Query 014068
Match_columns 431
No_of_seqs 433 out of 3576
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 04:55:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014068.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014068hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g8k_A 2-5A-dependent ribonucl 100.0 3.6E-34 1.2E-38 282.4 18.8 251 1-273 30-331 (337)
2 4gpm_A Engineered protein OR26 100.0 5.9E-34 2E-38 255.7 17.0 153 1-197 9-162 (169)
3 3ljn_A Hypothetical protein; a 100.0 2.1E-33 7.1E-38 279.9 15.2 210 1-229 25-261 (364)
4 1yyh_A HN1;, notch 1, ankyrin 100.0 2.5E-32 8.5E-37 258.9 18.8 209 1-229 15-240 (253)
5 1wdy_A 2-5A-dependent ribonucl 100.0 8.6E-32 2.9E-36 256.3 22.5 261 1-273 10-283 (285)
6 1oy3_D Transcription factor in 100.0 3.4E-32 1.1E-36 259.7 18.5 205 1-223 14-269 (282)
7 3b7b_A Euchromatic histone-lys 100.0 1.4E-31 4.8E-36 249.8 19.8 203 1-224 16-222 (237)
8 1n11_A Ankyrin; clathrin, BAND 100.0 6.9E-32 2.4E-36 275.1 17.8 280 1-295 19-330 (437)
9 1n11_A Ankyrin; clathrin, BAND 100.0 8.3E-32 2.8E-36 274.5 17.9 282 1-295 52-363 (437)
10 2xai_A ASB-9, ankyrin repeat a 100.0 3.5E-31 1.2E-35 252.3 19.6 146 1-191 8-153 (261)
11 1k1a_A B-cell lymphoma 3-encod 100.0 1.5E-31 5E-36 249.7 16.0 211 1-229 14-233 (241)
12 2dzn_A Probable 26S proteasome 100.0 1.6E-31 5.3E-36 247.7 15.5 193 1-205 7-209 (228)
13 1yyh_A HN1;, notch 1, ankyrin 100.0 5.2E-31 1.8E-35 249.8 18.6 182 1-196 62-247 (253)
14 2f8y_A Notch homolog 1, transl 100.0 9.5E-31 3.2E-35 241.9 19.5 201 7-227 2-206 (223)
15 2f8y_A Notch homolog 1, transl 100.0 1.1E-30 3.8E-35 241.4 17.0 183 1-197 30-216 (223)
16 3utm_A Tankyrase-1; tankyrase, 100.0 4.3E-30 1.5E-34 252.1 22.1 240 1-283 29-320 (351)
17 3d9h_A CDNA FLJ77766, highly s 100.0 2.7E-30 9.3E-35 249.8 20.1 176 1-192 64-242 (285)
18 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.7E-30 5.8E-35 231.2 16.7 150 1-194 19-168 (169)
19 2rfa_A Transient receptor pote 100.0 2.1E-30 7E-35 241.3 17.9 181 1-195 8-220 (232)
20 2fo1_E LIN-12 protein; beta-ba 100.0 8.1E-31 2.8E-35 263.2 15.6 216 1-227 130-361 (373)
21 1wdy_A 2-5A-dependent ribonucl 100.0 5.8E-30 2E-34 243.6 20.5 207 1-229 44-270 (285)
22 3hra_A Ankyrin repeat family p 100.0 3.6E-30 1.2E-34 234.1 18.0 181 1-194 10-200 (201)
23 3aji_A 26S proteasome non-ATPa 100.0 2.2E-30 7.7E-35 240.6 17.0 186 1-200 11-201 (231)
24 3aji_A 26S proteasome non-ATPa 100.0 3.4E-30 1.2E-34 239.4 16.6 179 1-193 45-226 (231)
25 3utm_A Tankyrase-1; tankyrase, 100.0 7.4E-30 2.5E-34 250.5 19.7 202 1-221 63-322 (351)
26 1awc_B Protein (GA binding pro 100.0 4.7E-30 1.6E-34 224.4 15.8 147 1-192 7-153 (153)
27 3v31_A Ankyrin repeat family A 100.0 6.9E-30 2.4E-34 226.2 15.1 150 1-194 8-157 (167)
28 4b93_B Ankyrin repeat domain-c 100.0 6.4E-30 2.2E-34 245.9 15.9 155 1-199 16-180 (269)
29 1k1a_A B-cell lymphoma 3-encod 100.0 3E-30 1E-34 240.8 13.0 181 1-195 51-239 (241)
30 4b93_B Ankyrin repeat domain-c 100.0 3.4E-30 1.1E-34 247.9 13.6 170 1-184 57-230 (269)
31 1s70_B 130 kDa myosin-binding 100.0 1.6E-29 5.5E-34 243.9 17.8 201 1-205 45-266 (299)
32 2etb_A Transient receptor pote 100.0 1.7E-30 5.7E-35 246.1 10.2 180 1-194 7-243 (256)
33 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.8E-30 1.6E-34 225.6 12.4 149 1-194 10-159 (162)
34 3eu9_A Huntingtin-interacting 100.0 3.2E-29 1.1E-33 232.7 18.5 203 1-225 14-223 (240)
35 3v30_A DNA-binding protein rfx 100.0 1.4E-29 4.6E-34 225.4 14.8 150 1-194 7-157 (172)
36 2rfm_A Putative ankyrin repeat 100.0 7.7E-30 2.6E-34 231.3 13.3 152 29-193 34-188 (192)
37 1ikn_D Protein (I-kappa-B-alph 100.0 9.5E-31 3.3E-35 244.7 7.4 185 1-196 13-208 (236)
38 3kea_A K1L; tropism, ANK repea 100.0 2.2E-29 7.4E-34 243.7 14.1 239 5-273 8-251 (285)
39 1oy3_D Transcription factor in 100.0 2E-28 6.7E-33 233.5 20.5 218 22-282 2-264 (282)
40 2xai_A ASB-9, ankyrin repeat a 100.0 2.7E-29 9.2E-34 239.2 14.2 177 1-194 41-219 (261)
41 2fo1_E LIN-12 protein; beta-ba 100.0 3.4E-29 1.2E-33 251.4 15.6 184 1-195 171-369 (373)
42 3b7b_A Euchromatic histone-lys 100.0 6.2E-29 2.1E-33 231.8 16.0 174 1-188 49-226 (237)
43 3ljn_A Hypothetical protein; a 100.0 2.9E-29 9.9E-34 249.8 14.1 179 1-195 58-267 (364)
44 3d9h_A CDNA FLJ77766, highly s 100.0 4.2E-29 1.4E-33 241.5 14.1 178 1-195 97-276 (285)
45 4hbd_A KN motif and ankyrin re 100.0 2.3E-29 7.8E-34 242.5 12.0 182 1-196 81-274 (276)
46 3f6q_A Integrin-linked protein 100.0 7E-29 2.4E-33 222.6 13.9 158 1-202 10-169 (179)
47 3twr_A Tankyrase-2; ankyrin re 100.0 4.1E-29 1.4E-33 220.8 11.9 150 1-195 13-163 (165)
48 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.2E-28 4.3E-33 215.4 14.2 148 1-194 7-155 (156)
49 2pnn_A Transient receptor pote 100.0 1.3E-29 4.5E-34 242.4 7.7 182 1-196 18-257 (273)
50 2dzn_A Probable 26S proteasome 100.0 1.7E-27 5.9E-32 220.4 21.4 204 30-283 2-215 (228)
51 4gpm_A Engineered protein OR26 100.0 1.1E-27 3.8E-32 214.7 19.2 141 32-223 6-147 (169)
52 4g8k_A 2-5A-dependent ribonucl 100.0 8E-28 2.7E-32 236.9 20.0 203 1-229 64-318 (337)
53 1s70_B 130 kDa myosin-binding 100.0 7.5E-29 2.6E-33 239.3 12.2 184 1-195 78-288 (299)
54 3jxi_A Vanilloid receptor-rela 100.0 1.9E-29 6.4E-34 239.1 7.3 181 1-194 10-247 (260)
55 3kea_A K1L; tropism, ANK repea 100.0 2.4E-28 8.3E-33 236.3 14.5 209 42-274 12-226 (285)
56 2pnn_A Transient receptor pote 100.0 2.9E-28 9.8E-33 233.0 14.3 228 19-279 3-270 (273)
57 2rfa_A Transient receptor pote 100.0 4.2E-27 1.4E-31 218.9 21.8 212 29-273 2-227 (232)
58 3eu9_A Huntingtin-interacting 100.0 1.3E-27 4.3E-32 221.9 16.3 183 1-195 47-233 (240)
59 1sw6_A Regulatory protein SWI6 99.9 2.2E-27 7.6E-32 234.1 11.0 193 1-222 102-326 (327)
60 2rfm_A Putative ankyrin repeat 99.9 1.4E-26 4.8E-31 209.7 14.9 151 55-226 30-181 (192)
61 1ikn_D Protein (I-kappa-B-alph 99.9 1.2E-26 4E-31 216.9 14.4 194 24-270 3-211 (236)
62 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.3E-27 1.1E-31 222.2 10.6 154 1-199 10-167 (239)
63 1d9s_A Cyclin-dependent kinase 99.9 1.3E-26 4.4E-31 198.8 11.8 131 19-193 2-132 (136)
64 3t8k_A Uncharacterized protein 99.9 2.5E-27 8.7E-32 215.6 7.1 148 1-193 11-175 (186)
65 3jxi_A Vanilloid receptor-rela 99.9 4.6E-26 1.6E-30 215.7 15.9 212 29-272 4-254 (260)
66 3v31_A Ankyrin repeat family A 99.9 6.8E-26 2.3E-30 200.4 15.7 148 29-227 2-150 (167)
67 2etb_A Transient receptor pote 99.9 4.1E-26 1.4E-30 215.8 15.2 169 29-197 1-207 (256)
68 3c5r_A BARD-1, BRCA1-associate 99.9 1.6E-26 5.3E-31 198.2 9.8 132 19-195 1-132 (137)
69 3v30_A DNA-binding protein rfx 99.9 2.5E-25 8.7E-30 197.6 17.8 164 30-274 2-166 (172)
70 1sw6_A Regulatory protein SWI6 99.9 7.9E-28 2.7E-32 237.3 1.5 239 4-284 27-324 (327)
71 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.4E-25 4.9E-30 196.8 15.3 124 29-196 4-127 (162)
72 2y1l_E Darpin-8.4; hydrolase-i 99.9 3E-25 1E-29 197.1 17.1 148 29-227 13-161 (169)
73 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.9E-25 6.6E-30 195.0 15.3 148 30-228 2-149 (156)
74 2vge_A RELA-associated inhibit 99.9 1.3E-28 4.3E-33 231.3 -5.4 146 12-200 1-152 (229)
75 1bi7_B P16INK4A, MTS1, multipl 99.9 7.6E-27 2.6E-31 205.0 6.3 134 25-203 8-143 (156)
76 2jab_A H10-2-G3; HER2, darpin, 99.9 1.5E-25 5.2E-30 192.1 14.2 122 29-193 13-134 (136)
77 1awc_B Protein (GA binding pro 99.9 3.9E-25 1.3E-29 193.0 15.7 147 30-228 2-149 (153)
78 3hra_A Ankyrin repeat family p 99.9 1.1E-24 3.7E-29 197.8 19.0 179 29-228 4-194 (201)
79 3f6q_A Integrin-linked protein 99.9 2.1E-24 7.2E-29 193.3 18.0 164 29-273 4-168 (179)
80 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.8E-25 3E-29 182.8 14.5 122 29-193 1-122 (126)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 3.1E-25 1.1E-29 194.6 11.2 135 1-180 17-152 (156)
82 3deo_A Signal recognition part 99.9 6.9E-26 2.4E-30 204.3 6.4 139 2-185 6-156 (183)
83 3twr_A Tankyrase-2; ankyrin re 99.9 3.6E-24 1.2E-28 188.9 16.4 130 29-200 7-137 (165)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-24 4E-29 186.6 12.4 118 1-162 19-136 (136)
85 2vge_A RELA-associated inhibit 99.9 7.4E-25 2.5E-29 205.5 12.0 178 1-229 26-205 (229)
86 1d9s_A Cyclin-dependent kinase 99.9 2.5E-25 8.7E-30 190.7 7.5 119 1-164 17-136 (136)
87 3aaa_C Myotrophin, protein V-1 99.9 8.5E-24 2.9E-28 177.8 14.3 117 29-191 6-122 (123)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.8E-24 1.6E-28 178.3 12.3 120 1-164 7-126 (126)
89 2b0o_E UPLC1; arfgap, structur 99.9 8.2E-25 2.8E-29 213.8 8.3 147 29-225 150-299 (301)
90 4hbd_A KN motif and ankyrin re 99.9 5.1E-24 1.7E-28 205.0 10.7 179 30-228 76-266 (276)
91 3ui2_A Signal recognition part 99.9 1.5E-24 5.2E-29 205.0 6.3 109 29-181 44-153 (244)
92 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.6E-25 2.2E-29 206.4 3.5 141 1-184 42-193 (239)
93 3ehr_A Osteoclast-stimulating 99.9 1.5E-23 5E-28 194.3 9.9 125 29-196 72-197 (222)
94 3lvq_E ARF-GAP with SH3 domain 99.9 3.9E-23 1.3E-27 215.3 11.9 122 2-167 138-268 (497)
95 3t8k_A Uncharacterized protein 99.9 1.7E-23 5.7E-28 190.3 7.1 146 29-227 5-169 (186)
96 3ehr_A Osteoclast-stimulating 99.9 1.8E-23 6.3E-28 193.7 6.2 129 1-173 78-207 (222)
97 2b0o_E UPLC1; arfgap, structur 99.9 1.9E-22 6.6E-27 197.0 10.1 141 1-185 156-299 (301)
98 3c5r_A BARD-1, BRCA1-associate 99.9 4.9E-23 1.7E-27 176.3 4.7 120 1-164 15-134 (137)
99 3jue_A Arfgap with coiled-coil 99.9 5E-22 1.7E-26 199.5 12.0 123 29-194 198-323 (368)
100 3aaa_C Myotrophin, protein V-1 99.9 2.2E-22 7.5E-27 169.1 7.6 106 1-150 12-117 (123)
101 2aja_A Ankyrin repeat family p 99.9 2E-24 6.9E-29 217.5 -6.1 144 1-165 97-251 (376)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.8E-21 6.1E-26 155.6 12.2 93 29-164 1-93 (93)
103 3jue_A Arfgap with coiled-coil 99.9 9.8E-22 3.4E-26 197.3 12.3 117 95-227 198-316 (368)
104 1dcq_A PYK2-associated protein 99.9 2.5E-21 8.4E-26 187.0 13.0 130 30-196 130-262 (278)
105 2l6b_A NR1C; ankyrin, consensu 99.8 1.1E-21 3.7E-26 162.7 8.4 108 25-176 5-112 (115)
106 1dcq_A PYK2-associated protein 99.8 2.6E-21 8.9E-26 186.8 12.3 120 2-165 136-264 (278)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.8 5.2E-21 1.8E-25 152.9 11.0 90 95-194 1-90 (93)
108 2aja_A Ankyrin repeat family p 99.8 9.2E-23 3.2E-27 205.4 0.8 163 6-194 76-247 (376)
109 3lvq_E ARF-GAP with SH3 domain 99.8 7.8E-21 2.7E-25 198.0 14.3 134 29-199 131-268 (497)
110 3deo_A Signal recognition part 99.8 4.8E-21 1.6E-25 172.4 9.5 132 1-194 49-181 (183)
111 3ui2_A Signal recognition part 99.8 2.6E-21 9E-26 182.7 7.8 131 1-193 50-181 (244)
112 2zgd_A 3 repeat synthetic anky 99.8 2.7E-19 9.2E-24 147.8 11.1 94 89-192 17-110 (110)
113 2l6b_A NR1C; ankyrin, consensu 99.8 2.3E-19 7.8E-24 148.6 7.9 101 91-201 4-105 (115)
114 2zgd_A 3 repeat synthetic anky 99.7 7.8E-18 2.7E-22 138.9 10.8 92 23-158 18-109 (110)
115 2vje_A E3 ubiquitin-protein li 97.6 9.3E-06 3.2E-10 59.9 0.5 53 233-297 6-61 (64)
116 2ea5_A Cell growth regulator w 97.5 2.4E-05 8.3E-10 58.4 1.7 52 232-299 12-64 (68)
117 2vje_B MDM4 protein; proto-onc 97.5 1.5E-05 5.2E-10 58.5 0.1 51 235-297 7-60 (63)
118 2yho_A E3 ubiquitin-protein li 97.2 7.1E-05 2.4E-09 57.5 0.6 48 236-299 19-67 (79)
119 4ic3_A E3 ubiquitin-protein li 97.2 5.8E-05 2E-09 57.2 0.0 46 236-297 25-71 (74)
120 2egp_A Tripartite motif-contai 97.1 0.00024 8E-09 54.0 3.2 57 232-293 9-65 (79)
121 2ecg_A Baculoviral IAP repeat- 97.1 9.7E-05 3.3E-09 56.0 0.9 46 236-297 26-72 (75)
122 2ecw_A Tripartite motif-contai 97.1 0.0004 1.4E-08 53.3 3.8 55 233-293 17-71 (85)
123 2ep4_A Ring finger protein 24; 97.0 0.00023 8E-09 53.5 2.3 57 232-300 12-71 (74)
124 2ysl_A Tripartite motif-contai 96.8 0.00048 1.6E-08 51.5 2.1 52 232-292 17-68 (73)
125 4ayc_A E3 ubiquitin-protein li 96.7 0.00035 1.2E-08 59.4 1.1 46 237-294 55-100 (138)
126 2djb_A Polycomb group ring fin 96.7 0.0008 2.7E-08 50.3 2.9 52 232-295 12-64 (72)
127 2d8t_A Dactylidin, ring finger 96.7 0.0004 1.4E-08 51.8 0.8 48 234-293 14-61 (71)
128 2kiz_A E3 ubiquitin-protein li 96.6 0.00075 2.6E-08 49.9 2.1 52 232-295 11-65 (69)
129 2ecm_A Ring finger and CHY zin 96.6 0.00041 1.4E-08 48.7 0.6 47 234-292 4-54 (55)
130 2ecv_A Tripartite motif-contai 96.6 0.001 3.6E-08 50.9 3.0 55 233-293 17-71 (85)
131 2ea6_A Ring finger protein 4; 96.6 0.00071 2.4E-08 49.8 1.8 49 232-292 12-67 (69)
132 1chc_A Equine herpes virus-1 r 96.6 0.00043 1.5E-08 51.0 0.4 53 234-298 4-57 (68)
133 2ct2_A Tripartite motif protei 96.5 0.0013 4.5E-08 50.8 3.2 52 232-292 12-67 (88)
134 1iym_A EL5; ring-H2 finger, ub 96.5 0.00061 2.1E-08 47.9 1.0 48 233-292 3-54 (55)
135 2ecn_A Ring finger protein 141 96.5 0.00059 2E-08 50.6 0.8 51 232-295 12-62 (70)
136 2ecy_A TNF receptor-associated 96.4 0.0016 5.6E-08 47.6 3.0 49 233-292 13-61 (66)
137 3ng2_A RNF4, snurf, ring finge 96.4 0.00074 2.5E-08 50.1 0.9 49 232-292 7-62 (71)
138 1jm7_A BRCA1, breast cancer ty 96.4 0.00085 2.9E-08 54.5 1.1 49 236-293 22-70 (112)
139 3ztg_A E3 ubiquitin-protein li 96.3 0.002 6.8E-08 50.4 2.9 50 233-292 11-61 (92)
140 2ect_A Ring finger protein 126 96.2 0.00082 2.8E-08 50.9 0.3 55 233-299 13-70 (78)
141 1e4u_A Transcriptional repress 96.2 0.0028 9.6E-08 48.4 3.1 50 233-293 9-62 (78)
142 2l0b_A E3 ubiquitin-protein li 96.2 0.0012 4.3E-08 51.7 1.1 48 233-292 38-88 (91)
143 2xeu_A Ring finger protein 4; 96.1 0.0011 3.6E-08 48.0 0.5 47 235-293 3-56 (64)
144 2csy_A Zinc finger protein 183 96.1 0.0015 5.3E-08 49.9 1.4 47 234-292 14-60 (81)
145 3fl2_A E3 ubiquitin-protein li 96.1 0.0016 5.6E-08 54.1 1.4 47 236-293 53-99 (124)
146 3lrq_A E3 ubiquitin-protein li 96.0 0.0016 5.4E-08 52.1 1.0 47 235-292 22-69 (100)
147 2y1n_A E3 ubiquitin-protein li 96.0 0.0021 7.3E-08 63.7 2.1 54 235-299 332-385 (389)
148 1x4j_A Ring finger protein 38; 96.0 0.0013 4.5E-08 49.4 0.3 48 233-292 21-71 (75)
149 1bor_A Transcription factor PM 96.0 0.00053 1.8E-08 48.8 -1.9 44 234-292 5-48 (56)
150 1t1h_A Gspef-atpub14, armadill 95.9 0.0016 5.5E-08 49.3 0.4 58 234-302 7-64 (78)
151 1z6u_A NP95-like ring finger p 95.8 0.0025 8.4E-08 55.0 1.3 48 236-294 79-126 (150)
152 2yur_A Retinoblastoma-binding 95.7 0.0017 5.7E-08 48.9 -0.0 49 234-292 14-63 (74)
153 1g25_A CDK-activating kinase a 95.7 0.0026 8.9E-08 46.3 1.0 46 236-292 4-54 (65)
154 2y43_A E3 ubiquitin-protein li 95.6 0.0031 1.1E-07 50.1 1.1 46 236-293 23-69 (99)
155 4ap4_A E3 ubiquitin ligase RNF 95.6 0.0047 1.6E-07 51.3 2.3 72 233-322 5-83 (133)
156 1v87_A Deltex protein 2; ring- 95.6 0.0046 1.6E-07 50.4 2.1 52 235-293 25-94 (114)
157 3t6p_A Baculoviral IAP repeat- 95.5 0.0014 4.7E-08 64.5 -1.8 48 235-298 295-343 (345)
158 3l11_A E3 ubiquitin-protein li 95.4 0.0022 7.5E-08 52.5 -0.6 47 236-293 16-62 (115)
159 2ckl_A Polycomb group ring fin 95.2 0.0046 1.6E-07 50.0 0.8 47 235-293 15-62 (108)
160 2ckl_B Ubiquitin ligase protei 95.1 0.0049 1.7E-07 53.8 0.9 48 236-294 55-103 (165)
161 3hct_A TNF receptor-associated 95.1 0.0071 2.4E-07 49.7 1.6 58 231-299 14-71 (118)
162 2ecl_A Ring-box protein 2; RNF 94.7 0.0084 2.9E-07 45.8 1.0 46 235-292 15-75 (81)
163 2ecj_A Tripartite motif-contai 94.6 0.019 6.6E-07 40.3 2.8 47 232-287 12-58 (58)
164 2ysj_A Tripartite motif-contai 94.5 0.015 5.1E-07 41.8 2.0 47 232-287 17-63 (63)
165 1rmd_A RAG1; V(D)J recombinati 94.3 0.012 4E-07 48.1 1.2 48 236-294 24-71 (116)
166 1jm7_B BARD1, BRCA1-associated 93.9 0.0051 1.7E-07 50.5 -1.8 43 236-292 23-66 (117)
167 3knv_A TNF receptor-associated 93.4 0.011 3.7E-07 50.4 -0.8 49 232-291 28-76 (141)
168 4ap4_A E3 ubiquitin ligase RNF 92.6 0.026 9E-07 46.7 0.5 49 233-293 70-125 (133)
169 3dpl_R Ring-box protein 1; ubi 92.0 0.036 1.2E-06 44.7 0.6 46 234-291 36-99 (106)
170 3hcs_A TNF receptor-associated 91.8 0.049 1.7E-06 47.5 1.3 53 231-294 14-66 (170)
171 4a0k_B E3 ubiquitin-protein li 91.2 0.043 1.5E-06 45.1 0.3 46 234-291 47-110 (117)
172 1wim_A KIAA0161 protein; ring 90.2 0.037 1.3E-06 43.3 -1.0 53 234-290 4-61 (94)
173 2kr4_A Ubiquitin conjugation f 90.1 0.061 2.1E-06 41.4 0.2 56 233-300 12-67 (85)
174 2c2l_A CHIP, carboxy terminus 89.8 0.034 1.2E-06 52.2 -1.8 58 234-302 207-264 (281)
175 2kre_A Ubiquitin conjugation f 88.0 0.054 1.8E-06 43.2 -1.5 54 234-299 28-81 (100)
176 1wgm_A Ubiquitin conjugation f 86.7 0.097 3.3E-06 41.5 -0.7 55 234-300 21-76 (98)
177 2d8s_A Cellular modulator of i 86.2 0.22 7.6E-06 37.8 1.1 56 232-297 12-74 (80)
178 2f42_A STIP1 homology and U-bo 80.9 0.21 7.2E-06 44.1 -1.1 58 234-302 105-162 (179)
179 2yu4_A E3 SUMO-protein ligase 79.6 0.35 1.2E-05 37.7 -0.2 63 234-302 6-72 (94)
180 3vk6_A E3 ubiquitin-protein li 78.8 0.68 2.3E-05 36.5 1.3 40 248-298 15-54 (101)
181 3htk_C E3 SUMO-protein ligase 78.3 0.6 2.1E-05 43.6 1.0 59 231-299 177-238 (267)
182 2ct0_A Non-SMC element 1 homol 60.6 4.9 0.00017 29.8 2.4 51 232-292 12-63 (74)
183 1p1p_A AA-conotoxin PIVA; neur 55.7 8 0.00027 21.8 2.1 18 353-370 3-20 (26)
184 3k1l_B Fancl; UBC, ring, RWD, 55.1 3.3 0.00011 40.1 0.8 55 233-292 306-372 (381)
185 1vyx_A ORF K3, K3RING; zinc-bi 46.7 18 0.00061 25.4 3.4 46 233-291 4-57 (60)
186 3zrh_A Ubiquitin thioesterase 27.5 70 0.0024 31.6 5.1 48 4-51 30-90 (454)
187 2co8_A NEDD9 interacting prote 23.8 1.7E+02 0.0058 21.2 5.8 61 279-342 13-79 (82)
188 1jlp_A PSI-conotoxin PIIIF; mu 23.4 25 0.00084 19.7 0.6 7 352-358 9-15 (26)
189 3zrh_A Ubiquitin thioesterase 21.9 2E+02 0.0067 28.4 7.1 56 102-160 28-90 (454)
No 1
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3.6e-34 Score=282.36 Aligned_cols=251 Identities=20% Similarity=0.120 Sum_probs=191.7
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC------------------------
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS------------------------ 56 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~------------------------ 56 (431)
|.||+.|++++|++||++|+++|.++...|+||||+|+..|+.++|++|+++++..
T Consensus 30 ~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 4g8k_A 30 IKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLK 109 (337)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhH
Confidence 57999999999999999999999988757999999999999999999999877642
Q ss_pred ------------CCCCcchhhHhhhcCChhhHHhhhhhhhhh-------hhhcccCCCCchHHHHHHHcCCHHHHHHHHH
Q 014068 57 ------------VPFEVMNTQIEGDRGDGSSVKSKCDQSALS-------KFVNKAADGGITALHMAALNGYFDCVQLLLD 117 (431)
Q Consensus 57 ------------~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~-------~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~ 117 (431)
+..+.++++.++..+....+..++..+... ...+..+..|.||||+|+..|+.++|++||+
T Consensus 110 ~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~ 189 (337)
T 4g8k_A 110 LFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 189 (337)
T ss_dssp HHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHh
Confidence 345667888888888888887776554321 1233455678899999999999999999995
Q ss_pred -CCCCCCcccccCCCccccCCCCCcHHHHHHhcCC----HHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhc
Q 014068 118 -LHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGN----LKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLA 192 (431)
Q Consensus 118 -~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~----~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~ 192 (431)
.|++++..+.. |.|+||+++..++ .+++++|+++|+++|.+|..|+||||+|+..|+.+++++|.
T Consensus 190 ~~gad~n~~d~~----------g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll 259 (337)
T 4g8k_A 190 EMGADVNACDNM----------GRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 259 (337)
T ss_dssp HSCCCTTCCCTT----------SCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred ccCCCcCccCCC----------CCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHH
Confidence 68999988866 8899988776443 45889999999999999999999999999999999877766
Q ss_pred C--CCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccccccCCC-CCchhhhhhccccchhccCCChHHHHHHHHHhhhcC
Q 014068 193 P--SSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTTSSSD-DADTCAVCLERACTVAAEGCRHELCVRCALYLCSTN 269 (431)
Q Consensus 193 ~--~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~a~~~-~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~ 269 (431)
. +.+++..+..+ .|+|++|.+.|..+++..... +-+ +-...++..|+.. ||..++++|++.||++
T Consensus 260 ~~~~~~vn~~d~~G--------~TpL~~A~~~g~~~iv~~Ll~~GAd---~n~~~~L~~A~~~-~~~~iv~~Ll~~GA~~ 327 (337)
T 4g8k_A 260 EQEHIEINDTDSDG--------KTALLLAVELKLKKIAELLCKRGAS---TDCGDLVMTARRN-YDHSLVKVLLSHGAKE 327 (337)
T ss_dssp TSTTCCTTCBCTTS--------CBHHHHHHHTTCHHHHHHHHTTSCS---STTCCHHHHHHHT-TCHHHHHHHHHTTCCC
T ss_pred HhcCCcccCcCCCC--------CCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCHHHHHHHc-CCHHHHHHHHHCcCCC
Confidence 5 45555544333 388999999998776653211 111 1112466777777 8888999999999999
Q ss_pred CCCC
Q 014068 270 NIPS 273 (431)
Q Consensus 270 n~~~ 273 (431)
++.+
T Consensus 328 d~~~ 331 (337)
T 4g8k_A 328 DFHP 331 (337)
T ss_dssp ----
T ss_pred CCCC
Confidence 8644
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.9e-34 Score=255.71 Aligned_cols=153 Identities=35% Similarity=0.482 Sum_probs=141.8
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|.||+.|+.++|++||++|+|+|.+|. .|+||||+|+..|+.+++++|++.+++
T Consensus 9 ~~Aa~~G~~~~v~~Ll~~Gadvn~~d~-~g~t~l~~a~~~~~~~~~~~ll~~gad------------------------- 62 (169)
T 4gpm_A 9 IEAAENGNKDRVKDLIENGADVNASDS-DGRTPLHHAAENGHKEVVKLLISKGAD------------------------- 62 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHhcccc-------------------------
Confidence 468999999999999999999999998 999999999999999999999988765
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 160 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~ 160 (431)
++.+|..|.||||+|+..|+.++|++||++|+++|.+|.. |+||||+|+..|+.++|++|++
T Consensus 63 --------~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~----------G~TpLh~A~~~g~~~~v~~Ll~ 124 (169)
T 4gpm_A 63 --------VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD----------GRTPLHHAAENGHKEVVKLLIS 124 (169)
T ss_dssp --------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------hhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCC----------CCCHHHHHHHcCCHHHHHHHHH
Confidence 7889999999999999999999999999999999999976 9999999999999999999999
Q ss_pred CCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcC-CCCC
Q 014068 161 RGASRMSLNCNGWLPLDVARMWGRHWLEPLLAP-SSDA 197 (431)
Q Consensus 161 ~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~-~a~~ 197 (431)
+|++++.+|.+|+||||+|+.+|+.+++++|++ |+++
T Consensus 125 ~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 125 KGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 999999999999999999999999999876654 5554
No 3
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.1e-33 Score=279.87 Aligned_cols=210 Identities=19% Similarity=0.106 Sum_probs=184.9
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCC-CCcchhhHhhhcCChhhHHhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVP-FEVMNTQIEGDRGDGSSVKSK 79 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~-~~~~~l~~a~~~~~~~~~~~~ 79 (431)
|+||..|+.++|++|+++|++++..|. .|.||||+|+..|+.++|++|++.+...+. .+.+++++++..++.+.+..+
T Consensus 25 ~~Aa~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~L 103 (364)
T 3ljn_A 25 HVAARKGQTDEVRRLIETGVSPTIQNR-FGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVAL 103 (364)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHH
Confidence 679999999999999999999999998 999999999999999999999998886665 789999999999999999988
Q ss_pred hhhhhh-hhhh-----------------cccCCCCchHHHHHHHcC--CHHHHHHHHHCCCCCCcccccCCCccccCCCC
Q 014068 80 CDQSAL-SKFV-----------------NKAADGGITALHMAALNG--YFDCVQLLLDLHANVSAVTFHYGTSMDLIGAG 139 (431)
Q Consensus 80 ~~~~~~-~~~i-----------------n~~d~~G~TpLh~Aa~~g--~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G 139 (431)
+..... ...+ +.+|..|.||||+|+..| +.++|++|+++|++++..+.. |
T Consensus 104 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~----------g 173 (364)
T 3ljn_A 104 VEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKA----------D 173 (364)
T ss_dssp HHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTT----------S
T ss_pred HHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCC----------C
Confidence 876221 1122 337889999999999999 999999999999999999976 9
Q ss_pred CcHHHHHHhcCCHHHHHHHHHCCCC-----CcccCCCCCcHHHHHHHhCcHHHHHHhc-CCCCCCCCCCCCCCCCchhhh
Q 014068 140 STPLHFAACGGNLKCCQVLLSRGAS-----RMSLNCNGWLPLDVARMWGRHWLEPLLA-PSSDAVMPRFHPSNYLSLPLL 213 (431)
Q Consensus 140 ~TpLh~Aa~~g~~eivklLL~~GAd-----in~~d~~G~TpLh~Aa~~g~~~v~~LL~-~~a~~~~~~~~~~~~~~~~l~ 213 (431)
.||||+|+..|+.++|++|+++|++ ++..|..|+||||+|+..|+.+++++|+ .+++++..+..+.
T Consensus 174 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~-------- 245 (364)
T 3ljn_A 174 ETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHT-------- 245 (364)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSC--------
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC--------
Confidence 9999999999999999999999999 9999999999999999999999976655 5677766554433
Q ss_pred hHHHHHHHcCCccccc
Q 014068 214 SVLNVARECGLLSSTT 229 (431)
Q Consensus 214 t~l~~A~~~G~~~~~~ 229 (431)
|+|++|...|..+++.
T Consensus 246 tpL~~A~~~g~~~~v~ 261 (364)
T 3ljn_A 246 VPLYLSVRAAMVLLTK 261 (364)
T ss_dssp CHHHHHHHTCCHHHHH
T ss_pred CHHHHHHHhChHHHHH
Confidence 8899999998776664
No 4
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.5e-32 Score=258.88 Aligned_cols=209 Identities=20% Similarity=0.148 Sum_probs=162.2
Q ss_pred CEeeccC-------------CHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchh
Q 014068 1 MQACRYG-------------HWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNT 64 (431)
Q Consensus 1 H~Aa~~G-------------~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l 64 (431)
|+|+..| +.++|++|+++|++++...+..|+||||+|+..|+.++|++|++.++.. +..+.+++
T Consensus 15 ~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L 94 (253)
T 1yyh_A 15 MIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPL 94 (253)
T ss_dssp -------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 6788877 9999999999999997764349999999999999999999999987754 45678999
Q ss_pred hHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHH
Q 014068 65 QIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLH 144 (431)
Q Consensus 65 ~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh 144 (431)
++++..+..+.+..++..... .++.++..|.||||+|+..|+.+++++|+++|++++..+.. |.||||
T Consensus 95 ~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~----------g~t~L~ 162 (253)
T 1yyh_A 95 HAAVSADAQGVFQILIRNRAT--DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL----------GKSALH 162 (253)
T ss_dssp HHHHHHTCHHHHHHHHHSTTS--CTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTT----------SCBHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC--CccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCC----------CCCHHH
Confidence 999999999999888776432 37888999999999999999999999999999999999976 999999
Q ss_pred HHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHh-cCCCCCCCCCCCCCCCCchhhhhHHHHHHHcC
Q 014068 145 FAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLL-APSSDAVMPRFHPSNYLSLPLLSVLNVARECG 223 (431)
Q Consensus 145 ~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL-~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G 223 (431)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++| ..+++++..+..+. +++++|.+.|
T Consensus 163 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~--------tpl~~A~~~g 234 (253)
T 1yyh_A 163 WAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDR--------LPRDIAQERM 234 (253)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCC--------CHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCC--------CHHHHHHHcC
Confidence 99999999999999999999999999999999999999999997655 45677766554433 8899999988
Q ss_pred Cccccc
Q 014068 224 LLSSTT 229 (431)
Q Consensus 224 ~~~~~~ 229 (431)
+.+++.
T Consensus 235 ~~~i~~ 240 (253)
T 1yyh_A 235 HHDIVR 240 (253)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 877765
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=8.6e-32 Score=256.25 Aligned_cols=261 Identities=20% Similarity=0.091 Sum_probs=211.0
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC---CCCCCcchhhHhhhcCChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVP---SVPFEVMNTQIEGDRGDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~---~~~~~~~~l~~a~~~~~~~~~~ 77 (431)
|+|+..|+.++|++|+++|++++..+...|+||||+|+..|+.+++++|++.+.. .+..+.+++++++..+..+.++
T Consensus 10 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 89 (285)
T 1wdy_A 10 IKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLK 89 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHH
Confidence 5789999999999999999999988545899999999999999999999998765 3466889999999999999999
Q ss_pred hhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHH
Q 014068 78 SKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQV 157 (431)
Q Consensus 78 ~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivkl 157 (431)
.++..+ ..++.+|..|.||||+|+..|+.+++++|+++|++++..+............|.||||+|+..|+.+++++
T Consensus 90 ~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 166 (285)
T 1wdy_A 90 LFLSKG---ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKI 166 (285)
T ss_dssp HHHHTT---CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHcC---CCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHH
Confidence 888764 34788899999999999999999999999999999987732100000001249999999999999999999
Q ss_pred HHHC-CCCCcccCCCCCcHHHHHHHhCc----HHHHHHh-cCCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccccccC
Q 014068 158 LLSR-GASRMSLNCNGWLPLDVARMWGR----HWLEPLL-APSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTTSS 231 (431)
Q Consensus 158 LL~~-GAdin~~d~~G~TpLh~Aa~~g~----~~v~~LL-~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~a~ 231 (431)
|+++ |++++..|..|+||||+|+..++ .+++++| ..+++++..+..+. |++++|...|..+++...
T Consensus 167 Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~--------t~L~~A~~~~~~~~v~~L 238 (285)
T 1wdy_A 167 LLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGK--------TPLILAVEKKHLGLVQRL 238 (285)
T ss_dssp HHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSC--------CHHHHHHHTTCHHHHHHH
T ss_pred HHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCC--------cHHHHHHHcCCHHHHHHH
Confidence 9998 99999999999999999999998 7886655 55666666544433 789999998876654421
Q ss_pred C----CCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCC
Q 014068 232 S----DDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPS 273 (431)
Q Consensus 232 ~----~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~ 273 (431)
. ...........++...|+.. ||..+++.|++.|++++..+
T Consensus 239 l~~~g~~~~~~~~~g~t~l~~A~~~-~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 239 LEQEHIEINDTDSDGKTALLLAVEL-KLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp HHSSSCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHSSCSCCSS
T ss_pred HhccCCCccccCCCCCcHHHHHHHc-CcHHHHHHHHHcCCCCCccc
Confidence 1 11111122335778888888 99999999999999998654
No 6
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.4e-32 Score=259.69 Aligned_cols=205 Identities=21% Similarity=0.151 Sum_probs=169.7
Q ss_pred CEeeccCCHHHHHHHHHcCCC---CcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCChh
Q 014068 1 MQACRYGHWEVVQTLLLFRCN---VTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGS 74 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gad---i~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~~~ 74 (431)
|+||..|+.++|++|+++|++ ++..+. .|+||||+|+..|+.+++++|+++++.. +..+.+++++++..+...
