E-value=3.2e-42 Score=360.59 Aligned_cols=356 Identities=22% Similarity=0.442 Sum_probs=290.7
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccccc-------CchhHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNK-------GWQWGF 74 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~-------g~~~~F 74 (431)
++++|+++++|+|++|||++++++|||+++++ ++++++|+|||+++|+|+++++++++++++++ ||+++|
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF 164 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAF 164 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHH
Confidence 57899999999999999999999999986543 36899999999999999999999999998553 699999
Q ss_pred HHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcc-cccccccCC
Q 014067 75 GISTATILLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRD-EGNSNVKEK 153 (431)
Q Consensus 75 ~i~~i~~~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~ 153 (431)
++++++|++++++|..++|+|++.+|.++++.++.++++.+++++....+ .+ ...+| |.+...
T Consensus 165 ~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~------------~~-~~~~~ld~a~~~--- 228 (654)
T TIGR00926 165 GVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRS------------EH-WPLHWLDYAKDK--- 228 (654)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCC------------cc-cchhHHHHhccc---
Confidence 99999999999999999999988888888888888888888776532210 00 00122 222110
Q ss_pred CCCCCCchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccC
Q 014067 154 VPSQKPTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVP 233 (431)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip 233 (431)
...+++||+|++++++++++..++||+.++|+.|++..|+++||++++++++|
T Consensus 229 ---------------------------~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~~l~g~~ip 281 (654)
T TIGR00926 229 ---------------------------HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDGDVGGFEIQ 281 (654)
T ss_pred ---------------------------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcCccCCEecC
Confidence 12456899999999999999999999999999999999999999998899999
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhh------------
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVA------------ 301 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~------------ 301 (431)
+++++++|++.++++.|+++..++|.++|++.+ +++++|+++|++++++++++++++|.+++...
T Consensus 282 ~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~---ls~l~k~~iG~~la~la~~va~~ve~~~~~~~~~~~~~~~~~~~ 358 (654)
T TIGR00926 282 PDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQLKVNPTLPEEPSANEIFLQ 358 (654)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCcceEEE
Confidence 999999999999999999998888988876443 79999999999999999999999996442110
Q ss_pred -------------------------------------------h--------------------------h----c-C--
Q 014067 302 -------------------------------------------V--------------------------N----S-G-- 305 (431)
Q Consensus 302 -------------------------------------------~--------------------------~----~-g-- 305 (431)
. + . +
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (654)
T TIGR00926 359 VLNTDCTICDFSVLSKRVLPHDVYLHLDKKNTSGDQGLFTTKSSAKGWTLTYDLSYDGACGLTGNCPKTTDAHELEPKIS 438 (654)
T ss_pred EecCCCCcceEEEEecCCcccccccccCccccccccccccccccccccceEEEEeccccccccCCCCccccceeecCCce
Confidence 0 0 0 0
Q ss_pred ---------C----------------------------------------------------------------------
Q 014067 306 ---------L---------------------------------------------------------------------- 306 (431)
Q Consensus 306 ---------~---------------------------------------------------------------------- 306 (431)
.
T Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (654)
T TIGR00926 439 YVLLLSQGGYQLTANTDKPTDAKTEKGMGSVRLVNTLNGEFGMISLCTSDSDSVTPCNPRDPYDFYFRGTKYPANTCDRI 518 (654)
T ss_pred EEEEEecCCcceeeeeecCccCCCCCCCceEEEEecCCCcceeeEEecccCcccccCCcccccccccccceeeeeecccc
Confidence 0
Q ss_pred ----------------------C-CCC--C-----------CcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchh
Q 014067 307 ----------------------V-NSS--E-----------PLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSM 350 (431)
Q Consensus 307 ----------------------~-~~~--~-----------~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~ 350 (431)
+ ++. + ..++|++||+|||++.++||++.+++++|+.+++||++|
T Consensus 519 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~m 598 (654)
T TIGR00926 519 DNAKSSTFLSNQLDMGIYYLIVITENSKIDELQAQIVELVSVNTVSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNM 598 (654)
T ss_pred cccccccccccccccceEEEEEEcCCCCCCcceeEEEEecCCCceeHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHH
Confidence 0 000 0 123889999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcc
Q 014067 351 RSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARY 424 (431)
Q Consensus 351 ~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~ 424 (431)
|+..+++|.++.++|+.+...+...-. .. .+| .-|.+.+.++++..++|.++++.|
T Consensus 599 ks~~~a~~~~~~~~g~~~~~~~~~~~~-~~-----~~~------------~~~~~~~~~~~~~~~~f~~~a~~Y 654 (654)
T TIGR00926 599 KSVLQALWLLTVAIGNLIVVVIAEFEN-FS-----VQA------------AEFFLFASLMLVVMAIFSILAYFY 654 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-Ch-----HHH------------HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999877654321 10 122 247778889999999999998765
No 5
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=100.00 E-value=2.9e-43 Score=350.28 Aligned_cols=328 Identities=32% Similarity=0.510 Sum_probs=232.3
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+|+||+++++|+|++|||++++++|||+++++ ++++++|+||||++|+|+++++++++++++++||+++|++++++|
T Consensus 36 ~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~---~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~ 112 (372)
T PF00854_consen 36 FYIGLALIAVGTGGIKPNISPFGADQYDEDDD---SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGM 112 (372)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT---THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccccHHHHHHHHhcccch---hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHH
Confidence 79999999999999999999999999998742 378999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcceeec-CCCCCchhH-HHHHHHHHHHhhcCCCCCCc---ccccCCCCCCCCCCCcc-cccccccCCCC
Q 014067 82 LLSIPIFLLGSPFYRNK-IPTGSPLTT-IFKVLTAAIFNTCKSKNSSN---AVTEVHSSPTCSNESRD-EGNSNVKEKVP 155 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~-~p~~~~~~~-~~~v~~~a~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~-~~a~~~~~~~~ 155 (431)
++++++|+.++++|++. +|.+++..+ ...++..+.+++........ ................. .++.......
T Consensus 113 ~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 191 (372)
T PF00854_consen 113 LLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLVAAFKKRKLAVPKGSSWLDWALFQYSERSIFGIIVFIRAAVIFFPE- 191 (372)
T ss_dssp HHHHHHHHCCCCTT--S-----S--S--SHHHHHHHHHHHCCCH-HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC-
T ss_pred HHHHHHHHhCCcCCcCcCccCCcccchhHHHHHHHHHHHhhcccccchHHHHHhhhhhhhhhhhhhhhhccchhhhhhh-
Confidence 99999999999999887 677888777 44555555555543220000 00000000000000000 0000000000
Q ss_pred CCCCchhHHHHhhhccCCCCCCcc-ccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCC-cccC
Q 014067 156 SQKPTEDIKFLNRALRNNPAYPIV-QCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGS-LKVP 233 (431)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg-~~ip 233 (431)
...|. .++++++|+.|.+.+.++.+...++|+.++.|..+....|.+++|+.+++ +++|
T Consensus 192 -------------------~~~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip 252 (372)
T PF00854_consen 192 -------------------IFFWALFCQVQRVEELKALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIP 252 (372)
T ss_dssp -------------------HHHHTTTSSTTTHHHCCHHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------
T ss_pred -------------------hhhcccCCccceeeeeeeeeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccc
Confidence 00011 13566788889999999999999999999999887778888899888888 9999
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
+++++++|+++++++.|+++++++|+.|+ +++ +++++|+++|++++.+++++++.+|.+|...+.+.|
T Consensus 253 ~~~l~~~n~i~iii~~pi~~~~~~p~~~~-~~~---~~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~-------- 320 (372)
T PF00854_consen 253 PAWLQSFNPIFIIIFIPILDRVVYPLLRR-GIQ---PSPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCG-------- 320 (372)
T ss_dssp SGGGTTHHHHHCHHHHHHHHHHCCCTTTT----------HHHHHHH-HHHHHHHHTTTHHHH---HH----T--------
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhHHhhh-ccc---chhhhhhhHHHHHHHHHHHHHHHHHhhhhhcccccC--------
Confidence 99999999999999999999999999984 222 899999999999999999999999988776655444
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHH
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAM 364 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~i 364 (431)
..+.+|+++.|++++++|+++++++.+.+++.+|+++++.++|+|+...+.
T Consensus 321 ~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~~~~~~ 371 (372)
T PF00854_consen 321 KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWFALSAF 371 (372)
T ss_dssp T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHHHHH--
T ss_pred CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHHHHhcc
Confidence 466699999999999999999999999888889988888888888887653
No 6
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=3.2e-38 Score=323.96 Aligned_cols=365 Identities=13% Similarity=0.174 Sum_probs=269.8
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++++++++|+|+++||.+++++|+|+++++ ||++.|+++|+++|+|+++||.++|++.+++||+++|.++++++
T Consensus 108 l~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~----~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~ 183 (489)
T PRK10207 108 IFIALGTIAVGNGLFKANPASLLSKCYPPKDP----RLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGL 183 (489)
T ss_pred HHHHHHHHHhccccccCCHHHHHHHhcCCCch----hhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHH
Confidence 45788999999999999999999999987653 56789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcceeec--CCCCCchh--HHHHHH------HHHHHhhcCCCCCCcccccCCCCCCCCCCCcc--ccccc
Q 014067 82 LLSIPIFLLGSPFYRNK--IPTGSPLT--TIFKVL------TAAIFNTCKSKNSSNAVTEVHSSPTCSNESRD--EGNSN 149 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~--~p~~~~~~--~~~~v~------~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~a~~ 149 (431)
.++++.+..+++++++. +|++++.. ...... ........ . +...... ....+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~~~ 247 (489)
T PRK10207 184 IIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLM-H---------------NVEVANLVLIVLSI 247 (489)
T ss_pred HHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHH-h---------------hhhHHHHHHHHHHH
Confidence 99998888888777553 23333321 111000 00000000 0 0000000 00000
Q ss_pred ccCCCCCCCCchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHH-HhccCCC
Q 014067 150 VKEKVPSQKPTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAA-TMNTKLG 228 (431)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~-~~~~~~g 228 (431)
. ....+..+ ..+.++ .++++.+..+++++..++||.+++|..+.++++.+ ++|++..
T Consensus 248 i----------~~~~f~~~-----------~~~~~~-~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~ 305 (489)
T PRK10207 248 V----------VTIIFFRE-----------AFKLDK-TGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEIL 305 (489)
T ss_pred H----------HHHHHHHH-----------HhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhcccccc
Confidence 0 00011110 001122 44677777888888999999999999988877775 6888877
Q ss_pred CcccCCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 014067 229 SLKVPPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVN 308 (431)
Q Consensus 229 g~~ip~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~ 308 (431)
|+.+|++++|++|++.++++.|+.++++.++.+|. . ++++++|+++|+++.++++++++..+... +..
T Consensus 306 G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~-~---~~~~~~k~~~G~~l~~~~~~~~~~~~~~~---~~~----- 373 (489)
T PRK10207 306 GFSINPVSFQALNPFWVVVASPILAGIYTHLGSKG-K---DLSMPMKFTLGMFLCSLGFLTAAAAGMWF---ADA----- 373 (489)
T ss_pred ceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCC-C---CCCcHHHHHHHHHHHHHHHHHHHHHHHhh---cCC-----
Confidence 99999999999999999999999999887775542 2 38999999999999999998876654211 100
Q ss_pred CCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCC
Q 014067 309 SSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPW 388 (431)
Q Consensus 309 ~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w 388 (431)
...+|+||+++.|++.|+||.+.+|++++++++.+|++++|.+||+|++..++|+.+|+.+++.+..... ..
T Consensus 374 ---~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~-----~~ 445 (489)
T PRK10207 374 ---QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDN-----IT 445 (489)
T ss_pred ---CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----cc
Confidence 1247899999999999999999999999999999999999999999999999999999999887742110 00
Q ss_pred CcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccccCC
Q 014067 389 LFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYKYSSTG 430 (431)
Q Consensus 389 ~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~~~~~ 430 (431)
. |.+ .++.+..+|..+++.+++..++++++.|++++.-.+
T Consensus 446 ~-~~~-~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~ 485 (489)
T PRK10207 446 D-PLE-TLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRMINT 485 (489)
T ss_pred c-chh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0 100 123467889999999999999999999888775443
No 7
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=5.7e-38 Score=321.67 Aligned_cols=352 Identities=16% Similarity=0.191 Sum_probs=264.6
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+++++.++++|.|+++|+.+++++|+++++++ .+|+++|+++|++.|+|+++||++++++.+++||+++|.++++++
T Consensus 105 ~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~---~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~ 181 (475)
T TIGR00924 105 IFYGLGTIAVGSGLFKANPSSMVGKLYERGDM---PRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGM 181 (475)
T ss_pred HHHHHHHHHhccccccCCHHHHHHHhcCCCCc---ccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 45678889999999999999999999987653 247789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcceeecCCCCCchhHH-----HH--HH----HHHHHhhcCCCCCCcccccCCCCCCCCCCCcc-----c
Q 014067 82 LLSIPIFLLGSPFYRNKIPTGSPLTTI-----FK--VL----TAAIFNTCKSKNSSNAVTEVHSSPTCSNESRD-----E 145 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p~~~~~~~~-----~~--v~----~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~ 145 (431)
+++++++++.++.+++.++++++.+.. .+ .+ ....+...... +....+. .
T Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~ 247 (475)
T TIGR00924 182 VIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMH--------------HVVIANILLMTVT 247 (475)
T ss_pred HHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHh--------------ccHHHHHHHHHHH
Confidence 999888888888876544333332110 00 00 00000000000 0000000 0
Q ss_pred ccccccCCCCCCCCchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHH-HHHHHhc
Q 014067 146 GNSNVKEKVPSQKPTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSV-QQAATMN 224 (431)
Q Consensus 146 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~-~~~~~~~ 224 (431)
.+... ++.+.. . .+ +.++ +++++..+++++++..++||++|+|+.+++. ++++++|
T Consensus 248 ~~~~~-------------~~~~~~-~----~~----~~~~-~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~ 304 (475)
T TIGR00924 248 LAVII-------------FFFRLA-F----KP----RLDA-VARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMH 304 (475)
T ss_pred HHHHH-------------HHHHHH-H----hc----cCCH-HHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcc
Confidence 00000 000000 0 00 1122 3455667789999999999999999999885 4567899
Q ss_pred cCCCCcccCCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 014067 225 TKLGSLKVPPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNS 304 (431)
Q Consensus 225 ~~~gg~~ip~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~ 304 (431)
++++++++|+++++++|++.+++++|+++++|.++.|| +++ ++...|+++|+++.+++++.++++.. .+++
T Consensus 305 ~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~-~~~---~~~~~k~~~G~~l~~~~~~~~~~~~~----~~~~- 375 (475)
T TIGR00924 305 HEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRK-GKD---PTTPLKFTLGMLFCGASFLTFAASIW----FADA- 375 (475)
T ss_pred ccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhC-CCC---CCcHHHHHHHHHHHHHHHHHHHHHHh----hcCC-
Confidence 99889999999999999999999999999988777665 222 78889999999999999999887631 1111
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCC
Q 014067 305 GLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYR 384 (431)
Q Consensus 305 g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~ 384 (431)
..++|+||++++|+++|+||++++|++++++++++|+++||+++|+|.+..++|+.+++.+.+......
T Consensus 376 -------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~---- 444 (475)
T TIGR00924 376 -------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ---- 444 (475)
T ss_pred -------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----
Confidence 136899999999999999999999999999999999999999999999999999999999987653211
Q ss_pred CCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 014067 385 HTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 385 ~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
+| ..+|..+++++++.+++++++.|+.++
T Consensus 445 --~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~k 473 (475)
T TIGR00924 445 --GV-----------TGVFGKIGLVTLLVGVVMALMVPWLNR 473 (475)
T ss_pred --ch-----------hhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12 357888888888888888888887764
No 8
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=7.8e-37 Score=315.04 Aligned_cols=360 Identities=13% Similarity=0.212 Sum_probs=263.2
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+++++.++++|.|+++|+.+++++++|+++++ +++++++++|+++|+|+++||++++++.+++||+++|.++++.+
T Consensus 115 l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~----~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~ 190 (500)
T PRK09584 115 VYMGMATIAVGNGLFKANPSSLLSTCYEKDDP----RLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGM 190 (500)
T ss_pred HHHHHHHHHHhhhcccCCHHHHHHHhcCCCch----hhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 45678889999999999999999999986643 46678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcceeec--CCCCCchhH--HH----HHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCC
Q 014067 82 LLSIPIFLLGSPFYRNK--IPTGSPLTT--IF----KVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEK 153 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~--~p~~~~~~~--~~----~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~ 153 (431)
+++++.+++.++.+++. +|+++|... .. .+........... .+.+. .+......
T Consensus 191 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~--~~~~~~~~-- 252 (500)
T PRK09584 191 LITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLL--------------HNQEI--ARMALGVV-- 252 (500)
T ss_pred HHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHH--------------hcchH--HHHHHHHH--
Confidence 99988887777666543 233333211 00 0000000000000 00000 00000000
Q ss_pred CCCCCCchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHH-HHhccCCCCccc
Q 014067 154 VPSQKPTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQA-ATMNTKLGSLKV 232 (431)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~-~~~~~~~gg~~i 232 (431)
+.. ...... ...+..++ +|+++.+..+++++..++||+++.|+++.+..|+ +++|++++|+.+
T Consensus 253 ------~~~-~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i 316 (500)
T PRK09584 253 ------ALG-IVVIFG--------KEAFAMKG-AARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAV 316 (500)
T ss_pred ------HHH-HHHHHH--------HHHhhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEE
Confidence 000 000000 00011222 4567777888888999999999999999988876 567888888999
Q ss_pred CCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Q 014067 233 PPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEP 312 (431)
Q Consensus 233 p~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~ 312 (431)
|++++|++|++.+++++|+.++++.++.+| +++.+|+++|+++.+++++.+++... .+++ .
T Consensus 317 ~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-------~~~~~~~~~G~~l~~l~f~~l~~~~~----~~~~--------~ 377 (500)
T PRK09584 317 EPEQYQALNPFWIMIGSPILAAIYNKMGDR-------LPMPHKFAIGMVLCSGAFLVLPLGAK----FAND--------A 377 (500)
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-------CCcHHHHHHHHHHHHHHHHHHHHHHH----hcCC--------C
Confidence 999999999999999999999988776544 57889999999999999999887652 1111 1
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCC
Q 014067 313 LPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGS 392 (431)
Q Consensus 313 ~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~ 392 (431)
..+|++|++++|+++|+||++++|.+++++++++|+++||++||+|+++.++|+.+++.+.+.+..-.. . .|
T Consensus 378 ~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~-------~-~~ 449 (500)
T PRK09584 378 GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDN-------V-TD 449 (500)
T ss_pred CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-------c-cc
Confidence 368999999999999999999999999999999999999999999999999999999999876541000 0 11
Q ss_pred CC-CcchhhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 014067 393 NL-NHYHLERFYWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 393 ~~-n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
.. ..+.+..+|..+++++++.+++++++.++.++
T Consensus 450 ~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k 484 (500)
T PRK09584 450 PLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNR 484 (500)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11235678888998888888888888887765
No 9
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.46 E-value=4.5e-12 Score=127.52 Aligned_cols=291 Identities=13% Similarity=0.095 Sum_probs=170.5
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.+++.|.+.|+..+.+.|.++++ +|.+++++.+...++|..+||.+++++. ++||+..|.+.++..
T Consensus 102 l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~ 174 (400)
T PRK11646 102 LWLSCILSGLGGTLFDPPRTALVIKLIRPH------QRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLF 174 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHH
Confidence 456677788888889999999999988643 4678999999999999999999999998 689999999988877
Q ss_pred HHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCch
Q 014067 82 LLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTE 161 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~ 161 (431)
++..++.....+.. ++ ++..+. . ++
T Consensus 175 ~~~~i~~~~~~~~~---~~--~~~~~~---~----~~------------------------------------------- 199 (400)
T PRK11646 175 VLAAAFNAWLLPAY---KL--STVRTP---V----RE------------------------------------------- 199 (400)
T ss_pred HHHHHHHHHhCCcc---cc--cccchh---h----HH-------------------------------------------
Confidence 76654433322211 00 000000 0 00
Q ss_pred hHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCCCCcCchh
Q 014067 162 DIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPPASLPVFP 241 (431)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~~~l~~~n 241 (431)
.++ +-.+++ +... +.+....++..+.|.....+...++ . ++.....+++.+++
T Consensus 200 ---------------~~~----~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~---~-~~~~~~~g~l~~~~ 252 (400)
T PRK11646 200 ---------------GMT----RVLRDK-RFVT---YVLTLTGYYMLAVQVMLMLPIMVND---I-AGSPSAVKWMYAIE 252 (400)
T ss_pred ---------------HHH----HHHcCc-hHHH---HHHHHHHHHHHHHHHHHhhhhhHHh---h-cCCchHHHHHHHHH
Confidence 000 000111 1111 1111222333333322112221111 1 11001122333444
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHH
Q 014067 242 VIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVA 321 (431)
Q Consensus 242 ~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli 321 (431)
.+..+.......++ ..|+ .+..+++..|.++.++++...+..+ +.++.+
T Consensus 253 ~~~~~~~~~~~~~~----~~~r------~~~~~~~~~~~~~~~~~~~~l~~~~---------------------~~~~~~ 301 (400)
T PRK11646 253 ACLSLTLLYPIARW----SEKR------FRLEHRLMAGLLIMSLSMFPIGMVS---------------------NLQQLF 301 (400)
T ss_pred HHHHHHHHHHHHHH----HHHh------cchhHHHHHHHHHHHHHHHHHHHhh---------------------hHHHHH
Confidence 44333333222332 2221 2333457777777777766554432 233444
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhH
Q 014067 322 LQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLER 401 (431)
Q Consensus 322 ~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~ 401 (431)
...++.++++.+..|.....+.+.+|++.+|..+|++.+..++|..+|+.+.+.+.+.++.. +....
T Consensus 302 ~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~-------------~~~~~ 368 (400)
T PRK11646 302 TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKAL-------------NQPEL 368 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhc-------------CCcch
Confidence 55677889999999999999999999999999999999999999999999998886443100 01123
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccc
Q 014067 402 FYWLMCILGGLNFLHFLFWAARYK 425 (431)
Q Consensus 402 ~f~~la~l~~v~~i~~~~~~~~~~ 425 (431)
.|++.++++++..+.+....|+.|
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~ 392 (400)
T PRK11646 369 PWMMLGIIGLITLLALYWQFSQKR 392 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhch
Confidence 456666666666666554444443
No 10
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.42 E-value=4.5e-11 Score=120.02 Aligned_cols=81 Identities=19% Similarity=0.317 Sum_probs=67.9
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.+++.|...|...+.+.|.++++ +|..++++++.+.++|.++++.+++.+.+..+|+..|.+.++..
T Consensus 106 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (406)
T PRK11551 106 LLVARLLTGVGLGGALPNLIALTSEAVGPR------LRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGP 179 (406)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 356677888999999999999999999643 36778999999999999999999999989899999999888766
Q ss_pred HHHHHHH
Q 014067 82 LLSIPIF 88 (431)
Q Consensus 82 ~i~~iif 88 (431)
++..++.
T Consensus 180 ~~~~~~~ 186 (406)
T PRK11551 180 LLLVPLL 186 (406)
T ss_pred HHHHHHH
Confidence 6655433
No 11
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.40 E-value=7.3e-11 Score=116.68 Aligned_cols=83 Identities=17% Similarity=0.249 Sum_probs=70.6
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.++|.|...|...+.+.|.++++ +|.+.++++..+.++|.++++.+++++.++.+|++.|.+.++..
T Consensus 85 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 158 (399)
T TIGR00893 85 LYILRVLLGAAEAPFFPGIILIVASWFPAS------ERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLG 158 (399)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhCCHH------HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 466778899999999999999999998643 46778999999999999999999999989999999999988877
Q ss_pred HHHHHHHHh
Q 014067 82 LLSIPIFLL 90 (431)
Q Consensus 82 ~i~~iif~~ 90 (431)
++..++..+
T Consensus 159 ~~~~~~~~~ 167 (399)
T TIGR00893 159 IIWGVLWLK 167 (399)
T ss_pred HHHHHHhhh
Confidence 766554433
No 12
>PRK03545 putative arabinose transporter; Provisional
Probab=99.39 E-value=6.7e-11 Score=118.36 Aligned_cols=279 Identities=11% Similarity=0.085 Sum_probs=163.2
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.+++.+.+.|...+++.|+++++ +|.++++++..+.++|.+++|.+++.+.+++||++.|.+.++..
T Consensus 100 l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~ 173 (390)
T PRK03545 100 LLISRIGIAFAHAIFWSITASLAIRVAPAG------KKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGA 173 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChh------hhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHH
Confidence 456677888888888899999999999754 36778999999999999999999999999899999999988877
Q ss_pred HHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCch
Q 014067 82 LLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTE 161 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~ 161 (431)
++..+......++ +|++++. . .+ +
T Consensus 174 ~l~~~~~~~~~~~----~~~~~~~-~-~~----------------------------------~---------------- 197 (390)
T PRK03545 174 LITLLLLIKLLPL----LPSEHSG-S-LK----------------------------------S---------------- 197 (390)
T ss_pred HHHHHHHHHhCCC----CCCCCcc-h-HH----------------------------------H----------------
Confidence 6665433332211 1111000 0 00 0
Q ss_pred hHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCC---CCcC
Q 014067 162 DIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPP---ASLP 238 (431)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~---~~l~ 238 (431)
+ . +-.++ +.+... +.........+....+....... + ..| .++ +.+.
T Consensus 198 ----------------~---~-~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~--~-~~g---~s~~~~~~~~ 247 (390)
T PRK03545 198 ----------------L---P-LLFRR-PALVSL---YLLTVVVVTAHFTAYSYIEPFVQ--Q-VAG---LSENFATLLL 247 (390)
T ss_pred ----------------H---H-HHHhC-cHHHHH---HHHHHHHHHHHHHHHHHHHHHHH--H-hcC---CCccHHHHHH
Confidence 0 0 00000 111111 11111111111111111111111 1 112 122 2333
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHH
Q 014067 239 VFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFL 318 (431)
Q Consensus 239 ~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~ 318 (431)
....+..++..++.+++ .+|. . .+++.++..+.++++...... ..+.+
T Consensus 248 ~~~~~~~~~g~~~~g~l----~dr~-------~-~~~~~~~~~~~~~~~~~l~~~--------------------~~~~~ 295 (390)
T PRK03545 248 LLFGGAGIIGSVLFSRL----GNRH-------P-SGFLLIAIALLLVCLLLLLPA--------------------ANSEW 295 (390)
T ss_pred HHHHHHHHHHHHHHHHH----hhcc-------c-hhHHHHHHHHHHHHHHHHHHH--------------------hchHH
Confidence 34444444554444443 3331 1 234555665555554433222 12455
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcch
Q 014067 319 WVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYH 398 (431)
Q Consensus 319 wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~ 398 (431)
+++...++.|++.....+...+.+.+.+|+ .++.++|++.....+|..+|+.+++.+.+..+
T Consensus 296 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g----------------- 357 (390)
T PRK03545 296 HLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-ATDVAMALFSGIFNIGIGAGALLGNQVSLHLG----------------- 357 (390)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----------------
Confidence 666778889999988888888888888875 78999999998889999999999887752211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhh
Q 014067 399 LERFYWLMCILGGLNFLHFLFWAA 422 (431)
Q Consensus 399 l~~~f~~la~l~~v~~i~~~~~~~ 422 (431)
+...|+..+++.+++++++....|
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 358 LSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcc
Confidence 124467777777777777665554
No 13
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.39 E-value=3.2e-11 Score=120.95 Aligned_cols=298 Identities=13% Similarity=0.114 Sum_probs=167.3
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.+++.+ +.|...+...|+++++ +|....+++..+.++|.+++|.+.+++.+..+|+..|.+.++..
T Consensus 110 ~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (408)
T PRK09874 110 FLILRALLGLLGG-FVPNANALIATQVPRN------KSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVL 182 (408)
T ss_pred HHHHHHHHHHhhh-hHHhHHHHHHHhcCHh------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 3455666777755 4577777888887543 35677888899999999999999999998899999999988877
Q ss_pred HHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCch
Q 014067 82 LLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTE 161 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~ 161 (431)
++..+..+...+.-. +|+.++..... + +.
T Consensus 183 ~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~---------------------------~~--------------- 211 (408)
T PRK09874 183 FLCFLVTLFCIRENF--QPVSKKEMLHM-------R---------------------------EV--------------- 211 (408)
T ss_pred HHHHHHHHHHhccCc--ccccchhhhHH-------H---------------------------HH---------------
Confidence 766554433221100 11100000000 0 00
Q ss_pred hHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCCCCcCchh
Q 014067 162 DIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPPASLPVFP 241 (431)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~~~l~~~n 241 (431)
++ ..++.+... .+......+........+.+.....+...+......-.+.+..+.
T Consensus 212 ----------------~~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 267 (408)
T PRK09874 212 ----------------VT-----SLKNPKLVL---SLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVP 267 (408)
T ss_pred ----------------HH-----hCcCCchHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 00 000011111 111111222222222222221111111111000000011122333
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHH
Q 014067 242 VIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVA 321 (431)
Q Consensus 242 ~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli 321 (431)
.+..++..|+.+++. +|. ...+-+..++++.+++++..... .+.+++.
T Consensus 268 ~l~~~~~~~~~g~l~----dr~-------g~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~ 315 (408)
T PRK09874 268 GVAALLSAPRLGKLG----DRI-------GPEKILITALIFSVLLLIPMSFV---------------------QTPLQLG 315 (408)
T ss_pred HHHHHHHHHHHHHHH----hcc-------ccchhHHHHHHHHHHHHHHHHHh---------------------ccHHHHH
Confidence 444445555555543 332 22233445555555444443322 1344455
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhH
Q 014067 322 LQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLER 401 (431)
Q Consensus 322 ~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~ 401 (431)
...++.++++....|.....+.+.+|++.+|..+|++.....+|..+|+.+++.+.+.. + ...
T Consensus 316 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~------g-----------~~~ 378 (408)
T PRK09874 316 ILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY------G-----------FRA 378 (408)
T ss_pred HHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc------c-----------hhH
Confidence 66678899999999999999999999999999999999999999999999988775211 1 224
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccCC
Q 014067 402 FYWLMCILGGLNFLHFLFWAARYKYSSTG 430 (431)
Q Consensus 402 ~f~~la~l~~v~~i~~~~~~~~~~~~~~~ 430 (431)
.|...+++.+++.++.....||.+.++.+
T Consensus 379 ~f~~~~~~~l~~~~~~~~~~~~~~~~~~~ 407 (408)
T PRK09874 379 VFLVTAGVVLFNAVYSWNSLRRRRIPQVS 407 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 57778888888887777666666655443
No 14
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.39 E-value=7.7e-11 Score=119.01 Aligned_cols=289 Identities=10% Similarity=-0.027 Sum_probs=161.9
Q ss_pred HHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHH
Q 014067 4 AGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILL 83 (431)
Q Consensus 4 ~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i 83 (431)
+...+.+++.|...|+..+.+.|.++++ ++.++.++++++.++|..+|+.+++++.+..||++.|.+.++..++
T Consensus 115 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~ 188 (417)
T PRK10489 115 LLGLWDGFFGSLGVTALLAATPALVGRE------NLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFI 188 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccCHH------HHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3444556777777788888888888643 3567788889999999999999999998888999999998887777
Q ss_pred HHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCchhH
Q 014067 84 SIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTEDI 163 (431)
Q Consensus 84 ~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~~~ 163 (431)
+.+.....++ .+|+..+..+..+-..
T Consensus 189 ~~~~~~~l~~----~~~~~~~~~~~~~~~~-------------------------------------------------- 214 (417)
T PRK10489 189 TLLPLLRLPA----LPPPPQPREHPLRSLL-------------------------------------------------- 214 (417)
T ss_pred HHHHHHhCCC----CCCCCcccccchHHHH--------------------------------------------------
Confidence 6554432211 1111000000000000
Q ss_pred HHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccC---CCCcCch
Q 014067 164 KFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVP---PASLPVF 240 (431)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip---~~~l~~~ 240 (431)
..+ ..+-..+.+ +. +++.... +.......+.++.. +....+ .+ .+++...
T Consensus 215 ------------~~~-----~~~~~~~~~-~~--~~~~~~~-~~~~~~~~~~~p~~---~~~~~g---~~~~~~g~~~~~ 267 (417)
T PRK10489 215 ------------AGF-----RFLLASPVV-GG--IALLGGL-LTMASAVRVLYPAL---ADEVWQ---MGAAQIGLLYAA 267 (417)
T ss_pred ------------HHH-----HHHHcChHH-HH--HHHHHHH-HHHHHhHHHhhHHH---HHhccC---CChhHhHHHHHH
Confidence 000 000000111 11 1111111 11111111111111 111111 12 2334444
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHH
Q 014067 241 PVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWV 320 (431)
Q Consensus 241 n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wl 320 (431)
..+..++..++.+++ .+| .+..+-+..+.++.+++++..+.. .+++..
T Consensus 268 ~~~g~~ig~~~~~~l----~~~-------~~~~~~l~~~~~~~~~~~~~~~~~---------------------~~~~~~ 315 (417)
T PRK10489 268 VPLGAALGALTSGWL----AHS-------ARPGLLMLLSTLGSFLAVGLFGLM---------------------PMWILA 315 (417)
T ss_pred HHHHHHHHHHHHHHh----hhc-------cCcchHHHHHHHHHHHHHHHHHcc---------------------chHHHH
Confidence 444555555554443 222 122233556666666655443332 233445
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhh
Q 014067 321 ALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLE 400 (431)
Q Consensus 321 i~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~ 400 (431)
+...++.+++.....+....++.+..|++.||..+|++.....+|..+|+.+.+.+.+..+ ..
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-----------------~~ 378 (417)
T PRK10489 316 VLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-----------------PV 378 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-----------------hh
Confidence 5667788888888778888999999999999999999999999999999999887753221 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccc
Q 014067 401 RFYWLMCILGGLNFLHFLFWAARYKYSS 428 (431)
Q Consensus 401 ~~f~~la~l~~v~~i~~~~~~~~~~~~~ 428 (431)
..++..+++.++..++.....+++|.++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (417)
T PRK10489 379 ASASASGFGLLIIGVLLLLVLGELRRFR 406 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 2355556655555555555556655443
No 15
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.37 E-value=5.4e-11 Score=116.79 Aligned_cols=265 Identities=9% Similarity=0.033 Sum_probs=157.3
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.+++.+...|...+++.|.++++ +|.+.++++..+.++|.+++|.+++++.++.||+..|.+.++..
T Consensus 95 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~ 168 (365)
T TIGR00900 95 VYVLAGILAIAQAFFTPAYQAMLPDLVPEE------QLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGF 168 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 456777889999999999999999999754 46788999999999999999999999999899999999988877
Q ss_pred HHHHHHHHhcCcceeecCCCCCchh-HHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCc
Q 014067 82 LLSIPIFLLGSPFYRNKIPTGSPLT-TIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPT 160 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p~~~~~~-~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~ 160 (431)
+++.+.....+..-.+ +++.++.. +..+ +.
T Consensus 169 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------------------------------~~-------------- 199 (365)
T TIGR00900 169 AISALLIVSVRIPELA-ASEIQALSNAVLR----------------------------------DT-------------- 199 (365)
T ss_pred HHHHHHHHhcccccCC-CccccccchhHHH----------------------------------HH--------------
Confidence 7665544332211000 00000000 0000 00
Q ss_pred hhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhccc-chHHHHHHHhccCCCCcccCCCCcCc
Q 014067 161 EDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLS-TFSVQQAATMNTKLGSLKVPPASLPV 239 (431)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~-t~~~~~~~~~~~~~gg~~ip~~~l~~ 239 (431)
.+..++.++-..+..+.+...+++..+.... +..+....+. .+.. ....+.+..
T Consensus 200 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~ 254 (365)
T TIGR00900 200 ----------------------REGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKY-LGRG--STHYGWVLA 254 (365)
T ss_pred ----------------------HhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCCc--hHHHHHHHH
Confidence 0000000000011112222222222222211 1111111110 1111 011233344
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHH
Q 014067 240 FPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLW 319 (431)
Q Consensus 240 ~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~w 319 (431)
...+..++..++..++ .+|. ...+-+..+.++.++++....... + +.++
T Consensus 255 ~~~~~~~~~~~~~~~l----~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~ 303 (365)
T TIGR00900 255 AFGLGALLGALLLGLL----GRYF-------KRMALMTGAIFVIGLAILVVGLTP-------------------P-NFPL 303 (365)
T ss_pred HHHHHHHHHHHHHHHH----HHHh-------chhHHHHHHHHHHHHHHHHHHhhc-------------------h-hHHH
Confidence 4444555555555433 2332 112234445555555555444331 1 3556
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 320 VALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 320 li~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
++...++.+++.....+...+++.+..|++.||..+|++.....+|..+++.+.+.+.
T Consensus 304 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~ 361 (365)
T TIGR00900 304 FLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLA 361 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778899999999999999999999999999999999999999999999998887764
No 16
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.36 E-value=3.3e-10 Score=113.59 Aligned_cols=275 Identities=11% Similarity=0.050 Sum_probs=160.0
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATIL 82 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~ 82 (431)
++...+.++|.+...++..+...|+++++ +|.++.+++..+.++|..+|+.+++++.++.||+..|.++++..+
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 116 LLGRLLLGIGESLAGTGSILWGIGRVGAL------HTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred HHHHHHHHhhHHhhcchHHHHHHhhcChh------hhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 45567888999999999999999998654 356688888899999999999999999888999998887666544
Q ss_pred HHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCchh
Q 014067 83 LSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTED 162 (431)
Q Consensus 83 i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~~ 162 (431)
+..+ +.++ .|+.++.. .+.
T Consensus 190 ~~~~---~~~~-----~~~~~~~~--------------------------------~~~--------------------- 208 (399)
T PRK05122 190 LGLL---LARP-----RPAVPPVK--------------------------------GER--------------------- 208 (399)
T ss_pred HHHH---HHhc-----CCCCCCCC--------------------------------ccc---------------------
Confidence 3322 2111 11110000 000
Q ss_pred HHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCCCCcCchhH
Q 014067 163 IKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPPASLPVFPV 242 (431)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~~~l~~~n~ 242 (431)
..+ .+..|+.......+ .++...+....+....... +.+ .. ..+.......
T Consensus 209 -------------~~~-------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~---~~-~~~~~~~~~~ 259 (399)
T PRK05122 209 -------------LPF-------RRVLGRVWPYGMGL---ALASIGFGTIATFITLYYA--ARG---WD-GAALALTLFG 259 (399)
T ss_pred -------------hhH-------HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH--Hcc---cc-cchHHHHHHH
Confidence 000 01112211111111 1111112221111111111 111 10 1222233344
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHH
Q 014067 243 IFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVAL 322 (431)
Q Consensus 243 ~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~ 322 (431)
+..++..++.+++. +|. ...+.+..+.++.++++...+.. .+.++++.
T Consensus 260 ~~~~~~~~~~g~l~----~r~-------~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~ 307 (399)
T PRK05122 260 VAFVGARLLFGNLI----NRL-------GGLRVAIVSLLVEILGLLLLWLA---------------------PSPWMALI 307 (399)
T ss_pred HHHHHHHHHHHHHH----HHh-------ccHHHHHHHHHHHHHHHHHHHHh---------------------ccHHHHHH
Confidence 44444445554433 332 22234556666666666554442 23445666
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHH
Q 014067 323 QYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERF 402 (431)
Q Consensus 323 ~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~ 402 (431)
..++.|++.....|.....+.+..|++.||..+|++.....+|..+++.+.+.+.+.. .....
T Consensus 308 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-----------------g~~~~ 370 (399)
T PRK05122 308 GAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF-----------------GYPSI 370 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------------CHHHH
Confidence 7889999998888887788888999999999999999999999988887777664211 12345
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 014067 403 YWLMCILGGLNFLHFLFWAA 422 (431)
Q Consensus 403 f~~la~l~~v~~i~~~~~~~ 422 (431)
|++.+++.+++.++..+..+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 371 FLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 66667666666655554444
No 17
>PRK10054 putative transporter; Provisional
Probab=99.35 E-value=2.6e-11 Score=121.75 Aligned_cols=77 Identities=9% Similarity=0.084 Sum_probs=61.5
Q ss_pred HHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHHH
Q 014067 5 GLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILLS 84 (431)
Q Consensus 5 ~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i~ 84 (431)
...+.+.+.+.+.|...+...|.++++ +|.+++++.|...|+|.+++|.+++++.+ .||+..|.+.++..+++
T Consensus 102 ~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~ 174 (395)
T PRK10054 102 FFALINCAYSVFSTVLKAWFADNLSST------SKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFP 174 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHH
Confidence 344555666677788888888887643 46779999999999999999999999875 79999999988888777
Q ss_pred HHHH
Q 014067 85 IPIF 88 (431)
Q Consensus 85 ~iif 88 (431)
++..
T Consensus 175 ~i~~ 178 (395)
T PRK10054 175 LVFI 178 (395)
T ss_pred HHHH
Confidence 5433
No 18
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.33 E-value=5.7e-10 Score=112.22 Aligned_cols=81 Identities=12% Similarity=0.016 Sum_probs=65.3
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+++...+.+++.+...+...+...|.++++ ++.+..++.+.+.++|..++|.+++++.++.+|+..|.+.++..
T Consensus 104 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~ 177 (406)
T PRK15402 104 FTLLRFLQGIGLCFIGAVGYAAIQESFEEA------DAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALA 177 (406)
T ss_pred HHHHHHHHHhHhhhHHHHHHHHHHHHhChh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHH
Confidence 355667778888888888888899888654 24567778888888999999999999999899999999988887
Q ss_pred HHHHHHH
Q 014067 82 LLSIPIF 88 (431)
Q Consensus 82 ~i~~iif 88 (431)
+++.+..
T Consensus 178 ~~~~~~~ 184 (406)
T PRK15402 178 ALSFFGL 184 (406)
T ss_pred HHHHHHH
Confidence 7766544
No 19
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.32 E-value=4.2e-10 Score=112.39 Aligned_cols=272 Identities=13% Similarity=0.041 Sum_probs=161.9
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATIL 82 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~ 82 (431)
++..++.+.+.+...|...++..+ +. +++...++....+.++|..++|.+++++.+++||+..|.+.++...
T Consensus 98 ~~~~~l~~~~~~~~~p~~~al~~~-~~-------~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~ 169 (382)
T TIGR00902 98 FIAIGLFALFFSAGMPIGDALANT-WQ-------KQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA 169 (382)
T ss_pred HHHHHHHHHHHccchhHHHHHHHH-HH-------HHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 445556677777777877776543 21 1345679999999999999999999999999999999988766543
Q ss_pred HHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCchh
Q 014067 83 LSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTED 162 (431)
Q Consensus 83 i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~~ 162 (431)
+..+.+ ..++. .+|+++.. ..+.
T Consensus 170 ~~~~~~-~~~~~---~~~~~~~~--------------------------------~~~~--------------------- 192 (382)
T TIGR00902 170 FMLIGF-LIKPT---IPPKDAIP--------------------------------EDES--------------------- 192 (382)
T ss_pred HHHHHH-HcCCC---CCCCcccc--------------------------------cccc---------------------
Confidence 333322 21111 01111000 0000
Q ss_pred HHHHhhhccCCCCCCccccccchh-hHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCC---CCcC
Q 014067 163 IKFLNRALRNNPAYPIVQCTVKEV-EEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPP---ASLP 238 (431)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~v-~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~---~~l~ 238 (431)
...+ +..+. ++ |+ +..+.+...+++..+.+..+.....-+ | .| .++ +.+.
T Consensus 193 -------------~~~~--~~~~~l~~-~~---~~~~l~~~~l~~~~~~~~~~~~~~~l~--~--~g---~s~~~~g~l~ 246 (382)
T TIGR00902 193 -------------QGDS--AFIALLKN-PM---NLRFLAAVCLIQGAHAAYYGFSAIYWQ--A--AG---ISASATGLLW 246 (382)
T ss_pred -------------ccch--hHHHHHcC-hH---HHHHHHHHHHHHHHHHHHHHHHHHHHH--H--CC---CCHhHHHHHH
Confidence 0000 00000 11 22 222233334444445554443322111 2 23 232 2334
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHH
Q 014067 239 VFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFL 318 (431)
Q Consensus 239 ~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~ 318 (431)
.++.+..++..++.++ +.+| .++.+-+.+|.++.++.+...++. .+++
T Consensus 247 ~~~~~~~i~~~~~~~~----l~~r-------~g~~~~l~~~~~~~~~~~~~~~~~---------------------~~~~ 294 (382)
T TIGR00902 247 GIGVLAEIIIFAFSNK----LFQN-------CSARDLLLISAIACVGRWAIIGAI---------------------EAFP 294 (382)
T ss_pred HHHHHHHHHHHHHhHH----HHhh-------CCHHHHHHHHHHHHHHHHHHHHhH---------------------hhHH
Confidence 4444444444444443 4454 344455778888888887766554 2455
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHH-HHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcc
Q 014067 319 WVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSW-ASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHY 397 (431)
Q Consensus 319 wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~-l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~ 397 (431)
+++...+++++.+.+..+....++.+. |++.++..+|+++ ...++|..+++.+++.+.+.. +
T Consensus 295 ~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~----------------g 357 (382)
T TIGR00902 295 LIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL----------------G 357 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------c
Confidence 666667999999999999999999998 9999999999986 567889999998888875221 1
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 014067 398 HLERFYWLMCILGGLNFLH 416 (431)
Q Consensus 398 ~l~~~f~~la~l~~v~~i~ 416 (431)
...|+.+++++++++++
T Consensus 358 --~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 358 --AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 13477778877766443
No 20
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.32 E-value=3.4e-10 Score=116.01 Aligned_cols=81 Identities=14% Similarity=0.142 Sum_probs=69.1
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccccc-CchhHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNK-GWQWGFGISTAT 80 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~-g~~~~F~i~~i~ 80 (431)
+++..++.+++.|...|...+...+.++++ +|..+.++++.+.++|.++++.+++++.+++ ||+..|.+.++.
T Consensus 134 l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~ 207 (465)
T TIGR00894 134 VVFCRVIQGLAQGSVSPATHKIIVKWAPPK------ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIV 207 (465)
T ss_pred HHHHHHHHHHhcccchhhHHHHHHhcCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHH
Confidence 456677899999999999999999999754 3677899999999999999999999999884 999999998887
Q ss_pred HHHHHHHH
Q 014067 81 ILLSIPIF 88 (431)
Q Consensus 81 ~~i~~iif 88 (431)
.++..++.
T Consensus 208 ~~~~~~~~ 215 (465)
T TIGR00894 208 GCAWSLLW 215 (465)
T ss_pred HHHHHHHH
Confidence 76665544
No 21
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.31 E-value=3.1e-10 Score=110.41 Aligned_cols=259 Identities=18% Similarity=0.233 Sum_probs=176.0
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.+++.+...+...++..|.++++ +|...+++.+.+.++|..+++.+++++.++.+|+..|.+.++..
T Consensus 90 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (352)
T cd06174 90 LLVGRFLLGLGGGALYPAAAALIAEWFPPK------ERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILG 163 (352)
T ss_pred HHHHHHHHHcccccccHhHHHHHHHhCCcc------chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 456778889999999999999999999764 36778999999999999999999999999899999999998888
Q ss_pred HHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCch
Q 014067 82 LLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTE 161 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~ 161 (431)
+++.++..+.. +...
