Query 014070
Match_columns 431
No_of_seqs 123 out of 1365
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 01:34:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014070.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014070hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK00013 groEL chaperonin GroE 100.0 3.4E-90 7.3E-95 731.0 47.8 419 12-431 53-517 (542)
2 PRK12849 groEL chaperonin GroE 100.0 3.7E-90 8E-95 730.7 47.1 419 12-431 53-516 (542)
3 PRK12852 groEL chaperonin GroE 100.0 5.5E-90 1.2E-94 731.3 48.3 420 12-431 54-518 (545)
4 PRK14104 chaperonin GroEL; Pro 100.0 1.1E-89 2.3E-94 727.7 46.7 420 12-431 54-518 (546)
5 cd03344 GroEL GroEL_like type 100.0 4.1E-89 9E-94 720.5 48.3 419 12-431 51-514 (520)
6 TIGR02348 GroEL chaperonin Gro 100.0 4.6E-89 1E-93 721.2 47.7 418 12-431 52-515 (524)
7 PTZ00114 Heat shock protein 60 100.0 4.5E-89 9.8E-94 725.2 47.7 420 12-431 65-533 (555)
8 PRK12851 groEL chaperonin GroE 100.0 5.7E-89 1.2E-93 722.0 47.0 419 12-431 54-517 (541)
9 PRK12850 groEL chaperonin GroE 100.0 6.1E-89 1.3E-93 722.2 47.0 419 12-431 54-517 (544)
10 CHL00093 groEL chaperonin GroE 100.0 2.8E-88 6E-93 716.0 46.1 418 12-431 53-518 (529)
11 PLN03167 Chaperonin-60 beta su 100.0 3.1E-87 6.8E-92 713.4 44.9 419 12-431 109-574 (600)
12 KOG0356 Mitochondrial chaperon 100.0 5.2E-78 1.1E-82 608.7 33.7 408 20-430 79-529 (550)
13 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 5E-74 1.1E-78 602.3 36.1 367 12-431 55-476 (484)
14 TIGR02339 thermosome_arch ther 100.0 7.8E-73 1.7E-77 598.6 40.3 373 12-431 59-513 (519)
15 cd03343 cpn60 cpn60 chaperonin 100.0 1.4E-72 3E-77 596.8 41.2 373 12-431 58-510 (517)
16 TIGR02347 chap_CCT_zeta T-comp 100.0 9.8E-73 2.1E-77 597.7 39.9 373 12-431 59-519 (531)
17 TIGR02342 chap_CCT_delta T-com 100.0 1.1E-72 2.3E-77 596.9 38.7 379 12-431 52-510 (517)
18 cd03335 TCP1_alpha TCP-1 (CTT 100.0 2.5E-72 5.4E-77 595.6 40.2 378 12-431 51-519 (527)
19 cd03338 TCP1_delta TCP-1 (CTT 100.0 3.3E-72 7.1E-77 593.5 38.9 379 12-431 51-509 (515)
20 cd03336 TCP1_beta TCP-1 (CTT o 100.0 1.9E-71 4.1E-76 587.4 40.9 373 12-431 58-507 (517)
21 TIGR02340 chap_CCT_alpha T-com 100.0 1.7E-71 3.7E-76 590.1 39.9 378 12-431 55-523 (536)
22 TIGR02344 chap_CCT_gamma T-com 100.0 4.7E-71 1E-75 585.8 40.9 373 12-431 59-515 (525)
23 COG0459 GroL Chaperonin GroEL 100.0 3.2E-73 7E-78 595.6 24.1 400 14-431 56-507 (524)
24 PTZ00212 T-complex protein 1 s 100.0 3.4E-71 7.4E-76 587.1 39.8 373 12-431 70-519 (533)
25 cd03339 TCP1_epsilon TCP-1 (CT 100.0 4.7E-71 1E-75 585.7 40.5 373 12-431 66-521 (526)
26 TIGR02343 chap_CCT_epsi T-comp 100.0 1E-70 2.2E-75 583.1 39.3 373 12-431 70-525 (532)
27 cd03340 TCP1_eta TCP-1 (CTT or 100.0 1.6E-70 3.6E-75 581.3 40.7 373 12-431 59-513 (522)
28 TIGR02346 chap_CCT_theta T-com 100.0 9.5E-71 2.1E-75 583.2 38.7 374 12-431 61-513 (531)
29 TIGR02341 chap_CCT_beta T-comp 100.0 2.3E-70 4.9E-75 578.9 40.7 373 12-431 59-508 (519)
30 TIGR02345 chap_CCT_eta T-compl 100.0 9E-70 2E-74 575.2 39.9 373 12-431 60-513 (522)
31 cd03341 TCP1_theta TCP-1 (CTT 100.0 7E-70 1.5E-74 569.6 38.4 360 12-431 51-465 (472)
32 cd03337 TCP1_gamma TCP-1 (CTT 100.0 5.4E-70 1.2E-74 571.5 36.9 356 12-431 59-474 (480)
33 KOG0361 Chaperonin complex com 100.0 3.9E-70 8.3E-75 529.3 26.0 368 17-431 68-516 (543)
34 cd00309 chaperonin_type_I_II c 100.0 1.2E-67 2.7E-72 552.3 40.1 356 12-431 51-459 (464)
35 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 1.4E-63 2.9E-68 523.6 36.9 373 12-431 32-477 (485)
36 KOG0363 Chaperonin complex com 100.0 3.8E-64 8.2E-69 484.8 28.6 372 13-431 64-512 (527)
37 KOG0358 Chaperonin complex com 100.0 1.1E-62 2.3E-67 476.7 25.3 378 13-431 70-527 (534)
38 KOG0364 Chaperonin complex com 100.0 6.7E-56 1.5E-60 436.0 22.7 372 13-431 63-514 (527)
39 KOG0360 Chaperonin complex com 100.0 1.9E-55 4.2E-60 436.3 23.0 375 14-431 64-529 (545)
40 KOG0357 Chaperonin complex com 100.0 1.8E-54 3.9E-59 414.3 16.3 306 21-431 71-389 (400)
41 KOG0362 Chaperonin complex com 100.0 1.4E-51 3.1E-56 411.2 30.8 373 13-431 70-514 (537)
42 KOG0359 Chaperonin complex com 100.0 3.6E-52 7.8E-57 409.1 24.2 371 11-429 59-506 (520)
43 cd03333 chaperonin_like chaper 99.9 5.7E-22 1.2E-26 186.5 17.9 165 95-323 2-209 (209)
44 cd03334 Fab1_TCP TCP-1 like do 99.8 3.6E-20 7.7E-25 180.1 18.5 147 132-324 83-254 (261)
45 KOG0230 Phosphatidylinositol-4 97.9 8.7E-05 1.9E-09 84.7 12.3 155 132-333 397-577 (1598)
46 COG0459 GroL Chaperonin GroEL 91.8 3.1 6.7E-05 44.8 13.6 103 154-272 262-385 (524)
47 TIGR02345 chap_CCT_eta T-compl 42.0 11 0.00023 40.6 0.7 59 162-221 247-314 (522)
48 PRK13600 putative ribosomal pr 41.0 97 0.0021 24.9 5.9 53 155-217 22-74 (84)
49 smart00574 POX domain associat 39.6 78 0.0017 27.9 5.5 44 301-344 84-128 (140)
50 PRK11058 GTPase HflX; Provisio 36.2 74 0.0016 33.3 5.9 114 203-320 26-177 (426)
51 PF07818 HCNGP: HCNGP-like pro 32.7 61 0.0013 26.7 3.7 55 364-426 30-85 (96)
52 TIGR03156 GTP_HflX GTP-binding 27.9 1.9E+02 0.0042 29.3 7.2 57 203-260 18-81 (351)
53 PF08406 CbbQ_C: CbbQ/NirQ/Nor 25.3 2.4E+02 0.0053 22.6 5.9 51 15-67 6-57 (86)
54 PLN02512 acetylglutamate kinas 24.6 1.5E+02 0.0033 29.5 5.7 47 283-331 42-90 (309)
55 PF07526 POX: Associated with 21.7 1.1E+02 0.0024 27.0 3.6 44 301-344 84-128 (140)
56 COG3962 Acetolactate synthase 20.7 47 0.001 35.2 1.1 39 307-345 216-254 (617)
57 KOG2144 Tyrosyl-tRNA synthetas 20.6 2E+02 0.0044 28.7 5.3 35 54-88 295-331 (360)
No 1
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=3.4e-90 Score=730.99 Aligned_cols=419 Identities=39% Similarity=0.547 Sum_probs=401.7
Q ss_pred hHHhhhcCCcch----HHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPV----CCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~----~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+-+++++..||| +++|++++|++||+++||||||+++|+++||++++++++ |+||+.|++||++|.+.++++|++
T Consensus 53 ~tIlk~i~~~hp~~~~~akll~e~a~~qd~e~GDGTTtvviLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~ 132 (542)
T PRK00013 53 VTVAKEIELEDPFENMGAQLVKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAAVEELKK 132 (542)
T ss_pred HHHHHHccCCCchhhHHHHHHHHHHHhcCcccCCccchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999 799999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE--------------------------E---------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------F--------- 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i--------------------------f--------- 131 (431)
+++|+++.+++.++|++|+++++.+++++++|+..++.+|.|.| |
T Consensus 133 ~a~~~~~~~~l~~va~ts~~~~~~ls~lv~~Av~~v~~~g~i~i~~~~~~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~ 212 (542)
T PRK00013 133 ISKPVEDKEEIAQVATISANGDEEIGKLIAEAMEKVGKEGVITVEESKGFETELEVVEGMQFDRGYLSPYFVTDPEKMEA 212 (542)
T ss_pred hccCCCCHHHHHHHHHhcccchHHHHHHHHHHHHHhCcCCcEEEEEcCCCCceEEEEEeEEecCCcccccccccccCCeE
Confidence 99999888899999999998899999999999999987765554 1
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|++|++++++.++++++.++|+|+||++++|+++++++|+.|+++|+++|++||+|+||++|+++|+|||
T Consensus 213 ~~~n~~Ilv~d~~i~~~~~l~~~l~~i~~~g~~lvi~~~~I~~~al~~l~~~~~~g~~~i~avr~~~~~~~r~~~l~~ia 292 (542)
T PRK00013 213 ELENPYILITDKKISNIQDLLPVLEQVAQSGKPLLIIAEDVEGEALATLVVNKLRGTLKVVAVKAPGFGDRRKAMLEDIA 292 (542)
T ss_pred EEecCEEEEEcCccCCHHHHHHHHHHHHHhCCCEEEECCCCcHHHHHHHHHcCCcccceEEEEecCCcccchhhhHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||++++++.|.+++++++++||+|+.|++++++++++++|++++.+..|+++|+++++++.+ ++|+||+++|+
T Consensus 293 ~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~ 372 (542)
T PRK00013 293 ILTGGTVISEELGLKLEDATLEDLGQAKKVVVTKDNTTIVDGAGDKEAIKARVAQIKAQIEETTSDYDREKLQERLAKLA 372 (542)