T Consensus 14 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~ 92 (282)
T 1oy3_D 14 HLAVIHQHEPFLDFLLGFSAGHEYLDLQND-LGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHT 92 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTSGGGGCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHH
T ss_pred HHHHHcCCHHHHHHHHhcCCCcccccccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcc
Confidence 689999999999999999998 778887 9999999999999999999999987754 456889999999999999
Q ss_pred hHHhhhhhhhh--------------------------------------------hhhhcccCCCCchHHHHHHHcCCHH
Q 014068 75 SVKSKCDQSAL--------------------------------------------SKFVNKAADGGITALHMAALNGYFD 110 (431)
Q Consensus 75 ~~~~~~~~~~~--------------------------------------------~~~in~~d~~G~TpLh~Aa~~g~~e 110 (431)
.+..++..... ...++.++..|.||||+|+..|+.+
T Consensus 93 ~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~ 172 (282)
T 1oy3_D 93 CACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAE 172 (282)
T ss_dssp HHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHH
T ss_pred hhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHH
Confidence 99888764321 2347788999999999999999999
Q ss_pred HHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHH
Q 014068 111 CVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPL 190 (431)
Q Consensus 111 ~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~L 190 (431)
+|++|+++|++++..+.. .|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++
T Consensus 173 ~v~~Ll~~g~~~~~~~~~---------~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 243 (282)
T 1oy3_D 173 MVRLLRDAGADLNKPEPT---------CGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARL 243 (282)
T ss_dssp HHHHHHHHTCCTTCCCTT---------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCC---------CCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHH
Confidence 999999999999998743 39999999999999999999999999999999999999999999999999765
Q ss_pred h-cCCCCCCCCCCCCCCCCchhhhhHHHHHHHcC
Q 014068 191 L-APSSDAVMPRFHPSNYLSLPLLSVLNVARECG 223 (431)
Q Consensus 191 L-~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G 223 (431)
| ..+++++.....+. |+++++....
T Consensus 244 Ll~~ga~~~~~~~~g~--------tpl~~a~~~~ 269 (282)
T 1oy3_D 244 LRAHGAPEPEDGGDKL--------SPCSSSGSDS 269 (282)
T ss_dssp HHHTTCCCCCCC----------------------
T ss_pred HHHcCCCcCcCCCccc--------ccccccCCcc
Confidence 5 56777766544433 6677766644
No 7
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.98 E-value=1.4e-31 Score=249.77 Aligned_cols=203 Identities=22% Similarity=0.214 Sum_probs=180.0
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC---CCCCCcchhhHhhhcCChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVP---SVPFEVMNTQIEGDRGDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~---~~~~~~~~l~~a~~~~~~~~~~ 77 (431)
|+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++.+.. .+..+.++++.++..+..+.+.
T Consensus 16 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 94 (237)
T 3b7b_A 16 HAAAEAGHVDICHMLVQAGANIDTCSE-DQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQ 94 (237)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCcCccCC-CCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Confidence 579999999999999999999999997 999999999999999999999998764 4566789999999999999999
Q ss_pred hhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHH
Q 014068 78 SKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQV 157 (431)
Q Consensus 78 ~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivkl 157 (431)
.++.... ..++..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++
T Consensus 95 ~Ll~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~~~~ 162 (237)
T 3b7b_A 95 YLLSNGQ--MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNE----------ENICLHWAAFSGCVDIAEI 162 (237)
T ss_dssp HHHTTTC--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHHCCHHHHHH
T ss_pred HHHhCCC--CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCC----------CCCHHHHHHHCCCHHHHHH
Confidence 8887652 247888999999999999999999999999999999998876 9999999999999999999
Q ss_pred HHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHh-cCCCCCCCCCCCCCCCCchhhhhHHHHHHHcCC
Q 014068 158 LLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLL-APSSDAVMPRFHPSNYLSLPLLSVLNVARECGL 224 (431)
Q Consensus 158 LL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL-~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~ 224 (431)
|+++|++++.+|..|+||||+|+..|+.+++++| ..+++++..+..+. |++++|...|.
T Consensus 163 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~--------t~l~~A~~~~~ 222 (237)
T 3b7b_A 163 LLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGE--------TPLQCASLNSQ 222 (237)
T ss_dssp HHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSC--------CHHHHSCTTCH
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCC--------CHHHHHHHHHH
Confidence 9999999999999999999999999999997655 55677666554433 77888776654
No 8
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.98 E-value=6.9e-32 Score=275.12 Aligned_cols=280 Identities=23% Similarity=0.220 Sum_probs=182.0
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC---CCCCCcchhhHhhhcCChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVP---SVPFEVMNTQIEGDRGDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~---~~~~~~~~l~~a~~~~~~~~~~ 77 (431)
|+||..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++++.. .+..+.++++.|+..++.+.++
T Consensus 19 ~~Aa~~g~~~~v~~Ll~~g~~~~~~~~-~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~ 97 (437)
T 1n11_A 19 HVASFMGHLPIVKNLLQRGASPNVSNV-KVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVK 97 (437)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSCCSSS-CCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 568888888888888888888888876 888888888888888888888887664 3456778888888888888888
Q ss_pred hhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHH
Q 014068 78 SKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQV 157 (431)
Q Consensus 78 ~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivkl 157 (431)
.++..+. .++..+..|.||||+|+..|+.++|++|++++++++..+.. |.||||+|+..|+.+++++
T Consensus 98 ~Ll~~ga---~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~----------g~t~L~~A~~~g~~~~v~~ 164 (437)
T 1n11_A 98 LLLENNA---NPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKK----------GFTPLHVAAKYGKVRVAEL 164 (437)
T ss_dssp HHHHHTC---CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT----------SCCHHHHHHHTTCHHHHHH
T ss_pred HHHhCCC---CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCC----------CCCHHHHHHHcCCHHHHHH
Confidence 7776542 46677777888888888888888888888888877776654 7777777777777777777
Q ss_pred HHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcC-CCCCCCCCCCCCCC-------------------------Cchh
Q 014068 158 LLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAP-SSDAVMPRFHPSNY-------------------------LSLP 211 (431)
Q Consensus 158 LL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~-~a~~~~~~~~~~~~-------------------------~~~~ 211 (431)
|+++|++++..+..|.||||+|+..|+.+++++|.. +++++.....+... ....
T Consensus 165 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 244 (437)
T 1n11_A 165 LLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ 244 (437)
T ss_dssp HHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Confidence 777777777777777777777777777777655543 33333322221100 0001
Q ss_pred hhhHHHHHHHcCCccccccCC---CCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccc
Q 014068 212 LLSVLNVARECGLLSSTTSSS---DDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCR 288 (431)
Q Consensus 212 l~t~l~~A~~~G~~~~~~a~~---~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr 288 (431)
..+++++|...|..+++.... .+.........++...|+.. ||..+++.|++.|++.+..+..+.+|.+.++-.-+
T Consensus 245 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 323 (437)
T 1n11_A 245 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQE-GHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGN 323 (437)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHH-TCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSC
T ss_pred CCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCc
Confidence 123444444444433332100 00000111112345555555 66666777777777666666666666555555545
Q ss_pred cccccce
Q 014068 289 HGIVSFT 295 (431)
Q Consensus 289 ~~I~~~~ 295 (431)
-.|+++.
T Consensus 324 ~~~v~~L 330 (437)
T 1n11_A 324 IKLVKFL 330 (437)
T ss_dssp SHHHHHH
T ss_pred HHHHHHH
Confidence 5555553
No 9
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=8.3e-32 Score=274.54 Aligned_cols=282 Identities=23% Similarity=0.213 Sum_probs=210.7
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC---CCCCCcchhhHhhhcCChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVP---SVPFEVMNTQIEGDRGDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~---~~~~~~~~l~~a~~~~~~~~~~ 77 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.++|++|+++++. .+..+.+++++++..+..+.+.
T Consensus 52 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~ 130 (437)
T 1n11_A 52 HMAARAGHTEVAKYLLQNKAKVNAKAK-DDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVL 130 (437)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSSCCCT-TSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Confidence 578889999999999999999988887 899999999999999999999987764 3456778888888888888887
Q ss_pred hhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccC---------------------
Q 014068 78 SKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLI--------------------- 136 (431)
Q Consensus 78 ~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~--------------------- 136 (431)
.++.... .++..+..|.||||+|+..|+.+++++|+++|++++..+..+.++++.+
T Consensus 131 ~Ll~~~~---~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 207 (437)
T 1n11_A 131 ALLEKEA---SQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHS 207 (437)
T ss_dssp HHHHTTC---CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCC
T ss_pred HHHhCCC---CCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 7765532 2455566677777777777777777777777777766665433322211
Q ss_pred --CCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhc-CCCCCCCCCCCCCCCCchhhh
Q 014068 137 --GAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLA-PSSDAVMPRFHPSNYLSLPLL 213 (431)
Q Consensus 137 --~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~-~~a~~~~~~~~~~~~~~~~l~ 213 (431)
..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|. .+++.+.....+ .
T Consensus 208 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g--------~ 279 (437)
T 1n11_A 208 PAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSG--------L 279 (437)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTC--------C
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCC--------C
Confidence 24788888888888888999999988888888889999999999999988876654 455555544332 3
Q ss_pred hHHHHHHHcCCccccccC---CCCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccc
Q 014068 214 SVLNVARECGLLSSTTSS---SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHG 290 (431)
Q Consensus 214 t~l~~A~~~G~~~~~~a~---~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~ 290 (431)
+++++|...|..+++... ....+.....-.+++..|+.. |+..++++|++.|++++..+..+.+|.+.++-.-+.+
T Consensus 280 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~ 358 (437)
T 1n11_A 280 TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHY-GNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTD 358 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHS-SCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHc-CcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHH
Confidence 789999999987665421 111111112234677888887 8989999999999999998888888887777766667
Q ss_pred cccce
Q 014068 291 IVSFT 295 (431)
Q Consensus 291 I~~~~ 295 (431)
|+++.
T Consensus 359 iv~~L 363 (437)
T 1n11_A 359 IVTLL 363 (437)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
No 10
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=3.5e-31 Score=252.32 Aligned_cols=146 Identities=25% Similarity=0.309 Sum_probs=106.8
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+||..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|+++++.
T Consensus 8 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------- 61 (261)
T 2xai_A 8 HEAAIHGHQLSLRNLISQGWAVNIITA-DHVSPLHEACLGGHLSCVKILLKHGAQ------------------------- 61 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHCCCC-------------------------
Confidence 679999999999999999999999997 999999999999999999999988765
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 160 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~ 160 (431)
++.+|..|.||||+|+..|+.++|++|+++|++++..+ .|.||||+|+..|+.+++++|++
T Consensus 62 --------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~g~t~L~~A~~~~~~~~v~~Ll~ 122 (261)
T 2xai_A 62 --------VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-----------DLASPIHEAARRGHVECVNSLIA 122 (261)
T ss_dssp --------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-----------TTCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------CCCCHHHHHHHcCcHHHHHHHHH
Confidence 45555566666666666666666666666666655322 25566666666666666666666
Q ss_pred CCCCCcccCCCCCcHHHHHHHhCcHHHHHHh
Q 014068 161 RGASRMSLNCNGWLPLDVARMWGRHWLEPLL 191 (431)
Q Consensus 161 ~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL 191 (431)
+|++++..|..|+||||+|+..|+.+++++|
T Consensus 123 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 153 (261)
T 2xai_A 123 YGGNIDHKISHLGTPLYLACENQQRACVKKL 153 (261)
T ss_dssp TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred cCCCCCcCCCCCCCHHHHHHHhCCHHHHHHH
Confidence 6666666666666666666666666654444
No 11
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.5e-31 Score=249.68 Aligned_cols=211 Identities=23% Similarity=0.241 Sum_probs=178.8
Q ss_pred CEeeccCCHHHHHHHHH----cCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCCh
Q 014068 1 MQACRYGHWEVVQTLLL----FRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDG 73 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~----~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~~ 73 (431)
|+||..|+.++|++|++ .|++++..+. .|.||||+|+..|+.+++++|++.+... +..+.++++.++..+..
T Consensus 14 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 92 (241)
T 1k1a_A 14 HIAVVQGNLPAVHRLVNLFQQGGRELDIYNN-LRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSP 92 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCCCcccc-cCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 67999999999999997 7999999997 9999999999999999999999987653 55678999999999999
Q ss_pred hhHHhhhhhhhh-hhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCH
Q 014068 74 SSVKSKCDQSAL-SKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNL 152 (431)
Q Consensus 74 ~~~~~~~~~~~~-~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~ 152 (431)
..+..++..... ...++..+..|.||||+|+..|+.+++++|+++|++++..+.. .|.||||+|+..|+.
T Consensus 93 ~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~---------~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 93 TCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIK---------SGRSPLIHAVENNSL 163 (241)
T ss_dssp HHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT---------TCCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccc---------CCCcHHHHHHHcCCH
Confidence 999888776532 1247888999999999999999999999999999999998832 299999999999999
Q ss_pred HHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHh-cCCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccccc
Q 014068 153 KCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLL-APSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTT 229 (431)
Q Consensus 153 eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL-~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~ 229 (431)
+++++|+++|++++.+|..|+||||+|+..|+.+++++| ..+++++..+..+. |++++|...|..+++.
T Consensus 164 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~--------tpl~~A~~~~~~~i~~ 233 (241)
T 1k1a_A 164 SMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHND--------TPLMVARSRRVIDILR 233 (241)
T ss_dssp HHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC--------CTTTTCSSHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCC--------CHHHHHHhcCcHHHHh
Confidence 999999999999999999999999999999999997655 45666655543333 4555555555544443
No 12
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=1.6e-31 Score=247.71 Aligned_cols=193 Identities=25% Similarity=0.260 Sum_probs=171.5
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcc-cCCCCCchHHHHHHHhCCHHHHHHHHhcCCC------CCCCCcchhhHhhhcCCh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTR-ADYLSGRTALHFAAVNGHVRCIRLVVADFVP------SVPFEVMNTQIEGDRGDG 73 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~-~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~------~~~~~~~~l~~a~~~~~~ 73 (431)
|+|+..|+.++|++|++.|+++.. .+. .|.||||+|+..|+.+++++|++.+.. .+..+.++++.++..+..
T Consensus 7 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 85 (228)
T 2dzn_A 7 HQACMENEFFKVQELLHSKPSLLLQKDQ-DGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNL 85 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHCGGGTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCH
T ss_pred HHHHHhCCHHHHHHHHhcCccccccCCC-CCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCH
Confidence 679999999999999999988766 555 999999999999999999999998843 456788999999999999
Q ss_pred hhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHH
Q 014068 74 SSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLK 153 (431)
Q Consensus 74 ~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~e 153 (431)
+.+..++..+. ...++..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+
T Consensus 86 ~~~~~Ll~~g~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 86 EVVKSLYDRPL-KPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKF----------NQIPLHRAASVGSLK 154 (228)
T ss_dssp HHHHHHHSSSS-CCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT----------SCCHHHHHHHTTCHH
T ss_pred HHHHHHHhCCC-CcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCC----------CCCHHHHHHHcCCHH
Confidence 99988877641 2347888999999999999999999999999999999999876 999999999999999
Q ss_pred HHHHHHHCC-CCCcccCCCCCcHHHHHHHhCcHHHHHHhc--CCCCCCCCCCCCC
Q 014068 154 CCQVLLSRG-ASRMSLNCNGWLPLDVARMWGRHWLEPLLA--PSSDAVMPRFHPS 205 (431)
Q Consensus 154 ivklLL~~G-Adin~~d~~G~TpLh~Aa~~g~~~v~~LL~--~~a~~~~~~~~~~ 205 (431)
++++|+++| ++++.+|..|+||||+|+..|+.+++++|. .+++++..+..+.
T Consensus 155 ~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~ 209 (228)
T 2dzn_A 155 LIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA 209 (228)
T ss_dssp HHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSC
T ss_pred HHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCC
Confidence 999999999 999999999999999999999999987776 4777776654433
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=5.2e-31 Score=249.77 Aligned_cols=182 Identities=24% Similarity=0.228 Sum_probs=167.3
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCC----CCCCCCcchhhHhhhcCChhhH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFV----PSVPFEVMNTQIEGDRGDGSSV 76 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~----~~~~~~~~~l~~a~~~~~~~~~ 76 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|++.+. ..+..+.+++++++..+....+
T Consensus 62 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 140 (253)
T 1yyh_A 62 HLAARYSRSDAAKRLLEASADANIQDN-MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGML 140 (253)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHH
Confidence 679999999999999999999999997 99999999999999999999998765 3456788999999999999999
Q ss_pred HhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHH
Q 014068 77 KSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQ 156 (431)
Q Consensus 77 ~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk 156 (431)
..++..+ ..++.+|..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.++++
T Consensus 141 ~~Ll~~g---~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~----------g~tpL~~A~~~~~~~~v~ 207 (253)
T 1yyh_A 141 EDLINSH---ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR----------EETPLFLAAREGSYETAK 207 (253)
T ss_dssp HHHHHTT---CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcC---CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC----------CCCHHHHHHHCCCHHHHH
Confidence 9888754 358889999999999999999999999999999999999876 999999999999999999
Q ss_pred HHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCCC
Q 014068 157 VLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSSD 196 (431)
Q Consensus 157 lLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a~ 196 (431)
+|+++|++++.+|..|+||||+|+..|+.+|+.+|.....
T Consensus 208 ~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 208 VLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred HHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999876543
No 14
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=9.5e-31 Score=241.87 Aligned_cols=201 Identities=19% Similarity=0.144 Sum_probs=128.3
Q ss_pred CCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCChhhHHhhhhhh
Q 014068 7 GHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSVKSKCDQS 83 (431)
Q Consensus 7 G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~~~~~~~~~~~~ 83 (431)
|+.++|++|+++|++++...+..|.||||+|+..|+.+++++|++++... +..+.++++.++..+..+.++.++...
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 56666777777777766553236777777777777777777777655432 344566777777777766666665543
Q ss_pred hhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCC
Q 014068 84 ALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGA 163 (431)
Q Consensus 84 ~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GA 163 (431)
. ..++.++..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|+
T Consensus 82 ~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~~g~ 149 (223)
T 2f8y_A 82 A--TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL----------GKSALHWAAAVNNVDAAVVLLKNGA 149 (223)
T ss_dssp T--SCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT----------SCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred C--CCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCC----------CCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 2 125566666777777777777777777777777777766654 7777777777777777777777777
Q ss_pred CCcccCCCCCcHHHHHHHhCcHHHHHHh-cCCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccc
Q 014068 164 SRMSLNCNGWLPLDVARMWGRHWLEPLL-APSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSS 227 (431)
Q Consensus 164 din~~d~~G~TpLh~Aa~~g~~~v~~LL-~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~ 227 (431)
+++.+|..|+||||+|+..|+.+++++| ..+++++..+..+. +++++|.+.|..++
T Consensus 150 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~--------t~l~~A~~~~~~~i 206 (223)
T 2f8y_A 150 NKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDR--------LPRDIAQERMHHDI 206 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCC--------CHHHHHHHTTCHHH
T ss_pred CCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCC--------CHHHHHHHhcchHH
Confidence 7777777777777777777777665444 34455544433322 56666666665444
No 15
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=1.1e-30 Score=241.39 Aligned_cols=183 Identities=24% Similarity=0.220 Sum_probs=168.6
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCC----CCCCCCcchhhHhhhcCChhhH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFV----PSVPFEVMNTQIEGDRGDGSSV 76 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~----~~~~~~~~~l~~a~~~~~~~~~ 76 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|++++. ..+..+.++++.++..+..+.+
T Consensus 30 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~ 108 (223)
T 2f8y_A 30 HLAARYSRSDAAKRLLEASADANIQDN-MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGML 108 (223)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHH
Confidence 679999999999999999999999997 99999999999999999999998765 3456788999999999999999
Q ss_pred HhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHH
Q 014068 77 KSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQ 156 (431)
Q Consensus 77 ~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk 156 (431)
+.++... ..++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.++++
T Consensus 109 ~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~ 175 (223)
T 2f8y_A 109 EDLINSH---ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR----------EETPLFLAAREGSYETAK 175 (223)
T ss_dssp HHHHHTT---CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------CCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcC---CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC----------CcCHHHHHHHcCCHHHHH
Confidence 8887753 357889999999999999999999999999999999999876 999999999999999999
Q ss_pred HHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCCCC
Q 014068 157 VLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSSDA 197 (431)
Q Consensus 157 lLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a~~ 197 (431)
+|+++|++++.+|..|.||||+|+..++.+++++|.+....
T Consensus 176 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 176 VLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred HHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 99999999999999999999999999999999888776544
No 16
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=4.3e-30 Score=252.12 Aligned_cols=240 Identities=22% Similarity=0.153 Sum_probs=199.5
Q ss_pred CEeeccCCHHHHHHHHHc-CCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCChhhH
Q 014068 1 MQACRYGHWEVVQTLLLF-RCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSV 76 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~-gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~~~~~ 76 (431)
|.||..|+.+.|+.|+.. +++++..|. .|.||||+|+..|+.++|++|++++... +..+.+++++|+..++.+.+
T Consensus 29 ~~A~~~g~~~~v~~ll~~~~~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv 107 (351)
T 3utm_A 29 LEAARSGNEEKLMALLTPLNVNCHASDG-RKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVT 107 (351)
T ss_dssp HHHHHHTCHHHHHHHCCTTTTTCCCSST-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHhcCCCcccCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHH
Confidence 568999999999999875 899999997 9999999999999999999999987654 56688999999999999999
Q ss_pred HhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCcccc---------------------
Q 014068 77 KSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDL--------------------- 135 (431)
Q Consensus 77 ~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~--------------------- 135 (431)
+.++..+ ..++..|..|.||||+|+..|+.+++++|+++|++++..+....+.++.
T Consensus 108 ~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~ 184 (351)
T 3utm_A 108 ELLLKHG---ACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQ 184 (351)
T ss_dssp HHHHHTT---CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHH
Confidence 9988764 3578889999999999999999999999999999998877554333221
Q ss_pred -----------------------CCCCCcHHHHHHhc---CCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHH
Q 014068 136 -----------------------IGAGSTPLHFAACG---GNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEP 189 (431)
Q Consensus 136 -----------------------~~~G~TpLh~Aa~~---g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~ 189 (431)
...|.||||+|+.. ++.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 185 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~ 264 (351)
T 3utm_A 185 AAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME 264 (351)
T ss_dssp HHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 14589999999999 5689999999999999999999999999999999999976
Q ss_pred Hhc-CCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccccccCCCCCchhhhhhccccchhccCCChHHHHHHHHHhhhc
Q 014068 190 LLA-PSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTTSSSDDADTCAVCLERACTVAAEGCRHELCVRCALYLCST 268 (431)
Q Consensus 190 LL~-~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~a~~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~ 268 (431)
+|. .+++++..+..+. |++++|... ||..++++|++.|++
T Consensus 265 ~Ll~~ga~~n~~d~~g~--------t~L~~A~~~-------------------------------~~~~~v~~Ll~~gad 305 (351)
T 3utm_A 265 VLHKHGAKMNALDSLGQ--------TALHRAALA-------------------------------GHLQTCRLLLSYGSD 305 (351)
T ss_dssp HHHHTTCCTTCCCTTSC--------CHHHHHHHH-------------------------------TCHHHHHHHHHTTCC
T ss_pred HHHHCCCCCCCcCCCCC--------CHHHHHHHc-------------------------------CcHHHHHHHHHcCCC
Confidence 665 4566655543322 667777654 456678889999998
Q ss_pred CCCCCCCCCCCCCCC
Q 014068 269 NNIPSEMVGPPGSIP 283 (431)
Q Consensus 269 ~n~~~~~~~~p~~~~ 283 (431)
++..+..+.+|....
T Consensus 306 ~~~~~~~g~tal~~a 320 (351)
T 3utm_A 306 PSIISLQGFTAAQMG 320 (351)
T ss_dssp TTCCCTTSCCHHHHS
T ss_pred CCCcCCCCCChhhhh
Confidence 888877766665444
No 17
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=2.7e-30 Score=249.84 Aligned_cols=176 Identities=22% Similarity=0.200 Sum_probs=121.6
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC---CCCCCcchhhHhhhcCChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVP---SVPFEVMNTQIEGDRGDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~---~~~~~~~~l~~a~~~~~~~~~~ 77 (431)
|+||..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|++.++. .+..+.++++.++..+....+.
T Consensus 64 ~~Aa~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~ 142 (285)
T 3d9h_A 64 HEAAIHGHQLSLRNLISQGWAVNIITA-DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVN 142 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCEECT-TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHH
Confidence 678999999999999999999999987 899999999999999999999987664 2344556666666666666665
Q ss_pred hhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHH
Q 014068 78 SKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQV 157 (431)
Q Consensus 78 ~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivkl 157 (431)
.++..+. .++. +..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++
T Consensus 143 ~Ll~~g~---~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~----------g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 143 LLLQHGA---SVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISH----------LGTPLYLACENQQRACVKK 208 (285)
T ss_dssp HHHHTTC---CSSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTT----------TBCHHHHHHHTTCHHHHHH
T ss_pred HHHHCCC---CCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC----------CCCHHHHHHHcCcHHHHHH
Confidence 5554432 1222 233666666666666666666666666666666544 6666666666666666666
Q ss_pred HHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhc
Q 014068 158 LLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLA 192 (431)
Q Consensus 158 LL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~ 192 (431)
|+++|++++. |..|+||||+|+..|+.+++++|.
T Consensus 209 Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll 242 (285)
T 3d9h_A 209 LLESGADVNQ-GKGQDSPLHAVVRTASEELACLLM 242 (285)
T ss_dssp HHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHH
Confidence 6666666663 566666666666666666654443
No 18
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1.7e-30 Score=231.24 Aligned_cols=150 Identities=34% Similarity=0.459 Sum_probs=142.1
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+||..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++++..
T Consensus 19 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------- 72 (169)
T 2y1l_E 19 LEAARAGRDDEVRILMANGADVNAEDA-SGWTPLHLAAFNGHLEIVEVLLKNGAD------------------------- 72 (169)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-------------------------
Confidence 478999999999999999999999997 999999999999999999999987654
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 160 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~ 160 (431)
++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 73 --------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~ 134 (169)
T 2y1l_E 73 --------VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDME----------GHTPLHLAAMFGHLEIVEVLLK 134 (169)
T ss_dssp --------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC----------CCCHHHHHHHcCCHHHHHHHHH
Confidence 7788889999999999999999999999999999999876 9999999999999999999999
Q ss_pred CCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCC
Q 014068 161 RGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS 194 (431)
Q Consensus 161 ~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~ 194 (431)
+|++++.+|..|.||||+|+..|+.+++++|.+.
T Consensus 135 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 135 NGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred cCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 9999999999999999999999999999888753
No 19
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.1e-30 Score=241.32 Aligned_cols=181 Identities=23% Similarity=0.236 Sum_probs=162.8
Q ss_pred CEeeccCCHHHHHHHHHc-CCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC--------CCCCCcchhhHhhhcC
Q 014068 1 MQACRYGHWEVVQTLLLF-RCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVP--------SVPFEVMNTQIEGDRG 71 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~-gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~--------~~~~~~~~l~~a~~~~ 71 (431)
|+|+..|+.++|++|++. |++++..|. .|+||||+|+..|+.+++++|++.+.. .+..+.+++++|+..+
T Consensus 8 ~~A~~~g~~~~v~~Ll~~~g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 86 (232)
T 2rfa_A 8 LLAAKENDVQALSKLLKFEGCEVHQRGA-MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQ 86 (232)
T ss_dssp HHHHHTTCHHHHHHHHTTTCSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHhcCCCcccCCC-CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcC
Confidence 679999999999999998 999999997 999999999999999999999987654 3457899999999999
Q ss_pred ChhhHHhhhhhhhhhhhhcccC-------------CCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCC
Q 014068 72 DGSSVKSKCDQSALSKFVNKAA-------------DGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGA 138 (431)
Q Consensus 72 ~~~~~~~~~~~~~~~~~in~~d-------------~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~ 138 (431)
..+.++.++..+. .++.++ ..|.||||+|+..|+.++|++|+++|++++.+|..
T Consensus 87 ~~~~v~~Ll~~g~---~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~---------- 153 (232)
T 2rfa_A 87 NVNLVRALLARGA---SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSL---------- 153 (232)
T ss_dssp CHHHHHHHHHTTC---CTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT----------
T ss_pred CHHHHHHHHhCCC---CCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC----------
Confidence 9999998887643 344444 37999999999999999999999999999999976
Q ss_pred CCcHHHHHHhcCCHHHH----HHHHHCCCCC------cccCCCCCcHHHHHHHhCcHHHHHHhcCCC
Q 014068 139 GSTPLHFAACGGNLKCC----QVLLSRGASR------MSLNCNGWLPLDVARMWGRHWLEPLLAPSS 195 (431)
Q Consensus 139 G~TpLh~Aa~~g~~eiv----klLL~~GAdi------n~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a 195 (431)
|+||||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|+..|+.+++++|++..
T Consensus 154 g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 154 GNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp SCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 99999999999999988 9999999998 588999999999999999999988776543
No 20
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=8.1e-31 Score=263.24 Aligned_cols=216 Identities=17% Similarity=0.105 Sum_probs=180.6
Q ss_pred CEeeccCCHHHHHHHH--------HcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC---CCCCCcchhhHhhh
Q 014068 1 MQACRYGHWEVVQTLL--------LFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVP---SVPFEVMNTQIEGD 69 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL--------~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~---~~~~~~~~l~~a~~ 69 (431)
|+||..|+.++|++|+ ++|++++..|. .|.||||+|+..|+.++|++|+++++. .+..+.+++++++.
T Consensus 130 h~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~ 208 (373)
T 2fo1_E 130 HWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC-DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAA 208 (373)
T ss_dssp HHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCC-CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHH
Confidence 6799999998888776 78999999997 999999999999999999999998764 34668899999999
Q ss_pred cCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcC---CHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHH
Q 014068 70 RGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNG---YFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFA 146 (431)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g---~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~A 146 (431)
.+....+..++........++..|..|.||||+|+..| +.+++++|+++|++++..+..... .....|.||||+|
T Consensus 209 ~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~--~~d~~g~t~Lh~A 286 (373)
T 2fo1_E 209 NRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD--SEKYKGRTALHYA 286 (373)
T ss_dssp TTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTS--SSSCCCCCTHHHH
T ss_pred CCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccC--cccccCCCHHHHH
Confidence 99999999998877655678999999999999999998 899999999999999873210000 0002499999999
Q ss_pred HhcCCHHHHHHHHHCC-CCCcccCCCCCcHHHHHHHhCcHHHHHHhc-CCCCCCCCCCCCCCCCchhhhhHHHHHHHcCC
Q 014068 147 ACGGNLKCCQVLLSRG-ASRMSLNCNGWLPLDVARMWGRHWLEPLLA-PSSDAVMPRFHPSNYLSLPLLSVLNVARECGL 224 (431)
Q Consensus 147 a~~g~~eivklLL~~G-Adin~~d~~G~TpLh~Aa~~g~~~v~~LL~-~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~ 224 (431)
+..|+.++|++|+++| ++++.+|..|+||||+|+..|+.+++++|+ .+++++..+..+. |++++|...|+
T Consensus 287 ~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~--------t~l~~A~~~g~ 358 (373)
T 2fo1_E 287 AQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDH--------TARQLAQANNH 358 (373)
T ss_dssp HSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSC--------CHHHHHHHTTC
T ss_pred HHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCC--------CHHHHHHHcCC
Confidence 9999999999999885 999999999999999999999999976654 5666665544333 77888877655
Q ss_pred ccc
Q 014068 225 LSS 227 (431)
Q Consensus 225 ~~~ 227 (431)
.++
T Consensus 359 ~~i 361 (373)
T 2fo1_E 359 HNI 361 (373)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 21
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=5.8e-30 Score=243.57 Aligned_cols=207 Identities=23% Similarity=0.181 Sum_probs=181.3
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~~~~~~ 77 (431)
|+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++++... +..+.++++.++..+....++
T Consensus 44 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 122 (285)
T 1wdy_A 44 HNAVQMSREDIVELLLRHGADPVLRKK-NGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALK 122 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHH
Confidence 679999999999999999999999997 9999999999999999999999987654 456789999999999999998
Q ss_pred hhhhhhhhhhhhccc----------CCCCchHHHHHHHcCCHHHHHHHHHC-CCCCCcccccCCCccccCCCCCcHHHHH
Q 014068 78 SKCDQSALSKFVNKA----------ADGGITALHMAALNGYFDCVQLLLDL-HANVSAVTFHYGTSMDLIGAGSTPLHFA 146 (431)
Q Consensus 78 ~~~~~~~~~~~in~~----------d~~G~TpLh~Aa~~g~~e~VklLL~~-Gadvn~~d~~~~~~~~~~~~G~TpLh~A 146 (431)
.++..+.. ++.. +..|.||||+|+..|+.+++++|++. |++++..+.. |.||||+|
T Consensus 123 ~Ll~~g~~---~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~----------g~t~l~~a 189 (285)
T 1wdy_A 123 FLYKRGAN---VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM----------GRNALIHA 189 (285)
T ss_dssp HHHHTTCC---TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTT----------SCCHHHHH
T ss_pred HHHHhCCC---cccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCC----------CCCHHHHH
Confidence 88776432 3333 77899999999999999999999998 9999999876 99999999
Q ss_pred HhcCC----HHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcC--CCCCCCCCCCCCCCCchhhhhHHHHHH
Q 014068 147 ACGGN----LKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAP--SSDAVMPRFHPSNYLSLPLLSVLNVAR 220 (431)
Q Consensus 147 a~~g~----~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~--~a~~~~~~~~~~~~~~~~l~t~l~~A~ 220 (431)
+..++ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|.. +.+++..+..+. |++++|.
T Consensus 190 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~--------t~l~~A~ 261 (285)
T 1wdy_A 190 LLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK--------TALLLAV 261 (285)
T ss_dssp HHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSC--------CHHHHHH
T ss_pred HHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCC--------cHHHHHH
Confidence 99999 999999999999999999999999999999999999877764 566555544333 8899999
Q ss_pred HcCCccccc
Q 014068 221 ECGLLSSTT 229 (431)
Q Consensus 221 ~~G~~~~~~ 229 (431)
+.|..+++.
T Consensus 262 ~~~~~~i~~ 270 (285)
T 1wdy_A 262 ELKLKKIAE 270 (285)
T ss_dssp HTTCHHHHH
T ss_pred HcCcHHHHH
Confidence 988765543
No 22
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=3.6e-30 Score=234.11 Aligned_cols=181 Identities=21% Similarity=0.181 Sum_probs=162.7
Q ss_pred CEeeccCCHHHHHHHHHcCC-CCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCChhhH
Q 014068 1 MQACRYGHWEVVQTLLLFRC-NVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSV 76 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~ga-di~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~~~~~ 76 (431)
|+|+..|+.+.|++|++.+. +++..+. .|.||||+|+..|+.+++++|++.++.. +..+.++++.++..+..+.+
T Consensus 10 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 88 (201)
T 3hra_A 10 LEAANQRDTKKVKEILQDTTYQVDEVDT-EGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEIL 88 (201)
T ss_dssp HHHHHTTCHHHHHHHHTCTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHhccHHHHHHHHHcCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 57899999999999999876 9999987 9999999999999999999999987754 45578999999999999998
Q ss_pred HhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCC-CCCCcccccCCCccccCCCCCcHHHHHHhcCC----
Q 014068 77 KSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLH-ANVSAVTFHYGTSMDLIGAGSTPLHFAACGGN---- 151 (431)
Q Consensus 77 ~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~G-advn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~---- 151 (431)
+.++.... ..++.++..|.||||+|+..|+.+++++|+++| ++++..+.. |.||||+|+..++
T Consensus 89 ~~Ll~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~----------g~t~L~~A~~~~~~~~~ 156 (201)
T 3hra_A 89 AYMLKHAT--PDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF----------GYTALIEAVGLREGNQL 156 (201)
T ss_dssp HHHHHHSC--CCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT----------SCCHHHHHHHSSCCSHH
T ss_pred HHHHhccC--cccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC----------CCCHHHHHHHhccchhh
Confidence 88875432 347888899999999999999999999999999 999998876 9999999999998
Q ss_pred -HHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCC
Q 014068 152 -LKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS 194 (431)
Q Consensus 152 -~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~ 194 (431)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|.+.
T Consensus 157 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 157 YQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 9999999999999999999999999999999999999888754
No 23
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=2.2e-30 Score=240.63 Aligned_cols=186 Identities=27% Similarity=0.279 Sum_probs=163.8
Q ss_pred CEeeccCCHHHHHHHHHcCCC-CcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC---CCCCCcchhhHhhhcCChhhH
Q 014068 1 MQACRYGHWEVVQTLLLFRCN-VTRADYLSGRTALHFAAVNGHVRCIRLVVADFVP---SVPFEVMNTQIEGDRGDGSSV 76 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gad-i~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~---~~~~~~~~l~~a~~~~~~~~~ 76 (431)
|+|+..|++++|++|++.+.. ++..+. .|.||||+|+..|+.+++++|++.+.. .+..+.+++++++..+..+.+
T Consensus 11 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 89 (231)
T 3aji_A 11 CNLAYSGKLDELKERILADKSLATRTDQ-DSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIV 89 (231)
T ss_dssp HHHHHHTCHHHHHHHHHHCGGGGGCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHhCCHHHHHHHHHhchhhhhcCCC-CCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHH
Confidence 568999999999999998765 555665 999999999999999999999997764 345688999999999999999
Q ss_pred HhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHH
Q 014068 77 KSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQ 156 (431)
Q Consensus 77 ~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk 156 (431)
+.++..+ ..++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.++++
T Consensus 90 ~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~ 156 (231)
T 3aji_A 90 KALLVKG---AHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHY----------DATAMHRAAAKGNLKMVH 156 (231)
T ss_dssp HHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC----------CCcHHHHHHHcCCHHHHH
Confidence 8887654 347888999999999999999999999999999999998866 999999999999999999
Q ss_pred HHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhc-CCCCCCCC
Q 014068 157 VLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLA-PSSDAVMP 200 (431)
Q Consensus 157 lLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~-~~a~~~~~ 200 (431)
+|+++|++++.+|..|+||||+|+..|+.+++++|. .+++++..
T Consensus 157 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 201 (231)
T 3aji_A 157 ILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIE 201 (231)
T ss_dssp HHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred HHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
Confidence 999999999999999999999999999999976665 45655544
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=3.4e-30 Score=239.45 Aligned_cols=179 Identities=24% Similarity=0.238 Sum_probs=166.1
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~~~~~~ 77 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|++++... +..+.++++.++..+..+.+.