T Consensus 164 ~~~~~~~~~~~-------------~~~~---------------------------------------------------- 178 (352)
T cd06174 164 LLLALLLLFLL-------------RLLL---------------------------------------------------- 178 (352)
T ss_pred HHHHHHHHHHH-------------HHHH----------------------------------------------------
Confidence 87766543321 0000
Q ss_pred hHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCCCCcCchh
Q 014067 162 DIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPPASLPVFP 241 (431)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~~~l~~~n 241 (431)
.+.+....++..+............+. .+.. ....+++....
T Consensus 179 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~ 220 (352)
T cd06174 179 -----------------------------------LLALAFFLLSFGYYGLLTYLPLYLQEV-LGLS--AAEAGLLLSLF 220 (352)
T ss_pred -----------------------------------HHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCC--HHHHHHHHHHH
Confidence 000001111111111111111110110 0100 11234556666
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCCCchh-hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHH
Q 014067 242 VIFILILAPVYNHVIIPFARKVTKTEMGITHLQ-RIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWV 320 (431)
Q Consensus 242 ~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~-ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wl 320 (431)
.+..++..++..++.++..+| + .+.++.++..++++.....+ +.++.
T Consensus 221 ~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~---------------------~~~~~ 268 (352)
T cd06174 221 GLGGILGALLGGLLSDRLGRR-----------RLLLLIGLLLAALGLLLLALAP---------------------SLALL 268 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHHHHHHHHhc---------------------cHHHH
Confidence 777777777777655444322 2 46677777777776665532 25677
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhh
Q 014067 321 ALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLE 400 (431)
Q Consensus 321 i~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~ 400 (431)
....++.++++....+...+.+.+..|++.|+..+|++.....+|..+++.+.+.+.+.. +| .
T Consensus 269 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~------~~-----------~ 331 (352)
T cd06174 269 LVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG------GY-----------G 331 (352)
T ss_pred HHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------Cc-----------c
Confidence 788999999999999999999999999999999999999999999999999988775211 12 2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014067 401 RFYWLMCILGGLNFLHFL 418 (431)
Q Consensus 401 ~~f~~la~l~~v~~i~~~ 418 (431)
..|.+.+++.+++.+++.
T Consensus 332 ~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 332 GVFLILAALALLAALLLL 349 (352)
T ss_pred hHHHHHHHHHHHHHHHhe
Confidence 346666767666665543
No 22
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.30 E-value=3.6e-10 Score=112.84 Aligned_cols=255 Identities=13% Similarity=0.038 Sum_probs=146.6
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATIL 82 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~ 82 (431)
++...+.+++.+...|...++..|..+ ++.+.++......++|..+||.+++++.+++||+..|.+.++..+
T Consensus 98 ~i~~~l~g~~~~~~~~~~~a~~~~~~~--------~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~ 169 (382)
T PRK11128 98 FVAIGLFNLFFSPLVPLTDALANTWQK--------QIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVA 169 (382)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHh--------hccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 345566788888899988888777521 234567777888899999999999999999999999988887655
Q ss_pred HHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCchh
Q 014067 83 LSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTED 162 (431)
Q Consensus 83 i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~~ 162 (431)
+..+.. +..+ +.+|++++.+ +.+ + ..
T Consensus 170 ~~~~~~-~~~~---~~~~~~~~~~-------------------------------~~~----~------~~--------- 195 (382)
T PRK11128 170 SMLLGQ-LLRP---TIMPQGESRQ-------------------------------QES----A------GW--------- 195 (382)
T ss_pred HHHHHH-HccC---CCCCcccccc-------------------------------ccc----c------cc---------
Confidence 544332 2211 1111110000 000 0 00
Q ss_pred HHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCCCCcCchhH
Q 014067 163 IKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPPASLPVFPV 242 (431)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~~~l~~~n~ 242 (431)
..+ .+.-..|++ ..+.+...+.+..+.+..+......+ |. |.-.-..+.+..++.
T Consensus 196 -------------~~~-----~~i~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~--~~--g~s~~~~g~~~~~~~ 250 (382)
T PRK11128 196 -------------PAW-----KALLKEPTV---WRFLLCVSLLQGSHAAYYGFSAIYWQ--AA--GYSASTIGYLWSLGV 250 (382)
T ss_pred -------------chH-----HHHHcChhH---HHHHHHHHHHHHHhHhHHHHHHHHHH--HC--CCCHhHHHHHHHHHH
Confidence 000 000001122 22222223333333333322222111 11 200011234455565
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHH
Q 014067 243 IFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVAL 322 (431)
Q Consensus 243 ~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~ 322 (431)
+..++..++.+++. +|. +..+.+.+++++.+++++..+.. .+++++++
T Consensus 251 ~~~~~~~~~~g~l~----~r~-------~~~~~l~~~~~~~~~~~~~~~~~---------------------~~~~~~~~ 298 (382)
T PRK11128 251 VAEVLIFAFSNRLF----RRW-------SARDLLLLSAICGVVRWGLMGST---------------------TALPWLIV 298 (382)
T ss_pred HHHHHHHHHHHHHH----HHC-------CHHHHHHHHHHHHHHHHHHHHhh---------------------hhHHHHHH
Confidence 55555555555543 442 33344667777777766554443 24566677
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHH-HHHHHHHHHhhhhhhhhc
Q 014067 323 QYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSW-ASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 323 ~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~-l~~~iG~~l~~~l~~~~~ 377 (431)
..++.++++.+..+....++.++. ++.++.++++.. +..++|..+|+.+++.+.
T Consensus 299 ~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~ 353 (382)
T PRK11128 299 IQILHCGTFTVCHLAAMRYIAARP-GSEVIRLQALYSALAMGGSIAIMTVLSGFLY 353 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999988874 555688899886 556778788888887775
No 23
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.30 E-value=5.2e-10 Score=113.74 Aligned_cols=83 Identities=22% Similarity=0.348 Sum_probs=68.6
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhh---hhcccccCchhHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFV---VWIEDNKGWQWGFGIST 78 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~---~~l~~~~g~~~~F~i~~ 78 (431)
++++..+.++|.|...+...++++|.++++ +|..+.++++.+.++|.++++.++ +.+.+..||++.|.+.+
T Consensus 130 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~ 203 (481)
T TIGR00879 130 LIVGRVLLGIGVGIASALVPMYLSEIAPKA------LRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQL 203 (481)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHccCChh------hhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHH
Confidence 466788899999999999999999999754 366788999999999999999999 77777889999999977
Q ss_pred HHHHHHHHHHHh
Q 014067 79 ATILLSIPIFLL 90 (431)
Q Consensus 79 i~~~i~~iif~~ 90 (431)
+..++..+..++
T Consensus 204 ~~~~~~~~~~~~ 215 (481)
T TIGR00879 204 IPAGLLFLGLFF 215 (481)
T ss_pred HHHHHHHHHHhc
Confidence 766665544433
No 24
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.29 E-value=4.6e-11 Score=116.78 Aligned_cols=264 Identities=14% Similarity=0.193 Sum_probs=156.3
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.++|.+...|...+++.|.++++ +|...+++...+.++|.++++.+++++.+++||+..|.+.++..
T Consensus 88 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~ 161 (352)
T PF07690_consen 88 LLIARFLLGIGSGFFSPASNALIADWFPPE------ERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILS 161 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTC------CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHH
T ss_pred Hhhhccccccccccccccccccccccchhh------hhhhccccccchhhhhhhcccchhhhhhhccccccccccccchh
Confidence 567788999999999999999999999875 36778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCch
Q 014067 82 LLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTE 161 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~ 161 (431)
++..++.....+ +++++..... +.+ +...
T Consensus 162 ~~~~il~~~~~~---~~~~~~~~~~-------------------------------~~~----~~~~------------- 190 (352)
T PF07690_consen 162 LIAAILFILFLP---EPPPPRERES-------------------------------PKE----SESK------------- 190 (352)
T ss_dssp HHHHHHHHCCC------STTTT--S-------------------------------STT----TT---------------
T ss_pred hhhhhhHhhhhh---hccccccccc-------------------------------ccc----cccc-------------
Confidence 988775433221 1111110000 000 0000
Q ss_pred hHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHH-HHHhccCCCCcccCCCCcCch
Q 014067 162 DIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQ-AATMNTKLGSLKVPPASLPVF 240 (431)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~-~~~~~~~~gg~~ip~~~l~~~ 240 (431)
.+.++.. ..+...+.+.+. .+++....+...+....+..... .+..+.+ +. ...+.+..+
T Consensus 191 ------------~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~-~~~~~~~~~ 251 (352)
T PF07690_consen 191 ------------KPKPLKP-GFKSLFKNPVLW---ILLIAFFLFFFVFSGFSFFLPLYLQEVLGFS--GP-SQAGLLFSI 251 (352)
T ss_dssp ------------HHHCCCH--CTHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC--TH-HHHHHHHHH
T ss_pred ------------ccccccc-ccccccccchhh---hhhhhhhHHHHHHHHhhcccchhhhhccCCC--HH-HHHHHHHHH
Confidence 0000000 000111111111 12222222222332222222211 1111111 00 112233444
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHH
Q 014067 241 PVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWV 320 (431)
Q Consensus 241 n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wl 320 (431)
..+..++..++.+++. +|. +..++..+......++.+...+... ..+..|.
T Consensus 252 ~~~~~~~~~~~~~~l~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~ 302 (352)
T PF07690_consen 252 FGIVGIIGSLLAGRLS----DRF-------GRRRRLLIAILLLILGALGLLLLPF------------------SSSPVWL 302 (352)
T ss_dssp HHHHHHHHHHHHHHHH----HHT-------TCHHHHHHHHHHHHHHHHHHCCSHH------------------HCHHHHH
T ss_pred HHHHHHHHHHHHHHHH----HHc-------CcHHHHHHHHHHHHHHHHHHHHHHH------------------hhhHHHH
Confidence 4555555555665554 331 2223344444444443333333210 1245677
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhh
Q 014067 321 ALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFST 370 (431)
Q Consensus 321 i~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~ 370 (431)
+...++.|++..+..+.....+.+.+|++.+|.++|+.....++|..+||
T Consensus 303 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 303 IIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 77888999999999999999999999999999999999999999999875
No 25
>PRK12382 putative transporter; Provisional
Probab=99.26 E-value=1.2e-09 Score=109.21 Aligned_cols=274 Identities=9% Similarity=0.026 Sum_probs=158.5
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.++|.+...|...+.+.|.++++ +|.++++++..+.++|.+++|.+++++.+.+||+..+.+..+..
T Consensus 115 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 188 (392)
T PRK12382 115 LVVGRLILGFGESQLLTGALTWGLGLVGPK------HSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLP 188 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcc------ccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 345667788888888888888888888644 36778899999999999999999999988899998776554433
Q ss_pred HHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCch
Q 014067 82 LLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTE 161 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~ 161 (431)
++... +.+ +.++.+++++. + .
T Consensus 189 ~~~~~---~~~-~~~~~~~~~~~---------------------------------~-~--------------------- 209 (392)
T PRK12382 189 LLAWA---FNG-TVRKVPAHAGE---------------------------------R-P--------------------- 209 (392)
T ss_pred HHHHH---HHH-hccCCCCCccc---------------------------------C-c---------------------
Confidence 32222 211 11110110000 0 0
Q ss_pred hHHHHhhhccCCCCCCccccccchhhHHHHHHhH-HHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCCCCcCch
Q 014067 162 DIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKI-FPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPPASLPVF 240 (431)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~-l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~~~l~~~ 240 (431)
..+ +..|.+.+. +.+.+....+.......+ .+ .+ +.+ +. +.+.....
T Consensus 210 --------------~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~-~~----~~~---~~-~~~~~~~~ 257 (392)
T PRK12382 210 --------------SLW--------SVVGLIWKPGLGLALQGVGFAVIGTFVS-LY-FA----SKG---WA-MAGFTLTA 257 (392)
T ss_pred --------------hHH--------HHHHHHHHhHHHHHHHHHHHhHHHHHHH-HH-HH----hcC---Cc-hhHHHHHH
Confidence 000 001111110 001111111111111111 11 11 111 10 11222333
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHH
Q 014067 241 PVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWV 320 (431)
Q Consensus 241 n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wl 320 (431)
..+..++..++.+++. +|. .+.+.+.++..+.+++++..... .+.++.
T Consensus 258 ~~~~~~~~~~~~g~l~----~r~-------g~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~ 305 (392)
T PRK12382 258 FGGAFVLMRVLFGWMP----DRF-------GGVKVAIVSLLVETVGLLLLWLA---------------------PTAWVA 305 (392)
T ss_pred HHHHHHHHHHHHHHHH----Hhc-------CCCeehHHHHHHHHHHHHHHHHc---------------------ccHHHH
Confidence 4444455556655544 332 22233556777777766554432 134455
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhh
Q 014067 321 ALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLE 400 (431)
Q Consensus 321 i~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~ 400 (431)
++..++.++++....|.....+.+.+|++.||..+|+++....+|+.+++.+.+.+.+.. +| .
T Consensus 306 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~------g~-----------~ 368 (392)
T PRK12382 306 LAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF------GY-----------P 368 (392)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------Cc-----------h
Confidence 667788999998888888888889999999999999999999999999998888775321 12 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 014067 401 RFYWLMCILGGLNFLHFLFWA 421 (431)
Q Consensus 401 ~~f~~la~l~~v~~i~~~~~~ 421 (431)
..|.+.+++.+++.++.+...
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 369 SVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 456777777777666555443
No 26
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.22 E-value=6.4e-10 Score=126.38 Aligned_cols=279 Identities=10% Similarity=-0.028 Sum_probs=160.2
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+++++++.+++.+.+.|...+++.|.++++ ++..+.+++.++.++|.++||.+++++.+..||+..|.+.++..
T Consensus 111 l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~------~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~ 184 (1140)
T PRK06814 111 LFAALFLMGIHSALFGPIKYSILPDHLNKD------ELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIA 184 (1140)
T ss_pred HHHHHHHHHHHHHhhchHHHHhhHhhcCcc------ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 577888999999999999999999999865 36779999999999999999999999999999999985444444
Q ss_pred HHHHHHHHhcCcceeecCCCCCchh---HHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCC
Q 014067 82 LLSIPIFLLGSPFYRNKIPTGSPLT---TIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQK 158 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p~~~~~~---~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~ 158 (431)
++++++.+...+ .+++....+ ...+-...
T Consensus 185 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-------------------------------------------- 216 (1140)
T PRK06814 185 VLGWLASLFIPK----TGNAAPDLKIDRNIIRSTIT-------------------------------------------- 216 (1140)
T ss_pred HHHHHHHhhCCC----CCCCCCCCeeccchHHHHHH--------------------------------------------
Confidence 444333222111 111100000 00000000
Q ss_pred CchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCCCCcC
Q 014067 159 PTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPPASLP 238 (431)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~~~l~ 238 (431)
.....++-..+..+.+....++.++....+.++....+ .+|.-..-.+++.
T Consensus 217 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~g~~~~~~g~~~ 267 (1140)
T PRK06814 217 --------------------------LLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKE---TLGGDENVATLFL 267 (1140)
T ss_pred --------------------------HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHH---HcCCchHHHHHHH
Confidence 00000000011112222223333332222222222111 1120001134556
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCC--CCCcchh
Q 014067 239 VFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNS--SEPLPIT 316 (431)
Q Consensus 239 ~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~s 316 (431)
+...+..++...+..++. ++. ...+.+..|.++.+++.+.+++... +........-. .-....+
T Consensus 268 ~~~~~g~~ig~~~~g~l~----~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~ 333 (1140)
T PRK06814 268 AVFSVGVAVGSFLASKLS----EGR-------ITLLYVPIGALLMGLFGLDLAFASS---SVPAEPAQLKSILVFLSKRH 333 (1140)
T ss_pred HHHHHHHHHHHHHHHHHh----CCc-------eeeeeehHHHHHHHHHHHHHHhccc---ccccccccccchhhhhcccc
Confidence 667777777777766643 221 1122344555555444443333100 00000000000 0000135
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 317 FLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 317 ~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.|++++..++.|++..+..+...+++.+.+|++++|.++|++++...+|..+++.+++.+.
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 334 GWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred cHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677788899999999999999999999999999999999999999999999998887774
No 27
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.19 E-value=9.1e-09 Score=102.09 Aligned_cols=83 Identities=13% Similarity=0.132 Sum_probs=70.2
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.++|.+...+...+++.|.++++ +|.+.+++++...++|..+++.+++++.++.||+..|.+.++..
T Consensus 96 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 169 (385)
T TIGR00710 96 LLVLRFVQAFGASAGSVISQALVRDIYPGE------ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAG 169 (385)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 456677889999999999999999998743 36778999999999999999999999999899999999888877
Q ss_pred HHHHHHHHh
Q 014067 82 LLSIPIFLL 90 (431)
Q Consensus 82 ~i~~iif~~ 90 (431)
++..+...+
T Consensus 170 ~~~~~~~~~ 178 (385)
T TIGR00710 170 ILLSALIFF 178 (385)
T ss_pred HHHHHHHHH
Confidence 776655544
No 28
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.19 E-value=3.8e-09 Score=104.53 Aligned_cols=83 Identities=14% Similarity=0.107 Sum_probs=58.7
Q ss_pred HHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHH
Q 014067 4 AGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILL 83 (431)
Q Consensus 4 ~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i 83 (431)
+...+.+.+.+...|...++..+..++++ +.+....++.+.+.++|..+++.+++++.+++||++.|.+.++..++
T Consensus 92 ~~~~~~g~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~ 167 (375)
T TIGR00899 92 VLGVLLSSFASTANPQLFALAREHADRTG----REAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVL 167 (375)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHhhhcc----hhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHH
Confidence 33445555566667777777776654321 11112357778889999999999999999989999999999888777
Q ss_pred HHHHHHh
Q 014067 84 SIPIFLL 90 (431)
Q Consensus 84 ~~iif~~ 90 (431)
..++.++
T Consensus 168 ~~~~~~~ 174 (375)
T TIGR00899 168 CGVLVWL 174 (375)
T ss_pred HHHHHHH
Confidence 6654443
No 29
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.19 E-value=5.2e-10 Score=114.50 Aligned_cols=276 Identities=11% Similarity=0.012 Sum_probs=150.1
Q ss_pred HHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHHHHH
Q 014067 7 YIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILLSIP 86 (431)
Q Consensus 7 ~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i~~i 86 (431)
.+.++|.|...+...+.+.+.++ + +|..+.++.+.+.++|..++|.+.+++.+.+||++.|.+.++..++..+
T Consensus 116 ~l~G~~~~~~~~~~~~~~~~~~~-~------~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v 188 (455)
T TIGR00892 116 FITGLGLAFNFQPSLTMLGKYFY-R------RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCV 188 (455)
T ss_pred HHHHhcchhhhhHHHHHHHHHHH-h------hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 45678888765555677778773 1 3577899999999999999999999999999999999999988877665
Q ss_pred HHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCchhHHHH
Q 014067 87 IFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTEDIKFL 166 (431)
Q Consensus 87 if~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 166 (431)
...+.++.-.. ++..+... +.... .+... ++... ...
T Consensus 189 ~~~~~~~~~~~--~~~~~~~~----------~~~~~--------------~~~~~---~~~~~--~~~------------ 225 (455)
T TIGR00892 189 CGALMRPVGPS--QRVSKSKS----------KEGLP--------------PDGST---KKLSK--KST------------ 225 (455)
T ss_pred HHHHhCCCCcc--cccccccc----------cccCC--------------CCCcc---ccccc--cch------------
Confidence 44443321110 00000000 00000 00000 00000 000
Q ss_pred hhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCCCCcCchhHHHHH
Q 014067 167 NRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPPASLPVFPVIFIL 246 (431)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~~~l~~~n~~~ii 246 (431)
.+ +...+. ..+-.++ +. +....+...+....+....+.+..... |.+.. .-..+.+.++..+..+
T Consensus 226 ----~~-~~~~~~--~~~~~~~-~~---~~~~~~~~~l~~~~~~~~~~~l~~~~~--~~g~s--~~~~g~~~~~~~~~~~ 290 (455)
T TIGR00892 226 ----AE-KINRFL--DFSLFTH-RG---FLVYLSGNVIMFLGFFAPIIFLVPYAK--DKGVD--EYEAAFLLSIIGFVDI 290 (455)
T ss_pred ----hh-hhhhhc--chHHhcC-ch---HHHHHHHHHHHHHHccchHHHHHHHHH--HcCCC--HHHHHHHHHHHHHHHH
Confidence 00 000000 0000000 11 111212222222222222222221111 22211 1112345556666666
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchhh--hHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHH
Q 014067 247 ILAPVYNHVIIPFARKVTKTEMGITHLQR--IGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQY 324 (431)
Q Consensus 247 l~~pl~~~~~~pl~~~~~~~~~~~s~~~k--i~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~ 324 (431)
+..|+..++.+ |.. ..+.++ +.+++++.+++++..... .+.++++...
T Consensus 291 ~~~~~~g~l~d----~~~-----~~~~~~~~~~~~~~~~~l~~ll~~~~---------------------~~~~~~~i~~ 340 (455)
T TIGR00892 291 FARPSCGLIAG----LKW-----IRPHVQYLFSFALLFNGLTHLLCALA---------------------GDYTGLVIYC 340 (455)
T ss_pred HHHHHHHHHhc----ccc-----cCHHHHHHHHHHHHHHHHHHHHHHHh---------------------chHHHHHHHH
Confidence 77777666542 211 112222 333344444433332221 2455667778
Q ss_pred HHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 325 LFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 325 ~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
++.+++.....+...+.+.+..|++.+|..+|++.....+|+.+|+.+.+.+.
T Consensus 341 ~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~ 393 (455)
T TIGR00892 341 IFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLV 393 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeee
Confidence 89999998888999999999999999999999999999999999999988765
No 30
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.17 E-value=4.7e-09 Score=108.63 Aligned_cols=261 Identities=14% Similarity=0.126 Sum_probs=160.2
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+++..++++++.+.+.|.-++.+.+..++++ ...+.++.-...|+.-++||.++|.+....|-...|.+.+++.
T Consensus 106 Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsf 179 (524)
T PF05977_consen 106 LLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSF 179 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555678999999999999999999998653 5678888999999999999999999988889999999999998
Q ss_pred HHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCch
Q 014067 82 LLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTE 161 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~ 161 (431)
++++..+...++.. +++..+-.+..+-++...|.
T Consensus 180 l~~i~~l~~~~~~~---~~~~~~~e~~~~~l~~G~ry------------------------------------------- 213 (524)
T PF05977_consen 180 LISILALLRWKPPP---PPSSLPRERFFSALREGLRY------------------------------------------- 213 (524)
T ss_pred HHHHHHHHHccccc---cccccchhhhhhhHHHHHHH-------------------------------------------
Confidence 88766555544322 11111111111111100000
Q ss_pred hHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHH-HHhccCCCCcccCCCCcCch
Q 014067 162 DIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQA-ATMNTKLGSLKVPPASLPVF 240 (431)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~-~~~~~~~gg~~ip~~~l~~~ 240 (431)
+..-+.+...+ +...++.....-....++..+ +.++. + ..-.+.+.+.
T Consensus 214 ------------------------v~~~~~l~~~l---~~~~~~~l~~~a~~aLlPl~a~~~l~~--~--a~~yGll~a~ 262 (524)
T PF05977_consen 214 ------------------------VRSSPPLRSVL---LRSFLFNLFASAVWALLPLFARDVLGG--G--ASGYGLLLAA 262 (524)
T ss_pred ------------------------HhcchHHHHHH---HHHHHHHHhhhHHHHhhhHHHHHHhCC--c--HHHHHHHHHH
Confidence 00001111111 111111111111111222322 22221 1 0011223333
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHH
Q 014067 241 PVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWV 320 (431)
Q Consensus 241 n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wl 320 (431)
-++-. +.+.++.+..+++ .+..+-+..+.++.+++++.+++. -+.|..
T Consensus 263 ~gvGa-----i~Gal~~~~l~~~------~~~~~lv~~~~~~~a~~~~~lal~---------------------~~~~~~ 310 (524)
T PF05977_consen 263 FGVGA-----ILGALLLPRLRRR------LSSRRLVLLASLLFALALLLLALS---------------------PSFWLA 310 (524)
T ss_pred HHHHH-----HHHHHHHHHhhcc------cCcchhhHHHHHHHHHHHHHHhcc---------------------hHHHHH
Confidence 33333 3333444444432 344444667777777776666554 245566
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 321 ALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 321 i~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
++..++.|++...........+-+.+|++++|++++++......+..+|..+.+.+.
T Consensus 311 ~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 311 LIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778889999999999999999999999999999999999888777778887777765
No 31
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.17 E-value=3.3e-09 Score=104.63 Aligned_cols=252 Identities=10% Similarity=0.056 Sum_probs=143.6
Q ss_pred HHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccC--------chhHHHHHHH
Q 014067 8 IVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKG--------WQWGFGISTA 79 (431)
Q Consensus 8 li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g--------~~~~F~i~~i 79 (431)
+.+++.+...+...+++.|.++++ +|..+.++...+.++|.++++.+++++..+.| |+..|.+.++
T Consensus 92 ~~~~~~~~~~~~~~a~~~~~~~~~------~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai 165 (356)
T TIGR00901 92 LIAFFSATQDIALDAWRLEILSDE------ELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTAL 165 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHh------hhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHH
Confidence 456777778899999999999643 36778899999999999999999999988888 9999999999
Q ss_pred HHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCC
Q 014067 80 TILLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKP 159 (431)
Q Consensus 80 ~~~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~ 159 (431)
..+++.++.++..|+-.+++++++ +..+-.+..
T Consensus 166 ~~l~~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~-------------------------------------------- 198 (356)
T TIGR00901 166 LILPGLLVTLFLAKEPQEDASVPK---PLTQAVLKP-------------------------------------------- 198 (356)
T ss_pred HHHHHHHHHHHhccCCCcccccch---hHHHHHHHH--------------------------------------------
Confidence 887766544433221100001000 000000000
Q ss_pred chhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCCCC---
Q 014067 160 TEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPPAS--- 236 (431)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~~~--- 236 (431)
+ .+.-..+...++..+.+...++...+.+..+.......+ . | .+++.
T Consensus 199 ------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~--g---~~~~~~g~ 248 (356)
T TIGR00901 199 ------------------I-----REFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD--M--G---FSKEEIAL 248 (356)
T ss_pred ------------------H-----HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--c--C---CCHHHHHH
Confidence 0 000000110112223333333444444443333322222 1 2 23332
Q ss_pred cCchhH-HHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcch
Q 014067 237 LPVFPV-IFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPI 315 (431)
Q Consensus 237 l~~~n~-~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (431)
+..... +..++..++..++. +| .+..+.+.+++++.+++.....+... ..+..+ ....
T Consensus 249 ~~~~~~~~~~~~g~~~~g~l~----~r-------~g~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~------~~~~ 307 (356)
T TIGR00901 249 VAKINGLLGAILGGLIGGIIM----QP-------LNILYALLLFGIVQALTNAGFVWLAS----NGHHDG------ITFP 307 (356)
T ss_pred HhHHHHHHHHHHHHHHHHHHH----hh-------hhHHHHHHHHHHHHHHHHHHHHHHHh----cCcccc------cccc
Confidence 233333 23344444444444 33 23334466777777666655444310 000000 0013
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHH
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLA 363 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~ 363 (431)
+.++++...++.++++.+..+....+..+.+|+++||..+|+.....+
T Consensus 308 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 308 HLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 455677778899999999999999999999999999999999877654
No 32
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.16 E-value=4.1e-09 Score=105.67 Aligned_cols=72 Identities=10% Similarity=0.097 Sum_probs=51.7
Q ss_pred cCcccCchhhhcccCCCCChhhhhhhhhHH-HHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHHHHHHHHh
Q 014067 14 GGIKGSLAPHGAEQYDETTQLGRKQRSAFF-NYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILLSIPIFLL 90 (431)
Q Consensus 14 g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f-~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i~~iif~~ 90 (431)
+...|...++..|+.++++ |....+ ++...+.++|.+++|.+++++.+++||+..|.+.++..++..+..+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 120 STANPQMFALAREHADKTG-----REAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HhhHHHHHHHHHHHhhhcc-----chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 3456666677766654321 122233 57888999999999999999999999999999988776666554433
No 33
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.15 E-value=1.8e-08 Score=100.06 Aligned_cols=82 Identities=11% Similarity=0.210 Sum_probs=68.5
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+++...+.+++.+...+...++..|.++++ +|.+.+++.+.+.++|..++|.+++++.+..||+..|.+.++..
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 155 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKE------EFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAA 155 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 355677788999999999999999998644 36778999999999999999999999999899999999888777
Q ss_pred HHHHHHHH
Q 014067 82 LLSIPIFL 89 (431)
Q Consensus 82 ~i~~iif~ 89 (431)
++..+...
T Consensus 156 ~~~~~~~~ 163 (377)
T PRK11102 156 ILAAALVF 163 (377)
T ss_pred HHHHHHHH
Confidence 76655443
No 34
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.15 E-value=2.5e-09 Score=110.70 Aligned_cols=84 Identities=18% Similarity=0.144 Sum_probs=69.1
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.++|.|+..|...+.+.+.+.+++ +|.++++++..+.++|..+||.+++++.+++||++.|.+.....
T Consensus 97 li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~-----~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~ 171 (495)
T PRK14995 97 LIATRALLAIGAAMIVPATLAGIRATFTEEK-----QRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIV 171 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHH
Confidence 4677788999999999988888888775331 46778999999999999999999999999999999999887766
Q ss_pred HHHHHHHHh
Q 014067 82 LLSIPIFLL 90 (431)
Q Consensus 82 ~i~~iif~~ 90 (431)
++.+++...
T Consensus 172 ~~~~~l~~~ 180 (495)
T PRK14995 172 LVVMGLTAR 180 (495)
T ss_pred HHHHHHHHH
Confidence 666554433
No 35
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.14 E-value=1.1e-08 Score=105.61 Aligned_cols=81 Identities=17% Similarity=0.201 Sum_probs=65.2
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccc-ccCchhHHHHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIED-NKGWQWGFGISTATI 81 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~-~~g~~~~F~i~~i~~ 81 (431)
++...+.+++.+...+...++..|.++++ +|.++.++.-.+.++|.++++.+++++.+ ..||+..|.+.++..
T Consensus 111 ~~~~~l~~~~~a~~~i~~~a~~~~~~~~~------~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ 184 (491)
T PRK11010 111 AALAVVIAFCSASQDIVFDAWKTDVLPAE------ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALL 184 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChh------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHH
Confidence 34455677888889999999999998744 35667888889999999999999999988 479999999988877
Q ss_pred HHHHHHHH
Q 014067 82 LLSIPIFL 89 (431)
Q Consensus 82 ~i~~iif~ 89 (431)
++..+..+
T Consensus 185 ll~~l~~~ 192 (491)
T PRK11010 185 IPCIIATL 192 (491)
T ss_pred HHHHHHHH
Confidence 77655433
No 36
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.13 E-value=1.2e-08 Score=103.87 Aligned_cols=78 Identities=17% Similarity=0.116 Sum_probs=64.5
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATIL 82 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~ 82 (431)
++...+.+++.|...|...+.+.++++++ +|..+.++++.+.++|..+++.+++++.+++||++.|.+.++..+
T Consensus 115 ~~~~~l~g~~~g~~~~~~~~~~~~~~~~~------~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~ 188 (434)
T PRK11663 115 ALLWVLNAFFQGWGWPVCAKLLTAWYSRT------ERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAI 188 (434)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 34455667888888899999999999643 367789999999999999999999999999999999998887665
Q ss_pred HHHH
Q 014067 83 LSIP 86 (431)
Q Consensus 83 i~~i 86 (431)
+..+
T Consensus 189 ~~~~ 192 (434)
T PRK11663 189 VVGL 192 (434)
T ss_pred HHHH
Confidence 5443
No 37
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.13 E-value=1.9e-08 Score=103.31 Aligned_cols=81 Identities=20% Similarity=0.266 Sum_probs=64.6
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcc--------cccCchhHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIE--------DNKGWQWGF 74 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~--------~~~g~~~~F 74 (431)
++++++.++|.|+.-|...++++|+++++ +|..+.+++-.+..+|.++++.++..+. +++||++.|
T Consensus 124 ~~~R~l~G~~~g~~~~~~~~~i~e~~~~~------~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f 197 (479)
T PRK10077 124 VIYRIIGGIGVGLASMLSPMYIAEIAPAH------IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMF 197 (479)
T ss_pred HHHHHHHhhhHhHHhhHHHHHHHhhCChh------hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHH
Confidence 56778889999999999999999999754 3566788888899999999887765442 457999999
Q ss_pred HHHHHHHHHHHHHHH
Q 014067 75 GISTATILLSIPIFL 89 (431)
Q Consensus 75 ~i~~i~~~i~~iif~ 89 (431)
.+.++..++..+..+
T Consensus 198 ~~~~~~~~~~~~~~~ 212 (479)
T PRK10077 198 ASEAIPALLFLMLLY 212 (479)
T ss_pred HHHHHHHHHHHHHHH
Confidence 988877776654433
No 38
>TIGR00895 2A0115 benzoate transport.
Probab=99.13 E-value=7.4e-09 Score=102.84 Aligned_cols=81 Identities=20% Similarity=0.299 Sum_probs=67.7
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.++|.|...|...+.+.|.++++ +|..+++++..+.++|..+++.+.+++.++.||+..|.+.++..
T Consensus 108 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 181 (398)
T TIGR00895 108 LLILRFLAGLGLGGLMPNLNALVSEYAPKR------FRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAP 181 (398)
T ss_pred HHHHHHHHhcccccchhhHHHHHHHHcCHH------hhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHH
Confidence 456778899999999999999999998643 36778999999999999999999999999999999999887555
Q ss_pred HHHHHHH
Q 014067 82 LLSIPIF 88 (431)
Q Consensus 82 ~i~~iif 88 (431)
++..++.
T Consensus 182 ~~~~~~~ 188 (398)
T TIGR00895 182 LLLLLLL 188 (398)
T ss_pred HHHHHHH
Confidence 5544433
No 39
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.12 E-value=2.9e-09 Score=109.39 Aligned_cols=306 Identities=15% Similarity=0.110 Sum_probs=161.9
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.++|.|...|...+.+.|.++++ +|..++++++.+.++|..++|.+++++.+++||++.|.+.++..
T Consensus 93 l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~ 166 (485)
T TIGR00711 93 MIIFRVIQGFGGGPLIPLSFSTLLNIYPPE------KRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIG 166 (485)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHCCHH------HHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHH
Confidence 456777889999999999999999999643 36778999999999999999999999999999999999887766
Q ss_pred HHHHHHHHhcCcceeecCCCCCchhHHHH--------HHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcc-cccccccC
Q 014067 82 LLSIPIFLLGSPFYRNKIPTGSPLTTIFK--------VLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRD-EGNSNVKE 152 (431)
Q Consensus 82 ~i~~iif~~~~~~~~~~~p~~~~~~~~~~--------v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~ 152 (431)
++..++..+..+.-+ +.+.++...... .+.....+.. ...| +...+...
T Consensus 167 ~~~~~~~~~~~~~~~--~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~ 224 (485)
T TIGR00711 167 IIVVVVAFFILPRDK--PAASENFDFLGLLLLSVGLGSLLYGLSEGP--------------------ERGWFDSNEILIL 224 (485)
T ss_pred HHHHHHHHHHcCCcc--ccccCCCcHHHHHHHHHHHHHHHHHHhhCC--------------------CCCCCCchHHHHH
Confidence 666554433332211 111111110000 0000000000 0001 00000000
Q ss_pred CCCCCCCchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCc-c
Q 014067 153 KVPSQKPTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSL-K 231 (431)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~-~ 231 (431)
... ....-..+..+....+ .+.. +.+-.++ |.+ ....+...+....+....+..+....+ ..| . .
T Consensus 225 ~~~--~~~~~~~~~~~~~~~~--~~~~--~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~---~~g-~s~ 290 (485)
T TIGR00711 225 SIT--GLVAIIAFVVWELTDD--NPLV--DLRLFKY-RNF---TIGCVYMSLLGLGLYGSFYLLPLYLQQ---VLG-YTA 290 (485)
T ss_pred HHH--HHHHHHHHHHHHHcCC--CCcc--CHHHHcC-CCh---HHHHHHHHHHHHHHHHHHHHHHHHHHH---hcC-CCH
Confidence 000 0000000000000000 0100 0000000 111 111111222222222211111211111 111 1 0
Q ss_pred cCCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 014067 232 VPPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSE 311 (431)
Q Consensus 232 ip~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 311 (431)
...+.+.....+..++..|+..++.++. +..+-+.+|.++.+++...+.+.- +
T Consensus 291 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~-----------~~~~~~~~g~~~~~~~~~~~~~~~-------------~--- 343 (485)
T TIGR00711 291 LQAGLHILPVGLAPMLSSPIAGRMGDKI-----------DPRKLVTIGLILYAVGFYWRAFTF-------------T--- 343 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------CcHHHHHHHHHHHHHHHHHHhccC-------------C---
Confidence 1123445556666677777776654322 222335667777776666554210 0
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 312 PLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 312 ~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
...+.++++...++.++|..+..+.....+.+..|++.+|.++|++++...+|+.+|+.+.+.+-
T Consensus 344 -~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~ 408 (485)
T TIGR00711 344 -PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTIL 408 (485)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12345566667889999998888777788888899999999999999999999999887766553
No 40
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.12 E-value=4e-09 Score=103.87 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=62.7
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.++|.|...+...+...+.+++ +|..+.+++..+.++|.++++.+.+.+.+..||+..|.+.++..
T Consensus 94 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 166 (377)
T TIGR00890 94 LYLTYGLASAGVGIAYGIALNTAVKWFPD-------KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIF 166 (377)
T ss_pred HHHHHHHHhHHHHHHHHhHHHHHHHHcCc-------ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 45667788888888878887877777742 25668888999999999887777777777789999999988877
Q ss_pred HHHHHHHH
Q 014067 82 LLSIPIFL 89 (431)
Q Consensus 82 ~i~~iif~ 89 (431)
++..+..+
T Consensus 167 ~~~~~~~~ 174 (377)
T TIGR00890 167 LLVIVLGA 174 (377)
T ss_pred HHHHHHHH
Confidence 77655443
No 41
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.11 E-value=1.9e-08 Score=100.93 Aligned_cols=79 Identities=18% Similarity=0.198 Sum_probs=67.6
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+++...+.+++.|...|...+++.|+++++ +|..+.+++..+.|+|.+++|.+++++.+++||+..|.+.++..
T Consensus 111 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~------~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~ 184 (394)
T PRK10213 111 LLIGRACLGLALGGFWAMSASLTMRLVPPR------TVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMG 184 (394)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHcCHh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 466778889999999999999999999644 36778999999999999999999999999999999999887665
Q ss_pred HHHHH
Q 014067 82 LLSIP 86 (431)
Q Consensus 82 ~i~~i 86 (431)
++..+
T Consensus 185 ~~~~l 189 (394)
T PRK10213 185 VLCIF 189 (394)
T ss_pred HHHHH
Confidence 55443
No 42
>PRK10504 putative transporter; Provisional
Probab=99.11 E-value=3.7e-08 Score=101.06 Aligned_cols=84 Identities=13% Similarity=0.123 Sum_probs=69.5
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++.++.++|.|...|...+.+.|.++++ ++..+++++..+.++|..++|.+++++.++.||++.|.+.....
T Consensus 101 l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~ 174 (471)
T PRK10504 101 LLLARVLQGVGGAMMVPVGRLTVMKIVPRE------QYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVG 174 (471)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHH
Confidence 456778899999999999999999988533 35678899999999999999999999999999999999988776
Q ss_pred HHHHHHHHhc
Q 014067 82 LLSIPIFLLG 91 (431)
Q Consensus 82 ~i~~iif~~~ 91 (431)
.++.++....
T Consensus 175 ~l~~~~~~~~ 184 (471)
T PRK10504 175 IIGAIATLML 184 (471)
T ss_pred HHHHHHHHHh
Confidence 6666554443
No 43
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.10 E-value=1.9e-08 Score=100.01 Aligned_cols=80 Identities=21% Similarity=0.153 Sum_probs=63.2
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+++++++.++|.|.. ++..+..+++++++ +|.++.+++..+.++|.++++++++++.+++||+..|.+.++..
T Consensus 82 l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~------~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~ 154 (368)
T TIGR00903 82 LLACQLLAALGQPFL-LNAFAPAASQIREE------RRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVA 154 (368)
T ss_pred HHHHHHHHHhHhHHH-HHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 466788889999864 45555567887643 46788999999999999999999999999999999999877765
Q ss_pred HHHHHHH
Q 014067 82 LLSIPIF 88 (431)
Q Consensus 82 ~i~~iif 88 (431)
++..++.
T Consensus 155 ~~~~~~~ 161 (368)
T TIGR00903 155 AAGIILV 161 (368)
T ss_pred HHHHHHH
Confidence 5554433
No 44
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.10 E-value=2.1e-08 Score=101.65 Aligned_cols=112 Identities=12% Similarity=0.179 Sum_probs=77.4
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchh
Q 014067 237 LPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPIT 316 (431)
Q Consensus 237 l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s 316 (431)
+..+..+..++..|+..++. +|. ...+-+.+|.++.+++++...+.. .+
T Consensus 262 ~~~~~~i~~ii~~~~~~~l~----~r~-------g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~ 310 (437)
T TIGR00792 262 MGSIAIVAGLIGVLLFPRLV----KKF-------GRKILFAGGILLMVLGYLIFFFAG--------------------SN 310 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHh-------CcHHHHHHHHHHHHHHHHHHHHcc--------------------hh
Confidence 34455566666667766654 332 222335667777777666554421 13
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhcccC-------chhhhHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 014067 317 FLWVALQYLFLGSADLFTLAGMMEFFFTDAP-------LSMRSLATSLSWASLAMGYYFSTVLVSIVNNI 379 (431)
Q Consensus 317 ~~wli~~~~l~~igE~~~~~~~~~~~~~~aP-------~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~ 379 (431)
.++++...++.+++.....+...+++.+.+| ++.+|.++|++.+...+|..+++.+.+.+...
T Consensus 311 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~ 380 (437)
T TIGR00792 311 LPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI 380 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566788889998888888888888765 56789999999999999999999888877543
No 45
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.09 E-value=3.8e-09 Score=106.79 Aligned_cols=140 Identities=13% Similarity=0.087 Sum_probs=93.5
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+.+.+++.+..++..++.+++.+++.+ .+.+.++.++.+++++..++.
T Consensus 265 g~~~~~~~~~~~~~~~~~g~l~dr~g~-----------~~~~~~~~~l~~~~~~l~~~~--------------------- 312 (420)
T PRK09528 265 GYLNSFQVFLEALIMFFAPFIINRIGA-----------KNALLLAGTIMAVRIIGSGFA--------------------- 312 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCc-----------chhhHHHHHHHHHHHHHHHhc---------------------
Confidence 345566666666777777665533322 233666677777766665543
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHH-HHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSL-SWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSN 393 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl-~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~ 393 (431)
.++++++...++.+++.....+...+++.+..|++.++...+. +++...+|..+++.+.+.+.+.. +|
T Consensus 313 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~------G~----- 381 (420)
T PRK09528 313 TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI------GF----- 381 (420)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh------Cc-----
Confidence 2456677778888888877777888999999999999987655 66777889988888887765321 12
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhhc
Q 014067 394 LNHYHLERFYWLMCILGGLNFLHFLFWAAR 423 (431)
Q Consensus 394 ~n~~~l~~~f~~la~l~~v~~i~~~~~~~~ 423 (431)
...|..++++.++..++..+..|+
T Consensus 382 ------~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 382 ------QGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHhcC
Confidence 234677777776666655555443
No 46
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.09 E-value=6.7e-09 Score=102.89 Aligned_cols=79 Identities=23% Similarity=0.293 Sum_probs=63.2
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcc--------cccCchhH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIE--------DNKGWQWG 73 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~--------~~~g~~~~ 73 (431)
+++++.+.++|.|...+...+++.|.++++ +|....++...+.++|.++++.+.+.+. +.++|++.
T Consensus 99 ~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~ 172 (394)
T TIGR00883 99 LLLARLIQGFSLGGEWGGAALYLAEYAPPG------KRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIP 172 (394)
T ss_pred HHHHHHHHHhhccccccccHHHhhhcCCcc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHH
Confidence 456677888999999999999999998754 3567888889999999999998876653 35799999
Q ss_pred HHHHHHHHHHHHH
Q 014067 74 FGISTATILLSIP 86 (431)
Q Consensus 74 F~i~~i~~~i~~i 86 (431)
|.+.++..+++.+
T Consensus 173 ~~~~~~~~~~~~~ 185 (394)
T TIGR00883 173 FLVSAVLVLIGLY 185 (394)
T ss_pred HHHHHHHHHHHHH
Confidence 9887776665544
No 47
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.07 E-value=1.5e-08 Score=102.45 Aligned_cols=75 Identities=21% Similarity=0.367 Sum_probs=63.5
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.++|.|...+...++..|.++++ +|.++.+++..+.++|.++++.+.+++.+.+||+..|.+.++..
T Consensus 109 l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~ 182 (426)
T PRK12307 109 LTLSRFIVGMGMAGEYACASTYAVESWPKH------LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPV 182 (426)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhCCHh------HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHH
Confidence 466778899999999999999999998754 35668888899999999999999999999999999998865443
Q ss_pred H
Q 014067 82 L 82 (431)
Q Consensus 82 ~ 82 (431)
+
T Consensus 183 ~ 183 (426)
T PRK12307 183 L 183 (426)
T ss_pred H
Confidence 3
No 48
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.07 E-value=4.6e-08 Score=98.19 Aligned_cols=76 Identities=9% Similarity=-0.015 Sum_probs=62.8
Q ss_pred HHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHH
Q 014067 4 AGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILL 83 (431)
Q Consensus 4 ~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i 83 (431)
+.+.+.++|.|++.|...+++.|.++++ +|.++.+++....++|.++||.++|++.+. .|...|.+.+.+.++
T Consensus 93 ~~r~l~G~~~a~~~pa~~a~i~~~~~~~------~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~ 165 (393)
T PRK11195 93 LAYGLVGIGAAAYSPAKYGILTELLPGE------KLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLL 165 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 4567889999999999999999999754 467789999999999999999999999874 578787777666555
Q ss_pred HHH
Q 014067 84 SIP 86 (431)
Q Consensus 84 ~~i 86 (431)
+.+
T Consensus 166 ~~~ 168 (393)
T PRK11195 166 AAL 168 (393)
T ss_pred HHH
Confidence 543
No 49
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.07 E-value=2.9e-08 Score=100.84 Aligned_cols=77 Identities=23% Similarity=0.372 Sum_probs=61.7
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcc--------cccCchhH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIE--------DNKGWQWG 73 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~--------~~~g~~~~ 73 (431)
+++.+.+.++|.|+..|...++++|.++++ +|..+.++.+.+.+.|.++++.+...+. .++||+..
T Consensus 127 l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~------~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~ 200 (432)
T PRK10406 127 LLLARLFQGLSVGGEYGTSATYMSEVAVEG------RKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIP 200 (432)
T ss_pred HHHHHHHHHhhhhhhHhhHHHHHHHhCCCC------cccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHH
Confidence 456778899999999999999999998754 3556788889999999998887766554 25899999
Q ss_pred HHHHHHHHHHH
Q 014067 74 FGISTATILLS 84 (431)
Q Consensus 74 F~i~~i~~~i~ 84 (431)
|.+.++..++.