T ss_pred HHcCCEEecccccCCcccCCHHHCCeeeEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHhc
Confidence 99999999988888899999999999999999999999999999999999999999999999876 99999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAY 366 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~ 366 (431)
|+++||+|||+|+++++|+||+++||+|++|+++++|+|||||++|+++|.+|+++ .. ++++|+|+++|++||+.|||
T Consensus 373 g~~~tI~irG~t~~~l~E~er~i~Dal~~vk~al~~g~VpGGGa~e~~~s~~L~~~-~~~~~~~~~~i~~~a~Al~~ip~ 451 (542)
T PRK00013 373 GGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIVPGGGVALLRAAPALEAL-KGLNGDEATGINIVLRALEAPLR 451 (542)
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcCcccCcHHHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 45 89999999999999999999
Q ss_pred HHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 367 LIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 367 ~La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
+||+|||+|+.++ .+|++..++++|||+.+|+++||++.|||||+.||.++|++|+++|++||+|
T Consensus 452 ~La~NaG~d~~~vl~~l~~~~~~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~i 517 (542)
T PRK00013 452 QIAENAGLEGSVVVEKVKNGKGKGYGYNAATGEYVDMIEAGIIDPTKVTRSALQNAASVAGLLLTT 517 (542)
T ss_pred HHHHHcCCCHHHHHHHHHhhcCCCEeEeCCCCceeehhhccCeecHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 9998755567999999999999999999999999999999999999999986
No 2
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=3.7e-90 Score=730.68 Aligned_cols=419 Identities=40% Similarity=0.567 Sum_probs=400.9
Q ss_pred hHHhhhcCCcch----HHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPV----CCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~----~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+-+++++..||| +|+|++++|++||+++||||||+++||++||++++++++ |+||+.|++||++|.+.++++|++
T Consensus 53 aTIlk~i~~~hp~~~~~a~ll~~~a~~qd~e~GDGTTtvviLageLL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~ 132 (542)
T PRK12849 53 VSIAKEIELEDPFENLGAQLVKEVASKTNDVAGDGTTTATVLAQALVQEGLKNVAAGANPMDLKRGIDKAVEAVVEELKA 132 (542)
T ss_pred HHHHHHcccCCccHhHHHHHHHHHHHhcCCccCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 346788999999 999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE--------------------------E---------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------F--------- 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i--------------------------f--------- 131 (431)
+++|+++.+++.++|.+|+++++.+++++++|+.+++.+|.+++ |
T Consensus 133 ~s~~~~~~~~l~~va~ts~~~~~~l~~lv~~Av~~v~~~g~i~i~~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~ 212 (542)
T PRK12849 133 LARPVSGSEEIAQVATISANGDEEIGELIAEAMEKVGKDGVITVEESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEA 212 (542)
T ss_pred hccCCCCHHHHHHHHHHhcCChHHHHHHHHHHHHHhccCCcEeEEeCCCcceeEEEEEeEEEecCcccCcccccccCceE
Confidence 99999888889999999999899999999999999987665443 1
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+|+++|++|++++++.++++++.++|+|+||++++|+++++++|..|+++|.++|++||+|+++++|+++++|||
T Consensus 213 ~~~n~~Ili~d~~i~~~~~~~~~l~~i~~~~~~lvI~~~~I~~~al~~l~~~~~~~~~~i~avr~~~~~~~r~~~l~~ia 292 (542)
T PRK12849 213 VLEDPLILLTDKKISSLQDLLPLLEKVAQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIA 292 (542)
T ss_pred EeeCcEEEeecCCcCCHHHHHHHHHHHHHhCCCEEEECCCCcHHHHHHHHHhhhhccccEEEEeCCCccchhHhHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||++++++.+.+++++++++||+|+.|++++++|+++++|+++++++.|+++|+++++++++ ++|+||+++|+
T Consensus 293 ~~tGa~~v~~~~~~~~~~~~~~~LG~~~~v~~~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~ 372 (542)
T PRK12849 293 ILTGGTVISEDLGLKLEEVTLDDLGRAKRVTITKDNTTIVDGAGDKEAIEARVAQIRRQIEETTSDYDREKLQERLAKLA 372 (542)
T ss_pred HHhCCEEecccccCCcccCCHHHCceeeEEEEeeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhc
Confidence 99999999988888899999999999999999999999999999999999999999999999876 99999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYL 367 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~AL~~ip~~ 367 (431)
|+++||+|||+|+.+++|+||+++||+|++|+++++|||||||++|+++|.+|++++..++++|+|+++|++||+.|||+
T Consensus 373 ~~~~TI~irG~t~~~l~E~er~i~DAl~~~~~a~~~g~VpGGGa~e~~ls~~L~~~~~~~g~~~~~i~~~a~Al~~ip~~ 452 (542)
T PRK12849 373 GGVAVIKVGAATEVELKERKDRVEDALNATRAAVEEGIVPGGGVALLRAAKALDELAGLNGDQAAGVEIVRRALEAPLRQ 452 (542)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcCeecCCCHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999833999999999999999999999
Q ss_pred HHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 368 IASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 368 La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+|||+|+.++ .+|++.. +++|||+.+|+++||++.|||||+.||.++|++|+++|++||+|
T Consensus 453 La~NaG~d~~~vi~~L~~~~-~~~G~d~~~g~~~d~~~~GV~Dp~~vk~~al~~A~e~A~~iL~i 516 (542)
T PRK12849 453 IAENAGLDGSVVVAKVLELE-DGFGFNAATGEYGDLIAAGIIDPVKVTRSALQNAASVAGLLLTT 516 (542)
T ss_pred HHHHCCCCHHHHHHHHHhhC-CCcceeCCCCccccHHhccCccCHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999 9998754 57999999999999999999999999999999999999999986
No 3
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=5.5e-90 Score=731.29 Aligned_cols=420 Identities=37% Similarity=0.558 Sum_probs=401.3
Q ss_pred hHHhhhcCC----cchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGT----QPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~----~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+-+++++-. |||+++|++++|.+||+++||||||+++||++||+++.++++ |+||+.|++||++|.+.++++|++
T Consensus 54 ~TIlk~i~~~~~~~~p~akll~e~a~~q~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~ 133 (545)
T PRK12852 54 VTVAKEIELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVKDIEK 133 (545)
T ss_pred HHHHHHccCCCcccChHHHHHHHHHhhcCceecCCcchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456778887 599999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE-----------------E------------------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI-----------------F------------------ 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i-----------------f------------------ 131 (431)
+++|+++.+++.++|++|+++++.+++++++|+.+++++|.+++ |
T Consensus 134 ~s~~v~~~~~l~~va~~s~~~~~~l~~li~eA~~~vg~~g~i~v~~g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~ 213 (545)
T PRK12852 134 RAKPVASSAEIAQVGTISANGDAAIGKMIAQAMQKVGNEGVITVEENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTV 213 (545)
T ss_pred hcccCCCHHHHHHHHhhhcCChHHHHHHHHHHHHHhccCCceeeecCCCcceEEEEEEeEEecCCccCCccccccccceE
Confidence 99999877889999999998899999999999999988776544 1
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
.++||+||++|++|++++++.|+++.+.++|+|+||++++|+++++++|+.|+.+|.++|++||+|+||++|+++|+|||
T Consensus 214 ~l~n~~Ili~d~~i~~~~~i~~~l~~i~~~g~~lvI~~~~i~~~al~~l~~nk~~~~~~i~av~~~~~~~~r~~~l~~ia 293 (545)
T PRK12852 214 ELDDAYILLHEKKLSGLQAMLPVLEAVVQSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIA 293 (545)
T ss_pred EecCceEEEecCccCCHHHHHHHHHHHHHhCcCEEEECCCCcHHHHHHHHHhcccccceEEEEecCCcccchHhHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||++++++.|.+++++++++||+|+.|+++++++++++++++++.++.|+++++.+++++.+ ++|+||+++|+
T Consensus 294 ~~tGa~~i~~~~~~~l~~~~~~~lG~~~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~R~~~l~ 373 (545)
T PRK12852 294 ILTGGQLISEDLGIKLENVTLKMLGRAKKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLA 373 (545)
T ss_pred HhcCCEEEecCcCCCcCCCCHHHCCCCcEEEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Confidence 99999999988788899999999999999999999999999999999999999999999999776 89999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYL 367 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~AL~~ip~~ 367 (431)