T Consensus 45 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 123 (231)
T 3aji_A 45 HWACSAGHTEIVEFLLQLGVPVNDKDD-AGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAV 123 (231)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCcHHHHHHHHHhCCCCCCcCC-CCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 579999999999999999999999997 9999999999999999999999987654 456789999999999999998
Q ss_pred hhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHH
Q 014068 78 SKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQV 157 (431)
Q Consensus 78 ~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivkl 157 (431)
.++..+ ..++.++..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++
T Consensus 124 ~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~ 190 (231)
T 3aji_A 124 MLLEGG---ANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTE----------GNTPLHLACDEERVEEAKF 190 (231)
T ss_dssp HHHHTT---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT----------SCCHHHHHHHTTCHHHHHH
T ss_pred HHHHcC---CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCC----------CCCHHHHHHHCCCHHHHHH
Confidence 887654 347888999999999999999999999999999999999876 9999999999999999999
Q ss_pred HHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcC
Q 014068 158 LLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAP 193 (431)
Q Consensus 158 LL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~ 193 (431)
|+++|++++.+|..|+||||+|+..++.+++++|.+
T Consensus 191 Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~ 226 (231)
T 3aji_A 191 LVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEG 226 (231)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcc
Confidence 999999999999999999999999999999988864
No 25
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=7.4e-30 Score=250.46 Aligned_cols=202 Identities=24% Similarity=0.194 Sum_probs=172.4
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~~~~~~ 77 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|++++... +..+.++++.++..+..+.++
T Consensus 63 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 141 (351)
T 3utm_A 63 HLAAGYNRVRIVQLLLQHGADVHAKDK-GGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCS 141 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCC-CCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 679999999999999999999999997 9999999999999999999999987654 455789999999999999998
Q ss_pred hhhhhhhhhhh---------------------------------------------------hcccCCCCchHHHHHHHc
Q 014068 78 SKCDQSALSKF---------------------------------------------------VNKAADGGITALHMAALN 106 (431)
Q Consensus 78 ~~~~~~~~~~~---------------------------------------------------in~~d~~G~TpLh~Aa~~ 106 (431)
.++..+.-... ....+..|.||||+|+..
T Consensus 142 ~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~ 221 (351)
T 3utm_A 142 LLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVAS 221 (351)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHC
T ss_pred HHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHH
Confidence 88765432111 112456789999999999
Q ss_pred ---CCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhC
Q 014068 107 ---GYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWG 183 (431)
Q Consensus 107 ---g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g 183 (431)
+..+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 222 ~~~~~~~~~~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~ 291 (351)
T 3utm_A 222 LHPKRKQVAELLLRKGANVNEKNKD----------FMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAG 291 (351)
T ss_dssp CSTTHHHHHHHHHHTTCCTTCCCTT----------CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hCccHHHHHHHHHHcCCCcCCcCCC----------CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 5589999999999999999876 999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHh-cCCCCCCCCCCCCCCCCchhhhhHHHHHHH
Q 014068 184 RHWLEPLL-APSSDAVMPRFHPSNYLSLPLLSVLNVARE 221 (431)
Q Consensus 184 ~~~v~~LL-~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~ 221 (431)
+.+++++| ..+++++..+..+. |++++|.+
T Consensus 292 ~~~~v~~Ll~~gad~~~~~~~g~--------tal~~a~~ 322 (351)
T 3utm_A 292 HLQTCRLLLSYGSDPSIISLQGF--------TAAQMGNE 322 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSC--------CHHHHSCH
T ss_pred cHHHHHHHHHcCCCCCCcCCCCC--------ChhhhhhH
Confidence 99997655 55677776655444 56666543
No 26
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=4.7e-30 Score=224.43 Aligned_cols=147 Identities=27% Similarity=0.311 Sum_probs=138.0
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|+++|++++ .+. .|.||||+|+..|+.+++++|++.+..
T Consensus 7 ~~A~~~g~~~~v~~Ll~~g~~~~-~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------- 59 (153)
T 1awc_B 7 LEAARAGQDDEVRILMANGAPFT-TDW-LGTSPLHLAAQYGHFSTTEVLLRAGVS------------------------- 59 (153)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCCC-CCT-TCCCHHHHHHHHTCHHHHHHHHTTTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC-cCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-------------------------
Confidence 56899999999999999999887 454 899999999999999999999987654
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 160 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~ 160 (431)
++.++..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 60 --------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~ 121 (153)
T 1awc_B 60 --------RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDML----------KMTALHWATEHNHQEVVELLIK 121 (153)
T ss_dssp --------TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------CCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCC----------CCCHHHHHHHcCCHHHHHHHHH
Confidence 7788889999999999999999999999999999999876 9999999999999999999999
Q ss_pred CCCCCcccCCCCCcHHHHHHHhCcHHHHHHhc
Q 014068 161 RGASRMSLNCNGWLPLDVARMWGRHWLEPLLA 192 (431)
Q Consensus 161 ~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~ 192 (431)
+|++++.+|..|+||||+|+..|+.+++++|.
T Consensus 122 ~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 122 YGADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 99999999999999999999999999999884
No 27
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=6.9e-30 Score=226.18 Aligned_cols=150 Identities=25% Similarity=0.406 Sum_probs=141.9
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|++.|++++..+. .|.||||+|+..|+.+++++|++.+..
T Consensus 8 ~~A~~~g~~~~v~~ll~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------- 61 (167)
T 3v31_A 8 HQLAAQGEMLYLATRIEQENVINHTDE-EGFTPLMWAAAHGQIAVVEFLLQNGAD------------------------- 61 (167)
T ss_dssp HHHHHTTCHHHHHHHHHHSSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC-------------------------
T ss_pred HHHHHCCCHHHHHHHHHcCCCcCCCCC-CCCCHHHHHHHCCCHHHHHHHHHcCCC-------------------------
Confidence 679999999999999999999999997 999999999999999999999987664
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 160 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~ 160 (431)
++..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 62 --------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 62 --------PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWN----------GGTPLLYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp --------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------CCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCC----------CCCHHHHHHHcCCHHHHHHHHH
Confidence 6778889999999999999999999999999999999876 9999999999999999999999
Q ss_pred CCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCC
Q 014068 161 RGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS 194 (431)
Q Consensus 161 ~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~ 194 (431)
+|++++.+|..|+||||+|+..|+.+++++|.+.
T Consensus 124 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 124 SGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 9999999999999999999999999998888653
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=6.4e-30 Score=245.93 Aligned_cols=155 Identities=29% Similarity=0.306 Sum_probs=81.1
Q ss_pred CEeeccCCHHHHHHHHHcCCC--------CcccCCCCCchHHHHHHHhCCH-HHHHHHHhcCCCCCCCCcchhhHhhhcC
Q 014068 1 MQACRYGHWEVVQTLLLFRCN--------VTRADYLSGRTALHFAAVNGHV-RCIRLVVADFVPSVPFEVMNTQIEGDRG 71 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gad--------i~~~d~~~G~TpLh~Aa~~G~~-eiv~~LL~~~~~~~~~~~~~l~~a~~~~ 71 (431)
|.||..|+.++|++||++|++ ++..+. .|.||||+|+..++. .++++|++.|++
T Consensus 16 ~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~-~~~t~L~~a~~~~~~~~~v~~Ll~~Gad---------------- 78 (269)
T 4b93_B 16 LRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADP-EFCHPLCQCPKCAPAQKRLAKVPASGLG---------------- 78 (269)
T ss_dssp HHHHHTTCHHHHHHHHTCC-----------------------------------------CCCC----------------
T ss_pred HHHHHcCCHHHHHHHHHCCCcccccccccccccCc-cCCCHHHHHHHhCCHHHHHHHHHHCCCC----------------
Confidence 468999999999999999875 345555 799999999988776 488999988765
Q ss_pred ChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCC
Q 014068 72 DGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGN 151 (431)
Q Consensus 72 ~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~ 151 (431)
+|.+|.+|.||||+|+..|+.++|++|++.|++++..+.. |.||||+|+..++
T Consensus 79 -----------------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~----------g~t~l~~a~~~~~ 131 (269)
T 4b93_B 79 -----------------VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNAD----------QAVPLHLACQQGH 131 (269)
T ss_dssp -----------------TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTT----------CCCHHHHHHHHTC
T ss_pred -----------------CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCC----------CCCccccccccCh
Confidence 5555666666666666666666666666666666655544 6666666666666
Q ss_pred HHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHh-cCCCCCCC
Q 014068 152 LKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLL-APSSDAVM 199 (431)
Q Consensus 152 ~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL-~~~a~~~~ 199 (431)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++| ..+++++.
T Consensus 132 ~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~ 180 (269)
T 4b93_B 132 FQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINA 180 (269)
T ss_dssp HHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCc
Confidence 6666666666666666666666666666666666554433 33444433
No 29
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=3e-30 Score=240.77 Aligned_cols=181 Identities=24% Similarity=0.212 Sum_probs=163.1
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCC-------CCCCCCcchhhHhhhcCCh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFV-------PSVPFEVMNTQIEGDRGDG 73 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~-------~~~~~~~~~l~~a~~~~~~ 73 (431)
|+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++.+. ..+..+.++++.++..+..
T Consensus 51 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 129 (241)
T 1k1a_A 51 HLAVITTLPSVVRLLVTAGASPMALDR-HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ 129 (241)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCH
Confidence 579999999999999999999999997 99999999999999999999998765 3456688999999999999
Q ss_pred hhHHhhhhhhhhhhhhcccC-CCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCH
Q 014068 74 SSVKSKCDQSALSKFVNKAA-DGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNL 152 (431)
Q Consensus 74 ~~~~~~~~~~~~~~~in~~d-~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~ 152 (431)
+.+..++..+ ..++..+ ..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.
T Consensus 130 ~~~~~Ll~~g---~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~ 196 (241)
T 1k1a_A 130 ETVQLLLERG---ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYS----------GSSALHSASGRGLL 196 (241)
T ss_dssp HHHHHHHHTT---CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTT----------SCBHHHHHHHHTCH
T ss_pred HHHHHHHHcC---CCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC----------CCCHHHHHHHcCCH
Confidence 9998887764 3467777 78999999999999999999999999999999876 99999999999999
Q ss_pred HHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCC
Q 014068 153 KCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSS 195 (431)
Q Consensus 153 eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a 195 (431)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|....
T Consensus 197 ~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 197 PLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred HHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 9999999999999999999999999999999999998887643
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=3.4e-30 Score=247.90 Aligned_cols=170 Identities=24% Similarity=0.222 Sum_probs=120.5
Q ss_pred CEeeccCCH-HHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC---CCCCCcchhhHhhhcCChhhH
Q 014068 1 MQACRYGHW-EVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVP---SVPFEVMNTQIEGDRGDGSSV 76 (431)
Q Consensus 1 H~Aa~~G~~-evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~---~~~~~~~~l~~a~~~~~~~~~ 76 (431)
|+|+..++. .++++|+++|+++|..|. +|+||||+|+..|+.++|++|++.++. .+..+.++++.++..+....+
T Consensus 57 ~~a~~~~~~~~~v~~Ll~~Gadvn~~d~-~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~ 135 (269)
T 4b93_B 57 CQCPKCAPAQKRLAKVPASGLGVNVTSQ-DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVV 135 (269)
T ss_dssp ------------------CCCCTTCCCT-TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHHHHhCCHHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHH
Confidence 467766665 588999999999999997 999999999999999999999987764 344566777777777777777
Q ss_pred HhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHH
Q 014068 77 KSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQ 156 (431)
Q Consensus 77 ~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk 156 (431)
..++..+ ..++.+|..|.||||+|+..|+.++|++||++|+++|..+.. |.||||+|+..|+.++|+
T Consensus 136 ~~Ll~~g---~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~----------g~t~Lh~A~~~g~~~~v~ 202 (269)
T 4b93_B 136 KCLLDSN---AKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNK----------GNTALHEAVIEKHVFVVE 202 (269)
T ss_dssp HHHHHTT---CCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTT----------SCBHHHHHHHTTCHHHHH
T ss_pred HHHHHCC---CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccC----------CCcHHHHHHHcCCHHHHH
Confidence 7666543 346777777777777777777777777777777777777755 777777777777777777
Q ss_pred HHHHCCCCCcccCCCCCcHHHHHHHhCc
Q 014068 157 VLLSRGASRMSLNCNGWLPLDVARMWGR 184 (431)
Q Consensus 157 lLL~~GAdin~~d~~G~TpLh~Aa~~g~ 184 (431)
+|+++|+|++.+|.+|+||||+|+++++
T Consensus 203 ~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 203 LLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 7777777777777777777777776664
No 31
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=1.6e-29 Score=243.95 Aligned_cols=201 Identities=21% Similarity=0.229 Sum_probs=161.3
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~~~~~~ 77 (431)
|+||..|+.++|++|+++|++++..+. .|.||||+|+..|+.++|++|+++++.. +..+.+++++|+..+..+.+.
T Consensus 45 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~ 123 (299)
T 1s70_B 45 LAACSSGDTEEVLRLLERGADINYANV-DGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAE 123 (299)
T ss_dssp HHHHHHTCHHHHHHHHHHCCCTTCBCT-TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Confidence 568999999999999999999999997 9999999999999999999999987753 455778888888888888888
Q ss_pred hhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHH-CCCCCCcccccC----------------CCccccCCCCC
Q 014068 78 SKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLD-LHANVSAVTFHY----------------GTSMDLIGAGS 140 (431)
Q Consensus 78 ~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~-~Gadvn~~d~~~----------------~~~~~~~~~G~ 140 (431)
.++..+ ..++..+..|.||||+|+..|+.+++++|+. .|.+++..+... .........|.
T Consensus 124 ~Ll~~g---~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 200 (299)
T 1s70_B 124 YLISQG---AHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGG 200 (299)
T ss_dssp HHHHTT---CCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCC
T ss_pred HHHhCC---CCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCC
Confidence 877654 3467788888899999888888888887764 355544321000 00000113499
Q ss_pred cHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHh-cCCCCCCCCCCCCC
Q 014068 141 TPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLL-APSSDAVMPRFHPS 205 (431)
Q Consensus 141 TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL-~~~a~~~~~~~~~~ 205 (431)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++| ..+++++..+..+.
T Consensus 201 t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~ 266 (299)
T 1s70_B 201 TALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQ 266 (299)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 999999999999999999999999999999999999999999999997655 55677666554444
No 32
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=1.7e-30 Score=246.06 Aligned_cols=180 Identities=24% Similarity=0.186 Sum_probs=161.9
Q ss_pred CEeeccCCHH----HHHHHHHcCCCCcc----cCCCCCchHHHHHHHh---CCHHHHHHHHhcCCCC-------------
Q 014068 1 MQACRYGHWE----VVQTLLLFRCNVTR----ADYLSGRTALHFAAVN---GHVRCIRLVVADFVPS------------- 56 (431)
Q Consensus 1 H~Aa~~G~~e----vVk~LL~~gadi~~----~d~~~G~TpLh~Aa~~---G~~eiv~~LL~~~~~~------------- 56 (431)
|+||..|+.+ ++++|+++|++++. .|. .|+||||+|+.. |+.++|++|++.+...
T Consensus 7 ~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~-~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~ 85 (256)
T 2etb_A 7 FSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGS-TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTD 85 (256)
T ss_dssp HHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTT-TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCS
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCC-CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccccccc
Confidence 6799999997 66777889999998 776 999999999999 9999999999876543
Q ss_pred -CCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCC-------------CchHHHHHHHcCCHHHHHHHHH---CC
Q 014068 57 -VPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADG-------------GITALHMAALNGYFDCVQLLLD---LH 119 (431)
Q Consensus 57 -~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~-------------G~TpLh~Aa~~g~~e~VklLL~---~G 119 (431)
+..+.+++++|+..+..+.++.++..+ ..++.++.. |.||||+|+..|+.++|++|++ +|
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g---a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g 162 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENG---ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP 162 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcC---CCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 256899999999999999999888764 347777765 9999999999999999999999 99
Q ss_pred CCCCcccccCCCccccCCCCCcHHHHHHh--cCCHH-------HHHHHHHCCCCC-------cccCCCCCcHHHHHHHhC
Q 014068 120 ANVSAVTFHYGTSMDLIGAGSTPLHFAAC--GGNLK-------CCQVLLSRGASR-------MSLNCNGWLPLDVARMWG 183 (431)
Q Consensus 120 advn~~d~~~~~~~~~~~~G~TpLh~Aa~--~g~~e-------ivklLL~~GAdi-------n~~d~~G~TpLh~Aa~~g 183 (431)
++++.+|.. |+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..|
T Consensus 163 a~~n~~d~~----------g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 232 (256)
T 2etb_A 163 ASLEATDSL----------GNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEG 232 (256)
T ss_dssp CCTTCCCTT----------SCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred CCcCccCCC----------CCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhC
Confidence 999999976 9999999999 88988 999999999999 999999999999999999
Q ss_pred cHHHHHHhcCC
Q 014068 184 RHWLEPLLAPS 194 (431)
Q Consensus 184 ~~~v~~LL~~~ 194 (431)
+.+++++|++.
T Consensus 233 ~~~~v~~Ll~~ 243 (256)
T 2etb_A 233 KIEIFRHILQR 243 (256)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHhC
Confidence 99998888654
No 33
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=4.8e-30 Score=225.58 Aligned_cols=149 Identities=30% Similarity=0.400 Sum_probs=139.8
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+. |+.+++++|++.+..
T Consensus 10 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~-~~~~~v~~Ll~~g~~------------------------- 62 (162)
T 1ihb_A 10 ASAAARGDLEQLTSLLQNNVNVNAQNG-FGRTALQVMKL-GNPEIARRLLLRGAN------------------------- 62 (162)
T ss_dssp HHHHHHTCHHHHHHHTTSCCCTTCCCT-TSCCHHHHCCS-SCHHHHHHHHHTTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHhCCCCccccCc-cCccHHHHHHc-CcHHHHHHHHHcCCC-------------------------
Confidence 578999999999999999999999987 99999999999 999999999987654
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 160 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~ 160 (431)
++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 63 --------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~ 124 (162)
T 1ihb_A 63 --------PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNE----------GNLPLHLAAKEGHLRVVEFLVK 124 (162)
T ss_dssp --------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC----------CCCHHHHHHHcCCHHHHHHHHH
Confidence 7788899999999999999999999999999999999876 9999999999999999999999
Q ss_pred CCCC-CcccCCCCCcHHHHHHHhCcHHHHHHhcCC
Q 014068 161 RGAS-RMSLNCNGWLPLDVARMWGRHWLEPLLAPS 194 (431)
Q Consensus 161 ~GAd-in~~d~~G~TpLh~Aa~~g~~~v~~LL~~~ 194 (431)
+|++ ++..|..|+||||+|+..|+.+++++|.+.
T Consensus 125 ~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 125 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp HSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 9998 699999999999999999999998777654
No 34
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=3.2e-29 Score=232.72 Aligned_cols=203 Identities=20% Similarity=0.210 Sum_probs=172.6
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCC----CCCcchhhHhhhcCChhhH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSV----PFEVMNTQIEGDRGDGSSV 76 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~----~~~~~~l~~a~~~~~~~~~ 76 (431)
|+|+..|+.++|++|++.|++++..+. .|.||||+|+..|+.+++++|++++.... ..+.++++.++..+....+
T Consensus 14 ~~A~~~g~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v 92 (240)
T 3eu9_A 14 VKATQYGIYERCRELVEAGYDVRQPDK-ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMV 92 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHH
T ss_pred HHHHHcCChHHHHHHHHcCCCcCCCCC-CCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHH
Confidence 468999999999999999999999997 99999999999999999999999877543 3367899999999999999
Q ss_pred HhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCC-HHHH
Q 014068 77 KSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGN-LKCC 155 (431)
Q Consensus 77 ~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~-~eiv 155 (431)
+.++..+ ..++.++..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..++ .+++
T Consensus 93 ~~Ll~~g---~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~----------g~t~l~~a~~~~~~~~~~ 159 (240)
T 3eu9_A 93 VQLMKYG---ADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQN----------GMTPLMWAAYRTHSVDPT 159 (240)
T ss_dssp HHHHHTT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHHCCSSTTH
T ss_pred HHHHHcC---CCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCC----------CCcHHHHHHHhCChHHHH
Confidence 8887653 347788899999999999999999999999999999998866 9999999996665 8999
Q ss_pred HHHHHCCCCCcccCC-CCCcHHHHHHHhCcHHHHHHhc-CCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCc
Q 014068 156 QVLLSRGASRMSLNC-NGWLPLDVARMWGRHWLEPLLA-PSSDAVMPRFHPSNYLSLPLLSVLNVARECGLL 225 (431)
Q Consensus 156 klLL~~GAdin~~d~-~G~TpLh~Aa~~g~~~v~~LL~-~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~ 225 (431)
++|++.|++++..+. .|.||||+|+..|+.+++++|. .+++++.....+. +++++|.+.|..
T Consensus 160 ~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~--------t~l~~A~~~~~~ 223 (240)
T 3eu9_A 160 RLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGE--------SALDLAKQRKNV 223 (240)
T ss_dssp HHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSC--------BHHHHHHHTTCH
T ss_pred HHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC--------CHHHHHHHcCcH
Confidence 999999999999987 9999999999999999876655 4566555433322 667777665443
No 35
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.4e-29 Score=225.38 Aligned_cols=150 Identities=27% Similarity=0.419 Sum_probs=140.3
Q ss_pred CEeeccCCHHHHHHHHHcCCC-CcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCN-VTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSK 79 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gad-i~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ 79 (431)
|+||..|+.++|++|++.+.+ ++..+. .|+||||+|+..|+.+++++|++.+..
T Consensus 7 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------ 61 (172)
T 3v30_A 7 HQLAAQGELDQLKEHLRKGDNLVNKPDE-RGFTPLIWASAFGEIETVRFLLEWGAD------------------------ 61 (172)
T ss_dssp HHHHHTTCHHHHHHHHTTCSGGGGCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCC------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCcccccCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------
Confidence 579999999999999999987 777776 999999999999999999999987665
Q ss_pred hhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 014068 80 CDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLL 159 (431)
Q Consensus 80 ~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL 159 (431)
++.++..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+
T Consensus 62 ---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll 122 (172)
T 3v30_A 62 ---------PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWN----------GGTPLLYAVRGNHVKCVEALL 122 (172)
T ss_dssp ---------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHH
T ss_pred ---------chhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC----------CCCHHHHHHHcCCHHHHHHHH
Confidence 7788899999999999999999999999999999999876 999999999999999999999
Q ss_pred HCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCC
Q 014068 160 SRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS 194 (431)
Q Consensus 160 ~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~ 194 (431)
++|++++.+|..|+||||+|+..|+.+++++|.+.
T Consensus 123 ~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (172)
T 3v30_A 123 ARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157 (172)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence 99999999999999999999999999998877653
No 36
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=7.7e-30 Score=231.26 Aligned_cols=152 Identities=23% Similarity=0.220 Sum_probs=110.1
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCC---CCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHH
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVP---SVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAAL 105 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~---~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~ 105 (431)
.|+||||+|+..|+.+++++|++++.. .+..+.+++++++..+....++.++..+ ..++.+|..|.||||+|+.
T Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~ 110 (192)
T 2rfm_A 34 YNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG---SNVNTKDFSGKTPLMWSII 110 (192)
T ss_dssp TCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT---CCTTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCC---CCCCCCCCCCCcHHHHHHH
Confidence 455555555555555555555544332 1223444444444444444444443332 2377788889999999999
Q ss_pred cCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcH
Q 014068 106 NGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRH 185 (431)
Q Consensus 106 ~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~ 185 (431)
.|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 111 ~~~~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 111 FGYSEMSYFLLEHGANVNDRNLE----------GETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQ 180 (192)
T ss_dssp HTCHHHHHHHHHTTCCSSCCCTT----------CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCC----------CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcH
Confidence 99999999999999999888866 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcC
Q 014068 186 WLEPLLAP 193 (431)
Q Consensus 186 ~v~~LL~~ 193 (431)
+++++|.+
T Consensus 181 ~~v~~Ll~ 188 (192)
T 2rfm_A 181 EVIKIFTE 188 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 98888754
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=9.5e-31 Score=244.72 Aligned_cols=185 Identities=19% Similarity=0.184 Sum_probs=164.5
Q ss_pred CEeeccCCHHHHHHHHHcCC----CCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCCh
Q 014068 1 MQACRYGHWEVVQTLLLFRC----NVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDG 73 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~ga----di~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~~ 73 (431)
|+|+..|+.++|++|++.+. +++..+. .|+||||+|+..|+.+++++|++.++.. +..+.+++++++..+..
T Consensus 13 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 91 (236)
T 1ikn_D 13 HLAIIHEEKALTMEVIRQVKGDLAFLNFQNN-LQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCL 91 (236)
T ss_dssp HHHHHTTCSSSSSCCCC-----CCCCCCCCT-TCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCH
T ss_pred HHHHHcCChhHHHHHHHHhhccHHHhhccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 67999999999999998765 7888887 9999999999999999999999887653 45688999999999999
Q ss_pred hhHHhhhhhhhh---hhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccc-cCCCccccCCCCCcHHHHHHhc
Q 014068 74 SSVKSKCDQSAL---SKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTF-HYGTSMDLIGAGSTPLHFAACG 149 (431)
Q Consensus 74 ~~~~~~~~~~~~---~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~-~~~~~~~~~~~G~TpLh~Aa~~ 149 (431)
..+..++..... ...++..+..|.||||+|+..|+.++|++|+++|++++..+. . |.||||+|+..
T Consensus 92 ~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~----------g~tpL~~A~~~ 161 (236)
T 1ikn_D 92 ASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCN----------GRTALHLAVDL 161 (236)
T ss_dssp HHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTT----------CCCHHHHHHHT
T ss_pred HHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC----------CCCHHHHHHHc
Confidence 999988876542 334688889999999999999999999999999999999886 5 99999999999
Q ss_pred CCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCCC
Q 014068 150 GNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSSD 196 (431)
Q Consensus 150 g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a~ 196 (431)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|.....
T Consensus 162 ~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 162 QNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp TCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 99999999999999999999999999999999999999877766544
No 38
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=2.2e-29 Score=243.67 Aligned_cols=239 Identities=14% Similarity=-0.001 Sum_probs=181.2
Q ss_pred ccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCC-CCCcchhhHhhhcCChhhHHhhhhhh
Q 014068 5 RYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSV-PFEVMNTQIEGDRGDGSSVKSKCDQS 83 (431)
Q Consensus 5 ~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~-~~~~~~l~~a~~~~~~~~~~~~~~~~ 83 (431)
...+.+.|+.||..+ +++..|. .|+||||+|+..|+.++|++|+++++..+ ..+.+++++|+..++.+.++.++..+
T Consensus 8 ~~~~~~~v~~lL~~~-~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 85 (285)
T 3kea_A 8 NTWKSKQLKSFLSSK-DTFKADV-HGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSG 85 (285)
T ss_dssp GGCCHHHHHHHHHST-TTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTT
T ss_pred HhcCHHHHHHHHHhC-CCCccCC-CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 344555555555444 6788887 89999999999999999999998776433 35789999999999999998887764
Q ss_pred hhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCC-CcHHHHHHhcCCHHHHHHHHHCC
Q 014068 84 ALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAG-STPLHFAACGGNLKCCQVLLSRG 162 (431)
Q Consensus 84 ~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G-~TpLh~Aa~~g~~eivklLL~~G 162 (431)
..++.+|..|.||||+|+..|+.++|++|+++|++++..+.. | .||||+|+..|+.+++++|+++|
T Consensus 86 ---a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~----------g~~t~L~~A~~~~~~~~v~~Ll~~g 152 (285)
T 3kea_A 86 ---LDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKT----------GWKTSFYHAVMLNDVSIVSYFLSEI 152 (285)
T ss_dssp ---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSS----------GGGSHHHHHHHTTCHHHHHHHHTTS
T ss_pred ---CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCC----------CCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 357888999999999999999999999999999999988866 7 79999999999999999999999
Q ss_pred CCCcccCCCCCcHHHHHHHhCcHHHHHHhc-CCCCCCCCCCCCCCCCchhhhhH-HHHHHHcCCccccccCCCC-Cchhh
Q 014068 163 ASRMSLNCNGWLPLDVARMWGRHWLEPLLA-PSSDAVMPRFHPSNYLSLPLLSV-LNVARECGLLSSTTSSSDD-ADTCA 239 (431)
Q Consensus 163 Adin~~d~~G~TpLh~Aa~~g~~~v~~LL~-~~a~~~~~~~~~~~~~~~~l~t~-l~~A~~~G~~~~~~a~~~~-~~~C~ 239 (431)
+++... ..|+||||+|+..|+.+++++|. .+++++.....+. ++ +++|...|..+++...... .+.
T Consensus 153 ~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~--------t~~L~~A~~~~~~~~v~~Ll~~gad~-- 221 (285)
T 3kea_A 153 PSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLF--------IPDIKLAIDNKDIEMLQALFKYDINI-- 221 (285)
T ss_dssp CTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBC--------CTTHHHHHHHTCHHHHHHHTTSCBCS--
T ss_pred Cccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCC--------ChHHHHHHHcCCHHHHHHHHHcCCCC--
Confidence 887332 28899999999999999876665 4666655543322 43 8888888877665532111 111
Q ss_pred hhhccccchhccCCChHHHHHHHHHhhhcCCCCC
Q 014068 240 VCLERACTVAAEGCRHELCVRCALYLCSTNNIPS 273 (431)
Q Consensus 240 vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~ 273 (431)
+.....++ ..||..+++.|++.|++....+
T Consensus 222 ---~~~~~~a~-~~~~~~iv~~Ll~~g~~~~~~~ 251 (285)
T 3kea_A 222 ---YSANLENV-LLDDAEIAKMIIEKHVEYKSDS 251 (285)
T ss_dssp ---TTTTGGGG-TTTCHHHHHHHHHHHHHHTTCT
T ss_pred ---CCCChhhh-hcCCHHHHHHHHHcCCCCCCcc
Confidence 01112233 3589999999999999976433
No 39
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=2e-28 Score=233.52 Aligned_cols=218 Identities=20% Similarity=0.147 Sum_probs=167.0
Q ss_pred CcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC------CCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCC
Q 014068 22 VTRADYLSGRTALHFAAVNGHVRCIRLVVADFVP------SVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADG 95 (431)
Q Consensus 22 i~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~------~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~ 95 (431)
++..|. +|+||||+|+..|+.++|++|++.+.. .+..+.+++++|+..+....++.++..+ ..++.+|..
T Consensus 2 ~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---a~~~~~~~~ 77 (282)
T 1oy3_D 2 FGYVTE-DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG---AGVLVAERG 77 (282)
T ss_dssp CCCCCT-TCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCSSCCCTT
T ss_pred CCccCC-CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCC
Confidence 345666 999999999999999999999986553 4567899999999999999999988764 457889999
Q ss_pred CchHHHHHHHcCCHHHHHHHHHCCCCCCcccccC------------------------------------CCcc-ccCCC
Q 014068 96 GITALHMAALNGYFDCVQLLLDLHANVSAVTFHY------------------------------------GTSM-DLIGA 138 (431)
Q Consensus 96 G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~------------------------------------~~~~-~~~~~ 138 (431)
|.||||+|+..|+.+++++|+++|++........ +..+ .....
T Consensus 78 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
T 1oy3_D 78 GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD 157 (282)
T ss_dssp SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTT
T ss_pred CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCC
Confidence 9999999999999999999999987632211000 0000 00135
Q ss_pred CCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCC-CCcHHHHHHHhCcHHHHHHhc-CCCCCCCCCCCCCCCCchhhhhHH
Q 014068 139 GSTPLHFAACGGNLKCCQVLLSRGASRMSLNCN-GWLPLDVARMWGRHWLEPLLA-PSSDAVMPRFHPSNYLSLPLLSVL 216 (431)
Q Consensus 139 G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~-G~TpLh~Aa~~g~~~v~~LL~-~~a~~~~~~~~~~~~~~~~l~t~l 216 (431)
|.||||+|+..|+.+++++|+++|++++..+.. |+||||+|+..|+.+++++|+ .+++++..+..+. |++
T Consensus 158 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~--------tpL 229 (282)
T 1oy3_D 158 GHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGR--------TPL 229 (282)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC--------CHH
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC--------CHH
Confidence 999999999999999999999999999999854 999999999999999976665 5666655443322 566
Q ss_pred HHHHHcCCccccccCCCCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCC
Q 014068 217 NVARECGLLSSTTSSSDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSI 282 (431)
Q Consensus 217 ~~A~~~G~~~~~~a~~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~ 282 (431)
++|.. . |+..+++.|++.|++++..+..+.+|...
T Consensus 230 ~~A~~------------------------------~-~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 264 (282)
T 1oy3_D 230 GSALL------------------------------R-PNPILARLLRAHGAPEPEDGGDKLSPCSS 264 (282)
T ss_dssp HHHHT------------------------------S-SCHHHHHHHHHTTCCCCCCC---------
T ss_pred HHHHH------------------------------c-CCcHHHHHHHHcCCCcCcCCCcccccccc
Confidence 66653 2 67778999999999999888777766543
No 40
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=2.7e-29 Score=239.25 Aligned_cols=177 Identities=23% Similarity=0.232 Sum_probs=156.3
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC--CCCCcchhhHhhhcCChhhHHh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS--VPFEVMNTQIEGDRGDGSSVKS 78 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~--~~~~~~~l~~a~~~~~~~~~~~ 78 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|++.++.. ...+.++++.++..+..+.++.
T Consensus 41 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~ 119 (261)
T 2xai_A 41 HEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNS 119 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHH
Confidence 679999999999999999999999997 9999999999999999999999987754 3447789999999999998888
Q ss_pred hhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHH
Q 014068 79 KCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVL 158 (431)
Q Consensus 79 ~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklL 158 (431)
++..+ ..++.+|..|.||||+|+..|+.+++++|+++|++++. +.. |.||||+|+..|+.+++++|
T Consensus 120 Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~----------g~t~Lh~A~~~~~~~~v~~L 185 (261)
T 2xai_A 120 LIAYG---GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKG----------QDSPLHAVARTASEELACLL 185 (261)
T ss_dssp HHHTT---CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBT----------TBCHHHHHHHHTCHHHHHHH
T ss_pred HHHcC---CCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCC----------CCChHHHHHHcCCHHHHHHH
Confidence 87664 35788899999999999999999999999999999985 433 99999999999999999999
Q ss_pred HHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCC
Q 014068 159 LSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS 194 (431)
Q Consensus 159 L~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~ 194 (431)
+++|++++.+|..|+||||+|+..+. ++++|...
T Consensus 186 l~~gad~~~~d~~g~tpl~~A~~~~~--~~~~ll~~ 219 (261)
T 2xai_A 186 MDFGADTQAKNAEGKRPVELVPPESP--LAQLFLER 219 (261)
T ss_dssp HHTTCCTTCCCTTSCCGGGGSCTTCT--HHHHHHHC
T ss_pred HHcCCCCCCcCCCCCChhhhcccccc--HHHHHHhc
Confidence 99999999999999999999996654 55555543
No 41
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=3.4e-29 Score=251.40 Aligned_cols=184 Identities=21% Similarity=0.179 Sum_probs=162.2
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcC------CCCCCCCcchhhHhhhcC---
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADF------VPSVPFEVMNTQIEGDRG--- 71 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~------~~~~~~~~~~l~~a~~~~--- 71 (431)
|+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++++ ...+..+.+++++++..+
T Consensus 171 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~ 249 (373)
T 2fo1_E 171 MLAVLARRRRLVAYLMKAGADPTIYNK-SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRD 249 (373)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSCCCCT-TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTT
T ss_pred HHHHHcChHHHHHHHHHCCCCCcccCC-CCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcc
Confidence 679999999999999999999999997 9999999999999999999999754 345778999999999887
Q ss_pred ChhhHHhhhhhhhhhh-----hhcccCCCCchHHHHHHHcCCHHHHHHHHHCC-CCCCcccccCCCccccCCCCCcHHHH
Q 014068 72 DGSSVKSKCDQSALSK-----FVNKAADGGITALHMAALNGYFDCVQLLLDLH-ANVSAVTFHYGTSMDLIGAGSTPLHF 145 (431)
Q Consensus 72 ~~~~~~~~~~~~~~~~-----~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~G-advn~~d~~~~~~~~~~~~G~TpLh~ 145 (431)
....+..++..+.... ..+..|..|.||||+|+..|+.++|++|+++| ++++..|.. |.||||+
T Consensus 250 ~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~----------g~TpL~~ 319 (373)
T 2fo1_E 250 QVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDED----------GKTPIML 319 (373)
T ss_dssp HHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTT----------CCCHHHH
T ss_pred hHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCC----------CCCHHHH
Confidence 5666666665543211 12346778999999999999999999999876 999999976 9999999
Q ss_pred HHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCC
Q 014068 146 AACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSS 195 (431)
Q Consensus 146 Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a 195 (431)
|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|.+..
T Consensus 320 A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 320 AAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999998887653
No 42
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=6.2e-29 Score=231.79 Aligned_cols=174 Identities=26% Similarity=0.341 Sum_probs=160.4
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcC-C---CCCCCCcchhhHhhhcCChhhH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADF-V---PSVPFEVMNTQIEGDRGDGSSV 76 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~-~---~~~~~~~~~l~~a~~~~~~~~~ 76 (431)
|+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++.+ . ..+..+.++++.++..+....+
T Consensus 49 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~ 127 (237)
T 3b7b_A 49 MEAAENNHLEAVKYLIKAGALVDPKDA-EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLV 127 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCCCCCT-TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHhCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHH
Confidence 578999999999999999999999997 9999999999999999999999876 2 2456688999999999999999
Q ss_pred HhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHH
Q 014068 77 KSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQ 156 (431)
Q Consensus 77 ~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk 156 (431)
+.++..+ ..++.++..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.++++
T Consensus 128 ~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~ 194 (237)
T 3b7b_A 128 KLLLSKG---SDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIH----------GDSPLHIAARENRYDCVV 194 (237)
T ss_dssp HHHHHTT---CCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTT----------CCCHHHHHHHTTCHHHHH
T ss_pred HHHHHCC---CCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCC----------CCCHHHHHHHhCCHhHHH
Confidence 8887754 357888999999999999999999999999999999999876 999999999999999999
Q ss_pred HHHHCCCCCcccCCCCCcHHHHHHHhCcHHHH
Q 014068 157 VLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 188 (431)
Q Consensus 157 lLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~ 188 (431)
+|+++|++++.+|..|+||||+|+..++.+.+
T Consensus 195 ~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~ 226 (237)
T 3b7b_A 195 LFLSRDSDVTLKNKEGETPLQCASLNSQVWSA 226 (237)
T ss_dssp HHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHH
T ss_pred HHHHcCCCCCccCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997553
No 43
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=2.9e-29 Score=249.85 Aligned_cols=179 Identities=13% Similarity=0.049 Sum_probs=162.1
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhc----CCC--------------------C
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVAD----FVP--------------------S 56 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~----~~~--------------------~ 56 (431)
|+|+..|+.++|++|+++|++++.. .|.||||+|+..|+.+++++|++. +.. .
T Consensus 58 ~~A~~~g~~~~v~~Ll~~g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (364)
T 3ljn_A 58 HLACKFGCVDTAKYLASVGEVHSLW---HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVK 134 (364)
T ss_dssp HHHHHHCCHHHHHHHHHHCCCCCCB---TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEE
T ss_pred HHHHHcCCHHHHHHHHHCCCCcccc---CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccC
Confidence 6799999999999999999976653 789999999999999999999987 443 3
Q ss_pred CCCCcchhhHhhhcC--ChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCC-----CCcccccC
Q 014068 57 VPFEVMNTQIEGDRG--DGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHAN-----VSAVTFHY 129 (431)
Q Consensus 57 ~~~~~~~l~~a~~~~--~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gad-----vn~~d~~~ 129 (431)
+..+.+++++++..+ ..+.++.++..+ ..++.+|..|.||||+|+..|+.++|++|+++|++ ++..+..
T Consensus 135 ~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g---a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~- 210 (364)
T 3ljn_A 135 HCKGQTALHWCVGLGPEYLEMIKILVQLG---ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQ- 210 (364)
T ss_dssp EESCCCHHHHHHHSCGGGHHHHHHHHHHT---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTT-
T ss_pred CCCCCCHHHHHHHcCCchHHHHHHHHHcC---CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCC-
Confidence 446889999999999 888888888764 45889999999999999999999999999999999 8888866
Q ss_pred CCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCC
Q 014068 130 GTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSS 195 (431)
Q Consensus 130 ~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a 195 (431)
|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|++..