T Consensus 201 F~i~~~~~ll~ 211 (432)
T PRK10406 201 FALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHH
Confidence 99877765544
No 50
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.06 E-value=1.4e-08 Score=103.36 Aligned_cols=302 Identities=16% Similarity=0.181 Sum_probs=183.3
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccc-cCchhHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDN-KGWQWGFGISTAT 80 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~-~g~~~~F~i~~i~ 80 (431)
+.+.+++-+++.|...|++..+.+++.+++ | |..+.++.+.+..+|.+++..++|++.+. .||+..|.+.++.
T Consensus 131 ~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~---E---rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~ 204 (466)
T KOG2532|consen 131 LLVLRFLQGLGQGVLFPAIGSILAKWAPPN---E---RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIV 204 (466)
T ss_pred hHHHHHHhHHHHhHHHhhhhceeeeECCHH---H---HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHH
Confidence 356788899999999999999999999855 2 67789999999999999999999999998 9999999999998
Q ss_pred HHHHHHHHHhcCcceeecCCCCCchhH--HHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCC
Q 014067 81 ILLSIPIFLLGSPFYRNKIPTGSPLTT--IFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQK 158 (431)
Q Consensus 81 ~~i~~iif~~~~~~~~~~~p~~~~~~~--~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~ 158 (431)
.++..+++... |.+ .|+++|... ..+.+.. .+. . .+.
T Consensus 205 g~i~~~~w~~~---~~d-~P~~h~~is~~El~~I~~---~k~-~--------------~~~------------------- 243 (466)
T KOG2532|consen 205 GLIWFILWFLF---YSD-SPSKHPNISEKELKYIEK---GKS-E--------------AHV------------------- 243 (466)
T ss_pred HHHHHHHHHHH---hcC-CcccCCCCCHHHHHHHHh---ccc-c--------------ccc-------------------
Confidence 88877766543 323 454444321 1111100 000 0 000
Q ss_pred CchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHH-------HHhhcccchHHHHHHHhccCCCCcc
Q 014067 159 PTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLN-------CCLAQLSTFSVQQAATMNTKLGSLK 231 (431)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~-------~~~~Q~~t~~~~~~~~~~~~~gg~~ 231 (431)
+.+...|| |++++-.+++...+..+ ....+++ ..++ ++.++.
T Consensus 244 ------------~~~~~vP~-----------~~i~ts~~vwai~~~~f~~~~~~~~l~~y~P-------tY~~-~VL~f~ 292 (466)
T KOG2532|consen 244 ------------KKKPPVPY-----------KAILTSPPVWAIWISAFGGNWGFYLLLTYLP-------TYLK-EVLGFD 292 (466)
T ss_pred ------------CCCCCCCH-----------HHHHcCHHHHHHHHHHHHHHHHHHHHHHHhh-------HHHH-HHhCCC
Confidence 00011233 33333333333222211 1112222 2222 112222
Q ss_pred c-CCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHH--HHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 014067 232 V-PPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTG--LILSIVAMAVAALVEIKRKRVAVNSGLVN 308 (431)
Q Consensus 232 i-p~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G--~~l~~l~~~~~~~~~~~~~~~~~~~g~~~ 308 (431)
+ ..+++.+++.+...+...+.+.+-+++.+| ... .+..+|+.-. +...+++++.+++..
T Consensus 293 v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls---~t~~rkifn~i~~~~~ai~l~~l~~~~-------------- 354 (466)
T KOG2532|consen 293 VRETGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILS---ETTVRKIFNTIAFGGPAVFLLVLAFTS-------------- 354 (466)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCc---hHhHHHHHHhHHHHHHHHHHHeeeecC--------------
Confidence 2 467788899999989888999988888776 332 3455565433 333333344444331
Q ss_pred CCCCcchhHHHHHHHHHHHHhhhhhhh--hhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCC
Q 014067 309 SSEPLPITFLWVALQYLFLGSADLFTL--AGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHT 386 (431)
Q Consensus 309 ~~~~~~~s~~wli~~~~l~~igE~~~~--~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~ 386 (431)
++ .. |. +.++++++..+.. ..|..--....-+++.+.+||+.+...+++..++|.+++.+.+ .+ +.+
T Consensus 355 ~~--~~----~~--a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~~--t~~ 423 (466)
T KOG2532|consen 355 DE--HR----LL--AVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVT-DN--TRE 423 (466)
T ss_pred CC--cc----hH--HHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeC-CC--CHH
Confidence 10 01 12 2333444443332 2332222223135677899999999999999999999988753 11 112
Q ss_pred CCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 014067 387 PWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWA 421 (431)
Q Consensus 387 ~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~ 421 (431)
+|- ..|++.+++.++..++|.+.+
T Consensus 424 eW~-----------~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 424 EWR-----------IVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHH-----------HHHHHHHHHHHHhchheeEee
Confidence 343 678999999999998888874
No 51
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.04 E-value=9.3e-08 Score=95.68 Aligned_cols=80 Identities=16% Similarity=0.015 Sum_probs=62.7
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.+++.|...+...++..|.++++ ++..+.+++..+.++|.+++|.+++++.++.||+..|.+.++..
T Consensus 99 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~ 172 (394)
T PRK11652 99 LIAASAIQGLGTGVGGVMARTLPRDLYEGT------QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLG 172 (394)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHH
Confidence 355667778888887777778888877543 35567788888999999999999999998899999999887766
Q ss_pred HHHHHH
Q 014067 82 LLSIPI 87 (431)
Q Consensus 82 ~i~~ii 87 (431)
++..++
T Consensus 173 ~~~~~~ 178 (394)
T PRK11652 173 AGVTFS 178 (394)
T ss_pred HHHHHH
Confidence 655443
No 52
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.03 E-value=4.1e-08 Score=97.99 Aligned_cols=80 Identities=13% Similarity=0.165 Sum_probs=65.7
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.+++.|...+...+...+.++++ +|.+.++++..+.++|..+++.+++++.+..||++.|.+.++..
T Consensus 94 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~ 167 (382)
T PRK10091 94 LAIGRLVSGFPHGAFFGVGAIVLSKIIKPG------KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFN 167 (382)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCChH------HhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHH
Confidence 466778889998988888888888887543 35567888889999999999999999999899999999988876
Q ss_pred HHHHHH
Q 014067 82 LLSIPI 87 (431)
Q Consensus 82 ~i~~ii 87 (431)
++..+.
T Consensus 168 ~~~~~~ 173 (382)
T PRK10091 168 IAVLAS 173 (382)
T ss_pred HHHHHH
Confidence 665543
No 53
>PRK09952 shikimate transporter; Provisional
Probab=99.03 E-value=9.8e-08 Score=97.22 Aligned_cols=76 Identities=22% Similarity=0.280 Sum_probs=59.3
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcc--------cccCchhH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIE--------DNKGWQWG 73 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~--------~~~g~~~~ 73 (431)
+++.+.+.++|.|+.-|+..+.+.+.++++ +|....+....+.++|.+++..+..++. +++||+..
T Consensus 128 l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~------~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~ 201 (438)
T PRK09952 128 LVTLRAIQGFAVGGEWGGAALLAVESAPKN------KKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIP 201 (438)
T ss_pred HHHHHHHHHhhhcccHHHHHHHHHHhCCCC------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHH
Confidence 455677899999999999999999998754 2455667778888899888877766654 35899999
Q ss_pred HHHHHHHHHH
Q 014067 74 FGISTATILL 83 (431)
Q Consensus 74 F~i~~i~~~i 83 (431)
|.+.++..++
T Consensus 202 f~~~~~~~l~ 211 (438)
T PRK09952 202 FLFSIVLVLI 211 (438)
T ss_pred HHHHHHHHHH
Confidence 9988776544
No 54
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.01 E-value=7.2e-08 Score=96.71 Aligned_cols=78 Identities=10% Similarity=0.277 Sum_probs=62.5
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccccc-CchhHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNK-GWQWGFGISTAT 80 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~-g~~~~F~i~~i~ 80 (431)
++++.++.++|.|...+...+.+.++++ + +|..+.+++..+.++|..+++.+++++.++. +|+..|.+.++.
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~------~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-Q------RTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-c------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 4677889999999999999999988885 2 2566888888999999999999999988875 899888765555
Q ss_pred HHHHHH
Q 014067 81 ILLSIP 86 (431)
Q Consensus 81 ~~i~~i 86 (431)
.++.++
T Consensus 173 ~~~~~~ 178 (393)
T PRK09705 173 AVVALF 178 (393)
T ss_pred HHHHHH
Confidence 444433
No 55
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.01 E-value=2e-08 Score=100.19 Aligned_cols=79 Identities=23% Similarity=0.338 Sum_probs=65.1
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccC--chhHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKG--WQWGFGISTA 79 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g--~~~~F~i~~i 79 (431)
++++..+.++|.|...+...++..|.++++ +|..+.+++..+.++|..+++.+++.+.+..+ |+..|.+.++
T Consensus 103 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~ 176 (405)
T TIGR00891 103 MFIARLVIGIGMGGEYGSSAAYVIESWPKH------LRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISIL 176 (405)
T ss_pred HHHHHHHHHhhhhhhhHHHHHHHHHhCChh------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHH
Confidence 456778899999999999999999999754 36778999999999999999999999887766 9999988666
Q ss_pred HHHHHHH
Q 014067 80 TILLSIP 86 (431)
Q Consensus 80 ~~~i~~i 86 (431)
..++..+
T Consensus 177 ~~~~~~~ 183 (405)
T TIGR00891 177 PIIFALW 183 (405)
T ss_pred HHHHHHH
Confidence 5555433
No 56
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.01 E-value=1.1e-07 Score=97.23 Aligned_cols=80 Identities=11% Similarity=0.138 Sum_probs=58.6
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHH-HHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGA-LIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~-~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++.+.+.+++.|...|...+...++++++ +|..+.++++.+.++|. ++++++...+....||+..|.+.++..
T Consensus 124 ~~~~~l~gi~~g~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~ 197 (452)
T PRK11273 124 FVLLFLCGWFQGMGWPPCGRTMVHWWSQK------ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAA 197 (452)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHhCChH------HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 44556778889988898888899988643 36678899999999986 556665433433459999999988776
Q ss_pred HHHHHHH
Q 014067 82 LLSIPIF 88 (431)
Q Consensus 82 ~i~~iif 88 (431)
++..++.
T Consensus 198 ~~~~~l~ 204 (452)
T PRK11273 198 ILVALFA 204 (452)
T ss_pred HHHHHHH
Confidence 6654433
No 57
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.01 E-value=6.7e-08 Score=96.40 Aligned_cols=56 Identities=11% Similarity=0.100 Sum_probs=48.1
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 322 LQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 322 ~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
...++.++++....|.....+.+.+|++.++...+.+++..++|..+|+.+.+.+.
T Consensus 290 ~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~ 345 (381)
T PRK03633 290 PALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLM 345 (381)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567788888889999999999999988888888888888999999999988775
No 58
>TIGR00898 2A0119 cation transport protein.
Probab=99.00 E-value=7.3e-08 Score=99.76 Aligned_cols=79 Identities=19% Similarity=0.261 Sum_probs=63.9
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+++..++.++|.|+..+...+++.|.++++ +|..+.+++..+.++|.++++.++.++.+ |+..|.+.++..
T Consensus 183 ~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~ 253 (505)
T TIGR00898 183 FLVFRLLVGMGIGGIWVQAVVLNTEFLPKK------QRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPT 253 (505)
T ss_pred HHHHHHHHHhhccchHHHHHHHhheecChh------hhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHH
Confidence 467788899999999999999999999754 35567777788889999999988877654 999999888877
Q ss_pred HHHHHHHH
Q 014067 82 LLSIPIFL 89 (431)
Q Consensus 82 ~i~~iif~ 89 (431)
++..+..+
T Consensus 254 ~~~~~~~~ 261 (505)
T TIGR00898 254 FLFFLLSW 261 (505)
T ss_pred HHHHHHHH
Confidence 76655443
No 59
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.00 E-value=9.4e-09 Score=100.48 Aligned_cols=304 Identities=13% Similarity=0.044 Sum_probs=169.4
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhh--hhcccccCchhHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFV--VWIEDNKGWQWGFGISTA 79 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~--~~l~~~~g~~~~F~i~~i 79 (431)
+.+-.++.+.-+|.--|.....++.+|+++ +|.+..++.-.+-|+|+.+.|+++ +++..+++|+.+|.+|++
T Consensus 120 ~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~------eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgi 193 (448)
T COG2271 120 FAVLWVLNGWFQGMGWPPCARTITHWFSRK------ERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGI 193 (448)
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHcCcc------ccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHH
Confidence 345556788888999999999999999865 267778888999999999999999 999999999999999998
Q ss_pred HHHHH-HHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCC
Q 014067 80 TILLS-IPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQK 158 (431)
Q Consensus 80 ~~~i~-~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~ 158 (431)
..++. ++.+..+|. .|+..-++++.+ .++ |..... +
T Consensus 194 iaiival~~~~~~rd-----~Pqs~GLP~ie~-----~~~--------------------------d~~e~~-~------ 230 (448)
T COG2271 194 IAIIVALILLFLLRD-----RPQSEGLPPIEE-----YRG--------------------------DPLEIY-E------ 230 (448)
T ss_pred HHHHHHHHHHHHhCC-----CccccCCCCHHH-----hhc--------------------------Cchhhh-h------
Confidence 66654 444444432 233211111100 000 000000 0
Q ss_pred CchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHh------hcccchHHHHHHHhccCCCCccc
Q 014067 159 PTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCL------AQLSTFSVQQAATMNTKLGSLKV 232 (431)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~------~Q~~t~~~~~~~~~~~~~gg~~i 232 (431)
++++..+. +..| .-+|.+++--.+|...+.+..+| .+....+..+..+.+..
T Consensus 231 ------------~~~~~~~l---s~~~-i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~------ 288 (448)
T COG2271 231 ------------EEKENEGL---TAWQ-IFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLV------ 288 (448)
T ss_pred ------------hhccCCCc---cHHH-HHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHH------
Confidence 00000000 0010 11334444333444444444443 33444555554444432
Q ss_pred CCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Q 014067 233 PPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEP 312 (431)
Q Consensus 233 p~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~ 312 (431)
...+..++-...-+....+.+|+.+++.+.+ |.-.+++++.+-++..... ..++
T Consensus 289 ~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr-----------R~p~~~i~~~~i~~~~~~~-----w~~~---------- 342 (448)
T COG2271 289 KANWAISLFEVAGLPGTLLAGWLSDKLFKGR-----------RGPMALIFMLLITASLVLY-----WLAP---------- 342 (448)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcccc-----------cchHHHHHHHHHHHHHHHH-----HcCC----------
Confidence 3444445555666777778889888886532 1222333222222111111 0110
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhh--hhhhcccCchhhhHHHHHHHHHHHH-HHHHhhhhhhhhccccccCCCCCCC
Q 014067 313 LPITFLWVALQYLFLGSADLFTLAGMM--EFFFTDAPLSMRSLATSLSWASLAM-GYYFSTVLVSIVNNITSTYRHTPWL 389 (431)
Q Consensus 313 ~~~s~~wli~~~~l~~igE~~~~~~~~--~~~~~~aP~~~~g~~~gl~~l~~~i-G~~l~~~l~~~~~~~~~~~~~~~w~ 389 (431)
..|.+ +..-++..+|-...-|..+ -.+.+.+|++..|++.|+..+..-+ |..++....+.+.+. .+|.
T Consensus 343 -~~~~~--l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~------~gW~ 413 (448)
T COG2271 343 -NGSYL--LDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT------WGWD 413 (448)
T ss_pred -CccHH--HHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec------CCCc
Confidence 01222 2223344444444333321 2456789999999999999998888 888888877776432 2565
Q ss_pred cCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014067 390 FGSNLNHYHLERFYWLMCILGGLNFLHFLFWAA 422 (431)
Q Consensus 390 ~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~ 422 (431)
..|.++.+-++++.++++...+
T Consensus 414 -----------g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 414 -----------GGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHh
Confidence 3455555555666555555544
No 60
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.00 E-value=1.8e-08 Score=99.19 Aligned_cols=83 Identities=12% Similarity=0.183 Sum_probs=67.5
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHh-hhhhhcccccCchhHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAV-TFVVWIEDNKGWQWGFGISTAT 80 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~-~~~~~l~~~~g~~~~F~i~~i~ 80 (431)
+++++.+.+++.|...|...+++.|.++++ +|..++++...+.++|..+++ ++++.+.+..+|+..|.+.++.
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (379)
T TIGR00881 86 MAALWALNGIFQGMGWPPCGRTVTKWFSRS------ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGII 159 (379)
T ss_pred HHHHHHHHHhhccccCCchHHHHHHhcCHh------hheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence 456777889999999999999999999754 356678888999999999999 5777777888999999988877
Q ss_pred HHHHHHHHHh
Q 014067 81 ILLSIPIFLL 90 (431)
Q Consensus 81 ~~i~~iif~~ 90 (431)
.++..++.+.
T Consensus 160 ~~~~~~~~~~ 169 (379)
T TIGR00881 160 AIIVSLICFL 169 (379)
T ss_pred HHHHHHHHhe
Confidence 7665554433
No 61
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.99 E-value=8.4e-08 Score=97.32 Aligned_cols=302 Identities=10% Similarity=0.115 Sum_probs=175.5
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhc----ccc---cCchhHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWI----EDN---KGWQWGFG 75 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l----~~~---~g~~~~F~ 75 (431)
++...+..++...+.-+..+++.|..++++ +|.+..++...+.++|.++...+.+.+ .+. .+|+..+.
T Consensus 107 ~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 107 FVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 344556788888899999999999987654 355677777778888886555555544 322 16888888
Q ss_pred HHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcc-cccccccCCC
Q 014067 76 ISTATILLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRD-EGNSNVKEKV 154 (431)
Q Consensus 76 i~~i~~~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~a~~~~~~~ 154 (431)
+.++..++..++..+..|+- ++++++++ +..++ +.
T Consensus 182 v~~iv~~v~~~i~~~~~ke~-~~~~~~~~-----------------------------------~~~~~~~~-------- 217 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKER-SVEVTEQE-----------------------------------KKISLRDS-------- 217 (428)
T ss_pred HHHHHHHHHhhhhhheeeec-cccccccc-----------------------------------cccccccc--------
Confidence 77777777766665554430 00000000 00000 00
Q ss_pred CCCCCchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHH-HhccCCCCcccC
Q 014067 155 PSQKPTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAA-TMNTKLGSLKVP 233 (431)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~-~~~~~~gg~~ip 233 (431)
++. . .++ |. +..++....+.+....-..+...+..+ .+..+ + -
T Consensus 218 -----------------------~~~--~--~~n-r~---~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~----~ 261 (428)
T PF13347_consen 218 -----------------------LRS--L--FRN-RP---FRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-G----L 261 (428)
T ss_pred -----------------------hhh--h--ccc-ch---HHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-h----h
Confidence 000 0 011 11 122333344444444433433333322 22211 1 1
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.+.+..+..+..++..|+..++. +|.++ .+-+..|.++.+++.+...+..
T Consensus 262 ~~~~~~~~~~~~~v~~~~~~~l~----~r~gk-------~~~~~~~~~~~~~~~~~~~~~~------------------- 311 (428)
T PF13347_consen 262 ISIFMLIFFVASIVGSPLWGRLS----KRFGK-------KKVYIIGLLLAALGFLLLFFLG------------------- 311 (428)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH----HHccc-------eeehhhhHHHHHHHHHHHHHHH-------------------
Confidence 23333444555566666665554 44322 2346678888888888776663
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-------hhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCC
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPL-------SMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHT 386 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~-------~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~ 386 (431)
+.+.+++.+..++.+++-....+...++..+..+. +..|+++|++.+...+|..+++.+.+.+-...+
T Consensus 312 ~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G----- 386 (428)
T PF13347_consen 312 PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG----- 386 (428)
T ss_pred hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC-----
Confidence 24678888999999999999999999999988874 567999999999999999999888776654332
Q ss_pred CCCcCCC--CCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 014067 387 PWLFGSN--LNHYHLERFYWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 387 ~w~~~~~--~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
+. ++. .++..+.....+.+.+..+..++-.++.++|+.
T Consensus 387 -y~-~~~~~q~~~~~~~i~~~~~~~p~~~~~~~~i~~~~y~l 426 (428)
T PF13347_consen 387 -YD-ANAAVQSASALSGIRILFSIVPAIFLLLAIIFMRFYPL 426 (428)
T ss_pred -cC-CCcCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 21 221 222233333444444445554444566666664
No 62
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.99 E-value=1.1e-07 Score=101.98 Aligned_cols=81 Identities=9% Similarity=0.039 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHH
Q 014067 276 IGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLAT 355 (431)
Q Consensus 276 i~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~ 355 (431)
+.+++++.+++.+..++.. +..+++...++.++......+....++.+..|.+.|+..+
T Consensus 628 l~~~~~lsai~~ll~~~~~---------------------s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~ 686 (742)
T TIGR01299 628 LAGSMVLSCISCFFLSFGN---------------------SESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAF 686 (742)
T ss_pred HHHHHHHHHHHHHHHHHHc---------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 5677777777776665542 2234445556777777777788889999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhc
Q 014067 356 SLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 356 gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
|+......+|..+|+.+++.+.
T Consensus 687 Gi~~~~~rlGaiigp~i~g~L~ 708 (742)
T TIGR01299 687 GFLNALCKAAAVLGILIFGSFV 708 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987653
No 63
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.99 E-value=1e-07 Score=93.97 Aligned_cols=84 Identities=15% Similarity=0.162 Sum_probs=75.0
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+.+++++.++..|.+.+-..+..+|..+++ ||.++..+.+.+..+.-.+|..++.++.|.+||+..|.+.++..
T Consensus 104 Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~------~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ 177 (394)
T COG2814 104 LLLARALAGLAHGVFWSIAAALAARLVPPG------KRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLA 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcc------chhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHH
Confidence 568899999999999999999999999876 47889999999999999999999999999999999999888887
Q ss_pred HHHHHHHHhc
Q 014067 82 LLSIPIFLLG 91 (431)
Q Consensus 82 ~i~~iif~~~ 91 (431)
++.++..+..
T Consensus 178 ll~~~~~~~~ 187 (394)
T COG2814 178 LLALLLLWKL 187 (394)
T ss_pred HHHHHHHHHh
Confidence 7777655443
No 64
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.98 E-value=6.6e-08 Score=109.99 Aligned_cols=263 Identities=11% Similarity=0.030 Sum_probs=146.2
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccc--------c-Cchh
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDN--------K-GWQW 72 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~--------~-g~~~ 72 (431)
+++++++.+++.|.+.|...++++|.++++ +|..+++++..+.++|.++|+.+++++.+. + +|.+
T Consensus 106 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~ 179 (1146)
T PRK08633 106 AFAVTFLLGAQSAIYSPAKYGIIPELVGKE------NLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIA 179 (1146)
T ss_pred HHHHHHHHHHHHHhhchHHHhhhHHhcCcc------cchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchH
Confidence 466777889999999999999999999764 367789999999999999999999998765 2 2333
Q ss_pred HHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccC
Q 014067 73 GFGISTATILLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKE 152 (431)
Q Consensus 73 ~F~i~~i~~~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~ 152 (431)
.+.+.++...+..+++.+..+. .|..++... ++ .. ..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----------~~-------------------~~---~~------- 216 (1146)
T PRK08633 180 PAGLVLLAVAVLGLIFAYRLPK----VPAAAPEVF----------DK-------------------KK---YL------- 216 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhcCcC----CCCCCcccc----------cc-------------------cc---cc-------
Confidence 4333333333222222221111 111100000 00 00 00
Q ss_pred CCCCCCCchhHHHHhhhccCCCCCCccccccchhhHHHHHH---hHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCC
Q 014067 153 KVPSQKPTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVV---KIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGS 229 (431)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~---~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg 229 (431)
.. .+..+..+.++ .+..+.+...+++.......+.+.... ...+|
T Consensus 217 ------------------------~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g- 264 (1146)
T PRK08633 217 ------------------------FP----KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYA---KEVLG- 264 (1146)
T ss_pred ------------------------cH----HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHH---HHHhC-
Confidence 00 00000011111 111122222233332222222222111 11112
Q ss_pred ccc--CCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 014067 230 LKV--PPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLV 307 (431)
Q Consensus 230 ~~i--p~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~ 307 (431)
... ..+++.+...+..++..++.++ +.+|. ...+.+.+|.++.+++.+..++.
T Consensus 265 ~s~~~~~g~~~~~~~ig~~~g~~~~g~----l~~r~-------~~~~~~~~~~~~~~~~~~~~~~~-------------- 319 (1146)
T PRK08633 265 LDNTFQVQYLLAASAIGIGIGSLLAGR----LSGRH-------IELGLVPLGALGLALSLFLLPTA-------------- 319 (1146)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHH----HhCCc-------eEccchhHHHHHHHHHHHHHHHh--------------
Confidence 100 1233344444444444444444 33432 22234556666666666555443
Q ss_pred CCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 308 NSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 308 ~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.++++...++.+++..+..+....++.+.+|++.||.++|+.++...+|..+++.++.++.
T Consensus 320 -------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 320 -------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred -------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 245667777889999999988889999999999999999999999999999887777766553
No 65
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.98 E-value=2.6e-07 Score=94.30 Aligned_cols=295 Identities=12% Similarity=0.031 Sum_probs=162.8
Q ss_pred HHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhc--ccc-------------cCch
Q 014067 7 YIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWI--EDN-------------KGWQ 71 (431)
Q Consensus 7 ~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l--~~~-------------~g~~ 71 (431)
.+.-++.....+...++++|..++++. +++.+++|+.+..|+|+++|+.++++. .+. .+++
T Consensus 122 ~lld~~~n~~~~p~rALiaDl~p~~~~----~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (477)
T TIGR01301 122 WILDVANNMLQGPCRAFLADLTGGDAR----RTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLK 197 (477)
T ss_pred HHHHHHHHHHHHHHHHhcccccCchhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHH
Confidence 344457777888889999999987642 345789999999999999999999875 211 1678
Q ss_pred hHHHHHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCccccccccc
Q 014067 72 WGFGISTATILLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVK 151 (431)
Q Consensus 72 ~~F~i~~i~~~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~ 151 (431)
..|.+.++.++++.++-.+.-|+.+..++++.+..+ ....++.+.+ .
T Consensus 198 ~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~----------------------------~~~~~~~~~~-~---- 244 (477)
T TIGR01301 198 SCFLIDIILLAILTYIALSAVKENPLIGSDDFINSE----------------------------AAPPSKHGEE-A---- 244 (477)
T ss_pred HHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhh----------------------------cccccccchh-h----
Confidence 899999999998877666544433210011000000 0000000000 0
Q ss_pred CCCCCCCCchhHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHH-hccCCC-C
Q 014067 152 EKVPSQKPTEDIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAAT-MNTKLG-S 229 (431)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~-~~~~~g-g 229 (431)
.+. ..++.. .+--|.+.+++..-++.-+=|..+-+..|.++-+.-. -+.+-. .
T Consensus 245 ------------~~~---------~i~~~~----~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~ 299 (477)
T TIGR01301 245 ------------FFG---------ELFGAF----KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAK 299 (477)
T ss_pred ------------hHH---------HHHHHH----HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhH
Confidence 000 000000 0111333344444444444445555555555433210 000000 0
Q ss_pred cc--cC-CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhh-HHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 014067 230 LK--VP-PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRI-GTGLILSIVAMAVAALVEIKRKRVAVNSG 305 (431)
Q Consensus 230 ~~--ip-~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki-~~G~~l~~l~~~~~~~~~~~~~~~~~~~g 305 (431)
++ +. ..+-...|.+... ++..++.++.++. ...++. .++.++.++|++...++.. .+++.+
T Consensus 300 y~~gvr~G~~~l~~~s~~~~----i~s~~l~~l~~~~-------g~~k~~~~~s~~~~~~~l~~~~~i~~----~~~~~~ 364 (477)
T TIGR01301 300 YDDGVRAGAFGLMLNSVVLG----ITSIGMEKLCRGW-------GAGKRLWGIVNIILAICLAATVLVTY----VAKNSR 364 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHh-------ccchhHHHHHHHHHHHHHHHHHHHHh----hhhccc
Confidence 00 00 0112223333322 3444444455543 222333 6888899999888877642 111100
Q ss_pred CCC--CCC-Ccchh-HHHHHHHHHHHHhhhhhhhhhhhhhhhcccCc--hhhhHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 014067 306 LVN--SSE-PLPIT-FLWVALQYLFLGSADLFTLAGMMEFFFTDAPL--SMRSLATSLSWASLAMGYYFSTVLVSIVNN 378 (431)
Q Consensus 306 ~~~--~~~-~~~~s-~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~--~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~ 378 (431)
..+ +.. ..+.. .+..+..+.+.|++-......=++++++..|+ +-.|.+||+.++...+...+.++..+.+.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~ 443 (477)
T TIGR01301 365 YYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQ 443 (477)
T ss_pred cccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000 01122 35677788999999999988889999999995 556999999999999999999887776543
No 66
>PRK03699 putative transporter; Provisional
Probab=98.96 E-value=1.9e-07 Score=93.69 Aligned_cols=81 Identities=10% Similarity=0.148 Sum_probs=63.2
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcc-cccCchhHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIE-DNKGWQWGFGISTAT 80 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~-~~~g~~~~F~i~~i~ 80 (431)
+++++.+.+++.|...+...+.+.+.++++ +|....+..+...++|+.++|.+.+++. ++.||+..|.+.++.
T Consensus 98 ~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~ 171 (394)
T PRK03699 98 FSIAMFVLGVVSGITMSIGTFLITHVYEGK------QRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLV 171 (394)
T ss_pred HHHHHHHHHHhhHhhccchhHHhhhhcccc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 345667888899999999999999998543 3456677778888999999999988764 467999999988877
Q ss_pred HHHHHHHH
Q 014067 81 ILLSIPIF 88 (431)
Q Consensus 81 ~~i~~iif 88 (431)
.++..++.
T Consensus 172 ~~~~~~~~ 179 (394)
T PRK03699 172 YVAIFILT 179 (394)
T ss_pred HHHHHHHH
Confidence 66655443
No 67
>PRK11043 putative transporter; Provisional
Probab=98.96 E-value=1.6e-07 Score=94.24 Aligned_cols=82 Identities=21% Similarity=0.250 Sum_probs=65.4
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.++|.+...+...++..|.++++ ++.+.++......++|..++|.+++++.+++||+..|.+.++..
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~ 170 (401)
T PRK11043 97 LLVLRFVQAVGVCSAAVIWQALVIDRYPAQ------KANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAIT 170 (401)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Confidence 345666777888877788888899988654 34567888888899999999999999999999999999888777
Q ss_pred HHHHHHHH
Q 014067 82 LLSIPIFL 89 (431)
Q Consensus 82 ~i~~iif~ 89 (431)
++..+..+
T Consensus 171 ~~~~~~~~ 178 (401)
T PRK11043 171 LLLILPTL 178 (401)
T ss_pred HHHHHHHH
Confidence 76655443
No 68
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.95 E-value=3e-07 Score=91.93 Aligned_cols=80 Identities=16% Similarity=0.111 Sum_probs=66.1
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATIL 82 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~ 82 (431)
+++..+.+++.+...+...+++.|.++++ +|.+++++++...++|..++|.+++++.+..||+..|.+.++..+
T Consensus 95 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~ 168 (392)
T PRK10473 95 LAGRFLQGIGAGCCYVVAFAILRDTLDDR------RRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGI 168 (392)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHH
Confidence 45667788888888888889999988644 367788999999999999999999998888999999999887777
Q ss_pred HHHHHH
Q 014067 83 LSIPIF 88 (431)
Q Consensus 83 i~~iif 88 (431)
+..++.
T Consensus 169 i~~~~~ 174 (392)
T PRK10473 169 LVLLLS 174 (392)
T ss_pred HHHHHH
Confidence 665543
No 69
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.94 E-value=6e-08 Score=99.58 Aligned_cols=81 Identities=11% Similarity=-0.035 Sum_probs=63.6
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccccc---CchhHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNK---GWQWGFGIST 78 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~---g~~~~F~i~~ 78 (431)
+++.+.+.++|.|..-|...+.++++++++ +|..+++++-.+.++|.++++.+..++.+.. +|+..|.+.+
T Consensus 125 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g 198 (467)
T PRK09556 125 MIALWALSGFFQSTGGPCSYSTITRWTPRR------KRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPS 198 (467)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHcCcc------ceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHH
Confidence 455667788999999999999999999865 3566788888999999999999888776543 6888898877
Q ss_pred HHHHHHHHHH
Q 014067 79 ATILLSIPIF 88 (431)
Q Consensus 79 i~~~i~~iif 88 (431)
+..++..++.
T Consensus 199 ~~~~~~~i~~ 208 (467)
T PRK09556 199 IIALIIGFIG 208 (467)
T ss_pred HHHHHHHHHH
Confidence 7666554433
No 70
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.94 E-value=2.1e-07 Score=96.25 Aligned_cols=76 Identities=21% Similarity=0.233 Sum_probs=58.4
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcc--------cccCchhH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIE--------DNKGWQWG 73 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~--------~~~g~~~~ 73 (431)
+.+.+++.++|.|+..|+..+++++.++++ +|..+.++...+.++|.++|+.+...+. .++||++.
T Consensus 121 l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~------~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~ 194 (490)
T PRK10642 121 LLLCKMAQGFSVGGEYTGASIFVAEYSPDR------KRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIP 194 (490)
T ss_pred HHHHHHHHHhHhHhhHHHHHHHHHHhCCCC------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHH
Confidence 466778899999999999999999999755 2455677778888888888876654432 26899999
Q ss_pred HHHHHHHHHH
Q 014067 74 FGISTATILL 83 (431)
Q Consensus 74 F~i~~i~~~i 83 (431)
|.+.++..++
T Consensus 195 f~i~~~~~l~ 204 (490)
T PRK10642 195 FFIALPLGII 204 (490)
T ss_pred HHHHHHHHHH
Confidence 9987654443
No 71
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.92 E-value=3.3e-07 Score=92.18 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=61.6
Q ss_pred HHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccc-cCchhHHHHHHHHHHHHH
Q 014067 7 YIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDN-KGWQWGFGISTATILLSI 85 (431)
Q Consensus 7 ~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~-~g~~~~F~i~~i~~~i~~ 85 (431)
.+.++..+...|...++..|..+++ +|.++.++..++.++|.++++.+.+++.+. .||+..|.+.++..++..
T Consensus 102 ~~~~~~~~~~~~~~~al~~~~~~~~------~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~ 175 (402)
T PRK11902 102 VLVAFLSASQDIVFDAYSTDVLHPE------ERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGA 175 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChh------hhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHH
Confidence 3456778888999999999998654 356788888899999999999999988875 599999999888776655
Q ss_pred HHH
Q 014067 86 PIF 88 (431)
Q Consensus 86 iif 88 (431)
+..
T Consensus 176 l~~ 178 (402)
T PRK11902 176 LTT 178 (402)
T ss_pred HHH
Confidence 533
No 72
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.91 E-value=1.8e-07 Score=96.61 Aligned_cols=75 Identities=24% Similarity=0.352 Sum_probs=63.0
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
++++..+.+++.++..+...+.+.|.++++ +|...+++++.+.++|.++++.+.+++.+++||+..|.+.++..
T Consensus 111 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~ 184 (496)
T PRK03893 111 LFIARLVIGMGMAGEYGSSATYVIESWPKH------LRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPI 184 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 456777888999999999999999999643 35678889999999999999999999999999999998755443
Q ss_pred H
Q 014067 82 L 82 (431)
Q Consensus 82 ~ 82 (431)
+
T Consensus 185 ~ 185 (496)
T PRK03893 185 I 185 (496)
T ss_pred H
Confidence 3
No 73
>PRK15075 citrate-proton symporter; Provisional
Probab=98.91 E-value=2.4e-07 Score=94.15 Aligned_cols=72 Identities=14% Similarity=0.183 Sum_probs=56.8
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhc--------ccccCchhH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWI--------EDNKGWQWG 73 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l--------~~~~g~~~~ 73 (431)
+++++.+.++|.|..-|+..++.+|.++++ +|.+..+++..+.|+|..+++.+++.+ .+++||+..
T Consensus 120 l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~------~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~ 193 (434)
T PRK15075 120 VLLGRLLQGFSAGVELGGVSVYLAEIATPG------RKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIP 193 (434)
T ss_pred HHHHHHHhhccccccHHHHHHHHHhhCCcc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHH
Confidence 356778889999999999999999999755 356778887888888887777776665 256899999
Q ss_pred HHHHHH
Q 014067 74 FGISTA 79 (431)
Q Consensus 74 F~i~~i 79 (431)
|.+..+
T Consensus 194 f~~~~~ 199 (434)
T PRK15075 194 FLIGCL 199 (434)
T ss_pred HHHHHH
Confidence 987544
No 74
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.90 E-value=1.9e-07 Score=95.01 Aligned_cols=81 Identities=10% Similarity=0.107 Sum_probs=63.8
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhh-cccccCchhHHHHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVW-IEDNKGWQWGFGISTATI 81 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~-l~~~~g~~~~F~i~~i~~ 81 (431)
++.+.+.+++.|...|.....+.|.++++ +|..++++++.+.++|..+++.+.+. +.++.+|+.+|.+.++..
T Consensus 122 ~~~~~l~g~~~g~~~~~~~~~i~~~~~~~------~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~ 195 (438)
T TIGR00712 122 FVLLFLNGWFQGMGWPPCGRTMVHWWSQS------ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICA 195 (438)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHhcCcc------cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 34566778888888888889999988754 36778999999999999998887765 444579999999988887
Q ss_pred HHHHHHHH
Q 014067 82 LLSIPIFL 89 (431)
Q Consensus 82 ~i~~iif~ 89 (431)
++..++.+
T Consensus 196 ~i~~~~~~ 203 (438)
T TIGR00712 196 IIVALFAF 203 (438)
T ss_pred HHHHHHHH
Confidence 77654443
No 75
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.89 E-value=1.1e-08 Score=101.00 Aligned_cols=83 Identities=14% Similarity=0.252 Sum_probs=73.3
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccC-chhHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKG-WQWGFGISTAT 80 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g-~~~~F~i~~i~ 80 (431)
+.+.+.++++|++.+.|..+++++|.|+++ +|.+.|.||||++++|+.+|.+.++++.+.-+ |+++|...++.
T Consensus 124 ~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~------~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl 197 (493)
T KOG1330|consen 124 VLLCRGFVGIGEASYSPIAPSLIADSFPDD------KRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVL 197 (493)
T ss_pred HHHHHHHhccchhhhcccchhHhhhcCcch------hhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHH
Confidence 456788999999999999999999999876 58899999999999999999999999988766 99999999998
Q ss_pred HHHHHHHHHh
Q 014067 81 ILLSIPIFLL 90 (431)
Q Consensus 81 ~~i~~iif~~ 90 (431)
+++..++..+
T Consensus 198 ~vi~~~L~~~ 207 (493)
T KOG1330|consen 198 GVIVGLLVFL 207 (493)
T ss_pred HHHHHHHHHh
Confidence 8887664433
No 76
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.87 E-value=5.6e-07 Score=90.48 Aligned_cols=70 Identities=11% Similarity=-0.029 Sum_probs=50.5
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHH-HHHhhhhhhcccccCchhHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGA-LIAVTFVVWIEDNKGWQWGFGIST 78 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~-~i~~~~~~~l~~~~g~~~~F~i~~ 78 (431)
++...+.++|.+..-+...+.+.+.++++ +|.++.+++..+.++|. ++++.+++++.+++||+..+....
T Consensus 109 ~~~~~i~G~g~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~ 179 (402)
T TIGR00897 109 LLFYGIRGLGYPLFAYSFLVWVVYNTKQD------NLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSAL 179 (402)
T ss_pred HHHHHHHHcchHHHHhHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 34455567777776666677777776543 36778899999999996 689999999988889665544433
No 77
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.87 E-value=9.9e-07 Score=89.14 Aligned_cols=81 Identities=11% Similarity=0.051 Sum_probs=65.4
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+++++++.++|.+..-+...+...|.++++ ++.+..+++..+.++|..+||.+++++.++.||++.|.+.++..
T Consensus 107 l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~ 180 (413)
T PRK15403 107 FLIARFIQGTSICFIATVGYVTVQEAFGQT------KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMG 180 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 456778888888876666667788888644 35567899999999999999999999998889999999988877
Q ss_pred HHHHHHH
Q 014067 82 LLSIPIF 88 (431)
Q Consensus 82 ~i~~iif 88 (431)
+++.+..
T Consensus 181 ~i~~~~~ 187 (413)
T PRK15403 181 LIAFVGL 187 (413)
T ss_pred HHHHHHH
Confidence 7766543
No 78
>PRK09848 glucuronide transporter; Provisional
Probab=98.86 E-value=5.6e-07 Score=91.83 Aligned_cols=89 Identities=10% Similarity=0.032 Sum_probs=68.2
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCch--
Q 014067 272 HLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLS-- 349 (431)
Q Consensus 272 ~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~-- 349 (431)
..+.+.+|.++.+++.+...+.. ..+.++++...++.++|+.+..+...++..+.+|++
T Consensus 293 ~~~~~~~g~~~~~i~~~~~~~~~-------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~ 353 (448)
T PRK09848 293 KKNTFLIGALLGTCGYLLFFWVS-------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEY 353 (448)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcC-------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 33557778887777766554321 235566667788999999999999999999988864
Q ss_pred -----hhhHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 014067 350 -----MRSLATSLSWASLAMGYYFSTVLVSIVNNI 379 (431)
Q Consensus 350 -----~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~ 379 (431)
.+|.++|++.+...+|..+|+.+.+.+-..
T Consensus 354 ~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 354 LTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred hhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 569999999999999999998887766433
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.84 E-value=2.7e-07 Score=92.51 Aligned_cols=82 Identities=11% Similarity=0.085 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHH
Q 014067 275 RIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLA 354 (431)
Q Consensus 275 ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~ 354 (431)
-+.+|.++.++++...... .+++++++..++.+++.........+...+..|++.+++.
T Consensus 286 ~l~~~~~l~~l~~~~~~~~---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~ 344 (396)
T TIGR00882 286 ALLIAGTIMSVRIIGSSFA---------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATI 344 (396)
T ss_pred hHHHHHHHHHHHHHHHHhc---------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEe
Confidence 3566777666655543332 3566777778889988877666777788888899998887
Q ss_pred HHH-HHHHHHHHHHHhhhhhhhhc
Q 014067 355 TSL-SWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 355 ~gl-~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+. +.....+|+.+++.+.+.+.
T Consensus 345 ~~~~~~~~~~lg~~~~~~l~G~l~ 368 (396)
T TIGR00882 345 YLIGFQFAKQLAMIFLSTLAGNMY 368 (396)
T ss_pred ehHHHHHHHHHHHHHHHHhHHHHH
Confidence 665 56778889998888877765
No 80
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.84 E-value=3.3e-07 Score=92.60 Aligned_cols=82 Identities=13% Similarity=0.185 Sum_probs=66.9
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccc------ccCchhHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIED------NKGWQWGFG 75 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~------~~g~~~~F~ 75 (431)
++++..+.++|.|..-|...+...+.++++ +|....+++..+.++|..+++.+++++.+ ..||++.|.
T Consensus 99 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~------~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~ 172 (412)
T TIGR02332 99 LYLLRILVGIAEAGFLPGILLYLTFWFPAY------FRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFL 172 (412)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHH
Confidence 567788999999999999999999999743 35678888899999999999999998753 469999999
Q ss_pred HHHHHHHHHHHHHH
Q 014067 76 ISTATILLSIPIFL 89 (431)
Q Consensus 76 i~~i~~~i~~iif~ 89 (431)
+.++..++..++..
T Consensus 173 ~~~~~~l~~~~~~~ 186 (412)
T TIGR02332 173 LEGFPSVILGVMTW 186 (412)
T ss_pred HHHHHHHHHHHHHh
Confidence 98777766554443
No 81
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.81 E-value=7.1e-07 Score=90.38 Aligned_cols=149 Identities=9% Similarity=0.078 Sum_probs=95.9
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchh
Q 014067 237 LPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPIT 316 (431)
Q Consensus 237 l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s 316 (431)
..+++.+..++..++.+++. +|. +..+-+.++.++.++++........ ...+
T Consensus 256 ~~~~~~i~~i~~~~~~g~l~----dr~-------g~r~~l~~~~~~~~v~~~l~~~~~~-----------------~~~~ 307 (418)
T TIGR00889 256 WMSLSQFSEIFFILTIPFFL----KRF-------GIKKVMLLSLVAWALRFGFFAYGDP-----------------EYFG 307 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHh-------CcHHHHHHHHHHHHHHHHHHHHcCc-----------------chhh
Confidence 34555555555555555544 442 2223466777777666655444210 0112
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHH-HHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCC
Q 014067 317 FLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSW-ASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLN 395 (431)
Q Consensus 317 ~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~-l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n 395 (431)
.+.++...++.++++.+..+....++.+..|++.||.++|+.+ ...++|+.+|+.+.+.+.+.++. ++.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~---------~~~- 377 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFA---------YGT- 377 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcc---------ccC-
Confidence 3345566789999999999999999999999999999999997 56789999999998877533210 000
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhcc
Q 014067 396 HYHLERFYWLMCILGGLNFLHFLFWAARY 424 (431)
Q Consensus 396 ~~~l~~~f~~la~l~~v~~i~~~~~~~~~ 424 (431)
...+.-|...+++.++..+++.++.|+-
T Consensus 378 -~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 378 -FDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 0123446667777777777666666543
No 82
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.78 E-value=5.2e-07 Score=88.94 Aligned_cols=77 Identities=22% Similarity=0.344 Sum_probs=59.4
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccccc--CchhHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNK--GWQWGFGISTA 79 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~--g~~~~F~i~~i 79 (431)
++++..+.++|.|...+...+...|.+++ +|.++.+++..+.++|..+++.+++.+.++. +|+..|.+.++
T Consensus 90 l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~ 162 (355)
T TIGR00896 90 LFAGTALIGVGIAIINVLLPSLIKRDFPQ-------RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWAL 162 (355)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHhCcc-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 34566778889888888888888877742 2566888999999999999999999887764 38999887766
Q ss_pred HHHHHH
Q 014067 80 TILLSI 85 (431)
Q Consensus 80 ~~~i~~ 85 (431)
..++..
T Consensus 163 ~~~~~~ 168 (355)
T TIGR00896 163 PALLAL 168 (355)
T ss_pred HHHHHH
Confidence 554443
No 83
>PRK09669 putative symporter YagG; Provisional
Probab=98.72 E-value=2.5e-06 Score=87.02 Aligned_cols=65 Identities=9% Similarity=0.059 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccC-------chhhhHHHHHHHHHHHHHHHHhhhhhhhhcccc
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAP-------LSMRSLATSLSWASLAMGYYFSTVLVSIVNNIT 380 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP-------~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~ 380 (431)
+.+.++...++.++++....+...+++.+.++ ++..|...|++.+...+|..+|+.+++.+-...