|+++||+|||+|+.+++|+||+++||+|++|+++++|||||||++|++++.+|++++..++++|+|+++|++||+.|||+
T Consensus 374 ~~~~tI~irG~t~~~l~E~er~i~DAl~a~~~a~~~g~VpGGGa~e~~~s~~L~~~~~~~~~~q~~i~~~a~AL~~ip~~ 453 (545)
T PRK12852 374 GGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRINNDNADVQAGINIVLKALEAPIRQ 453 (545)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCchHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999866889999999999999999999
Q ss_pred HHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 368 IASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 368 La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+|||+|+.++ .+|++..++++|||+.+|+++||++.|||||+.||.++|++|+++|++||+|
T Consensus 454 La~NaG~d~~~vl~~l~~~~~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~i 518 (545)
T PRK12852 454 IAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTT 518 (545)
T ss_pred HHHHcCCCHHHHHHHHHhhcCCCeeEeCcCCCcccHHhCcCCcChHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999 9998766678999999999999999999999999999999999999999986
No 4
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=1.1e-89 Score=727.70 Aligned_cols=420 Identities=38% Similarity=0.565 Sum_probs=402.5
Q ss_pred hHHhhhcCCc----chHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQ----PVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~----~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+-+++++..+ ||+++|++++|.+||+++||||||+|+||++||+++.++++ |+||+.|++||++|.+.++++|++
T Consensus 54 ~tIlk~i~~~d~~~~pgakll~e~a~~qd~e~GDGTTTvvvLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~ 133 (546)
T PRK14104 54 VTVAKEIELEDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVK 133 (546)
T ss_pred HHHHHHhcCCCcccChHHHHHHHHHHhhcccccCcccHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 4567888888 99999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE--------------------------E---------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------F--------- 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i--------------------------f--------- 131 (431)
+++|+++.+++.++|++|+++++.+++++++|+.++|.+|.|++ |
T Consensus 134 ~a~~v~~~~~l~~va~~s~~~d~~i~~lv~~Av~~vg~~g~i~v~~~~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~ 213 (546)
T PRK14104 134 NSKKVTSNDEIAQVGTISANGDAEIGKFLADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRV 213 (546)
T ss_pred hcccCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHhccCCceeeEecccccceEEEEEEEEEeCCCCCcchhcCcccCce
Confidence 99999877789999999999999999999999999998876655 1
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|.++++++++.|+++.+.++|+||||++++|+++++++|..|++++.++|++||+|+||++|+++|+|||
T Consensus 214 ~~~~~~Ilv~d~~i~~~~~i~~~l~~i~~~g~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~av~~~~~g~~r~~~l~~ia 293 (546)
T PRK14104 214 EMDDAYILINEKKLSSLNELLPLLEAVVQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIA 293 (546)
T ss_pred eeeCcEEEEehhhhcCHHHHHHHHHHHHHhCcCEEEECCCCcHHHHHHHHhCcccceeeEEEEeccCCCcchHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||++++++.+++++++++++||+|++|++++++++++++|++++.+..|+++|+++++++++ ++|+||+++|+
T Consensus 294 ~~tG~~~i~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~ 373 (546)
T PRK14104 294 ILTGGQAISEDLGIKLENVTLQMLGRAKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLA 373 (546)
T ss_pred HHhCCEEEecCCCCCcCcCCHHHCCceeEEEEcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhc
Confidence 99999999998888999999999999999999999999999999999999999999999999887 99999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYL 367 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~AL~~ip~~ 367 (431)
|+++||+|||+|+++++|++|+++||+|++++++++|||||||++|++++..|+++...++++|+|+++|++||+.||++
T Consensus 374 ~~~atI~irG~t~~~l~e~~r~i~Dal~a~~~ai~~g~VpGGGa~e~~~s~~L~~~~~~~~~~~~~i~~~a~Al~~ip~~ 453 (546)
T PRK14104 374 GGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKGIKTKNDDQKTGVEIVRKALSAPARQ 453 (546)
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcCcCcCchHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHhhHHH
Confidence 99999999999999999999999999999999999999999999999999999988544899999999999999999999
Q ss_pred HHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 368 IASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 368 La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+|||+|+.++ .+|++.+++++|||+.+|+++||++.|||||+.||.++|++|+++|++||+|
T Consensus 454 La~NaG~d~~~v~~~l~~~~~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~a~~iL~i 518 (546)
T PRK14104 454 IAINAGEDGSVIVGKILEKEQYSYGFDSQTGEYGNLVSKGIIDPTKVVRTAIQNAASVAALLITT 518 (546)
T ss_pred HHHhCCCCHHHHHHHHHhcCCCcEeEeCCCCceeehHhcCCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 9998755667999999999999999999999999999999999999999985
No 5
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=4.1e-89 Score=720.50 Aligned_cols=419 Identities=42% Similarity=0.599 Sum_probs=402.1
Q ss_pred hHHhhhcCCcch----HHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPV----CCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~----~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+.+++++..||| +++|++++|++||+++||||||+++||++||++++++++ |+||..|++||+.|.+.++++|++
T Consensus 51 ~tIlk~i~~~hp~~~~~a~ll~~~a~~qd~e~GDGTTtvviLa~~Ll~~~~~li~~gi~p~~I~~G~~~a~~~~~~~L~~ 130 (520)
T cd03344 51 VTVAKEIELEDPFENMGAQLVKEVASKTNDVAGDGTTTATVLARAIIKEGLKAVAAGANPMDLKRGIEKAVEAVVEELKK 130 (520)
T ss_pred HHHHHHcccCCcchhHHHHHHHHHHhhhccccCCCcchHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 578899999999 999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE--------------------------E---------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------F--------- 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i--------------------------f--------- 131 (431)
+++|+++.+++.++|.+|+++++.+++++++|+..++.+|.|.+ |
T Consensus 131 ~~~~i~~~~~l~~va~ts~~~~~~l~~lv~~A~~~v~~~~~i~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~ 210 (520)
T cd03344 131 LSKPVKTKEEIAQVATISANGDEEIGELIAEAMEKVGKDGVITVEEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEV 210 (520)
T ss_pred hccCCCCHHHHHHHHHHhcCChHHHHHHHHHHHHHhccCCcEEEEeCCCcceeEEEEeeEEecCCCCCCccccCcccCeE
Confidence 99999888899999999999999999999999999987665443 1
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+|+++|+++++++++.++++.+.++|+|++|++++|+++++++|..|++++.+++++||.|++|++++++++|||
T Consensus 211 ~~~n~~Ili~d~~l~~~~~l~~~l~~i~~~~~~lvi~~~~i~~~al~~l~~~~i~~~~~v~avk~~~~~~~~~~~l~~la 290 (520)
T cd03344 211 ELENPYILLTDKKISSIQELLPILELVAKAGRPLLIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKAMLEDIA 290 (520)
T ss_pred EeeCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCccCceEEEEeCCCCCcccHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||++++++++.+++++++++||+|+.|++++++++++++|+++++++.|+++++++++++++ ++|+||+++|+
T Consensus 291 ~~tGa~~~~~~~~~~~~~~~~~~LG~~~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~ 370 (520)
T cd03344 291 ILTGGTVISEELGLKLEDVTLEDLGRAKKVVVTKDDTTIIGGAGDKAAIKARIAQIRKQIEETTSDYDKEKLQERLAKLS 370 (520)
T ss_pred HHhCCEEecccccCCcccCCHHHCCcceEEEEeeceEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhc
Confidence 99999999988777899999999999999999999999999999999999999999999999876 99999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYL 367 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~AL~~ip~~ 367 (431)
|+++||+|||+|+.+++|++|+++||+|++|+++++|+|||||++|++++++|++++..++++|+|+++|++||+.||++
T Consensus 371 ~~~~TI~irG~t~~~l~E~~r~i~Dal~~~k~a~~~g~VpGGGa~e~~~s~~L~~~~~~~~~~~~~~~~~a~Al~~ip~~ 450 (520)
T cd03344 371 GGVAVIKVGGATEVELKEKKDRVEDALNATRAAVEEGIVPGGGVALLRASPALDKLKALNGDEKLGIEIVRRALEAPLRQ 450 (520)