T Consensus 211 ---------g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 267 (364)
T 3ljn_A 211 ---------GNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKT 267 (364)
T ss_dssp ---------CCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHS
T ss_pred ---------CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999988877653
No 44
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=4.2e-29 Score=241.45 Aligned_cols=178 Identities=22% Similarity=0.228 Sum_probs=160.6
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC--CCCCcchhhHhhhcCChhhHHh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS--VPFEVMNTQIEGDRGDGSSVKS 78 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~--~~~~~~~l~~a~~~~~~~~~~~ 78 (431)
|+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++.+... ...+.+++++++..+..+.+..
T Consensus 97 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~ 175 (285)
T 3d9h_A 97 HEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNS 175 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHH
T ss_pred HHHHHCCcHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 679999999999999999999999997 9999999999999999999999987653 3457899999999999999998
Q ss_pred hhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHH
Q 014068 79 KCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVL 158 (431)
Q Consensus 79 ~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklL 158 (431)
++..+ ..++.+|..|.||||+|+..|+.++|++|+++|++++. +.. |.||||+|+..|+.+++++|
T Consensus 176 Ll~~g---~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~----------g~t~L~~A~~~~~~~~v~~L 241 (285)
T 3d9h_A 176 LIAYG---GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKG----------QDSPLHAVVRTASEELACLL 241 (285)
T ss_dssp HHHTT---CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBT----------TBCHHHHHHHTTCHHHHHHH
T ss_pred HHHCC---CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCC----------CCCHHHHHHHcCCHHHHHHH
Confidence 88664 35888999999999999999999999999999999995 544 99999999999999999999
Q ss_pred HHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCC
Q 014068 159 LSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSS 195 (431)
Q Consensus 159 L~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a 195 (431)
+++|++++.+|.+|+||||+|+ ++.+++++|++..
T Consensus 242 l~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~ 276 (285)
T 3d9h_A 242 MDFGADTQAKNAEGKRPVELVP--PESPLAQLFLERE 276 (285)
T ss_dssp HHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC
T ss_pred HHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhh
Confidence 9999999999999999999999 3456777666543
No 45
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=2.3e-29 Score=242.51 Aligned_cols=182 Identities=22% Similarity=0.204 Sum_probs=158.6
Q ss_pred CEeeccCCHHHHHHHHHcCCC--CcccCCCCCchHHHHHHHhCCHHHHHHHHhcCC----CCCCCCcchhhHhh-----h
Q 014068 1 MQACRYGHWEVVQTLLLFRCN--VTRADYLSGRTALHFAAVNGHVRCIRLVVADFV----PSVPFEVMNTQIEG-----D 69 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gad--i~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~----~~~~~~~~~l~~a~-----~ 69 (431)
|.|+..|+.+.++.|++.+.+ +|..|. .|+||||+|+..|+.++|++|++.+. ..+..+.+++++++ .
T Consensus 81 ~~a~~~~~~~~~~~l~~~~~~~~~n~~d~-~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~ 159 (276)
T 4hbd_A 81 HPELVRRHLVTFRAMSARLLDYVVNIADS-NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKT 159 (276)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCS
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCcCCCC-CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhh
Confidence 567788899999999988766 888887 99999999999999999999999776 34567889999988 4
Q ss_pred cCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhc
Q 014068 70 RGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACG 149 (431)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~ 149 (431)
.+....+..++..+ ...+..+..|.||||+|+..|+.++|++|+++|++++..|.. |+||||+|+..
T Consensus 160 ~~~~~~v~~Ll~~g---~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~----------G~TpLh~A~~~ 226 (276)
T 4hbd_A 160 QDDIETVLQLFRLG---NINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDD----------GSTALMCACEH 226 (276)
T ss_dssp HHHHHHHHHHHHHS---CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHH
T ss_pred hhhHHHHHHHHHcC---CCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC----------CCCHHHHHHHC
Confidence 45555555555544 346777888999999999999999999999999999999976 99999999999
Q ss_pred CCHHHHHHHHH-CCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCCC
Q 014068 150 GNLKCCQVLLS-RGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSSD 196 (431)
Q Consensus 150 g~~eivklLL~-~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a~ 196 (431)
|+.++|++|++ .|++++.+|..|+||||+|+..|+.+++++|.+..+
T Consensus 227 g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 227 GHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp TCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 99999999999 899999999999999999999999999998876544
No 46
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=7e-29 Score=222.62 Aligned_cols=158 Identities=28% Similarity=0.359 Sum_probs=143.8
Q ss_pred CEeeccCCHHHHHHHHHc-CCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhh
Q 014068 1 MQACRYGHWEVVQTLLLF-RCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSK 79 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~-gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ 79 (431)
|.|+..|+.++|++|++. +.+++..+. .|+||||+|+..|+.+++++|++.+..
T Consensus 10 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------ 64 (179)
T 3f6q_A 10 FTQCREGNAVAVRLWLDNTENDLNQGDD-HGFSPLHWACREGRSAVVEMLIMRGAR------------------------ 64 (179)
T ss_dssp HHHHHHTCHHHHHHHHHCTTSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC------------------------
T ss_pred HHHHHcCCHHHHHHHHhcCcccccccCC-CCCCHHHHHHHcCcHHHHHHHHHcCCC------------------------
Confidence 468999999999999998 677888887 999999999999999999999987665
Q ss_pred hhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 014068 80 CDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLL 159 (431)
Q Consensus 80 ~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL 159 (431)
++.+|..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|+
T Consensus 65 ---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~----------g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 65 ---------INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEH----------GNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp ---------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHH
T ss_pred ---------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC----------CCCHHHHHHHcCCHHHHHHHH
Confidence 7888899999999999999999999999999999999976 999999999999999999999
Q ss_pred HCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhc-CCCCCCCCCC
Q 014068 160 SRGASRMSLNCNGWLPLDVARMWGRHWLEPLLA-PSSDAVMPRF 202 (431)
Q Consensus 160 ~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~-~~a~~~~~~~ 202 (431)
++|++++.+|..|.||||+|+..++.+++++|. .+++++....
T Consensus 126 ~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~ 169 (179)
T 3f6q_A 126 ANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPY 169 (179)
T ss_dssp HTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCC
T ss_pred HCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCc
Confidence 999999999999999999999999999876554 5666654433
No 47
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=4.1e-29 Score=220.75 Aligned_cols=150 Identities=29% Similarity=0.425 Sum_probs=137.4
Q ss_pred CEeeccCCHHHHHHHHHc-CCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhh
Q 014068 1 MQACRYGHWEVVQTLLLF-RCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSK 79 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~-gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ 79 (431)
|+|+..|+.++|++|++. +.+++..+. .|.||||+|+..|+.+++++|++++..
T Consensus 13 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------ 67 (165)
T 3twr_A 13 LEAAKAGDVETVKKLCTVQSVNCRDIEG-RQSTPLHFAAGYNRVSVVEYLLQHGAD------------------------ 67 (165)
T ss_dssp HHHHHHTCHHHHHHHCCTTTTTCCCTTT-TCCCHHHHHHHTTCHHHHHHHHHTTCC------------------------
T ss_pred HHHHHhCCHHHHHHHHHcCCCCcccccc-CCCCHHHHHHHcChHHHHHHHHhcCCC------------------------
Confidence 568999999999999984 567777776 899999999999999999999987654
Q ss_pred hhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 014068 80 CDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLL 159 (431)
Q Consensus 80 ~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL 159 (431)
++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+
T Consensus 68 ---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll 128 (165)
T 3twr_A 68 ---------VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLW----------KFTPLHEAAAKGKYEICKLLL 128 (165)
T ss_dssp ---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------CCCHHHHHHHTTCHHHHHHHH
T ss_pred ---------CCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCC----------CCCHHHHHHHcCCHHHHHHHH
Confidence 7888999999999999999999999999999999999876 999999999999999999999
Q ss_pred HCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCC
Q 014068 160 SRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSS 195 (431)
Q Consensus 160 ~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a 195 (431)
++|++++.+|..|+||||+|+. ++.+++++|...+
T Consensus 129 ~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 129 QHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp HTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred HcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 9999999999999999999877 8899999887654
No 48
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=1.2e-28 Score=215.37 Aligned_cols=148 Identities=22% Similarity=0.282 Sum_probs=138.0
Q ss_pred CEeeccCCHHHHHHHHHc-CCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhh
Q 014068 1 MQACRYGHWEVVQTLLLF-RCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSK 79 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~-gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ 79 (431)
|+|+..|+.++|++|++. +.+++..+. .|.||||+ +..|+.+++++|++.+..
T Consensus 7 ~~A~~~g~~~~v~~ll~~~~~~~~~~~~-~g~t~L~~-~~~~~~~~v~~Ll~~g~~------------------------ 60 (156)
T 1bd8_A 7 SGAAARGDVQEVRRLLHRELVHPDALNR-FGKTALQV-MMFGSTAIALELLKQGAS------------------------ 60 (156)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCCTTCCCT-TSCCHHHH-SCTTCHHHHHHHHHTTCC------------------------
T ss_pred HHHHHhCCHHHHHHHHHhhCcCccccCC-CCCcHHHH-HHcCCHHHHHHHHHCCCC------------------------
Confidence 578999999999999998 458898887 99999999 999999999999987665
Q ss_pred hhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 014068 80 CDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLL 159 (431)
Q Consensus 80 ~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL 159 (431)
++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+
T Consensus 61 ---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll 121 (156)
T 1bd8_A 61 ---------PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT----------GALPIHLAVQEGHTAVVSFLA 121 (156)
T ss_dssp ---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT----------SCCHHHHHHHHTCHHHHHHHH
T ss_pred ---------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC----------CCcHHHHHHHhChHHHHHHHH
Confidence 7888999999999999999999999999999999999876 999999999999999999999
Q ss_pred HCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCC
Q 014068 160 SRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS 194 (431)
Q Consensus 160 ~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~ 194 (431)
++ ++++.+|..|+||||+|+..|+.+++++|.+.
T Consensus 122 ~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 122 AE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred hc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99 99999999999999999999999999988753
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=1.3e-29 Score=242.36 Aligned_cols=182 Identities=23% Similarity=0.184 Sum_probs=159.1
Q ss_pred CEeeccCCHHHHHHHHH----cCCCCcc----cCCCCCchHHHHHHHh---CCHHHHHHHHhcCCC--------------
Q 014068 1 MQACRYGHWEVVQTLLL----FRCNVTR----ADYLSGRTALHFAAVN---GHVRCIRLVVADFVP-------------- 55 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~----~gadi~~----~d~~~G~TpLh~Aa~~---G~~eiv~~LL~~~~~-------------- 55 (431)
|+||..|+.++|+.|++ .+++++. .+. .|+||||+|+.. |+.++|++|++.++.
T Consensus 18 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~-~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~ 96 (273)
T 2pnn_A 18 FDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPE-TGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTD 96 (273)
T ss_dssp HHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTT-TCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCS
T ss_pred HHHHHcCCHHHHHHHHHHHhhcccccCCcccccCc-CCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhccccc
Confidence 57999999999998887 4666652 354 899999999987 999999999987642
Q ss_pred CCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCC--------------CCchHHHHHHHcCCHHHHHHHHH---C
Q 014068 56 SVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAAD--------------GGITALHMAALNGYFDCVQLLLD---L 118 (431)
Q Consensus 56 ~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~--------------~G~TpLh~Aa~~g~~e~VklLL~---~ 118 (431)
.+..+.+++++|+..+..+.++.++..+ ..++.++. .|.||||+|+..|+.++|++|++ +
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~g---a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 173 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENG---ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQ 173 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCC---CCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccC
Confidence 3457999999999999999999888764 34677776 79999999999999999999999 9
Q ss_pred CCCCCcccccCCCccccCCCCCcHHHHHHhcCC---------HHHHHHHHHCCCCCc-------ccCCCCCcHHHHHHHh
Q 014068 119 HANVSAVTFHYGTSMDLIGAGSTPLHFAACGGN---------LKCCQVLLSRGASRM-------SLNCNGWLPLDVARMW 182 (431)
Q Consensus 119 Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~---------~eivklLL~~GAdin-------~~d~~G~TpLh~Aa~~ 182 (431)
|++++.+|.. |+||||+|+..|+ .+++++|+++|++++ .+|..|+||||+|+..
T Consensus 174 gad~~~~d~~----------g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 174 PADISARDSV----------GNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp CCCTTCCCTT----------SCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred CCCceeeCCC----------CCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 9999999976 9999999999998 899999999999997 4899999999999999
Q ss_pred CcHHHHHHhcCCCC
Q 014068 183 GRHWLEPLLAPSSD 196 (431)
Q Consensus 183 g~~~v~~LL~~~a~ 196 (431)
|+.+++++|++...
T Consensus 244 g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 244 GKIGVLAYILQREI 257 (273)
T ss_dssp TCHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHCCC
Confidence 99999877765433
No 50
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=1.7e-27 Score=220.38 Aligned_cols=204 Identities=16% Similarity=0.086 Sum_probs=170.6
Q ss_pred CchHHHHHHHhCCHHHHHHHHhcCCC----CCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcc-cCCCCchHHHHHH
Q 014068 30 GRTALHFAAVNGHVRCIRLVVADFVP----SVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNK-AADGGITALHMAA 104 (431)
Q Consensus 30 G~TpLh~Aa~~G~~eiv~~LL~~~~~----~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~-~d~~G~TpLh~Aa 104 (431)
|.||||+|+..|+.+++++|++.+.. .+..+.++++.++..+..+.++.++...... .++. .+..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV-NLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTC-CGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccc-cccccCCCCCCCHHHHHH
Confidence 78999999999999999999986542 5677899999999999999999888775322 2444 7889999999999
Q ss_pred HcCCHHHHHHHHHCC--CCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHh
Q 014068 105 LNGYFDCVQLLLDLH--ANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMW 182 (431)
Q Consensus 105 ~~g~~e~VklLL~~G--advn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~ 182 (431)
..|+.+++++|+++| ++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~----------g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 150 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQ----------GVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASV 150 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTT----------CCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcC----------CCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 999999999999999 888888866 99999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHhcCCC--CCCCCCCCCCCCCchhhhhHHHHHHHcCCccccccCCCCCchhhhhhccccchhccCCChHHHHH
Q 014068 183 GRHWLEPLLAPSS--DAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTTSSSDDADTCAVCLERACTVAAEGCRHELCVR 260 (431)
Q Consensus 183 g~~~v~~LL~~~a--~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~a~~~~~~~C~vcle~~~~va~~~CgH~~C~~ 260 (431)
|+.+++++|.+.. +++..+..+ .|++++|... |+..+++
T Consensus 151 ~~~~~v~~Ll~~g~~~~~~~d~~g--------~t~L~~A~~~-------------------------------~~~~~v~ 191 (228)
T 2dzn_A 151 GSLKLIELLCGLGKSAVNWQDKQG--------WTPLFHALAE-------------------------------GHGDAAV 191 (228)
T ss_dssp TCHHHHHHHHTTTCCCSCCCCTTS--------CCHHHHHHHT-------------------------------TCHHHHH
T ss_pred CCHHHHHHHHhcCcccccCcCCCC--------CCHHHHHHHc-------------------------------CCHHHHH
Confidence 9999988777654 333332222 2566666553 5666888
Q ss_pred HHH-HhhhcCCCCCCCCCCCCCCC
Q 014068 261 CAL-YLCSTNNIPSEMVGPPGSIP 283 (431)
Q Consensus 261 cll-~~ga~~n~~~~~~~~p~~~~ 283 (431)
.|+ +.|++++..+..+.+|...+
T Consensus 192 ~Ll~~~ga~~~~~~~~g~t~l~~A 215 (228)
T 2dzn_A 192 LLVEKYGAEYDLVDNKGAKAEDVA 215 (228)
T ss_dssp HHHHHHCCCSCCBCTTSCBGGGGC
T ss_pred HHHHhcCCCCCccCCCCCcHHHHH
Confidence 999 99999999888888887666
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=1.1e-27 Score=214.74 Aligned_cols=141 Identities=33% Similarity=0.398 Sum_probs=125.9
Q ss_pred hHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHH
Q 014068 32 TALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDC 111 (431)
Q Consensus 32 TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~ 111 (431)
++|+.||+.|+.++|++||++|++ +|.+|..|.||||+|+..++.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad---------------------------------vn~~d~~g~t~l~~a~~~~~~~~ 52 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD---------------------------------VNASDSDGRTPLHHAAENGHKEV 52 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC---------------------------------TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC---------------------------------CCCcCCCCCCHHHHHHHcCCHHH
Confidence 579999999999999999998775 88999999999999999999999
Q ss_pred HHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHh
Q 014068 112 VQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLL 191 (431)
Q Consensus 112 VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL 191 (431)
+++|+++|++++.++.. |+||||+|+..|+.++|++|+++|+++|.+|.+|+||||+|+..|+.+++++|
T Consensus 53 ~~~ll~~gad~~~~d~~----------g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~L 122 (169)
T 4gpm_A 53 VKLLISKGADVNAKDSD----------GRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLL 122 (169)
T ss_dssp HHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhcccchhhhccC----------CCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999976 99999999999999999999999999999999999999999999999997665
Q ss_pred -cCCCCCCCCCCCCCCCCchhhhhHHHHHHHcC
Q 014068 192 -APSSDAVMPRFHPSNYLSLPLLSVLNVARECG 223 (431)
Q Consensus 192 -~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G 223 (431)
..+++++..+..+. |++++|...|
T Consensus 123 l~~gad~~~~d~~G~--------TpL~~A~~~g 147 (169)
T 4gpm_A 123 ISKGADVNTSDSDGR--------TPLDLAREHG 147 (169)
T ss_dssp HHTTCCTTCCCTTSC--------CHHHHHHHTT
T ss_pred HHcCCCccccCCCCC--------CHHHHHHHcC
Confidence 45677666544433 6777776643
No 52
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=8e-28 Score=236.93 Aligned_cols=203 Identities=23% Similarity=0.163 Sum_probs=172.5
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcc---------------------------------cCCCCCchHHHHHHHhCCHHHHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTR---------------------------------ADYLSGRTALHFAAVNGHVRCIR 47 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~---------------------------------~d~~~G~TpLh~Aa~~G~~eiv~ 47 (431)
|+||..|+.++|++||++|++++. .|. .|+||||+|+..|+.++++
T Consensus 64 h~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~g~t~l~~A~~~~~~~~~~ 142 (337)
T 4g8k_A 64 HNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDF-YGFTAFMEAAVYGKVKALK 142 (337)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCT-TCCBHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhcc-CCCCHHHHHHHcCcHHHHH
Confidence 689999999999999999887653 444 7899999999999999999
Q ss_pred HHHhcCCCCC-------------CCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC----HH
Q 014068 48 LVVADFVPSV-------------PFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY----FD 110 (431)
Q Consensus 48 ~LL~~~~~~~-------------~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~----~e 110 (431)
+|+++++..+ ..+.++++.|+..++.+.++.++... ...++.+|..|.|+||+++..++ .+
T Consensus 143 ~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~--gad~n~~d~~g~t~l~~~~~~~~~~~~~~ 220 (337)
T 4g8k_A 143 FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM--GADVNACDNMGRNALIHALLSSDDSDVEA 220 (337)
T ss_dssp HHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHS--CCCTTCCCTTSCCHHHHHHHHSCTTTHHH
T ss_pred HHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhcc--CCCcCccCCCCCcHHHHHHHHcCcccHHH
Confidence 9998876432 34678999999999999998887542 33588999999999999887654 46
Q ss_pred HHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHC-CCCCcccCCCCCcHHHHHHHhCcHHHHH
Q 014068 111 CVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSR-GASRMSLNCNGWLPLDVARMWGRHWLEP 189 (431)
Q Consensus 111 ~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~-GAdin~~d~~G~TpLh~Aa~~g~~~v~~ 189 (431)
++++|+++|++++.++.. |+||||+|+..|+.+++++|++. |+++|.+|.+|+||||+|+..|+.++++
T Consensus 221 i~~lLl~~gad~n~~d~~----------g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~ 290 (337)
T 4g8k_A 221 ITHLLLDHGADVNVRGER----------GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 290 (337)
T ss_dssp HHHHHHHTTCCTTCCCGG----------GCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHHHHHHCCCCCCCcCCC----------CCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 899999999999999976 99999999999999999999986 8999999999999999999999999987
Q ss_pred HhcC-CCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccccc
Q 014068 190 LLAP-SSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTT 229 (431)
Q Consensus 190 LL~~-~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~ 229 (431)
+|++ |++++.. +++++|...|..+++.
T Consensus 291 ~Ll~~GAd~n~~-------------~~L~~A~~~~~~~iv~ 318 (337)
T 4g8k_A 291 LLCKRGASTDCG-------------DLVMTARRNYDHSLVK 318 (337)
T ss_dssp HHHTTSCSSTTC-------------CHHHHHHHTTCHHHHH
T ss_pred HHHHCCCCCCCC-------------CHHHHHHHcCCHHHHH
Confidence 6654 5665432 4788898888765543
No 53
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=7.5e-29 Score=239.26 Aligned_cols=184 Identities=24% Similarity=0.292 Sum_probs=157.4
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC---CCCCCcchhhHhhhcCChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVP---SVPFEVMNTQIEGDRGDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~---~~~~~~~~l~~a~~~~~~~~~~ 77 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|++++.. .+..+.+++++++..+....+.
T Consensus 78 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 156 (299)
T 1s70_B 78 HQACIDDNVDMVKFLVENGANINQPDN-EGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQ 156 (299)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHH
Confidence 679999999999999999999999997 999999999999999999999998764 3566889999998877777666
Q ss_pred hhhhhhhhhh------------------------hhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCcc
Q 014068 78 SKCDQSALSK------------------------FVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSM 133 (431)
Q Consensus 78 ~~~~~~~~~~------------------------~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~ 133 (431)
.++....... .....+..|.||||+|+..|+.++|++|+++|++++..|..
T Consensus 157 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~----- 231 (299)
T 1s70_B 157 NEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD----- 231 (299)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT-----
T ss_pred HHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCC-----
Confidence 5543321110 11235578999999999999999999999999999999876
Q ss_pred ccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCC
Q 014068 134 DLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSS 195 (431)
Q Consensus 134 ~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a 195 (431)
|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+......+.+++....
T Consensus 232 -----g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~~l~~~~~ 288 (299)
T 1s70_B 232 -----GWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQN 288 (299)
T ss_dssp -----CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHHHHHHHTT
T ss_pred -----CCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999998876666666665543
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=1.9e-29 Score=239.12 Aligned_cols=181 Identities=20% Similarity=0.153 Sum_probs=157.5
Q ss_pred CEeeccCCHHHHH----HHHHcCCCCcccCC---CCCchHHHHHH---HhCCHHHHHHHHhcCCC--------------C
Q 014068 1 MQACRYGHWEVVQ----TLLLFRCNVTRADY---LSGRTALHFAA---VNGHVRCIRLVVADFVP--------------S 56 (431)
Q Consensus 1 H~Aa~~G~~evVk----~LL~~gadi~~~d~---~~G~TpLh~Aa---~~G~~eiv~~LL~~~~~--------------~ 56 (431)
|.||..|+.+.|+ +|++.|++++..+. ..|+||||+|+ ..|+.+++++|++.++. .
T Consensus 10 ~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~ 89 (260)
T 3jxi_A 10 FDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDV 89 (260)
T ss_dssp HHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCS
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccccccc
Confidence 5689999999554 45558999997762 37999999999 67999999999986532 2
Q ss_pred CCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccC--------------CCCchHHHHHHHcCCHHHHHHHHH---CC
Q 014068 57 VPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAA--------------DGGITALHMAALNGYFDCVQLLLD---LH 119 (431)
Q Consensus 57 ~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d--------------~~G~TpLh~Aa~~g~~e~VklLL~---~G 119 (431)
+..+.+++++|+..++.+.++.++..+ ..++.++ ..|.||||+|+..|+.++|++|++ +|
T Consensus 90 d~~g~t~L~~A~~~g~~~~v~~Ll~~g---a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 166 (260)
T 3jxi_A 90 YYRGQTALHIAIERRCKHYVELLVEKG---ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166 (260)
T ss_dssp SEESBCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhCC---CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 237889999999999999999988764 3467777 579999999999999999999999 99
Q ss_pred CCCCcccccCCCccccCCCCCcHHHHHHhcCC---------HHHHHHHHHCCCCC-------cccCCCCCcHHHHHHHhC
Q 014068 120 ANVSAVTFHYGTSMDLIGAGSTPLHFAACGGN---------LKCCQVLLSRGASR-------MSLNCNGWLPLDVARMWG 183 (431)
Q Consensus 120 advn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~---------~eivklLL~~GAdi-------n~~d~~G~TpLh~Aa~~g 183 (431)
++++.+|.. |+||||+|+..|+ .+++++|+++|+++ +.+|..|+||||+|+..|
T Consensus 167 a~~~~~d~~----------g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 236 (260)
T 3jxi_A 167 ADLRRQDSR----------GNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG 236 (260)
T ss_dssp CCTTCCCTT----------SCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred CCCcccCCC----------CCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcC
Confidence 999999976 9999999999888 79999999999999 679999999999999999
Q ss_pred cHHHHHHhcCC
Q 014068 184 RHWLEPLLAPS 194 (431)
Q Consensus 184 ~~~v~~LL~~~ 194 (431)
+.+++++|++.
T Consensus 237 ~~~~v~~Ll~~ 247 (260)
T 3jxi_A 237 KIGIFQHIIRR 247 (260)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHh
Confidence 99998877654
No 55
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=2.4e-28 Score=236.28 Aligned_cols=209 Identities=14% Similarity=0.034 Sum_probs=163.3
Q ss_pred CHHHHHHHHhcC-CCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCC
Q 014068 42 HVRCIRLVVADF-VPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHA 120 (431)
Q Consensus 42 ~~eiv~~LL~~~-~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Ga 120 (431)
..+++++|.+.. ...+..+.++++.|+..+..+.++.++..+. .++.. +|.||||+|+..|+.++|++|+++|+
T Consensus 12 ~~~v~~lL~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~---~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga 86 (285)
T 3kea_A 12 SKQLKSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGA---LKNLL--ENEFPLHQAATLEDTKIVKILLFSGL 86 (285)
T ss_dssp HHHHHHHHHSTTTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTG---GGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCC---CCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 345566665532 3456778999999999999999999887643 35555 49999999999999999999999999
Q ss_pred CCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCC-CcHHHHHHHhCcHHHHHHhcCCCCCCC
Q 014068 121 NVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNG-WLPLDVARMWGRHWLEPLLAPSSDAVM 199 (431)
Q Consensus 121 dvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G-~TpLh~Aa~~g~~~v~~LL~~~a~~~~ 199 (431)
+++..+.. |.||||+|+..|+.+++++|+++|++++.+|..| .||||+|+..|+.+++++|........
T Consensus 87 ~~~~~d~~----------g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 156 (285)
T 3kea_A 87 DDSQFDDK----------GNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156 (285)
T ss_dssp CTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC
T ss_pred CCCCcCCC----------CCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc
Confidence 99998876 9999999999999999999999999999999999 799999999999999887776643321
Q ss_pred CCCCCCCCCchhhhhHHHHHHHcCCccccccCCCC---Cchhhhhhccc-cchhccCCChHHHHHHHHHhhhcCCCCCC
Q 014068 200 PRFHPSNYLSLPLLSVLNVARECGLLSSTTSSSDD---ADTCAVCLERA-CTVAAEGCRHELCVRCALYLCSTNNIPSE 274 (431)
Q Consensus 200 ~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~a~~~~---~~~C~vcle~~-~~va~~~CgH~~C~~cll~~ga~~n~~~~ 274 (431)
.. ..+.|++++|...|..+++...... .........++ ...|+.. ||..++++|++.|++++..+.
T Consensus 157 ~~--------~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~-~~~~~v~~Ll~~gad~~~~~~ 226 (285)
T 3kea_A 157 DL--------AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDN-KDIEMLQALFKYDINIYSANL 226 (285)
T ss_dssp CC--------STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHH-TCHHHHHHHTTSCBCSTTTTG
T ss_pred cc--------cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHc-CCHHHHHHHHHcCCCCCCCCh
Confidence 11 0356899999999987665421100 00000011244 6777777 888899999999999987663
No 56
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=2.9e-28 Score=233.04 Aligned_cols=228 Identities=15% Similarity=0.034 Sum_probs=154.6
Q ss_pred CCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhc----CCC-------CCCCCcchhhHhhhc---CChhhHHhhhhhhh
Q 014068 19 RCNVTRADYLSGRTALHFAAVNGHVRCIRLVVAD----FVP-------SVPFEVMNTQIEGDR---GDGSSVKSKCDQSA 84 (431)
Q Consensus 19 gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~----~~~-------~~~~~~~~l~~a~~~---~~~~~~~~~~~~~~ 84 (431)
++..+..|. .|+||||+|+..|+.++|+.|++. +.. .+..+.+++++|+.. +..+.++.++..+.
T Consensus 3 ~a~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga 81 (273)
T 2pnn_A 3 SAGEKPPRL-YDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR 81 (273)
T ss_dssp --------C-CCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred cccCCCCCc-ccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence 456666776 999999999999999999999863 322 256889999999976 88899988887754
Q ss_pred hh----hhhcc----cCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCcc----ccCCCCCcHHHHHHhcCCH
Q 014068 85 LS----KFVNK----AADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSM----DLIGAGSTPLHFAACGGNL 152 (431)
Q Consensus 85 ~~----~~in~----~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~----~~~~~G~TpLh~Aa~~g~~ 152 (431)
.. .+++. +|..|.||||+|+..|+.++|++||++|++++..+....... .....|.||||+|+..|+.
T Consensus 82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~ 161 (273)
T 2pnn_A 82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL 161 (273)
T ss_dssp HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH
T ss_pred cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCH
Confidence 21 12333 667899999999999999999999999999999885100000 0001399999999999999
Q ss_pred HHHHHHHH---CCCCCcccCCCCCcHHHHHHHhCc---------HHHHHHhc-CCCCCCCCCCCCCCCCchhhhhHHHHH
Q 014068 153 KCCQVLLS---RGASRMSLNCNGWLPLDVARMWGR---------HWLEPLLA-PSSDAVMPRFHPSNYLSLPLLSVLNVA 219 (431)
Q Consensus 153 eivklLL~---~GAdin~~d~~G~TpLh~Aa~~g~---------~~v~~LL~-~~a~~~~~~~~~~~~~~~~l~t~l~~A 219 (431)
+++++|++ +|++++.+|..|+||||+|+..|+ .+++++|+ .+++++....
T Consensus 162 ~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~----------------- 224 (273)
T 2pnn_A 162 AIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLK----------------- 224 (273)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCC-----------------
T ss_pred HHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccc-----------------
Confidence 99999999 999999999999999999999987 56665554 3444432000
Q ss_pred HHcCCccccccCCCCCchhhhhhccccchhccCCChHHHHHHHHHhhh-cCCCCCCCCCCC
Q 014068 220 RECGLLSSTTSSSDDADTCAVCLERACTVAAEGCRHELCVRCALYLCS-TNNIPSEMVGPP 279 (431)
Q Consensus 220 ~~~G~~~~~~a~~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga-~~n~~~~~~~~p 279 (431)
+.. ..+... .+++..|+.. ||..+++.|++.|+ +|...+....+|
T Consensus 225 -------~~~-~~d~~g------~TpL~~A~~~-g~~~iv~~Ll~~ga~dp~~~~~~~~~~ 270 (273)
T 2pnn_A 225 -------LEE-ITNRKG------LTPLALAASS-GKIGVLAYILQREIHEPECRHAAAHHH 270 (273)
T ss_dssp -------GGG-CCCTTS------CCHHHHHHHT-TCHHHHHHHHHHHTC------------
T ss_pred -------ccc-ccCCCC------CCHHHHHHHh-ChHHHHHHHHHCCCCCchhhhhhhhhc
Confidence 000 000000 2344444444 77788999999999 776655544433
No 57
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=4.2e-27 Score=218.86 Aligned_cols=212 Identities=18% Similarity=0.128 Sum_probs=159.0
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhc-CCC---CCCCCcchhhHhhhcCChhhHHhhhhhhhhh--hhhcccCCCCchHHHH
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVAD-FVP---SVPFEVMNTQIEGDRGDGSSVKSKCDQSALS--KFVNKAADGGITALHM 102 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~-~~~---~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~--~~in~~d~~G~TpLh~ 102 (431)
.|+||||+|+..|+.+++++|++. +.. .+..+.+++++|+..++.+.++.++...... ...+.+|..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 589999999999999999999986 543 4567889999999999999999888765432 1126677899999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCcccccCCCcc---ccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHH
Q 014068 103 AALNGYFDCVQLLLDLHANVSAVTFHYGTSM---DLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVA 179 (431)
Q Consensus 103 Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~---~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~A 179 (431)
|+..|+.++|++|+++|++++..+....... .....|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999998764210000 0012499999999999999999999999999999999999999999
Q ss_pred HHhCcHHHH----HHhcC-CCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccccccCCCCCchhhhhhccccchhccCCC
Q 014068 180 RMWGRHWLE----PLLAP-SSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTTSSSDDADTCAVCLERACTVAAEGCR 254 (431)
Q Consensus 180 a~~g~~~v~----~LL~~-~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~a~~~~~~~C~vcle~~~~va~~~Cg 254 (431)
+..|+.+++ ++|.. +++....... +.....+.|++++ |+.. |
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~--~~~~~~g~tpl~~------------------------------A~~~-g 208 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGDHLKSLE--LVPNNQGLTPFKL------------------------------AGVE-G 208 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSCSSCCGG--GCCCTTSCCHHHH------------------------------HHHH-T
T ss_pred HHcCChHHHHHHHHHHHhcCCchhhhhhh--ccCCCCCCCHHHH------------------------------HHHc-C
Confidence 999998876 55544 4444211000 0000011134444 4444 7
Q ss_pred hHHHHHHHHHhhhcCCCCC
Q 014068 255 HELCVRCALYLCSTNNIPS 273 (431)
Q Consensus 255 H~~C~~cll~~ga~~n~~~ 273 (431)
|..+++.|++.|+......
T Consensus 209 ~~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 209 NIVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp CHHHHHHHHHHHHHC----
T ss_pred CHHHHHHHHhcCccchhhh
Confidence 7778899999998875443
No 58
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=221.92 Aligned_cols=183 Identities=22% Similarity=0.199 Sum_probs=164.9
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~~~~~~ 77 (431)
|+|+..|+.++|++|+++|++++..+...|.||||+|+..|+.+++++|++.+... +..+.++++.++..+....++
T Consensus 47 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 126 (240)
T 3eu9_A 47 HWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVA 126 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHH
Confidence 57899999999999999999999877657999999999999999999999977654 456789999999999999998
Q ss_pred hhhhhhhhhhhhcccCCCCchHHHHHHHcCC-HHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHH
Q 014068 78 SKCDQSALSKFVNKAADGGITALHMAALNGY-FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQ 156 (431)
Q Consensus 78 ~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~-~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivk 156 (431)
.++..+. .++.++..|.||||+|+..++ .+++++|++.|++++..+.. .|.||||+|+..|+.++++
T Consensus 127 ~Ll~~~~---~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~---------~g~t~L~~A~~~~~~~~v~ 194 (240)
T 3eu9_A 127 YLIAKGQ---DVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKY---------HKNTALHWAVLAGNTTVIS 194 (240)
T ss_dssp HHHHTTC---CTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTT---------TCCCHHHHHHHHTCHHHHH
T ss_pred HHHhcCC---CccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhcc---------CCCcHHHHHHHcCCHHHHH
Confidence 8877543 478889999999999997776 89999999999999998862 3999999999999999999
Q ss_pred HHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCC
Q 014068 157 VLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSS 195 (431)
Q Consensus 157 lLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a 195 (431)
+|+++|++++.+|..|+||||+|+..|+.+++++|.+..
T Consensus 195 ~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 195 LLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp HHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhh
Confidence 999999999999999999999999999999988886543
No 59
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=2.2e-27 Score=234.10 Aligned_cols=193 Identities=12% Similarity=0.032 Sum_probs=147.4
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcc-cCCCCCchHHHHHHHhCCHHHHHHHHhcCCCC---CCCCcchhhHhhhcCC---h
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTR-ADYLSGRTALHFAAVNGHVRCIRLVVADFVPS---VPFEVMNTQIEGDRGD---G 73 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~-~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~---~~~~~~~l~~a~~~~~---~ 73 (431)
|+|+..+..+++++|++.|++++. .|. .|+||||+|+..|+.++|++|+++++.. +..+.+++|+|+..++ .
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~dvn~~~d~-~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLNLNIPVDE-HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCCSCSCCST-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred HHHHHhhHHHHHHHHHhcCCCcccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 345566667899999999999999 786 9999999999999999999999988764 5668899999999877 4
Q ss_pred hhHHhhhhhhhhhhhhcccCCCCchHHHHHHH----cCCHHHHHHHHHC--------------------CCCCCcccccC
Q 014068 74 SSVKSKCDQSALSKFVNKAADGGITALHMAAL----NGYFDCVQLLLDL--------------------HANVSAVTFHY 129 (431)
Q Consensus 74 ~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~----~g~~e~VklLL~~--------------------Gadvn~~d~~~ 129 (431)
..+..++.... ..++.+|..|.||||+|+. .|+.+++++|++. |++++..+..
T Consensus 181 ~~~~~ll~~~~--~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~- 257 (327)
T 1sw6_A 181 GTFEALLDYLY--PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGE- 257 (327)
T ss_dssp TCHHHHHHHHG--GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred HHHHHHHHhhh--ccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccccccc-
Confidence 44444444332 2488999999999999999 9999999999987 8889888866
Q ss_pred CCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHh-cCCCCCCCCCCCCCCCC
Q 014068 130 GTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLL-APSSDAVMPRFHPSNYL 208 (431)
Q Consensus 130 ~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL-~~~a~~~~~~~~~~~~~ 208 (431)
|.||||+|+. +++|+++ +++.+|..|+||||+|+..|+.+++++| ..+++++..+..+.
T Consensus 258 ---------g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~--- 317 (327)
T 1sw6_A 258 ---------RKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGL--- 317 (327)
T ss_dssp -----------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSC---
T ss_pred ---------CCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC---
Confidence 9999999985 8999998 6888999999999999999999987655 55777776655443
Q ss_pred chhhhhHHHHHHHc
Q 014068 209 SLPLLSVLNVAREC 222 (431)
Q Consensus 209 ~~~l~t~l~~A~~~ 222 (431)
|++++|.+.
T Consensus 318 -----TpL~~A~~~ 326 (327)
T 1sw6_A 318 -----RPVDFGAGL 326 (327)
T ss_dssp -----CGGGGTCC-
T ss_pred -----CHHHHHHhc
Confidence 556666544
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=1.4e-26 Score=209.70 Aligned_cols=151 Identities=23% Similarity=0.197 Sum_probs=130.3
Q ss_pred CCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccc
Q 014068 55 PSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMD 134 (431)
Q Consensus 55 ~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~ 134 (431)
..+..+.++++.|+..+....++.++... ..++.+|..|.||||+|+..|+.++|++|+++|++++..+..
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~------ 100 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENF---DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFS------ 100 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHH---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhc---cccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC------
Confidence 45678999999999999999999888764 357888999999999999999999999999999999999876
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhc-CCCCCCCCCCCCCCCCchhhh
Q 014068 135 LIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLA-PSSDAVMPRFHPSNYLSLPLL 213 (431)
Q Consensus 135 ~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~-~~a~~~~~~~~~~~~~~~~l~ 213 (431)
|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|. .+++++..+..+.