T Consensus 318 ~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 318 NVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44555666789999999999999999998886 455788899999988888888888877665433
No 84
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.70 E-value=3.4e-07 Score=94.08 Aligned_cols=81 Identities=15% Similarity=0.071 Sum_probs=67.1
Q ss_pred HHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHHH
Q 014067 5 GLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILLS 84 (431)
Q Consensus 5 ~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i~ 84 (431)
.+.+++++.+.......++..|+.+ +++ +......++.|.+.++|.++|+.++|++.+.++|+..|.+.++..++.
T Consensus 126 ~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~ 201 (468)
T TIGR00788 126 FIFLAALAKALYDVLVDSLYSERIR-ESP---SAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQ 201 (468)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHH
Confidence 5677889999999999999999998 332 134456778899999999999999999999999999999998888877
Q ss_pred HHHHH
Q 014067 85 IPIFL 89 (431)
Q Consensus 85 ~iif~ 89 (431)
.+...
T Consensus 202 ~~~~~ 206 (468)
T TIGR00788 202 LFVSN 206 (468)
T ss_pred HHHHH
Confidence 44333
No 85
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.68 E-value=8.4e-06 Score=84.53 Aligned_cols=79 Identities=18% Similarity=0.185 Sum_probs=63.2
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccc---------------
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIED--------------- 66 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~--------------- 66 (431)
+++++.+.++|.|+.-|....++.+.++++ +|..+.++++.+.++|.++++.++.++..
T Consensus 118 ~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~------~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 191 (502)
T TIGR00887 118 LCFWRFWLGVGIGGDYPLSAIITSEFATKK------WRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASC 191 (502)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhcChh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccc
Confidence 457888999999999999999999999865 36778889999999999999888765421
Q ss_pred --------ccCchhHHHHHHHHHHHHHH
Q 014067 67 --------NKGWQWGFGISTATILLSIP 86 (431)
Q Consensus 67 --------~~g~~~~F~i~~i~~~i~~i 86 (431)
+++|+..|.+.++..++..+
T Consensus 192 ~~~~~~~~~~~WR~~~~~~~ip~~i~~~ 219 (502)
T TIGR00887 192 TGSCVPAVDYMWRILIGFGAVPALLALY 219 (502)
T ss_pred cccccchhcccHHHHHHHHHHHHHHHHH
Confidence 24899999887776665444
No 86
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.67 E-value=6e-06 Score=80.14 Aligned_cols=83 Identities=12% Similarity=0.054 Sum_probs=65.5
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccc--------------
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDN-------------- 67 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~-------------- 67 (431)
+.+++.+++.|.+..++..++++++.-++++ +.+..|+.-.+..+|+++||++++.+..+
T Consensus 13 ~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~ 86 (310)
T TIGR01272 13 FLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANA 86 (310)
T ss_pred HHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhH
Confidence 5788999999999999999999999986553 45568888889999999999999977631
Q ss_pred --cCchhHHHHHHHHHHHHHHHHHh
Q 014067 68 --KGWQWGFGISTATILLSIPIFLL 90 (431)
Q Consensus 68 --~g~~~~F~i~~i~~~i~~iif~~ 90 (431)
..|++.|.+.++..++..+++.+
T Consensus 87 ~~~~~~~~yl~ia~~~~~~~i~~~~ 111 (310)
T TIGR01272 87 EAAKVHTPYLLLAGALAVLAIIFAF 111 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889998666665555554443
No 87
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.67 E-value=2e-06 Score=88.59 Aligned_cols=80 Identities=6% Similarity=0.024 Sum_probs=55.9
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccc---------ccCchhH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIED---------NKGWQWG 73 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~---------~~g~~~~ 73 (431)
++..++.++|.+..-+ ....+++.++++ +|..+.++.+...|+|+.+++.+.+.+.. ..||+..
T Consensus 128 ~~~r~l~G~~~~~~~~-~~~~i~~~~~~~------~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~ 200 (476)
T PLN00028 128 IAVRFFIGFSLATFVS-CQYWMSTMFNGK------IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIA 200 (476)
T ss_pred HHHHHHHHHHHHhhHH-HHHHHHHhcChh------heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHH
Confidence 4556677777776543 455678888644 36678888888888888888776665422 2589999
Q ss_pred HHHHHHHHHHHHHHHH
Q 014067 74 FGISTATILLSIPIFL 89 (431)
Q Consensus 74 F~i~~i~~~i~~iif~ 89 (431)
|.+.++..++..+..+
T Consensus 201 f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 201 FFVPGLLHIIMGILVL 216 (476)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998887776654443
No 88
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.66 E-value=4.8e-06 Score=83.25 Aligned_cols=55 Identities=9% Similarity=0.011 Sum_probs=42.2
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCc-hhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 323 QYLFLGSADLFTLAGMMEFFFTDAPL-SMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 323 ~~~l~~igE~~~~~~~~~~~~~~aP~-~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
..++.+++.-+..+.......+.+++ +.+|..+++.....++|..+++.+.+.+.
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~ 364 (390)
T TIGR02718 309 CSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLT 364 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555666667777777776 89999999999999999999999988775
No 89
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.65 E-value=7e-07 Score=94.68 Aligned_cols=246 Identities=11% Similarity=-0.047 Sum_probs=179.4
Q ss_pred HHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccC-chh-------HHH
Q 014067 4 AGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKG-WQW-------GFG 75 (431)
Q Consensus 4 ~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g-~~~-------~F~ 75 (431)
++++.++++.++.+++.+++.+++.+..++ +++++.+++|||..+.+.+.+ +++..+..... +.. -++
T Consensus 87 ~~l~gLaLia~G~GgiKp~vsaf~gdqf~~---~~~~~~~s~F~~fY~~iNiGS-lis~~i~~~l~~~~~~fg~~~~~~~ 162 (654)
T TIGR00926 87 LDLLGLALIALGTGGIKPCVSAFGGDQFEE---RQLSLRSRFFSFFYFAINAGS-LISTIITPILRGDVGCFGCQDCYPL 162 (654)
T ss_pred HHHHHHHHHHhhccccccCchhhhHhhcCc---cchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcccccCcchHH
Confidence 467789999999999999999999987753 556679999999999999865 44444443332 332 345
Q ss_pred HHHHHHHHHHHHHHhcCcceeecCCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCC
Q 014067 76 ISTATILLSIPIFLLGSPFYRNKIPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVP 155 (431)
Q Consensus 76 i~~i~~~i~~iif~~~~~~~~~~~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~ 155 (431)
..++.+++.++.++.+...++..++.+.+...+.++++......+.+. .. .+. .
T Consensus 163 aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~-------------~~-----~~~-------~- 216 (654)
T TIGR00926 163 AFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRF-------------ST-----RSE-------H- 216 (654)
T ss_pred HHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhh-------------cc-----CCc-------c-
Confidence 888889999999999887777666665544445555544433221100 00 000 0
Q ss_pred CCCCchhHHHHhhhccCCCCCCccc--cccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccC
Q 014067 156 SQKPTEDIKFLNRALRNNPAYPIVQ--CTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVP 233 (431)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip 233 (431)
....|.. .....+++++...+++.++...+.+|+.+.|.......+..++++..+.+...
T Consensus 217 ------------------~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~~l~g~ 278 (654)
T TIGR00926 217 ------------------WPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDGDVGGF 278 (654)
T ss_pred ------------------cchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcCccCCE
Confidence 0011111 12223467888999999999999999999999988899999999886654444
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRV 300 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~ 300 (431)
+...+.++.+-.++.+|+...+.+|+.++.+++ ..+++++.-+.+.++++.+.+++++..+...
T Consensus 279 ~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~---~~~ls~l~k~~iG~~la~la~~va~~ve~~~ 342 (654)
T TIGR00926 279 EIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKC---GTRFTSLRKMAVGGLLAALSFFVAALVQLKV 342 (654)
T ss_pred ecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhc---CCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556789999999999999999889999997554 5678889999999999999999998766543
No 90
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.57 E-value=6e-06 Score=85.01 Aligned_cols=116 Identities=12% Similarity=0.170 Sum_probs=74.2
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchh
Q 014067 237 LPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPIT 316 (431)
Q Consensus 237 l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s 316 (431)
+..++.+..++..|+..++. +|. ...+.+.+++++.+++.+.....- .. .+.+
T Consensus 271 ~~~~~~i~~ii~~~~~~~l~----~r~-------gkk~~~~~~~~~~~~~~~~~~~~~-----------~~-----~~~~ 323 (473)
T PRK10429 271 YLSYAGAANLVTLILFPRLV----KSL-------SRRILWAGASIFPVLSCGVLLLMG-----------LA-----APHN 323 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHc-------CcHHHHHHHHHHHHHHHHHHHHHh-----------cc-----Cchh
Confidence 34445555666666665543 442 222335556665555544433220 00 0123
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhcccC-------chhhhHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 014067 317 FLWVALQYLFLGSADLFTLAGMMEFFFTDAP-------LSMRSLATSLSWASLAMGYYFSTVLVSIVNNI 379 (431)
Q Consensus 317 ~~wli~~~~l~~igE~~~~~~~~~~~~~~aP-------~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~ 379 (431)
.++++...++.++++....+...+++.+.+| ++..|.+.|.+.+..-+|..+++.+.+.+-..
T Consensus 324 ~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 324 ALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666788899999999999999999977 45577799999999988888888877766433
No 91
>PRK10133 L-fucose transporter; Provisional
Probab=98.45 E-value=1.8e-05 Score=80.60 Aligned_cols=58 Identities=28% Similarity=0.328 Sum_probs=44.2
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcc
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIE 65 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~ 65 (431)
+++++++.++|.|...+..++++.|..+++ ++....+.+.....+|..+|+.+++.+.
T Consensus 120 ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~------~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 120 FLVGLFIIAAGLGCLETAANPFVTVLGPES------SGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCChh------hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788999999999999999999764322 2333467778888899999998877543
No 92
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.38 E-value=6e-06 Score=81.38 Aligned_cols=77 Identities=16% Similarity=0.206 Sum_probs=53.7
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccc----------ccCch
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIED----------NKGWQ 71 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~----------~~g~~ 71 (431)
++++..+.+++.+.+ +...+.++|.++++ +|..+.+++..+.|+|..+++.+.+.+.+ +.+|+
T Consensus 94 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~ 166 (366)
T TIGR00886 94 LLLLRLFIGIAGGSF-ASCMPWISFFFPKK------IQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWG 166 (366)
T ss_pred HHHHHHHHHHhchhh-HhHHHHHHHhcCHh------hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 456677788886665 45678889988644 35667888888888898888887776543 34899
Q ss_pred hHH-HHHHHHHHHHH
Q 014067 72 WGF-GISTATILLSI 85 (431)
Q Consensus 72 ~~F-~i~~i~~~i~~ 85 (431)
+.| .+.++...+..
T Consensus 167 ~~~~~~~~~~~~~~~ 181 (366)
T TIGR00886 167 WAFVIVPAGILLLPA 181 (366)
T ss_pred chhHHHHHHHHHHHH
Confidence 999 54444444433
No 93
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.37 E-value=3.6e-05 Score=77.77 Aligned_cols=81 Identities=17% Similarity=0.159 Sum_probs=61.8
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccc---------------
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIED--------------- 66 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~--------------- 66 (431)
+++++.+.++|.|...+..++.+.+..+++ ++.+..++.....++|+.+|+.+++.+..
T Consensus 97 ~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~ 170 (410)
T TIGR00885 97 FLVGLFILTAGLGFLETAANPYILVMGPES------TATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLS 170 (410)
T ss_pred HHHHHHHHHhhHHHHHhhhhHHHHHHCCHh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcC
Confidence 456777899999999999999998876543 23456778888999999999999887732
Q ss_pred -----------ccCchhHHHHHHHHHHHHHHHH
Q 014067 67 -----------NKGWQWGFGISTATILLSIPIF 88 (431)
Q Consensus 67 -----------~~g~~~~F~i~~i~~~i~~iif 88 (431)
..+|+..|.+.++..++..+++
T Consensus 171 ~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 171 PEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2469999988877666554443
No 94
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.35 E-value=0.00011 Score=72.44 Aligned_cols=89 Identities=15% Similarity=0.113 Sum_probs=70.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhH
Q 014067 274 QRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSL 353 (431)
Q Consensus 274 ~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~ 353 (431)
+.-.+|....++++....+... .-+.+.+.+..+++|+|--+.....++..-++++++..|+
T Consensus 276 ~~a~~G~~~~~~~f~lii~a~~------------------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~ 337 (403)
T PF03209_consen 276 RTAALGCLLGALAFALIILAGP------------------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGL 337 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh------------------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhH
Confidence 3344677777777766554420 1245667789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhcccc
Q 014067 354 ATSLSWASLAMGYYFSTVLVSIVNNIT 380 (431)
Q Consensus 354 ~~gl~~l~~~iG~~l~~~l~~~~~~~~ 380 (431)
.||+|...++++.-++..+++.+.++.
T Consensus 338 ~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 338 FMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888888877776544
No 95
>PRK03545 putative arabinose transporter; Provisional
Probab=98.31 E-value=1.1e-05 Score=80.53 Aligned_cols=136 Identities=12% Similarity=0.086 Sum_probs=96.5
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..+...+...++.++.+.+. +|. +..+-+..+.++.+++.+.+++.
T Consensus 47 g~~~~~~~~~~~~~~~~~g~l~----dr~-------g~r~~~~~~~~~~~~~~~~~~~~--------------------- 94 (390)
T PRK03545 47 GLMLTIYAWVVALMSLPLMLLT----SNV-------ERRKLLIGLFVLFIASHVLSALA--------------------- 94 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----cCC-------ChHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 3445555555566666665543 442 33345777888877777766654
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNL 394 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~ 394 (431)
.++++++...+++|+++....|....++.+..|++.|+..+|++....++|..+++.++..+... .+|-
T Consensus 95 ~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~------~gw~----- 163 (390)
T PRK03545 95 WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY------LGWR----- 163 (390)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH------hcHH-----
Confidence 35677778889999999998999999999999999999999999999999999999888776421 1232
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHH
Q 014067 395 NHYHLERFYWLMCILGGLNFLHFLF 419 (431)
Q Consensus 395 n~~~l~~~f~~la~l~~v~~i~~~~ 419 (431)
..|++.++++++..+....
T Consensus 164 ------~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 164 ------TTFLAIGGGALITLLLLIK 182 (390)
T ss_pred ------HHHHHHHHHHHHHHHHHHH
Confidence 3466666666655544333
No 96
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.30 E-value=2.5e-05 Score=78.83 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=87.1
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..+...+...+..++.+++.+++.+| +-+.+++++.+++.+..++.
T Consensus 46 g~~~s~~~~~~~~~~~~~g~l~dr~G~r-----------~~~~~~~~~~~~~~~~~~~~--------------------- 93 (412)
T TIGR02332 46 GLAATLFYAAYVICGIPSNIMLAIIGAR-----------RWIAGIMVLWGIASTATMFA--------------------- 93 (412)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhChH-----------HHHHHHHHHHHHHHHHHHHh---------------------
Confidence 3455666666667777777766544333 33667777777777776654
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.++++++...++.|++|....|....++.+..|++.|+..+|++....++|..+++.+++.+.
T Consensus 94 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 94 TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 246678888999999999999999999999999999999999999999999999999887664
No 97
>PRK11462 putative transporter; Provisional
Probab=98.27 E-value=0.00026 Score=72.60 Aligned_cols=78 Identities=12% Similarity=0.246 Sum_probs=51.4
Q ss_pred HHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccc-------cCchhHHHHHHHH
Q 014067 8 IVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDN-------KGWQWGFGISTAT 80 (431)
Q Consensus 8 li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~-------~g~~~~F~i~~i~ 80 (431)
+..++...+.-...++.++..++.+ +|.+..++...+.++|.++++.++..+.+. .||.....+.++.
T Consensus 118 ~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii 192 (460)
T PRK11462 118 LLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVV 192 (460)
T ss_pred HHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 4556667777788888888876543 367788888999999988877665433221 3566666666665
Q ss_pred HHHHHHHHHh
Q 014067 81 ILLSIPIFLL 90 (431)
Q Consensus 81 ~~i~~iif~~ 90 (431)
.++...+...
T Consensus 193 ~~i~~~i~~~ 202 (460)
T PRK11462 193 AFMMLAFCFF 202 (460)
T ss_pred HHHHHHHHHh
Confidence 5555444333
No 98
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.25 E-value=2.7e-06 Score=84.31 Aligned_cols=144 Identities=16% Similarity=0.212 Sum_probs=110.2
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+.+|..--+.-+++.|+.+.+- .| .+..+-|++|.++-.++.+..++..
T Consensus 71 Gll~~vf~v~~~i~sPl~gyLa----dr-------yNR~~v~~vG~~iW~~Av~~~~fs~-------------------- 119 (493)
T KOG1330|consen 71 GLLQTVFIVVFMIASPLFGYLA----DR-------YNRKRVIAVGIFIWTLAVFASGFSN-------------------- 119 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHHH----hh-------cCcceEEeeHHHHHHHHHHHHHHHH--------------------
Confidence 4456555566667888888754 33 2444568899998888887776652
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNL 394 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~ 394 (431)
..|-++..-.+.|+||...+|....++.+..|+..||+++|++++..-+|+.+|...+..+...+. .|=
T Consensus 120 -~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-----~Wr----- 188 (493)
T KOG1330|consen 120 -HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-----WWR----- 188 (493)
T ss_pred -HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-----ceE-----
Confidence 234456788999999999999999999999999999999999999999999999888888875542 242
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 014067 395 NHYHLERFYWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 395 n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
+-|+..++++++.+++..+..+.=++
T Consensus 189 ------~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 189 ------WAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred ------EEEEeehHHHHHHHHHHHhhccCccc
Confidence 34778888888887776666655444
No 99
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.23 E-value=0.00019 Score=76.62 Aligned_cols=84 Identities=12% Similarity=0.082 Sum_probs=70.3
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccccc-------------
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNK------------- 68 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~------------- 68 (431)
++++.++.++|.+...+...+++.|.++++ ++...+++++.+.++|.++|+++++++.+.+
T Consensus 175 ~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~------~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l 248 (633)
T TIGR00805 175 FLVSQLLRGIGATPIFPLGISYIDDFAKSK------NSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVIL 248 (633)
T ss_pred hHHHHHHHhccCCcchhcCchhhhccCCcc------ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCC
Confidence 568999999999999999999999999765 3677899999999999999999999887543
Q ss_pred ---------CchhHHHHHHHHHHHHHHHHHhc
Q 014067 69 ---------GWQWGFGISTATILLSIPIFLLG 91 (431)
Q Consensus 69 ---------g~~~~F~i~~i~~~i~~iif~~~ 91 (431)
+|+.+|.+.++..++..+.+++.
T Consensus 249 ~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 249 TPTDPRWIGAWWIGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 28899999988887766555443
No 100
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.17 E-value=5e-05 Score=75.17 Aligned_cols=140 Identities=11% Similarity=0.003 Sum_probs=99.1
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.+...+..++..|+.+++.++..+| +-+.++.++.+++.+..+..
T Consensus 43 g~~~~~~~~~~~~~~~~~g~l~d~~g~r-----------~~~~~~~~~~~~~~~~~~~~--------------------- 90 (385)
T TIGR00710 43 QMTLTLYLLGFAAGQLLWGPLSDRYGRR-----------PVLLLGLFIFALSSLGLALS--------------------- 90 (385)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhcCCh-----------HHHHHHHHHHHHHHHHHHHH---------------------
Confidence 4556666666777777777765443222 33666777777776665543
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNL 394 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~ 394 (431)
.+.++++...++.++++....+....++.+..|++.|+..+|++.....+|..+++.+++.+.... +|-
T Consensus 91 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------~~~----- 159 (385)
T TIGR00710 91 NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL------SWH----- 159 (385)
T ss_pred ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CHH-----
Confidence 245667778899999999999999999999999999999999999999999999998887664211 222
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhhc
Q 014067 395 NHYHLERFYWLMCILGGLNFLHFLFWAAR 423 (431)
Q Consensus 395 n~~~l~~~f~~la~l~~v~~i~~~~~~~~ 423 (431)
..|+..+++.++..+...+..++
T Consensus 160 ------~~~~~~~~~~~~~~~~~~~~~~~ 182 (385)
T TIGR00710 160 ------AIFAFLSLAGILLSALIFFILPE 182 (385)
T ss_pred ------HHHHHHHHHHHHHHHHHHHhCCC
Confidence 33556666666655554444433
No 101
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.17 E-value=8.9e-05 Score=76.78 Aligned_cols=112 Identities=13% Similarity=0.005 Sum_probs=88.4
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.+|..+...+...++.|+.+++.+++.+| +-+.+|.++.+++.+.++..
T Consensus 43 ~~~~~~~~~l~~~~~~~~~G~l~D~~Grk-----------~~l~~~~~~~~~~~~~~~~a-------------------- 91 (495)
T PRK14995 43 LLWIIDIYSLVMAGMVLPMGALGDRIGFK-----------RLLMLGGTLFGLASLAAAFS-------------------- 91 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccH-----------HHHHHHHHHHHHHHHHHHHc--------------------
Confidence 35666666777778888888877655443 34677888887777776654
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-cCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTD-APLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~-aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.++++++...+++|+|.....|.....+.+. .|++.|+..+|++.....+|..+|+.+++.+.
T Consensus 92 -~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~ 155 (495)
T PRK14995 92 -PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL 155 (495)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3567788889999999999988888877665 57899999999999999999999999998875
No 102
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.16 E-value=0.00065 Score=69.85 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=66.7
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhc------ccccCchhHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWI------EDNKGWQWGFGI 76 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l------~~~~g~~~~F~i 76 (431)
.+-..+.++-++..-|+....++.+|++++ +..-+.++|.+.++|..+|.+++..+ ....||++.|.+
T Consensus 138 ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI 211 (495)
T KOG2533|consen 138 IALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFII 211 (495)
T ss_pred HHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhH
Confidence 355778999999999999999999998652 44557888999999999999999885 335799999999
Q ss_pred HHHHHHHHHHHH
Q 014067 77 STATILLSIPIF 88 (431)
Q Consensus 77 ~~i~~~i~~iif 88 (431)
+|+.+++..++.
T Consensus 212 ~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 212 EGVITLVLGIVV 223 (495)
T ss_pred HHHHHHHHHheE
Confidence 999888776543
No 103
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.13 E-value=8.2e-05 Score=72.65 Aligned_cols=85 Identities=21% Similarity=0.205 Sum_probs=75.7
Q ss_pred ChhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHH
Q 014067 1 MLFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTAT 80 (431)
Q Consensus 1 ~~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~ 80 (431)
++++++.+=++|.+....+-.++++|-|+++. +|.++..+---.+.+|.++||..+|.+.|..|+++-|++.++.
T Consensus 161 ~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v 235 (464)
T KOG3764|consen 161 MLFVARSLQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIV 235 (464)
T ss_pred HHHHHHHHhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHH
Confidence 36788899999999999999999999998874 4678899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 014067 81 ILLSIPIFLL 90 (431)
Q Consensus 81 ~~i~~iif~~ 90 (431)
+++...+-++
T Consensus 236 ~Lld~~L~l~ 245 (464)
T KOG3764|consen 236 LLLDGALQLL 245 (464)
T ss_pred HHHHHHHHHh
Confidence 9987654444
No 104
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.13 E-value=6.4e-05 Score=77.16 Aligned_cols=112 Identities=7% Similarity=-0.028 Sum_probs=89.0
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.++..+...+..++..|+.+++.++..+| +-+.+|.++.+++.+.++..
T Consensus 39 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----------~~~~~~~~~~~~~~~~~~~~-------------------- 87 (485)
T TIGR00711 39 VQWVITSYMLANAISIPLTGWLAKRFGTR-----------RLFLISTFAFTLGSLLCGVA-------------------- 87 (485)
T ss_pred hhHHHHHHHHHHHHHHHhHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHhCc--------------------
Confidence 45667777778888888888876554333 33566777776666655443
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.++++++...++.|++.....|....++.+..|++.|+..+|++.....+|..+++.+++.+.
T Consensus 88 -~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 150 (485)
T TIGR00711 88 -PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII 150 (485)
T ss_pred -CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc
Confidence 256677888999999999999999999999999999999999999999999999999887764
No 105
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.12 E-value=0.00028 Score=70.50 Aligned_cols=95 Identities=11% Similarity=0.016 Sum_probs=68.5
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHH-HHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLS-WASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSN 393 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~-~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~ 393 (431)
.+++|+++.-.+.++---+......-++++..|+++.++...+. .+..++|..+.+.+.+...+..
T Consensus 310 ~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~------------- 376 (412)
T PF01306_consen 310 TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI------------- 376 (412)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-------------
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc-------------
Confidence 46778888889999888888899999999999999998888775 5777888888777777664211
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 014067 394 LNHYHLERFYWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 394 ~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
| ....|++++++.++..++=.+..++-+.
T Consensus 377 ---G-~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 377 ---G-FQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp ---H-HHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred ---C-cHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 1 1235788888877776666666555444
No 106
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.09 E-value=7.7e-05 Score=73.79 Aligned_cols=140 Identities=17% Similarity=0.155 Sum_probs=113.1
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.+++.+.-.+.+.+..|+...+..++-|| +-+...+.++.++-+.+++.
T Consensus 50 aG~lis~yAl~~ai~ap~l~~lt~r~~Rr-----------~lLl~~l~lFi~~n~l~alA-------------------- 98 (394)
T COG2814 50 AGQLITAYALGVALGAPLLALLTGRLERR-----------RLLLGLLALFIVSNLLSALA-------------------- 98 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchH-----------HHHHHHHHHHHHHHHHHHHh--------------------
Confidence 46788888999999999998876544333 22445566777777776665
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCC
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSN 393 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~ 393 (431)
-|++.++..-++.+++--...+...+.+.+++|++.|+..+|+.+...+++..+|..++.++.+.. +|=
T Consensus 99 -p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~------GWR---- 167 (394)
T COG2814 99 -PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF------GWR---- 167 (394)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh------hHH----
Confidence 467889999999999999999999999999999999999999999999999999999998886433 353
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014067 394 LNHYHLERFYWLMCILGGLNFLHFLFWAA 422 (431)
Q Consensus 394 ~n~~~l~~~f~~la~l~~v~~i~~~~~~~ 422 (431)
.-|+.++.++++..+..+...+
T Consensus 168 -------~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 168 -------ATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred -------HHHHHHHHHHHHHHHHHHHhCC
Confidence 4588888888888877777776
No 107
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.08 E-value=2e-05 Score=76.81 Aligned_cols=147 Identities=12% Similarity=0.141 Sum_probs=119.5
Q ss_pred CCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Q 014067 233 PPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEP 312 (431)
Q Consensus 233 p~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~ 312 (431)
..+++.+.-.++-++..|+.+.+..+...| .-|.+|++++..+-++.++.+
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~-----------ipm~~Gl~vmf~sTilFafg~------------------ 157 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYK-----------IPMVAGLFVMFLSTILFAFGN------------------ 157 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccc-----------cHHHHHHHHHHHHHHHHHHcc------------------
Confidence 345666666777777778887766543332 348899999999888888864
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchh-hhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcC
Q 014067 313 LPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSM-RSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFG 391 (431)
Q Consensus 313 ~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~-~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~ 391 (431)
|++.++.+..++|+|..+++..+++++.+.-|++. ||.+||+-.-..++|..+|+.+++++.+..++ -. |
T Consensus 158 ---sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk-----~a-P 228 (464)
T KOG3764|consen 158 ---SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGK-----SA-P 228 (464)
T ss_pred ---hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCC-----cC-c
Confidence 45578899999999999999999999999999977 59999999999999999999999998865431 11 2
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 014067 392 SNLNHYHLERFYWLMCILGGLNFLHFLFWAARYKYSS 428 (431)
Q Consensus 392 ~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~~~ 428 (431)
|+++++++++...+-+++.+.++.++
T Consensus 229 -----------FlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 229 -----------FLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred -----------HHHHHHHHHHHHHHHHheeCccccCc
Confidence 89999999999999999988877655
No 108
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.07 E-value=0.00013 Score=73.23 Aligned_cols=111 Identities=14% Similarity=0.059 Sum_probs=84.9
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.+...+..++..++.+++.++..+| +-+.++.++.+++.+..++.
T Consensus 53 g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----------~~~~~~~~~~~~~~~~~~~~--------------------- 100 (406)
T PRK11551 53 GWAFSAGILGLLPGALLGGRLADRIGRK-----------RILIVSVALFGLFSLATAQA--------------------- 100 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCc-----------hhHHHHHHHHHHHHHHHHHh---------------------
Confidence 4566777777777888887776544332 33556666666655544432
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.++++++...++.+++.....+...+.+.+..|++.|+..+|++.....+|..+++.+.....
T Consensus 101 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 163 (406)
T PRK11551 101 WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAA 163 (406)
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 356677788899999999999999999999999999999999999999999999988876553
No 109
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.07 E-value=0.00013 Score=60.56 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=79.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhH
Q 014067 238 PVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITF 317 (431)
Q Consensus 238 ~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~ 317 (431)
.....+..++..|+.+++.++..+ .+-+..+..+.+++....... .+.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~-----------~~~~~~~~~~~~~~~~~~~~~---------------------~~~ 51 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGR-----------KPVLLVGLFIFVLSTAMFALS---------------------SNI 51 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcch-----------hHHHHHHHHHHHHHHHHHHHh---------------------ccH
Confidence 344556666777777765543322 233555666666555544332 235
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 318 LWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 318 ~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
+++....++.+++.-...+.....+.+..|++.|+..+|+......+|..+++.+.+.+.
T Consensus 52 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (141)
T TIGR00880 52 TVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLA 111 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh
Confidence 566677889999998888999999999999999999999999999999999998887764
No 110
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.06 E-value=0.00011 Score=73.21 Aligned_cols=112 Identities=10% Similarity=0.040 Sum_probs=88.5
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.++..+.+.+..++..|+.+++.++.. ..+-+.++.++.+++.+.+++.
T Consensus 40 ~g~~~s~~~~~~~~~~~~~g~l~dr~g-----------~r~~~~~~~~~~~~~~~l~~~~-------------------- 88 (382)
T PRK10091 40 AGHMISYYALGVVVGAPIIALFSSRYS-----------LKHILLFLVALCVIGNAMFTLS-------------------- 88 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHccCc-----------cHHHHHHHHHHHHHHHHHHHHh--------------------
Confidence 356677888888888888887654332 2234667778777777766554
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.++++...++.|+++....+.....+.+..|++.|+..+|++.....+|..+++.+++.+.
T Consensus 89 -~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 89 -SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred -CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 356778888999999999988888889999999999999999999999999999988877664
No 111
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.06 E-value=5.4e-05 Score=73.76 Aligned_cols=134 Identities=16% Similarity=0.189 Sum_probs=99.9
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.+...+...+..|+.+++.++..+| +-+.++.++.+++.....+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----------~~l~~~~~~~~~~~~~~~~~--------------------- 82 (352)
T PF07690_consen 35 GLLFSAFFLGSALFSPFAGYLSDRFGRR-----------RVLIIGLLLFALGSLLLAFA--------------------- 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHS-HH-----------HHHHHHHHHHHHHHHHHHHH---------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCe-----------eeEeehhhhhhhHHHHhhhh---------------------
Confidence 4556667777778888888776544332 34667777777774444432
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNL 394 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~ 394 (431)
.+.++++...++.|+++....+....++.+..|++.|+..+|++....++|..+++.+++.+.+.. +|-
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------~~~----- 151 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF------GWR----- 151 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC------HHC-----
T ss_pred hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc------ccc-----
Confidence 134478889999999999999999999999999999999999999999999999999988775211 121
Q ss_pred CcchhhHHHHHHHHHHHHHHHHH
Q 014067 395 NHYHLERFYWLMCILGGLNFLHF 417 (431)
Q Consensus 395 n~~~l~~~f~~la~l~~v~~i~~ 417 (431)
..|++.+++.++..++.
T Consensus 152 ------~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 152 ------WAFLISAILSLIAAILF 168 (352)
T ss_dssp ------CHHHHHHHHHHHHHHHH
T ss_pred ------cccccccchhhhhhhhH
Confidence 24777777777776643
No 112
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.05 E-value=0.00016 Score=72.63 Aligned_cols=110 Identities=11% Similarity=0.023 Sum_probs=87.3
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcch
Q 014067 236 SLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPI 315 (431)
Q Consensus 236 ~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (431)
+..+...+...+..|+..++.++. ...+-+..++++.+++.+..++. .
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~Dr~-----------grr~~~~~~~~~~~~~~~~~~~~---------------------~ 106 (394)
T PRK10213 59 QSVTVTAFVAMFASLFITQTIQAT-----------DRRYVVILFAVLLTLSCLLVSFA---------------------N 106 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc-----------CcHHHHHHHHHHHHHHHHHHHHH---------------------C
Confidence 445667777777888887665433 22244677888887776665443 3
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
+.++++...++.|++.....|.....+.+..|++.|+..+|+.....++|..+++.+++.+.
T Consensus 107 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~ 168 (394)
T PRK10213 107 SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLG 168 (394)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57788888899999999999999999999999999999999999999999999999988775
No 113
>PRK10054 putative transporter; Provisional
Probab=98.04 E-value=0.00012 Score=73.57 Aligned_cols=112 Identities=12% Similarity=0.148 Sum_probs=83.7
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.++..++..+..++..|+.+++.++..+| +-+.+|.++.+++++..++.+
T Consensus 45 ~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-----------~~~~~~~~~~~~~~~~~~~~~------------------- 94 (395)
T PRK10054 45 IGYAMTIALTIGVVFSLGFGILADKFDKK-----------RYMLLAITAFASGFIAIPLVN------------------- 94 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcc-----------hhHHHHHHHHHHHHHHHHHHh-------------------
Confidence 35566677777788888888877654332 235677777777776665542
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
+.+.++..+.+.+.+.....+.....+.+..|++.|+..+|+.....++|..+++.+++.+.
T Consensus 95 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 95 --NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23344445667777777778888899999999999999999999999999999999988775
No 114
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.03 E-value=0.002 Score=66.26 Aligned_cols=84 Identities=10% Similarity=0.079 Sum_probs=63.8
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHH
Q 014067 324 YLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFY 403 (431)
Q Consensus 324 ~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f 403 (431)
-++.|+.---..+..=++..++.|++..+.+.|+|.++.-..+.+||++.+++...+++ .+ +-+
T Consensus 387 a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~--------------~r--~g~ 450 (477)
T PF11700_consen 387 AVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS--------------QR--YGF 450 (477)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------------ch--hHH
Confidence 34566666667788889999999999999999999999999999999999999866631 11 225
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 014067 404 WLMCILGGLNFLHFLFWAAR 423 (431)
Q Consensus 404 ~~la~l~~v~~i~~~~~~~~ 423 (431)
+.+.++.+++++++..+..+
T Consensus 451 ~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 451 LFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHHHHHHHHHHHHHhhccch
Confidence 56666667777766554433
No 115
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.03 E-value=0.0006 Score=69.53 Aligned_cols=83 Identities=6% Similarity=-0.083 Sum_probs=54.8
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcc-----c----------
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIE-----D---------- 66 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~-----~---------- 66 (431)
+++..++.++| |..-+.....+.++|+++ +|..+.+++....|+|..+++++++.+. .
T Consensus 131 lli~r~l~Gig-g~~f~~~~~~vs~wfp~~------~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~ 203 (462)
T PRK15034 131 FIVIALLCGFA-GANFASSMGNISFFFPKA------KQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQA 203 (462)
T ss_pred HHHHHHHHHHH-HHhHHHHHHHHHHHCCHh------HhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 45566778887 667788889999999754 3567888887788888877666665432 2
Q ss_pred ---ccCchhHHHHHHHHHHHHHHHHHhc
Q 014067 67 ---NKGWQWGFGISTATILLSIPIFLLG 91 (431)
Q Consensus 67 ---~~g~~~~F~i~~i~~~i~~iif~~~ 91 (431)
..+|+.++.+-.+..++..+++++.
T Consensus 204 ~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 204 DGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2345655555555555555555443
No 116
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.03 E-value=9e-05 Score=74.90 Aligned_cols=138 Identities=9% Similarity=0.066 Sum_probs=94.5
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcch
Q 014067 236 SLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPI 315 (431)
Q Consensus 236 ~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (431)
+..++..+...+.+|+.+.+.+++.|| +-+..|+++.+++.+..++. .
T Consensus 55 ~~~s~~~~~~~~~~~~~G~l~dr~Grr-----------~~l~~~~~~~~~~~~~~~~a---------------------~ 102 (413)
T PRK15403 55 ASVSLYLAGGMALQWLLGPLSDRIGRR-----------PVLITGALIFTLACAATLFT---------------------T 102 (413)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHcCch-----------HHHHHHHHHHHHHHHHHHHc---------------------C
Confidence 344455555566677766655444332 34566777776666555443 3
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCC
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLN 395 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n 395 (431)
++++++...+++|+++.+..+.....+.+.-|++.++..+|++.....+|..+|+.+++.+... .+|-
T Consensus 103 ~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~------~gw~------ 170 (413)
T PRK15403 103 SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF------VHWK------ 170 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCHH------
Confidence 5677888899999999887777778888888999999999999999999999999888766421 1232
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014067 396 HYHLERFYWLMCILGGLNFLHFLFWAA 422 (431)
Q Consensus 396 ~~~l~~~f~~la~l~~v~~i~~~~~~~ 422 (431)
..|+..+++.++..+...+..+
T Consensus 171 -----~~f~~~~~~~~i~~~~~~~~lp 192 (413)
T PRK15403 171 -----VLFAIIAVMGLIAFVGLLLAMP 192 (413)
T ss_pred -----HHHHHHHHHHHHHHHHHHHhCC
Confidence 3466667766666554443333
No 117
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.99 E-value=0.0001 Score=72.67 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=101.9
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.+++.+...+..++..|+.+++.++..+| +-+.++.++.+++....++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----------~~~~~~~~~~~~~~~~~~~~-------------------- 79 (399)
T TIGR00893 31 YGYVFSAFSWGYVVGQFPGGWLLDRFGAR-----------KTLAVFIVIWGVFTGLQAFA-------------------- 79 (399)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhcCcc-----------eeeHHHHHHHHHHHHHHHHH--------------------
Confidence 35667778888888888888876654433 12456666666666665553
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCC
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSN 393 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~ 393 (431)
.+.++++...++.|++.....+....++.+..|++.|+..+|++.....+|..+++.+.+.+... .+|-
T Consensus 80 -~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------~~~~---- 148 (399)
T TIGR00893 80 -GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH------FSWQ---- 148 (399)
T ss_pred -cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh------CCch----
Confidence 25667788899999999999999999999999999999999999999999999999888765321 1232
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014067 394 LNHYHLERFYWLMCILGGLNFLHFLFW 420 (431)
Q Consensus 394 ~n~~~l~~~f~~la~l~~v~~i~~~~~ 420 (431)
+.|+..+++.++..++..+.
T Consensus 149 -------~~~~~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 149 -------WAFIIEGVLGIIWGVLWLKF 168 (399)
T ss_pred -------HHHHHHHHHHHHHHHHhhhe
Confidence 45666666666665554443
No 118
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.99 E-value=0.00011 Score=71.87 Aligned_cols=116 Identities=16% Similarity=0.132 Sum_probs=88.8
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.++..+..++..|+.+++.++..|| +-+.++.++.+++....++.... ..
T Consensus 37 g~~~~~~~~~~~i~~~~~G~l~dr~g~r-----------~~~~~~~~~~~~~~~~~~~~~~~----------------~~ 89 (365)
T TIGR00900 37 SLAALAGMLPYVVLSPIAGALADRYDRK-----------KVMIGADLIRAVLVAVLPFVALL----------------GG 89 (365)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhchh-----------HHHHHHHHHHHHHHHHHHHHHHc----------------CC
Confidence 4566777777888888888876654433 23556666666665555554310 01
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.+++....++.+++..+..|...+++.+..|++.|+..+|+......+|..+++.+++.+.
T Consensus 90 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 90 LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 367778888999999999999999999999999999999999999999999999999887764
No 119
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.97 E-value=0.00029 Score=71.62 Aligned_cols=111 Identities=12% Similarity=-0.012 Sum_probs=83.9
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.+...+...+..|+.+++.+++.+| +-+.+++++.+++.+..++.
T Consensus 61 g~~~~~~~~~~~~~~~~~G~l~dr~g~r-----------~~~~~~~~~~~~~~~~~~~~--------------------- 108 (434)
T PRK11663 61 GLLATLFYITYGVSKFVSGIVSDRSNAR-----------YFMGIGLIATGIINILFGFS--------------------- 108 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhcCCc-----------hhHHHHHHHHHHHHHHHHHH---------------------
Confidence 4455666666777777777766444322 23667777777776665553
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+++.++...++.++++....+.....+.+..|++.||..+|++....++|..+++.+.+.+.
T Consensus 109 ~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 171 (434)
T PRK11663 109 SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIA 171 (434)
T ss_pred hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 244556666788899998888999999999999999999999999999999999998887764
No 120
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.97 E-value=0.00017 Score=71.85 Aligned_cols=112 Identities=16% Similarity=0.143 Sum_probs=88.2
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.+++.++..+...+..|+.+++.++..+| +-+.++.++.+++.+..++.
T Consensus 49 ~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----------~~~~~~~~~~~~~~~~~~~~-------------------- 97 (405)
T TIGR00891 49 AASLISAALISRWFGALMFGLWGDRYGRR-----------LPMVTSIVLFSAGTLACGFA-------------------- 97 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccH-----------HHHHHHHHHHHHHHHHHHHh--------------------
Confidence 34567777788888888888877655433 23556666666666555443
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+++++....++.|+++....+....++.+..|++.|+..+|++....++|..+++.+...+.
T Consensus 98 -~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 98 -PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred -ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 246667788899999999999999999999999999999999999999999999998887664
No 121
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.96 E-value=0.00026 Score=71.17 Aligned_cols=108 Identities=15% Similarity=0.031 Sum_probs=82.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhH
Q 014067 238 PVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITF 317 (431)
Q Consensus 238 ~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~ 317 (431)
.....+..++..|+.+++.++..+| +-+..|.++.+++++.+... .++
T Consensus 52 ~~~~~l~~~~~~~~~G~l~dr~g~k-----------~~l~~~~~~~~~~~~~~~~~---------------------~~~ 99 (400)
T PRK11646 52 LGLRQFIQQGLGIFGGAIADRFGAK-----------PMIVTGMLMRAAGFATMAIA---------------------HEP 99 (400)
T ss_pred HHHHHHHHHHHHhhhhHHHHHhCch-----------HHHHHHHHHHHHHHHHHHHh---------------------ccH
Confidence 3344444555566666665443222 33667778777777766543 256
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 318 LWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 318 ~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
|+++...++.++++....|...+.+.+.+|++.|+..+|+.....++|..+|+.+++.+.
T Consensus 100 ~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~ 159 (400)
T PRK11646 100 WLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL 159 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888899999998888999999999999999999999999999999999999988774
No 122
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.93 E-value=0.00023 Score=71.07 Aligned_cols=137 Identities=16% Similarity=0.063 Sum_probs=95.8
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcch
Q 014067 236 SLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPI 315 (431)
Q Consensus 236 ~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (431)
+..++..+..++..|+.+++.+++.|| +-+.+|.++.+++....... .
T Consensus 42 ~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----------~~l~~~~~~~~i~~~~~~~~---------------------~ 89 (392)
T PRK10473 42 IAFSVYLAGMAAAMLFAGKIADRSGRK-----------PVAIPGAALFIIASLLCSLA---------------------E 89 (392)
T ss_pred HHHHHHHHHHHHHHHhHhHHHHHhCCh-----------HHHHHHHHHHHHHHHHHHHh---------------------C
Confidence 445566666677788888877655332 23556776666666554443 2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCC
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLN 395 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n 395 (431)
+.++++...++++++..+..+.....+.+..|++.|+..+|++.....+|..+++.++..+... .+|-
T Consensus 90 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~------~g~~------ 157 (392)
T PRK10473 90 TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK------FPWQ------ 157 (392)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------cChH------
Confidence 4566777888999999998899999999999999999999999999999999998887765421 1232
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHh
Q 014067 396 HYHLERFYWLMCILGGLNFLHFLFWA 421 (431)
Q Consensus 396 ~~~l~~~f~~la~l~~v~~i~~~~~~ 421 (431)
..|++.++++++..++..+..
T Consensus 158 -----~~~~~~~~~~~i~~~~~~~~~ 178 (392)
T PRK10473 158 -----SLFYTMAAMGILVLLLSLFIL 178 (392)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHc
Confidence 345666666665555443333
No 123
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.90 E-value=0.00065 Score=67.95 Aligned_cols=137 Identities=14% Similarity=0.108 Sum_probs=92.8
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcch
Q 014067 236 SLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPI 315 (431)
Q Consensus 236 ~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (431)
+..++..+...+..|+.+++.++..+| +-+..+.++.+++....+.. .
T Consensus 58 ~~~~~~~~~~~~~~~~~g~l~dr~g~r-----------~~~~~~~~~~~~~~~~~~~~---------------------~ 105 (408)
T PRK09874 58 LVFSITFLFSAIASPFWGGLADRKGRK-----------IMLLRSALGMGIVMVLMGLA---------------------Q 105 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCcH-----------HHHHHHHHHHHHHHHHHHHH---------------------h
Confidence 445666677777888887776544322 23556666666665554442 3
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCC
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLN 395 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n 395 (431)
++++++...++.+++..+ .+.....+.+..|++.|+..+|++.....+|..+++.+.+.+.... +|-
T Consensus 106 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------~~~------ 172 (408)
T PRK09874 106 NIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY------GLR------ 172 (408)
T ss_pred hHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CHH------
Confidence 466777788888888765 4667788889999999999999999999999999998887764211 121
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014067 396 HYHLERFYWLMCILGGLNFLHFLFWAA 422 (431)
Q Consensus 396 ~~~l~~~f~~la~l~~v~~i~~~~~~~ 422 (431)
..|++.+++.++..+...+..+
T Consensus 173 -----~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 173 -----PVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhc
Confidence 3466666666666555444443
No 124
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.89 E-value=0.0025 Score=64.10 Aligned_cols=129 Identities=12% Similarity=0.119 Sum_probs=85.1
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCch
Q 014067 270 ITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLS 349 (431)
Q Consensus 270 ~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~ 349 (431)
.+..+-+.+|++..++=+...+..+ ++ .+..+..++...+++|+.-.+..+++..++.+.+|++
T Consensus 270 ~g~~~ll~~a~~~~~vR~~l~a~~~-------------~~---~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~ 333 (400)
T PF03825_consen 270 FGIKWLLLLALVAYAVRWLLYAYFS-------------DP---WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE 333 (400)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhc-------------CC---cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc
Confidence 3455556667666666555555441 00 1122222344456899999999999999999999999
Q ss_pred hhhHHHHHHHHH-HHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc
Q 014067 350 MRSLATSLSWAS-LAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYK 425 (431)
Q Consensus 350 ~~g~~~gl~~l~-~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~ 425 (431)
.|+..||++... .++|..+|..+++.+.+.-+ .+. --....+|.+.+++.++..+++++..|+-+
T Consensus 334 ~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g---------~~~--~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 334 LRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG---------ARG--MFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc---------chh--hhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 999999998765 58888888888877653221 110 001224567777788888888888766543
No 125
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.88 E-value=0.00011 Score=75.46 Aligned_cols=115 Identities=10% Similarity=-0.172 Sum_probs=84.6
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.+...+...+..|+.+++.+++. +.+-+.+++++.+++.+..+..-. + ..