T ss_pred CCeEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCcHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998767899999999999999999999
Q ss_pred HHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 368 IASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 368 La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+|||+|+.++ .+|++... ++|||+.+|+++||++.|||||+.||.+++++|+++|++||+|
T Consensus 451 La~NaG~d~~~vi~~l~~~~~-~~G~d~~~g~~~d~~~~gV~Dp~~vk~~~l~~A~~~a~~iL~i 514 (520)
T cd03344 451 IAENAGVDGSVVVEKVLESPD-GFGYDAATGEYVDMIEAGIIDPTKVVRSALQNAASVASLLLTT 514 (520)
T ss_pred HHHhcCCCHHHHHHHHHhhcC-CEeEECCCCcccchHhccCeecHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999 99987654 7999999999999999999999999999999999999999986
No 6
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=4.6e-89 Score=721.17 Aligned_cols=418 Identities=38% Similarity=0.547 Sum_probs=399.8
Q ss_pred hHHhhhcCCcch----HHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPV----CCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~----~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+-+++++..||| +++|++++|++||+++||||||+++||++||+++.++++ |+||+.|++||++|.+.++++|++
T Consensus 52 ~tIlk~i~~~hp~~~~~akll~~~a~~qd~e~GDGTTtvviLa~~Ll~~a~~li~~GihP~~Ii~G~~~A~~~~l~~L~~ 131 (524)
T TIGR02348 52 VTVAKEIELEDKFENMGAQLVKEVASKTNDVAGDGTTTATVLAQAIVKEGLKNVAAGANPIELKRGIEKAVEAAVEELKK 131 (524)
T ss_pred HHHHHHccCCChhhHHHHHHHHHHHHccCceeCCCcchHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999 999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE-----------------E------------------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI-----------------F------------------ 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i-----------------f------------------ 131 (431)
+++|+++.+++.++|.+|+++++.+++++++|+..++++|.|+| |
T Consensus 132 ~s~~~~~~~~l~~va~ts~~~~~~l~~lv~~A~~~v~~~~~i~v~~g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~ 211 (524)
T TIGR02348 132 LSKPVKGKKEIAQVATISANNDEEIGSLIAEAMEKVGKDGVITVEESKSLETELEVVEGMQFDRGYISPYFVTDAEKMEV 211 (524)
T ss_pred hccCCCCHHHHHHHHHHhccChHHHHHHHHHHHHHhCcCCcEeeecCCCccccEEEEEeEEEcCCCCCcccccCccCCeE
Confidence 99999888899999999999899999999999999988776555 1
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
.++||+||++|++|++++++.++++.+.++|+|+||++++|+++++++|+.|+++|++++++||+|+||++|+++++|||
T Consensus 212 ~~~n~~Ili~d~~i~~~~~i~~~l~~i~~~g~~lvi~~~~i~~~al~~l~~n~~~~~~~i~avr~~~~~~~r~~~l~~ia 291 (524)
T TIGR02348 212 ELENPYILITDKKISNIKDLLPLLEKVAQSGKPLLIIAEDVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLEDIA 291 (524)
T ss_pred EeeCceeeeccCCcCCHHHHHHHHHHHHHhCcCEEEECCCCChHHHHHHHHhhcccccceEEEECCCccchhhhhHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||++++.+.|++++++++++||+|+.|+++++++++++++++++.+..|+++++++++++++ ++|+||+++|+
T Consensus 292 ~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~~~~~~~i~~~~~~~~~~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~ 371 (524)
T TIGR02348 292 ILTGGQVISEELGLKLEEVTLDDLGKAKKVTVDKDNTTIVEGAGDKAAIKARVAQIKAQIEETTSDYDREKLQERLAKLA 371 (524)
T ss_pred HHhCCEEecccccCCcCcCCHHHCCCceEEEEeecEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhc
Confidence 99999999988788899999999999999999999999999999999999999999999999876 99999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAY 366 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~ 366 (431)
|+++||+|||+|+.+++|++|+++||+|++|+++++|||||||++|+++|..|++ ... ++++|+|+++|++||+.|||
T Consensus 372 ~~~~tI~irG~t~~~l~E~er~i~Dal~~~r~a~~~g~VpGGGa~e~~~s~~L~~-~~~~~~~~~~~~~~~a~AL~~ip~ 450 (524)
T TIGR02348 372 GGVAVIKVGAATETEMKEKKLRVEDALNATRAAVEEGIVPGGGVALLRAAAALEG-LKGDNEDEAIGIDIVKRALEAPLR 450 (524)
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcHHHHHHHHHHHH-hccCChHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 555 89999999999999999999
Q ss_pred HHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 367 LIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 367 ~La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
+||+|||+|+.++ ++|++. +.++|||+.+|+++||++.|||||+.||.++|++|+++|++||+|
T Consensus 451 ~La~NaG~d~~~v~~~l~~~-~~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~i 515 (524)
T TIGR02348 451 QIAENAGKDGAVVAEKVKES-KGNFGFNAATGEYEDLVEAGIIDPTKVTRSALQNAASIAGLLLTT 515 (524)
T ss_pred HHHHhCCCCHHHHHHHHHhc-CCCeeEeCcCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999 999876 335999999999999999999999999999999999999999986
No 7
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=4.5e-89 Score=725.23 Aligned_cols=420 Identities=42% Similarity=0.600 Sum_probs=400.1
Q ss_pred hHHhhhcCCcch----HHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPV----CCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~----~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+-+++++..||| +++|++++|.+||+++||||||+++||++||+++.++++ |+||..|++||++|.+.++++|++
T Consensus 65 ~TIlk~i~~~~p~~~~~a~ll~~~a~~qd~evGDGTTtvvvLa~~LL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~ 144 (555)
T PTZ00114 65 VTVAKAIEFSDRFENVGAQLIRQVASKTNDKAGDGTTTATILARAIFREGCKAVAAGLNPMDLKRGIDLAVKVVLESLKE 144 (555)
T ss_pred HHHHHhcCcCCcchhHHHHHHHHHHHhhccccCCcccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 346788889998 999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE--------------------------E---------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------F--------- 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i--------------------------f--------- 131 (431)
+++|+++.+++.++|.+|+++++.+++++++|+.+++++|.|.+ |
T Consensus 145 ~s~~v~~~~~l~~va~ts~~~~~~l~~li~eAv~~vg~~g~I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~ 224 (555)
T PTZ00114 145 QSRPVKTKEDILNVATISANGDVEIGSLIADAMDKVGKDGTITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKV 224 (555)
T ss_pred hccCCCCHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCcEEEcCCCCccceEEEEEEEEEeccccccccccccccCeE
Confidence 99999888899999999998899999999999999987765543 1
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|++|++++++.|+++.+.++|+|++|++++|+++++++|..|+++|.++|++||.|++|++++++|+|||
T Consensus 225 ~l~~~~Ili~d~~L~~~~~i~~~le~i~~~~~~llI~~~~i~~~al~~L~~n~~~g~~~i~avk~~~~g~~~~~~l~~la 304 (555)
T PTZ00114 225 ELENPLILVTDKKISSIQSILPILEHAVKNKRPLLIIAEDVEGEALQTLIINKLRGGLKVCAVKAPGFGDNRKDILQDIA 304 (555)
T ss_pred EecCCEEEEEcCCCCCHHHHHHHHHHHHHhCCCEEEECCCCcHHHHHHHHHhCCCCceEEEEEecCCCCcchHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCC-CCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhh
Q 014070 212 ILTGGQVLTGG-SGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKL 286 (431)
Q Consensus 212 ~~tG~~iis~~-~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~l 286 (431)
++|||+++++. .+..++++++++||+|++|+++++++++++++++++.|++|+++++.++++.++ ++|+||+++|
T Consensus 305 ~~tG~~~i~~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~~~~~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l 384 (555)
T PTZ00114 305 VLTGATVVSEDNVGLKLDDFDPSMLGSAKKVTVTKDETVILTGGGDKAEIKERVELLRSQIERTTSEYDKEKLKERLAKL 384 (555)
T ss_pred HHhCCEEecccccccCcccCCHHHcCCCceEEEEeceEEEEeCCCcHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Confidence 99999999997 777889999999999999999999999999999999999999999999998775 8999999999
Q ss_pred cCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhcc--C-CchHHHHHHHHHHHHHH
Q 014070 287 SGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQT--T-NSDQKIGVQIVQNALKM 363 (431)
Q Consensus 287 sg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~--~-~~~~~~gi~~~a~AL~~ 363 (431)
+|+++||+|||+|+++++|++|+++||+|++|+++++|||||||++|+++|..|++++. . ++++|+|+++|++||+.