T Consensus 101 ----g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~-------- 168 (192)
T 2rfm_A 101 ----GKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGL-------- 168 (192)
T ss_dssp ----SCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSC--------
T ss_pred ----CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC--------
Confidence 999999999999999999999999999999999999999999999999976665 4566655443322
Q ss_pred hHHHHHHHcCCcc
Q 014068 214 SVLNVARECGLLS 226 (431)
Q Consensus 214 t~l~~A~~~G~~~ 226 (431)
|++++|...|..+
T Consensus 169 t~l~~A~~~~~~~ 181 (192)
T 2rfm_A 169 TAEASARIFGRQE 181 (192)
T ss_dssp BHHHHHHHTTCHH
T ss_pred CHHHHHHHhCcHH
Confidence 6777777765443
No 61
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=1.2e-26 Score=216.89 Aligned_cols=194 Identities=19% Similarity=0.126 Sum_probs=155.6
Q ss_pred ccCCCCCchHHHHHHHhCCHHHHHHHHhcCC-------CCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCC
Q 014068 24 RADYLSGRTALHFAAVNGHVRCIRLVVADFV-------PSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGG 96 (431)
Q Consensus 24 ~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~-------~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G 96 (431)
..|. +|.||||+|+..|+.+++++|++.+. ..+..+.+++++|+..+....++.++..+ ..++.+|..|
T Consensus 3 ~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g 78 (236)
T 1ikn_D 3 QLTE-DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG---CDPELRDFRG 78 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCC---CCSCCCCTTC
T ss_pred cCCC-CCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCcCCCC
Confidence 3455 89999999999999999999997543 34566889999999999999998887654 3578889999
Q ss_pred chHHHHHHHcCCHHHHHHHHHCCCCC------CcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCC
Q 014068 97 ITALHMAALNGYFDCVQLLLDLHANV------SAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNC 170 (431)
Q Consensus 97 ~TpLh~Aa~~g~~e~VklLL~~Gadv------n~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~ 170 (431)
.||||+|+..|+.+++++|+++|++. +..+. .|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 148 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY----------NGHTCLHLASIHGYLGIVELLVSLGADVNAQEP 148 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT----------TCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999999863 34443 399999999999999999999999999999997
Q ss_pred -CCCcHHHHHHHhCcHHHHHHhcC-CCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccccccCCCCCchhhhhhccccch
Q 014068 171 -NGWLPLDVARMWGRHWLEPLLAP-SSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTTSSSDDADTCAVCLERACTV 248 (431)
Q Consensus 171 -~G~TpLh~Aa~~g~~~v~~LL~~-~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~a~~~~~~~C~vcle~~~~v 248 (431)
.|+||||+|+..|+.+++++|+. +++++..+.. | .++..+
T Consensus 149 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~-------------------g-------------------~tpl~~ 190 (236)
T 1ikn_D 149 CNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQ-------------------G-------------------YSPYQL 190 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTT-------------------C-------------------CCGGGG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCC-------------------C-------------------CCHHHH
Confidence 99999999999999999776654 4444332211 1 144455
Q ss_pred hccCCChHHHHHHHHHhhhcCC
Q 014068 249 AAEGCRHELCVRCALYLCSTNN 270 (431)
Q Consensus 249 a~~~CgH~~C~~cll~~ga~~n 270 (431)
|+.. ||..++++|++.|+++.
T Consensus 191 A~~~-~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 191 TWGR-PSTRIQQQLGQLTLENL 211 (236)
T ss_dssp CTTS-SCHHHHHHHHTTSCGGG
T ss_pred HHcc-CchHHHHHHHHcchhhh
Confidence 5555 88889999999999875
No 62
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=3.3e-27 Score=222.23 Aligned_cols=154 Identities=21% Similarity=0.232 Sum_probs=115.5
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|.|+..|+.++++.||++|++++.. . .|.||||+|+..|+.++|++|++.+..
T Consensus 10 ~~a~~~~~~~~~~~ll~~g~~~~~~-~-~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------- 62 (239)
T 1ycs_B 10 PPGKRTNLRKTGSERIAHGMRVKFN-P-LPLALLLDSSLEGEFDLVQRIIYEVDD------------------------- 62 (239)
T ss_dssp -----------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-------------------------
T ss_pred chhhhhhhHHHHHHHhccCCCcccC-c-hhhHHHHHHHHcCCHHHHHHHHHcCCC-------------------------
Confidence 6899999999999999999999865 3 799999999999999999999987654
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 160 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~ 160 (431)
++.+|..|.||||+|+..|+.++|++|+++|++++.+|.. |+||||+|+..|+.+++++|++
T Consensus 63 --------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~----------g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 63 --------PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSD----------GWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp --------CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT----------CCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC----------CCCHHHHHHHcCCHHHHHHHHH
Confidence 7888999999999999999999999999999999999976 9999999999999999999999
Q ss_pred CCCCCcccCCCCC-cHHHHH--HHhCcHHHHHHhcC-CCCCCC
Q 014068 161 RGASRMSLNCNGW-LPLDVA--RMWGRHWLEPLLAP-SSDAVM 199 (431)
Q Consensus 161 ~GAdin~~d~~G~-TpLh~A--a~~g~~~v~~LL~~-~a~~~~ 199 (431)
+|++++.+|..|. ||||+| +..|+.+++++|.. +++.+.
T Consensus 125 ~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 125 SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp TTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTT
T ss_pred cCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccc
Confidence 9999999998877 999999 78899998776654 444433
No 63
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=1.3e-26 Score=198.84 Aligned_cols=131 Identities=24% Similarity=0.211 Sum_probs=121.8
Q ss_pred CCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCch
Q 014068 19 RCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGIT 98 (431)
Q Consensus 19 gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~T 98 (431)
+++++..+. .|.||||+|+..|+.+++++|++++.. ++.+|..|.|
T Consensus 2 ~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------------------------------~~~~~~~g~t 47 (136)
T 1d9s_A 2 SPGIHMLGG-SSDAGLATAAARGQVETVRQLLEAGAD---------------------------------PNALNRFGRR 47 (136)
T ss_dssp CCCCSCCCC-CCSCHHHHHHHTTCHHHHHHHHHTTCC---------------------------------TTCCCTTCCT
T ss_pred CCCccCCCC-CCccHHHHHHHcCCHHHHHHHHHcCCC---------------------------------cCCcCCCCCC
Confidence 578898987 999999999999999999999987654 7888999999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHH
Q 014068 99 ALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDV 178 (431)
Q Consensus 99 pLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~ 178 (431)
|||+|+. |+.+++++|+++|++++..+.. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 48 ~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~---------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 117 (136)
T 1d9s_A 48 PIQVMMM-GSAQVAELLLLHGAEPNCADPA---------TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDL 117 (136)
T ss_dssp TTTTSTT-SCHHHHHHHHHHTCCSSCCBTT---------TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHH
T ss_pred HHHHHHc-CCHHHHHHHHHCCCCCCCcCCC---------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHH
Confidence 9999999 9999999999999999998843 28999999999999999999999999999999999999999
Q ss_pred HHHhCcHHHHHHhcC
Q 014068 179 ARMWGRHWLEPLLAP 193 (431)
Q Consensus 179 Aa~~g~~~v~~LL~~ 193 (431)
|+..++.+++++|.+
T Consensus 118 A~~~~~~~~~~~Ll~ 132 (136)
T 1d9s_A 118 AEEQGHRDIARYLHA 132 (136)
T ss_dssp HHHHTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHH
Confidence 999999999887754
No 64
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=2.5e-27 Score=215.64 Aligned_cols=148 Identities=11% Similarity=0.055 Sum_probs=132.0
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCH----HHHHHHHhcCCCCCCCCcchhhHhhhcCChhhH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHV----RCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSV 76 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~----eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~ 76 (431)
|.||+.|+.+.++.|+..+.+ ..++..|+||||+|+.+|+. +++++|+++|++
T Consensus 11 ~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad--------------------- 67 (186)
T 3t8k_A 11 SAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD--------------------- 67 (186)
T ss_dssp HHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC---------------------
T ss_pred HHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC---------------------
Confidence 358899999999999987754 44422799999999999985 599999998876
Q ss_pred HhhhhhhhhhhhhcccCCCCchHHHHHHHcCC------HHHHHHHHHCCCCCCcccccCCCccccCCCCC-cHHHHHHhc
Q 014068 77 KSKCDQSALSKFVNKAADGGITALHMAALNGY------FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGS-TPLHFAACG 149 (431)
Q Consensus 77 ~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~------~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~-TpLh~Aa~~ 149 (431)
+|.+|..|.||||+|+..|+ .++|++||++|+++|.+|.. |. ||||+|+..
T Consensus 68 ------------vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~----------g~ttpLh~A~~~ 125 (186)
T 3t8k_A 68 ------------IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKP----------YKIVVFKNIFNY 125 (186)
T ss_dssp ------------SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGG----------GTBCTTGGGGGC
T ss_pred ------------CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCC----------cCchHHHHHHHc
Confidence 89999999999999999987 68899999999999999977 99 999999994
Q ss_pred C-----CHHHHHHHHH-CCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcC
Q 014068 150 G-----NLKCCQVLLS-RGASRMSLNCNGWLPLDVARMWGRHWLEPLLAP 193 (431)
Q Consensus 150 g-----~~eivklLL~-~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~ 193 (431)
+ +.+++++|++ +|++++.+|..|+||||+|+..|+.+++++|..
T Consensus 126 ~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 126 FVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp CSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4 4679999999 999999999999999999999999999988864
No 65
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=4.6e-26 Score=215.70 Aligned_cols=212 Identities=15% Similarity=0.033 Sum_probs=154.1
Q ss_pred CCchHHHHHHHhCCHHHHHHHH----hcCCCCC-------CCCcchhhHhh---hcCChhhHHhhhhhhhh--------h
Q 014068 29 SGRTALHFAAVNGHVRCIRLVV----ADFVPSV-------PFEVMNTQIEG---DRGDGSSVKSKCDQSAL--------S 86 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL----~~~~~~~-------~~~~~~l~~a~---~~~~~~~~~~~~~~~~~--------~ 86 (431)
.|+|+||.|+..|+.++++.|+ +.+...+ ..+.+++++|+ ..+..+.++.++..... .
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 7899999999999999655555 4666554 55889999998 67889999888876542 1
Q ss_pred hhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCcc----ccCCCCCcHHHHHHhcCCHHHHHHHHH--
Q 014068 87 KFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSM----DLIGAGSTPLHFAACGGNLKCCQVLLS-- 160 (431)
Q Consensus 87 ~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~----~~~~~G~TpLh~Aa~~g~~eivklLL~-- 160 (431)
..++..|..|.||||+|+..|+.++|++|+++|++++..+....... .....|.||||+|+..|+.++|++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 22455556899999999999999999999999999999883100000 000139999999999999999999999
Q ss_pred -CCCCCcccCCCCCcHHHHHHHhCc---------HHHHHHhc-CCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccccc
Q 014068 161 -RGASRMSLNCNGWLPLDVARMWGR---------HWLEPLLA-PSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTT 229 (431)
Q Consensus 161 -~GAdin~~d~~G~TpLh~Aa~~g~---------~~v~~LL~-~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~ 229 (431)
+|++++.+|..|+||||+|+..++ .+++++|+ .+++++.... ...
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~------------------------~~~ 219 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTN------------------------LEA 219 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCC------------------------GGG
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccc------------------------hhh
Confidence 999999999999999999999887 56665554 4444421000 000
Q ss_pred cCCCCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCC
Q 014068 230 SSSDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIP 272 (431)
Q Consensus 230 a~~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~ 272 (431)
..+... .+++..|+.. ||..+++.|++.|.++..+
T Consensus 220 -~~d~~g------~tpL~~A~~~-g~~~~v~~Ll~~g~~~~~~ 254 (260)
T 3jxi_A 220 -LLNNDG------LSPLMMAAKT-GKIGIFQHIIRREIADAAA 254 (260)
T ss_dssp -CCCTTS------CCHHHHHHHT-TCHHHHHHHHHHHHHHHC-
T ss_pred -cccCCC------CCHHHHHHHc-CCHHHHHHHHHhCCCcccc
Confidence 000000 2344444444 7777899999999887543
No 66
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=6.8e-26 Score=200.38 Aligned_cols=148 Identities=20% Similarity=0.209 Sum_probs=129.3
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 108 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 108 (431)
.|.||||+|+..|+.+++++|++.+.. ++.+|..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~---------------------------------~~~~~~~g~t~L~~A~~~~~ 48 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV---------------------------------INHTDEEGFTPLMWAAAHGQ 48 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC---------------------------------TTCCCTTSCCHHHHHHHTTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC---------------------------------cCCCCCCCCCHHHHHHHCCC
Confidence 689999999999999999999987553 78889999999999999999
Q ss_pred HHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHH
Q 014068 109 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 188 (431)
Q Consensus 109 ~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~ 188 (431)
.++|++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 49 ~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 118 (167)
T 3v31_A 49 IAVVEFLLQNGADPQLLGKG----------RESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCV 118 (167)
T ss_dssp HHHHHHHHHTTCCTTCCCTT----------CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCC----------CCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999998866 99999999999999999999999999999999999999999999999997
Q ss_pred HHhc-CCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccc
Q 014068 189 PLLA-PSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSS 227 (431)
Q Consensus 189 ~LL~-~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~ 227 (431)
++|. .+++++..+..+. +++++|...|..++
T Consensus 119 ~~Ll~~g~~~~~~~~~g~--------t~l~~A~~~~~~~~ 150 (167)
T 3v31_A 119 KMLLESGADPTIETDSGY--------NSMDLAVALGYRSV 150 (167)
T ss_dssp HHHHHTTCCTTCCCTTSC--------CHHHHHHHHTCHHH
T ss_pred HHHHHcCCCCCCcCCCCC--------CHHHHHHHcCcHHH
Confidence 6665 5666655443322 67777777655443
No 67
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=4.1e-26 Score=215.81 Aligned_cols=169 Identities=19% Similarity=0.068 Sum_probs=135.3
Q ss_pred CCchHHHHHHHhCCHH----HHHHHHhcCCC-------CCCCCcchhhHhhhc---CChhhHHhhhhhhhhhhh----hc
Q 014068 29 SGRTALHFAAVNGHVR----CIRLVVADFVP-------SVPFEVMNTQIEGDR---GDGSSVKSKCDQSALSKF----VN 90 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~e----iv~~LL~~~~~-------~~~~~~~~l~~a~~~---~~~~~~~~~~~~~~~~~~----in 90 (431)
.|+||||+|+..|+.+ ++++|++++.. .+..+.+++++|+.. +..+.++.++..+..... ++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 4899999999999997 66777777765 355789999999999 999999988876543221 11
Q ss_pred ----ccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccC---CCCCcHHHHHHhcCCHHHHHHHHH---
Q 014068 91 ----KAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLI---GAGSTPLHFAACGGNLKCCQVLLS--- 160 (431)
Q Consensus 91 ----~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~---~~G~TpLh~Aa~~g~~eivklLL~--- 160 (431)
.+|..|.||||+|+..|+.++|++|+++|++++..+.......+.. ..|.||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 2446799999999999999999999999999999885311111110 129999999999999999999999
Q ss_pred CCCCCcccCCCCCcHHHHHHH--hCcHH-------HHHHhcC-CCCC
Q 014068 161 RGASRMSLNCNGWLPLDVARM--WGRHW-------LEPLLAP-SSDA 197 (431)
Q Consensus 161 ~GAdin~~d~~G~TpLh~Aa~--~g~~~-------v~~LL~~-~a~~ 197 (431)
+|++++.+|..|+||||+|+. .++.+ ++++|.. ++++
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 999999999999999999999 77777 7665543 4444
No 68
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.6e-26 Score=198.19 Aligned_cols=132 Identities=29% Similarity=0.369 Sum_probs=117.8
Q ss_pred CCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCch
Q 014068 19 RCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGIT 98 (431)
Q Consensus 19 gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~T 98 (431)
|+|+ .+|. .|+||||+|+..|+.+++++|++.+.. ++.+|..|.|
T Consensus 1 G~d~-~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~---------------------------------~~~~~~~g~t 45 (137)
T 3c5r_A 1 GIDP-FTNH-RGETLLHIASIKGDIPSVEYLLQNGSD---------------------------------PNVKDHAGWT 45 (137)
T ss_dssp ---C-CCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCC---------------------------------SCCCCTTSCC
T ss_pred CCCC-CcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC---------------------------------CCcCCCCCCC
Confidence 5677 5665 899999999999999999999987654 7888899999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHH
Q 014068 99 ALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDV 178 (431)
Q Consensus 99 pLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~ 178 (431)
|||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+
T Consensus 46 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 115 (137)
T 3c5r_A 46 PLHEACNHGHLKVVELLLQHKALVNTTGYQ----------NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDY 115 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCGG----------GCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred HHHHHHHcCCHHHHHHHHHcCCcccCcCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 999999999999999999999999999876 9999999999999999999999999999999999999999
Q ss_pred HHHhCcHHHHHHhcCCC
Q 014068 179 ARMWGRHWLEPLLAPSS 195 (431)
Q Consensus 179 Aa~~g~~~v~~LL~~~a 195 (431)
|+..++.+++.+|.+..
T Consensus 116 A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 116 TDDESMKSLLLLPEKNE 132 (137)
T ss_dssp CCCHHHHHHHSCC----
T ss_pred HhhccHHHHHhhccccc
Confidence 99999999988887654
No 69
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=2.5e-25 Score=197.63 Aligned_cols=164 Identities=18% Similarity=0.123 Sum_probs=136.3
Q ss_pred CchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCH
Q 014068 30 GRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYF 109 (431)
Q Consensus 30 G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~ 109 (431)
+.||||+|+..|+.+++++|++.+.. .++.+|..|.||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~--------------------------------~~~~~~~~g~t~L~~A~~~~~~ 49 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDN--------------------------------LVNKPDERGFTPLIWASAFGEI 49 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSG--------------------------------GGGCCCTTSCCHHHHHHHTTCH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcc--------------------------------cccCCCCCCCCHHHHHHHcCCH
Confidence 57899999999999999999976432 2678899999999999999999
Q ss_pred HHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHH
Q 014068 110 DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEP 189 (431)
Q Consensus 110 e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~ 189 (431)
++|++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 50 ~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 119 (172)
T 3v30_A 50 ETVRFLLEWGADPHILAKE----------RESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVE 119 (172)
T ss_dssp HHHHHHHHHTCCTTCCCTT----------CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHcCCCchhhccc----------CCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999999876 999999999999999999999999999999999999999999999999976
Q ss_pred Hhc-CCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccccccCCCCCchhhhhhccccchhccCCChHHHHHHHHHhhhc
Q 014068 190 LLA-PSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTTSSSDDADTCAVCLERACTVAAEGCRHELCVRCALYLCST 268 (431)
Q Consensus 190 LL~-~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~a~~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~ 268 (431)
+|. .+++++..+..+. |++++|... |+..+++.|++.+++
T Consensus 120 ~Ll~~ga~~~~~~~~g~--------t~l~~A~~~-------------------------------~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 120 ALLARGADLTTEADSGY--------TPMDLAVAL-------------------------------GYRKVQQVIENHILK 160 (172)
T ss_dssp HHHHTTCCTTCCCTTSC--------CHHHHHHHH-------------------------------TCHHHHHHHHHHHHH
T ss_pred HHHHcCCCccccCCCCC--------CHHHHHHHh-------------------------------CcHHHHHHHHHHHHH
Confidence 665 4566555433322 666666654 455678888888888
Q ss_pred CCCCCC
Q 014068 269 NNIPSE 274 (431)
Q Consensus 269 ~n~~~~ 274 (431)
......
T Consensus 161 ~~~~~~ 166 (172)
T 3v30_A 161 LFQSNL 166 (172)
T ss_dssp HSCC--
T ss_pred HhcccC
Confidence 765443
No 70
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=7.9e-28 Score=237.33 Aligned_cols=239 Identities=12% Similarity=-0.073 Sum_probs=173.5
Q ss_pred eccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchh-------------------
Q 014068 4 CRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNT------------------- 64 (431)
Q Consensus 4 a~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l------------------- 64 (431)
......++|++|+++|++++..+. .|.|+++ |+.++|++|++++..... ..+
T Consensus 27 ~~~~~~dlv~~ll~~ga~i~~~~~-~g~~~~~-----g~~~~v~~Ll~~g~~~~~---~~~~~a~~~~~~~~~~~~~~~~ 97 (327)
T 1sw6_A 27 IITFTHDLTSDFLSSPLKIMKALP-SPVVNDN-----EQKMKLEAFLQRLLFPEI---QEMPTSLNNDSSNRNSEGGSSN 97 (327)
T ss_dssp EEECCTTCCCSTTTSSCCCEECBC-CCCCCCH-----HHHHHHHHHHHHHHC----------------------------
T ss_pred hhhhcCchHHHHhhCCcccccCCC-CCCcccC-----chhHHHHHHHHhccCCcc---ccchHhhhcccccccccccCCc
Confidence 344556789999999999999997 9999988 999999999988765332 112
Q ss_pred ----hHhhhcCChhhHHhhhhhhhhhhhhcc-cCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCC
Q 014068 65 ----QIEGDRGDGSSVKSKCDQSALSKFVNK-AADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAG 139 (431)
Q Consensus 65 ----~~a~~~~~~~~~~~~~~~~~~~~~in~-~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G 139 (431)
++++.......+..+. .....+|. +|..|.||||+|+..|+.++|++||++|++++.++.. |
T Consensus 98 ~~~~~~a~~~~~~~~~~~l~---~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~----------g 164 (327)
T 1sw6_A 98 QQQQHVSFDSLLQEVNDAFP---NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNM----------G 164 (327)
T ss_dssp ------CHHHHHHHHHHHCT---TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTT----------C
T ss_pred cchhHHHHHhhHHHHHHHHH---hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC----------C
Confidence 1122111112222221 12245788 8999999999999999999999999999999999976 9
Q ss_pred CcHHHHHHhcCC---HHHHHHHHHCC-CCCcccCCCCCcHHHHHHH----hCcHHHHHHhcC------------------
Q 014068 140 STPLHFAACGGN---LKCCQVLLSRG-ASRMSLNCNGWLPLDVARM----WGRHWLEPLLAP------------------ 193 (431)
Q Consensus 140 ~TpLh~Aa~~g~---~eivklLL~~G-Adin~~d~~G~TpLh~Aa~----~g~~~v~~LL~~------------------ 193 (431)
+||||+|+..|+ .++++.|++++ ++++.+|..|+||||+|+. .|+.+++++|..
T Consensus 165 ~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~ 244 (327)
T 1sw6_A 165 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT 244 (327)
T ss_dssp CCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-
T ss_pred CCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhh
Confidence 999999999998 78889999886 7899999999999999999 899999877754
Q ss_pred ---CCCCCCCCCCCCCCCchhhhhHHHHHHH------cCCccccccCCCCCchhhhhhccccchhccCCChHHHHHHHHH
Q 014068 194 ---SSDAVMPRFHPSNYLSLPLLSVLNVARE------CGLLSSTTSSSDDADTCAVCLERACTVAAEGCRHELCVRCALY 264 (431)
Q Consensus 194 ---~a~~~~~~~~~~~~~~~~l~t~l~~A~~------~G~~~~~~a~~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~ 264 (431)
+++++..... .. ++++.|.. .+ +. ..+ .--.+++..|+.. ||..++++|++
T Consensus 245 ~~~g~~~~~~~~~----g~----t~L~~a~~~~~Ll~~~---~n--~~d------~~G~TpLh~A~~~-g~~~~v~~Ll~ 304 (327)
T 1sw6_A 245 NEKESKPNDKNGE----RK----DSILENLDLKWIIANM---LN--AQD------SNGDTCLNIAARL-GNISIVDALLD 304 (327)
T ss_dssp -----------------------CHHHHHCSHHHHHHHT---TT--CCC------TTSCCHHHHHHHH-CCHHHHHHHHH
T ss_pred hcccCCccccccc----CC----ChhHHHHHHHHHHHhC---CC--CCC------CCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 4454443322 22 44444432 11 11 111 1124788889988 99999999999
Q ss_pred hhhcCCCCCCCCCCCCCCCC
Q 014068 265 LCSTNNIPSEMVGPPGSIPC 284 (431)
Q Consensus 265 ~ga~~n~~~~~~~~p~~~~C 284 (431)
.|++++..+..+.+|.++++
T Consensus 305 ~Gad~~~~d~~G~TpL~~A~ 324 (327)
T 1sw6_A 305 YGADPFIANKSGLRPVDFGA 324 (327)
T ss_dssp TTCCTTCCCTTSCCGGGGTC
T ss_pred cCCCCcccCCCCCCHHHHHH
Confidence 99999999988888877664
No 71
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=1.4e-25 Score=196.84 Aligned_cols=124 Identities=27% Similarity=0.216 Sum_probs=114.3
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 108 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 108 (431)
...||||+|+..|+.+++++|++++.. ++.+|..|.||||+|+. |+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~---------------------------------~~~~~~~g~t~L~~A~~-~~ 49 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN---------------------------------VNAQNGFGRTALQVMKL-GN 49 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC---------------------------------TTCCCTTSCCHHHHCCS-SC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC---------------------------------ccccCccCccHHHHHHc-Cc
Confidence 467999999999999999999987654 77888999999999999 99
Q ss_pred HHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHH
Q 014068 109 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 188 (431)
Q Consensus 109 ~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~ 188 (431)
.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 50 ~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 119 (162)
T 1ihb_A 50 PEIARRLLLRGANPDLKDRT----------GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVV 119 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999998876 99999999999999999999999999999999999999999999999998
Q ss_pred HHhcCCCC
Q 014068 189 PLLAPSSD 196 (431)
Q Consensus 189 ~LL~~~a~ 196 (431)
++|.+...
T Consensus 120 ~~Ll~~g~ 127 (162)
T 1ihb_A 120 EFLVKHTA 127 (162)
T ss_dssp HHHHHHSC
T ss_pred HHHHHccC
Confidence 77765433
No 72
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=3e-25 Score=197.14 Aligned_cols=148 Identities=30% Similarity=0.383 Sum_probs=130.3
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 108 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 108 (431)
.+.|+||+|+..|+.++|++|++++.. ++.+|..|.||||+|+..|+
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~---------------------------------~~~~~~~g~t~L~~A~~~~~ 59 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGAD---------------------------------VNAEDASGWTPLHLAAFNGH 59 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCC---------------------------------TTCCCTTSCCHHHHHHHTTC
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCC---------------------------------CCCCCCCCCCHHHHHHHcCC
Confidence 678999999999999999999988664 78889999999999999999
Q ss_pred HHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHH
Q 014068 109 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 188 (431)
Q Consensus 109 ~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~ 188 (431)
.++|++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 60 ~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 129 (169)
T 2y1l_E 60 LEIVEVLLKNGADVNAVDHA----------GMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIV 129 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCCCCccCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999866 99999999999999999999999999999999999999999999999997
Q ss_pred HHhc-CCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccc
Q 014068 189 PLLA-PSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSS 227 (431)
Q Consensus 189 ~LL~-~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~ 227 (431)
++|. .+++++..+..+. +++++|...|..++
T Consensus 130 ~~Ll~~g~~~~~~~~~g~--------t~l~~A~~~~~~~~ 161 (169)
T 2y1l_E 130 EVLLKNGADVNAQDKFGK--------TAFDISIDNGNEDL 161 (169)
T ss_dssp HHHHHTTCCTTCCCTTSC--------CHHHHHHHTTCHHH
T ss_pred HHHHHcCCCCCCcCCCCC--------CHHHHHHHhCCHHH
Confidence 6665 4566555443322 77888888766544
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.9e-25 Score=195.02 Aligned_cols=148 Identities=25% Similarity=0.218 Sum_probs=130.5
Q ss_pred CchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCH
Q 014068 30 GRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYF 109 (431)
Q Consensus 30 G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~ 109 (431)
|.||||+|+..|+.+++++|++. .. ..++..|..|.||||+ +..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~-------------------------------~~~~~~~~~g~t~L~~-~~~~~~ 48 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-EL-------------------------------VHPDALNRFGKTALQV-MMFGST 48 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TC-------------------------------CCTTCCCTTSCCHHHH-SCTTCH
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hC-------------------------------cCccccCCCCCcHHHH-HHcCCH
Confidence 67999999999999999999976 21 1277888999999999 999999
Q ss_pred HHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHH
Q 014068 110 DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEP 189 (431)
Q Consensus 110 e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~ 189 (431)
+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 49 ~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 118 (156)
T 1bd8_A 49 AIALELLKQGASPNVQDTS----------GTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS 118 (156)
T ss_dssp HHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCC----------CCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHH
Confidence 9999999999999999876 999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCcccc
Q 014068 190 LLAPSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSST 228 (431)
Q Consensus 190 LL~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~ 228 (431)
+|...++++..+..+. +++++|...|..+++
T Consensus 119 ~Ll~~~~~~~~~~~g~--------t~l~~A~~~~~~~~v 149 (156)
T 1bd8_A 119 FLAAESDLHRRDARGL--------TPLELALQRGAQDLV 149 (156)
T ss_dssp HHHTTSCTTCCCTTSC--------CHHHHHHHSCCHHHH
T ss_pred HHHhccCCCCcCCCCC--------CHHHHHHHcCcHHHH
Confidence 8887766655544333 788999888766554
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=1.3e-28 Score=231.26 Aligned_cols=146 Identities=25% Similarity=0.299 Sum_probs=120.2
Q ss_pred HHHHHHcCCCCcccC--CCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhh
Q 014068 12 VQTLLLFRCNVTRAD--YLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFV 89 (431)
Q Consensus 12 Vk~LL~~gadi~~~d--~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~i 89 (431)
|+.||++|++++..+ ...|.||||+|+..|+.++|++|++.+.. +
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---------------------------------~ 47 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND---------------------------------P 47 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC---------------------------------T
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC---------------------------------C
Confidence 578899998876543 23678999999999999999999987654 7
Q ss_pred cccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccC
Q 014068 90 NKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLN 169 (431)
Q Consensus 90 n~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d 169 (431)
+.+|..|.||||+|+..|+.++|++|+++|++++..|.. |+||||+|+..|+.+++++|+++|++++.++
T Consensus 48 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~----------g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~ 117 (229)
T 2vge_A 48 SQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSH----------GWTPLHCAASCNDTVICMALVQHGAAIFATT 117 (229)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 888999999999999999999999999999999999876 9999999999999999999999999999986
Q ss_pred -CCCCcHHHHH--HHhCcHHHHHHhcC-CCCCCCC
Q 014068 170 -CNGWLPLDVA--RMWGRHWLEPLLAP-SSDAVMP 200 (431)
Q Consensus 170 -~~G~TpLh~A--a~~g~~~v~~LL~~-~a~~~~~ 200 (431)
..|+||||+| +..|+.+++++|.. +++++..
T Consensus 118 ~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~ 152 (229)
T 2vge_A 118 LSDGATAFEKCDPYREGYADCATYLADVEQSMGLM 152 (229)
T ss_dssp SSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTS
T ss_pred CCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccc
Confidence 6999999999 99999999766654 5665554
No 75
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=7.6e-27 Score=204.98 Aligned_cols=134 Identities=23% Similarity=0.178 Sum_probs=112.9
Q ss_pred cCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHH
Q 014068 25 ADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAA 104 (431)
Q Consensus 25 ~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa 104 (431)
.+. .|.||||+|+..|+.++|++|++++.. ++.+|..|.||||+|+
T Consensus 8 ~~~-~~~t~L~~A~~~g~~~~v~~Ll~~g~~---------------------------------~~~~~~~g~t~L~~A~ 53 (156)
T 1bi7_B 8 SME-PSADWLATAAARGRVEEVRALLEAGAN---------------------------------PNAPNSYGRRPIQVMM 53 (156)
T ss_dssp --C-CSTTHHHHHHHHTCHHHHHHHHTTTCC---------------------------------TTCCCSSSCCTTTSSC
T ss_pred CCc-cchHHHHHHHHcCCHHHHHHHHHcCCC---------------------------------CCCCCCCCCCHHHHHH
Confidence 444 899999999999999999999987654 7888889999999985
Q ss_pred HcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCc-HHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhC
Q 014068 105 LNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGST-PLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWG 183 (431)
Q Consensus 105 ~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~T-pLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g 183 (431)
.|+.++|++|+++|++++..+.. |.| |||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 54 -~~~~~~v~~Ll~~g~~~~~~d~~----------g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 122 (156)
T 1bi7_B 54 -MGSARVAELLLLHGAEPNCADPA----------TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG 122 (156)
T ss_dssp -TTCHHHHHHHHTTTCCCCCCCTT----------TCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHT
T ss_pred -cCCHHHHHHHHHcCCCCCCcCCC----------CCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhC
Confidence 99999999999999999999876 888 999999999999999999999999999999999999999999
Q ss_pred cHHHHHHhcC-CCCCCCCCCC
Q 014068 184 RHWLEPLLAP-SSDAVMPRFH 203 (431)
Q Consensus 184 ~~~v~~LL~~-~a~~~~~~~~ 203 (431)
+.+++++|.+ +++++.....
T Consensus 123 ~~~~v~~Ll~~ga~~~~~~~~ 143 (156)
T 1bi7_B 123 HRDVARYLRAAAGGTRGSNHA 143 (156)
T ss_dssp CHHHHHHHSSCC---------
T ss_pred HHHHHHHHHHcCCCCCccCcC
Confidence 9999876654 5666555433
No 76
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.5e-25 Score=192.08 Aligned_cols=122 Identities=32% Similarity=0.361 Sum_probs=116.0
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 108 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 108 (431)
.|.||||+|+..|+.+++++|++++.. ++.+|..|.||||+|+..|+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~---------------------------------~~~~~~~g~t~L~~A~~~~~ 59 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGAD---------------------------------VNAKDEYGLTPLYLATAHGH 59 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCC---------------------------------TTCCCTTSCCHHHHHHHHTC
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCC---------------------------------CCCcCCCCCCHHHHHHHcCC
Confidence 689999999999999999999987654 78889999999999999999
Q ss_pred HHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHH
Q 014068 109 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 188 (431)
Q Consensus 109 ~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~ 188 (431)
.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 60 ~~~v~~Ll~~g~~~~~~d~~----------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~ 129 (136)
T 2jab_A 60 LEIVEVLLKNGADVNAVDAI----------GFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLA 129 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTT----------CCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCCCCcCCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHH
Confidence 99999999999999999876 99999999999999999999999999999999999999999999999999
Q ss_pred HHhcC
Q 014068 189 PLLAP 193 (431)
Q Consensus 189 ~LL~~ 193 (431)
++|.+
T Consensus 130 ~~Ll~ 134 (136)
T 2jab_A 130 EILQK 134 (136)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88865
No 77
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=3.9e-25 Score=193.03 Aligned_cols=147 Identities=24% Similarity=0.232 Sum_probs=128.5
Q ss_pred CchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCH
Q 014068 30 GRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYF 109 (431)
Q Consensus 30 G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~ 109 (431)
+.|+||+|+..|+.+++++|++++.+ ++ .+..|.||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~---------------------------------~~-~~~~g~t~L~~A~~~~~~ 47 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP---------------------------------FT-TDWLGTSPLHLAAQYGHF 47 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC---------------------------------CC-CCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC---------------------------------CC-cCCCCCCHHHHHHHcCCH
Confidence 46999999999999999999987653 33 467899999999999999
Q ss_pred HHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHH
Q 014068 110 DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLEP 189 (431)
Q Consensus 110 e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~ 189 (431)
+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 48 ~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 117 (153)
T 1awc_B 48 STTEVLLRAGVSRDARTKV----------DRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVE 117 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTT----------CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCC----------CCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999998876 999999999999999999999999999999999999999999999999976
Q ss_pred Hhc-CCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCcccc
Q 014068 190 LLA-PSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSST 228 (431)
Q Consensus 190 LL~-~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~ 228 (431)
+|. .+++++..+..+. +++++|...|..+++
T Consensus 118 ~Ll~~ga~~~~~~~~g~--------t~l~~A~~~~~~~i~ 149 (153)
T 1awc_B 118 LLIKYGADVHTQSKFCK--------TAFDISIDNGNEDLA 149 (153)
T ss_dssp HHHHTTCCTTCCCTTSC--------CHHHHHHHTTCHHHH
T ss_pred HHHHcCCCccccCCCCC--------CHHHHHHHcCCHHHH
Confidence 665 5666655544333 889999998876654
No 78
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=1.1e-24 Score=197.82 Aligned_cols=179 Identities=17% Similarity=0.093 Sum_probs=153.3
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCC----CCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHH
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFV----PSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAA 104 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~----~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa 104 (431)
.+.||||+|+..|+.++++.|+.++. ..+..+.++++.|+..+..+.++.++..+ ..++.++..|.||||+|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG---ADINLQNSISDSPYLYAG 80 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCHHHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCCHHHHHH
Confidence 68999999999999999999998654 44567889999999999999999888764 357888999999999999
Q ss_pred HcCCHHHHHHHH-HCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCC-CCCcccCCCCCcHHHHHHHh
Q 014068 105 LNGYFDCVQLLL-DLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRG-ASRMSLNCNGWLPLDVARMW 182 (431)
Q Consensus 105 ~~g~~e~VklLL-~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~G-Adin~~d~~G~TpLh~Aa~~ 182 (431)
..|+.+++++|+ ..+++++..+.. |.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 150 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRY----------GGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGL 150 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTT----------SCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHS
T ss_pred HcCCHHHHHHHHhccCcccccccCC----------CCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHh
Confidence 999999999999 677899988866 999999999999999999999999 99999999999999999998
Q ss_pred Cc-----HHHHHHh-cCCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCcccc
Q 014068 183 GR-----HWLEPLL-APSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSST 228 (431)
Q Consensus 183 g~-----~~v~~LL-~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~ 228 (431)
++ .+++++| ..+++++..+..+. |++++|...|..+++
T Consensus 151 ~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~--------t~l~~A~~~~~~~~~ 194 (201)
T 3hra_A 151 REGNQLYQDIVKLLMENGADQSIKDNSGR--------TAMDYANQKGYTEIS 194 (201)
T ss_dssp SCCSHHHHHHHHHHHHTTCCTTCCCTTSC--------CHHHHHHHHTCHHHH
T ss_pred ccchhhHHHHHHHHHHCCCCCCccCCCCC--------CHHHHHHHcCCHhHH
Confidence 87 7886655 55677666544433 788888887766543
No 79
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.92 E-value=2.1e-24 Score=193.34 Aligned_cols=164 Identities=23% Similarity=0.229 Sum_probs=136.3
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 108 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 108 (431)
.+.++||+|+..|+.+++++|++++.. .++.+|..|.||||+|+..|+
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~--------------------------------~~~~~~~~g~t~L~~A~~~~~ 51 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTEN--------------------------------DLNQGDDHGFSPLHWACREGR 51 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTS--------------------------------CTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcc--------------------------------cccccCCCCCCHHHHHHHcCc
Confidence 678999999999999999999976321 278889999999999999999
Q ss_pred HHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHH
Q 014068 109 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 188 (431)
Q Consensus 109 ~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~ 188 (431)
.++|++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 52 ~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v 121 (179)
T 3f6q_A 52 SAVVEMLIMRGARINVMNRG----------DDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVA 121 (179)
T ss_dssp HHHHHHHHHTTCCTTCCCTT----------CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999876 99999999999999999999999999999999999999999999999997
Q ss_pred HHhc-CCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccccccCCCCCchhhhhhccccchhccCCChHHHHHHHHHhhh
Q 014068 189 PLLA-PSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTTSSSDDADTCAVCLERACTVAAEGCRHELCVRCALYLCS 267 (431)
Q Consensus 189 ~LL~-~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~a~~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga 267 (431)
++|. .+++++..+..+ .++...|+.. ++..+++.|++.|+
T Consensus 122 ~~Ll~~ga~~~~~~~~g--------------------------------------~tpl~~A~~~-~~~~~~~~L~~~g~ 162 (179)
T 3f6q_A 122 EDLVANGALVSICNKYG--------------------------------------EMPVDKAKAP-LRELLRERAEKMGQ 162 (179)
T ss_dssp HHHHHTTCCSSBCCTTS--------------------------------------CCGGGGSCHH-HHHHHHHHHHHTTC
T ss_pred HHHHHCCCCcchhccCC--------------------------------------CCcHHHHHHH-HHHHHHHHHHHhhc
Confidence 6665 455544432211 1334444444 77789999999999
Q ss_pred cCCCCC
Q 014068 268 TNNIPS 273 (431)
Q Consensus 268 ~~n~~~ 273 (431)
+.+..+
T Consensus 163 ~~~~~~ 168 (179)
T 3f6q_A 163 NLNRIP 168 (179)
T ss_dssp CCSCBC
T ss_pred CcccCC
Confidence 987544
No 80
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=8.8e-25 Score=182.77 Aligned_cols=122 Identities=40% Similarity=0.564 Sum_probs=114.7
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 108 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 108 (431)
+|+||||+|+..|+.+++++|++++.. ++..+..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~---------------------------------~~~~~~~g~t~L~~A~~~~~ 47 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD---------------------------------VNAKDKNGRTPLHLAARNGH 47 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC---------------------------------TTCCCTTSCCHHHHHHHHTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC---------------------------------CCCcCCCCCcHHHHHHHcCc
Confidence 589999999999999999999987654 67788899999999999999
Q ss_pred HHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHH
Q 014068 109 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 188 (431)
Q Consensus 109 ~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~ 188 (431)
.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 48 ~~~~~~Ll~~g~~~~~~~~~----------g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 117 (126)
T 1n0r_A 48 LEVVKLLLEAGADVNAKDKN----------GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV 117 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCCCcccCCC----------CCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHH
Confidence 99999999999999998866 99999999999999999999999999999999999999999999999998
Q ss_pred HHhcC
Q 014068 189 PLLAP 193 (431)
Q Consensus 189 ~LL~~ 193 (431)
++|.+
T Consensus 118 ~~Ll~ 122 (126)
T 1n0r_A 118 KLLLE 122 (126)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=3.1e-25 Score=194.63 Aligned_cols=135 Identities=21% Similarity=0.211 Sum_probs=111.2
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+ .|+.+++++|++.++.