T Consensus 67 g~~~s~~~~~~~~~~~~~G~l~Dr~g-----------~r~~l~~~~~~~~~~~~~~~~~~~---------~-------~~ 119 (467)
T PRK09556 67 GMIGLGFSITYGVGKTLVGYYADGKN-----------TKQFLPFLLILSAICMLGFGASLG---------S-------GS 119 (467)
T ss_pred HHHHHHHHHHHHHHHhhhhhHhhccC-----------ccchHHHHHHHHHHHHHHHHHHHh---------c-------cc
Confidence 44555556666677788777654332 224466777776666655554310 0 12
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
.+.+.++...++.|++|-...|.....+.+..|++.||.++|++....++|..+++.+....
T Consensus 120 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~ 181 (467)
T PRK09556 120 VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG 181 (467)
T ss_pred chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH
Confidence 35677888899999999999999999999999999999999999999999999998876544
No 126
>TIGR00895 2A0115 benzoate transport.
Probab=97.87 E-value=0.00016 Score=71.66 Aligned_cols=111 Identities=15% Similarity=0.087 Sum_probs=84.1
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.+...+..++..|+.+++.++..+| +-+.++.++.+++.+..++.
T Consensus 55 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----------~~~~~~~~~~~~~~~~~~~~--------------------- 102 (398)
T TIGR00895 55 GFLFSAGLIGMAFGALFFGPLADRIGRK-----------RVLLWSILLFSVFTLLCALA--------------------- 102 (398)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhhhH-----------HHHHHHHHHHHHHHHHHHHc---------------------
Confidence 3455566666667777777766554332 33556666666666555443
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.++++...++.+++.....+.....+.+..|++.|+..+|+......+|..+++.+.+.+.
T Consensus 103 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 165 (398)
T TIGR00895 103 TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLI 165 (398)
T ss_pred cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHh
Confidence 245567778899999999999999999999999999999999999999999999998887664
No 127
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.85 E-value=0.00026 Score=70.91 Aligned_cols=111 Identities=17% Similarity=0.074 Sum_probs=88.0
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.++..+.+.+...+.+|+.+++.++..+| +-+..|+++.+++.+..++.+
T Consensus 46 ~g~~~s~~~~~~~l~~~~~g~l~dr~G~r-----------~~l~~~~~l~~~~~~~~~~a~------------------- 95 (393)
T PRK09705 46 AALLTALPVVTMGGLALAGSWLHQHVSER-----------RSVAISLLLIAVGALMRELYP------------------- 95 (393)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhCch-----------HHHHHHHHHHHHHHHHHHHCc-------------------
Confidence 35566777778888888888877554443 447788898988888877752
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
++++++...++.|+++....+...+.+.+..| +.|+.++|++......|..+++.++..+.
T Consensus 96 --~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~ 156 (393)
T PRK09705 96 --QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLV 156 (393)
T ss_pred --chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778999999999999998899988887 77999999999988888888888877654
No 128
>PRK10504 putative transporter; Provisional
Probab=97.84 E-value=0.00057 Score=70.04 Aligned_cols=110 Identities=13% Similarity=0.048 Sum_probs=81.9
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcch
Q 014067 236 SLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPI 315 (431)
Q Consensus 236 ~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (431)
++.+...+...+..|+.+++.++..+| +-+..+.++.+++.+..++. .
T Consensus 49 ~~~~~~~~~~~~~~~~~g~l~d~~g~r-----------~~~~~~~~~~~~~~~~~~~~---------------------~ 96 (471)
T PRK10504 49 MVIVSYVLTVAVMLPASGWLADRVGVR-----------NIFFTAIVLFTLGSLFCALS---------------------G 96 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchH-----------HHHHHHHHHHHHHHHHHHHh---------------------C
Confidence 445555555667777777766554333 23445666666665554332 2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
+.++++...+++|++.....|.....+.+..|++.++..+|+......+|..+++.+++.+.
T Consensus 97 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 97 TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 45567778899999999999999999999999999999999999999999999999887765
No 129
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.83 E-value=7.9e-05 Score=73.19 Aligned_cols=139 Identities=14% Similarity=-0.006 Sum_probs=98.4
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.+...+...+..|+.+++.++..+| +-+.+|.++.+++.+..++.
T Consensus 33 g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----------~~~~~~~~~~~~~~~~~~~~--------------------- 80 (379)
T TIGR00881 33 GLLLSSFSIAYGISKFVMGSVSDRSNPR-----------VFLPIGLILCAIVNLFFGFS--------------------- 80 (379)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHhhCCe-----------ehhHHHHHHHHHHHHHHHHh---------------------
Confidence 4556677777777788887766544332 23667777777777766654
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhh-hhhhhhccccccCCCCCCCcCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFST-VLVSIVNNITSTYRHTPWLFGSN 393 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~-~l~~~~~~~~~~~~~~~w~~~~~ 393 (431)
.+.++++...++.++++.+..|.....+.+..|++.|+..+|++.....+|..+++ .+...+... .+|-
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~---- 150 (379)
T TIGR00881 81 TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL------YSWH---- 150 (379)
T ss_pred hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc------CCch----
Confidence 24567778889999999999999999999999999999999999999999999998 454443211 1232
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014067 394 LNHYHLERFYWLMCILGGLNFLHFLFWAA 422 (431)
Q Consensus 394 ~n~~~l~~~f~~la~l~~v~~i~~~~~~~ 422 (431)
..|++.++++++..++..+..+
T Consensus 151 -------~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T TIGR00881 151 -------WVFIVPGIIAIIVSLICFLLLR 172 (379)
T ss_pred -------hHHHHHHHHHHHHHHHHheeeC
Confidence 2366666666665555544433
No 130
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.82 E-value=0.004 Score=63.11 Aligned_cols=85 Identities=8% Similarity=0.024 Sum_probs=61.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccC------
Q 014067 274 QRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAP------ 347 (431)
Q Consensus 274 ~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP------ 347 (431)
+-+.+|.++.+++.+...+.. .-+.++.+...++.++|-....+.-++++.+...
T Consensus 303 ~~~~~~~~~~~i~~~~~~f~~-------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~T 363 (467)
T COG2211 303 KLFLIGLLLLAVGYLLLYFTP-------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKT 363 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHh
Confidence 447778888888877776652 2345566667788888888888888888877654
Q ss_pred -chhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 348 -LSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 348 -~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
++..|..-|...+..=+|..+++.+.+++-
T Consensus 364 G~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 364 GVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566788888888887777777776655543
No 131
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.82 E-value=0.00095 Score=67.01 Aligned_cols=135 Identities=13% Similarity=0.072 Sum_probs=90.1
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcch
Q 014067 236 SLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPI 315 (431)
Q Consensus 236 ~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (431)
+..+...+...+..|+.+.+.++..+| +-+.++.++.+++....+.. .
T Consensus 52 ~~~~~~~~~~~~~~~~~G~l~dr~g~r-----------~~l~~~~~~~~~~~~~~~~~---------------------~ 99 (406)
T PRK15402 52 TSMTAYLAGGMFLQWLLGPLSDRIGRR-----------PVMLAGVAFFILTCLAILLA---------------------Q 99 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCh-----------HHHHHHHHHHHHHHHHHHHH---------------------c
Confidence 344555556666667777665444322 23556666666665554443 2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCC
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLN 395 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n 395 (431)
+.++++...++.+++..+..+.....+.+..|++.++..+++......+|..+++.+++.+... .+|-
T Consensus 100 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~------~~w~------ 167 (406)
T PRK15402 100 SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV------LPWR------ 167 (406)
T ss_pred cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------cCcc------
Confidence 4556777788999999888888899999999999999999988887788888888887765421 1232
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHH
Q 014067 396 HYHLERFYWLMCILGGLNFLHFLF 419 (431)
Q Consensus 396 ~~~l~~~f~~la~l~~v~~i~~~~ 419 (431)
..|+..++++++..+....
T Consensus 168 -----~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK15402 168 -----GMFVLFAALAALSFFGLWR 186 (406)
T ss_pred -----HHHHHHHHHHHHHHHHHHH
Confidence 3356666666665554433
No 132
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.80 E-value=0.0012 Score=65.01 Aligned_cols=111 Identities=19% Similarity=0.169 Sum_probs=82.0
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.+++.+...+..++..|+.+++.++..+| +.+.++.++.+++.+..++..
T Consensus 39 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----------~~~~~~~~~~~i~~~~~~~~~------------------- 88 (366)
T TIGR00886 39 LGNLVAVPVLAGAVLRIILGFLVDKFGPR-----------YTTTLSLLLLAIPCLWAGLAV------------------- 88 (366)
T ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHhCch-----------HHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 45677788888888888888877554332 346678888888777766542
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
.++++++...++.+++.... +.....+.+..|++.|+..++++.....+|..+++.+...+
T Consensus 89 -~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 89 -QSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred -hhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 15666777888999987655 45678999999999999999999877777777666665443
No 133
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.80 E-value=0.0041 Score=60.37 Aligned_cols=81 Identities=23% Similarity=0.403 Sum_probs=66.8
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccccc-CchhHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNK-GWQWGFGISTAT 80 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~-g~~~~F~i~~i~ 80 (431)
++.+.+++++|.+..+.-.++++-+-|+++ .....+.|-.+.++|+.+++.++..+.++. ||+.+...=++.
T Consensus 102 L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~ 174 (395)
T COG2807 102 LFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALL 174 (395)
T ss_pred HHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHH
Confidence 577888899999999999999998888754 356788889999999999999999998887 799888777776
Q ss_pred HHHHHHHHH
Q 014067 81 ILLSIPIFL 89 (431)
Q Consensus 81 ~~i~~iif~ 89 (431)
-++++++.+
T Consensus 175 allAl~~Wl 183 (395)
T COG2807 175 ALLALLIWL 183 (395)
T ss_pred HHHHHHHHh
Confidence 666666443
No 134
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.78 E-value=0.0013 Score=65.54 Aligned_cols=112 Identities=12% Similarity=-0.016 Sum_probs=89.0
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.++..+...+...+..|+.+++.++..+| +-+.+|.++.+++....++.
T Consensus 43 ~G~~~s~~~l~~~~~~~~~g~l~dr~g~k-----------~~~~~~~~~~~~~~~~~~~~-------------------- 91 (381)
T PRK03633 43 VGVVSSSYFTGNLVGTLLAGYVIKRIGFN-----------RSYYLASLIFAAGCAGLGLM-------------------- 91 (381)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHh--------------------
Confidence 35667777777788888888877665544 34667788877777665553
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.|.++++...++.|++.....|.....+.+..|++.|+..+|.+.....+|..+|+.+.+.+.
T Consensus 92 -~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 92 -VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 256677788899999999988888888888999999999999999999999999999887764
No 135
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.77 E-value=0.00046 Score=69.98 Aligned_cols=110 Identities=15% Similarity=0.111 Sum_probs=85.4
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.++..+...+..|+.+++.+++.|| +-+.++.++.+++.+..++.. ..
T Consensus 74 ~~~~~~~~~~~~i~~~~~g~l~d~~grr-----------~~~~~~~~~~~~~~~~~~~~~------------------~~ 124 (481)
T TIGR00879 74 GLVVSIFLVGGFIGALFAGWLSDRFGRK-----------KSLLIIALLFVIGAILMGLAA------------------FA 124 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhHhhhhhhhH-----------HHHHHHHHHHHHHHHHHHHhc------------------cc
Confidence 4556666777778888888776555433 335667777777666655542 12
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhh
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLV 373 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~ 373 (431)
.+.++++...++.|+++....+....++.+..|++.|+..+|++.....+|..+++.+.
T Consensus 125 ~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 125 LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 34457778889999999999999999999999999999999999999999999999887
No 136
>PRK12382 putative transporter; Provisional
Probab=97.75 E-value=0.00081 Score=67.14 Aligned_cols=119 Identities=12% Similarity=0.064 Sum_probs=86.3
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+.+.+...+...+.+|+.+++.+++.+| +-+.+|.+..+++.+....... . +....
T Consensus 54 g~~~s~~~~~~~i~~~~~G~l~Dr~g~r-----------~~l~~~~~~~~~~~~~~~~~~~-----~--------~~~~~ 109 (392)
T PRK12382 54 GIAVGIQFLATVLTRGYAGRLADQYGAK-----------RSALQGMLACGLAGLAYLLAAI-----L--------PVSAP 109 (392)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHhhcch-----------HHHHHHHHHHHHHHHHHHhhhc-----c--------ccchh
Confidence 4567777788888899999887665443 2355566555544332222110 0 00012
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.++++...++.|+++....+...+.+.+..|++.|+..+|.+.....+|..+++.+++.+.
T Consensus 110 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~ 172 (392)
T PRK12382 110 FKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH 172 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 467778888999999999999999999999999999999999999988899999998887764
No 137
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.011 Score=60.50 Aligned_cols=84 Identities=19% Similarity=0.248 Sum_probs=62.0
Q ss_pred ChhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhh-h-hcccccCchhHHHHHH
Q 014067 1 MLFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFV-V-WIEDNKGWQWGFGIST 78 (431)
Q Consensus 1 ~~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~-~-~l~~~~g~~~~F~i~~ 78 (431)
++.+|..+.++..|.......-++.+.-|++ .|...=...-.++++|.+++..++ + .+..+-.|++.+..+.
T Consensus 118 ~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~------~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 118 MLILGRLIVGLACGLSTGLVPMYLTEISPKN------LRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPL 191 (485)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhhcChhh------hccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHH
Confidence 3678899999999999988888888776543 244444445678889999885554 2 4556667999999999
Q ss_pred HHHHHHHHHHHh
Q 014067 79 ATILLSIPIFLL 90 (431)
Q Consensus 79 i~~~i~~iif~~ 90 (431)
+..++.++...+
T Consensus 192 i~~~~~l~~l~~ 203 (485)
T KOG0569|consen 192 IPALLQLALLPF 203 (485)
T ss_pred HHHHHHHHHHhc
Confidence 888877665543
No 138
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.72 E-value=0.0006 Score=66.02 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=88.4
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..+...+..++..|+.+++.++..|| +-+.++.++.+++.......
T Consensus 37 ~~~~~~~~~~~~~~~~~~g~~~d~~g~r-----------~~~~~~~~~~~~~~~~~~~~--------------------- 84 (352)
T cd06174 37 GLIVSAFSLGYALGSLLAGYLSDRFGRR-----------RVLLLGLLLFALGSLLLAFA--------------------- 84 (352)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhCCc-----------hhhHHHHHHHHHHHHHHHHh---------------------
Confidence 4556677777778888888776554332 23667777777777665553
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.+++....++.+++..+..+....+..+..|++.|+..+|+.....++|..+++.+.+.+.
T Consensus 85 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 147 (352)
T cd06174 85 SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLA 147 (352)
T ss_pred ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 245677788999999999999999999999999999999999999999999999999887765
No 139
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.71 E-value=0.0014 Score=70.79 Aligned_cols=110 Identities=12% Similarity=0.047 Sum_probs=84.8
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.++..+..++..++.+++.+++.|| +-+.+++++.+++.++.++.
T Consensus 205 g~l~s~~~lG~iiG~li~G~LsDR~GRR-----------~~lii~lil~~i~~ll~afa--------------------- 252 (742)
T TIGR01299 205 GMLGLIVYLGMMVGAFFWGGLADKLGRK-----------QCLLICLSVNGFFAFFSSFV--------------------- 252 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHHH---------------------
Confidence 4566777777778888877776555443 33556666666655555443
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
.++++++...++.|++.....|....++.+.+|++.||..++++....++|..+++.++..+
T Consensus 253 ~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 253 QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24667788899999999999999999999999999999999999999999999988776554
No 140
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.70 E-value=0.00059 Score=67.51 Aligned_cols=139 Identities=14% Similarity=0.126 Sum_probs=97.0
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.++..+...+..|+.+++.++..| .+-+..|.++.+++.......+
T Consensus 29 ~~~~~~~~~~~~~~~~~~g~l~d~~g~-----------~~~~~~~~~~~~i~~~~~~~~~-------------------- 77 (377)
T PRK11102 29 QMTLSAYILGFAIGQLFYGPMADSFGR-----------KPVILGGTLVFALAAVACALAQ-------------------- 77 (377)
T ss_pred HHHHHHHHHHHHHHHHhhchHHhhcCC-----------hHHHHHHHHHHHHHHHHHHHHc--------------------
Confidence 344566666677777777766543322 2346677777777776665542
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNL 394 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~ 394 (431)
+.+.++...++.+++.....+...+.+.+..|++.|+..+|++.....+|..+++.+++.+.... +|
T Consensus 78 -~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------~~------ 144 (377)
T PRK11102 78 -TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF------SW------ 144 (377)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------Ch------
Confidence 34556677889999999888999999999999999999999999999999999998887664211 22
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014067 395 NHYHLERFYWLMCILGGLNFLHFLFWAA 422 (431)
Q Consensus 395 n~~~l~~~f~~la~l~~v~~i~~~~~~~ 422 (431)
...|+..++++++..++..+..+
T Consensus 145 -----~~~~~~~~~~~~~~~~~~~~~~~ 167 (377)
T PRK11102 145 -----HAIFWVLALAAILAAALVFFFIP 167 (377)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhCC
Confidence 13466666666666554444333
No 141
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.67 E-value=0.0019 Score=65.18 Aligned_cols=115 Identities=13% Similarity=0.031 Sum_probs=90.0
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.+++.+...+..++..|+..++.+++.+| +-+.+|+++.+++.+...... .
T Consensus 40 ~g~l~s~~~~g~~i~~~~~g~l~~r~G~r-----------~~~~~g~~l~~~g~~l~~~~~------------------~ 90 (410)
T TIGR00885 40 AALVQSAFYGGYFIMAIPAAIFMKKLSYK-----------AGILLGLFLYALGAFLFWPAA------------------E 90 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCch-----------HHHHHHHHHHHHHHHHHHHHH------------------h
Confidence 35677888888888888888766544332 447788888888876654332 0
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
..++++++...++.++|.-+..+....++.+.+|++.++..+++.....++|..+++.+...+.
T Consensus 91 ~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 91 IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1356677788899999999999999999999999999999999999999999999998887663
No 142
>PRK03699 putative transporter; Provisional
Probab=97.65 E-value=0.0019 Score=64.68 Aligned_cols=110 Identities=14% Similarity=0.057 Sum_probs=82.4
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..+...+...+..++.+++.+++.+| +-+..+.++.+++.+..++.
T Consensus 45 g~~~s~~~~~~~i~~~~~g~l~dr~g~r-----------~~~~~~~~~~~i~~~l~~~~--------------------- 92 (394)
T PRK03699 45 SNTFTFLNAGILISIFLNAWLMEIIPLK-----------RQLIFGFALMILAVAGLMFS--------------------- 92 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHH-----------HHHHHHHHHHHHHHHHHHHc---------------------
Confidence 3455666667777777777776655443 23556666666666655543
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
.+.++++...++.++++....+.....+.+..|++.|+..++......++|..+++.+.+.+
T Consensus 93 ~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 93 HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24566777889999999988888889999999999999999999888889988888877654
No 143
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.65 E-value=0.00049 Score=73.41 Aligned_cols=134 Identities=16% Similarity=0.052 Sum_probs=93.7
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHH--HHhhh-------h--
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIK--RKRVA-------V-- 302 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~--~~~~~-------~-- 302 (431)
.+++.+.+-+.-.+..++..++- .|. ...+-+++|+++.+++.+..++.+-. +|... +
T Consensus 70 ~G~i~s~~~i~~~~~~i~v~~~~----~r~-------~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 70 SGLINGSYEIGNLLLIIFVSYFG----TKL-------HRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred ceeeeehhhHHHHHHHHHHHHhh----ccc-------CcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 35677777777777777776643 332 33356889999999999888776421 11000 0
Q ss_pred --hcCC-C-C-------------CCCCc--chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHH
Q 014067 303 --NSGL-V-N-------------SSEPL--PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLA 363 (431)
Q Consensus 303 --~~g~-~-~-------------~~~~~--~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~ 363 (431)
+..+ . + ..+.. ...+..++..-+++|+|+....+.+..++.+..|++.|+.++|++.....
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 0000 0 0 00000 11344566788999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhcc
Q 014067 364 MGYYFSTVLVSIVNN 378 (431)
Q Consensus 364 iG~~l~~~l~~~~~~ 378 (431)
+|..+|..+++.+..
T Consensus 219 iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQ 233 (633)
T ss_pred hhhHHHHHHHHHHHh
Confidence 999999998887653
No 144
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.62 E-value=0.00064 Score=69.62 Aligned_cols=113 Identities=16% Similarity=0.077 Sum_probs=84.1
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+.+.+...+..++..++.+++.+++.+| +-+.+++++.+++.+...... .
T Consensus 79 g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----------~~l~~~~~~~~~~~~~~~~~~-------------------~ 128 (465)
T TIGR00894 79 GLILSSHFYGQIIIQIPVGYLAGKYVFK-----------WSIGIGMFLSSVISIVIPWAA-------------------G 128 (465)
T ss_pred hHHHHHHHHHHHHHHcchHHHHHHhCcc-----------hhhHHHHHHHHHHHHHHHHHH-------------------H
Confidence 3445555566667777777665544332 235566666666555443321 1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.++++...+++|++|....|.....+.+..|++.|+.++|++.....+|..+++.+.+.+.
T Consensus 129 ~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~ 191 (465)
T TIGR00894 129 GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLC 191 (465)
T ss_pred cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678888999999999999999999999999999999999999999999999999987765
No 145
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.62 E-value=0.00093 Score=68.88 Aligned_cols=142 Identities=11% Similarity=0.006 Sum_probs=98.6
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHH-HhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIP-FARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~p-l~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
+...+...+...+..++.+++-++ +.+| +-+.+|.++.+++.+.+++..
T Consensus 51 g~~~~~~~~~~~~~~~~~G~laDr~~G~~-----------~~l~~~~~~~~~g~~~~~~~~------------------- 100 (475)
T TIGR00924 51 FIIFGAYSALVYLLTSVGWWFGDRVWGTK-----------KTMVLGGIVLMLGHFMLAMSI------------------- 100 (475)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhcchH-----------HHHHHHHHHHHHHHHHHHhcc-------------------
Confidence 344555555666666666666554 3332 336778888888777665531
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCch---hhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLS---MRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLF 390 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~---~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~ 390 (431)
+.+++....++.++|+-+..|....++.++.|++ .|+...++++...++|..+|+.+++.+.... +|
T Consensus 101 --~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~------g~-- 170 (475)
T TIGR00924 101 --YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY------GY-- 170 (475)
T ss_pred --cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc------Ch--
Confidence 3445566778899999999999999999998875 4888999999999999999999988775211 22
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc
Q 014067 391 GSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYK 425 (431)
Q Consensus 391 ~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~ 425 (431)
..-|.+.++.++++.+++.+..++++
T Consensus 171 ---------~~~f~~~~~~~~~~~l~~~~~~~~~~ 196 (475)
T TIGR00924 171 ---------HVGFNLAAVGMVIGLLTFFAGRHMLR 196 (475)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHcccccc
Confidence 24466666666667777766666553
No 146
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.61 E-value=0.0066 Score=60.03 Aligned_cols=71 Identities=13% Similarity=0.119 Sum_probs=57.5
Q ss_pred cccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccC---chhHHHHHHHHHHHHHHHHHhcC
Q 014067 16 IKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKG---WQWGFGISTATILLSIPIFLLGS 92 (431)
Q Consensus 16 ~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g---~~~~F~i~~i~~~i~~iif~~~~ 92 (431)
.....-+.++..|++++ +..+..++= .-|+|..+...+++.+....| |+.+-.+..+.+++..+.++++.
T Consensus 121 sFav~m~~~s~~fP~~~------qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 121 SFAVGMPNASFFFPKEK------QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred eehcccccccccCChhh------hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555677888997663 456677666 889999999999999999899 99998899999999888887765
Q ss_pred c
Q 014067 93 P 93 (431)
Q Consensus 93 ~ 93 (431)
+
T Consensus 194 ~ 194 (417)
T COG2223 194 N 194 (417)
T ss_pred C
Confidence 4
No 147
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.60 E-value=0.0031 Score=63.53 Aligned_cols=111 Identities=14% Similarity=0.144 Sum_probs=86.9
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..+...+..++..|+.+++.++..+| +-+.++.++.+++.+..++.
T Consensus 56 ~~~~~~~~~~~~l~~~~~g~l~dr~g~r-----------~~l~~~~~~~~~~~~~~~~~--------------------- 103 (426)
T PRK12307 56 AFLATAAFIGRPFGGALFGLLADKFGRK-----------PLMMWSIVAYSVGTGLSGLA--------------------- 103 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCh-----------HHHHHHHHHHHHHHHHHHHH---------------------
Confidence 4556667777777888777766543322 34667788777777766654
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.++++...++.|+++....+....++.+..|++.|+..+|++....++|..+++.+...+.
T Consensus 104 ~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 104 SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 246677788899999999999999999999999999999999999999999999988776653
No 148
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.60 E-value=0.0011 Score=66.24 Aligned_cols=120 Identities=12% Similarity=0.040 Sum_probs=87.9
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.++..+...+...+..|+.+++.++..|| +-+..+.++.+++.+.+++.... . . ..
T Consensus 53 ~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r-----------~~l~~~~~~~~~~~~~~~~~~~~-----~--~------~~ 108 (399)
T PRK05122 53 AGLVISLQYLATLLSRPHAGRYADTLGPK-----------KAVVFGLCGCALSGLLYLLAGLL-----A--A------WP 108 (399)
T ss_pred HHHHHHHHHHHHHHhchhhHhHHhccCCc-----------chHHHHHHHHHHHHHHHHHhhhh-----h--c------cc
Confidence 35667777788888889988877655433 33566666666655444433210 0 0 01
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
..++++++...++.|+++....+.....+.+..|++.|+..+|+......+|..+|+.++..+.
T Consensus 109 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 172 (399)
T PRK05122 109 VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY 172 (399)
T ss_pred hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 2356678888899999999999999999999999999999999998888888888888877664
No 149
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.57 E-value=0.00096 Score=69.01 Aligned_cols=103 Identities=14% Similarity=0.084 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHH-HhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHH
Q 014067 244 FILILAPVYNHVIIP-FARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVAL 322 (431)
Q Consensus 244 ~iil~~pl~~~~~~p-l~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~ 322 (431)
...++.|+.+++-++ +.+| +-+.+|.++.+++.+.+++.. .....+..
T Consensus 62 ~~~~~~~~~G~laDr~~G~r-----------~~~~~g~~~~~~g~~~~~~~~--------------------~~~~ll~~ 110 (489)
T PRK10207 62 LVYGLISIGGYVGDHLLGTK-----------RTIVLGAIVLAIGYFMTGMSL--------------------LKPDLIFI 110 (489)
T ss_pred HHHHHHhhHHHhhhhccchH-----------HHHHHHHHHHHHHHHHHHHhc--------------------cchhHHHH
Confidence 344555566665544 3332 457888888888887776642 00111335
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccCch--hhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 323 QYLFLGSADLFTLAGMMEFFFTDAPLS--MRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 323 ~~~l~~igE~~~~~~~~~~~~~~aP~~--~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
..+++++|+-+..|....++.++-|++ .|+...+++++..++|..+|+.+++++.
T Consensus 111 ~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~ 167 (489)
T PRK10207 111 ALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIA 167 (489)
T ss_pred HHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999887 4577899999999999999999988875
No 150
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.56 E-value=0.0017 Score=64.60 Aligned_cols=90 Identities=12% Similarity=0.087 Sum_probs=69.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCC
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLN 395 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n 395 (431)
++++++...++.|+||-. .+.....+.+..|++.|++++|++.....+|..+++.++..+... .+|=
T Consensus 78 ~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~------~gWr------ 144 (368)
T TIGR00903 78 NYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA------GGLQ------ 144 (368)
T ss_pred cHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------cchH------
Confidence 678899999999999986 455566678899999999999999999999999999988887531 2453
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhc
Q 014067 396 HYHLERFYWLMCILGGLNFLHFLFWAAR 423 (431)
Q Consensus 396 ~~~l~~~f~~la~l~~v~~i~~~~~~~~ 423 (431)
..|...++++++..++..+..++
T Consensus 145 -----~~f~~~~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 145 -----LLIIPIAAVAAAGIILVLAALPA 167 (368)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHcCC
Confidence 45666777777766655555443
No 151
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.55 E-value=0.0013 Score=64.42 Aligned_cols=137 Identities=17% Similarity=0.109 Sum_probs=94.1
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..+...+...+..|+.+++.++..|| +-+.+|.++.+++....++.+
T Consensus 41 g~~~s~~~~~~~~~~~~~G~l~d~~G~r-----------~~~~~~~~~~~~~~~~~~~~~-------------------- 89 (377)
T TIGR00890 41 AIWFTLLLIGLAMSMPVGGLLADKFGPR-----------AVAMLGGILYGLGFTFYAIAD-------------------- 89 (377)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHcCcc-----------chhHHhHHHHHHHHHHHHHHH--------------------
Confidence 5566777777888888888877655443 235667777777776666542
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNL 394 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~ 394 (431)
+.+.+....++.++++....+.....+.+..|+ .|+.++|++....++|..+++.+...+... .+|
T Consensus 90 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~------ 155 (377)
T TIGR00890 90 -SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-KRGLASGIIIGGYGLGSFILSPLITSVINL------EGV------ 155 (377)
T ss_pred -HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-ccHHHHHHHHHhcchhHhHHHHHHHHHHhc------ccH------
Confidence 455666777899999988887877888777775 699999999999999988766555443210 122
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHh
Q 014067 395 NHYHLERFYWLMCILGGLNFLHFLFWA 421 (431)
Q Consensus 395 n~~~l~~~f~~la~l~~v~~i~~~~~~ 421 (431)
...|+..++++++..+..++..
T Consensus 156 -----~~~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 156 -----PAAFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHhe
Confidence 2446666776666655544443
No 152
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.54 E-value=0.0033 Score=62.73 Aligned_cols=111 Identities=10% Similarity=-0.017 Sum_probs=80.9
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..+...+..++..|+.+.+.+++.|| +-+.++.++.+++.+.....
T Consensus 46 ~~~~~~~~~~~~~~~~~~G~l~Dr~grr-----------~~~~~~~~~~~~~~~~~~~~--------------------- 93 (394)
T PRK11652 46 QAVMAAYLLTYGLSQLFYGPLSDRVGRR-----------PVILVGMSIFILGTLVALFA--------------------- 93 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHhcCCh-----------HHHHHHHHHHHHHHHHHHHH---------------------
Confidence 3445666666777777777766544322 23556666666666554432
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.++++...++.+++.....+...++..+..|++.++..++.+.+...+|..+++.+.+.+.
T Consensus 94 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 156 (394)
T PRK11652 94 HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLT 156 (394)
T ss_pred ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 245667778889999888888888888989999999999999999999999999988887764
No 153
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.53 E-value=0.025 Score=57.54 Aligned_cols=81 Identities=10% Similarity=0.025 Sum_probs=62.9
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHH---HHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFG---IST 78 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~---i~~ 78 (431)
+.+..++.|+++|..- +....+..+++++ +|.++.+++..+.++|.++++++++++ .++||+.-+. ++.
T Consensus 118 L~i~R~llGvaEA~~~-A~~syI~~WfP~k------ER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl 189 (511)
T TIGR00806 118 MQLMEVFYSVTMAARI-AYSSYIFSLVPPS------RYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISL 189 (511)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHH
Confidence 4567889999999999 9999999999744 367788999999999999999999995 4678885443 445
Q ss_pred HHHHHHHHHHHh
Q 014067 79 ATILLSIPIFLL 90 (431)
Q Consensus 79 i~~~i~~iif~~ 90 (431)
..+.+++++-++
T Consensus 190 ~s~~~a~~~a~~ 201 (511)
T TIGR00806 190 VFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHHHh
Confidence 555555544333
No 154
>TIGR00898 2A0119 cation transport protein.
Probab=97.50 E-value=0.00097 Score=69.01 Aligned_cols=132 Identities=13% Similarity=0.096 Sum_probs=97.1
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++.+++..+..++..++.+++.+++.|| +-+.++.++.+++.+..++.
T Consensus 130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Grr-----------~~~~~~~~~~~i~~~~~~~~--------------------- 177 (505)
T TIGR00898 130 DLTQSCFFVGVLLGSFVFGYLSDRFGRK-----------KVLLLSTLVTAVSGVLTAFS--------------------- 177 (505)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccch-----------HHHHHHHHHHHHHHHHHHHc---------------------
Confidence 4567777778888888888776554433 22555666666655554443
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNL 394 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~ 394 (431)
.++++++...++.|++.....+....++.+..|++.|+..++++....++|..+++.+..++. +|-
T Consensus 178 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---------~wr----- 243 (505)
T TIGR00898 178 PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---------DWR----- 243 (505)
T ss_pred ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---------HHH-----
Confidence 356778888999999999999999999999999999999999999999999999888876553 242
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHH
Q 014067 395 NHYHLERFYWLMCILGGLNFLHFL 418 (431)
Q Consensus 395 n~~~l~~~f~~la~l~~v~~i~~~ 418 (431)
..|+..++.+++..+.++
T Consensus 244 ------~~~~~~~i~~~~~~~~~~ 261 (505)
T TIGR00898 244 ------WLQLAVSLPTFLFFLLSW 261 (505)
T ss_pred ------HHHHHHHHHHHHHHHHHH
Confidence 446666666665555543
No 155
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.47 E-value=0.0054 Score=63.19 Aligned_cols=111 Identities=14% Similarity=0.135 Sum_probs=84.4
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.+...+..++..|+.+++.++..+| +-+.++.++.+++.+.+++.
T Consensus 58 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----------~~~~~~~~~~~~~~~~~~~~--------------------- 105 (496)
T PRK03893 58 ASLISAAFISRWFGGLLLGAMGDRYGRR-----------LAMVISIVLFSVGTLACGFA--------------------- 105 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHHH---------------------
Confidence 3455555566666677777665544322 23556777777776665553
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.++++...++.|++.....+....++.+..|++.|+..+|++....++|+.+++.+...+.
T Consensus 106 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 106 PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 256677888899999999999999999999999999999999999999999999998887764
No 156
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.46 E-value=0.001 Score=67.62 Aligned_cols=85 Identities=20% Similarity=0.087 Sum_probs=64.7
Q ss_pred HHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHH
Q 014067 4 AGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILL 83 (431)
Q Consensus 4 ~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i 83 (431)
+.+.+..+|.....-...+++.+.-+++. ++ +...-++.|.+.++|++++..+.|++.++.+++..|.+.++.-.+
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p-~~---~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l 166 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREP-ES---RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLL 166 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCC-ch---hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHH
Confidence 44566778888888888888888776553 22 344566779999999999999999999999999999998877776
Q ss_pred HHHHHHhcC
Q 014067 84 SIPIFLLGS 92 (431)
Q Consensus 84 ~~iif~~~~ 92 (431)
..+..++..
T Consensus 167 ~~~~~~~~~ 175 (433)
T PF03092_consen 167 MLIVALFLL 175 (433)
T ss_pred HHHHHHHhh
Confidence 655444433
No 157
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.45 E-value=0.004 Score=63.63 Aligned_cols=107 Identities=11% Similarity=-0.083 Sum_probs=75.5
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcch
Q 014067 236 SLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPI 315 (431)
Q Consensus 236 ~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (431)
+..+...+...+..|+.+++.++..+| +-+.+|.++.+++.+..++... ...
T Consensus 67 ~~~~~~~i~~~~~~~~~G~l~Dr~g~k-----------~~l~~~~~~~~i~~~~~~~~~~-----------------~~~ 118 (452)
T PRK11273 67 FALSGISIAYGFSKFIMGSVSDRSNPR-----------VFLPAGLILAAAVMLFMGFVPW-----------------ATS 118 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhccCCc-----------hhHHHHHHHHHHHHHHHHhhhc-----------------ccc
Confidence 345555666667777777765444322 3366777777777776665420 012
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhh
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFST 370 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~ 370 (431)
++++++...++.++++....|.....+.+..|++.|+..+|+++....+|..+.+
T Consensus 119 ~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 173 (452)
T PRK11273 119 SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPP 173 (452)
T ss_pred cHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHH
Confidence 4556677788999999888887778888999999999999999998888875433
No 158
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.45 E-value=0.0061 Score=62.46 Aligned_cols=122 Identities=11% Similarity=0.004 Sum_probs=85.1
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcch
Q 014067 236 SLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPI 315 (431)
Q Consensus 236 ~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (431)
+..+...+..++.+++.+++.+++.|| +-+.++.++.+++.+..++.+...... ......
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr-----------~~~~~~~~l~~i~~~~~~~~~~~~~~~---------~~~~~~ 118 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRR-----------DSLKIAAVLFFISALGSAWPEFGFTSI---------GPDNTG 118 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccH-----------HHHHHHHHHHHHHHHHHHhhccccccc---------cccchh
Confidence 445566666777778877776655444 336667777766666555432100000 000122
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+++++...++.|++.-...|....++.+..|++.||.++|++.....+|..+++.+.....
T Consensus 119 ~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 180 (479)
T PRK10077 119 YVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIA 180 (479)
T ss_pred HHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34567788899999999999999999999999999999999999999999998877665443
No 159
>PRK11043 putative transporter; Provisional
Probab=97.44 E-value=0.0051 Score=61.57 Aligned_cols=111 Identities=8% Similarity=-0.044 Sum_probs=79.5
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..++..+...+..|+.+++.++..+| +-+..+.++.+++.+..++.
T Consensus 44 g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----------~~~~~~~~~~~~~~~~~~~~--------------------- 91 (401)
T PRK11043 44 SASLSLFLAGFALGQLLWGPLSDRYGRK-----------PVLLAGLSLFALGSLGMLWV--------------------- 91 (401)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHhhcCCc-----------HHHHHHHHHHHHHHHHHHHh---------------------
Confidence 4455666666667777777665443322 33556666666666555443
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.++++...++.+++.....+...+.+.+..|++.++...+......++|..+++.+++.+.
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 154 (401)
T PRK11043 92 ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLL 154 (401)
T ss_pred cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 245667777889999887777888889999999999998888888888888888888877664
No 160
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.44 E-value=0.0032 Score=64.08 Aligned_cols=144 Identities=13% Similarity=-0.013 Sum_probs=93.9
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..++..+...+..++.+++.+++.+| +-+.+|.++.+++.+.++.... ..
T Consensus 64 g~~~~~~~~~~~~~~~~~G~l~dr~g~~-----------~~~~~~~~~~~~~~~~~~~~~~-----------------~~ 115 (438)
T TIGR00712 64 GFALSAISIAYGFSKFIMGSVSDRSNPR-----------VFLPAGLILSAAVMLLMGFVPW-----------------AT 115 (438)
T ss_pred HHHHHHHHHHHHHhhhccchhhhccCCc-----------eehHHHHHHHHHHHHHHhcccc-----------------cc
Confidence 4455566666667777777765433222 2355677777776665544310 01
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNL 394 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~ 394 (431)
.+.+.+....++.++++....+...+.+.+..|++.||..+|+++...++|..+++.+........ .+|-
T Consensus 116 ~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----~~w~----- 185 (438)
T TIGR00712 116 SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF-----NDWH----- 185 (438)
T ss_pred chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh-----hhhH-----
Confidence 244455667888999998888888899999999999999999999999999998887765432111 1232
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014067 395 NHYHLERFYWLMCILGGLNFLHFLFWAA 422 (431)
Q Consensus 395 n~~~l~~~f~~la~l~~v~~i~~~~~~~ 422 (431)
..|++.++++++..++..+..|
T Consensus 186 ------~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 186 ------AALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred ------HHHHHHHHHHHHHHHHHHHhcc
Confidence 3466667776666554444443
No 161
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.41 E-value=0.0019 Score=64.77 Aligned_cols=108 Identities=15% Similarity=0.079 Sum_probs=82.9
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.+...+...++.|+.+++.+++.|| +-+.++.++.+++.+.+++..
T Consensus 41 ~~~~~~~~l~~~l~~~~~G~laDr~grr-----------~vl~~~~~~~~~~~~~~~~~~-------------------- 89 (393)
T PRK11195 41 PLLQMFFVLAYIVLAPFVGAFADSFPKG-----------RVMFIANGIKLLGCLLMLFGI-------------------- 89 (393)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhccCCc-----------hhhHHHHHHHHHHHHHHHHHH--------------------
Confidence 5666777788888899998876554433 235566666655544433321
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
+. +...+++|+++.+..|...+.+.+..|++.|+.++|++.....+|..+|+.+++++.
T Consensus 90 -~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 90 -HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred -HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 345688999999999999999999999999999999999999999999999988874
No 162
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.41 E-value=0.013 Score=59.58 Aligned_cols=100 Identities=14% Similarity=0.097 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHH
Q 014067 244 FILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQ 323 (431)
Q Consensus 244 ~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~ 323 (431)
.-.++..+.+++.+++ .+.+-+.++++.-++..+..++. .|++.+...
T Consensus 74 sYal~qIp~GlLaDrl-----------G~K~vL~l~~l~Wsl~t~L~~fa---------------------~Sl~~L~i~ 121 (511)
T TIGR00806 74 SHLAVLVPVFLLTDYL-----------RYKPVLVLQALSFVCVWLLLLLG---------------------TSVWHMQLM 121 (511)
T ss_pred HHHHHHHHHHHHHHHh-----------CchHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHH
Confidence 3445555555554433 23344667777666666666664 357788899
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 324 YLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 324 ~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
.++.|++|.... +...++++..|++.|++++|++.....+|..+++.+++++
T Consensus 122 R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 122 EVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999884
No 163
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.40 E-value=0.038 Score=58.08 Aligned_cols=82 Identities=16% Similarity=0.210 Sum_probs=51.4
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+..|.++.++|.|... .....++|..+.+ .|..++.+..+..=+...+++.++..+..+-+|++.|++.++..
T Consensus 134 ~iag~~l~GvgaG~~~-~~~~~isEl~p~k------~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~ 206 (599)
T PF06609_consen 134 FIAGMVLYGVGAGVQE-LAALAISELVPNK------WRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWS 206 (599)
T ss_pred HHHHHHHHHHhhHHHH-HHHHHHHHhcccc------hhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHH
Confidence 4578889999977765 4455678888543 23223333333222223345555555555679999999999988
Q ss_pred HHHHHHHHh
Q 014067 82 LLSIPIFLL 90 (431)
Q Consensus 82 ~i~~iif~~ 90 (431)
.++++...+
T Consensus 207 ~i~~vl~~~ 215 (599)
T PF06609_consen 207 GIALVLIFF 215 (599)
T ss_pred HHHHHHHHH
Confidence 888765444
No 164
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.40 E-value=0.031 Score=55.22 Aligned_cols=59 Identities=17% Similarity=0.160 Sum_probs=48.0
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccc
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIED 66 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~ 66 (431)
|..++.+++.|.|..+...++++++.-+++... +| .|.--....+|++++|.+++++..
T Consensus 107 FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~---~r---lnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 107 FLVALFILASGIGLLETAANPYVTLLGKPESAA---FR---LNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHhhhHHHHhccchHHHHhCCchhHH---HH---HHHHHHhhhhHHHHHHHHHHHHHH
Confidence 677889999999999999999999998865322 22 455566678999999999998866
No 165
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.38 E-value=0.0073 Score=59.32 Aligned_cols=84 Identities=6% Similarity=0.010 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHH
Q 014067 276 IGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLAT 355 (431)
Q Consensus 276 i~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~ 355 (431)
+..+.++.+++++.+++.. ...+.+++...+++.++.-.+..|...+++.+..|++.|+...
T Consensus 60 l~~~~~~~~~~~~~l~~~~------------------~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~ 121 (356)
T TIGR00901 60 LVLTQVLLLSLLLILSFLV------------------PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGS 121 (356)
T ss_pred HHHHHHHHHHHHHHHHcCC------------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHH
Confidence 3456666666655554432 1235666777777888888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhc
Q 014067 356 SLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 356 gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
|+.....++|..+++.++..+.
T Consensus 122 ~~~~~~~~~G~~~~~~l~~~l~ 143 (356)
T TIGR00901 122 TIYIVGYRAGMLLSGSLALVLA 143 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998887665
No 166
>PRK10489 enterobactin exporter EntS; Provisional
Probab=97.38 E-value=0.0019 Score=65.03 Aligned_cols=117 Identities=13% Similarity=-0.032 Sum_probs=85.6
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.+++.+...+..++..|+.+++.+++.+| +-+.++.++.++++...+.... . .
T Consensus 54 ~g~~~~~~~l~~~~~~~~~G~l~dr~g~~-----------~~l~~~~~~~~~~~~~~~~~~~-----~-----------~ 106 (417)
T PRK10489 54 VGLSVTLTGGAMFIGLMVGGVLADRYDRK-----------KLILLARGTCGLGFIGLALNAF-----L-----------P 106 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhcCCc-----------eEEEehHHHHHHHHHHHHHHHH-----c-----------C
Confidence 35667777778888888888776554333 2244566666666655443210 0 0
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
..+++++....++.+++..+..+...+.+.+..|++.++..+|++....++|..+|+.+++.+.
T Consensus 107 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~ 170 (417)
T PRK10489 107 EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLI 170 (417)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHH
Confidence 1345667777888999998888999999999999999999999999999999999998887764
No 167
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.36 E-value=0.0031 Score=64.57 Aligned_cols=136 Identities=13% Similarity=0.076 Sum_probs=87.2
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..+...+...+..|+.+++.+++.+| +-+..++++.+++.+.+++..