T Consensus 385 ~~~~~tI~i~G~t~~~l~E~~r~i~Dal~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~~~~~i~~~a~AL~~ 464 (555)
T PTZ00114 385 SGGVAVIKVGGASEVEVNEKKDRIEDALNATRAAVEEGIVPGGGVALLRASKLLDKLEEDNELTPDQRTGVKIVRNALRL 464 (555)
T ss_pred CCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCcccCCcHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999875 4 79999999999999999
Q ss_pred HHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 364 AAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 364 ip~~La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
|||+||+|||+|+.++ .+|++.+++++|||+.+|+++||++.|||||+.||.++|++|+++|++||+|
T Consensus 465 ip~~La~NaG~d~~~v~~~l~~~~~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~A~~iL~i 533 (555)
T PTZ00114 465 PTKQIAENAGVEGAVVVEKILEKKDPSFGYDAQTGEYVNMFEAGIIDPTKVVRSALVDAASVASLMLTT 533 (555)
T ss_pred HHHHHHHHcCCCHHHHHHHHHhcCCCCEeEeCCCCcEeeHHhCCCEeCHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999 9998755678999999999999999999999999999999999999999985
No 8
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=5.7e-89 Score=722.02 Aligned_cols=419 Identities=40% Similarity=0.570 Sum_probs=400.8
Q ss_pred hHHhhhcCCcch----HHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPV----CCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~----~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+.+++++..||| +++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|++
T Consensus 54 ~tIlk~i~~~hp~~~~~akll~~~a~~qd~e~GDGTTtvviLa~~LL~~a~~li~~Gihp~~I~~G~~~a~~~~~~~L~~ 133 (541)
T PRK12851 54 VTIAKEIELEDKFENMGAQMVREVASKTNDVAGDGTTTATVLAQAIVREGAKAVAAGANPMDLKRGIDRAVAAVVEELKA 133 (541)
T ss_pred HHHHHHccCCCchhhHHHHHHHHHHHhhhHhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457899999999 999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE--------------------------E---------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------F--------- 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i--------------------------f--------- 131 (431)
+++|+++.+++.++|.+|+++++.+++++++|+.+++.+|.+.+ |
T Consensus 134 ~s~~~~~~~~l~~va~~s~~~~~~l~~lv~~Av~~vg~~g~i~i~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~ 213 (541)
T PRK12851 134 NARPVTTNAEIAQVATISANGDAEIGRLVAEAMEKVGNEGVITVEESKTAETELEVVEGMQFDRGYLSPYFVTDADKMEA 213 (541)
T ss_pred hccCCCCHHHHHHHHHHhccChHHHHHHHHHHHHHhcccCceEEEEccCCCcceEEEEEEEecCCccccccccCCCCCeE
Confidence 99999888889999999998899999999999999987775544 1
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|+++++.+++.++++.+.++|+|+||++++|+++++++|+.|+++|.+++++||+|+||+.|+++|+|||
T Consensus 214 ~~~~~~Ilv~d~~i~~~~~i~~~l~~i~~~~~~lvi~~~~I~~~al~~l~~n~i~g~~~i~av~~p~~~~~~~~~l~~ia 293 (541)
T PRK12851 214 ELEDPYILIHEKKISNLQDLLPVLEAVVQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIA 293 (541)
T ss_pred EecccEEEEEcCCcCcHHHHHHHHHHHHHhCcCEEEECCCCChHHHHHHHHcCCcCceeEEEEecCccccccHhHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||++++++.+++++++++++||+|+.|++++++|+++++|++++++..|+++++++++++++ ++|++|+++|+
T Consensus 294 ~~tGa~~i~~~~~~~~~~~~~~~LG~~~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~ri~~l~ 373 (541)
T PRK12851 294 ILTGGTVISEDLGIKLENVTLEQLGRAKKVVVEKENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDYDREKLQERLAKLA 373 (541)
T ss_pred HHhCCEEeccCCCCCcCcCCHHHcCCccEEEEEcceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhc
Confidence 99999999987777899999999999999999999999999999999999999999999998765 99999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYL 367 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~AL~~ip~~ 367 (431)
|+++||+|||+|+++++|+||+++||+|++|+++++|||||||++|+++|.+|++++..++++|+|+++|++||+.|||+
T Consensus 374 g~~~tI~irG~t~~~l~E~er~i~DAl~a~~~al~~g~VpGGGa~e~~~s~~L~~~~~~~~~~~~~~~~~a~AL~~ip~~ 453 (541)
T PRK12851 374 GGVAVIRVGASTEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALLRAVKALDKLETANGDQRTGVEIVRRALEAPVRQ 453 (541)
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcCcccCchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998766889999999999999999999
Q ss_pred HHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 368 IASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 368 La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+|||+|+.++ .+|++.. .++|||+.+|+++||++.|||||+.||.++|++|+++|++||+|
T Consensus 454 La~NaG~d~~~vl~~l~~~~-~~~G~d~~~g~~~d~~~~GIiDp~~vk~~al~~A~e~A~~iL~i 517 (541)
T PRK12851 454 IAENAGAEGSVVVGKLREKP-GGYGFNAATNEYGDLYAQGVIDPVKVVRTALQNAASVAGLLLTT 517 (541)
T ss_pred HHHhcCCCHHHHHHHHHhhC-CCeeeeCCCCCccchhhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999 9998754 47999999999999999999999999999999999999999986
No 9
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=6.1e-89 Score=722.20 Aligned_cols=419 Identities=38% Similarity=0.545 Sum_probs=399.7
Q ss_pred hHHhhhcCCcchH----HHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPVC----CTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~~----~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+-+++++..|||+ ++|++++|.+||+++||||||+++|+++||+++.++++ |+||..|++||++|.+.++++|++
T Consensus 54 ~tIlk~i~i~hp~~~~ga~ll~~~a~~qd~e~GDGTTt~viLa~~LL~~a~~li~~GihP~~I~~G~~~a~~~~~~~L~~ 133 (544)
T PRK12850 54 VTVAKEIELEDKFENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVREGAKLVAAGMNPMDLKRGIDLAVAAVVDELKK 133 (544)
T ss_pred HHHHHHhcCCChhhhHHHHHHHHHHhhhcchhcCCcchHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999 99999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE--------------------------E---------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------F--------- 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i--------------------------f--------- 131 (431)
+++|+++.++|.++|.+|+++++.+++++++|+..++++|.+++ |
T Consensus 134 ~s~~v~~~~~l~~va~~s~~~~~~l~~lv~eAv~~vg~~g~i~v~~~~~~g~~~~~v~G~~~~~g~~~p~~~~~~~~~~~ 213 (544)
T PRK12850 134 IAKKVTSSKEIAQVATISANGDESIGEMIAEAMDKVGKEGVITVEEAKTLGTELDVVEGMQFDRGYLSPYFVTNPEKMRA 213 (544)
T ss_pred hccCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcccCceeeEEccccCcceEEEEeEEecCccCcCccccccccCeE
Confidence 99999888899999999998899999999999999987765443 1
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|+++++.+++.++++++.++|+|+||++++|+++++++|+.|+++|.+++++||+|+||++|+++|+|||
T Consensus 214 ~~~n~~Ill~d~~i~~~~~i~~~l~~i~~~g~~lvI~~~~I~d~al~~l~~n~i~~~~~~~avk~p~~g~~~~~~le~ia 293 (544)
T PRK12850 214 ELEDPYILLHEKKISNLQDLLPILEAVVQSGRPLLIIAEDVEGEALATLVVNKLRGGLKSVAVKAPGFGDRRKAMLEDIA 293 (544)
T ss_pred EEeCCEEEEEecccCCHHHHHHHHHHHHHhCCCEEEECCCCChHHHHHHHHcCCcccceEEEEeCCCcCcccHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||++++++.+++++++++++||+|++|++++++|+++++|++++.+..|+++++++++++.+ ++|+||+++|+
T Consensus 294 ~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~ 373 (544)
T PRK12850 294 VLTGGQVISEDLGIKLENVTLDMLGRAKRVLITKENTTIIDGAGDKKNIEARVKQIRAQIEETTSDYDREKLQERLAKLA 373 (544)
T ss_pred HHhCCEEeccccCCCcccCCHHHcCCCcEEEEEeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhc
Confidence 99999999987777899999999999999999999999999999999999999999999998776 89999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYL 367 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~AL~~ip~~ 367 (431)
|+++||+|||+|+++++|+||+++||+|++|+++++|||||||++|++++..|+++...++++|+|+++|++||+.|||+
T Consensus 374 ~~~~tI~irG~t~~~l~E~er~i~DAl~~~k~a~~~g~VpGGGa~e~~~s~~L~~~~~~~~~~~~~i~~~a~Al~~ip~~ 453 (544)
T PRK12850 374 GGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARSALRGLKGANADETAGIDIVRRALEEPLRQ 453 (544)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998333899999999999999999999
Q ss_pred HHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 368 IASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 368 La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+|||+|+.++ .+|++.. .++|||+.+|+++||++.|||||+.||.++|++|+++|++||+|
T Consensus 454 La~NaG~d~~~v~~~l~~~~-~~~G~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~i 517 (544)
T PRK12850 454 IATNAGFEGSVVVGKVAELP-GNFGFNAQTGEYGDMVEAGIIDPAKVTRTALQDAASIAALLITT 517 (544)
T ss_pred HHHhcCCCHHHHHHHHHhhC-CCcceeCCCCcccchhhccCcccHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999 9998754 47899999999999999999999999999999999999999986
No 10
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=2.8e-88 Score=716.00 Aligned_cols=418 Identities=34% Similarity=0.507 Sum_probs=396.7
Q ss_pred hHHhhhcCCcchHHH----HHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPVCCT----WSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~----l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+.+++++..|||+++ |++++|.+|++++||||||+++|+++||++|+++++ |+||+.|++||++|.+.+++.|++
T Consensus 53 ~tIlk~i~~~hp~a~~g~~li~~~a~~~~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~ 132 (529)
T CHL00093 53 VTIAKEIELEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAYAIVKQGMKNVAAGANPISLKRGIEKATQYVVSQIAE 132 (529)
T ss_pred HHHHHHccCcCHHHHHHHHHHHHHHHhcCceecCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999995 888899999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE--------------------------E---------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------F--------- 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i--------------------------f--------- 131 (431)
+++|+++.++|.+||++|+++++.+++++++|+.+++++|.|++ |
T Consensus 133 ~s~~v~d~~~L~~VA~ts~~~~~~l~~lv~eAv~~vg~~g~i~~~~g~~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~ 212 (529)
T CHL00093 133 YARPVEDIQAITQVASISAGNDEEVGSMIADAIEKVGREGVISLEEGKSTVTELEITEGMRFEKGFISPYFVTDTERMEV 212 (529)
T ss_pred hCCCCCCHHHHHHHHHHhccChHHHHHHHHHHHHHhccCCceeecCCCccceeeEEEeeEEecCccCcCccccCCccceE
Confidence 99999888899999999999999999999999999987665543 2
Q ss_pred EEeCcEEEEeccccCCH-HHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHH
Q 014070 132 VLDGALVLIYDTKISNS-NVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDL 210 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~-~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~l 210 (431)
+++||+|+++|++++.. .++.++++.+.++|+|++|++++|+++++++|+.|+.++.++|++||+|++|++++++++||
T Consensus 213 ~l~n~~Ili~d~~le~~~~~i~~~l~~i~~~~~~lvi~~~~i~~~al~~l~l~k~~g~~~i~avr~~~~~~~~k~~l~~i 292 (529)
T CHL00093 213 VQENPYILLTDKKITLVQQDLLPILEQVTKTKRPLLIIAEDVEKEALATLVLNKLRGIVNVVAVRAPGFGDRRKAMLEDI 292 (529)
T ss_pred EecCceehhhcCCCCchHHHHHHHHHHHHhcCCCEEEEcCCCChHHHHHHHHhhhcccceEEEEecCCCCcchHHHHHHH
Confidence 48999999999999987 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhh
Q 014070 211 AILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKL 286 (431)
Q Consensus 211 a~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~l 286 (431)
|++|||++++++.|.+++++++++||+|++|+++++++++++ .++++.+..|+++++++++++++ ++|+||+++|
T Consensus 293 a~~tGa~~i~~~~~~~~~~~~~~~LG~~~~v~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~eR~~~l 371 (529)
T CHL00093 293 AILTGGQVITEDAGLSLETIQLDLLGQARRIIVTKDSTTIIA-DGNEEQVKARCEQLRKQIEIADSSYEKEKLQERLAKL 371 (529)
T ss_pred HHhhCCEEecccccCCcCCCCHHHCCcceEEEEecCEEEEEe-cCcHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHh
Confidence 999999999988888899999999999999999999999998 57889999999999999998876 8999999999
Q ss_pred cCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhcc-C-CchHHHHHHHHHHHHHHH
Q 014070 287 SGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQT-T-NSDQKIGVQIVQNALKMA 364 (431)
Q Consensus 287 sg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~-~-~~~~~~gi~~~a~AL~~i 364 (431)
+|+++||+|||+|+++++|+||+++||+|++|+++++|+|||||++|+++|+.|++++. . ++++|+|+++|++||+.|
T Consensus 372 ~g~~~~I~irg~t~~~l~E~er~i~DAl~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~g~~~~~i~~~a~AL~~i 451 (529)
T CHL00093 372 SGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGATLVHLSENLKTWAKNNLKEDELIGALIVARAILAP 451 (529)
T ss_pred cCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHHcCcccCCcHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999975 4 899999999999999999
Q ss_pred HHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 365 AYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 365 p~~La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+||+|||+|+.++ .++++. +.++|||+.+|+++||++.|||||+.||.++|++|+++|++||+|
T Consensus 452 p~~La~NaG~d~~~v~~~l~~~-~~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~i 518 (529)
T CHL00093 452 LKRIAENAGKNGSVIIEKVQEQ-DFEIGYNAANNKFVNMYEAGIIDPAKVTRSALQNAASIASMILTT 518 (529)
T ss_pred HHHHHHhcCCCHHHHHHHHHcc-CCCEeEECCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 999764 458999999999999999999999999999999999999999986
No 11
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=3.1e-87 Score=713.41 Aligned_cols=419 Identities=32% Similarity=0.491 Sum_probs=397.1
Q ss_pred hHHhhhcCCcch----HHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPV----CCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~----~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+-+++++..||| +++|++++|.+||+++||||||++|||++||++++++++ |+||+.|++||++|.+.+++.|++
T Consensus 109 ~TIlk~i~~~hP~~~~gakll~~~a~~qd~evGDGTTTvvVLa~~LL~ea~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~ 188 (600)
T PLN03167 109 VTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVKELKK 188 (600)
T ss_pred HHHHHHcccCCchhhHHHHHHHHHHHhhhhhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999 599999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE--------------------------E---------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------F--------- 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i--------------------------f--------- 131 (431)
+++|+++ ++|.++|++|+++++.+++++++|+.++|++|.+++ |
T Consensus 189 ~s~~v~d-~~L~~vA~tS~~~~~~i~~liaeAv~~Vg~~g~i~v~~g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~ 267 (600)
T PLN03167 189 MSKEVED-SELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSV 267 (600)
T ss_pred hcccCCH-HHHHHHHHHhccCcHHHHHHHHHHHHHhccCCcEEeccCCCccceeEEEEEEEecCCccCcccccCcCCCeE
Confidence 9999975 679999999999999999999999999998776654 1
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|++|++++++.++++.+.++|+|+||++++|+++++++|+.|++++.+++++||+|+||++++++|+|||
T Consensus 268 ~l~np~Ill~d~~i~~~~~l~~~le~i~~~g~~lvI~a~~I~~~aL~~L~~nkl~g~~~i~aVk~p~~g~~~~~~L~dia 347 (600)
T PLN03167 268 EYDNCKLLLVDKKITNARDLIGILEDAIRGGYPLLIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIA 347 (600)
T ss_pred EEeCCEEEEEccccCCHHHHHHHHHHHHHhCcCEEEEcCCCCHHHHHHHHHhhccccceEEEEEcccCCcchHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||++++++.+++++++++++||+|++|++.++.|+++++.++++.+++|+.+++..++++++ ++|++|+++|+
T Consensus 348 ~~tGa~~i~~~~~~~l~~~~~~~LG~a~~v~~~~~~t~iig~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~l~~Ri~~l~ 427 (600)
T PLN03167 348 ILTGGTVIREEVGLSLDKVGKEVLGTAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIKNLIEAAEQDYEKEKLNERIAKLS 427 (600)
T ss_pred HhhCCEEecccccCCcccCCHHHCceeeEEEEecccceeeCCCccHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHhhcC
Confidence 99999999988888899999999999999999999999999999999999999999999987665 88999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccC-CchHH-HHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQK-IGVQIVQNALKMAA 365 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~-~~~~~-~gi~~~a~AL~~ip 365 (431)
|++++|+|||+|+.+++|+||+++||||++|+|+++|+|||||++|++++.+|++++.. .+++| .|+++|++||+.||
T Consensus 428 g~~aiI~vgG~t~~~l~E~er~i~DAl~avk~ai~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~g~~~~~~Al~~p~ 507 (600)
T PLN03167 428 GGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLENDEQKVGADIVKRALSYPL 507 (600)
T ss_pred CcEEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHhcch
Confidence 99988889999999999999999999999999999999999999999999999998765 56655 67999999999999
Q ss_pred HHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 366 YLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 366 ~~La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
|+||+|||+|+.++ .+|++++++++|||+.+|+++||++.|||||+.||+++|++|+++|++||+|
T Consensus 508 r~La~NAG~d~~~vv~~L~~~~~~~~G~d~~~g~~~dm~~~GI~Dp~~Vk~~al~~A~~~A~~iL~i 574 (600)
T PLN03167 508 KLIAKNAGVNGSVVSEKVLSNDNPKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTS 574 (600)
T ss_pred hhhhhcCCCCHHHHHHHHHhcCCCCEeEeCCCCcCcchHhccCeecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 9998656678999999999999999999999999999999999999999986
No 12
>KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.2e-78 Score=608.74 Aligned_cols=408 Identities=39% Similarity=0.585 Sum_probs=394.7
Q ss_pred CcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhcccCCCHHHHH
Q 014070 20 TQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKITTFEEIA 98 (431)
Q Consensus 20 ~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~v~~~~~l~ 98 (431)
.|+..++++++++..+.+++||||||+++|+.++.+++.+-+. |.+|.+|.+|+.+|++.+.+.|+++++|+++++++.
T Consensus 79 ~~n~gaklvq~va~~tN~~agdGtttatvlar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~eeIa 158 (550)
T KOG0356|consen 79 YENIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTPEEIA 158 (550)
T ss_pred hhhhccHHHHHHHhhccCccccCcchHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCHHHHH
Confidence 3567899999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHhhccCCchhHHHHHHHHHHhhccCCceeE--------------------------E---------EEeCcEEEEecc
Q 014070 99 QVGTTAANGDGEIGELIAKVFEKGWENDLITI--------------------------F---------VLDGALVLIYDT 143 (431)
Q Consensus 99 ~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i--------------------------f---------~l~np~Ill~d~ 143 (431)
+||++|+|+|.++++++.+|++++|++|+|+| | +|+||++|+.++
T Consensus 159 qVAtiSAngD~~ig~li~~a~~kvG~~GVItv~~gkt~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll~~k 238 (550)
T KOG0356|consen 159 QVATISANGDKEIGNLISDAMKKVGRKGVITVKDGKTLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLLSEK 238 (550)
T ss_pred HHHhhhcCCcHHHHHHHHHHHHHhCcCCeEEeecCCccccchhhhhcccccccccCccccccchhhhhhhhhhhhhhhhh
Confidence 99999999999999999999999999999987 2 899999999999
Q ss_pred ccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCC
Q 014070 144 KISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGS 223 (431)
Q Consensus 144 ~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~ 223 (431)
+|++++++.|.||...+..+|++|++++++.++|.+|+.|++++.+++||||+|+||+.|++.+.|++.+|||+++..+.
T Consensus 239 ki~~v~~ivp~LE~A~~~~~PLliIAeDi~~eaL~tLIlNkLk~glqV~AvKapgfGdnrk~~l~Diai~Tg~~v~~~e~ 318 (550)
T KOG0356|consen 239 KISSVQSIVPALELALAKRRPLLIIAEDIDGEALATLVLNKLKGGLQVVAVKAPGFGDNRKNLLKDIAILTGATVFGEEL 318 (550)
T ss_pred hhhHHHHHhHHHHHhhhccCceEEEehhcchhHHHHHHhhhhccceeEEEEecCCCcchHHHhhhHHHHHhhhhhhccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C-CCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhcCCeEEEEeccC
Q 014070 224 G-MNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLSGGYAVLKVCGH 298 (431)
Q Consensus 224 ~-~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~lsg~~~tI~v~G~ 298 (431)
+ +++++.++++||.|+++.++++.+.++.+.+++++++.||+|++..++.+++ ++|++|+++|+||+++|.+||.
T Consensus 319 ~~l~le~~~~~dLG~~~evvvtkd~t~ll~g~~~~~~v~~rIeqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~ 398 (550)
T KOG0356|consen 319 STLNLEDAKLEDLGEVGEVVVTKDDTMLLKGKGNKAQVEGRIEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGH 398 (550)
T ss_pred hhcccccCchhhcCcceeEEEecCcceeeCCCCCHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCc
Confidence 8 8999999999999999999999999999999999999999999998887776 8999999999999999999999
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChH
Q 014070 299 GKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGS 377 (431)
Q Consensus 299 t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~ 377 (431)
|+.|++|++++++||||++++|+++|+|||||+++++|+..|.++... +.+++.|++++.+||..|.++|++|||.|+.