T Consensus 17 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~-~~~~~~v~~Ll~~g~~------------------------- 69 (156)
T 1bi7_B 17 ATAAARGRVEEVRALLEAGANPNAPNS-YGRRPIQVMM-MGSARVAELLLLHGAE------------------------- 69 (156)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCS-SSCCTTTSSC-TTCHHHHHHHHTTTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH-cCCHHHHHHHHHcCCC-------------------------
Confidence 679999999999999999999999997 9999999996 9999999999987664
Q ss_pred hhhhhhhhhcccCCCCch-HHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGIT-ALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLL 159 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~T-pLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL 159 (431)
++.+|..|.| |||+|+..|+.++|++|+++|++++.++.. |.||||+|+..|+.+++++|+
T Consensus 70 --------~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~----------g~tpl~~A~~~~~~~~v~~Ll 131 (156)
T 1bi7_B 70 --------PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAW----------GRLPVDLAEELGHRDVARYLR 131 (156)
T ss_dssp --------CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTT----------CCCHHHHHHHHTCHHHHHHHS
T ss_pred --------CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCC----------CCCHHHHHHHhCHHHHHHHHH
Confidence 7888999999 999999999999999999999999999976 999999999999999999999
Q ss_pred HCCCCCcccCCCCCcHHHHHH
Q 014068 160 SRGASRMSLNCNGWLPLDVAR 180 (431)
Q Consensus 160 ~~GAdin~~d~~G~TpLh~Aa 180 (431)
++|++++.+|..|.||.+-+.
T Consensus 132 ~~ga~~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 132 AAAGGTRGSNHARIDAAEGPS 152 (156)
T ss_dssp SCC------------------
T ss_pred HcCCCCCccCcCcCcccccCC
Confidence 999999999999999987543
No 82
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=6.9e-26 Score=204.29 Aligned_cols=139 Identities=22% Similarity=0.171 Sum_probs=122.5
Q ss_pred EeeccCCHHHHHHHHHcCCCCcc-----------cCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhc
Q 014068 2 QACRYGHWEVVQTLLLFRCNVTR-----------ADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDR 70 (431)
Q Consensus 2 ~Aa~~G~~evVk~LL~~gadi~~-----------~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~ 70 (431)
.|++.|..+++++|++.+..... .+. .|.||||+|+..|+.+++++|++ +..
T Consensus 6 ~aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~-~~~--------------- 68 (183)
T 3deo_A 6 IGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVS-EYETPWWTAARKADEQALSQLLE-DRD--------------- 68 (183)
T ss_dssp EEEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHH-HHHHHHHHHHHTTCHHHHHHHTT-TSC---------------
T ss_pred HHHHhcCCchhHHHHHHhCCCCccccchhcccccCCC-CCCCHHHHHHHcCCHHHHHHHHh-cCC---------------
Confidence 68888899999999876433221 233 78999999999999999999997 433
Q ss_pred CChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCccc-ccCCCccccCCCCCcHHHHHHhc
Q 014068 71 GDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVT-FHYGTSMDLIGAGSTPLHFAACG 149 (431)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d-~~~~~~~~~~~~G~TpLh~Aa~~ 149 (431)
++.+|..|.||||+|+..|+.++|++|+++|++++..+ .. |+||||+|+..
T Consensus 69 ------------------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~----------g~tpL~~A~~~ 120 (183)
T 3deo_A 69 ------------------VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG----------GLTALHMAAGY 120 (183)
T ss_dssp ------------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSS----------SCCHHHHHHHT
T ss_pred ------------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC----------CCCHHHHHHhc
Confidence 78889999999999999999999999999999999888 44 99999999999
Q ss_pred CCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcH
Q 014068 150 GNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRH 185 (431)
Q Consensus 150 g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~ 185 (431)
|+.+++++|+++|++++.+|..|+||||+|+..++.
T Consensus 121 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 121 VRPEVVEALVELGADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred CcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC
Confidence 999999999999999999999999999999986543
No 83
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.92 E-value=3.6e-24 Score=188.90 Aligned_cols=130 Identities=25% Similarity=0.226 Sum_probs=115.9
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 108 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 108 (431)
.|.||||+|+..|+.+++++|++.+.. .++..+..|.||||+|+..|+
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~--------------------------------~~~~~~~~g~t~L~~A~~~~~ 54 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSV--------------------------------NCRDIEGRQSTPLHFAAGYNR 54 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTT--------------------------------TCCCTTTTCCCHHHHHHHTTC
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCC--------------------------------CccccccCCCCHHHHHHHcCh
Confidence 789999999999999999999964221 256677889999999999999
Q ss_pred HHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHH
Q 014068 109 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 188 (431)
Q Consensus 109 ~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~ 188 (431)
.++|++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 55 ~~~v~~Ll~~g~~~~~~~~~----------g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 124 (165)
T 3twr_A 55 VSVVEYLLQHGADVHAKDKG----------GLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEIC 124 (165)
T ss_dssp HHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhcCCCCCccCCC----------CCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999976 99999999999999999999999999999999999999999999999997
Q ss_pred HHhcC-CCCCCCC
Q 014068 189 PLLAP-SSDAVMP 200 (431)
Q Consensus 189 ~LL~~-~a~~~~~ 200 (431)
++|.+ +++++..
T Consensus 125 ~~Ll~~ga~~~~~ 137 (165)
T 3twr_A 125 KLLLQHGADPTKK 137 (165)
T ss_dssp HHHHHTTCCTTCC
T ss_pred HHHHHcCCCCccc
Confidence 76654 4554443
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.2e-24 Score=186.58 Aligned_cols=118 Identities=27% Similarity=0.383 Sum_probs=111.4
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+||..|+.++|++|+++|++++..|. .|+||||+|+..|+.+++++|++++..
T Consensus 19 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------- 72 (136)
T 2jab_A 19 LEAARAGQDDEVRILMANGADVNAKDE-YGLTPLYLATAHGHLEIVEVLLKNGAD------------------------- 72 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCC-------------------------
T ss_pred HHHHHhCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-------------------------
Confidence 679999999999999999999999997 999999999999999999999987664
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 160 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~ 160 (431)
++.+|..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 73 --------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~----------g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 73 --------VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKF----------GKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp --------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCC----------CCCHHHHHHHCCCHHHHHHHHH
Confidence 7888999999999999999999999999999999999876 9999999999999999999999
Q ss_pred CC
Q 014068 161 RG 162 (431)
Q Consensus 161 ~G 162 (431)
+|
T Consensus 135 ~G 136 (136)
T 2jab_A 135 LN 136 (136)
T ss_dssp C-
T ss_pred cC
Confidence 86
No 85
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=7.4e-25 Score=205.49 Aligned_cols=178 Identities=20% Similarity=0.101 Sum_probs=149.4
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|+++|++++..|. .|+||||+|+..|+.+++++|++.++.
T Consensus 26 ~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~ga~------------------------- 79 (229)
T 2vge_A 26 LDAALTGELEVVQQAVKEMNDPSQPNE-EGITALHNAICGANYSIVDFLITAGAN------------------------- 79 (229)
T ss_dssp HHHHHHTCHHHHHHHHHHSSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCC-------------------------
Confidence 578999999999999999999999997 999999999999999999999988665
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHH--HhcCCHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFA--ACGGNLKCCQVL 158 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~A--a~~g~~eivklL 158 (431)
++.+|..|.||||+|+..|+.++|++|+++|++++..+.. .|.||||+| +..|+.+++++|
T Consensus 80 --------~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~---------~g~tpL~~A~a~~~~~~~~v~~L 142 (229)
T 2vge_A 80 --------VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLS---------DGATAFEKCDPYREGYADCATYL 142 (229)
T ss_dssp --------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSS---------TTCCTGGGCCTTSTTHHHHHHHH
T ss_pred --------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCC---------CCCCHHHHHHHHhcChHHHHHHH
Confidence 7889999999999999999999999999999999998742 399999999 999999999999
Q ss_pred HHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccccc
Q 014068 159 LSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSSTT 229 (431)
Q Consensus 159 L~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~~ 229 (431)
+++|++++.+|..|.|||+.++..... ..+|..++++++...... +.|+|++|...|..+++.
T Consensus 143 l~~ga~~~~~~~~~~~~l~~~~~~~~~--~~ll~~ga~~~~~~~d~~------G~TpL~~A~~~g~~~~v~ 205 (229)
T 2vge_A 143 ADVEQSMGLMNSGAVYALWDYSAEFGD--ELSFREGESVTVLRRDGP------EETDWWWAALHGQEGYVP 205 (229)
T ss_dssp HHHHHHTTTSGGGEEEESSCBCCSSTT--BCCBCTTCEEEEEESSCT------TCSSEEEEEETTEEEEEE
T ss_pred HHcCCCcccccCCchHHHHHHhhcccc--ccCccccccccccccCCC------cccHHHHHHHcCCcceee
Confidence 999999999999999999976555433 234455555333322211 226677777777777665
No 86
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=2.5e-25 Score=190.71 Aligned_cols=119 Identities=20% Similarity=0.244 Sum_probs=113.0
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+. |+.+++++|++++..
T Consensus 17 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~-~~~~~v~~Ll~~g~~------------------------- 69 (136)
T 1d9s_A 17 ATAAARGQVETVRQLLEAGADPNALNR-FGRRPIQVMMM-GSAQVAELLLLHGAE------------------------- 69 (136)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCTTTTTSTT-SCHHHHHHHHHHTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCcCCcCC-CCCCHHHHHHc-CCHHHHHHHHHCCCC-------------------------
Confidence 579999999999999999999999997 99999999999 999999999987664
Q ss_pred hhhhhhhhhcccCCC-CchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 014068 81 DQSALSKFVNKAADG-GITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLL 159 (431)
Q Consensus 81 ~~~~~~~~in~~d~~-G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL 159 (431)
++.+|.. |.||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..|+.+++++|+
T Consensus 70 --------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~----------g~tpl~~A~~~~~~~~~~~Ll 131 (136)
T 1d9s_A 70 --------PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAW----------GRLPVDLAEEQGHRDIARYLH 131 (136)
T ss_dssp --------SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSS----------SSCHHHHHHHHTCHHHHHHHH
T ss_pred --------CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC----------CCCHHHHHHHcCCHHHHHHHH
Confidence 7888888 999999999999999999999999999999976 999999999999999999999
Q ss_pred HCCCC
Q 014068 160 SRGAS 164 (431)
Q Consensus 160 ~~GAd 164 (431)
++|||
T Consensus 132 ~~Gad 136 (136)
T 1d9s_A 132 AATGD 136 (136)
T ss_dssp HHHCC
T ss_pred HcCCC
Confidence 99986
No 87
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=8.5e-24 Score=177.83 Aligned_cols=117 Identities=28% Similarity=0.400 Sum_probs=106.6
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 108 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 108 (431)
.|.||||+|+..|+.+++++|++.+.. ++.+|..|.||||+|+..|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~---------------------------------~~~~~~~g~t~L~~A~~~~~ 52 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGED---------------------------------VNRTLEGGRKPLHYAADCGQ 52 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCC---------------------------------TTSCCTTSSCHHHHHHHTTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCC---------------------------------cCccCCCCCcHHHHHHHcCC
Confidence 689999999999999999999987654 78889999999999999999
Q ss_pred HHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHHH
Q 014068 109 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWLE 188 (431)
Q Consensus 109 ~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~ 188 (431)
.++|++|+++|++++..|.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|. +.++.
T Consensus 53 ~~~v~~Ll~~g~~~~~~d~~----------g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~---~~~~~ 119 (123)
T 3aaa_C 53 LEILEFLLLKGADINAPDKH----------HITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD---NQAIK 119 (123)
T ss_dssp HHHHHHHHTTTCCTTCCCTT----------SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC---CHHHH
T ss_pred HHHHHHHHHcCCCCCcCCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC---CHHHH
Confidence 99999999999999999976 999999999999999999999999999999999999999994 44444
Q ss_pred HHh
Q 014068 189 PLL 191 (431)
Q Consensus 189 ~LL 191 (431)
++|
T Consensus 120 ~ll 122 (123)
T 3aaa_C 120 ALL 122 (123)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=4.8e-24 Score=178.27 Aligned_cols=120 Identities=43% Similarity=0.614 Sum_probs=113.5
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++.+..
T Consensus 7 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------- 60 (126)
T 1n0r_A 7 HLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLEAGAD------------------------- 60 (126)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCC-------------------------
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcCcHHHHHHHHHcCCC-------------------------
Confidence 578999999999999999999999987 999999999999999999999987654
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 160 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~ 160 (431)
++.+|..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 61 --------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~----------g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 61 --------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN----------GRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp --------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------CcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCC----------CCCHHHHHHHcCcHHHHHHHHH
Confidence 7788889999999999999999999999999999998866 9999999999999999999999
Q ss_pred CCCC
Q 014068 161 RGAS 164 (431)
Q Consensus 161 ~GAd 164 (431)
+|||
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 9986
No 89
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=8.2e-25 Score=213.81 Aligned_cols=147 Identities=21% Similarity=0.139 Sum_probs=110.8
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHc--
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALN-- 106 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~-- 106 (431)
.+.++||.|+..|+.+.++.|++.+.+.+.... ....+..|.||||+|+..
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~---------------------------~~~~~~~g~t~Lh~A~~~~~ 202 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLP---------------------------GPDAQAPEELVLHLAVKVAN 202 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEE---------------------------CSSSCSCEECHHHHHHHTCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCC---------------------------CcccCCCCccHHHHHHHhcc
Confidence 567899999999999999999987765443210 012466789999999987
Q ss_pred -CCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcH
Q 014068 107 -GYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRH 185 (431)
Q Consensus 107 -g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~ 185 (431)
|+.++|++||++|++++..|.. |+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.
T Consensus 203 ~~~~~iv~~Ll~~gadvn~~d~~----------G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~ 272 (301)
T 2b0o_E 203 QASLPLVDFIIQNGGHLDAKAAD----------GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHK 272 (301)
T ss_dssp TTTHHHHHHHHHHSSCTTCCCTT----------CCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCH
T ss_pred cCcHHHHHHHHhcCCCCCCCCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 8899999999999999988866 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCc
Q 014068 186 WLEPLLAPSSDAVMPRFHPSNYLSLPLLSVLNVARECGLL 225 (431)
Q Consensus 186 ~v~~LL~~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~ 225 (431)
+++++|...... . +.|++++|.++|+.
T Consensus 273 ~iv~~Ll~~ga~-----~--------g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 273 ECEELLEQAQAG-----T--------FAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHHHHHH-----T--------TSSCCC--------
T ss_pred HHHHHHHHhcCC-----C--------CCChhHHHHhcCCc
Confidence 988777654332 1 12567788887764
No 90
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=5.1e-24 Score=205.03 Aligned_cols=179 Identities=20% Similarity=0.165 Sum_probs=154.1
Q ss_pred CchHHHHHHHhCCHHHHHHHHhc-----CCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHH
Q 014068 30 GRTALHFAAVNGHVRCIRLVVAD-----FVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAA 104 (431)
Q Consensus 30 G~TpLh~Aa~~G~~eiv~~LL~~-----~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa 104 (431)
+++++|.|+..|+.+.++.|+.. ....+..+.+++++|+..++...++.++..+.. .++..+..|.||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVC--KVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCC--CTTCCCTTSCCHHHHGG
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC--cCCCCCCCCCCHHHHHH
Confidence 56788999999999999998754 445678899999999999999999988876542 47889999999999999
Q ss_pred -----HcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHH
Q 014068 105 -----LNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVA 179 (431)
Q Consensus 105 -----~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~A 179 (431)
..++.+++++|++.|++++..+.. |.||||+|+..|+.++|++|+++|+++|.+|..|+||||+|
T Consensus 154 ~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~----------g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A 223 (276)
T 4hbd_A 154 LATLKTQDDIETVLQLFRLGNINAKASQA----------GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCA 223 (276)
T ss_dssp GCCCCSHHHHHHHHHHHHHSCTTCCCTTT----------CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHhhhhhhHHHHHHHHHcCCCccccCCC----------CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Confidence 668899999999999998888765 99999999999999999999999999999999999999999
Q ss_pred HHhCcHHHHHHhcC--CCCCCCCCCCCCCCCchhhhhHHHHHHHcCCcccc
Q 014068 180 RMWGRHWLEPLLAP--SSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSST 228 (431)
Q Consensus 180 a~~g~~~v~~LL~~--~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~~ 228 (431)
+..|+.+++++|+. +++++..+..+. |++++|...|..+++
T Consensus 224 ~~~g~~~iv~~Ll~~~gad~~~~d~~g~--------TpL~~A~~~g~~~iv 266 (276)
T 4hbd_A 224 CEHGHKEIAGLLLAVPSCDISLTDRDGS--------TALMVALDAGQSEIA 266 (276)
T ss_dssp HHHTCHHHHHHHHTSTTCCTTCCCTTSC--------CHHHHHHHHTCHHHH
T ss_pred HHCCCHHHHHHHHhcCCCCCcCcCCCCC--------CHHHHHHHcCCHHHH
Confidence 99999999887765 666666554433 788888888766554
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=1.5e-24 Score=205.00 Aligned_cols=109 Identities=26% Similarity=0.233 Sum_probs=101.5
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 108 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 108 (431)
.|.||||+|+..|+.+++++|++ +.. +|.+|..|.||||+|+..|+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~---------------------------------~~~~d~~g~t~L~~A~~~g~ 89 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRD---------------------------------VDAVDENGRTALLFVAGLGS 89 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCC---------------------------------TTCBCTTSCBHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCC---------------------------------CCCcCCCCCCHHHHHHHCCC
Confidence 68999999999999999999997 443 78889999999999999999
Q ss_pred HHHHHHHHHCCCCCCccc-ccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHH
Q 014068 109 FDCVQLLLDLHANVSAVT-FHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARM 181 (431)
Q Consensus 109 ~e~VklLL~~Gadvn~~d-~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~ 181 (431)
.++|++|+++|++++..+ .. |.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.
T Consensus 90 ~~~v~~Ll~~ga~~~~~~~~~----------g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 90 DKCVRLLAEAGADLDHRDMRG----------GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHHHHHHTTCCTTCCCSSS----------CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcCCCCC----------CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 999999999999999888 44 9999999999999999999999999999999999999999985
No 92
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=6.6e-25 Score=206.43 Aligned_cols=141 Identities=23% Similarity=0.250 Sum_probs=128.4
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|+++|++++..|. .|+||||+|+..|+.+++++|+++++.
T Consensus 42 ~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------------------- 95 (239)
T 1ycs_B 42 LDSSLEGEFDLVQRIIYEVDDPSLPND-EGITALHNAVCAGHTEIVKFLVQFGVN------------------------- 95 (239)
T ss_dssp HHHHHHTCHHHHHHHTSTTSSCCCCCT-TSCCHHHHHHHHTCHHHHHHHHHHTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-------------------------
Confidence 578999999999999999999999997 999999999999999999999987665
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHH--HhcCCHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFA--ACGGNLKCCQVL 158 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~A--a~~g~~eivklL 158 (431)
++.+|..|.||||+|+..|+.++|++|+++|++++..+.. .+.||||+| +..|+.+++++|
T Consensus 96 --------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~---------~~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 96 --------VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYS---------DMQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp --------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSS---------SCCCHHHHCCSSSTTCCCHHHHH
T ss_pred --------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCC---------CCcchHHHHHHhhhccHHHHHHH
Confidence 8889999999999999999999999999999999999876 244999999 889999999999
Q ss_pred HHCCCCCccc---------CCCCCcHHHHHHHhCc
Q 014068 159 LSRGASRMSL---------NCNGWLPLDVARMWGR 184 (431)
Q Consensus 159 L~~GAdin~~---------d~~G~TpLh~Aa~~g~ 184 (431)
+++|++++.. +..+.+++++|...|.
T Consensus 159 l~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 159 YGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 9999998876 5668888888877775
No 93
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=1.5e-23 Score=194.32 Aligned_cols=125 Identities=29% Similarity=0.255 Sum_probs=112.5
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 108 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 108 (431)
.|.||||+|+..|+.++|++|++.+.. ++.+|..|.||||+|+..|+
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------------------------------~~~~~~~g~t~L~~A~~~~~ 118 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVG---------------------------------VNGLDKAGSTALYWACHGGH 118 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCC---------------------------------TTCCCTTSCCHHHHHHHTTC
T ss_pred ccccccccccccCcHHHHHHHHhCCCC---------------------------------ccccCCCCCCHHHHHHHcCC
Confidence 678999999999999999999987654 78889999999999999999
Q ss_pred HHHHHHHHHC-CCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHHH
Q 014068 109 FDCVQLLLDL-HANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHWL 187 (431)
Q Consensus 109 ~e~VklLL~~-Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v 187 (431)
.++|++|+++ |++++..+.. |.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..++.++
T Consensus 119 ~~~v~~Ll~~~g~~~~~~d~~----------g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 188 (222)
T 3ehr_A 119 KDIVEMLFTQPNIELNQQNKL----------GDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASL 188 (222)
T ss_dssp HHHHHHHTTSTTCCCCCCCTT----------SCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHH
T ss_pred HHHHHHHHcCCCCCccccCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHH
Confidence 9999999999 9999999976 9999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCC
Q 014068 188 EPLLAPSSD 196 (431)
Q Consensus 188 ~~LL~~~a~ 196 (431)
+++|.....
T Consensus 189 l~~l~~~~~ 197 (222)
T 3ehr_A 189 LKKKQGTDA 197 (222)
T ss_dssp HC-------
T ss_pred HHHHhccch
Confidence 876665443
No 94
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=3.9e-23 Score=215.34 Aligned_cols=122 Identities=24% Similarity=0.250 Sum_probs=62.9
Q ss_pred EeeccCCHHHHHHHHHcCCCCccc------CCCCCchHHHHHHH---hCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCC
Q 014068 2 QACRYGHWEVVQTLLLFRCNVTRA------DYLSGRTALHFAAV---NGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGD 72 (431)
Q Consensus 2 ~Aa~~G~~evVk~LL~~gadi~~~------d~~~G~TpLh~Aa~---~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~ 72 (431)
.|+..|+.++|+.||++|++++.. +. .|+||||+|+. .|+.++|++|+++|++
T Consensus 138 ~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~-~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~----------------- 199 (497)
T 3lvq_E 138 TAICNRDLLSVLEAFANGQDFGQPLPGPDAQA-PEELVLHLAVKVANQASLPLVDFIIQNGGH----------------- 199 (497)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCC-SCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-----------------
T ss_pred HHHhccCHHHHHHHHhhcccccCCCCCccccc-ccchHHHHHHHhcccccHHHHHHHHHcCCC-----------------
Confidence 345555555555555555555544 33 45555555543 5555555555554443
Q ss_pred hhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCH
Q 014068 73 GSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNL 152 (431)
Q Consensus 73 ~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~ 152 (431)
+|.+|..|.||||+|+..|+.++|++||++|++++.+|.. |.||||+|+..|+.
T Consensus 200 ----------------vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~----------g~tpl~~A~~~~~~ 253 (497)
T 3lvq_E 200 ----------------LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEA----------GETALDIARKKHHK 253 (497)
T ss_dssp ----------------TTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTT----------CCCHHHHHHHTTCH
T ss_pred ----------------CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC----------CCCHHHHHHHcCCH
Confidence 4555555555555555555555555555555555555543 55555555555555
Q ss_pred HHHHHHHHCCCCCcc
Q 014068 153 KCCQVLLSRGASRMS 167 (431)
Q Consensus 153 eivklLL~~GAdin~ 167 (431)
+++++|+++|++++.
T Consensus 254 ~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 254 ECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHHHHHHTCC----
T ss_pred HHHHHHHHhCCCCCC
Confidence 555555555555544
No 95
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=1.7e-23 Score=190.33 Aligned_cols=146 Identities=15% Similarity=0.066 Sum_probs=120.8
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccC-CCCchHHHHHHHcC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAA-DGGITALHMAALNG 107 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d-~~G~TpLh~Aa~~g 107 (431)
.++++||.|++.|+.+.++.++..+ ++.++ ..|.||||+|+.+|
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~~~~-----------------------------------~~~~~~~~g~T~Lh~A~~~~ 49 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELFEKG-----------------------------------YEDKESVLKSNILYDVLRNN 49 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHHHHS-----------------------------------SSCHHHHHTTTHHHHHTTCS
T ss_pred ccccHHHHHHHcCCHHHHHHHHhcC-----------------------------------cccccccCCCCHHHHHHHcC
Confidence 3578999999999999999988542 23333 56999999999999
Q ss_pred CH----HHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCC------HHHHHHHHHCCCCCcccCCCCC-cHH
Q 014068 108 YF----DCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGN------LKCCQVLLSRGASRMSLNCNGW-LPL 176 (431)
Q Consensus 108 ~~----e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~------~eivklLL~~GAdin~~d~~G~-TpL 176 (431)
+. ++|++||++|+++|.++.. |+||||+|+..|+ .+++++|+++|+++|.+|..|+ |||
T Consensus 50 ~~~~~~~iv~~Ll~~Gadvn~~d~~----------g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpL 119 (186)
T 3t8k_A 50 NDEARYKISMFLINKGADIKSRTKE----------GTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVF 119 (186)
T ss_dssp CHHHHHHHHHHHHHTTCCSSCCCTT----------CCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTT
T ss_pred CcchHHHHHHHHHHCCCCCCCCCCC----------CCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHH
Confidence 85 5999999999999999976 9999999999887 6899999999999999999999 999
Q ss_pred HHHHHhC-----cHHHHHHhc--CCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccc
Q 014068 177 DVARMWG-----RHWLEPLLA--PSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSS 227 (431)
Q Consensus 177 h~Aa~~g-----~~~v~~LL~--~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~ 227 (431)
|+|+..+ +.+++++|+ .+++++..+..+. |++++|.+.|..++
T Consensus 120 h~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~--------TpL~~A~~~~~~~~ 169 (186)
T 3t8k_A 120 KNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGL--------TALEFVKRCQKPIA 169 (186)
T ss_dssp GGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSC--------CHHHHHHTTTCHHH
T ss_pred HHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCC--------CHHHHHHHcCCHHH
Confidence 9999954 345766555 5888877765544 78888887665443
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=1.8e-23 Score=193.67 Aligned_cols=129 Identities=26% Similarity=0.303 Sum_probs=106.3
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhc-CCCCCCCCcchhhHhhhcCChhhHHhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVAD-FVPSVPFEVMNTQIEGDRGDGSSVKSK 79 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~-~~~~~~~~~~~l~~a~~~~~~~~~~~~ 79 (431)
|+||..|+.++|++|++.|++++..|. .|+||||+|+..|+.++|++|++. ++.
T Consensus 78 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~~------------------------ 132 (222)
T 3ehr_A 78 HEAAKRGNLSWLRECLDNRVGVNGLDK-AGSTALYWACHGGHKDIVEMLFTQPNIE------------------------ 132 (222)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHTTSTTCC------------------------
T ss_pred ccccccCcHHHHHHHHhCCCCccccCC-CCCCHHHHHHHcCCHHHHHHHHcCCCCC------------------------
Confidence 678999999999999999999999997 999999999999999999999976 543
Q ss_pred hhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 014068 80 CDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLL 159 (431)
Q Consensus 80 ~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL 159 (431)
++.+|..|.||||+|+..|+.++|++|+++|++++.++.. |.||||+|+..|+.++++.|+
T Consensus 133 ---------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~----------g~t~l~~A~~~~~~~~l~~l~ 193 (222)
T 3ehr_A 133 ---------LNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIE----------KKLAFDMATNAACASLLKKKQ 193 (222)
T ss_dssp ---------CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTT----------SCCHHHHCCSHHHHHHHC---
T ss_pred ---------ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC----------CCCHHHHhcchhHHHHHHHHh
Confidence 7889999999999999999999999999999999999976 999999999999999999999
Q ss_pred HCCCCCcccCCCCC
Q 014068 160 SRGASRMSLNCNGW 173 (431)
Q Consensus 160 ~~GAdin~~d~~G~ 173 (431)
+.|++.+..|..|+
T Consensus 194 ~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 194 GTDAVRTLSNAEDY 207 (222)
T ss_dssp --------------
T ss_pred ccchhhhccchhhh
Confidence 99999888776553
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=1.9e-22 Score=196.98 Aligned_cols=141 Identities=23% Similarity=0.149 Sum_probs=102.4
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhc---CChhhHH
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDR---GDGSSVK 77 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~---~~~~~~~ 77 (431)
|.|+..|+++.|++|++.|+ +-..+ + .....+..+.+++++|+.. +....++
T Consensus 156 ~~A~~~g~~~~v~~ll~~g~--------d~~~~---------------~--~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~ 210 (301)
T 2b0o_E 156 WTAICNRDLLSVLEAFANGQ--------DFGQP---------------L--PGPDAQAPEELVLHLAVKVANQASLPLVD 210 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTC--------CTTSC---------------E--ECSSSCSCEECHHHHHHHTCCTTTHHHHH
T ss_pred hhhhhccCHHHHHHHHhcCC--------ccccc---------------C--CCcccCCCCccHHHHHHHhcccCcHHHHH
Confidence 35778888888888887653 12110 0 0011344555666666654 5666666
Q ss_pred hhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHH
Q 014068 78 SKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQV 157 (431)
Q Consensus 78 ~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivkl 157 (431)
.++..+ ..+|.+|..|.||||+|+..|+.++|++||++|++++.+|.. |.||||+|+..|+.+++++
T Consensus 211 ~Ll~~g---advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~----------G~TpL~~A~~~~~~~iv~~ 277 (301)
T 2b0o_E 211 FIIQNG---GHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEA----------GETALDIARKKHHKECEEL 277 (301)
T ss_dssp HHHHHS---SCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTT----------SCCHHHHHHHHTCHHHHHH
T ss_pred HHHhcC---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC----------CCCHHHHHHHcCCHHHHHH
Confidence 666653 358889999999999999999999999999999999999976 9999999999999999999
Q ss_pred HHHCCCCCcccCCCCCcHHHHHHHhCcH
Q 014068 158 LLSRGASRMSLNCNGWLPLDVARMWGRH 185 (431)
Q Consensus 158 LL~~GAdin~~d~~G~TpLh~Aa~~g~~ 185 (431)
|+++|++ .|.||||+|+.+|+.
T Consensus 278 Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 278 LEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHH------TTSSCCC--------
T ss_pred HHHhcCC------CCCChhHHHHhcCCc
Confidence 9999886 588999999999874
No 98
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=4.9e-23 Score=176.29 Aligned_cols=120 Identities=28% Similarity=0.284 Sum_probs=107.8
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|++++..
T Consensus 15 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------- 68 (137)
T 3c5r_A 15 HIASIKGDIPSVEYLLQNGSDPNVKDH-AGWTPLHEACNHGHLKVVELLLQHKAL------------------------- 68 (137)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCc-------------------------
Confidence 679999999999999999999999997 999999999999999999999987654
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 160 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~ 160 (431)
++.+|..|.||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..+..+++++|.+
T Consensus 69 --------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~----------g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 69 --------VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIF----------GLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp --------TTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------SCCGGGGCCCHHHHHHHSCC--
T ss_pred --------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC----------CCCHHHHHhhccHHHHHhhccc
Confidence 7788889999999999999999999999999999999976 9999999999999999998887
Q ss_pred CCCC
Q 014068 161 RGAS 164 (431)
Q Consensus 161 ~GAd 164 (431)
.+..
T Consensus 131 ~~~s 134 (137)
T 3c5r_A 131 NESS 134 (137)
T ss_dssp ----
T ss_pred cccC
Confidence 7654
No 99
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=5e-22 Score=199.46 Aligned_cols=123 Identities=24% Similarity=0.189 Sum_probs=107.7
Q ss_pred CCchHHHHHHHh-CCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccC--CCCchHHHHHHH
Q 014068 29 SGRTALHFAAVN-GHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAA--DGGITALHMAAL 105 (431)
Q Consensus 29 ~G~TpLh~Aa~~-G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d--~~G~TpLh~Aa~ 105 (431)
.+.|+||+|+.. |+.+++++|++++++ +|..+ ..|.||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad---------------------------------vn~~~~~~~g~TpLh~Aa~ 244 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD---------------------------------VNWVNGGQDNATPLIQATA 244 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC---------------------------------TTCCCTTTTCCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC---------------------------------CCccccccCCCCHHHHHHH
Confidence 678899999998 999999999987765 66666 788999999999
Q ss_pred cCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcH
Q 014068 106 NGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRH 185 (431)
Q Consensus 106 ~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~ 185 (431)
.|+.++|++||++|++++..|.. |+||||+|+..|+.++|++||++|++++.+|.+|+||||+|+..|+.
T Consensus 245 ~g~~~iv~~LL~~Gadvn~~d~~----------G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~ 314 (368)
T 3jue_A 245 ANSLLACEFLLQNGANVNQADSA----------GRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANA 314 (368)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHcCCCCCCCCCC----------CCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCH
Confidence 99999999999999999988866 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCC
Q 014068 186 WLEPLLAPS 194 (431)
Q Consensus 186 ~v~~LL~~~ 194 (431)
+++++|+..
T Consensus 315 ~iv~lLl~~ 323 (368)
T 3jue_A 315 DIVTLLRLA 323 (368)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 988777643
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=2.2e-22 Score=169.15 Aligned_cols=106 Identities=25% Similarity=0.321 Sum_probs=98.4
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|++.+..
T Consensus 12 ~~A~~~~~~~~v~~ll~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------- 65 (123)
T 3aaa_C 12 MWALKNGDLDEVKDYVAKGEDVNRTLE-GGRKPLHYAADCGQLEILEFLLLKGAD------------------------- 65 (123)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTSCCT-TSSCHHHHHHHTTCHHHHHHHHTTTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCcCccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCC-------------------------
Confidence 579999999999999999999999997 999999999999999999999987664
Q ss_pred hhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcC
Q 014068 81 DQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGG 150 (431)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g 150 (431)
++.+|..|.||||+|+..|+.++|++|+++|++++.++.. |.||||+|...+
T Consensus 66 --------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~----------g~t~l~~A~~~~ 117 (123)
T 3aaa_C 66 --------INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPD----------GLTAFEATDNQA 117 (123)
T ss_dssp --------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHCCCHH
T ss_pred --------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC----------CCCHHHHhCCHH
Confidence 7889999999999999999999999999999999999976 999999995433
No 101
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.86 E-value=2e-24 Score=217.53 Aligned_cols=144 Identities=15% Similarity=0.088 Sum_probs=73.5
Q ss_pred CEeeccCCHHHHHHHHHcCCCC---cccCCCCCchHHHHHHHhCCHHHHHHHHhcCCC-----CCCCCcchhhHhhhcCC
Q 014068 1 MQACRYGHWEVVQTLLLFRCNV---TRADYLSGRTALHFAAVNGHVRCIRLVVADFVP-----SVPFEVMNTQIEGDRGD 72 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi---~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~-----~~~~~~~~l~~a~~~~~ 72 (431)
|+||..|+.++|++|+++|+.. +..+. .|.||||+|+..|+.++|++|++++++ ....+.++++.|+..++
T Consensus 97 h~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~-~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~ 175 (376)
T 2aja_A 97 FVAAITGCSSALDTLCLLLTSDEIVKVIQA-ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGH 175 (376)
T ss_dssp HHHHHHCCHHHHHHHTTC--CCSSCC--CH-HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCcHHHHHHhcc-CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCC
Confidence 4556666666666666665521 11222 455666666666666666666665531 11112455555555555
Q ss_pred hhhHHhhhhhhhhhhhhcc--cCCCCchHHHHHH-HcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhc
Q 014068 73 GSSVKSKCDQSALSKFVNK--AADGGITALHMAA-LNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACG 149 (431)
Q Consensus 73 ~~~~~~~~~~~~~~~~in~--~d~~G~TpLh~Aa-~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~ 149 (431)
.++++.++..+. .++. .|..|.||||+|+ .+|+.++|++|++.|+ + |.||||+|+..