T Consensus 57 ~~~~s~~~~~~~~~~~~~G~l~dr~g~r-----------~~l~~~~~~~~~~~~~~~~~~-------------------- 105 (455)
T TIGR00892 57 AWISSIMLAVLYAGGPISSILVNRFGCR-----------PVVIAGGLLASLGMILASFSS-------------------- 105 (455)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHcCch-----------HHHHhhHHHHHHHHHHHHHhh--------------------
Confidence 4445555555566777777665443222 345667777776666655542
Q ss_pred hhHHHHHH-HHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCC
Q 014067 315 ITFLWVAL-QYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSN 393 (431)
Q Consensus 315 ~s~~wli~-~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~ 393 (431)
+.+.+.. ..++.|+++....+.....+.+..| +.|+..+|++.....+|..+++.+.+.+.... +|-
T Consensus 106 -~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~------gwr---- 173 (455)
T TIGR00892 106 -NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF------GWR---- 173 (455)
T ss_pred -hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh------ChH----
Confidence 2333332 3467788888766666677777766 78999999999999999999988877664211 232
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHH
Q 014067 394 LNHYHLERFYWLMCILGGLNFLHFLFW 420 (431)
Q Consensus 394 ~n~~~l~~~f~~la~l~~v~~i~~~~~ 420 (431)
..|++.++++++..+..+++
T Consensus 174 -------~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 174 -------GSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred -------HHHHHHHHHHHHHHHHHHHh
Confidence 45777777777665554444
No 168
>PTZ00207 hypothetical protein; Provisional
Probab=97.34 E-value=0.0089 Score=62.87 Aligned_cols=119 Identities=6% Similarity=0.023 Sum_probs=86.1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhh
Q 014067 272 HLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMR 351 (431)
Q Consensus 272 ~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~ 351 (431)
+.+-+.+|.++.+++.+..++... + ....+++.+....++.|+|+....+.....+.+..| +.|
T Consensus 90 ~R~vllig~ll~~iG~ll~ala~~---------~------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~R 153 (591)
T PTZ00207 90 PRPIFVLSMTVFCLGTLLFALTFQ---------E------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNR 153 (591)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhc---------c------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhh
Confidence 334577899999999888777521 0 012467777888999999999988888888888887 678
Q ss_pred hHHHHHHHHHHHHHHHHhh-hhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc
Q 014067 352 SLATSLSWASLAMGYYFST-VLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYK 425 (431)
Q Consensus 352 g~~~gl~~l~~~iG~~l~~-~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~ 425 (431)
|.++|++....++|+.+.+ +...++. + +...+|++++++.++..++.....|..+
T Consensus 154 G~a~Gi~~~~~gLGsaI~~~l~~~l~~--------------~-----~~~~~fl~l~vl~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 154 GAVVAIMKTFTGLGSAILGSIQLAFFS--------------D-----NTSAYFFFLMSFALVVGILAIVFMRLPP 209 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--------------H-----hHHHHHHHHHHHHHHHHHHHHhheeCCc
Confidence 9999999999999997644 4444432 1 1235677788888777777666665554
No 169
>PRK11010 ampG muropeptide transporter; Validated
Probab=97.34 E-value=0.013 Score=60.68 Aligned_cols=132 Identities=17% Similarity=0.202 Sum_probs=90.8
Q ss_pred HHHHHHHHHhhhccCCCCCCCchhh-hHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHh
Q 014067 251 VYNHVIIPFARKVTKTEMGITHLQR-IGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGS 329 (431)
Q Consensus 251 l~~~~~~pl~~~~~~~~~~~s~~~k-i~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~i 329 (431)
+...+|-|+.+|.+... ....++ +.++.++.+++...+++.+ ...+.+|+....++.++
T Consensus 60 ~~~~l~gpl~Dr~~~~~--~Grrr~~ll~~~i~~~~~~~~~a~~~------------------~~~~l~~l~~~~~l~~~ 119 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPF--LGRRRGWLLATQLLLLVAIAAMGFLE------------------PGTQLRWLAALAVVIAF 119 (491)
T ss_pred HHHHHHHHHHHcccccC--CCCchHHHHHHHHHHHHHHHHHHHcC------------------CcchHHHHHHHHHHHHH
Confidence 56666777777742110 111122 5566676767766665542 12457788888889998
Q ss_pred hhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHH
Q 014067 330 ADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCIL 409 (431)
Q Consensus 330 gE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l 409 (431)
+-....+...+++.+..|++.|+..+|+......+|..+++.+...+.... .+|- ..|++.+++
T Consensus 120 ~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~-----~GWr-----------~~f~i~a~l 183 (491)
T PRK11010 120 CSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRY-----LGWQ-----------GMYWLMAAL 183 (491)
T ss_pred HHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCHH-----------HHHHHHHHH
Confidence 888888999999999999999999999999999999999988877664210 1343 346667776
Q ss_pred HHHHHHHHH
Q 014067 410 GGLNFLHFL 418 (431)
Q Consensus 410 ~~v~~i~~~ 418 (431)
+++..+..+
T Consensus 184 ~ll~~l~~~ 192 (491)
T PRK11010 184 LIPCIIATL 192 (491)
T ss_pred HHHHHHHHH
Confidence 666654433
No 170
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.32 E-value=0.0048 Score=64.03 Aligned_cols=116 Identities=16% Similarity=0.104 Sum_probs=79.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchh--h
Q 014067 274 QRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSM--R 351 (431)
Q Consensus 274 ~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~--~ 351 (431)
+-+.+|.++.+++...+++.. .+.+++....+++++|.-+..|....++.++-|++. +
T Consensus 89 ~~~~~g~~~~~ig~~l~~~~~--------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~ 148 (500)
T PRK09584 89 RVIMLGAIVLAIGYALVAWSG--------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRL 148 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhh
Confidence 346678887777766655431 123345566788899999888888899999887643 4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 014067 352 SLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 352 g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
+..+++++...++|..+++.+.+.+.+.. +| .+-|.+.++..+++.+.+++..++++.
T Consensus 149 ~~~~~~~~~~~~iG~~~gp~i~g~l~~~~------g~-----------~~~F~i~~i~~~i~~i~~~~~~~~~~~ 206 (500)
T PRK09584 149 DGAFTMYYMSINIGSFFSMLATPWLAAKY------GW-----------SVAFALSVVGMLITVVNFAFCQRWVKQ 206 (500)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHhh------CH-----------HHHHHHHHHHHHHHHHHHHHhHHHhcc
Confidence 45788889999999999999988775211 22 234666666666666667666655543
No 171
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.30 E-value=0.01 Score=60.44 Aligned_cols=151 Identities=13% Similarity=0.109 Sum_probs=98.8
Q ss_pred CCcccCCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 014067 228 GSLKVPPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLV 307 (431)
Q Consensus 228 gg~~ip~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~ 307 (431)
++.++-.+...+.+-..=|++-++..+++ +|. ...+-|.+|+...++=++....++
T Consensus 402 ~~~~~LfGv~~a~~~~gEI~~~ffs~klI----~ki-------GHv~v~~lgLa~~~~Rf~~~S~L~------------- 457 (618)
T KOG3762|consen 402 GGIKTLFGVVSALCHAGEILFYFFSFKLI----EKI-------GHVNVMYLGLACNVGRFLYYSYLQ------------- 457 (618)
T ss_pred CCcceeeeehhhhhccchHHHHHHHHHHH----HHh-------cccceeeehhhHHHHHHHHHHHhc-------------
Confidence 33333344445555555555555555544 443 223446677766666555554442
Q ss_pred CCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHH-HHHHHHhhhhhhhhccccccCCCC
Q 014067 308 NSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASL-AMGYYFSTVLVSIVNNITSTYRHT 386 (431)
Q Consensus 308 ~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~-~iG~~l~~~l~~~~~~~~~~~~~~ 386 (431)
|+|..+|.-+++++.-.+++.+..+++...||++++..++|+.-... ++|.-+|+++++.+....
T Consensus 458 --------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f------ 523 (618)
T KOG3762|consen 458 --------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF------ 523 (618)
T ss_pred --------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee------
Confidence 55667788899999999999999999999999999999999887654 666667766666654211
Q ss_pred CCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 014067 387 PWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYKYS 427 (431)
Q Consensus 387 ~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~~ 427 (431)
| .-.+|...++-+++.++++..+-+..++|
T Consensus 524 -g----------~~ttf~~~giAcl~~l~~~~~iq~~l~~~ 553 (618)
T KOG3762|consen 524 -G----------ARTTFRIFGIACLVTLALFISIQLLLKRR 553 (618)
T ss_pred -h----------hHHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 1 12356777777777777766666555543
No 172
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.30 E-value=0.0005 Score=56.95 Aligned_cols=82 Identities=13% Similarity=0.156 Sum_probs=68.1
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATIL 82 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~ 82 (431)
++...+.+++.+...+...+...|.++++ +|....++.+.+.++|..+++.+.+++.+..+|+..|.+.++..+
T Consensus 55 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (141)
T TIGR00880 55 IIARFLQGFGAAFALVAGAALIADIYPPE------ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILAL 128 (141)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHCChh------hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHH
Confidence 44567788888888899999999998755 356788999999999999999999999998999999998888777
Q ss_pred HHHHHHHh
Q 014067 83 LSIPIFLL 90 (431)
Q Consensus 83 i~~iif~~ 90 (431)
++.+...+
T Consensus 129 ~~~~~~~~ 136 (141)
T TIGR00880 129 AAFILLAF 136 (141)
T ss_pred HHHHHHhh
Confidence 77665543
No 173
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=97.25 E-value=0.0092 Score=59.91 Aligned_cols=115 Identities=18% Similarity=0.118 Sum_probs=79.8
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.++..+...+...++.|+.+++.++..+| +-+..|.++.+++.+....... .
T Consensus 50 ~g~~~~~~~~~~~i~~~~~g~l~dr~g~k-----------~~l~~~~~~~~~~~~~~~~~~~-----------------~ 101 (402)
T TIGR00897 50 SASAFTLYGIAAAISAWISGVVAEIIGPL-----------KTMMIGLLLWCVGHAAFIVFGL-----------------G 101 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----------HHHHHHHHHHHHHHHHHHHHhc-----------------c
Confidence 34556667777777888887766544332 3356677777766544322210 0
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHH-HHhhhhhhhh
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGY-YFSTVLVSIV 376 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~-~l~~~l~~~~ 376 (431)
..+++.++..+++.+++.....+.....+.+..|++.|+..+|++....++|. .+++.+.+..
T Consensus 102 ~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l 165 (402)
T TIGR00897 102 HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYA 165 (402)
T ss_pred CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12455566778889999877777777888889999999999999999999986 5777776554
No 174
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.24 E-value=0.0024 Score=72.95 Aligned_cols=115 Identities=14% Similarity=0.034 Sum_probs=83.1
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..++..+..+++.|+.+++.+++.|| +-+.++.++.+++.+...+... .
T Consensus 50 ~~~~~~~~l~~~l~~~~~G~l~Dr~grk-----------~~l~~~~~~~~~~~~~~~~~~~------------------~ 100 (1146)
T PRK08633 50 AIVNALFLLPFLLLSSPAGFLADKFSKN-----------RVIRIVKLFEVGLTLLIVLAYY------------------L 100 (1146)
T ss_pred HHHHHHHHHHHHHHhhhHhhhcccccHH-----------HHHHHHHHHHHHHHHHHHHHHH------------------H
Confidence 3444555566667777777766544333 2244455444444433333210 1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNN 378 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~ 378 (431)
.++++++...++.|++..+..|...+++.+..|++.|+.++|+.....++|..+|+.+++++..
T Consensus 101 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 101 GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2467788889999999999999999999999999999999999999999999999999887753
No 175
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.22 E-value=0.018 Score=59.80 Aligned_cols=110 Identities=12% Similarity=0.052 Sum_probs=78.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHH
Q 014067 275 RIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLA 354 (431)
Q Consensus 275 ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~ 354 (431)
-..++++..+++.++..+. .+.+-++..-++.|+..-...........+..+.+.-+-.
T Consensus 367 ~~~~~ll~~gl~~~~~p~~---------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a 425 (509)
T KOG2504|consen 367 LFLLTLLIAGLARLFLPFA---------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNA 425 (509)
T ss_pred HHHHHHHHHHHHHHHHHHh---------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchH
Confidence 3556666666666444443 2344555666777887777777766788888999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 014067 355 TSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWA 421 (431)
Q Consensus 355 ~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~ 421 (431)
.|+..+..+++..+|+.+.+.+.+.++ . ++..|...++..+++.+++++..
T Consensus 426 ~Gl~l~~~gi~~l~gpPiag~~~d~tg-----~-----------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 426 YGLLLLFQGIGALVGPPIAGLLYDITG-----N-----------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHhHHHHHcCcccceeeeeccC-----C-----------eeeehhhcChHHHHHHHHHHHhH
Confidence 999999999999999999887765442 1 23446667777777776666665
No 176
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.18 E-value=0.008 Score=61.92 Aligned_cols=95 Identities=15% Similarity=0.168 Sum_probs=74.6
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCC
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLN 395 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n 395 (431)
|.+-++...+++|+.|....|........-=.++.||..+|+|+...++|+.+|+++..-+....+.....+|=
T Consensus 133 s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~------ 206 (495)
T KOG2533|consen 133 SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWR------ 206 (495)
T ss_pred hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCce------
Confidence 45567778899999999999999999999999999999999999999999999999987653322111122342
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHh
Q 014067 396 HYHLERFYWLMCILGGLNFLHFLFWA 421 (431)
Q Consensus 396 ~~~l~~~f~~la~l~~v~~i~~~~~~ 421 (431)
+.|.+-|+++++.+++.+++.
T Consensus 207 -----~~FiI~G~i~~~~gi~~f~~l 227 (495)
T KOG2533|consen 207 -----WLFIIEGVITLVLGIVVFFFL 227 (495)
T ss_pred -----eehhHHHHHHHHHHheEEEEe
Confidence 558888888888876555443
No 177
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.18 E-value=0.0086 Score=58.95 Aligned_cols=140 Identities=9% Similarity=-0.006 Sum_probs=85.1
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhH-HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIG-TGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~-~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
+++.+...+..++..|+.+++.++..+| +.+. .+.++.+++.+..+..
T Consensus 36 g~~~~~~~~~~~~~~~~~g~l~Dr~g~r-----------~~~~~~~~~~~~~~~~~~~~~-------------------- 84 (375)
T TIGR00899 36 GLFYTGSAIVGIAVSQLLATRSDYQGDR-----------KGLILFCCLLAALACLLFAWN-------------------- 84 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCc-----------hHHHHHHHHHHHHHHHHHHhc--------------------
Confidence 3455666666777888877765433221 2333 3444444444443332
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHH--HHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcC
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLA--TSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFG 391 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~--~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~ 391 (431)
.++++++...++++.++....|...+...+..|++.|+.. .+......++|..+++.+++.+... .+|-
T Consensus 85 -~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~------~~~~-- 155 (375)
T TIGR00899 85 -RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG------FGFT-- 155 (375)
T ss_pred -chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh------cccH--
Confidence 2445555556677777777788888888888888777643 5777777788888888887766421 1232
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHHHhhc
Q 014067 392 SNLNHYHLERFYWLMCILGGLNFLHFLFWAAR 423 (431)
Q Consensus 392 ~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~ 423 (431)
..|++.+.+.++..++.++..++
T Consensus 156 ---------~~f~~~~~~~~~~~~~~~~~~~~ 178 (375)
T TIGR00899 156 ---------VMFLTAALAFVLCGVLVWLFLPS 178 (375)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHhCCC
Confidence 34666666666666555554443
No 178
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.17 E-value=0.0043 Score=70.96 Aligned_cols=63 Identities=8% Similarity=-0.026 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.|+++++...+++|+++.+..|...+.+.+..|++.++.++|+.....++|..+|+.+++++.
T Consensus 106 ~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~ 168 (1140)
T PRK06814 106 NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLAT 168 (1140)
T ss_pred hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 367888899999999999999999999999999999999999999999999999999999875
No 179
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.16 E-value=0.0063 Score=62.49 Aligned_cols=177 Identities=11% Similarity=0.072 Sum_probs=102.4
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+....+.++..++.+|+.+++.++...|.++| .+. +..|.+..++++..++............ . ++....
T Consensus 42 ~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR----rp~--il~g~~~~~~~l~ll~~~~~~~~~~~~~---~-~~~~~~ 111 (477)
T TIGR01301 42 SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR----RPF--IAAGAALVAFAVILIGFAADIGHLFGDN---L-DKKTKP 111 (477)
T ss_pred HHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh----HHH--HHHHHHHHHHHHHHHHhCchhhhhcccc---c-cccchh
Confidence 45677888899999999999887644343322 111 3445677777777766643110000000 0 000012
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhh--hHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCc--
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMR--SLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLF-- 390 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~--g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~-- 390 (431)
..+++.+..+.+..++--...+..-+++.+.+|++.| +...+......++|+.+|..++++...... -++..
T Consensus 112 ~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~----~~~~~~~ 187 (477)
T TIGR01301 112 RAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKI----FPFTKTE 187 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHh----ccccccc
Confidence 2334445555555556666667778999999999876 578888889999999999998876421000 00000
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc
Q 014067 391 GSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYK 425 (431)
Q Consensus 391 ~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~ 425 (431)
+...-..+...-|.+-+++.+++.++-++..|.+.
T Consensus 188 ~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 188 ACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 00111123445566666666777666666666654
No 180
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.14 E-value=0.0099 Score=58.15 Aligned_cols=62 Identities=8% Similarity=0.043 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhcccc
Q 014067 319 WVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNIT 380 (431)
Q Consensus 319 wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~ 380 (431)
.+.....+.++.-....+....++.+..|.+.||..+|+.....+++..+||++.+....+.
T Consensus 354 ~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 354 VLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS 415 (451)
T ss_pred hhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence 34556788889999999999999999999999999999999999999999999987765443
No 181
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.05 E-value=0.017 Score=57.87 Aligned_cols=84 Identities=7% Similarity=-0.097 Sum_probs=66.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHH
Q 014067 276 IGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLAT 355 (431)
Q Consensus 276 i~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~ 355 (431)
+.++.++.++++..+++.+ ...+++++...+++.++......|...+++.+..|++.|+.+.
T Consensus 71 l~~~~~~~~l~~~~l~~~~------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~ 132 (402)
T PRK11902 71 LLLTQVGLAASIAAMAFCP------------------PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGA 132 (402)
T ss_pred HHHHHHHHHHHHHHHHhcC------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHH
Confidence 6666777777777665542 0135666777777888888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhc
Q 014067 356 SLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 356 gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
++.....++|..+++.+...+.
T Consensus 133 ~~~~~g~~~g~i~g~~l~~~l~ 154 (402)
T PRK11902 133 AVKVLGYRLAMLVSGGLALWLA 154 (402)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999988776654
No 182
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.05 E-value=0.0089 Score=61.78 Aligned_cols=90 Identities=12% Similarity=0.084 Sum_probs=69.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhH
Q 014067 274 QRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSL 353 (431)
Q Consensus 274 ~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~ 353 (431)
+-+.+++++.+++.+..++....- .-| ...+++++...+++|+++-...+....++.+..|++.||.
T Consensus 88 ~~l~~~~~l~~i~~~~~a~~~~~~-----~~g--------~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~ 154 (490)
T PRK10642 88 KILAITIVIMSISTFCIGLIPSYA-----TIG--------IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGF 154 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHH-----HHH--------HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcH
Confidence 457788888888888877764110 000 1122347888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhh
Q 014067 354 ATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 354 ~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
+++++.....+|..+++.+..++
T Consensus 155 ~~~~~~~~~~~G~~lg~~~~~~~ 177 (490)
T PRK10642 155 MGSWLDFGSIAGFVLGAGVVVLI 177 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888887766544
No 183
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.01 E-value=0.0093 Score=61.85 Aligned_cols=116 Identities=16% Similarity=0.077 Sum_probs=83.9
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcch
Q 014067 236 SLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPI 315 (431)
Q Consensus 236 ~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (431)
++.+...+..++..++..++.+++.|| +-+.+++++..++.+.+++.. +. ....
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr-----------~~~~~~~~~~~v~~~~~~~~~--------~~-------~~~~ 113 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRK-----------RVYGMELIIMIIATVASGLSP--------GS-------SPKS 113 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccH-----------HHHHHHHHHHHHHHHHHHHcc--------Cc-------ccch
Confidence 345555556666777777666554443 224566666666655554431 00 0112
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
+.++++...++.|+++....+....++.+.+|++.||..++++.....+|..+++.+...+.
T Consensus 114 ~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~ 175 (502)
T TIGR00887 114 VMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVL 175 (502)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46678899999999999999999999999999999999999999999999999988876543
No 184
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=96.99 E-value=0.019 Score=59.08 Aligned_cols=105 Identities=13% Similarity=0.023 Sum_probs=66.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHH
Q 014067 239 VFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFL 318 (431)
Q Consensus 239 ~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~ 318 (431)
+...+..++..++.+++.+++.+| +-+..+.++.+++.+..++.. +.+
T Consensus 78 ~~~~~~~~~~~~~~G~l~dr~G~r-----------~~~~~~~~~~~~~~~~~~~~~---------------------s~~ 125 (476)
T PLN00028 78 IASVSGSIFSRLAMGPVCDLYGPR-----------YGSAFLLMLTAPAVFCMSLVS---------------------SAT 125 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCh-----------HHHHHHHHHHHHHHHHHHHhc---------------------CHH
Confidence 333444444555665554433222 335566776666666555531 344
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 319 WVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 319 wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
.+....++.|+++.... .....+.+..|++.||..+|++.....+|..+++.+...+
T Consensus 126 ~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i 182 (476)
T PLN00028 126 GFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV 182 (476)
T ss_pred HHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566788999987644 3456788999999999999999877777777666555443
No 185
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.98 E-value=0.18 Score=52.40 Aligned_cols=80 Identities=19% Similarity=0.281 Sum_probs=60.5
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccc-cCchhHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDN-KGWQWGFGISTAT 80 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~-~g~~~~F~i~~i~ 80 (431)
+++|+++.++|.|+..-.+.-.+++.-+++ .|...-+.+.+++++|.+++..+.....+. ++|+..+.+..+.
T Consensus 145 l~~GR~l~G~g~G~~~~~~piy~sEiap~~------~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~ 218 (513)
T KOG0254|consen 145 LIVGRILTGLGVGGASVLAPVYISEIAPAH------IRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIP 218 (513)
T ss_pred HHHHHHHhccchhhhhhcchhhHhhcCChh------hhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHH
Confidence 678999999999999977777777776533 466777888999999999996665555543 5899888777766
Q ss_pred HHHHHHH
Q 014067 81 ILLSIPI 87 (431)
Q Consensus 81 ~~i~~ii 87 (431)
.++-.+.
T Consensus 219 ~~~~~~~ 225 (513)
T KOG0254|consen 219 AVILALG 225 (513)
T ss_pred HHHHHHH
Confidence 6655544
No 186
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=96.97 E-value=0.0079 Score=59.63 Aligned_cols=115 Identities=15% Similarity=0.115 Sum_probs=91.9
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCch
Q 014067 270 ITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLS 349 (431)
Q Consensus 270 ~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~ 349 (431)
.+|.+=|.+|++++++..+.+++. .|++.+...+++.|.-+-.-.|.....++.--|++
T Consensus 91 ~npr~fm~~gLilsai~nil~Gfs---------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~ 149 (448)
T COG2271 91 SNPRYFMAFGLILSAIVNILFGFS---------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRK 149 (448)
T ss_pred CCCceeehHHHHHHHHHHHHHhhh---------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCcc
Confidence 466666999999999999998886 36677778888888888888899999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhh--hhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014067 350 MRSLATSLSWASLAMGYYFSTVLV--SIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAA 422 (431)
Q Consensus 350 ~~g~~~gl~~l~~~iG~~l~~~l~--~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~ 422 (431)
.||...++|+.+.++|+.+.+.+. ..+.. ..+|- .-|+.-++++++..++.++..|
T Consensus 150 eRG~~~siWn~shNiGGal~~~~~~la~~~~------~~~w~-----------~~f~~pgiiaiival~~~~~~r 207 (448)
T COG2271 150 ERGTWWSIWNTSHNIGGALAPLVALLAFFAF------HGGWR-----------AAFYFPGIIAIIVALILLFLLR 207 (448)
T ss_pred ccCceEEEehhhhhcccchHHHHHHHHHHHh------ccchh-----------HHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999888 44431 01343 3467777777777776666554
No 187
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=96.96 E-value=0.013 Score=57.59 Aligned_cols=110 Identities=16% Similarity=0.191 Sum_probs=79.1
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.++..+++.+...+..|+.+++.+++.+| +.+.+|.++.+++.+.. ..
T Consensus 37 ~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----------~~~~~~~~~~~~~~~~~-~~-------------------- 84 (355)
T TIGR00896 37 AGLLTALPVLCFAVLAPLAPWLARRFGEE-----------RSVAAGLLLIAAGILIR-SA-------------------- 84 (355)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhCch-----------HHHHHHHHHHHHHHHHH-Hh--------------------
Confidence 35567788888888888888876554433 33566666666555443 21
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+.++++...++.+++..+..+.....+.+..| +.|+..+|++.....+|..+++.+...+.
T Consensus 85 -~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~ 146 (355)
T TIGR00896 85 -PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLA 146 (355)
T ss_pred -ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234556677888999998877777777777776 57999999999999999999888876653
No 188
>PRK10133 L-fucose transporter; Provisional
Probab=96.94 E-value=0.013 Score=59.65 Aligned_cols=113 Identities=12% Similarity=0.042 Sum_probs=84.8
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.+...+...+..|+.+++.+++.+| +-+.+|+++.+++.+...... ..
T Consensus 64 gl~~~~~~~g~~i~~~~~g~l~dr~G~r-----------~~l~~g~~~~~~~~~l~~~~~------------------~a 114 (438)
T PRK10133 64 GLIQSAFYFGYFIIPIPAGILMKKLSYK-----------AGIITGLFLYALGAALFWPAA------------------EI 114 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHHHH------------------hc
Confidence 4556666777778888887766554433 346778888888776543221 01
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
.++++++...++.|+|.-...+....++.+..|++.+...++++....++|..+++.++..+
T Consensus 115 ~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 115 MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677888999999999999999999999988888887788998888899999998887654
No 189
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.93 E-value=0.11 Score=51.79 Aligned_cols=87 Identities=17% Similarity=0.223 Sum_probs=63.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhH
Q 014067 274 QRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSL 353 (431)
Q Consensus 274 ~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~ 353 (431)
+.+.+|+++..+..+...+.+ .+..+ |... ++.+...-=+....=++..+.+|++..+.
T Consensus 319 ~vl~~~lvi~~~~~~~~~~~~------------------~~~~f-~i~g--ll~g~s~G~~qA~SRSy~~~lvp~~k~~~ 377 (438)
T COG2270 319 PVLMIGLVILSIAALYLIFLE------------------GELDF-WILG--LLVGTSLGGAQASSRSYLARLVPKGKEGR 377 (438)
T ss_pred eeehHHHHHHHHHHHHHHHcc------------------ccHHH-HHHH--HHHHHhcchHHHHHHHHHHHhCCCccccc
Confidence 556677776666655555543 12333 3321 44444444455667789999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccccc
Q 014067 354 ATSLSWASLAMGYYFSTVLVSIVNNITS 381 (431)
Q Consensus 354 ~~gl~~l~~~iG~~l~~~l~~~~~~~~~ 381 (431)
..|++.++.-.++.+|+.+.+++..+|+
T Consensus 378 fFglyaltgra~S~~gp~lv~v~t~iTg 405 (438)
T COG2270 378 FFGLYALTGRAASFLGPFLVAVITQITG 405 (438)
T ss_pred eeehhhhhhhHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999987774
No 190
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=96.88 E-value=0.033 Score=56.48 Aligned_cols=110 Identities=13% Similarity=0.075 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHH
Q 014067 248 LAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFL 327 (431)
Q Consensus 248 ~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~ 327 (431)
..|+-..+.-++.+|.++ .+-+.+++++.+++.+..++.... . . ....++.+++...+++
T Consensus 75 ~~~ig~~~~G~l~Dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~----~-~--------~~~~~~~~l~~~R~l~ 134 (432)
T PRK10406 75 MRPIGGWLFGRIADKHGR-------KKSMLISVCMMCFGSLVIACLPGY----E-T--------IGTWAPALLLLARLFQ 134 (432)
T ss_pred HHHHHHHHHHHHHHhcCc-------HHHHHHHHHHHHHHHHHHhhcCCc----h-h--------HHHHHHHHHHHHHHHH
Confidence 334444455555565432 244777888887777776664210 0 0 0013456788889999
Q ss_pred HhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 328 GSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 328 ~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
|+++-...|....++.+..|++.||.+++++......|..+++.+...+.
T Consensus 135 G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 184 (432)
T PRK10406 135 GLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQ 184 (432)
T ss_pred HhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888888888877655543
No 191
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.81 E-value=0.022 Score=58.82 Aligned_cols=135 Identities=11% Similarity=0.065 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHH-hhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHH
Q 014067 243 IFILILAPVYNHVIIPF-ARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVA 321 (431)
Q Consensus 243 ~~iil~~pl~~~~~~pl-~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli 321 (431)
....+..++.+++-+++ .+| +-+.+|.++.+++.+.++..+ .+..++.
T Consensus 56 ~~~~l~~ligG~LaDRilGrr-----------r~iliG~il~~lg~lll~~~~--------------------~~~~~~~ 104 (493)
T PRK15462 56 SLVYVTPILGGFLADKVLGNR-----------MAVMLGALLMAIGHVVLGASE--------------------IHPSFLY 104 (493)
T ss_pred HHHHHHHHHHHHHHHHccCcH-----------HHHHHHHHHHHHHHHHHHHhh--------------------cchhHHH
Confidence 34444555666665544 222 336788888877766544321 1111222
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCch--hhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchh
Q 014067 322 LQYLFLGSADLFTLAGMMEFFFTDAPLS--MRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHL 399 (431)
Q Consensus 322 ~~~~l~~igE~~~~~~~~~~~~~~aP~~--~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l 399 (431)
....+..+|.-+..+...+++.++-|++ .|....++++....+|+.+++.+.+.+.... +|-
T Consensus 105 l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~------Gw~---------- 168 (493)
T PRK15462 105 LSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY------SWA---------- 168 (493)
T ss_pred HHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh------ChH----------
Confidence 3334445555556676678888888875 7888999999999999999999988874211 232
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccc
Q 014067 400 ERFYWLMCILGGLNFLHFLFWAARYK 425 (431)
Q Consensus 400 ~~~f~~la~l~~v~~i~~~~~~~~~~ 425 (431)
.-|.+.++.++++.+.+++..|++.
T Consensus 169 -~~F~iaaigm~l~li~~~~~~~~l~ 193 (493)
T PRK15462 169 -MGFGLAAVGMIAGLVIFLCGNRHFT 193 (493)
T ss_pred -HHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 3466666666666666665555543
No 192
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.77 E-value=0.012 Score=57.87 Aligned_cols=90 Identities=14% Similarity=0.108 Sum_probs=68.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHH
Q 014067 275 RIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLA 354 (431)
Q Consensus 275 ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~ 354 (431)
-+.+|.++.+++.+..++.... . . ......++++...+++|++.....+....++.+..|++.|+.+
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~~----~-~--------~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 133 (394)
T TIGR00883 67 TLVITLLMMGIGTLLIGLLPSY----A-T--------IGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFY 133 (394)
T ss_pred HHHHHHHHHHHHHHHHhhCCCh----h-h--------hHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHH
Confidence 3667777777777666654210 0 0 0012233567778999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhc
Q 014067 355 TSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 355 ~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
++++.....+|..+++.+...+.
T Consensus 134 ~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 134 GSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876654
No 193
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=96.70 E-value=0.0018 Score=65.54 Aligned_cols=83 Identities=12% Similarity=0.150 Sum_probs=66.1
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHH-HHHHHHHHHHhhhhhhcccc------cCchhHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYV-FCLSCGALIAVTFVVWIEDN------KGWQWGFG 75 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y-~~iNiG~~i~~~~~~~l~~~------~g~~~~F~ 75 (431)
++...+.+++.+...++...++.|+++++ +|.+++++++ ...++|+.+||+++|++.++ +||+.+|.
T Consensus 312 ~l~~~l~g~~~~~~~~~~~~~i~~~~p~~------~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~ 385 (418)
T TIGR00889 312 FLSMIVYGCAFDFFNISGSVFVEKEVPVH------IRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWL 385 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHH
Confidence 34556677788888888889999998744 3677899987 56789999999999999887 46999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 014067 76 ISTATILLSIPIFLLG 91 (431)
Q Consensus 76 i~~i~~~i~~iif~~~ 91 (431)
++++..+++.+++++.
T Consensus 386 ~~~~~~~i~~~l~~~~ 401 (418)
T TIGR00889 386 FFAGYIAILAVLFMIF 401 (418)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9888877776665544
No 194
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=96.66 E-value=0.029 Score=58.51 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=88.5
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.+.++....+..+++.|+.+.+.+++-|| +-+..+-++.++..+..++... . .
T Consensus 47 valv~~a~~LP~~Llsl~aG~laDr~drr-----------rili~~~~~~~~~~~~L~~l~~--------~--------~ 99 (524)
T PF05977_consen 47 VALVQAASTLPILLLSLFAGALADRFDRR-----------RILILSQLLRALVALLLAVLAF--------F--------G 99 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccch-----------HHHHHHHHHHHHHHHHHHHHHH--------h--------C
Confidence 35668888889999999998877655433 2244444444444333333321 0 1
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
..++|.++..-++.+++..+..|+-.+.+-++.|++.-..+.++.....+++..+||.+++.+-
T Consensus 100 ~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv 163 (524)
T PF05977_consen 100 LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILV 163 (524)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 4677778888899999999999999999999999999999999999999999999998888764
No 195
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.59 E-value=0.046 Score=51.57 Aligned_cols=147 Identities=11% Similarity=0.178 Sum_probs=96.4
Q ss_pred cCCCCcCchhHH---HHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 014067 232 VPPASLPVFPVI---FILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVN 308 (431)
Q Consensus 232 ip~~~l~~~n~~---~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~ 308 (431)
+++..-.++|.. ...++.|+++.+.++..++. ..+..+.++..++=...++..
T Consensus 297 lS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~----------~wv~~a~~~tl~~H~~l~Ft~-------------- 352 (459)
T KOG4686|consen 297 LSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL----------WWVASACILTLLGHSGLFFTF-------------- 352 (459)
T ss_pred CChhhccchhhhhhhhhhhhhhhHHHhHhhhccee----------hhHHHHHHHHHHHhhhHHhhh--------------
Confidence 334333444443 34467888999888776552 223334333333322222221
Q ss_pred CCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCC
Q 014067 309 SSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPW 388 (431)
Q Consensus 309 ~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w 388 (431)
.|+| ....++|++.-+..-..+..+..+.|++.-|+.-|......++|-.+.+.+.+++.+..+ ++
T Consensus 353 ------lsPy---~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g-----~y 418 (459)
T KOG4686|consen 353 ------LSPY---TSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG-----SY 418 (459)
T ss_pred ------ccHH---HHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC-----ch
Confidence 2332 356788888888888889999999999999999999999999999999888888763221 11
Q ss_pred CcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcc
Q 014067 389 LFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARY 424 (431)
Q Consensus 389 ~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~ 424 (431)
..++.||..++.+++.+..+.+.+-|+-
T Consensus 419 --------~~le~ffl~~~~~aL~svgil~~~N~kq 446 (459)
T KOG4686|consen 419 --------DNLEAFFLIIGLMALTSVGILFYLNKKQ 446 (459)
T ss_pred --------hhHHHHHHHHHHHHHHHHHHHhheeccc
Confidence 2367888888888888776666555543
No 196
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.58 E-value=1.1 Score=46.43 Aligned_cols=77 Identities=17% Similarity=0.119 Sum_probs=63.8
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATI 81 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~ 81 (431)
+.+.+.+.+++.++...+....++|.++++ +|..+-++ +.....|+.+++..++++.. +|++.+.+..+..
T Consensus 174 ~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~------~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~ 244 (521)
T KOG0255|consen 174 FLIFRFLSGFFGSGPLTVGFGLVAEIVSPK------QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPS 244 (521)
T ss_pred HHHHHHHHHhhccchhHHhHhhheeecCcc------hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHH
Confidence 466778899999999999999999999865 35556666 77888889999999999887 8999999888877
Q ss_pred HHHHHH
Q 014067 82 LLSIPI 87 (431)
Q Consensus 82 ~i~~ii 87 (431)
++.++.
T Consensus 245 ~~~~~~ 250 (521)
T KOG0255|consen 245 GLFLLL 250 (521)
T ss_pred HHHHHH
Confidence 777665
No 197
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.53 E-value=0.073 Score=54.46 Aligned_cols=84 Identities=11% Similarity=0.076 Sum_probs=69.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHH
Q 014067 275 RIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLA 354 (431)
Q Consensus 275 ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~ 354 (431)
-+.+|++.-.++..+.++... + |+.-........-.+..|...+++.+++.++.+|..
T Consensus 310 ~i~lGl~~~~~~~~~~af~~~------------------~----w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v 367 (463)
T KOG2816|consen 310 LISLGLLSEFLQLLLFAFATE------------------T----WMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKV 367 (463)
T ss_pred HhhHHHHHHHHHHHHHHHhcc------------------c----hhhhHHHHHHHhhcchhHHHHhHHHhhcccccccch
Confidence 466888888888888888641 1 555556666666777889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhcccc
Q 014067 355 TSLSWASLAMGYYFSTVLVSIVNNIT 380 (431)
Q Consensus 355 ~gl~~l~~~iG~~l~~~l~~~~~~~~ 380 (431)
+++.....++.+.+++.+.+.+...|
T Consensus 368 ~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 368 FGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred hhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999999999988876665
No 198
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=96.50 E-value=0.014 Score=58.89 Aligned_cols=121 Identities=12% Similarity=0.107 Sum_probs=80.2
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+.+.++..+.-.+..|+.+.+.++..+|.++| ...+.+|.++.+++++.+.... . ....
T Consensus 38 g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grr------r~~i~~~~~~~~i~~~~~~~~~--------~-------~~~~ 96 (437)
T TIGR00792 38 GTLFLVARILDAITDPIMGNIVDRTRTRWGKF------RPWLLIGAIPFSIVLVLLFTTP--------D-------FSAT 96 (437)
T ss_pred HHHHHHHHHHHHhccchheEeeecCCCCCCCc------chhHHHhHHHHHHHHHHHHhCC--------C-------CCcc
Confidence 34455566666777777777666543333221 1125667777777666554431 0 0012
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhccc-CchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDA-PLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~a-P~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
...+|.+..+++.+++..+..+...+...+.+ |++.|+...+.......+|..+++.+...+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l 159 (437)
T TIGR00792 97 GKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPL 159 (437)
T ss_pred hHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678888899999999888888788888887 468899999998888888888776664443
No 199
>PRK15075 citrate-proton symporter; Provisional
Probab=96.45 E-value=0.11 Score=52.62 Aligned_cols=91 Identities=20% Similarity=0.136 Sum_probs=64.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhH
Q 014067 274 QRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSL 353 (431)
Q Consensus 274 ~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~ 353 (431)
+-+..+.++.+++.+..++....-. . ......+++..-++.|+++-...+....++.+..|++.|+.
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~~~-~------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~ 153 (434)
T PRK15075 87 KGLIVTLSIMASGTLLIAFVPGYAT-I------------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGF 153 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHH-H------------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchH
Confidence 4467777777777777666531000 0 00011245667789999999888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 354 ATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 354 ~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.++++.....+|..+++.++..+.
T Consensus 154 ~~~~~~~~~~~g~~~g~~~g~~l~ 177 (434)
T PRK15075 154 YTSWQSASQQVAVVFAALLGYLLN 177 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988887777777777666553
No 200
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.39 E-value=0.3 Score=49.99 Aligned_cols=82 Identities=12% Similarity=-0.013 Sum_probs=57.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhH
Q 014067 274 QRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSL 353 (431)
Q Consensus 274 ~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~ 353 (431)
+-+.++.++.++..+..++... + ...|++.++...++.|++ ....+.....+.+..|++.||+
T Consensus 101 ~v~~~~~ll~~i~~~~~~~a~~-------------~---~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~ 163 (462)
T PRK15034 101 RWTVFSTAILIIPCVWLGIAVQ-------------N---PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGS 163 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-------------c---cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHH
Confidence 4566777777777766665310 0 114677788889999998 5577889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhh
Q 014067 354 ATSLSWASLAMGYYFSTVL 372 (431)
Q Consensus 354 ~~gl~~l~~~iG~~l~~~l 372 (431)
++|++.....+|..++..+
T Consensus 164 A~Gi~~g~G~~G~~l~~~l 182 (462)
T PRK15034 164 ALGINGGLGNLGVSVMQLV 182 (462)
T ss_pred HHHHHHHHHhhHHHHHHHH
Confidence 9999954444444444333
No 201
>PRK09952 shikimate transporter; Provisional
Probab=96.38 E-value=0.06 Score=54.76 Aligned_cols=111 Identities=16% Similarity=0.094 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHH
Q 014067 247 ILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLF 326 (431)
Q Consensus 247 l~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l 326 (431)
+..|+-..+.-++.+|.+ ..+-+.+++++.+++.+..++....- .- ...+++.++...++
T Consensus 75 ~~~~~g~~~~G~l~Dr~G-------rr~~l~~~~~~~~~~~~~~~~~~~~~-----~~--------~~~~~~~l~~~R~l 134 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLG-------RKRMLMLTVWMMGIATALIGLLPSFS-----TI--------GWWAPVLLVTLRAI 134 (438)
T ss_pred HHHhhHHHHHHHHHHhhc-------cHHHHHHHHHHHHHHHHHHhcCCcHH-----HH--------HHHHHHHHHHHHHH
Confidence 445665555566666643 22446677877777777766653100 00 00123346778899
Q ss_pred HHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 327 LGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 327 ~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
+|+++-...|....++.+..|++.||.+++......++|..++..+...+.
T Consensus 135 ~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~ 185 (438)
T PRK09952 135 QGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLIS 185 (438)
T ss_pred HHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998877665543
No 202
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.32 E-value=0.067 Score=54.88 Aligned_cols=117 Identities=13% Similarity=0.211 Sum_probs=91.3
Q ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchh
Q 014067 271 THLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSM 350 (431)
Q Consensus 271 s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~ 350 (431)
...+-+..+.++.+++-+...++. ..+.+.++..-+++|++|-...|....+..+-+|++.
T Consensus 101 G~r~v~~~~~~~sa~~t~l~P~aa-------------------~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E 161 (466)
T KOG2532|consen 101 GARRVFFISGLISALLTLLTPLAA-------------------SIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE 161 (466)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHH-------------------HhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH
Confidence 444568888888888777766654 2455577889999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014067 351 RSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAA 422 (431)
Q Consensus 351 ~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~ 422 (431)
|++..++......+|..++..+++.+.... -+|= .-|.+.|+++++-.+++.++.+
T Consensus 162 rs~~~ail~~g~q~g~v~~mp~sg~lc~s~-----~GW~-----------sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 162 RSTFIAILTAGSQLGTIITMPVSGLLCESS-----LGWP-----------SIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHhccC-----CCCc-----------hHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999988888775331 3563 3355667777777666666554
No 203
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.25 E-value=0.064 Score=57.21 Aligned_cols=89 Identities=15% Similarity=0.164 Sum_probs=67.2
Q ss_pred ChhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccc-------------
Q 014067 1 MLFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDN------------- 67 (431)
Q Consensus 1 ~~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~------------- 67 (431)
+|++|..+.++|...+.|--.+.+=|-..++ +....++++|..--+|.++|.+++++..+-
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~------~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~ 312 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKK------NSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITP 312 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCcccccccccc------CCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCC
Confidence 3678888899998887776666655554433 235688999999999999999999976431
Q ss_pred -----c-CchhHHHHHHHHHHHHHHHHHhcCcce
Q 014067 68 -----K-GWQWGFGISTATILLSIPIFLLGSPFY 95 (431)
Q Consensus 68 -----~-g~~~~F~i~~i~~~i~~iif~~~~~~~ 95 (431)
+ -||++|++++..++++.+-+++.-|.+
T Consensus 313 ~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 313 TDPRWIGAWWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 1 499999999999999888776654433
No 204
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.13 E-value=0.15 Score=50.89 Aligned_cols=91 Identities=11% Similarity=0.070 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhh--hHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCC
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMR--SLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSN 393 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~--g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~ 393 (431)
+.++++....+.+..+....|...+.+.+..|++-| +.+.+......++|..+++.+++.+.... +|-
T Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~------gw~---- 173 (393)
T PRK15011 104 NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF------SFT---- 173 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc------ChH----
Confidence 344444444445555556678888888777666544 45668888888999999999988774211 232
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhhc
Q 014067 394 LNHYHLERFYWLMCILGGLNFLHFLFWAAR 423 (431)
Q Consensus 394 ~n~~~l~~~f~~la~l~~v~~i~~~~~~~~ 423 (431)
.-|++.+++.++..+...+..|+
T Consensus 174 -------~~f~~~~~~~~~~~~~~~~~~~~ 196 (393)
T PRK15011 174 -------VMYLSAAVAFIVCGVMVWLFLPS 196 (393)
T ss_pred -------HHHHHHHHHHHHHHHHHHhhcCc
Confidence 34667777776666655554444
No 205
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.02 E-value=0.097 Score=55.85 Aligned_cols=151 Identities=14% Similarity=0.107 Sum_probs=99.9
Q ss_pred CchhhhHHHHHHHHHHHHHHHHHHH----HHHhhhh-----hcC-----------CCC-----CCC-----CcchhHH-H
Q 014067 271 THLQRIGTGLILSIVAMAVAALVEI----KRKRVAV-----NSG-----------LVN-----SSE-----PLPITFL-W 319 (431)
Q Consensus 271 s~~~ki~~G~~l~~l~~~~~~~~~~----~~~~~~~-----~~g-----------~~~-----~~~-----~~~~s~~-w 319 (431)
..++-+++|.++++++.++.++.+. .+++... +.. ..+ .++ .....+| .
T Consensus 160 HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 239 (735)
T KOG3626|consen 160 HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLL 239 (735)
T ss_pred CccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHH
Confidence 4457799999999999999887752 1121111 000 000 000 1112233 4
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCC-Cc--CCCCCc
Q 014067 320 VALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPW-LF--GSNLNH 396 (431)
Q Consensus 320 li~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w-~~--~~~~n~ 396 (431)
++..-++.|+|+.-+.+.|.+++.+.+-++...++.|+.+....+|-.+|-+++++..+.-. ++ .. ..+.+|
T Consensus 240 ff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYv-----D~~~~~~~it~~D 314 (735)
T KOG3626|consen 240 FFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYV-----DFGLSPIGITPTD 314 (735)
T ss_pred HHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeee-----ccccCCCCCCCCC
Confidence 56788999999999999999999999999999999999999988777777777766654331 11 10 113334
Q ss_pred chhhHH----HHHHHHHHHHHHHHHHHHhhcccc
Q 014067 397 YHLERF----YWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 397 ~~l~~~----f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
++-.-- |++.+++.++..+-+++.=|.+..
T Consensus 315 PrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 315 PRWIGAWWLGFLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcc
Confidence 442222 566778888888888887777754
No 206
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.01 E-value=0.086 Score=54.87 Aligned_cols=106 Identities=13% Similarity=0.091 Sum_probs=88.6
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+++.+...+...+..++.+++.+.+.|| +-+.++.++..++.++.+++
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk-----------~~l~~~~~~~~iG~ii~~~a--------------------- 139 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRK-----------KTLLLAVVLFLIGAIIIALA--------------------- 139 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhH-----------HHHHHHHHHHHHHHHHHHHh---------------------
Confidence 5777788888888888888877777665 23667777777777777665
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhh
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVL 372 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l 372 (431)
.++++++...++.|+|--+.+....-++.+.+|++.||.+.++..+...+|..++-.+
T Consensus 140 ~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~ 197 (513)
T KOG0254|consen 140 PSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCI 197 (513)
T ss_pred hhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2678999999999999999999999999999999999999999999999998888333
No 207
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=95.95 E-value=0.013 Score=61.57 Aligned_cols=210 Identities=17% Similarity=0.135 Sum_probs=118.4
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATIL 82 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~ 82 (431)
|+...+..-+ +..++|++++.|+++....- -+.+..+|..+|+.+|+++++..+. .|+++...++
T Consensus 63 ylt~~~~~~~-~~aa~~v~~f~G~~~~~~l~--g~~laD~f~gry~tI~~~s~i~~~G------------~~~lt~~a~~ 127 (571)
T KOG1237|consen 63 YLTLELHASG-GGAANNVNAFGGTQFLLPLL--GAFLADSFLGRYFTINIGSLISLLG------------LFGLTLSAMI 127 (571)
T ss_pred HHHHHhccch-HHHHHHHHHHhhHHHHHHHH--HHHHHHHHhHHHHHHHHHHHHHHHH------------HHHHHHHHHh
Confidence 4455555555 88999999999999975321 2356778999999999999986544 6677777777
Q ss_pred HHHHHHHhcCcceeec-CCCCCchhHHHHHHHHHHHhhcCCCCCCcccccCCCCCCCCCCCcccccccccCCCCCCCCch
Q 014067 83 LSIPIFLLGSPFYRNK-IPTGSPLTTIFKVLTAAIFNTCKSKNSSNAVTEVHSSPTCSNESRDEGNSNVKEKVPSQKPTE 161 (431)
Q Consensus 83 i~~iif~~~~~~~~~~-~p~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~~~~~~~~~~ 161 (431)
.++..+-+ .+... ...++|-.....++..++........ . .+.++..- +.