T Consensus 399 se~Ev~ekk~rv~dalnat~aaveeGivpGGG~all~~~~~l~~lk~~~~~~~k~G~eiv~~Al~~P~~~IakNAGvdg~ 478 (550)
T KOG0356|consen 399 SEVEVNEKKDRVEDALNATRAAVEEGIVPGGGTALLRAIPVLDELKATNNFDQKVGVEIVKKALRLPAQTIAKNAGVDGS 478 (550)
T ss_pred chhhhhhhhhhHHHHHHHHHHHhhcCcccCCchHHHHhhhhhhhcccccchHhhhhHHHHHHHHhhhHHHHHHhcCCchH
Confidence 999999999999999999999999999999999999999999998875 8889999999999999999999999999999
Q ss_pred HH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhc
Q 014070 378 VI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNA 430 (431)
Q Consensus 378 ~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~ 430 (431)
.+ .|++. .++|||..+|+|+||++.||+||++|.+.++..|.++|+++++
T Consensus 479 ~vv~Kv~~---~~~gyda~~~ey~dlv~~GiidP~kVvr~al~~a~~vasll~t 529 (550)
T KOG0356|consen 479 VVVEKVLN---DDYGYDAAKGEYVDLVEAGIIDPTKVVRTALTDAAGVASLLTT 529 (550)
T ss_pred HHHHHHHh---hhhhhhhhcccHHHHHhccCCChHHHHHHhhhhhhHHHHHHhh
Confidence 99 99984 3899999999999999999999999999999999999999875
No 13
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=5e-74 Score=602.32 Aligned_cols=367 Identities=18% Similarity=0.227 Sum_probs=333.3
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.+++++..|||+++|++++|++||+++||||||+++|+++||+++++++. |+||+.|++||++|.+.++++|++++.+
T Consensus 55 ~tIlk~i~~~hP~a~l~~~~a~~qd~~~GDGTTt~vvLa~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~ 134 (484)
T cd03342 55 NVLLSEMQIQHPTASMIARAATAQDDITGDGTTSNVLLIGELLKQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVP 134 (484)
T ss_pred HHHHHhccCcCHHHHHHHHHHHHhhhHhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 467889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC---CHHHHHHHHhhccCCc------hhHHHHHHHHHHhhccCC-ce--------eE---------------E------
Q 014070 91 IT---TFEEIAQVGTTAANGD------GEIGELIAKVFEKGWEND-LI--------TI---------------F------ 131 (431)
Q Consensus 91 v~---~~~~l~~vA~~s~~~~------~~la~li~~A~~~vg~~~-~i--------~i---------------f------ 131 (431)
++ +.+++.+||++|++++ +.|++++++|+..+++++ .+ ++ |
T Consensus 135 v~~~~~~~~l~~va~ts~~sk~~~~~~~~l~~l~~~A~~~v~~~~~~~~~~~I~i~ki~ggs~~ds~~i~G~~~~~~~~~ 214 (484)
T cd03342 135 VEIDTDRELLLSVARTSLRTKLHADLADQLTEIVVDAVLAIYKPDEPIDLHMVEIMQMQHKSDSDTKLIRGLVLDHGARH 214 (484)
T ss_pred CCCCCCHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHhhcCCccChhHeEEEEecCCChhhceEEeeEEEecCCCC
Confidence 87 7788999999999864 799999999999998765 22 21 1
Q ss_pred -----EEeCcEEEEeccccCCHHH-HHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhh
Q 014070 132 -----VLDGALVLIYDTKISNSNV-IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKA 205 (431)
Q Consensus 132 -----~l~np~Ill~d~~i~~~~~-~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~ 205 (431)
+++||+|+++|+++...+. +...+. .++||++++|++.++++|..| +|++||+ .+++
T Consensus 215 ~~m~~~~~n~~Ill~~~~le~~~~~~~~~~~------~~lvi~~~~I~~~al~~l~~~------~I~av~~-----~~~~ 277 (484)
T cd03342 215 PDMPKRVENAYILTCNVSLEYEKTEVNSGFF------YSVVINQKGIDPPSLDMLAKE------GILALRR-----AKRR 277 (484)
T ss_pred CCCCccccCceEEEEeCCCCCCccccCcEEE------EEEEEeCCCccHHHHHHHHHC------CCeEEEe-----CCHH
Confidence 7799999999999887653 221111 368999999999999999877 3789984 4667
Q ss_pred hHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhccchHHHHH
Q 014070 206 IMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDR 282 (431)
Q Consensus 206 ~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v---~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~l~eR 282 (431)
+|+|||++|||+++++ ++++++++||+|++| ++++++|+++++|+++
T Consensus 278 ~l~~ia~~tGa~ii~~-----l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~------------------------- 327 (484)
T cd03342 278 NMERLTLACGGVAMNS-----VDDLSPECLGYAGLVYERTLGEEKYTFIEGVKNP------------------------- 327 (484)
T ss_pred HHHHHHHHhCCEEecc-----cccCChhhCcccceEEEEEECCeEEEEEECCCCC-------------------------
Confidence 8999999999999996 899999999999999 5678899999998774
Q ss_pred HhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHHHHhhccC-CchHHHHHHHHHHH
Q 014070 283 LAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNA 360 (431)
Q Consensus 283 l~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~A 360 (431)
+++||+|||+|+.+++|+||+++||++++|+++++| +|||||++|++++.+|++++.. ++++|+++++|++|
T Consensus 328 ------~~~tI~lrg~t~~~l~E~er~l~DAl~~vk~~~~~~~~vpGGGa~e~~ls~~L~~~~~~~~~~~~~~i~~~a~A 401 (484)
T cd03342 328 ------KSCTILIKGPNDHTITQIKDAIRDGLRAVKNAIEDKCVVPGAGAFEVALYAHLKEFKKSVKGKAKLGVQAFADA 401 (484)
T ss_pred ------cEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999 9999999999999999999776 89999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 361 LKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 361 L~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
|+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+++||++.|||||+.||+++|+.|+++|++||+|
T Consensus 402 l~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~I 476 (484)
T cd03342 402 LLVIPKTLAENSGLDVQETLVKLQDEYAEGGQVGGVDLDTGEPMDPESEGIWDNYSVKRQILHSATVIASQLLLV 476 (484)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeeCCCCcccchhhcCcEEcHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999 999753 4567899999999999999999999999999999999999999997
No 14
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=7.8e-73 Score=598.60 Aligned_cols=373 Identities=19% Similarity=0.267 Sum_probs=338.8
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-+++++..|||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||+.|.+.++++|+++++|
T Consensus 59 ~tIlk~l~~~hP~a~ll~~~a~~qd~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~ 138 (519)
T TIGR02339 59 ATILKEMDIEHPAAKMLVEVAKTQDAEVGDGTTTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATK 138 (519)
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 457888999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCC--HHHHHHHHhhccCCc-------hhHHHHHHHHHHhhcc---CCce-------eE------------------E--
Q 014070 91 ITT--FEEIAQVGTTAANGD-------GEIGELIAKVFEKGWE---NDLI-------TI------------------F-- 131 (431)
Q Consensus 91 v~~--~~~l~~vA~~s~~~~-------~~la~li~~A~~~vg~---~~~i-------~i------------------f-- 131 (431)
++. .+.|.++|++|.+++ +.|++++++|+.++++ +|.+ .| |
T Consensus 139 v~~~~~~~L~~ia~tsl~sk~~~~~~~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~Ggs~~ds~lv~G~vi~~ 218 (519)
T TIGR02339 139 ISPEDRDLLKKVAETSLTGKASAEVTKDKLANLVVEAVKQVAEKRGDGKYYVDLDNIKIEKKTGGSIDDTELVEGIVVDK 218 (519)
T ss_pred cCcccHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHHhhhccCCCcccCHHHeEEEEccCcChhcceeEeeEEEec
Confidence 863 578999999988754 7899999999999984 5532 22 1
Q ss_pred ---------EEeCcEEEEeccc-------------cCCHHHHHHHHH-----------HHHhcCCcEEEEecCcchhHHH
Q 014070 132 ---------VLDGALVLIYDTK-------------ISNSNVIRQASL-----------PCMMQGQSLLVVAEDVENEVLG 178 (431)
Q Consensus 132 ---------~l~np~Ill~d~~-------------i~~~~~~~~~le-----------~i~~~~~~lvii~~~i~~~al~ 178 (431)
+++||+|+++|++ +++++++.++++ .+.+.|.|+|+++++|++.+++
T Consensus 219 ~~~~~~m~~~i~n~kIlll~~~Le~~~~~~~~~~~i~~~~~~~~~l~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~ 298 (519)
T TIGR02339 219 EPVHPGMPKRVKNAKIALLDAPLEVEKTEIDAKIRITDPDQIKKFLDQEEAMLKEMVDKIADAGANVVFCQKGIDDLAQH 298 (519)
T ss_pred CCCCCCCccccCCCcEEEEeccccccccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCCccHHHHH
Confidence 7799999999987 788888888776 7889999999999999999999
Q ss_pred HHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEec---ceEEEEcCCC
Q 014070 179 DIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATM---DNVVIIGGSG 255 (431)
Q Consensus 179 ~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~---~~~~~i~~~~ 255 (431)
+|..+ ++.+|+ +.++++|+|||++|||+++++ ++++++++||+|++|++.+ ++|+++++|+
T Consensus 299 ~L~~~------gI~~v~-----~v~~~~L~rIa~~tGa~ii~~-----~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~ 362 (519)
T TIGR02339 299 YLAKA------GILAVR-----RVKKSDIEKLARATGAKIVSS-----IKEITESDLGYAGLVEERKVGDDKMTFVEGCK 362 (519)
T ss_pred HHHHC------CCEEEe-----cCCHHHHHHHHHHhCCEEeCc-----hhhCChhhccCCceEEEEEECCeEEEEEEcCC
Confidence 98743 456776 456788999999999999986 7889899999999998754 8899999987