T Consensus 176 ~eiv~~Ll~~ga---~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-----~------------~~taL~~Aa~~ 235 (376)
T 2aja_A 176 LHVLNRLCELAP---TEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-----M------------LAYAEIHEFEY 235 (376)
T ss_dssp HHHHHHHHHSCG---GGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-----H------------HHHHHHCTTTT
T ss_pred HHHHHHHHHcCC---ccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-----c------------cchHHHHHHHC
Confidence 555555544432 1222 4444555555555 5555555555555442 1 44555555555
Q ss_pred CCHHHHHHHHHCCCCC
Q 014068 150 GNLKCCQVLLSRGASR 165 (431)
Q Consensus 150 g~~eivklLL~~GAdi 165 (431)
|+.+++++|+++|+++
T Consensus 236 g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 236 GEKYVNPFIARHVNRL 251 (376)
T ss_dssp TTTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCccc
Confidence 5555555555555444
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.8e-21 Score=155.60 Aligned_cols=93 Identities=44% Similarity=0.663 Sum_probs=86.9
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCC
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALNGY 108 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~ 108 (431)
+|+||||+|+..|+.+++++|++++.. ++.+|..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------------------------------~n~~d~~g~t~L~~A~~~~~ 47 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD---------------------------------VNAKDKNGRTPLHLAARNGH 47 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC---------------------------------TTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC---------------------------------CcccCCCCCCHHHHHHHcCC
Confidence 489999999999999999999987665 78899999999999999999
Q ss_pred HHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCC
Q 014068 109 FDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGAS 164 (431)
Q Consensus 109 ~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAd 164 (431)
.+++++|+++|++++.+|.. |.||||+|+..|+.+++++|+++||+
T Consensus 48 ~~~v~~Ll~~ga~~~~~d~~----------g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 48 LEVVKLLLEAGADVNAKDKN----------GRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCCccCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999976 99999999999999999999999985
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=9.8e-22 Score=197.31 Aligned_cols=117 Identities=23% Similarity=0.172 Sum_probs=69.5
Q ss_pred CCchHHHHHHHc-CCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCC
Q 014068 95 GGITALHMAALN-GYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGW 173 (431)
Q Consensus 95 ~G~TpLh~Aa~~-g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~ 173 (431)
.+.|+||+|+.. |+.++|++||++|++++..+.. ..|.||||+|+..|+.++|++|+++|+++|.+|..|+
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~--------~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~ 269 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGG--------QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGR 269 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTT--------TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccc--------cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 455666666666 6666666666666666665521 1266666666666666666666666666666666666
Q ss_pred cHHHHHHHhCcHHHHHHhc-CCCCCCCCCCCCCCCCchhhhhHHHHHHHcCCccc
Q 014068 174 LPLDVARMWGRHWLEPLLA-PSSDAVMPRFHPSNYLSLPLLSVLNVARECGLLSS 227 (431)
Q Consensus 174 TpLh~Aa~~g~~~v~~LL~-~~a~~~~~~~~~~~~~~~~l~t~l~~A~~~G~~~~ 227 (431)
||||+|+..|+.+++++|+ .+++++..+..+. |++++|...|..++
T Consensus 270 TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~--------TpL~~A~~~g~~~i 316 (368)
T 3jue_A 270 GPLHHATILGHTGLACLFLKRGADLGARDSEGR--------DPLTIAMETANADI 316 (368)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC--------CHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCC--------CHHHHHHHCCCHHH
Confidence 6666666666666654443 3455444433322 55555555555433
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=2.5e-21 Score=186.95 Aligned_cols=130 Identities=26% Similarity=0.244 Sum_probs=114.1
Q ss_pred CchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHc---
Q 014068 30 GRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAALN--- 106 (431)
Q Consensus 30 G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~--- 106 (431)
..++|+.|+..|+.+.++.|++.+...... ..++..|..|.||||+|+..
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~---------------------------~~l~~~~~~g~t~Lh~A~~~~~~ 182 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEK---------------------------IPLANGHEPDETALHLAVRSVDR 182 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSB---------------------------CCCSSCSSTTCBHHHHHHHHCCT
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhh---------------------------ccccccccCCCCcchHHHHhccc
Confidence 357899999999999999999876541100 01566688899999999999
Q ss_pred CCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcHH
Q 014068 107 GYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRHW 186 (431)
Q Consensus 107 g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~~ 186 (431)
|+.++|++|+++|+++|..|.. |+||||+|+..|+.++|++|+++|++++.+|.+|+||||+|+..|+.+
T Consensus 183 ~~~~~v~~Ll~~ga~in~~d~~----------g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~ 252 (278)
T 1dcq_A 183 TSLHIVDFLVQNSGNLDKQTGK----------GSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEH 252 (278)
T ss_dssp TTHHHHHHHHHHCSCTTCCCTT----------CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred chHHHHHHHHHCCCCccccCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHH
Confidence 8999999999999999999976 999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCC
Q 014068 187 LEPLLAPSSD 196 (431)
Q Consensus 187 v~~LL~~~a~ 196 (431)
++++|.+...
T Consensus 253 ~v~~Ll~~ga 262 (278)
T 1dcq_A 253 CEELLTQALS 262 (278)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHcCC
Confidence 9888866543
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=1.1e-21 Score=162.70 Aligned_cols=108 Identities=32% Similarity=0.393 Sum_probs=95.4
Q ss_pred cCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHH
Q 014068 25 ADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAA 104 (431)
Q Consensus 25 ~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa 104 (431)
+|. +|+||||+|+..|+.+++++|++++.. ++.+|..|.||||+|+
T Consensus 5 ~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~---------------------------------~~~~d~~g~t~L~~A~ 50 (115)
T 2l6b_A 5 GSK-DGNTPLHNAAKNGHAEEVKKLLSKGAD---------------------------------VNARSKDGNTPLHLAA 50 (115)
T ss_dssp CSC-SSCCHHHHHHHHTCHHHHHHHTTTTCC---------------------------------SSCCCSSSCCTTHHHH
T ss_pred cCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC---------------------------------CCCcCCCCCCHHHHHH
Confidence 455 899999999999999999999977554 7788889999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHH
Q 014068 105 LNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPL 176 (431)
Q Consensus 105 ~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpL 176 (431)
..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|+++|.++..|.||-
T Consensus 51 ~~~~~~~~~~Ll~~g~~~~~~d~~----------g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 51 KNGHAEIVKLLLAKGADVNARSKD----------GNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHTTTTCCTTCCCTT----------CCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HcCcHHHHHHHHHcCCCCcccCCC----------CCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 999999999999999999988866 99999999999999999999999999999999998874
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=2.6e-21 Score=186.78 Aligned_cols=120 Identities=23% Similarity=0.291 Sum_probs=111.0
Q ss_pred EeeccCCHHHHHHHHHcCCCCcc------cCCCCCchHHHHHHHh---CCHHHHHHHHhcCCCCCCCCcchhhHhhhcCC
Q 014068 2 QACRYGHWEVVQTLLLFRCNVTR------ADYLSGRTALHFAAVN---GHVRCIRLVVADFVPSVPFEVMNTQIEGDRGD 72 (431)
Q Consensus 2 ~Aa~~G~~evVk~LL~~gadi~~------~d~~~G~TpLh~Aa~~---G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~ 72 (431)
.|+..|+.+.++.|++.|++++. .+. .|+||||+|+.. |+.+++++|+++++.
T Consensus 136 ~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~-~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~----------------- 197 (278)
T 1dcq_A 136 EAVKTRDIFGLLQAYADGVDLTEKIPLANGHE-PDETALHLAVRSVDRTSLHIVDFLVQNSGN----------------- 197 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSS-TTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-----------------
T ss_pred hHhhhcccHHHHHHHHhhcchhhhcccccccc-CCCCcchHHHHhcccchHHHHHHHHHCCCC-----------------
Confidence 57889999999999999999553 355 899999999999 999999999988765
Q ss_pred hhhHHhhhhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCH
Q 014068 73 GSSVKSKCDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNL 152 (431)
Q Consensus 73 ~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~ 152 (431)
+|.+|..|.||||+|+..|+.++|++||++|++++.+|.. |.||||+|+..|+.
T Consensus 198 ----------------in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~----------g~tpL~~A~~~~~~ 251 (278)
T 1dcq_A 198 ----------------LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANES----------GETPLDIAKRLKHE 251 (278)
T ss_dssp ----------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCH
T ss_pred ----------------ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCC----------CCCHHHHHHHcCCH
Confidence 8899999999999999999999999999999999999976 99999999999999
Q ss_pred HHHHHHHHCCCCC
Q 014068 153 KCCQVLLSRGASR 165 (431)
Q Consensus 153 eivklLL~~GAdi 165 (431)
+++++|+++|++.
T Consensus 252 ~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 252 HCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCC
Confidence 9999999999864
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.85 E-value=5.2e-21 Score=152.90 Aligned_cols=90 Identities=40% Similarity=0.537 Sum_probs=84.3
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCc
Q 014068 95 GGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWL 174 (431)
Q Consensus 95 ~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~T 174 (431)
+|.||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.+++++|+++|++++.+|..|+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~----------g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 70 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN----------GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT 70 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCC
Confidence 4899999999999999999999999999999976 999999999999999999999999999999999999
Q ss_pred HHHHHHHhCcHHHHHHhcCC
Q 014068 175 PLDVARMWGRHWLEPLLAPS 194 (431)
Q Consensus 175 pLh~Aa~~g~~~v~~LL~~~ 194 (431)
|||+|+..|+.+++++|.+.
T Consensus 71 ~l~~A~~~~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 71 PLHLAARNGHLEVVKLLLEA 90 (93)
T ss_dssp HHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHc
Confidence 99999999999998877653
No 108
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=9.2e-23 Score=205.38 Aligned_cols=163 Identities=13% Similarity=0.129 Sum_probs=122.0
Q ss_pred cCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCC------CCCCCCcchhhHhhhcCChhhHHhh
Q 014068 6 YGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFV------PSVPFEVMNTQIEGDRGDGSSVKSK 79 (431)
Q Consensus 6 ~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~------~~~~~~~~~l~~a~~~~~~~~~~~~ 79 (431)
.++.+++++|+++|+ +++||||+|+..|+.++|++|++++. ..+..+.++++.|+..|+.++++.+
T Consensus 76 ~~~~~~~~~l~~~g~--------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~L 147 (376)
T 2aja_A 76 RNAKQLWSDAHKKGI--------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRL 147 (376)
T ss_dssp TTCTTHHHHHHHHTC--------CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCHHHHHHHHHcCC--------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHH
Confidence 355666677776654 45699999999999999999999887 3444566788888888888888888
Q ss_pred hhhhhhhhhhcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCc--ccccCCCccccCCCCCcHHHHHH-hcCCHHHHH
Q 014068 80 CDQSALSKFVNKAADGGITALHMAALNGYFDCVQLLLDLHANVSA--VTFHYGTSMDLIGAGSTPLHFAA-CGGNLKCCQ 156 (431)
Q Consensus 80 ~~~~~~~~~in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~--~d~~~~~~~~~~~~G~TpLh~Aa-~~g~~eivk 156 (431)
+..+.-....+..+.+ .||||+|+..|+.++|++|+++|++++. .+.. |.||||+|+ ..|+.++|+
T Consensus 148 l~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~----------g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 148 CELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAE----------NYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp HHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHH----------HHHHHHHHHSTTCCHHHHH
T ss_pred HhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCC----------CCCHHHHHHHHCCCHHHHH
Confidence 7765311111222222 7888888888888888888888888776 6655 888888888 888888888
Q ss_pred HHHHCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCC
Q 014068 157 VLLSRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS 194 (431)
Q Consensus 157 lLL~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~ 194 (431)
+|+++|++ |.||||+|+.+|+.+++++|...
T Consensus 217 ~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ 247 (376)
T 2aja_A 217 FLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARH 247 (376)
T ss_dssp HHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHH
T ss_pred HHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhc
Confidence 88887742 77888888888888887777653
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=7.8e-21 Score=197.96 Aligned_cols=134 Identities=22% Similarity=0.158 Sum_probs=112.2
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHHHHH---
Q 014068 29 SGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHMAAL--- 105 (431)
Q Consensus 29 ~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~Aa~--- 105 (431)
...+.||.|+..|+.++|+.|++++++.+... .....|..|.||||+|+.
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~---------------------------~~~~~~~~g~t~Lh~A~~~a~ 183 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPL---------------------------PGPDAQAPEELVLHLAVKVAN 183 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCB---------------------------CCSSSCCSCBCHHHHHHHTCC
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCC---------------------------CCcccccccchHHHHHHHhcc
Confidence 34578999999999999999999876511100 011237789999999966
Q ss_pred cCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCCCCCcHHHHHHHhCcH
Q 014068 106 NGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNCNGWLPLDVARMWGRH 185 (431)
Q Consensus 106 ~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~~G~TpLh~Aa~~g~~ 185 (431)
.|+.++|++||++|+++|..|.. |+||||+|+..|+.++|++||++||+++.+|.+|+||||+|+..|+.
T Consensus 184 ~g~~~~v~~Ll~~ga~vn~~d~~----------g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 253 (497)
T 3lvq_E 184 QASLPLVDFIIQNGGHLDAKAAD----------GNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHK 253 (497)
T ss_dssp TTTHHHHHHHHHHSCCTTCCCSS----------SCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCH
T ss_pred cccHHHHHHHHHcCCCCCccCCC----------CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 99999999999999999999976 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHhc-CCCCCCC
Q 014068 186 WLEPLLA-PSSDAVM 199 (431)
Q Consensus 186 ~v~~LL~-~~a~~~~ 199 (431)
+++++|+ .+++++.
T Consensus 254 ~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 254 ECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHHHHHHTCC----
T ss_pred HHHHHHHHhCCCCCC
Confidence 9977665 4555543
No 110
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=4.8e-21 Score=172.45 Aligned_cols=132 Identities=29% Similarity=0.310 Sum_probs=120.0
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|++ |++++..|. .|+||||+|+..|+.+++++|++.++.
T Consensus 49 ~~A~~~g~~~~v~~Ll~-~~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------------------- 101 (183)
T 3deo_A 49 WTAARKADEQALSQLLE-DRDVDAVDE-NGRTALLFVAGLGSDKCVRLLAEAGAD------------------------- 101 (183)
T ss_dssp HHHHHTTCHHHHHHHTT-TSCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHh-cCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCC-------------------------
Confidence 57899999999999999 999999997 999999999999999999999988765
Q ss_pred hhhhhhhhhcccC-CCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 014068 81 DQSALSKFVNKAA-DGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLL 159 (431)
Q Consensus 81 ~~~~~~~~in~~d-~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL 159 (431)
++.++ ..|.||||+|+..|+.+++++|+++|++++.+|.. |.||||+|+..++.
T Consensus 102 --------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~----------g~tpl~~A~~~~~~------- 156 (183)
T 3deo_A 102 --------LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDER----------GLTALELAREILKT------- 156 (183)
T ss_dssp --------TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT----------SCCHHHHHHHHHHT-------
T ss_pred --------CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCC----------CCCHHHHHHHhccC-------
Confidence 67777 88999999999999999999999999999999976 99999999874432
Q ss_pred HCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcCC
Q 014068 160 SRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAPS 194 (431)
Q Consensus 160 ~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~~ 194 (431)
..+.++|++|+..|+.+++++|...
T Consensus 157 ----------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 157 ----------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp ----------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred ----------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 4568999999999999999998754
No 111
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=2.6e-21 Score=182.69 Aligned_cols=131 Identities=29% Similarity=0.317 Sum_probs=119.5
Q ss_pred CEeeccCCHHHHHHHHHcCCCCcccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhh
Q 014068 1 MQACRYGHWEVVQTLLLFRCNVTRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKC 80 (431)
Q Consensus 1 H~Aa~~G~~evVk~LL~~gadi~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 80 (431)
|+|+..|+.++|++|++ |++++..|. .|+||||+|+..|+.++|++|+++++.
T Consensus 50 ~~A~~~g~~~~v~~Ll~-~~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------------------- 102 (244)
T 3ui2_A 50 WTAARKADEQALSQLLE-DRDVDAVDE-NGRTALLFVAGLGSDKCVRLLAEAGAD------------------------- 102 (244)
T ss_dssp HHHHTTTCHHHHHHTTT-TCCTTCBCT-TSCBHHHHHHHHTCHHHHHHHHHTTCC-------------------------
T ss_pred HHHHHcCCHHHHHHHHc-CCCCCCcCC-CCCCHHHHHHHCCCHHHHHHHHHcCCC-------------------------
Confidence 67999999999999999 999999997 999999999999999999999988765
Q ss_pred hhhhhhhhhcccC-CCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 014068 81 DQSALSKFVNKAA-DGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLL 159 (431)
Q Consensus 81 ~~~~~~~~in~~d-~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL 159 (431)
++.++ ..|.||||+|+..|+.++|++|+++|++++.++.. |.||||+|+..++
T Consensus 103 --------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~----------g~t~l~~A~~~~~-------- 156 (244)
T 3ui2_A 103 --------LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDER----------GLTALELAREILK-------- 156 (244)
T ss_dssp --------TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------CCCHHHHHHHHHT--------
T ss_pred --------CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC----------CCcHHHHHHHHHh--------
Confidence 77777 78999999999999999999999999999999976 9999999986322
Q ss_pred HCCCCCcccCCCCCcHHHHHHHhCcHHHHHHhcC
Q 014068 160 SRGASRMSLNCNGWLPLDVARMWGRHWLEPLLAP 193 (431)
Q Consensus 160 ~~GAdin~~d~~G~TpLh~Aa~~g~~~v~~LL~~ 193 (431)
+..+.||||+|+..|+.+++++|..
T Consensus 157 ---------~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 157 ---------TTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp ---------TCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ---------ccCCCCHHHHHHHcChHHHHHHHHH
Confidence 2578899999999999999988875
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=2.7e-19 Score=147.76 Aligned_cols=94 Identities=31% Similarity=0.308 Sum_probs=86.1
Q ss_pred hcccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCccc
Q 014068 89 VNKAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSL 168 (431)
Q Consensus 89 in~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~ 168 (431)
....|.+|.||||+|+..|+.+++++|+++|++++..|.. |.||||+|+..|+.+++++|+++|++++.+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~----------g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~ 86 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKN----------GSTPLHLAARNGHLEVVKLLLEAGADVXAQ 86 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT----------CCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCC----------CCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Confidence 5677889999999999999999999999999999999866 999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHhc
Q 014068 169 NCNGWLPLDVARMWGRHWLEPLLA 192 (431)
Q Consensus 169 d~~G~TpLh~Aa~~g~~~v~~LL~ 192 (431)
|..|+||||+|+..|+.+++++|.
T Consensus 87 d~~g~tpl~~A~~~~~~~~~~~L~ 110 (110)
T 2zgd_A 87 DKFGKTAFDISIDNGNEDLAEILQ 110 (110)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHC
T ss_pred ccCCCcHHHHHHHcCCHHHHHHhC
Confidence 999999999999999999999874
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=2.3e-19 Score=148.61 Aligned_cols=101 Identities=34% Similarity=0.407 Sum_probs=92.3
Q ss_pred ccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHHHHCCCCCcccCC
Q 014068 91 KAADGGITALHMAALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVLLSRGASRMSLNC 170 (431)
Q Consensus 91 ~~d~~G~TpLh~Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~~GAdin~~d~ 170 (431)
.+|.+|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~----------g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~ 73 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKD----------GNTPLHLAAKNGHAEIVKLLLAKGADVNARSK 73 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSS----------SCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC----------CCCHHHHHHHcCcHHHHHHHHHcCCCCcccCC
Confidence 56889999999999999999999999999999999866 99999999999999999999999999999999
Q ss_pred CCCcHHHHHHHhCcHHHHHHhc-CCCCCCCCC
Q 014068 171 NGWLPLDVARMWGRHWLEPLLA-PSSDAVMPR 201 (431)
Q Consensus 171 ~G~TpLh~Aa~~g~~~v~~LL~-~~a~~~~~~ 201 (431)
.|+||||+|+..++.+++++|. .+++++...
T Consensus 74 ~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~ 105 (115)
T 2l6b_A 74 DGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105 (115)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHS
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCC
Confidence 9999999999999999976665 466665543
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=7.8e-18 Score=138.92 Aligned_cols=92 Identities=29% Similarity=0.355 Sum_probs=83.0
Q ss_pred cccCCCCCchHHHHHHHhCCHHHHHHHHhcCCCCCCCCcchhhHhhhcCChhhHHhhhhhhhhhhhhcccCCCCchHHHH
Q 014068 23 TRADYLSGRTALHFAAVNGHVRCIRLVVADFVPSVPFEVMNTQIEGDRGDGSSVKSKCDQSALSKFVNKAADGGITALHM 102 (431)
Q Consensus 23 ~~~d~~~G~TpLh~Aa~~G~~eiv~~LL~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~in~~d~~G~TpLh~ 102 (431)
...+. +|.||||+|+..|+.+++++|++++.. ++.+|..|.||||+
T Consensus 18 ~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~---------------------------------i~~~d~~g~tpLh~ 63 (110)
T 2zgd_A 18 SHMGS-DLGKKLLEAARAGQDDEVRILMANGAD---------------------------------VAAKDKNGSTPLHL 63 (110)
T ss_dssp ----C-CHHHHHHHHHHHTCHHHHHHHHHTTCC---------------------------------TTCCCTTCCCHHHH
T ss_pred cccCC-ccchHHHHHHHcCCHHHHHHHHHcCCC---------------------------------CCccCCCCCCHHHH
Confidence 34554 899999999999999999999987654 78889999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCcccccCCCccccCCCCCcHHHHHHhcCCHHHHHHH
Q 014068 103 AALNGYFDCVQLLLDLHANVSAVTFHYGTSMDLIGAGSTPLHFAACGGNLKCCQVL 158 (431)
Q Consensus 103 Aa~~g~~e~VklLL~~Gadvn~~d~~~~~~~~~~~~G~TpLh~Aa~~g~~eivklL 158 (431)
|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|
T Consensus 64 A~~~~~~~~v~~Ll~~ga~~~~~d~~----------g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 64 AARNGHLEVVKLLLEAGADVXAQDKF----------GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTT----------SCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCccccccC----------CCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999976 99999999999999999987
No 115
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=97.63 E-value=9.3e-06 Score=59.87 Aligned_cols=53 Identities=28% Similarity=0.574 Sum_probs=42.4
Q ss_pred CCCchhhhhhccccchhcc--CCChH-HHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceec
Q 014068 233 DDADTCAVCLERACTVAAE--GCRHE-LCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKL 297 (431)
Q Consensus 233 ~~~~~C~vcle~~~~va~~--~CgH~-~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l 297 (431)
.....|.+|++.....+.. +|||. +|..|+..+-... ..||+||+.|.+++++
T Consensus 6 ~~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~------------~~CPiCR~~i~~~i~i 61 (64)
T 2vje_A 6 NAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRN------------KPCPVCRQPIQMIVLT 61 (64)
T ss_dssp GGGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHTT------------CCCTTTCCCCCEEEEE
T ss_pred CCcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHcC------------CcCCCcCcchhceEee
Confidence 3446799999999888876 99999 6999998775321 2599999999988764
No 116
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.54 E-value=2.4e-05 Score=58.37 Aligned_cols=52 Identities=31% Similarity=0.749 Sum_probs=43.5
Q ss_pred CCCCchhhhhhccccchhccCCChH-HHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCC
Q 014068 232 SDDADTCAVCLERACTVAAEGCRHE-LCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPG 299 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~va~~~CgH~-~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~ 299 (431)
..+...|.+|++....++..+|||. +|..|+... ..||+||..|..++++-.
T Consensus 12 ~~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~----------------~~CP~CR~~i~~~~~i~~ 64 (68)
T 2ea5_A 12 EENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYF----------------QQCPMCRQFVQESFALSG 64 (68)
T ss_dssp CCCSSCCSSSSSSCCCCEETTTTBCCSCTTHHHHC----------------SSCTTTCCCCCCEECCCS
T ss_pred CCCCCCCCCcCcCCCCEEEECCCChhhhHHHHhcC----------------CCCCCCCcchhceEEeec
Confidence 3445679999999999999999999 799998732 259999999999887754
No 117
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=97.49 E-value=1.5e-05 Score=58.49 Aligned_cols=51 Identities=25% Similarity=0.547 Sum_probs=40.5
Q ss_pred Cchhhhhhccccchhcc--CCChH-HHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceec
Q 014068 235 ADTCAVCLERACTVAAE--GCRHE-LCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKL 297 (431)
Q Consensus 235 ~~~C~vcle~~~~va~~--~CgH~-~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l 297 (431)
...|.+|++.....+.. +|||. +|..|+..+-... ..||+||..|.+++++
T Consensus 7 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~------------~~CPiCR~~i~~~i~i 60 (63)
T 2vje_B 7 LKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAG------------ASCPICKKEIQLVIKV 60 (63)
T ss_dssp GSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTT------------CBCTTTCCBCCEEEEE
T ss_pred CCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhC------------CcCCCcCchhhceEEE
Confidence 46799999988766555 99999 7999998775321 2599999999988775
No 118
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=97.18 E-value=7.1e-05 Score=57.52 Aligned_cols=48 Identities=29% Similarity=0.596 Sum_probs=40.9
Q ss_pred chhhhhhccccchhccCCChH-HHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCC
Q 014068 236 DTCAVCLERACTVAAEGCRHE-LCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPG 299 (431)
Q Consensus 236 ~~C~vcle~~~~va~~~CgH~-~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~ 299 (431)
..|.+|++....++..+|||. +|..|+..+ ..||+||..|.+++++--
T Consensus 19 ~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~----------------~~CP~Cr~~i~~~~~i~~ 67 (79)
T 2yho_A 19 MLCMVCCEEEINSTFCPCGHTVCCESCAAQL----------------QSCPVCRSRVEHVQHVYL 67 (79)
T ss_dssp TBCTTTSSSBCCEEEETTCBCCBCHHHHTTC----------------SBCTTTCCBCCEEEECBC
T ss_pred CEeEEeCcccCcEEEECCCCHHHHHHHHHhc----------------CcCCCCCchhhCeEEEEe
Confidence 469999999999999999999 799998643 169999999999977643
No 119
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=97.17 E-value=5.8e-05 Score=57.17 Aligned_cols=46 Identities=28% Similarity=0.678 Sum_probs=39.5
Q ss_pred chhhhhhccccchhccCCChH-HHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceec
Q 014068 236 DTCAVCLERACTVAAEGCRHE-LCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKL 297 (431)
Q Consensus 236 ~~C~vcle~~~~va~~~CgH~-~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l 297 (431)
..|.+|++........+|||. +|..|+..+ ..||+||..|.+.+++
T Consensus 25 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~----------------~~CP~Cr~~i~~~~~i 71 (74)
T 4ic3_A 25 KLCKICMDRNIAIVFVPCGHLVTCKQCAEAV----------------DKCPMCYTVITFKQKI 71 (74)
T ss_dssp TBCTTTSSSBCCEEEETTCCBCCCHHHHTTC----------------SBCTTTCCBCSEEEEC
T ss_pred CCCCCCCCCCCCEEEcCCCChhHHHHhhhcC----------------ccCCCcCcCccCcEEE
Confidence 469999999999889999999 899998654 3599999999987764
No 120
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=97.14 E-value=0.00024 Score=54.04 Aligned_cols=57 Identities=25% Similarity=0.503 Sum_probs=41.4
Q ss_pred CCCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 232 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
......|.+|++........+|||.+|..|+..+-.... ....+...||+||..+..
T Consensus 9 ~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~-----~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 9 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAV-----TSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCS-----SSCCCCCCCSSSCCCCCS
T ss_pred cccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcc-----cCCCCCCcCCCCCCcCCH
Confidence 344567999999887777789999999999976643221 112345789999988764
No 121
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.13 E-value=9.7e-05 Score=56.02 Aligned_cols=46 Identities=28% Similarity=0.678 Sum_probs=38.4
Q ss_pred chhhhhhccccchhccCCChH-HHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceec
Q 014068 236 DTCAVCLERACTVAAEGCRHE-LCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKL 297 (431)
Q Consensus 236 ~~C~vcle~~~~va~~~CgH~-~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l 297 (431)
..|.+|++.....+..+|||. +|..|+... ..||+||..|...+++
T Consensus 26 ~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~~----------------~~CP~Cr~~i~~~~~i 72 (75)
T 2ecg_A 26 KLCKICMDRNIAIVFVPCGHLVTCKQCAEAV----------------DKCPMCYTVITFKQKI 72 (75)
T ss_dssp HSCSSSCSSCCCBCCSSSCCCCBCHHHHHHC----------------SBCTTTCCBCCCCCBC
T ss_pred CCCCcCCCCCCCEEEecCCCHHHHHHHhhCC----------------CCCccCCceecCcEEE
Confidence 459999999999999999999 899998532 3599999999876554
No 122
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.05 E-value=0.0004 Score=53.28 Aligned_cols=55 Identities=27% Similarity=0.606 Sum_probs=41.3
Q ss_pred CCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 233 DDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 233 ~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
.....|.+|++........+|||.+|..|+..+-.... ...+...||+||..+..
T Consensus 17 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~------~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNR------NTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSB------CTTSCBCCTTTCCCCCT
T ss_pred ccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhcc------CCCCCCCCCCCCCcCCH
Confidence 34567999999887777789999999999988755432 12234679999988764
No 123
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.05 E-value=0.00023 Score=53.47 Aligned_cols=57 Identities=26% Similarity=0.610 Sum_probs=41.8
Q ss_pred CCCCchhhhhhccccc---hhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCCC
Q 014068 232 SDDADTCAVCLERACT---VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGS 300 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~---va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~~ 300 (431)
......|.||++.... +...+|||.+|..|+..+-... ..||+||..|..+.+++++
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~------------~~CP~Cr~~~~~~~~~~~~ 71 (74)
T 2ep4_A 12 LNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR------------KVCPLCNMPVLQLAQLSGP 71 (74)
T ss_dssp CCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC------------SBCTTTCCBCSSCCSCCCS
T ss_pred CCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC------------CcCCCcCcccccccccCCC
Confidence 3445679999988533 3444899999999988775432 1599999999888777653
No 124
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.79 E-value=0.00048 Score=51.48 Aligned_cols=52 Identities=25% Similarity=0.696 Sum_probs=39.9
Q ss_pred CCCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 232 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
......|.+|++........+|||.+|..|+..+-... .+...||+||..|.
T Consensus 17 ~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~---------~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 17 LQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETS---------CGFFKCPLCKTSVR 68 (73)
T ss_dssp CCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSS---------CSCCCCSSSCCCCC
T ss_pred CccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcC---------CCCCCCCCCCCcCC
Confidence 34456799999988877777999999999999885311 23357999998865
No 125
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=96.73 E-value=0.00035 Score=59.41 Aligned_cols=46 Identities=30% Similarity=0.691 Sum_probs=37.6
Q ss_pred hhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccc
Q 014068 237 TCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSF 294 (431)
Q Consensus 237 ~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~ 294 (431)
.|.+|++..-.....+|||.+|..|+..+-... ..||+||..|.+.
T Consensus 55 ~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 55 QCIICSEYFIEAVTLNCAHSFCSYCINEWMKRK------------IECPICRKDIKSK 100 (138)
T ss_dssp BCTTTCSBCSSEEEETTSCEEEHHHHHHHTTTC------------SBCTTTCCBCCCE
T ss_pred CCcccCcccCCceECCCCCCccHHHHHHHHHcC------------CcCCCCCCcCCCC
Confidence 599999998888888999999999998774321 2499999988654
No 126
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.72 E-value=0.0008 Score=50.26 Aligned_cols=52 Identities=17% Similarity=0.393 Sum_probs=39.0
Q ss_pred CCCCchhhhhhccccchhc-cCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccce
Q 014068 232 SDDADTCAVCLERACTVAA-EGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFT 295 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~va~-~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~ 295 (431)
......|.+|++....... .+|||.+|..|+..+-... ..||+||..|..-.
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~------------~~CP~Cr~~~~~~~ 64 (72)
T 2djb_A 12 LTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYS------------NRCPKCNIVVHQTQ 64 (72)
T ss_dssp CCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHC------------SSCTTTCCCCCSSC
T ss_pred cCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcC------------CcCCCcCcccCccc
Confidence 3445679999998876555 4999999999998775431 35999998876543
No 127
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.65 E-value=0.0004 Score=51.82 Aligned_cols=48 Identities=27% Similarity=0.618 Sum_probs=38.5
Q ss_pred CCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 234 DADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 234 ~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
....|.||++........+|||.+|..|+..+-... ..||+||..|..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~------------~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLG------------KRCALCRQEIPE 61 (71)
T ss_dssp SCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCS------------SBCSSSCCBCCH
T ss_pred CCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCC------------CcCcCcCchhCH
Confidence 446799999998887788999999999998764321 369999998863
No 128
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=96.62 E-value=0.00075 Score=49.86 Aligned_cols=52 Identities=29% Similarity=0.520 Sum_probs=37.9
Q ss_pred CCCCchhhhhhccc---cchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccce
Q 014068 232 SDDADTCAVCLERA---CTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFT 295 (431)
Q Consensus 232 ~~~~~~C~vcle~~---~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~ 295 (431)
......|.||++.. ..+...+|||.+|..|+..+-... ..||+||..|....
T Consensus 11 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~~~ 65 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITN------------KKCPICRVDIEAQL 65 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHC------------SBCTTTCSBSCSCC
T ss_pred CCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcC------------CCCcCcCccccCcC
Confidence 34456799998764 446678899999999998775442 14999999887543
No 129
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=96.62 E-value=0.00041 Score=48.73 Aligned_cols=47 Identities=28% Similarity=0.543 Sum_probs=35.7
Q ss_pred CCchhhhhhccccc----hhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 234 DADTCAVCLERACT----VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 234 ~~~~C~vcle~~~~----va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
....|.||++.... +...+|||.+|..|+..+-... ..||+||..|.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG------------YRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT------------CCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC------------CcCCCCCCcCC
Confidence 44679999987644 7788899999888887764432 35999998765
No 130
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.61 E-value=0.001 Score=50.89 Aligned_cols=55 Identities=25% Similarity=0.596 Sum_probs=39.9
Q ss_pred CCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 233 DDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 233 ~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
.....|.+|++........+|||.+|..|+..+-..... ..+...||+||..+..
T Consensus 17 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~------~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSML------DKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHH------TTSCCCCTTTCCSSCS
T ss_pred cCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhc------CCCCCcCCCCCCccCH
Confidence 445679999998877777899999998888776443110 1124579999988764
No 131
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.59 E-value=0.00071 Score=49.76 Aligned_cols=49 Identities=22% Similarity=0.650 Sum_probs=37.4
Q ss_pred CCCCchhhhhhccccch-------hccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 232 SDDADTCAVCLERACTV-------AAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~v-------a~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
......|.||++..... ...+|||.+|..|+..+-... ..||+||..|.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~ 67 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA------------NTCPTCRKKIN 67 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHC------------SSCTTTCCCCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcC------------CCCCCCCCccC
Confidence 34556799999986554 778999999999998775432 25999998875
No 132
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=96.57 E-value=0.00043 Score=51.01 Aligned_cols=53 Identities=30% Similarity=0.625 Sum_probs=39.9
Q ss_pred CCchhhhhhccccc-hhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecC
Q 014068 234 DADTCAVCLERACT-VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLP 298 (431)
Q Consensus 234 ~~~~C~vcle~~~~-va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~ 298 (431)
....|.+|++.... +...+|||.+|..|+..+-... ..||+||..+..+.+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~~~~~~ 57 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQN------------PTCPLCKVPVESVVHTI 57 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHS------------CSTTTTCCCCCCEECCC
T ss_pred CCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCc------------CcCcCCChhhHhhhhcc
Confidence 34679999998766 4778999999888887764322 25999999998765443
No 133
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.55 E-value=0.0013 Score=50.85 Aligned_cols=52 Identities=21% Similarity=0.554 Sum_probs=39.0
Q ss_pred CCCCchhhhhhccccc----hhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 232 SDDADTCAVCLERACT----VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~----va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
......|.+|++.... ....+|||.+|..|+..+-... .+...||+||..+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~---------~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS---------INGVRCPFCSKITR 67 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC---------SSCBCCTTTCCCBC
T ss_pred ccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC---------CCCcCCCCCCCccc
Confidence 3445679999998776 6777999999999998875443 12357999998753
No 134
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=96.53 E-value=0.00061 Score=47.88 Aligned_cols=48 Identities=33% Similarity=0.650 Sum_probs=34.6
Q ss_pred CCCchhhhhhccccc---hhccC-CChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 233 DDADTCAVCLERACT---VAAEG-CRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 233 ~~~~~C~vcle~~~~---va~~~-CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
.+...|.+|++.... +...+ |||.+|..|+..+-.. ...||+||..|.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~------------~~~CP~Cr~~~~ 54 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS------------HSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT------------CCSCSSSCCCSC
T ss_pred CCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc------------CCcCcCCCCEeE
Confidence 345679999988655 45554 9999999999877422 125999998763
No 135
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.50 E-value=0.00059 Score=50.61 Aligned_cols=51 Identities=22% Similarity=0.640 Sum_probs=39.8
Q ss_pred CCCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccce
Q 014068 232 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFT 295 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~ 295 (431)
......|.+|++.... ...+|||.+|..|+..+-. ....||+||..|....
T Consensus 12 ~~~~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~~------------~~~~CP~Cr~~~~~~~ 62 (70)
T 2ecn_A 12 LTDEEECCICMDGRAD-LILPCAHSFCQKCIDKWSD------------RHRNCPICRLQMTGAN 62 (70)
T ss_dssp CCCCCCCSSSCCSCCS-EEETTTEEECHHHHHHSSC------------CCSSCHHHHHCTTCCC
T ss_pred CCCCCCCeeCCcCccC-cccCCCCcccHHHHHHHHH------------CcCcCCCcCCcccCCC
Confidence 3445679999999888 8889999999999987632 1346999998887543
No 136
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.44 E-value=0.0016 Score=47.58 Aligned_cols=49 Identities=31% Similarity=0.682 Sum_probs=38.2
Q ss_pred CCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 233 DDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 233 ~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
.....|.+|++..-.....+|||.+|..|+..+-.. +...||+||..|.
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-----------~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSS-----------SSPKCTACQESIV 61 (66)
T ss_dssp CCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTT-----------SSCCCTTTCCCCC
T ss_pred CcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHh-----------CcCCCCCCCcCCC
Confidence 445679999998877777899999999999888531 1235999998865
No 137
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=96.41 E-value=0.00074 Score=50.07 Aligned_cols=49 Identities=22% Similarity=0.650 Sum_probs=37.5
Q ss_pred CCCCchhhhhhccccch-------hccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 232 SDDADTCAVCLERACTV-------AAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~v-------a~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
..+...|.+|++..... ...+|||.+|..|+..+-... ..||+||..+.
T Consensus 7 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~ 62 (71)
T 3ng2_A 7 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA------------NTCPTCRKKIN 62 (71)
T ss_dssp CTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC------------SBCTTTCCBCC
T ss_pred CCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC------------CCCCCCCCccC
Confidence 34456799999886554 788999999999998775432 25999998875
No 138
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.37 E-value=0.00085 Score=54.51 Aligned_cols=49 Identities=33% Similarity=0.743 Sum_probs=38.0
Q ss_pred chhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 236 DTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 236 ~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
..|.+|++........+|||.+|..|+..+-... .+...||+||..+..
T Consensus 22 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~---------~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQK---------KGPSQCPLCKNDITK 70 (112)
T ss_dssp TSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSS---------SSSCCCTTTSCCCCT
T ss_pred CCCcccChhhcCeEECCCCCHHHHHHHHHHHHhC---------CCCCCCcCCCCcCCH
Confidence 3589999988777778999999999998875432 123569999988764
No 139
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=96.30 E-value=0.002 Score=50.44 Aligned_cols=50 Identities=20% Similarity=0.478 Sum_probs=38.1
Q ss_pred CCCchhhhhhccccchhccC-CChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 233 DDADTCAVCLERACTVAAEG-CRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 233 ~~~~~C~vcle~~~~va~~~-CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
...-.|.+|++..-.....+ |||.+|..|+..+-.... ...||+||..+.