T Consensus 128 ~~l~p~~~---~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~g-------------g------~r~~~~~f-------Ga 178 (571)
T KOG1237|consen 128 PALLPFMC---KFKPGGNVCESPSKLQLAVLYGALYLIALGAG-------------G------IRPCLLAF-------GA 178 (571)
T ss_pred hhcCCccc---cCCCCCCcccCcchHHHHHHHHHHHHheeccC-------------C------CCCcchhh-------cc
Confidence 66543332 11110 01112222233344444433221100 0 00000000 00
Q ss_pred hHHHHhhhccCCCCCCccccccchhhHHHHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhcc-CCCCcccCCCCcCch
Q 014067 162 DIKFLNRALRNNPAYPIVQCTVKEVEEVKIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNT-KLGSLKVPPASLPVF 240 (431)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~-~~gg~~ip~~~l~~~ 240 (431)
|+.+ ...+ ++++ .....++|..+.|..+.++.+...++. +..||.+-.+..+..
T Consensus 179 dQfd----------------~~~~-~~~~--------~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~ 233 (571)
T KOG1237|consen 179 DQFD----------------ELDP-VEVK--------GIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVL 233 (571)
T ss_pred cccC----------------ccCc-chhh--------CcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHH
Confidence 0000 0000 1111 134566788888888888777654443 335787888888999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHH
Q 014067 241 PVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAA 291 (431)
Q Consensus 241 n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~ 291 (431)
|.+.+++|.|....+.+|. +.-..+..++.++.+++.-..+
T Consensus 234 ~~lai~iF~~g~~~y~~~~----------p~gsp~t~i~~Vlvaa~~k~~~ 274 (571)
T KOG1237|consen 234 NALAILIFLPGFPFYRYKK----------PRGSPKTRIGQVLVAAAFKRKA 274 (571)
T ss_pred HHHHHHHHHcCceeEEeeC----------CCCCchhHHHHHHHHHHHHHhc
Confidence 9999999988766543222 2222567778888887776644
No 208
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=95.78 E-value=0.42 Score=50.35 Aligned_cols=122 Identities=12% Similarity=0.111 Sum_probs=81.9
Q ss_pred HhccCCCCcccCCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 014067 222 TMNTKLGSLKVPPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVA 301 (431)
Q Consensus 222 ~~~~~~gg~~ip~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~ 301 (431)
++..++|+-. ...|+...+.+..-+..|+++++.+-+.||. -+..|.++..++..+.+-.+
T Consensus 69 ~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~-----------~~i~g~~l~vvG~Iv~atA~------- 129 (599)
T PF06609_consen 69 YINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLFGRRY-----------FFIIGSLLGVVGSIVCATAQ------- 129 (599)
T ss_pred HHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHhcchH-----------HHHHHHHHHHhHHHHhhcCC-------
Confidence 3445566432 2457778888888889999999888777652 35677788888877766542
Q ss_pred hhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 302 VNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 302 ~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
|+.-++...++.|+|--..... ...+.+..|.+.|....++.....-+....|+.+...+.
T Consensus 130 --------------~~~~~iag~~l~GvgaG~~~~~-~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 130 --------------NMNTFIAGMVLYGVGAGVQELA-ALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred --------------cHHHHHHHHHHHHHhhHHHHHH-HHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 2334566677777775555443 455788999999988777666655555556666665543
No 209
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=95.73 E-value=0.19 Score=50.18 Aligned_cols=116 Identities=10% Similarity=0.057 Sum_probs=68.2
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+.+.++..+...+..|+.+++.++..|| +.+..+++..+++............ ..
T Consensus 41 g~~~~~~~l~~~i~~~~~G~l~Dr~grr-----------~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 95 (396)
T TIGR00882 41 GIVFSCISLFSILFQPLFGLISDKLGLK-----------KHLLWIISGLLVLFAPFFIYVFGPL--------------LQ 95 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHHHHhhhH--------------HH
Confidence 5667788888889999999988776554 1233333333332221111100000 00
Q ss_pred hhHH-HHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFL-WVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~-wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
...+ ..+...++.+++.....|...+++.+..++ ++...|......++|..+++.+++.+.
T Consensus 96 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~g~~~~g~l~ 157 (396)
T TIGR00882 96 SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--SNFEYGKARMFGCVGWALCASIAGILF 157 (396)
T ss_pred HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--cccccchhhhhcccHHHHHHHHHhhhh
Confidence 1122 345567788888888888887777766554 344556666666788888888877664
No 210
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.72 E-value=0.054 Score=53.84 Aligned_cols=124 Identities=17% Similarity=0.142 Sum_probs=87.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCch---hh
Q 014067 275 RIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLS---MR 351 (431)
Q Consensus 275 ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~---~~ 351 (431)
-+.+|.++..+|.+++.+.... ... ....+...+.....++++|.-++-|....+..+|-+++ .+
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~--------~~~----~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~ 70 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIP--------PSL----PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRR 70 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTS--------SSC----------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhc--------chh----hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhh
Confidence 3678888888888886665310 000 01234556777888999999999999999999999887 34
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 014067 352 SLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYKYS 427 (431)
Q Consensus 352 g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~~ 427 (431)
......++....+|+.++..+..++.+- .+|. ..|++.++.++++.+.|+.-.++|+.+
T Consensus 71 ~~~F~~fY~~in~G~~~~~~~~~~i~~~------~~~~-----------~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 71 DSFFNWFYWGINIGSLFSPTLVPYIQQN------YGWF-----------LGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHHC------S-HH-----------HHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhHHHHHHHHhhhhHhhcccchhhccc------cchh-----------hhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 4566677888899999998887777521 2333 568888889999999999888888776
No 211
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.72 E-value=0.17 Score=50.75 Aligned_cols=45 Identities=16% Similarity=-0.121 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHH
Q 014067 318 LWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASL 362 (431)
Q Consensus 318 ~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~ 362 (431)
+++...-.+++..+.-..|++.|+.-+..=+...+...|+-.+..
T Consensus 360 viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~g 404 (480)
T KOG2563|consen 360 VIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSG 404 (480)
T ss_pred EehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeeh
Confidence 344445567788888889999999999999999999999877643
No 212
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=95.70 E-value=0.76 Score=45.75 Aligned_cols=93 Identities=22% Similarity=0.287 Sum_probs=67.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHH---HHHHHHHHHhhhhhhhhhhhhhhhcccCchhhh
Q 014067 276 IGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLW---VALQYLFLGSADLFTLAGMMEFFFTDAPLSMRS 352 (431)
Q Consensus 276 i~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~w---li~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g 352 (431)
+-.|.++.+.+...+...-... +. .+ ++ + ...++.| ....|++.|+|--......++.+.|.+|++.|+
T Consensus 53 I~~G~~~~~~g~~~ap~a~~~l---~~-~~--~~-~-~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~ 124 (403)
T PF03209_consen 53 IWGGTLLQAGGLAIAPFALLLL---AE-SG--QQ-S-SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRP 124 (403)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH---cc-cc--cc-c-ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhh
Confidence 6678887777776665543211 11 00 00 0 1122333 457889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 353 LATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 353 ~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
...++.+.+.-+|-.+++.+.+..
T Consensus 125 ~~v~ivw~Mli~G~iv~ai~~g~l 148 (403)
T PF03209_consen 125 RVVAIVWVMLIVGIIVSAIVFGRL 148 (403)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998887654
No 213
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.54 E-value=0.16 Score=51.95 Aligned_cols=158 Identities=12% Similarity=0.094 Sum_probs=95.8
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
++..+...+...+..|+++++- +|. .+..+-+.+|.+++++|-++...++.. +
T Consensus 74 G~viaa~slg~~i~~liF~~Ws----~k~------~~~k~Pli~s~ii~~~g~llY~~l~~~-----------------~ 126 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWS----NKT------GSVKKPLIVSFLIAIIGNLLYLALAYV-----------------P 126 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccc----ccc------CCcccCHHHHHHHHHHHHHHHHHHHhc-----------------c
Confidence 5666778888889999988742 221 122333788999999998887666521 2
Q ss_pred h-hHHHHHHHHHHHHhhh-hhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcC-
Q 014067 315 I-TFLWVALQYLFLGSAD-LFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFG- 391 (431)
Q Consensus 315 ~-s~~wli~~~~l~~igE-~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~- 391 (431)
. +.|+++..+++.|+|- .+..--.+.-..+-.+++.| +++.......+|..+|+.+...+..+-+. +-.|. +
T Consensus 127 ~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~r--A~a~~~~~~vlg~ilGp~~q~~f~~Lg~~--G~~i~-~~ 201 (488)
T KOG2325|consen 127 NGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPR--AFAATSGGFVLGIILGPTIQLAFTPLGEK--GFMIL-PG 201 (488)
T ss_pred cchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHH--HHHHhhhHHHHHHHHhHHHHHHHhhhcCC--ceEEc-Cc
Confidence 2 6788999999999994 44434433333334455555 45555555556666666665555444321 12344 4
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 014067 392 SNLNHYHLERFYWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 392 ~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
..+|...... |+++++.+++.++..+..|...+
T Consensus 202 ~~~n~YTap~--w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 202 LIFNMYTAPA--WLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred ceEEecchHH--HHHHHHHHHHHHHHHhheeeccc
Confidence 3455544443 55667777777777776665543
No 214
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.51 E-value=3.4 Score=42.21 Aligned_cols=160 Identities=13% Similarity=0.046 Sum_probs=95.9
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC--CCC-C
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGL--VNS-S 310 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~--~~~-~ 310 (431)
...+..++.+.+-+..-..+-.+..+.||.+ + .....-+.+|.++..++++..-+. ..++..+ .++ +
T Consensus 277 ~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir-~---fg~~~~~~~~~~~~~~~~~li~l~------~p~dap~~~t~~~~ 346 (461)
T KOG3098|consen 277 TTYLIAIYSIGIGLGEVIGGLDFSILSKRIR-G---FGRKPTVLIGIIIHLIGFLLIHLS------FPNDAPLRPTDSPP 346 (461)
T ss_pred chhHHHHHHHHHhHHHHHHHHHHHHHhhhhh-h---cccCcchhHHHHHHHHHHHHHhcc------ccccCCCCCCcccc
Confidence 3445667777777776666666666655532 1 333334666666655544432221 1111111 011 1
Q ss_pred CCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCc
Q 014067 311 EPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLF 390 (431)
Q Consensus 311 ~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~ 390 (431)
..-+.+...-...++++|++|.+.....+.++.... ++-+..+-+++-+..++++-++.......
T Consensus 347 ~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~-------------- 411 (461)
T KOG3098|consen 347 LLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL-------------- 411 (461)
T ss_pred cccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh--------------
Confidence 111233444556779999999999999999999999 55566777888888888887754443221
Q ss_pred CCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc
Q 014067 391 GSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYK 425 (431)
Q Consensus 391 ~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~ 425 (431)
.+..+.+.+.+++....+++..+.++++
T Consensus 412 -------~l~~~~l~~~i~~~i~~~~~~~~~~~~~ 439 (461)
T KOG3098|consen 412 -------LLYIYTLGLPIFCVIATTIFFIVAERTQ 439 (461)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223455666778888888888888774
No 215
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=95.46 E-value=0.11 Score=50.24 Aligned_cols=63 Identities=10% Similarity=0.031 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
-|..+.+..+++.+.|-.+..++...++.+..|++.++..+++....+++|..++|.+++.+.
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 467789999999999999999999999999999999999999999999999999999998765
No 216
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.33 E-value=0.0037 Score=65.28 Aligned_cols=143 Identities=19% Similarity=0.157 Sum_probs=3.0
Q ss_pred HHhccCCCCcccCC---CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHH-
Q 014067 221 ATMNTKLGSLKVPP---ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIK- 296 (431)
Q Consensus 221 ~~~~~~~gg~~ip~---~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~- 296 (431)
.+.++.++ ++. +++.+.+=+.-+++..++.. +..| -+.++-+++|.++++++.++.++.+-.
T Consensus 27 ttiErRF~---l~S~~~G~i~s~~di~~~~~~~~vsy----~g~~-------~hrprwig~g~~~~~~g~~l~~lPhf~~ 92 (539)
T PF03137_consen 27 TTIERRFG---LSSSQSGLISSSYDIGSLVVVLFVSY----FGGR-------GHRPRWIGIGALLMGLGSLLFALPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcC---CCHHHHHHHHHHHHHHHHHHHHHHHH----Hhhh-------cCCcceeeecHHHHHHHHHHHhccHhhc
Confidence 45555543 443 34455555555555544443 2333 245678999999999999887766521
Q ss_pred ---HHhhhhh--------cCCC------------C---C-CC-CcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCc
Q 014067 297 ---RKRVAVN--------SGLV------------N---S-SE-PLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPL 348 (431)
Q Consensus 297 ---~~~~~~~--------~g~~------------~---~-~~-~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~ 348 (431)
++..... ...- + + ++ ....-+++++...++.|+|..-.++.+.+++.+.+++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~ 172 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK 172 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence 1111000 0000 0 0 00 1123346678888999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 349 SMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 349 ~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
+..+++.|+.+....+|..+|-++++...
T Consensus 173 ~~splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 173 KNSPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp -----------------------------
T ss_pred ccCccchhhhhHHhhccHHHHHHHHHHHH
Confidence 99999999999999888877766666554
No 217
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=94.77 E-value=1.2 Score=44.33 Aligned_cols=143 Identities=12% Similarity=0.021 Sum_probs=92.4
Q ss_pred hHHHHHHhhcccchH-HHHHHHhccCCCCcccCCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHH
Q 014067 202 TIMLNCCLAQLSTFS-VQQAATMNTKLGSLKVPPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGL 280 (431)
Q Consensus 202 ~~~f~~~~~Q~~t~~-~~~~~~~~~~~gg~~ip~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~ 280 (431)
..+.|.+-++....+ +...+.+|.+ ....+..|..--....+..-..+++..+ .+..+-+.+|+
T Consensus 21 lFfl~G~~~~l~diLip~l~~~f~ls----~~~a~liqfaff~gYf~~~lpa~~~~kk-----------~gyk~gi~lgL 85 (422)
T COG0738 21 LFFLWGFITCLNDILIPHLKEVFDLT----YFEASLIQFAFFGGYFIMSLPAGLLIKK-----------LGYKAGIVLGL 85 (422)
T ss_pred HHHHHHHHhhcchhhHHHHHHHhCcc----HHHHHHHHHHHHHHHHHHhccHHHHHHH-----------hhhHHHHHHHH
Confidence 333455555555443 2223444433 1123334443333333444344444332 34445588999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHH
Q 014067 281 ILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWA 360 (431)
Q Consensus 281 ~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l 360 (431)
.+++++..+..-+.. .-++-..+...++++.|--+...++..+++.+.|++..+.=+.+...
T Consensus 86 ~l~avg~~lF~pAa~------------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~ 147 (422)
T COG0738 86 LLYAVGAALFWPAAS------------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQA 147 (422)
T ss_pred HHHHHHHHHHhhhhh------------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHH
Confidence 999988777544321 23444566778899999999999999999999999988888888888
Q ss_pred HHHHHHHHhhhhhhhhc
Q 014067 361 SLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 361 ~~~iG~~l~~~l~~~~~ 377 (431)
.+++|..+++.+++..-
T Consensus 148 fn~lGa~~gp~~g~~li 164 (422)
T COG0738 148 FNGLGAILGPLLGSSLI 164 (422)
T ss_pred hhhhHHHHHHHHHHHHH
Confidence 88999999998886654
No 218
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.67 E-value=0.0079 Score=62.84 Aligned_cols=90 Identities=10% Similarity=0.113 Sum_probs=2.7
Q ss_pred ChhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccc-------------
Q 014067 1 MLFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDN------------- 67 (431)
Q Consensus 1 ~~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~------------- 67 (431)
+|++|-++.++|...+.+--.+++=|-.++++ ..-..+++|.+..+|.++|.++++..-+.
T Consensus 143 ~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~ 216 (539)
T PF03137_consen 143 VFILGQLLIGIGATPLYTLGITYIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVG 216 (539)
T ss_dssp ---------SSS--------------------------------------------------------------------
T ss_pred HHHHHHHHHhccccCCccceeeeecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCC
Confidence 36778888889988887777776666655432 34578889999999999999998865321
Q ss_pred --------c-CchhHHHHHHHHHHHHHHHHHhcCccee
Q 014067 68 --------K-GWQWGFGISTATILLSIPIFLLGSPFYR 96 (431)
Q Consensus 68 --------~-g~~~~F~i~~i~~~i~~iif~~~~~~~~ 96 (431)
+ .|+++|.+.++..++..+-+++.-|+++
T Consensus 217 i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp 254 (539)
T PF03137_consen 217 ITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLP 254 (539)
T ss_dssp --------------------------------------
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 2 3999999999999888776665555443
No 219
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=94.56 E-value=0.38 Score=47.74 Aligned_cols=111 Identities=8% Similarity=-0.115 Sum_probs=66.4
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhh-hHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQR-IGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEP 312 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~k-i~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~ 312 (431)
.+++.++..+..++..|+.+.+.++..|+. ..+| +.++..+. +. ....
T Consensus 41 iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~--------~~~~~~~~~~~~~--~~---~~~~------------------ 89 (382)
T PRK11128 41 IGLLLGAGLVARFLGSLLIAPRVKDPSQLI--------PALRLLALLTLLF--AV---AFWF------------------ 89 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcchH--------HHHHHHHHHHHHH--HH---HHHH------------------
Confidence 355677778888888888887765544321 1112 21111111 11 1111
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 313 LPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 313 ~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
...++|.++...++.+++.....|...+.+.+. ++.++..+|......++|..+|+.+++.+.
T Consensus 90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~ 152 (382)
T PRK11128 90 GAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLV 152 (382)
T ss_pred hcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 013456666677778888877777766666654 344666677777777888888888887764
No 220
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.47 E-value=2.9 Score=36.08 Aligned_cols=62 Identities=10% Similarity=0.110 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
+.+.+++.-++.|+|+.+.+.+.-.++.+.+.++.+++..|+++.....+..+|+++.-.+.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999988888877765553
No 221
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=94.41 E-value=0.21 Score=49.18 Aligned_cols=108 Identities=16% Similarity=0.126 Sum_probs=78.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhH
Q 014067 238 PVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITF 317 (431)
Q Consensus 238 ~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~ 317 (431)
.+.-.+.=.+..|.++.+-+...|| +. +.+|.+..+++....+... +.
T Consensus 74 GSsF~ilQ~~sS~~~G~~SD~yGRk-------pv----ll~c~~~va~s~ll~~~S~---------------------~F 121 (451)
T KOG2615|consen 74 GSSFSILQFISSPLWGCLSDRYGRK-------PV----LLACLIGVALSYLLWALSR---------------------NF 121 (451)
T ss_pred hhHHHHHHHHhhhhhhhhhhhhCch-------HH----HHHHHHHHHHHHHHHHHHH---------------------HH
Confidence 3333344445666666666555443 22 4566666666666655542 33
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 014067 318 LWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNN 378 (431)
Q Consensus 318 ~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~ 378 (431)
..++.+-++.|+..-.++++ -+++.+.++++.|+..|+......++|..+||+++++...
T Consensus 122 ~afv~aR~l~Gi~kgnl~v~-rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 122 AAFVLARFLGGIFKGNLSVI-RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhhhccCchHHH-HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 45666788888888888766 4999999999999999999999999999999999998864
No 222
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=94.34 E-value=0.58 Score=46.46 Aligned_cols=60 Identities=5% Similarity=-0.207 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
++++++..+++++.+.....|...+++.+ +++.|+...|......++|..+++.+++.+.
T Consensus 93 ~~~~l~~~~~l~~~~~~~~~p~~~al~~~--~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~ 152 (382)
T TIGR00902 93 NAWLLFIAIGLFALFFSAGMPIGDALANT--WQKQFGLDYGKVRLIGSAAFIIGSALFGGLI 152 (382)
T ss_pred hHHHHHHHHHHHHHHHccchhHHHHHHHH--HHHHcCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777888888887777887777643 4577899999999999999999998887765
No 223
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=94.21 E-value=1.3 Score=45.43 Aligned_cols=58 Identities=19% Similarity=0.223 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhh
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLV 373 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~ 373 (431)
+...++..-++.|+..-+......=++.+.||++.||.+..+..+...+|..++..++
T Consensus 115 ~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~ 172 (485)
T KOG0569|consen 115 SFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLG 172 (485)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 5566888999999999999999999999999999999999999999999999986665
No 224
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=94.12 E-value=0.45 Score=47.29 Aligned_cols=87 Identities=7% Similarity=-0.039 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCc
Q 014067 317 FLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNH 396 (431)
Q Consensus 317 ~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~ 396 (431)
.+|++....+.++......+....+..+..+++.++.+.+.......+|..+|+.....+.... +|-
T Consensus 97 ~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~------gw~------- 163 (390)
T TIGR02718 97 AGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF------GQR------- 163 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CHH-------
Confidence 3455555555656666666777778888888888888888888888889888887665543211 232
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHH
Q 014067 397 YHLERFYWLMCILGGLNFLHFLFW 420 (431)
Q Consensus 397 ~~l~~~f~~la~l~~v~~i~~~~~ 420 (431)
.-|++.+++.++..+..++.
T Consensus 164 ----~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 164 ----PAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred ----HHHHHHHHHHHHHHHHHHHc
Confidence 34777777777666655444
No 225
>PRK09528 lacY galactoside permease; Reviewed
Probab=94.11 E-value=0.046 Score=55.14 Aligned_cols=79 Identities=18% Similarity=0.124 Sum_probs=55.8
Q ss_pred HHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHH-HHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHH
Q 014067 5 GLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNY-YVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILL 83 (431)
Q Consensus 5 ~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~-~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i 83 (431)
...+.+++.+...+.....+.+.++++ .+...+.. +.++.++|+.+++.++|++.+.+||+..|.+.++..++
T Consensus 321 ~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i 394 (420)
T PRK09528 321 LKLLHAFEVPFLLVGVFKYITLNFDVR------LSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLL 394 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcc------ceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHH
Confidence 344555666666666666667777543 23334433 45678899999999999999999999999988887776
Q ss_pred HHHHHH
Q 014067 84 SIPIFL 89 (431)
Q Consensus 84 ~~iif~ 89 (431)
..++.+
T Consensus 395 ~~~~~~ 400 (420)
T PRK09528 395 FTLISV 400 (420)
T ss_pred HHHHHH
Confidence 655443
No 226
>PRK09669 putative symporter YagG; Provisional
Probab=94.08 E-value=0.24 Score=50.39 Aligned_cols=115 Identities=10% Similarity=-0.017 Sum_probs=68.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhH
Q 014067 238 PVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITF 317 (431)
Q Consensus 238 ~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~ 317 (431)
..+.-++-.+..|+.+.+.++...|.+++ ..-+..|.+..++++..+.... +.+ .....
T Consensus 51 ~~i~~i~dai~dp~~G~lsD~~~~r~Grr------rp~il~~~~~~~i~~~l~f~~p--------~~~-------~~~~~ 109 (444)
T PRK09669 51 FLVVRVLDAVTDPLMGALVDRTRTRHGQF------RPYLLWFAIPFGVVCLLTFYTP--------DFG-------ATGKI 109 (444)
T ss_pred HHHHHHHHHcccceeeEeeecCCCCCCCc------chhHHHHHHHHHHHHHHHHhCC--------CCC-------cchHH
Confidence 33334444455555555555433332221 1125566666666655433321 000 12456
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhccc-CchhhhHHHHHHHHHHHHHHHHhhhhh
Q 014067 318 LWVALQYLFLGSADLFTLAGMMEFFFTDA-PLSMRSLATSLSWASLAMGYYFSTVLV 373 (431)
Q Consensus 318 ~wli~~~~l~~igE~~~~~~~~~~~~~~a-P~~~~g~~~gl~~l~~~iG~~l~~~l~ 373 (431)
+|....|++.+++-.+..+.-.+...+.+ +++.|+...+.-.....+|..+++.+.
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~ 166 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIA 166 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888777777777778888887 447788888887777777777776544
No 227
>PRK11462 putative transporter; Provisional
Probab=94.04 E-value=1.2 Score=45.75 Aligned_cols=84 Identities=14% Similarity=0.042 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccC-chhhhHH
Q 014067 276 IGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAP-LSMRSLA 354 (431)
Q Consensus 276 i~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP-~~~~g~~ 354 (431)
+.+|.+..++++..+.... +.+ ......|....|++..++-.+....-.++...+++ ++.|+..
T Consensus 83 il~g~i~~~i~~~llf~~p--------~~s-------~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l 147 (460)
T PRK11462 83 VLFGALPFGIVCVLAYSTP--------DLS-------MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISL 147 (460)
T ss_pred HhHHHHHHHHHHHHHHhCC--------CCC-------cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHH
Confidence 5567777777765544321 000 11236788999999999999999999999999999 6899999
Q ss_pred HHHHHHHHHHHHHHhhhhhh
Q 014067 355 TSLSWASLAMGYYFSTVLVS 374 (431)
Q Consensus 355 ~gl~~l~~~iG~~l~~~l~~ 374 (431)
++.-.....+|..+++.+..
T Consensus 148 ~s~r~~~~~iG~~~~~~~~~ 167 (460)
T PRK11462 148 QSWRFVLATAGGMLSTVLMM 167 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999888888877766643
No 228
>PTZ00207 hypothetical protein; Provisional
Probab=94.00 E-value=9.8 Score=40.36 Aligned_cols=76 Identities=13% Similarity=-0.020 Sum_probs=56.1
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHH-HhhhhhhcccccCchhHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALI-AVTFVVWIEDNKGWQWGFGISTAT 80 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i-~~~~~~~l~~~~g~~~~F~i~~i~ 80 (431)
+++...+.++|.+.+.+.......++|++ +|..+.++...+.++|+++ +++..+++.+ +|+..|.+.++.
T Consensus 123 l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~-------~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl 193 (591)
T PTZ00207 123 LSVYNGLMTLGCMLFDLGAVVTVLSVFPS-------NRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSF 193 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChh-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHH
Confidence 35566778889988888888889999852 3577899999999999975 6666666654 567777766665
Q ss_pred HHHHHH
Q 014067 81 ILLSIP 86 (431)
Q Consensus 81 ~~i~~i 86 (431)
.++..+
T Consensus 194 ~~vv~l 199 (591)
T PTZ00207 194 ALVVGI 199 (591)
T ss_pred HHHHHH
Confidence 555444
No 229
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=93.25 E-value=0.18 Score=52.00 Aligned_cols=83 Identities=16% Similarity=0.297 Sum_probs=70.6
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccC-chhHHHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKG-WQWGFGISTAT 80 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g-~~~~F~i~~i~ 80 (431)
||+.-+++++..|...+..-++.++..|+++ ...+|++|-......+.+||++.+.+.+..| .+.+|....+.
T Consensus 383 f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~l 456 (477)
T PF11700_consen 383 FWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVL 456 (477)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 3455567899999999999999999998763 4679999999999999999999999988665 88999888888
Q ss_pred HHHHHHHHHh
Q 014067 81 ILLSIPIFLL 90 (431)
Q Consensus 81 ~~i~~iif~~ 90 (431)
++++++++..
T Consensus 457 f~~gl~ll~~ 466 (477)
T PF11700_consen 457 FLIGLILLFF 466 (477)
T ss_pred HHHHHHHHhh
Confidence 8888876643
No 230
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=93.25 E-value=1.6 Score=43.60 Aligned_cols=118 Identities=14% Similarity=0.030 Sum_probs=76.9
Q ss_pred cCCCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 014067 232 VPPASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSE 311 (431)
Q Consensus 232 ip~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 311 (431)
+++++...+..+.++..+.+ -...-++.+|. .+.+-..+++++..+-.+..++...
T Consensus 46 LS~~q~~ll~aiPil~Gall-Rl~~g~l~drf-------GgR~~~~~s~~l~~IP~~~~~~a~~---------------- 101 (417)
T COG2223 46 LSEGQKGLLVAIPILVGALL-RLPYGFLTDRF-------GGRKWTILSMLLLLIPCLGLAFAVT---------------- 101 (417)
T ss_pred CCHHHHHHHHHHHHHHhHHH-HHHHHhhhccc-------CchHHHHHHHHHHHHHHHHHHHHcc----------------
Confidence 66777666666666655443 22233444553 3445566777877887777777641
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 312 PLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 312 ~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
..|.|+++..=++.|++-.- ...++..+.+-=||+.||.++|++. ..++|..+...+...+.
T Consensus 102 --~~~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~ 163 (417)
T COG2223 102 --YPSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVA 163 (417)
T ss_pred --CCchHHHHHHHHHHhcccce-ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHH
Confidence 23445566666677776533 3566788999999999999999998 66666666665555554
No 231
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=93.19 E-value=0.00023 Score=72.45 Aligned_cols=79 Identities=19% Similarity=0.271 Sum_probs=58.8
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhccc---ccCchhHHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIED---NKGWQWGFGIST 78 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~---~~g~~~~F~i~~ 78 (431)
+.++..+.++|.|+.-+....++.+..+++ +|.....+...+.++|.+++..++-.+.+ +.+|+..+.+++
T Consensus 105 ~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~------~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~ 178 (451)
T PF00083_consen 105 LLIGRFLIGFGIGGAYVVSPIYISEIAPPK------HRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGA 178 (451)
T ss_pred cccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccc
Confidence 466788999999999999999998887644 35556677778888998888776654433 346999988877
Q ss_pred HHHHHHHH
Q 014067 79 ATILLSIP 86 (431)
Q Consensus 79 i~~~i~~i 86 (431)
+..++.++
T Consensus 179 ~~~l~~~~ 186 (451)
T PF00083_consen 179 IPSLLVLL 186 (451)
T ss_pred cccccccc
Confidence 76655433
No 232
>PF13347 MFS_2: MFS/sugar transport protein
Probab=92.98 E-value=0.42 Score=48.32 Aligned_cols=125 Identities=18% Similarity=0.270 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-hhhhHH
Q 014067 276 IGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPL-SMRSLA 354 (431)
Q Consensus 276 i~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~-~~~g~~ 354 (431)
+.+|.++.++++..+....- .+ ........|+...|++..++--+....-.++..+.+|+ +.|...
T Consensus 75 ~l~g~i~~~~~~~llf~~~p--------~~-----~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l 141 (428)
T PF13347_consen 75 ILIGAILLALSFFLLFSPPP--------AG-----LSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRL 141 (428)
T ss_pred eehhhHHHHHHHHHhhcccc--------ch-----hhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhH
Confidence 66788888888877665410 00 00124667889999999999999999999999999995 689999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhc
Q 014067 355 TSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAAR 423 (431)
Q Consensus 355 ~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~ 423 (431)
.+.-.+...+|+.+.+.+...+.. |+ .++-+........++.+++.++..++..+..|.
T Consensus 142 ~~~~~~~~~~g~~l~~~~~~~l~~---------~~-g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 142 SSWRMIFSMIGSLLASFLAPILVS---------WF-GGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhh---------hh-ccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 998888888888766655554432 22 111000022244555666666666655555555
No 233
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=92.55 E-value=1.4 Score=45.82 Aligned_cols=84 Identities=15% Similarity=0.220 Sum_probs=65.1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNL 394 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~ 394 (431)
-|+++++..-++.|++..-....+...+.+..+++.|+.++.+ ......+..+++.++.++. .+|=
T Consensus 169 ~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~--------~~Wr----- 234 (521)
T KOG0255|consen 169 PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYIT--------RDWR----- 234 (521)
T ss_pred CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHH--------hhHH-----
Confidence 4678889999999999999999999999999999999999999 6666666666666666654 2453
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHH
Q 014067 395 NHYHLERFYWLMCILGGLNFLHFL 418 (431)
Q Consensus 395 n~~~l~~~f~~la~l~~v~~i~~~ 418 (431)
++++..++.+++..++++
T Consensus 235 ------~~~~~~~~~~~~~~~~~~ 252 (521)
T KOG0255|consen 235 ------WLFWIISIPSGLFLLLWF 252 (521)
T ss_pred ------HHHHHHHHHHHHHHHHHH
Confidence 556766666666655533
No 234
>PRK10429 melibiose:sodium symporter; Provisional
Probab=92.24 E-value=1.1 Score=46.17 Aligned_cols=116 Identities=11% Similarity=0.068 Sum_probs=71.3
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchh
Q 014067 237 LPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPIT 316 (431)
Q Consensus 237 l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s 316 (431)
+..+..++-.+..|+.+.+.++...|.+++ . .-+.+|.+..++++..+.... + . .....
T Consensus 47 i~~i~ri~dai~dp~~G~lsD~t~sr~Grr----r--p~il~g~i~~~i~~~llf~~p----------~---~--~~~~~ 105 (473)
T PRK10429 47 LFLVARIWDAINDPIMGWIVNNTRSRWGKF----K--PWILIGTLANSVVLFLLFSAH----------L---F--EGTAQ 105 (473)
T ss_pred HHHHHHHHHHHhhchheeehhcCCCCCCCc----c--hhHhhhhHHHHHHHHHHHcCC----------C---C--CccHH
Confidence 344444444555555555554332222211 1 125667777777765543221 0 0 01234
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhccc-CchhhhHHHHHHHHHHHHHHHHhhhhh
Q 014067 317 FLWVALQYLFLGSADLFTLAGMMEFFFTDA-PLSMRSLATSLSWASLAMGYYFSTVLV 373 (431)
Q Consensus 317 ~~wli~~~~l~~igE~~~~~~~~~~~~~~a-P~~~~g~~~gl~~l~~~iG~~l~~~l~ 373 (431)
.+|.+..|++..++--+..+.-.++..+++ +++.|+...+.-.....+|+.+.+.+.
T Consensus 106 ~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~ 163 (473)
T PRK10429 106 YVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFT 163 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678888999999998888899999999999 588999988875666666666655443
No 235
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=91.81 E-value=0.44 Score=48.72 Aligned_cols=60 Identities=7% Similarity=0.002 Sum_probs=50.5
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhcccc
Q 014067 321 ALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNIT 380 (431)
Q Consensus 321 i~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~ 380 (431)
+-.-++.|++--+++....+..+++.-+..+|+++|++....+++..+++.+........
T Consensus 392 ~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~ 451 (488)
T KOG2325|consen 392 ISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS 451 (488)
T ss_pred eehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc
Confidence 334457778887888889999999999999999999999999999999998887665433
No 236
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=91.49 E-value=5.6 Score=40.84 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=70.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHH
Q 014067 240 FPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLW 319 (431)
Q Consensus 240 ~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~w 319 (431)
.-++..++..|+++.+.+++.|| .++..-..|.++-.+..++ ..||
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk--------~~L~~~~~~~~l~~~~~~~--------------------------~~~~ 115 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRK--------VVLLLPLFGTILPALCLLF--------------------------QGYW 115 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhh--------hhHHHHHHHHHHhHHHHHH--------------------------HHHH
Confidence 34677888999999998888776 3333333444443333222 1245
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 320 VALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 320 li~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+. ..=..-+-..+...+.+++++.+..+.|....|+...+.+.+..+++.+++...
T Consensus 116 ~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~ 172 (463)
T KOG2816|consen 116 FFL-LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLV 172 (463)
T ss_pred Hhh-hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 544 111122333456778899999999999999999999999999999998887764
No 237
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.37 E-value=0.64 Score=44.13 Aligned_cols=77 Identities=17% Similarity=0.161 Sum_probs=58.5
Q ss_pred hHHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccC---chhHHHHHHH
Q 014067 3 FAGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKG---WQWGFGISTA 79 (431)
Q Consensus 3 ~~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g---~~~~F~i~~i 79 (431)
|+++.+.++...+.--+.-++++...+++ +...+|...|...|+|-.+.|++++.+.++-| |--+|.+...
T Consensus 356 y~~m~~lGLsysllAcslWP~va~~vpE~------qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 356 YTSMTFLGLSYSLLACSLWPCVASLVPEE------QLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred HHHHHHHhhhHHHHHHHHhhhhhhhCCHH------HhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHH
Confidence 56777788877776666778888888755 46789999999999999999999999988644 5555655555
Q ss_pred HHHHHH
Q 014067 80 TILLSI 85 (431)
Q Consensus 80 ~~~i~~ 85 (431)
.|.+..
T Consensus 430 ~~aL~s 435 (459)
T KOG4686|consen 430 LMALTS 435 (459)
T ss_pred HHHHHH
Confidence 555443
No 238
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=89.28 E-value=3.1 Score=42.54 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=71.8
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-hhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCC
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPL-SMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGS 392 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~-~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~ 392 (431)
..+..|....|.+++++--++...--++...++++ +.|....+..+...++|+.+...+...+...-+ ++
T Consensus 109 ~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g---------~~ 179 (467)
T COG2211 109 TGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFG---------GG 179 (467)
T ss_pred CcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CC
Confidence 36778888999999999999998888998888886 788999999999999998888777655442222 11
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 014067 393 NLNHYHLERFYWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 393 ~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
| +..-|+.....++++..+.++++.+.-|-
T Consensus 180 ~----~~~g~~~~~~~~~vi~~i~~l~~~~~v~E 209 (467)
T COG2211 180 D----KALGYQGTALVLGVIGVILLLFCFFNVKE 209 (467)
T ss_pred c----chhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1 11234555555666666666666655543
No 239
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=88.66 E-value=4.7 Score=40.99 Aligned_cols=84 Identities=17% Similarity=0.167 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcc---cCchhhh
Q 014067 276 IGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTD---APLSMRS 352 (431)
Q Consensus 276 i~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~---aP~~~~g 352 (431)
+.+|.++.+++...++.... ...+........++.++|..+.....-+.+.+. -|++ +|
T Consensus 62 ~~i~~~~~~~~~~~~~~~~~-----------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g 123 (433)
T PF03092_consen 62 MIIGWLLGAVSALVLALLPA-----------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RG 123 (433)
T ss_pred HHHHHHHHHHHHHHHHhccc-----------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hH
Confidence 66777777666655555421 012222333344555555555555544444433 3555 88
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 353 LATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 353 ~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
..++..+....+|+.++..+++...
T Consensus 124 ~lqS~~~~~~~~G~lv~~~l~G~l~ 148 (433)
T PF03092_consen 124 DLQSFVWGVRSVGSLVGSLLSGPLL 148 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 8999988889999999988876654
No 240
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=88.26 E-value=12 Score=35.06 Aligned_cols=122 Identities=13% Similarity=0.139 Sum_probs=76.4
Q ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchh
Q 014067 271 THLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSM 350 (431)
Q Consensus 271 s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~ 350 (431)
.|..-..+|.++..+++....+.-. +. ....+.|.+.....+.+.|.....-....-..+.-|+ .
T Consensus 64 gp~~~l~iG~~~~~~GY~~~~l~~~---------~~-----i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~ 128 (250)
T PF06813_consen 64 GPWVVLLIGAVLGFVGYGLLWLAVS---------GR-----IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S 128 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHh---------Cc-----cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c
Confidence 3444567888888888877666531 10 0124555555555666677766655555555567775 7
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccc
Q 014067 351 RSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYK 425 (431)
Q Consensus 351 ~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~ 425 (431)
||.+.|+---..++++.+=..+...+. ++ +.+.|+++++....+..++.....|..+
T Consensus 129 RG~vvgilk~~~GLSaai~t~i~~~~f-------------~~-----~~~~fll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 129 RGTVVGILKGFFGLSAAIFTQIYSAFF-------------GD-----DPSSFLLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred cCceehhhhHHHHhHHHHHHHHHHHHc-------------CC-----ChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence 999999999888888877555544332 22 2235667777766666555655666664
No 241
>PRK09848 glucuronide transporter; Provisional
Probab=88.05 E-value=5.2 Score=40.56 Aligned_cols=109 Identities=9% Similarity=0.006 Sum_probs=60.0
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+.+.....+...+..|+.+++.++..+|.+++ .+ -+.+|.+..+++...+.... .+. ...
T Consensus 47 g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~----~~--~~~~~~~~~~~~~~~~~~~~---------~~~-----~~~ 106 (448)
T PRK09848 47 GTMLLLVRVFDAFADVFAGRVVDSVNTRWGKF----RP--FLLFGTAPLMIFSVLVFWVP---------TDW-----SHS 106 (448)
T ss_pred HHHHHHHHHHHHHhhhhheeeeecCCCCCcCc----hH--HHHHHHHHHHHHHHHHHhCc---------CCC-----Ccc
Confidence 44556666677777777777766554332221 11 12344443433332221111 000 012
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-hhhhHHHHHHHHHHH
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPL-SMRSLATSLSWASLA 363 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~-~~~g~~~gl~~l~~~ 363 (431)
...+|....+++.+++..+..+...+....++++ +.|+...+.-....+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~ 156 (448)
T PRK09848 107 SKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAAS 156 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHH
Confidence 3567778888888988888887777777766655 557777665544333
No 242
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=87.67 E-value=15 Score=36.27 Aligned_cols=139 Identities=20% Similarity=0.209 Sum_probs=90.1
Q ss_pred CcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcch
Q 014067 236 SLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPI 315 (431)
Q Consensus 236 ~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 315 (431)
.+.+++-+..=++.|+.. ++.|| .++.+-+..++++.+++..+ |. -.
T Consensus 51 lLTtLPll~fg~~ap~a~----~Lar~-------~g~er~l~~~Llli~~G~~i-------R~---------------~~ 97 (395)
T COG2807 51 LLTTLPLLAFGLFAPAAP----RLARR-------FGEERSLFLALLLIAAGILI-------RS---------------LG 97 (395)
T ss_pred HHHHHHHHHHHHHHhhhH----HHHHH-------HhhHHHHHHHHHHHHHHHHH-------Hh---------------cc
Confidence 344444444444444443 34455 45666677777776655443 21 12
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCC
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLN 395 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n 395 (431)
+.+-+...-++.+.|-....+-..+.+-+.-|++. +.+||+|..+.++|..+++.+...+.... .+|-
T Consensus 98 ~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-~~mtglYs~sl~~~aaLaa~lavpla~~~-----~gW~------ 165 (395)
T COG2807 98 GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-GLMTGLYSTSLGAGAALAAALAVPLAQHS-----GGWR------ 165 (395)
T ss_pred cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-hhHHhHHHHHHHHHHHHHhhhhhHHHHhh-----ccHH------
Confidence 44556777788888888888888899999988875 58999999999999999988876654222 2353
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhcc
Q 014067 396 HYHLERFYWLMCILGGLNFLHFLFWAARY 424 (431)
Q Consensus 396 ~~~l~~~f~~la~l~~v~~i~~~~~~~~~ 424 (431)
.-....+..+++++++++-...|+
T Consensus 166 -----~aL~~WAl~allAl~~WlPq~~r~ 189 (395)
T COG2807 166 -----GALGFWALLALLALLIWLPQALRE 189 (395)
T ss_pred -----HHHHHHHHHHHHHHHHHhhhcccc
Confidence 123445667777777777664443
No 243
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=87.41 E-value=10 Score=38.61 Aligned_cols=123 Identities=10% Similarity=0.140 Sum_probs=71.1
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCch
Q 014067 270 ITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLS 349 (431)
Q Consensus 270 ~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~ 349 (431)
.+...|+..++++..+.++.....-. + + . ......+..+..-++.+++..+...+.+.++...-|+
T Consensus 72 i~~~~Ri~~~lv~~~~~~~~~~~l~~-~-------~---~--~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~~fp~~- 137 (437)
T TIGR00939 72 IPVTVRLLGGLVILLVVVILVMVLVK-V-------Q---T--SETGFFVTTMASVVIINSGMALLQGSLFGLAGVFPST- 137 (437)
T ss_pred cCccchhHHHHHHHHHHHHHHhheee-e-------c---C--CcchHHHHHHHHHHHHHhhhhhhcccchhhcccCCHH-
Confidence 56667888887765555544333210 0 0 0 0113455556666788999999888888888865543
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCC--CCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 014067 350 MRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSN--LNHYHLERFYWLMCILGGLNFLHFLFWA 421 (431)
Q Consensus 350 ~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~--~n~~~l~~~f~~la~l~~v~~i~~~~~~ 421 (431)
+++.+....++++.++..+--+.. ... +|+ .+.+. ..||.+-+++.+++.+.|..+.
T Consensus 138 ----~~~a~~~G~g~aGv~~s~~~ii~~-a~~---------~~~~~~~~~a-~~YF~~a~~v~l~~i~~~~~l~ 196 (437)
T TIGR00939 138 ----YSSAVMSGQGLAGVLTSLAMILVK-ASG---------NDSHGLKKSA-LGYFGTPCVVQLICIVCYLLLP 196 (437)
T ss_pred ----HHHHHHhcchhHHHHHHHHHHHHH-Hhc---------CCccchhhhh-hhHHHHHHHHHHHHHHHHHHHh
Confidence 444555557777776655533222 111 221 22222 2467777777888888877654
No 244
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=87.12 E-value=4.6 Score=42.00 Aligned_cols=139 Identities=11% Similarity=0.044 Sum_probs=94.8
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCc
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPL 313 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 313 (431)
.+|..++......+..|+...+. +|.+ -..-+.+|-++++++++...+..
T Consensus 83 ~~~i~sl~~~~~~~~gpl~s~l~----~rfg-------~R~v~i~G~~v~~~g~~lssF~~------------------- 132 (509)
T KOG2504|consen 83 IAWIGSLLLGVYLLAGPLVSALC----NRFG-------CRTVMIAGGLVAALGLLLSSFAT------------------- 132 (509)
T ss_pred HHHHHHHHHHHHHHhccHHHHHH----hhcC-------chHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 46777787777777788877654 5532 22457789999999999988873
Q ss_pred chhHHHH-HHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCC
Q 014067 314 PITFLWV-ALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGS 392 (431)
Q Consensus 314 ~~s~~wl-i~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~ 392 (431)
++|.+ +-.-++.|+|--+++......+. .=.++.|++++|+-....++|..+=+.+....-.. .+|-
T Consensus 133 --~i~~l~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~------~G~r--- 200 (509)
T KOG2504|consen 133 --SLWQLYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSK------YGWR--- 200 (509)
T ss_pred --hHHHHHHHHHHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHH------hCcH---
Confidence 44444 34556778888888777666665 45678899999999999999888777666554311 1342
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHhhc
Q 014067 393 NLNHYHLERFYWLMCILGGLNFLHFLFWAAR 423 (431)
Q Consensus 393 ~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~ 423 (431)
+-.+.++.++ ++.+++.+..|+
T Consensus 201 --------~~~l~~~~~~-l~~~~~~~~~rp 222 (509)
T KOG2504|consen 201 --------GALLIFGGIS-LNVLVAGALLRP 222 (509)
T ss_pred --------HHHHHHHHHH-HHHHHHHHHcCC
Confidence 2345555555 555556665555
No 245
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=86.91 E-value=35 Score=34.06 Aligned_cols=54 Identities=15% Similarity=0.116 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 319 WVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 319 wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
|+...-++++.+- -..+.+.-+.=|...|++..|.-..+.-+|.+++|++. ...
T Consensus 440 llf~arafisg~f----qvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~ 493 (528)
T KOG0253|consen 440 LLFTARAFISGAF----QVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRA 493 (528)
T ss_pred HHHHHHHHHhchh----eEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHh
Confidence 5555555555544 33444555566789999999999999999999999887 443
No 246
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=86.12 E-value=3.6 Score=41.68 Aligned_cols=163 Identities=15% Similarity=0.083 Sum_probs=104.8
Q ss_pred HHHHhHHHHHhhhHHHHHHhhcccchHHHHHHHhccCCCCcccCC---CCcCchhHHHHHHHHHHHHHHHHHHhhhccCC
Q 014067 190 KIVVKIFPIFMSTIMLNCCLAQLSTFSVQQAATMNTKLGSLKVPP---ASLPVFPVIFILILAPVYNHVIIPFARKVTKT 266 (431)
Q Consensus 190 k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~~~~~~~~~~gg~~ip~---~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~ 266 (431)
+++++...+.+..=+.|....+..|-+++ .+| +|- +..+..-|+.-++.+|+.+...++.-.|.++|
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-------~lG---vphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRR 101 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-------SLG---VPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRR 101 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-------HcC---CCcccccccccccccccceecccccccccccccccccc
Confidence 45555556666677778877766655543 223 443 34567788999999999999888877776543
Q ss_pred CCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC-C-CcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q 014067 267 EMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSS-E-PLPITFLWVALQYLFLGSADLFTLAGMMEFFFT 344 (431)
Q Consensus 267 ~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~-~-~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~ 344 (431)
+| =|.+|.++.++++...+...-.-+... |++ . ..+-++...+..+.++-++--.+.-..=++..+
T Consensus 102 ----RP--fI~~~s~~i~~~l~Lig~aaDig~~lg------d~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~D 169 (498)
T KOG0637|consen 102 ----RP--FILAGSLLIAVSLFLIGYAADIGLLLG------DNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLAD 169 (498)
T ss_pred ----cc--hHHHhhHHHHHHHhhhhhHhhhhHHhc------CCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHH
Confidence 12 166777777777776665542111111 111 1 223555566667777777775555445577777
Q ss_pred ccCchhhhH-HHHHHHHHHHHHHHHhhhhhh
Q 014067 345 DAPLSMRSL-ATSLSWASLAMGYYFSTVLVS 374 (431)
Q Consensus 345 ~aP~~~~g~-~~gl~~l~~~iG~~l~~~l~~ 374 (431)
++-...|-. ..+.+.+..++||.+|-.+++
T Consensus 170 l~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 170 LARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 765555555 999999999999999876665
No 247
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=84.39 E-value=1.4 Score=44.30 Aligned_cols=78 Identities=17% Similarity=0.168 Sum_probs=55.7
Q ss_pred HHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHH-HHHHHHHhhhhhhcccccC------chhHHHHHHHHH
Q 014067 9 VALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCL-SCGALIAVTFVVWIEDNKG------WQWGFGISTATI 81 (431)
Q Consensus 9 i~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~i-NiG~~i~~~~~~~l~~~~g------~~~~F~i~~i~~ 81 (431)
=++..|.+......++.+..+++. |.++=+++.... -+|..+|..++|++.|++| |...|.++++..
T Consensus 311 hG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~ 384 (400)
T PF03825_consen 311 HGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMA 384 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHH
Confidence 466677788888888888887653 344555545443 4899999999999998766 445667777777
Q ss_pred HHHHHHHHhcC
Q 014067 82 LLSIPIFLLGS 92 (431)
Q Consensus 82 ~i~~iif~~~~ 92 (431)
++..++|.+..
T Consensus 385 ~~~~~~f~~~f 395 (400)
T PF03825_consen 385 LVILVLFVILF 395 (400)
T ss_pred HHHHHHHHhhc
Confidence 77777776543
No 248
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=82.91 E-value=61 Score=33.40 Aligned_cols=52 Identities=10% Similarity=0.028 Sum_probs=37.6
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHH-HHHHHhhhhh
Q 014067 322 LQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLA-MGYYFSTVLV 373 (431)
Q Consensus 322 ~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~-iG~~l~~~l~ 373 (431)
.+.++.-.++--..-..-|+++...+++.|...-+..=...+ +|-.+|+.+.
T Consensus 381 ~~~v~~k~~kYsl~dp~kEmly~pld~e~K~K~Ka~iD~v~~r~Gks~gs~i~ 433 (472)
T TIGR00769 381 IQNILSKSTKYSLFDATKEMAYIPLDEEQKVKGKAAIDVVAARLGKSGGALIQ 433 (472)
T ss_pred HHHHHHHHhhhccccHHHHHhcccCCHHHHHHhHhhhhhhhhhhhhHHHHHHH
Confidence 377777777777777778999999999999888776655443 5555554443
No 249
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=82.33 E-value=24 Score=36.17 Aligned_cols=58 Identities=16% Similarity=0.064 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhH---HHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 319 WVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSL---ATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 319 wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~---~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
+.+...++.+++.....+..-++..+..| +.++. .+...+...++|..+|+.+++...
T Consensus 122 ~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 122 VAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 33345778888888888888888888887 43333 444444445678888877777654
No 250
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=79.60 E-value=5 Score=41.11 Aligned_cols=118 Identities=12% Similarity=0.038 Sum_probs=84.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchh--
Q 014067 273 LQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSM-- 350 (431)
Q Consensus 273 ~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~-- 350 (431)
.+-+.+|-++.+++-++++..+ ..+...+....+++++|--++-|...++..++=|++-
T Consensus 92 ~~tI~lGail~~iGh~~L~~~~-------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr 152 (498)
T COG3104 92 RRTIVLGAILMAIGHLVLAISS-------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR 152 (498)
T ss_pred hHHHHHHHHHHHHHHHHHhccc-------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc
Confidence 3558899999999988877752 0223356667778888988888888888887766532
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 014067 351 RSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 351 ~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
|-...++++...++|+++++.+.+++.. |+ + ...-|.+.++-+..+++.|++..|+++-
T Consensus 153 rD~gFt~fY~~iNiGsl~~p~i~~~~~~---------~~-----g---~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 153 RDGGFTLFYMGINIGSLIAPIITGLLAI---------NY-----G---WHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred cCCCccEEEEEeehHHHHHHHHHHHHHH---------hh-----C---HHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 4446677777888999999999888752 22 1 1234777777777888888888877754
No 251
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=77.61 E-value=0.022 Score=57.92 Aligned_cols=61 Identities=18% Similarity=0.148 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
+++++....++.|++--...+....++.+.+|++.||.+.+++.....+|..++..+...+
T Consensus 101 ~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~ 161 (451)
T PF00083_consen 101 NFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV 161 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6778888899999999899999999999999999999999999999999999887776544
No 252
>PF01891 CbiM: Cobalt uptake substrate-specific transmembrane region; InterPro: IPR002751 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the integral membrane protein CbiM, which is involved in cobalamin synthesis, although its exact function in unknown.; GO: 0009236 cobalamin biosynthetic process, 0016021 integral to membrane
Probab=76.58 E-value=39 Score=30.43 Aligned_cols=100 Identities=12% Similarity=0.077 Sum_probs=59.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhH
Q 014067 238 PVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITF 317 (431)
Q Consensus 238 ~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~ 317 (431)
.-.|.+...+..++..+..++..+|+ .+..++..+++-..++....+.............+ +......+
T Consensus 105 lG~N~l~m~~~~~~~~~~~~~~l~~~-------~~~~~~~~~F~ag~l~~~~~~~~~~~~l~l~~~~~----~~~~~~~~ 173 (205)
T PF01891_consen 105 LGANALNMGVPPVLVSYLLFRLLRRK-------FPRNIFVAGFLAGFLSVLLAALAVSLVLGLSGTAG----DYPWMALV 173 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc----cccHHHHH
Confidence 34677777777777788777766652 23344555555455555444443322221111100 00123444
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCc
Q 014067 318 LWVALQYLFLGSADLFTLAGMMEFFFTDAPL 348 (431)
Q Consensus 318 ~wli~~~~l~~igE~~~~~~~~~~~~~~aP~ 348 (431)
....+.+.++++.|.++......+..+.-|+
T Consensus 174 ~~~~~~~~~l~~~Eg~ltg~~v~~l~~~rP~ 204 (205)
T PF01891_consen 174 QAYLPSHLLLAFPEGFLTGMVVTFLVVYRPE 204 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5677889999999999998888888887775
No 253
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=76.17 E-value=8.6 Score=39.17 Aligned_cols=149 Identities=17% Similarity=0.207 Sum_probs=96.1
Q ss_pred cCCCCcCchhHHH---HHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 014067 232 VPPASLPVFPVIF---ILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVN 308 (431)
Q Consensus 232 ip~~~l~~~n~~~---iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~ 308 (431)
.|+...+.+|..+ .+..+.+++++=+++.||+ -++.-++++.+|-++.++.. +
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~-----------vYG~~liImIi~t~~~~~s~----------~--- 136 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK-----------VYGKELIIMIICSALSGLSV----------G--- 136 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh-----------hhhHHHHHHHHHHHHhccCC----------C---
Confidence 6887777777665 4577777887766666552 23444455554444333321 1
Q ss_pred CCCCcchh-HHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCC
Q 014067 309 SSEPLPIT-FLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTP 387 (431)
Q Consensus 309 ~~~~~~~s-~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~ 387 (431)
...+.+ .+|+...-+++|+|---=+|.+-...++.|-++-||..+++.+.+++.|-..|+.+.-++.......
T Consensus 137 --~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~---- 210 (538)
T KOG0252|consen 137 --TTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKI---- 210 (538)
T ss_pred --CCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhcc----
Confidence 112323 3578888899999988888999999999999999999999999999999888887766655433210
Q ss_pred CCcCCCCCcchhhHHHHHHHHHHHH
Q 014067 388 WLFGSNLNHYHLERFYWLMCILGGL 412 (431)
Q Consensus 388 w~~~~~~n~~~l~~~f~~la~l~~v 412 (431)
+ ++.-...|+|..|=+.-.++++
T Consensus 211 -~-~~~~~~~~ld~vWRl~~glg~v 233 (538)
T KOG0252|consen 211 -F-NGPSTYPHLDGVWRIIFGLGAV 233 (538)
T ss_pred -C-CCCCCchHHHHHHHHHHHHHHH
Confidence 1 1111123677776544444433
No 254
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=72.96 E-value=9.8 Score=37.87 Aligned_cols=108 Identities=17% Similarity=0.164 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHH-hhhhhhhhccccccCCCCCCCcCCC---
Q 014067 318 LWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYF-STVLVSIVNNITSTYRHTPWLFGSN--- 393 (431)
Q Consensus 318 ~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l-~~~l~~~~~~~~~~~~~~~w~~~~~--- 393 (431)
...+.+|.+.+..---...++++|.++.||+...|++|.+.+-...+|... +-....+++..|-+. ... +.|
T Consensus 370 il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~---C~~-~t~~~~ 445 (510)
T KOG3574|consen 370 ILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQ---CVL-ATNKVT 445 (510)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceee---ccc-ccccee
Confidence 345567888888888888999999999999999999999988877776554 334445555444210 011 101
Q ss_pred ------------CCc---chhhHHHHHHHHHHHHHHHHHHHHhhccccccC
Q 014067 394 ------------LNH---YHLERFYWLMCILGGLNFLHFLFWAARYKYSST 429 (431)
Q Consensus 394 ------------~n~---~~l~~~f~~la~l~~v~~i~~~~~~~~~~~~~~ 429 (431)
+.. ...|.||..-.+-.+++.+.+.++-++.++-+.
T Consensus 446 c~~~~~~~~c~~l~gtc~~~~DGYyi~s~ici~ig~i~~~~~~~ki~~Lq~ 496 (510)
T KOG3574|consen 446 CITKAFPQLCLALGGTCLIARDGYYITSIICIVIGFIWFGLLKPKIKYLQK 496 (510)
T ss_pred eecchHHHHHHHhcCEEEEEecceEEeeehhhhHHHHHHHHHHHHHHHHHh
Confidence 000 013456665555555666777777777766443
No 255
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=72.57 E-value=52 Score=33.57 Aligned_cols=57 Identities=19% Similarity=0.113 Sum_probs=35.4
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 320 VALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 320 li~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
....-.+.+.+|.++...-.-....--|++.|+.+..+-.+.+-+|-.++-++-.++
T Consensus 143 ~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 143 THTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred hHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcccee
Confidence 344557778888777544335556667889998877766655545555544444433
No 256
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=69.73 E-value=1.4e+02 Score=30.78 Aligned_cols=43 Identities=9% Similarity=-0.047 Sum_probs=38.6
Q ss_pred hhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 014067 336 AGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNN 378 (431)
Q Consensus 336 ~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~ 378 (431)
-.-++++.+....+...+..++..+..++|..+|+.+...+..
T Consensus 148 ~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 148 LLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999988877653
No 257
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=69.46 E-value=5.7 Score=39.85 Aligned_cols=80 Identities=16% Similarity=0.176 Sum_probs=64.3
Q ss_pred HHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccc-cCchhHHHHHHHHHHH
Q 014067 5 GLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDN-KGWQWGFGISTATILL 83 (431)
Q Consensus 5 ~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~-~g~~~~F~i~~i~~~i 83 (431)
.=.++++..|+..+..-+..++..++++ -.++|++|-..-..++++||.+.+.+-+. .+-+.++..-.+.+.+
T Consensus 347 ~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~i 420 (438)
T COG2270 347 LGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLI 420 (438)
T ss_pred HHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 3357899999999999999999998764 35689999999999999999999987653 3467777777777777
Q ss_pred HHHHHHh
Q 014067 84 SIPIFLL 90 (431)
Q Consensus 84 ~~iif~~ 90 (431)
++++++.
T Consensus 421 Gl~~L~~ 427 (438)
T COG2270 421 GLLLLLR 427 (438)
T ss_pred hHhhEEe
Confidence 7765543
No 258
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=65.22 E-value=68 Score=33.24 Aligned_cols=28 Identities=7% Similarity=0.291 Sum_probs=25.2
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhccc
Q 014067 39 RSAFFNYYVFCLSCGALIAVTFVVWIED 66 (431)
Q Consensus 39 ~~~~f~~~Y~~iNiG~~i~~~~~~~l~~ 66 (431)
..++|..+..+.|+|.++|..+..++.+
T Consensus 178 AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 178 AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999999999999999999888876
No 259
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=63.37 E-value=68 Score=28.98 Aligned_cols=62 Identities=18% Similarity=0.117 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCc-hhhhHHHHHHHH-HHHHHHHHhhhhhhhhc
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPL-SMRSLATSLSWA-SLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~-~~~g~~~gl~~l-~~~iG~~l~~~l~~~~~ 377 (431)
+.++++...++.++++....|...+.+.+..|+ +.++...+.... ...+|..+++.+...+.
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666677778999989999999999999998 778888888888 57778888876665554
No 260
>PRK07331 cobalt transport protein CbiM; Provisional
Probab=60.66 E-value=1.1e+02 Score=29.90 Aligned_cols=107 Identities=21% Similarity=0.181 Sum_probs=57.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhh-----hcCCC-CCCCC
Q 014067 239 VFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAV-----NSGLV-NSSEP 312 (431)
Q Consensus 239 ~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~-----~~g~~-~~~~~ 312 (431)
-.|.+.+.+..++..+++++..+|+. ++..+.+..+++-..++....++....-.-... ..|.. ..+-.
T Consensus 107 GaN~l~ma~~~~~v~y~iyr~~~~~~-----~~~~~~~~~~f~gg~l~i~~~al~~al~l~~~~~~~~~~~g~~~~~~~~ 181 (322)
T PRK07331 107 GANCFNMAFIMPFVGYYIYKFIKKWT-----KSKKGEYIGAFIGGYIGINVAALFAAIEFGLQPLLFKDASGLPLYSPYP 181 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCccccccch
Confidence 45666555556677777887776532 222334444445555555444433221111100 01100 00000
Q ss_pred cchhHHHHHHHHHHH-HhhhhhhhhhhhhhhhcccCchh
Q 014067 313 LPITFLWVALQYLFL-GSADLFTLAGMMEFFFTDAPLSM 350 (431)
Q Consensus 313 ~~~s~~wli~~~~l~-~igE~~~~~~~~~~~~~~aP~~~ 350 (431)
...++.-+.+..+.+ ++.|-++......++.+..|+-.
T Consensus 182 ~~~~~~~m~~~hl~i~gi~Eg~iT~~v~~~l~~~~p~ll 220 (322)
T PRK07331 182 LSVTIPAMLLPHLLVAGILEGIFTALVFSFIKRVSPGIL 220 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHh
Confidence 112344467777776 99999999999999999888764
No 261
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=58.31 E-value=2.3e+02 Score=29.32 Aligned_cols=53 Identities=15% Similarity=0.053 Sum_probs=42.6
Q ss_pred HHHHhhhhhhhh----hhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 325 LFLGSADLFTLA----GMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 325 ~l~~igE~~~~~----~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
++.-++|+.-+. --+.|+-+++-.+...+..+++.+..+++..+++.+.....
T Consensus 152 ~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 152 LFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445567776443 44678888899999999999999999999999998887765
No 262
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=55.84 E-value=66 Score=32.52 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=24.4
Q ss_pred CCCcCchhHHHHHHHHHHHHHHHHHHhhh
Q 014067 234 PASLPVFPVIFILILAPVYNHVIIPFARK 262 (431)
Q Consensus 234 ~~~l~~~n~~~iil~~pl~~~~~~pl~~~ 262 (431)
.+.+.++|.++-++++|+++.+.+|+..|
T Consensus 45 iG~i~s~~~~~~l~~qp~~G~i~Dklg~k 73 (412)
T PF01306_consen 45 IGIIFSAGSLFALLAQPVYGFISDKLGLK 73 (412)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcchhhhh
Confidence 46678899999999999999988877654
No 263
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=53.66 E-value=2.6e+02 Score=28.48 Aligned_cols=63 Identities=13% Similarity=-0.004 Sum_probs=47.8
Q ss_pred chhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 314 PITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 314 ~~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
..|...++...++-=+|=-....+...++-+..|++.||...|+-....++-..+.-.++-..
T Consensus 353 ~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 353 SISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 356656666656655666566677778888899999999999999999998888876665444
No 264
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=51.37 E-value=28 Score=31.66 Aligned_cols=76 Identities=17% Similarity=0.186 Sum_probs=52.9
Q ss_pred HHHHHHHhcccCcccCchhhhcccCCCCChhhhhhhhhHHHHHHH-HHHHHHHHHhhhhhhcccc--cCchhHHHHHHHH
Q 014067 4 AGLYIVALGVGGIKGSLAPHGAEQYDETTQLGRKQRSAFFNYYVF-CLSCGALIAVTFVVWIEDN--KGWQWGFGISTAT 80 (431)
Q Consensus 4 ~~l~li~~G~g~~kp~~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~-~iNiG~~i~~~~~~~l~~~--~g~~~~F~i~~i~ 80 (431)
+...+.+++.|...|...+...+.+++ . .++...+++... ..++|..+++.+.+.+... .+|+..|.+....
T Consensus 99 ~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 99 ILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 344446788888999999999999876 2 135566777677 5788888888777766543 5788866655554
Q ss_pred HHHH
Q 014067 81 ILLS 84 (431)
Q Consensus 81 ~~i~ 84 (431)
....
T Consensus 174 ~~~~ 177 (338)
T COG0477 174 GLLL 177 (338)
T ss_pred HHHH
Confidence 4433
No 265
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=50.13 E-value=1.8e+02 Score=29.30 Aligned_cols=94 Identities=16% Similarity=0.075 Sum_probs=59.0
Q ss_pred HHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHHHHHHHHHHHHhhh
Q 014067 252 YNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFLWVALQYLFLGSAD 331 (431)
Q Consensus 252 ~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~wli~~~~l~~igE 331 (431)
..++..|+.-++ .+-..|+.+..+++++++++.++.+. ..+.+.-.+..-+-.|+||
T Consensus 74 ~~Kl~aP~fi~~------v~y~~Ri~~~~~l~~~g~l~va~~~~-----------------v~~~l~Gv~las~ssg~GE 130 (402)
T PF02487_consen 74 LVKLIAPFFIHR------VPYWIRILICVALSAAGMLLVAFSPS-----------------VWVRLLGVVLASLSSGLGE 130 (402)
T ss_pred HHHHHhHhhhhh------ccchHHHHHHHHHHHHHHhheeeccc-----------------hhHHHHHHHHHhhhhhhhH
Confidence 444555554332 56678999999999999988766421 1133333344444555666
Q ss_pred hhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 332 LFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 332 ~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
.+-+++....-+ ...+-|...++.|+.+|+.......
T Consensus 131 ----~tfL~lt~~y~~-----~~l~~wssGTG~aGl~Ga~~y~~lT 167 (402)
T PF02487_consen 131 ----VTFLSLTHFYGK-----SSLSAWSSGTGGAGLVGALYYLGLT 167 (402)
T ss_pred ----HHHHHHHHhcCc-----cccccccCCcChhhHHHHHHHHHHH
Confidence 555666544322 3578899999999999987765543
No 266
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=49.62 E-value=37 Score=34.77 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=53.1
Q ss_pred chhhhcccCCCCChhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHHHHHHHHhcCcce
Q 014067 20 LAPHGAEQYDETTQLGRKQRSAFFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILLSIPIFLLGSPFY 95 (431)
Q Consensus 20 ~~a~~~dq~~~~~~~~~~~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i~~iif~~~~~~~ 95 (431)
+.++.+..|...+.+.-+-.+..-+.-+.+-|+|.++|.+.-||+.|.+|=+-.++...+.|+++.+ ..+..+.
T Consensus 63 Vt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~--~~~~s~~ 136 (538)
T KOG0252|consen 63 VTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSA--LSGLSVG 136 (538)
T ss_pred HHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHH--HhccCCC
Confidence 4556666666554211111233445568899999999999999999999999999999999999886 3444433
No 267
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=48.81 E-value=3e+02 Score=27.77 Aligned_cols=86 Identities=10% Similarity=0.088 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCC
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLN 395 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n 395 (431)
..+..+...++.+++.....-..+-.+...-|+-.++.+.| .++++.+.+.+.-...... +| .+
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G-----~a~aG~l~Sl~~i~tka~~----------~~-~~ 179 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSG-----QALAGTLTSLLRILTKAAF----------SD-SR 179 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhc-----chhHhHHHHHHHHHHHHhc----------CC-CC
Confidence 44445667788889998888888888887777766666655 4555555444432222222 12 22
Q ss_pred cchhhHHHHHHHHHHHHHHHHHH
Q 014067 396 HYHLERFYWLMCILGGLNFLHFL 418 (431)
Q Consensus 396 ~~~l~~~f~~la~l~~v~~i~~~ 418 (431)
.+. ..||.+-.++.+++.+.|.
T Consensus 180 ~sA-~~yF~~s~~~~llC~i~y~ 201 (406)
T KOG1479|consen 180 TSA-LIYFITSTVILLLCFVLYL 201 (406)
T ss_pred cee-ehhHHHHHHHHHHHHHHHH
Confidence 222 2467777778888888888
No 268
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=48.43 E-value=2.9e+02 Score=28.64 Aligned_cols=30 Identities=10% Similarity=0.378 Sum_probs=26.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhhhcccc
Q 014067 38 QRSAFFNYYVFCLSCGALIAVTFVVWIEDN 67 (431)
Q Consensus 38 ~~~~~f~~~Y~~iNiG~~i~~~~~~~l~~~ 67 (431)
+..|+|..|..+.|++.+++..+..++.++
T Consensus 181 eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 181 EAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 456799999999999999999999988763
No 269
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.18 E-value=2e+02 Score=29.53 Aligned_cols=66 Identities=11% Similarity=0.150 Sum_probs=55.8
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhcccc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNIT 380 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~ 380 (431)
.+-+.....-.++|+|..+.+...-++.++.+.++-+....++.+.....+-.+|+.+.-.+...+
T Consensus 100 ~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~ 165 (461)
T KOG3098|consen 100 PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFS 165 (461)
T ss_pred cchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEec
Confidence 344566777899999999999999999999999999999999999999999999887766655433
No 270
>PF14007 YtpI: YtpI-like protein
Probab=45.34 E-value=52 Score=25.40 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHHHHHHHHhcCcceeecCC
Q 014067 47 VFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILLSIPIFLLGSPFYRNKIP 100 (431)
Q Consensus 47 Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i~~iif~~~~~~~~~~~p 100 (431)
-+.+.+|.++.....--+-. .+=...+.++++.+++++...+.|.|.|+|..|
T Consensus 34 ka~ialG~fl~~fgiNQ~~~-~~st~~~iV~~ifl~lG~~n~~~G~r~y~hy~p 86 (89)
T PF14007_consen 34 KANIALGIFLILFGINQMFL-FGSTVRLIVGAIFLVLGLFNLFAGIRAYRHYRP 86 (89)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 34566777765444332222 233678889999999999988899888877544
No 271
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=44.68 E-value=2e+02 Score=28.96 Aligned_cols=62 Identities=11% Similarity=0.079 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
|+|.++...+..|+-.-..++.....+.++.|++.|-+.||.-....++|-.++++++-.++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 56666667778888888888999999999999999999999999999999999998876654
No 272
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=42.81 E-value=4.1e+02 Score=27.60 Aligned_cols=54 Identities=20% Similarity=0.129 Sum_probs=44.8
Q ss_pred HHHHhhhhhhhh----hhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 014067 325 LFLGSADLFTLA----GMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNN 378 (431)
Q Consensus 325 ~l~~igE~~~~~----~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~ 378 (431)
++.-++|+..+. --+.++-+..+.+...+.-++..+..++|..+|+.+...+.+
T Consensus 148 lfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 148 LFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556776443 358999999999999999999999999999999999888875
No 273
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=42.45 E-value=65 Score=24.01 Aligned_cols=52 Identities=23% Similarity=0.406 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHHHHHHHHhcCccee
Q 014067 42 FFNYYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILLSIPIFLLGSPFYR 96 (431)
Q Consensus 42 ~f~~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i~~iif~~~~~~~~ 96 (431)
+-.++...+-+++++|. +.||+.++ ++..+.+-+++.++++++..=-++.|.
T Consensus 9 ae~l~~~il~~~~iisf-i~Gy~~q~--~~~~~~~~~~g~~~~~lv~vP~Wp~y~ 60 (76)
T PF06645_consen 9 AEKLMQYILIISAIISF-IVGYITQS--FSYTFYIYGAGVVLTLLVVVPPWPFYN 60 (76)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHhheeCCcHhhc
Confidence 45555777778887764 56677664 578888888888888887765555553
No 274
>PRK08319 cobalt transport protein CbiM; Validated
Probab=42.39 E-value=2.2e+02 Score=26.04 Aligned_cols=31 Identities=13% Similarity=0.098 Sum_probs=26.3
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccCchhh
Q 014067 321 ALQYLFLGSADLFTLAGMMEFFFTDAPLSMR 351 (431)
Q Consensus 321 i~~~~l~~igE~~~~~~~~~~~~~~aP~~~~ 351 (431)
.+.++.++++|.++......+..+.-|+=.+
T Consensus 183 ~~~~l~l~~~Eg~itg~~v~~l~~~rP~~l~ 213 (224)
T PRK08319 183 AVTQIPLAIAEGLLTVLIFNYLTKYRPDLLV 213 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHh
Confidence 4666789999999999999999998888664
No 275
>PRK11909 cobalt transport protein CbiM; Provisional
Probab=40.15 E-value=3e+02 Score=25.33 Aligned_cols=36 Identities=6% Similarity=0.050 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHH-HhhhhhhhhhhhhhhhcccCchhh
Q 014067 316 TFLWVALQYLFL-GSADLFTLAGMMEFFFTDAPLSMR 351 (431)
Q Consensus 316 s~~wli~~~~l~-~igE~~~~~~~~~~~~~~aP~~~~ 351 (431)
+..-+.+..+.+ ++.|-++......++.+.-|+++-
T Consensus 182 ~~~~~~~~h~~i~~i~Eg~iT~~~~~~l~~~~~~~~l 218 (230)
T PRK11909 182 SIPAMLFAHLTVAGIVEAIVTGLVVYYLQKADEENLL 218 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHh
Confidence 455677788887 999999999999999988666554
No 276
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=38.26 E-value=4.4e+02 Score=26.71 Aligned_cols=164 Identities=13% Similarity=0.164 Sum_probs=79.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhH-
Q 014067 239 VFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITF- 317 (431)
Q Consensus 239 ~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~- 317 (431)
.-+.-.=++.+|++|.+..+ |.++| |..-.+.+..+|.++..++..+-- +.-++++...++.
T Consensus 74 y~P~sLKllWaPiVDs~y~k---~~Grr-ksWvvp~q~llG~~mllLs~~v~~-------------~~g~ng~~p~v~~l 136 (510)
T KOG3574|consen 74 YWPFSLKLLWAPIVDSVYSK---RFGRR-KSWVVPCQYLLGLFMLLLSYLVDR-------------GLGGNGGLPNVVAL 136 (510)
T ss_pred hhHHHHHHHHHhhhHHHHHH---hhccc-cceeeehHHHHHHHHHHHhhCCCc-------------ccccCCCCcchHHH
Confidence 33444567888888876533 33322 335566777788776655443311 1111211111222
Q ss_pred -HHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCc
Q 014067 318 -LWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNH 396 (431)
Q Consensus 318 -~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~ 396 (431)
||+.+--++-+.=++-+..=++.+. +|+ .-|-+..........|.++|..+.-...... =+..++..-..++
T Consensus 137 t~~f~LLnflaAtQDIAVDgwALtmL---s~e-~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~d---F~N~y~rs~P~~~ 209 (510)
T KOG3574|consen 137 TLLFLLLNFLAATQDIAVDGWALTML---SRE-NLGYASTCQSVGQTAGYFLGNVVFLALESPD---FCNTYLRSIPLDQ 209 (510)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHhc---CHh-hcCchhHHHHHHHhhhHHhhcceeeEecChh---hhhHHHhcCcCcc
Confidence 3445555555555544443333332 333 3344444455555666666654432222100 0001110001223
Q ss_pred c--hhhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 014067 397 Y--HLERFYWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 397 ~--~l~~~f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
+ .+..|+++.|.+..++..+-.++-|.-++
T Consensus 210 g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~ 241 (510)
T KOG3574|consen 210 GFITLAGYLWFWGALFIVATTLVALLKKENDE 241 (510)
T ss_pred ceEEhhHHHHHHHHHHHHHHHHHHHhcCCCch
Confidence 3 36678888888888888877777665443
No 277
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=38.12 E-value=3.1e+02 Score=27.38 Aligned_cols=102 Identities=11% Similarity=0.098 Sum_probs=65.3
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCC
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNL 394 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~ 394 (431)
-++||.-..|++....-.+..+++...+++.--++.-|+..|++-+ ++-.+-.++.-.+.+ +.++ .-++
T Consensus 324 ~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTF---vAl~lQsilT~iVvd-------~~g~-~L~i 392 (433)
T KOG3810|consen 324 QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTF---VALILQSILTLIVVD-------DRGL-GLDI 392 (433)
T ss_pred cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHH---HHHHHHHhheEEEEc-------cccc-CCCc
Confidence 3588888999999888888777776777766677777888887766 333444344333332 1222 2222
Q ss_pred Ccch--hhHHHHHHHHHHHHHHHHHHHHhhccccc
Q 014067 395 NHYH--LERFYWLMCILGGLNFLHFLFWAARYKYS 427 (431)
Q Consensus 395 n~~~--l~~~f~~la~l~~v~~i~~~~~~~~~~~~ 427 (431)
.... +..||.++|++.++...+.....|+-+..
T Consensus 393 r~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~~~~~ 427 (433)
T KOG3810|consen 393 RTQFVVYSSYFIVLGVIFLIGFGIEYLMCRRNKVP 427 (433)
T ss_pred ceeEEEEeehHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 2221 33589999999998877766666555443
No 278
>PRK11715 inner membrane protein; Provisional
Probab=34.89 E-value=5.1e+02 Score=26.44 Aligned_cols=19 Identities=16% Similarity=0.245 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 014067 278 TGLILSIVAMAVAALVEIK 296 (431)
Q Consensus 278 ~G~~l~~l~~~~~~~~~~~ 296 (431)
-|+++.++.|+...+.|..
T Consensus 306 YgiLFI~LTF~~fFlfE~~ 324 (436)
T PRK11715 306 YAILFIALTFAAFFLFELL 324 (436)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 5889999999999999864
No 279
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=34.32 E-value=1.3e+02 Score=29.69 Aligned_cols=88 Identities=13% Similarity=0.067 Sum_probs=53.0
Q ss_pred hhHHHHHHHhcccCcccCchhhhcccCCCCC-hhhhhhhhhHHHHHH-HHHHHHHHHHhhhhhhcccccCc--hhHHHHH
Q 014067 2 LFAGLYIVALGVGGIKGSLAPHGAEQYDETT-QLGRKQRSAFFNYYV-FCLSCGALIAVTFVVWIEDNKGW--QWGFGIS 77 (431)
Q Consensus 2 ~~~~l~li~~G~g~~kp~~~a~~~dq~~~~~-~~~~~~~~~~f~~~Y-~~iNiG~~i~~~~~~~l~~~~g~--~~~F~i~ 77 (431)
+++|.++-++++.....+--+=...+.++.+ |+| ....-|+..- +.+.+=++++.+++-++.+..+. ...|..+
T Consensus 124 L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~--~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a 201 (354)
T PF05631_consen 124 LLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQE--WLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAA 201 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH--HHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHH
Confidence 5677778888887776665554444444333 211 2344555444 23334455666666666666555 6889999
Q ss_pred HHHHHHHHHHHHhc
Q 014067 78 TATILLSIPIFLLG 91 (431)
Q Consensus 78 ~i~~~i~~iif~~~ 91 (431)
.+...++.++....
T Consensus 202 ~~~l~~~~~~I~~~ 215 (354)
T PF05631_consen 202 IVLLAVAAVLILKT 215 (354)
T ss_pred HHHHHHHHHHHHhc
Confidence 88888887655433
No 280
>TIGR00123 cbiM cobalamin biosynthesis protein CbiM. In Methanobacterium thermoautotrophicum, Archaeoglobus fulgidus, and Methanococcus jannaschii, a second homolog of cbiM is also found. These cbiM-related proteins appear to represent a distinct but less well-conserved orthologous group. Still more distant homologs include sll0383 from Synechocystis sp. and HI1621 from Haemophilus influenzae; the latter protein, from a species that does not synthesize cobalamin, is the most divergent member of the group. The functions of and relationships among the set of proteins homologous to cbiM have not been determined.
Probab=33.27 E-value=3.7e+02 Score=24.39 Aligned_cols=101 Identities=7% Similarity=0.046 Sum_probs=54.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchh-
Q 014067 238 PVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPIT- 316 (431)
Q Consensus 238 ~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s- 316 (431)
.-.|.+.+.+..++..++++++.+|.+ . +....-+..|.+-..++.+..++ |. -. ..+ .+......+
T Consensus 108 LG~N~l~m~~~~~~~~~~~~~~~~~~~-l---~~~v~~f~~gf~~~~l~~~~~~~-~l---~l--~~~--~~~~~~~~~~ 175 (214)
T TIGR00123 108 LGANGFSMGVIGPFVGWIVYKLACRAG-L---RRDVAVFLAAMLGDLATYVVTSV-QL---AL--AFP--IPHAGFTGSV 175 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-c---chHHHHHHHHHHHHHHHHHHHHH-HH---HH--hCC--CcccchHHHH
Confidence 346777777777778888888887631 1 11122222333222222222222 10 00 000 000000111
Q ss_pred ---HHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchh
Q 014067 317 ---FLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSM 350 (431)
Q Consensus 317 ---~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~ 350 (431)
.....+.++.+++.|-++......++.+..|+-.
T Consensus 176 ~~~~~~~~~~h~~~~i~Eg~iT~~~~~~l~~~~p~~l 212 (214)
T TIGR00123 176 VKFMGIFAYTQVPLAIAEGLLTVMIYDYITKLRPDTL 212 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhh
Confidence 3345566678899999999999999999988753
No 281
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=32.98 E-value=5.4e+02 Score=26.19 Aligned_cols=20 Identities=15% Similarity=0.210 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 014067 278 TGLILSIVAMAVAALVEIKR 297 (431)
Q Consensus 278 ~G~~l~~l~~~~~~~~~~~~ 297 (431)
-|+++.++.|+...+.|..+
T Consensus 300 YgiLFI~LTF~~fflfE~~~ 319 (430)
T PF06123_consen 300 YGILFIGLTFLAFFLFELLS 319 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 57888999999999999643
No 282
>PRK03612 spermidine synthase; Provisional
Probab=29.37 E-value=75 Score=33.22 Aligned_cols=51 Identities=12% Similarity=-0.028 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhccc-ccCchhHH-HHHHHHHHHHHHHHHhc
Q 014067 41 AFFNYYVFCLSCGALIAVTFVVWIED-NKGWQWGF-GISTATILLSIPIFLLG 91 (431)
Q Consensus 41 ~~f~~~Y~~iNiG~~i~~~~~~~l~~-~~g~~~~F-~i~~i~~~i~~iif~~~ 91 (431)
+..+..|.+..+|+++|.++.+++-- .+|-.... .++++..+++++..+..
T Consensus 145 ~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~~~ 197 (521)
T PRK03612 145 HNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLWLF 197 (521)
T ss_pred hhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677799999999999999887654 56655444 44444444444443333
No 283
>PRK06265 cobalt transport protein CbiM; Validated
Probab=29.03 E-value=4.2e+02 Score=23.66 Aligned_cols=96 Identities=16% Similarity=0.103 Sum_probs=52.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcchhHH
Q 014067 239 VFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLPITFL 318 (431)
Q Consensus 239 ~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~ 318 (431)
-.|.+...+-.++...+.++..||. + ..+...|++-..++....++....-...+ | ..+....
T Consensus 101 G~N~l~m~~p~~~~~~~~~~~~~~~------~--~~~~~~~f~~~~l~v~~~~l~~~~~l~l~---~------~~~~~~~ 163 (199)
T PRK06265 101 GVNTLNMALPAVLAGYLFRKLLRRT------P--PPRGLAAFLAGALAVFLAALLCALELALS---G------GFPFVPA 163 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc------c--chHHHHHHHHHHHHHHHHHHHHHHHHHHc---c------cccHHHH
Confidence 3455555544455555555555431 2 24556677666666665554432111111 0 0111111
Q ss_pred --HHHHHHHHHHhhhhhhhhhhhhhhhcccCchhh
Q 014067 319 --WVALQYLFLGSADLFTLAGMMEFFFTDAPLSMR 351 (431)
Q Consensus 319 --wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~ 351 (431)
-+.+.++.+++.|.++......+..+.-|+-.+
T Consensus 164 ~~~~~~~~~~l~~~Eg~ltg~~v~~l~~~rP~~l~ 198 (199)
T PRK06265 164 AKLLGLAHLPLMVIEGIITAFAVSFLARVRPELLK 198 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhcc
Confidence 122555667777999999988988888887543
No 284
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=28.24 E-value=2.1e+02 Score=19.98 Aligned_cols=38 Identities=5% Similarity=-0.025 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHH
Q 014067 45 YYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATIL 82 (431)
Q Consensus 45 ~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~ 82 (431)
-+.|+.-+|..++.+.....+..+++..+-.++.+..+
T Consensus 6 t~fWs~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i 43 (57)
T PF11151_consen 6 TFFWSFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGI 43 (57)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Confidence 35799999999998888888777776666444443333
No 285
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.17 E-value=1.4e+02 Score=23.25 Aligned_cols=49 Identities=20% Similarity=0.302 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccCchhHHHHHHHHHHHHHHHHHhcCccee
Q 014067 45 YYVFCLSCGALIAVTFVVWIEDNKGWQWGFGISTATILLSIPIFLLGSPFYR 96 (431)
Q Consensus 45 ~~Y~~iNiG~~i~~~~~~~l~~~~g~~~~F~i~~i~~~i~~iif~~~~~~~~ 96 (431)
++-..+-+|+++|.+.+-+- +.++|. -.+-+++.++.+++.+=-+++|+
T Consensus 27 ~~q~ilti~aiVg~i~Gf~~-Qqls~t--vy~vg~~~v~t~li~LPpwP~y~ 75 (101)
T KOG4112|consen 27 FQQLILTIGAIVGFIYGFAQ-QQLSVT--VYIVGAGFVFTLLITLPPWPWYR 75 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHhcCCCchhhh
Confidence 34778889999987765544 445543 33445555555554444444443
No 286
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=26.00 E-value=78 Score=26.04 Aligned_cols=25 Identities=16% Similarity=0.034 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccc
Q 014067 402 FYWLMCILGGLNFLHFLFWAARYKY 426 (431)
Q Consensus 402 ~f~~la~l~~v~~i~~~~~~~~~~~ 426 (431)
.|.++|++.++.+++++++.|+.|+
T Consensus 70 i~gv~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 70 IFGVMAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3555666555555545555444433
No 287
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.70 E-value=1.2e+02 Score=29.57 Aligned_cols=32 Identities=25% Similarity=0.449 Sum_probs=22.6
Q ss_pred hhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhh
Q 014067 342 FFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIV 376 (431)
Q Consensus 342 ~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~ 376 (431)
.+-+=|..|| .|+|+++.+.|++++.+++-.+
T Consensus 206 LFPLWP~~mR---~gvyY~sig~~gfl~~IlvLaI 237 (372)
T KOG2927|consen 206 LFPLWPRRMR---QGVYYLSIGAGGFLAFILVLAI 237 (372)
T ss_pred hcccCcHHHh---cceeeeecchhHHHHHHHHHHH
Confidence 3445677877 7888988888888876555443
No 288
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=25.34 E-value=55 Score=30.82 Aligned_cols=59 Identities=14% Similarity=0.307 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhc---c--cccCchhHHHHHHHHHHHHHHHHHhcCcceeecCC
Q 014067 42 FFNYYVFCLSCGALIAVTFVVWI---E--DNKGWQWGFGISTATILLSIPIFLLGSPFYRNKIP 100 (431)
Q Consensus 42 ~f~~~Y~~iNiG~~i~~~~~~~l---~--~~~g~~~~F~i~~i~~~i~~iif~~~~~~~~~~~p 100 (431)
.-++.-|+-|+|++++.+.--.- . -+-.|+..+.+.++..++-++++....+++++.++
T Consensus 7 ~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~ 70 (267)
T PF07672_consen 7 LSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSP 70 (267)
T ss_pred eeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCc
Confidence 33444678899999864332211 1 12359999999999888888888666666654333
No 289
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=25.21 E-value=8.1e+02 Score=25.68 Aligned_cols=67 Identities=13% Similarity=0.186 Sum_probs=53.8
Q ss_pred chhHH-HHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhh-hhhhcccc
Q 014067 314 PITFL-WVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVL-VSIVNNIT 380 (431)
Q Consensus 314 ~~s~~-wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l-~~~~~~~~ 380 (431)
+.+++ .++.+|++.++.--..+++.++|-++.|.+..=|++|-+.+-..++|+.--..+ ..+++..|
T Consensus 401 ~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 401 PTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 44443 356899999999999999999999999999999999999999998887655533 34555555
No 290
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=24.98 E-value=3e+02 Score=22.36 Aligned_cols=60 Identities=15% Similarity=0.083 Sum_probs=36.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhc
Q 014067 349 SMRSLATSLSWASLAMGYYFSTVLVSIVNNITSTYRHTPWLFGSNLNHYHLERFYWLMCILGGLNFLHFLFWAAR 423 (431)
Q Consensus 349 ~~~g~~~gl~~l~~~iG~~l~~~l~~~~~~~~~~~~~~~w~~~~~~n~~~l~~~f~~la~l~~v~~i~~~~~~~~ 423 (431)
..|+.+.++..+..+..-++.+.+.. +..+. ++....| -++++|+++++-++.+..++..
T Consensus 40 pwK~I~la~~Lli~G~~li~~g~l~~-~~~i~-~~~~~~~-------------~llilG~L~fIPG~Y~~~i~y~ 99 (115)
T PF05915_consen 40 PWKSIALAVFLLIFGTVLIIIGLLLF-FGHID-GDRDRGW-------------ALLILGILCFIPGFYHTRIAYY 99 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hcccC-CCCcccc-------------hHHHHHHHHHhccHHHHHHHHH
Confidence 48888888888877666555444322 12111 1112223 4888999999888777666543
No 291
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=24.52 E-value=7.5e+02 Score=25.05 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhhhcccCchhhhHHHHHHHHHHHHHHHHhhhhhhhhc
Q 014067 316 TFLWVALQYLFLGSADLFTLAGMMEFFFTDAPLSMRSLATSLSWASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 316 s~~wli~~~~l~~igE~~~~~~~~~~~~~~aP~~~~g~~~gl~~l~~~iG~~l~~~l~~~~~ 377 (431)
|++++-...++.|++-.. .+.-+++++...|+++--.+.+..-...-+|..+|+.++.++.
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllv 153 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLV 153 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455655555555544332 3777899999999998888888777777788888888877664
No 292
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=21.66 E-value=7.9e+02 Score=24.30 Aligned_cols=110 Identities=15% Similarity=0.072 Sum_probs=59.0
Q ss_pred CCcCchhHHHHHHHHHHHHHHHHHHhhhccCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCcc
Q 014067 235 ASLPVFPVIFILILAPVYNHVIIPFARKVTKTEMGITHLQRIGTGLILSIVAMAVAALVEIKRKRVAVNSGLVNSSEPLP 314 (431)
Q Consensus 235 ~~l~~~n~~~iil~~pl~~~~~~pl~~~~~~~~~~~s~~~ki~~G~~l~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 314 (431)
+.+-..-....+++.|+.+.+.+++.||+ ..++.++-+....+... .
T Consensus 72 a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~---------------~cl~~cily~~scl~k~------------------~ 118 (354)
T PF05631_consen 72 AILFVAGFASSAIFGTFVGSLADRYGRKK---------------ACLLFCILYSLSCLTKH------------------S 118 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchH---------------HHHHHHHHHHHHHHHHh------------------c
Confidence 34455566677888899888877766542 12223333333333221 1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhh-----hhhhcccCchhhhHHHHHHH-HHHHHHHHHhhhhhhhhc
Q 014067 315 ITFLWVALQYLFLGSADLFTLAGMM-----EFFFTDAPLSMRSLATSLSW-ASLAMGYYFSTVLVSIVN 377 (431)
Q Consensus 315 ~s~~wli~~~~l~~igE~~~~~~~~-----~~~~~~aP~~~~g~~~gl~~-l~~~iG~~l~~~l~~~~~ 377 (431)
-+.+.++..-++-|++-.+.+..-= |.-.+--|++.-+...+..- +.+++-..+++.+.+...
T Consensus 119 ~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~ 187 (354)
T PF05631_consen 119 SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLA 187 (354)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHH
Confidence 2455677788888888877655332 33333445554444333222 334455555666665554
No 293
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=20.22 E-value=1.2e+02 Score=23.21 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=14.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 014067 399 LERFYWLMCILGGLNFLHFLFWAARYKYSSTGP 431 (431)
Q Consensus 399 l~~~f~~la~l~~v~~i~~~~~~~~~~~~~~~~ 431 (431)
++.-|+..+++-++..+.|+.+- +-++|.|-|
T Consensus 33 Lgm~~lvI~~iFil~VilwfvCC-~kRkrsRrP 64 (94)
T PF05393_consen 33 LGMWFLVICGIFILLVILWFVCC-KKRKRSRRP 64 (94)
T ss_pred cchhHHHHHHHHHHHHHHHHHHH-HHhhhccCC
Confidence 44445555544344444444333 334444443
Done!