T Consensus 11 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~----------~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESD----------EHTCPTCHQNDV 61 (92)
T ss_dssp CTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCT----------TCCCTTTCCSSC
T ss_pred CcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcC----------CCcCcCCCCcCC
Confidence 34456999999887777778 999999999987754321 246999998864
No 140
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=96.25 E-value=0.00082 Score=50.95 Aligned_cols=55 Identities=22% Similarity=0.482 Sum_probs=38.9
Q ss_pred CCCchhhhhhcccc---chhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCC
Q 014068 233 DDADTCAVCLERAC---TVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPG 299 (431)
Q Consensus 233 ~~~~~C~vcle~~~---~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~ 299 (431)
.....|.||++... .+...+|||.+|..|+..+-... ..||+||..|..-...+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~~~~~~~ 70 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQH------------DSCPVCRKSLTGQNTATN 70 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTT------------CSCTTTCCCCCCSCSCCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcC------------CcCcCcCCccCCcccCCC
Confidence 34567999987653 34556899999999988774321 259999999876554444
No 141
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=96.20 E-value=0.0028 Score=48.36 Aligned_cols=50 Identities=22% Similarity=0.505 Sum_probs=35.3
Q ss_pred CCCchhhhhhcccc--chhccC--CChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 233 DDADTCAVCLERAC--TVAAEG--CRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 233 ~~~~~C~vcle~~~--~va~~~--CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
.+...|.||++... .++..+ |||.+|..|+...-.. +...||.||..+..
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~-----------~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTD-----------ENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTS-----------SCSBCTTTCCBCSS
T ss_pred ccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhc-----------CCCCCCCCCCccCC
Confidence 34457999999542 234444 9999999999877422 12469999988764
No 142
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=96.18 E-value=0.0012 Score=51.74 Aligned_cols=48 Identities=19% Similarity=0.456 Sum_probs=36.1
Q ss_pred CCCchhhhhhccccc---hhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 233 DDADTCAVCLERACT---VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 233 ~~~~~C~vcle~~~~---va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
.....|.||++.... +...+|||.+|..|+..+-... ..||+||..|.
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~------------~~CP~Cr~~~~ 88 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKS------------GTCPVCRCMFP 88 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTT------------CBCTTTCCBSS
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcC------------CcCcCcCccCC
Confidence 345679999987655 6667899999999998875321 25999998764
No 143
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=96.15 E-value=0.0011 Score=48.01 Aligned_cols=47 Identities=23% Similarity=0.660 Sum_probs=35.6
Q ss_pred Cchhhhhhccccch-------hccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 235 ADTCAVCLERACTV-------AAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 235 ~~~C~vcle~~~~v-------a~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
...|.+|++..... ...+|||.+|..|+..+-... ..||+||..+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA------------NTCPTCRKKINH 56 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHC------------SBCTTTCCBCTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcC------------CCCCCCCccCCc
Confidence 35688898876543 678999999999998775432 259999988763
No 144
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.13 E-value=0.0015 Score=49.85 Aligned_cols=47 Identities=23% Similarity=0.472 Sum_probs=38.0
Q ss_pred CCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 234 DADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 234 ~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
....|.+|++........+|||.+|..|+..+-... ..||+||..+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~------------~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRAT------------PRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHHC------------SBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHCC------------CcCCCcCcccc
Confidence 345699999988877788999999999998875431 35999999876
No 145
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=96.08 E-value=0.0016 Score=54.07 Aligned_cols=47 Identities=23% Similarity=0.533 Sum_probs=37.1
Q ss_pred chhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 236 DTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 236 ~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
..|.+|++........+|||.+|..|+..+-.. ....||+||..+..
T Consensus 53 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-----------~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 53 FQCICCQELVFRPITTVCQHNVCKDCLDRSFRA-----------QVFSCPACRYDLGR 99 (124)
T ss_dssp TBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHT-----------TCCBCTTTCCBCCT
T ss_pred CCCCcCChHHcCcEEeeCCCcccHHHHHHHHhH-----------CcCCCCCCCccCCC
Confidence 458999998877777899999999999877541 12369999988765
No 146
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=96.02 E-value=0.0016 Score=52.09 Aligned_cols=47 Identities=21% Similarity=0.557 Sum_probs=37.6
Q ss_pred Cchhhhhhccccchhc-cCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 235 ADTCAVCLERACTVAA-EGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 235 ~~~C~vcle~~~~va~-~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
...|.+|++..-.... .+|||.+|..|+..+-.... ..||+||..+.
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~-----------~~CP~Cr~~~~ 69 (100)
T 3lrq_A 22 VFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQR-----------AQCPHCRAPLQ 69 (100)
T ss_dssp HTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTC-----------SBCTTTCCBCC
T ss_pred CCCCccCCccccCccccCCCCChhhHHHHHHHHHHCc-----------CCCCCCCCcCC
Confidence 3459999998877777 99999999999988765431 35999998874
No 147
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=96.02 E-value=0.0021 Score=63.74 Aligned_cols=54 Identities=26% Similarity=0.551 Sum_probs=43.1
Q ss_pred CchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCC
Q 014068 235 ADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPG 299 (431)
Q Consensus 235 ~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~ 299 (431)
...|.+|++........+|||.+|..|+...-.. ....||+||..|.....+.-
T Consensus 332 ~~~C~ICle~~~~pv~lpCGH~FC~~Ci~~wl~~-----------~~~~CP~CR~~i~~~~~i~v 385 (389)
T 2y1n_A 332 FQLCKICAENDKDVKIEPCGHLMCTSCLTSWQES-----------EGQGCPFCRCEIKGTEPIVV 385 (389)
T ss_dssp SSBCTTTSSSBCCEEEETTCCEECHHHHHHHHHH-----------TCSBCTTTCCBCCEEEECSC
T ss_pred CCCCCccCcCCCCeEEeCCCChhhHHHHHHHHhc-----------CCCCCCCCCCccCCceeEec
Confidence 3579999999999999999999999999877542 11359999999987655443
No 148
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.97 E-value=0.0013 Score=49.42 Aligned_cols=48 Identities=25% Similarity=0.580 Sum_probs=35.1
Q ss_pred CCCchhhhhhccccc---hhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 233 DDADTCAVCLERACT---VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 233 ~~~~~C~vcle~~~~---va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
.....|.||++.... +...+|||.+|..|+..+-... ..||+||..|.
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~------------~~CP~Cr~~~~ 71 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKAN------------RTCPICRADSG 71 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHC------------SSCTTTCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcC------------CcCcCcCCcCC
Confidence 345679999976443 4677899999888887764332 25999998865
No 149
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=95.97 E-value=0.00053 Score=48.76 Aligned_cols=44 Identities=25% Similarity=0.545 Sum_probs=34.3
Q ss_pred CCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 234 DADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 234 ~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
....|.+|++........+|||.+|..|+.. ....||+||..+.
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~---------------~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEA---------------SGMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSS---------------SSSSCSSCCSSSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHcc---------------CCCCCCcCCcEee
Confidence 3456889999888888889999998887653 2357999998754
No 150
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=95.88 E-value=0.0016 Score=49.28 Aligned_cols=58 Identities=12% Similarity=0.138 Sum_probs=41.6
Q ss_pred CCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCCCCc
Q 014068 234 DADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGSPV 302 (431)
Q Consensus 234 ~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~~~~ 302 (431)
..-.|.+|++..-.....+|||.+|..|+..+-.. +...||+||..+..-...|+..+
T Consensus 7 ~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~-----------~~~~CP~C~~~~~~~~l~~n~~l 64 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDA-----------GHKTCPKSQETLLHAGLTPNYVL 64 (78)
T ss_dssp SSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTT-----------TCCBCTTTCCBCSSCCCEECTTT
T ss_pred ccCCCCCccccccCCEEcCCCCeecHHHHHHHHHH-----------CcCCCCCCcCCCChhhCccCHHH
Confidence 34568899988777677799999999999887532 13469999988765444444433
No 151
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=95.79 E-value=0.0025 Score=55.04 Aligned_cols=48 Identities=25% Similarity=0.587 Sum_probs=38.2
Q ss_pred chhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccc
Q 014068 236 DTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSF 294 (431)
Q Consensus 236 ~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~ 294 (431)
..|.+|++........+|||.+|..|+..+-... ...||+||..+..-
T Consensus 79 ~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~-----------~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 79 FMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQ-----------VFSCPACRHDLGQN 126 (150)
T ss_dssp TBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTT-----------CCBCTTTCCBCCTT
T ss_pred CEeecCChhhcCCEEcCCCCchhHHHHHHHHHhC-----------CCcCCCCCccCCCC
Confidence 4599999988887778999999999998886431 23599999887654
No 152
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=95.74 E-value=0.0017 Score=48.85 Aligned_cols=49 Identities=20% Similarity=0.478 Sum_probs=37.3
Q ss_pred CCchhhhhhccccchhccC-CChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 234 DADTCAVCLERACTVAAEG-CRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 234 ~~~~C~vcle~~~~va~~~-CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
....|.+|++..-.....+ |||.+|..|+..+-... +...||+||..+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~----------~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 14 DELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLES----------DEHTCPTCHQNDV 63 (74)
T ss_dssp GGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHS----------SSSCCSSSCCSSC
T ss_pred CCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhc----------CCCcCCCCCCcCC
Confidence 3456999999887777788 99999988888775442 1246999998644
No 153
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=95.72 E-value=0.0026 Score=46.33 Aligned_cols=46 Identities=24% Similarity=0.538 Sum_probs=32.5
Q ss_pred chhhhhhc-cccch----hccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 236 DTCAVCLE-RACTV----AAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 236 ~~C~vcle-~~~~v----a~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
..|.+|++ ..... ...+|||.+|..|+..+-... ...||+||..+.
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~-----------~~~CP~Cr~~~~ 54 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRG-----------AGNCPECGTPLR 54 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTT-----------SSSCTTTCCCCS
T ss_pred CcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcC-----------CCcCCCCCCccc
Confidence 45888888 22221 457999999999998874321 246999998875
No 154
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=95.61 E-value=0.0031 Score=50.11 Aligned_cols=46 Identities=24% Similarity=0.561 Sum_probs=35.7
Q ss_pred chhhhhhccccchhcc-CCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 236 DTCAVCLERACTVAAE-GCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 236 ~~C~vcle~~~~va~~-~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
..|.+|++........ +|||.+|..|+..+-... ..||+||..+..
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~------------~~CP~Cr~~~~~ 69 (99)
T 2y43_A 23 LRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYK------------TQCPTCCVTVTE 69 (99)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTC------------CBCTTTCCBCCG
T ss_pred CCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCC------------CCCCCCCCcCCh
Confidence 4589999887666555 899999999998875421 369999988764
No 155
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=95.60 E-value=0.0047 Score=51.33 Aligned_cols=72 Identities=21% Similarity=0.452 Sum_probs=48.1
Q ss_pred CCCchhhhhhccccch-------hccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCCCCcccC
Q 014068 233 DDADTCAVCLERACTV-------AAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGSPVKDI 305 (431)
Q Consensus 233 ~~~~~C~vcle~~~~v-------a~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~~~~~~~ 305 (431)
.+...|.||++..-.. ...+|||.+|..|+..+-... ..||+||..+..-. +..+
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~~~------l~~l 66 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA------------NTCPTCRKKINHKR------YHPI 66 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTC------------SBCTTTCCBCTTTC------EEEC
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhC------------CCCCCCCCcCcccc------cccc
Confidence 3456799999886554 788999999999998875332 26999998765322 2112
Q ss_pred CCCCcccccccccCCCC
Q 014068 306 KQPLSLGLCTPCMLHTR 322 (431)
Q Consensus 306 ~~~~~~~~~~~~~~~~~ 322 (431)
..+-....|+.|.....
T Consensus 67 ~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 67 YIGSGTVSCPICMDGYS 83 (133)
T ss_dssp BCSSSSCBCTTTCCBHH
T ss_pred ccCCCCCCCCCCCCccc
Confidence 22334455888875543
No 156
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=95.60 E-value=0.0046 Score=50.38 Aligned_cols=52 Identities=25% Similarity=0.639 Sum_probs=36.7
Q ss_pred Cchhhhhhccccc------------------hhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 235 ADTCAVCLERACT------------------VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 235 ~~~C~vcle~~~~------------------va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
.+.|.||++.... +...+|||.+|..|+..+-...+ ......||+||..+..
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~-------~~~~~~CP~CR~~~~~ 94 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGN-------KDGSLQCPSCKTIYGE 94 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTC-------CSSCCBCTTTCCBSSS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHccc-------CCCCCcCCCCCCccCC
Confidence 3679999988532 33788999999999988754332 1123469999987653
No 157
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=95.47 E-value=0.0014 Score=64.47 Aligned_cols=48 Identities=33% Similarity=0.706 Sum_probs=40.9
Q ss_pred CchhhhhhccccchhccCCChH-HHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecC
Q 014068 235 ADTCAVCLERACTVAAEGCRHE-LCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLP 298 (431)
Q Consensus 235 ~~~C~vcle~~~~va~~~CgH~-~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~ 298 (431)
...|.+|++........+|||. +|..|+..+ ..||+||..|.+.+++.
T Consensus 295 ~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~~----------------~~CP~CR~~i~~~~~i~ 343 (345)
T 3t6p_A 295 ERTCKVCMDKEVSVVFIPCGHLVVCQECAPSL----------------RKCPICRGIIKGTVRTF 343 (345)
T ss_dssp TCBCTTTSSSBCCEEEETTCCEEECTTTGGGC----------------SBCTTTCCBCCEEEECC
T ss_pred CCCCCccCCcCCceEEcCCCChhHhHHHHhcC----------------CcCCCCCCCccCeEEee
Confidence 3579999999999999999999 899888643 35999999999988764
No 158
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=95.37 E-value=0.0022 Score=52.51 Aligned_cols=47 Identities=30% Similarity=0.706 Sum_probs=37.1
Q ss_pred chhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 236 DTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 236 ~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
..|.+|++........+|||.+|..|+..+-.. +...||+||..+..
T Consensus 16 ~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-----------~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 16 CQCGICMEILVEPVTLPCNHTLCKPCFQSTVEK-----------ASLCCPFCRRRVSS 62 (115)
T ss_dssp HBCTTTCSBCSSCEECTTSCEECHHHHCCCCCT-----------TTSBCTTTCCBCHH
T ss_pred CCCccCCcccCceeEcCCCCHHhHHHHHHHHhH-----------CcCCCCCCCcccCc
Confidence 459999998877777799999999999755321 12569999999875
No 159
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=95.20 E-value=0.0046 Score=49.95 Aligned_cols=47 Identities=21% Similarity=0.518 Sum_probs=36.9
Q ss_pred Cchhhhhhccccchhcc-CCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 235 ADTCAVCLERACTVAAE-GCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 235 ~~~C~vcle~~~~va~~-~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
...|.+|++..-..... +|||.+|..|+..+-... ..||.||..+..
T Consensus 15 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~------------~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 15 HLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETS------------KYCPICDVQVHK 62 (108)
T ss_dssp GTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSC------------SBCTTTCCBSCS
T ss_pred cCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhC------------CcCcCCCccccc
Confidence 45699999987766665 999999999998875331 369999988764
No 160
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=95.14 E-value=0.0049 Score=53.80 Aligned_cols=48 Identities=27% Similarity=0.686 Sum_probs=37.1
Q ss_pred chhhhhhccccchhcc-CCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccc
Q 014068 236 DTCAVCLERACTVAAE-GCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSF 294 (431)
Q Consensus 236 ~~C~vcle~~~~va~~-~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~ 294 (431)
..|.+|++..-..... +|||.+|..|+..+-... ...||+||..|...
T Consensus 55 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~-----------~~~CP~Cr~~~~~~ 103 (165)
T 2ckl_B 55 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSG-----------NKECPTCRKKLVSK 103 (165)
T ss_dssp HBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTT-----------CCBCTTTCCBCCSG
T ss_pred CCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhC-----------cCCCCCCCCcCCCc
Confidence 4699999987776555 999999999998885421 24699999988643
No 161
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=95.06 E-value=0.0071 Score=49.73 Aligned_cols=58 Identities=17% Similarity=0.446 Sum_probs=42.1
Q ss_pred CCCCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCC
Q 014068 231 SSDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPG 299 (431)
Q Consensus 231 ~~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~ 299 (431)
.....-.|.+|++........+|||.+|..|+..+-...+ ..||+||..|..-...|.
T Consensus 14 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~-----------~~CP~Cr~~~~~~~~~~~ 71 (118)
T 3hct_A 14 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-----------HKCPVDNEILLENQLFPD 71 (118)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHC-----------SBCTTTCCBCCGGGCEEC
T ss_pred CCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCC-----------CCCCCCCCCcCHHhcccC
Confidence 3444567999999887777789999999999987754432 159999988775433333
No 162
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.66 E-value=0.0084 Score=45.85 Aligned_cols=46 Identities=33% Similarity=0.671 Sum_probs=31.5
Q ss_pred Cchhhhhhccccc---------------hhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 235 ADTCAVCLERACT---------------VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 235 ~~~C~vcle~~~~---------------va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
.+.|.||++.... +....|||.++..|+...-... ..||+||..+.
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~------------~~CP~CR~~~~ 75 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN------------NRCPLCQQDWV 75 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC------------CBCTTTCCBCC
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC------------CCCCCcCCCcc
Confidence 4557777765432 2344699999999998874332 15999998754
No 163
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.65 E-value=0.019 Score=40.28 Aligned_cols=47 Identities=28% Similarity=0.653 Sum_probs=35.3
Q ss_pred CCCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccc
Q 014068 232 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLC 287 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~C 287 (431)
......|.+|++........+|||.+|..|+..+-... .....||+|
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~---------~~~~~CP~C 58 (58)
T 2ecj_A 12 LQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL---------ERDFPCPVC 58 (58)
T ss_dssp SCCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSS---------CCSCCCSCC
T ss_pred cccCCCCccCCcccCccEeCCCCCccCHHHHHHHHHhc---------CCCCCCCCC
Confidence 34456799999988877788999999999999884321 123469988
No 164
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.52 E-value=0.015 Score=41.81 Aligned_cols=47 Identities=28% Similarity=0.742 Sum_probs=35.4
Q ss_pred CCCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccc
Q 014068 232 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLC 287 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~C 287 (431)
......|.||++........+|||.+|..|+..+-... .+...||+|
T Consensus 17 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~---------~~~~~CP~C 63 (63)
T 2ysj_A 17 LQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETS---------CGFFKCPLC 63 (63)
T ss_dssp CCCCCBCTTTCSBCSSCEECTTSSEECHHHHHHHHHHC---------SSCCCCSCC
T ss_pred CccCCCCCcCCchhCCeEEeCCCCcchHHHHHHHHHcC---------CCCCcCcCC
Confidence 34456799999988877778999999999998886431 122469988
No 165
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=94.34 E-value=0.012 Score=48.12 Aligned_cols=48 Identities=23% Similarity=0.508 Sum_probs=37.7
Q ss_pred chhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccc
Q 014068 236 DTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSF 294 (431)
Q Consensus 236 ~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~ 294 (431)
..|.+|++........+|||.+|..|+..+-... ...||+||..+..-
T Consensus 24 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~-----------~~~CP~Cr~~~~~~ 71 (116)
T 1rmd_A 24 ISCQICEHILADPVETSCKHLFCRICILRCLKVM-----------GSYCPSCRYPCFPT 71 (116)
T ss_dssp TBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHT-----------CSBCTTTCCBCCGG
T ss_pred CCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHC-----------cCcCCCCCCCCCHh
Confidence 4589999988777778999999999998775442 13599999987653
No 166
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=93.94 E-value=0.0051 Score=50.54 Aligned_cols=43 Identities=23% Similarity=0.542 Sum_probs=34.3
Q ss_pred chhhhhhccccchhcc-CCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 236 DTCAVCLERACTVAAE-GCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 236 ~~C~vcle~~~~va~~-~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
-.|.+|++..-..... +|||.+|..|+..+-. ..||+||..+.
T Consensus 23 ~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~--------------~~CP~Cr~~~~ 66 (117)
T 1jm7_B 23 LRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG--------------TGCPVCYTPAW 66 (117)
T ss_dssp TSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT--------------TBCSSSCCBCS
T ss_pred CCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc--------------CCCcCCCCcCc
Confidence 4588999888777777 9999999999876632 35999998874
No 167
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=93.37 E-value=0.011 Score=50.40 Aligned_cols=49 Identities=20% Similarity=0.430 Sum_probs=38.1
Q ss_pred CCCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccc
Q 014068 232 SDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI 291 (431)
Q Consensus 232 ~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I 291 (431)
....-.|.+|++.........|||.+|..|+..+-... ...||+||.+|
T Consensus 28 l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~-----------~~~CP~Cr~~~ 76 (141)
T 3knv_A 28 LEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSG-----------PQNCAACVHEG 76 (141)
T ss_dssp CCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHGGGS-----------CEECHHHHHTT
T ss_pred CCcCcCCCCCChhhcCcEECCCCCccCHHHHHHHHhcC-----------CCCCCCCCCcc
Confidence 34456799999987777778999999999999875321 13599999876
No 168
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=92.60 E-value=0.026 Score=46.67 Aligned_cols=49 Identities=22% Similarity=0.646 Sum_probs=36.9
Q ss_pred CCCchhhhhhccccch-------hccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccccc
Q 014068 233 DDADTCAVCLERACTV-------AAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVS 293 (431)
Q Consensus 233 ~~~~~C~vcle~~~~v-------a~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~ 293 (431)
.....|.+|++..-.. ...+|||.+|..|+..+-... ..||+||..|..
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA------------NTCPTCRKKINH 125 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHC------------SBCTTTCCBCCG
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcC------------CCCCCCCCcCCh
Confidence 3456699999876553 677999999999988775432 259999988763
No 169
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=92.02 E-value=0.036 Score=44.72 Aligned_cols=46 Identities=30% Similarity=0.510 Sum_probs=32.4
Q ss_pred CCchhhhhhcccc------------------chhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccc
Q 014068 234 DADTCAVCLERAC------------------TVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI 291 (431)
Q Consensus 234 ~~~~C~vcle~~~------------------~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I 291 (431)
..+.|.||++... .+...+|+|.++..|+...-... ..||+||...
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~------------~~CP~Cr~~~ 99 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR------------QVCPLDNREW 99 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTC------------SBCSSSCSBC
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcC------------CcCcCCCCcc
Confidence 3466888876532 24557899999888888874332 2599999873
No 170
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=91.83 E-value=0.049 Score=47.52 Aligned_cols=53 Identities=17% Similarity=0.440 Sum_probs=40.0
Q ss_pred CCCCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccc
Q 014068 231 SSDDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSF 294 (431)
Q Consensus 231 ~~~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~ 294 (431)
.....-.|.+|++........+|||.+|..|+..+-.... ..||.||..|..-
T Consensus 14 ~~~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~-----------~~CP~Cr~~~~~~ 66 (170)
T 3hcs_A 14 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-----------HKCPVDNEILLEN 66 (170)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHC-----------SBCTTTCCBCCGG
T ss_pred CCCCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHhCC-----------CCCCCCccCcchh
Confidence 3444567999999877767789999999999988754321 1599999887653
No 171
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=91.21 E-value=0.043 Score=45.11 Aligned_cols=46 Identities=30% Similarity=0.510 Sum_probs=0.9
Q ss_pred CCchhhhhhcccc------------------chhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccc
Q 014068 234 DADTCAVCLERAC------------------TVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI 291 (431)
Q Consensus 234 ~~~~C~vcle~~~------------------~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I 291 (431)
..+.|.||++... .+...+|+|.++..|+...-... ..||+||.+.
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~------------~~CP~Cr~~~ 110 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR------------QVCPLDNREW 110 (117)
T ss_dssp CC--------------------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcC------------CcCCCCCCee
Confidence 3478999987643 23445899999999987764332 2599999873
No 172
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=90.19 E-value=0.037 Score=43.35 Aligned_cols=53 Identities=21% Similarity=0.473 Sum_probs=34.9
Q ss_pred CCchhhhhhccccc---hhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcc--cccc
Q 014068 234 DADTCAVCLERACT---VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPL--CRHG 290 (431)
Q Consensus 234 ~~~~C~vcle~~~~---va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~--Cr~~ 290 (431)
..-.|.||++.... +...+|||.+|..|+...-.... .. +....+.||. |+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i-~~---g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLI-KE---GLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHH-HH---CSCCCEECSCTTCSSC
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHh-hc---CCcccccCccccCCCC
Confidence 34569999987433 23348999999999987754321 11 1123478999 9976
No 173
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=90.09 E-value=0.061 Score=41.41 Aligned_cols=56 Identities=9% Similarity=-0.131 Sum_probs=40.7
Q ss_pred CCCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCCC
Q 014068 233 DDADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGS 300 (431)
Q Consensus 233 ~~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~~ 300 (431)
...-.|.+|++-.-..+..+|||.+|-.|+...-... ..||+||..+..-..+|..
T Consensus 12 p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~~------------~~cP~~~~~l~~~~l~pn~ 67 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLNS------------PTDPFNRQMLTESMLEPVP 67 (85)
T ss_dssp CTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHC------------SBCTTTCCBCCGGGCEECH
T ss_pred chheECcccCchhcCCeECCCCCEECHHHHHHHHhcC------------CCCCCCcCCCChHhcchHH
Confidence 3445688999888887778899999888887775431 2599999887654444443
No 174
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=89.75 E-value=0.034 Score=52.18 Aligned_cols=58 Identities=9% Similarity=-0.074 Sum_probs=42.7
Q ss_pred CCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCCCCc
Q 014068 234 DADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGSPV 302 (431)
Q Consensus 234 ~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~~~~ 302 (431)
..-.|.+|++-.-..+..+|||.+|-.|+...-.... ..||+||..+..-..+|+..+
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~~-----------~~cP~~~~~~~~~~l~~n~~l 264 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG-----------HFNPVTRSPLTQEQLIPNLAM 264 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTC-----------SSCTTTCCCCCGGGCEECHHH
T ss_pred cccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHCC-----------CCCcCCCCCCchhcCcccHHH
Confidence 3456899999988888899999998888877643311 139999998876555565444
No 175
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=88.03 E-value=0.054 Score=43.16 Aligned_cols=54 Identities=11% Similarity=-0.116 Sum_probs=40.1
Q ss_pred CCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCC
Q 014068 234 DADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPG 299 (431)
Q Consensus 234 ~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~ 299 (431)
..-.|.+|++-.-..+..+|||.+|-.|+..+=.. ...||+||..+..-..+|.
T Consensus 28 ~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~------------~~~cP~~~~~l~~~~L~pn 81 (100)
T 2kre_A 28 DEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN------------SPTDPFNRQTLTESMLEPV 81 (100)
T ss_dssp TTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS------------CSBCSSSCCBCCTTSSEEC
T ss_pred HhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc------------CCCCCCCCCCCChhhceEC
Confidence 44568999998888888889999999998877432 1359999988765444444
No 176
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=86.74 E-value=0.097 Score=41.47 Aligned_cols=55 Identities=9% Similarity=-0.041 Sum_probs=40.8
Q ss_pred CCchhhhhhccccchhccCCC-hHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCCC
Q 014068 234 DADTCAVCLERACTVAAEGCR-HELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGS 300 (431)
Q Consensus 234 ~~~~C~vcle~~~~va~~~Cg-H~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~~ 300 (431)
..-.|.+|++-.-..+..+|| |.+|-.|+..+=.. ...||+||..+..-..+|..
T Consensus 21 ~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~------------~~~cP~~~~~l~~~~L~pn~ 76 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS------------DQTDPFNRSPLTMDQIRPNT 76 (98)
T ss_dssp TTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT------------SCBCTTTCSBCCTTTSEECH
T ss_pred HhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh------------CCCCCCCCCCCChhhceEcH
Confidence 345689999988888888999 99999998877432 12599999887654444543
No 177
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.21 E-value=0.22 Score=37.81 Aligned_cols=56 Identities=21% Similarity=0.436 Sum_probs=31.8
Q ss_pred CCCCchhhhhhccc--cchhccCCC-----hHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceec
Q 014068 232 SDDADTCAVCLERA--CTVAAEGCR-----HELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKL 297 (431)
Q Consensus 232 ~~~~~~C~vcle~~--~~va~~~Cg-----H~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l 297 (431)
....+.|.||++.. -.....+|+ |.+...|+..+-...+ ...||+||..+.--.++
T Consensus 12 ~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~----------~~~CplCr~~~~~~~~~ 74 (80)
T 2d8s_A 12 PSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSD----------TRCCELCKYEFIMETKL 74 (80)
T ss_dssp CTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHC----------CSBCSSSCCBCCCCCCS
T ss_pred CCCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCC----------CCCCCCCCCeeecCccc
Confidence 34557899999653 122346775 7774444443322211 13599999887644433
No 178
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=80.94 E-value=0.21 Score=44.08 Aligned_cols=58 Identities=10% Similarity=-0.039 Sum_probs=42.3
Q ss_pred CCchhhhhhccccchhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecCCCCc
Q 014068 234 DADTCAVCLERACTVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLPGSPV 302 (431)
Q Consensus 234 ~~~~C~vcle~~~~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~~~~~ 302 (431)
..-.|.+|++-.-..+..+|||.+|-.|+...-... + . .||+||..+..-..+|+..+
T Consensus 105 ~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~-------~---~-tcP~t~~~l~~~~L~pN~~L 162 (179)
T 2f42_A 105 DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRV-------G---H-FDPVTRSPLTQDQLIPNLAM 162 (179)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHT-------C---S-BCTTTCCBCCGGGCEECHHH
T ss_pred HhhcccCccccCCCCeECCCCCEECHHHHHHHHHhC-------C---C-CCCCCcCCCChhhCcchHHH
Confidence 445688999888777788999999888888775432 1 1 49999988776555565444
No 179
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.57 E-value=0.35 Score=37.75 Aligned_cols=63 Identities=16% Similarity=0.284 Sum_probs=41.1
Q ss_pred CCchhhhhhccccchhccC-CChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcc--cccc-cccceecCCCCc
Q 014068 234 DADTCAVCLERACTVAAEG-CRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPL--CRHG-IVSFTKLPGSPV 302 (431)
Q Consensus 234 ~~~~C~vcle~~~~va~~~-CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~--Cr~~-I~~~~~l~~~~~ 302 (431)
..-.|.+|++..-..+... |||.+|-.|+..+=.... +..+...||+ |+.. +..-..+|+..+
T Consensus 6 ~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~------~~~~~~~CP~tgc~~~~l~~~~L~pn~~L 72 (94)
T 2yu4_A 6 SGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQ------KRKKKAYCPQIGCSHTDIRKSDLIQDEAL 72 (94)
T ss_dssp SCCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHH------TTTCCBCCCSTTCCCCCBCGGGEEECHHH
T ss_pred cEeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHcc------CcCCCCCCCcCcCcccccCHhhCcCCHHH
Confidence 3456889998887777774 999998888777644321 0112356999 9976 554455555433
No 180
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=78.83 E-value=0.68 Score=36.53 Aligned_cols=40 Identities=20% Similarity=0.491 Sum_probs=31.0
Q ss_pred hhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccccceecC
Q 014068 248 VAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIVSFTKLP 298 (431)
Q Consensus 248 va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~~~~~l~ 298 (431)
....+|+|.+|..|+........ -.||.|+..|.++-..+
T Consensus 15 gRmIPCkHvFCydCa~~~~~~~~-----------k~Cp~C~~~V~rVe~~~ 54 (101)
T 3vk6_A 15 GRMIPCKHVFCYDCAILHEKKGD-----------KMCPGCSDPVQRIEQCT 54 (101)
T ss_dssp EEEETTCCEEEHHHHHHHHHTTC-----------CBCTTTCCBCSEEEEEE
T ss_pred eeeccccccHHHHHHHHHHhccC-----------CCCcCcCCeeeeeEEec
Confidence 46779999999999998754431 24999999999886543
No 181
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=78.32 E-value=0.6 Score=43.56 Aligned_cols=59 Identities=12% Similarity=0.127 Sum_probs=42.1
Q ss_pred CCCCCchhhhhhccccchhc-cCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcc--cccccccceecCC
Q 014068 231 SSDDADTCAVCLERACTVAA-EGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPL--CRHGIVSFTKLPG 299 (431)
Q Consensus 231 ~~~~~~~C~vcle~~~~va~-~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~--Cr~~I~~~~~l~~ 299 (431)
.....-.|-+|++..-..+. ..|||.+|-.|+...-... +...||. ||+.+..-...|.
T Consensus 177 ~~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~----------~~~~CPvtGCr~~l~~~dL~pN 238 (267)
T 3htk_C 177 GGKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGY----------TTRDCPQAACSQVVSMRDFVRD 238 (267)
T ss_dssp SSBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTC----------SCEECSGGGCSCEECGGGEEEC
T ss_pred CCceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhC----------CCCCCCcccccCcCchhhCCcC
Confidence 34444569999998877665 5999999999999885421 2246999 9987764444444
No 182
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.57 E-value=4.9 Score=29.79 Aligned_cols=51 Identities=20% Similarity=0.447 Sum_probs=31.3
Q ss_pred CCCCchhhhhhcccc-chhccCCChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCcccccccc
Q 014068 232 SDDADTCAVCLERAC-TVAAEGCRHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 232 ~~~~~~C~vcle~~~-~va~~~CgH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
....+.|.||.+... ...+..|+|.+=..|+...=.+.. ...||+||+...
T Consensus 12 ~~~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~----------~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 12 PDAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNA----------EPRCPHCNDYWP 63 (74)
T ss_dssp SSSSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCS----------SCCCTTTCSCCC
T ss_pred cCCCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcC----------CCCCCCCcCcCC
Confidence 345677888887653 234557888775555554422211 135999998765
No 183
>1p1p_A AA-conotoxin PIVA; neurotoxin, acetylcholine receptor binding, transcription regulation; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.3
Probab=55.71 E-value=8 Score=21.82 Aligned_cols=18 Identities=39% Similarity=1.119 Sum_probs=15.5
Q ss_pred cCCCCCCCcCCcccCCCC
Q 014068 353 CSPFPSVAIPLCTCNDGP 370 (431)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~ 370 (431)
|.++|.-+--+|.|.|-|
T Consensus 3 cg~ypnaachpc~c~~rp 20 (26)
T 1p1p_A 3 CGSYPNAACHPCSCKDRP 20 (26)
T ss_dssp STTSCCSSCCTTTSTTCC
T ss_pred cccCCCccccccccCCCC
Confidence 788999999999997766
No 184
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=55.11 E-value=3.3 Score=40.14 Aligned_cols=55 Identities=15% Similarity=0.390 Sum_probs=31.6
Q ss_pred CCCchhhhhhccccc------hhcc--CCChHH---HHHHHHHhhhcCCC-CCCCCCCCCCCCCcccccccc
Q 014068 233 DDADTCAVCLERACT------VAAE--GCRHEL---CVRCALYLCSTNNI-PSEMVGPPGSIPCPLCRHGIV 292 (431)
Q Consensus 233 ~~~~~C~vcle~~~~------va~~--~CgH~~---C~~cll~~ga~~n~-~~~~~~~p~~~~CP~Cr~~I~ 292 (431)
.+...|.||++.... ..+. .|||.+ |..-.++...+... -+.. .-.||+||++|.
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi-----~G~CPyCr~pIs 372 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVS-----FGQCPFCKAKLS 372 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCC-----EEECTTTCCEEE
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCcccccccc-----CCCCCCCCCcCC
Confidence 456679999976543 2333 677777 55555554332210 1111 125999999886
No 185
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=46.72 E-value=18 Score=25.36 Aligned_cols=46 Identities=22% Similarity=0.512 Sum_probs=27.9
Q ss_pred CCCchhhhhhccccchhccCC--------ChHHHHHHHHHhhhcCCCCCCCCCCCCCCCCccccccc
Q 014068 233 DDADTCAVCLERACTVAAEGC--------RHELCVRCALYLCSTNNIPSEMVGPPGSIPCPLCRHGI 291 (431)
Q Consensus 233 ~~~~~C~vcle~~~~va~~~C--------gH~~C~~cll~~ga~~n~~~~~~~~p~~~~CP~Cr~~I 291 (431)
.+...|.||++..-.....+| -|..|.+-.+.... ...||+|+...
T Consensus 4 ~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~-------------~~~C~~C~~~~ 57 (60)
T 1vyx_A 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISR-------------NTACQICGVVY 57 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHT-------------CSBCTTTCCBC
T ss_pred CCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCC-------------CCccCCCCCee
Confidence 345679999876433234554 45556666664421 14699999764
No 186
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=27.51 E-value=70 Score=31.58 Aligned_cols=48 Identities=13% Similarity=0.156 Sum_probs=38.8
Q ss_pred eccCCHHHHHHHHHcCCCCcccC-------------CCCCchHHHHHHHhCCHHHHHHHHh
Q 014068 4 CRYGHWEVVQTLLLFRCNVTRAD-------------YLSGRTALHFAAVNGHVRCIRLVVA 51 (431)
Q Consensus 4 a~~G~~evVk~LL~~gadi~~~d-------------~~~G~TpLh~Aa~~G~~eiv~~LL~ 51 (431)
+..|+...|+..+..|.|++.+- ...|.|-+|+|++..+.+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 45688899998888887764321 1369999999999999999999996
No 187
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.78 E-value=1.7e+02 Score=21.16 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=37.1
Q ss_pred CCCCCCcccccccccceecCCCCcccCCCCCcccccccccCCCCCCC------CCCCCCcchhhcccccc
Q 014068 279 PGSIPCPLCRHGIVSFTKLPGSPVKDIKQPLSLGLCTPCMLHTRDAE------CESPACAPEIRKNRVAL 342 (431)
Q Consensus 279 p~~~~CP~Cr~~I~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 342 (431)
.+...|+.|...|..-..|- +.+..|...--.|..|...-.+.. ...+.|+..+.+...++
T Consensus 13 ~~~~~C~~C~~~I~~~e~v~---a~~~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~~~~~ 79 (82)
T 2co8_A 13 GAGDLCALCGEHLYVLERLC---VNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQTDSGP 79 (82)
T ss_dssp CSSCBCSSSCCBCCTTTBCC---BTTBCCBTTTCBCSSSCCBCCTTSEECCTTTCCCEETTTCCCCCCCC
T ss_pred CCCCCCcccCCCcccceEEE---ECCCeeCCCcCEEcCCCCCcCCCceeEeCcCCEEEChHHHHhhhcCC
Confidence 34567999999996322221 234567777777888875443311 23456788876654433
No 188
>1jlp_A PSI-conotoxin PIIIF; multiple disulfide bonds, amidated C-terminus; HET: HYP; NMR {Synthetic} SCOP: j.30.1.4
Probab=23.37 E-value=25 Score=19.67 Aligned_cols=7 Identities=57% Similarity=1.682 Sum_probs=5.8
Q ss_pred ccCCCCC
Q 014068 352 TCSPFPS 358 (431)
Q Consensus 352 ~~~~~~~ 358 (431)
||.|||-
T Consensus 9 scrpfpg 15 (26)
T 1jlp_A 9 SCRPFPG 15 (26)
T ss_dssp SCCCCTT
T ss_pred cccCCCc
Confidence 7999994
No 189
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=21.93 E-value=2e+02 Score=28.44 Aligned_cols=56 Identities=13% Similarity=0.165 Sum_probs=42.3
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCccccc-------CCCccccCCCCCcHHHHHHhcCCHHHHHHHHH
Q 014068 102 MAALNGYFDCVQLLLDLHANVSAVTFH-------YGTSMDLIGAGSTPLHFAACGGNLKCCQVLLS 160 (431)
Q Consensus 102 ~Aa~~g~~e~VklLL~~Gadvn~~d~~-------~~~~~~~~~~G~TpLh~Aa~~g~~eivklLL~ 160 (431)
+.+..|+...|+..+..|.|++..-.. .... ..-|.|.+|+|+...+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~a---f~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSA---FDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTT---CCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcc---cccCchhhhhhhhhhhhhHHHHhhh
Confidence 345678999999999888887654321 1111 2359999999999999999999997
Done!