Q ss_pred ChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHH
Q 014070 256 ELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALL 334 (431)
Q Consensus 256 ~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el 334 (431)
++ ..+||+|||+|+.+++|.+|+++||++++|+++++| +|||||++||
T Consensus 363 ~~-------------------------------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGGa~e~ 411 (519)
T TIGR02339 363 NP-------------------------------KAVTILLRGGTEHVVDELERSIQDALHVVASALEDGKVVAGGGAVEI 411 (519)
T ss_pred CC-------------------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEeeCCCHHHH
Confidence 64 468999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHh---cCCCCeeEeCCCCccccccccCccc
Q 014070 335 YASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLE---QDSSDLGYNPARGNYVDMFKCGDVD 409 (431)
Q Consensus 335 ~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~---~~~~~~G~d~~~g~~~d~~~~gI~D 409 (431)
++|.+|++++.. ++++++++++|++||+.||++||+|||+|+.++ .+|++ .++.++|||+.+|++.||++.||||
T Consensus 412 ~ls~~l~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~d 491 (519)
T TIGR02339 412 ELALRLRSYARKIGGREQLAIEAFADALEEIPRILAENAGLDPIDALVELRAKHEKGNKNAGINVFTGEIEDMLELGVIE 491 (519)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeEEcCCCCccchhhccceE
Confidence 999999999776 899999999999999999999999999999999 99974 2456799999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHhcC
Q 014070 410 PLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 410 P~~vk~~ai~~A~~~a~~iL~i 431 (431)
|+.||+++|+.|+++|++||+|
T Consensus 492 p~~vk~~~l~~A~e~a~~iL~i 513 (519)
T TIGR02339 492 PLRVKEQAIKSATEAATMILRI 513 (519)
T ss_pred cHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999986
No 15
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=1.4e-72 Score=596.77 Aligned_cols=373 Identities=20% Similarity=0.284 Sum_probs=339.7
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.+++++..+||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|+++++|
T Consensus 58 ~tIlk~l~~~hP~a~ll~~~a~~q~~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~ 137 (517)
T cd03343 58 ATILKEMDIEHPAAKMLVEVAKTQDEEVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIK 137 (517)
T ss_pred HHHHHHccCcCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC--CHHHHHHHHhhccCCc------hhHHHHHHHHHHhhccCCc---------eeE------------------E----
Q 014070 91 IT--TFEEIAQVGTTAANGD------GEIGELIAKVFEKGWENDL---------ITI------------------F---- 131 (431)
Q Consensus 91 v~--~~~~l~~vA~~s~~~~------~~la~li~~A~~~vg~~~~---------i~i------------------f---- 131 (431)
++ +.+.+.+||++|.+++ +.+++++++|+.++++++. |.| |
T Consensus 138 v~~~~~~~l~~va~ts~~sk~~~~~~~~l~~l~~~A~~~v~~~~~~~~~~~~~~I~i~k~~Ggs~~ds~lv~G~v~~~~~ 217 (517)
T cd03343 138 VDPDDKDTLRKIAKTSLTGKGAEAAKDKLADLVVDAVLQVAEKRDGKYVVDLDNIKIEKKTGGSVDDTELIRGIVIDKEV 217 (517)
T ss_pred cCCCCHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHhhhccCCCccccHHHeeEEeecCcCHHHcceeeeEEEeccC
Confidence 86 6788999999999864 7899999999999976532 444 1
Q ss_pred -------EEeCcEEEEeccc-------------cCCHHHHHHHHH-----------HHHhcCCcEEEEecCcchhHHHHH
Q 014070 132 -------VLDGALVLIYDTK-------------ISNSNVIRQASL-----------PCMMQGQSLLVVAEDVENEVLGDI 180 (431)
Q Consensus 132 -------~l~np~Ill~d~~-------------i~~~~~~~~~le-----------~i~~~~~~lvii~~~i~~~al~~l 180 (431)
.++||+|+++|++ +++++++.++++ .+.+.|.|+|+++++|++.++++|
T Consensus 218 ~~~~m~~~~~n~~Illl~~~Le~~k~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~l 297 (517)
T cd03343 218 VHPGMPKRVENAKIALLDAPLEVKKTEIDAKIRITSPDQLQAFLEQEEAMLKEMVDKIADTGANVVFCQKGIDDLAQHYL 297 (517)
T ss_pred CCCCCccccCCCcEEEEeccccCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHH
Confidence 6799999999987 578887776554 788999999999999999999998
Q ss_pred HHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEe---cceEEEEcCCCCh
Q 014070 181 ATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGEL 257 (431)
Q Consensus 181 ~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~---~~~~~~i~~~~~~ 257 (431)
..+ ++++|+ +.++++|+|||++|||+++++ ++++++++||+|++|++. +++|+++++|+++
T Consensus 298 ~~~------gI~~v~-----~v~~~~l~~Ia~~tGa~ii~~-----~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~ 361 (517)
T cd03343 298 AKA------GILAVR-----RVKKSDMEKLARATGAKIVTN-----IDDLTPEDLGEAELVEERKVGDDKMVFVEGCKNP 361 (517)
T ss_pred hHC------CcEEEE-----eCCHHHHHHHHHHhCCEEecc-----hhhCChhhCCccceEEEEEECCeEEEEEEcCCCC
Confidence 743 456777 456788999999999999986 889999999999999875 7889999998774
Q ss_pred hhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHH
Q 014070 258 VDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYA 336 (431)
Q Consensus 258 ~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~ 336 (431)
..+||+|||+|+.+++|+||+++||++++|+++++| +|||||++|+++
T Consensus 362 -------------------------------~~~TI~lrG~t~~~l~e~~~~l~Dal~~~~~~~~~~~vvpGGG~~e~~l 410 (517)
T cd03343 362 -------------------------------KAVTILLRGGTEHVVDELERALEDALRVVADALEDGKVVAGGGAVEIEL 410 (517)
T ss_pred -------------------------------ceEEEEEECCcHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCHHHHHH
Confidence 358999999999999999999999999999999999 999999999999
Q ss_pred HHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHh---cCCCCeeEeCCCCccccccccCccccc
Q 014070 337 SKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLE---QDSSDLGYNPARGNYVDMFKCGDVDPL 411 (431)
Q Consensus 337 s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~---~~~~~~G~d~~~g~~~d~~~~gI~DP~ 411 (431)
+.+|++++.. ++++|+++++|++||+.||++|++|||+|+.++ .+|++ .++.++|||+.+|++.||++.|||||+
T Consensus 411 s~~L~~~~~~~~~~~~~~~~~~~~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~ 490 (517)
T cd03343 411 AKRLREYARSVGGREQLAVEAFADALEEIPRTLAENAGLDPIDTLVELRAAHEKGNKNAGLDVYTGEVVDMLEKGVIEPL 490 (517)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeecCCCCccchhhcCceecH
Confidence 9999998766 899999999999999999999999999999999 99974 245679999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHhcC
Q 014070 412 KHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 412 ~vk~~ai~~A~~~a~~iL~i 431 (431)
.||+++|+.|+++|++||+|
T Consensus 491 ~vk~~~l~~A~e~a~~iL~i 510 (517)
T cd03343 491 RVKKQAIKSATEAATMILRI 510 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999986
No 16
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=9.8e-73 Score=597.72 Aligned_cols=373 Identities=18% Similarity=0.205 Sum_probs=331.4
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-+++++..|||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|++++.+
T Consensus 59 ~TIlk~i~i~hP~a~ll~~~a~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~ 138 (531)
T TIGR02347 59 NVLLNEMQIQHPTASMIARAATAQDDITGDGTTSTVILIGELLKQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIK 138 (531)
T ss_pred HHHHHhccccChHHHHHHHHHHHhhhhhcCcHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999976
Q ss_pred C---CCHHHHHHHHhhccCC------chhHHHHHHHHHHhhccCCc-e-----eE------------------E------
Q 014070 91 I---TTFEEIAQVGTTAANG------DGEIGELIAKVFEKGWENDL-I-----TI------------------F------ 131 (431)
Q Consensus 91 v---~~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~~~-i-----~i------------------f------ 131 (431)
+ .+.+.|.++|+++.++ ++.|++++++|+..+++++. + .+ |
T Consensus 139 ~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~iv~~Av~~v~~~~~~i~~~~I~i~k~~g~s~~ds~~v~Giv~~~~~~~ 218 (531)
T TIGR02347 139 TEDEVDRELLLNVARTSLRTKLPIDLADQLTEIVVDAVLAIKKDGEQIDLFMVEIMEMKHKSATDTTLIRGLVLDHGARH 218 (531)
T ss_pred CCCCCCHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHhhcCCCCChhHeEEEEecCCCccccEEEeeEEEecCcCC
Confidence 4 4678899999988864 77999999999999987653 3 22 1
Q ss_pred -----EEeCcEEEEeccccCC-------------HHHH-----------HHHHHHHHhcCC-------c---EEEEecCc
Q 014070 132 -----VLDGALVLIYDTKISN-------------SNVI-----------RQASLPCMMQGQ-------S---LLVVAEDV 172 (431)
Q Consensus 132 -----~l~np~Ill~d~~i~~-------------~~~~-----------~~~le~i~~~~~-------~---lvii~~~i 172 (431)
+++||+|+++|+++.. ++++ ...++.+.+.|+ + +|+++++|
T Consensus 219 ~~~~~~~~n~~Ill~~~~le~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I 298 (531)
T TIGR02347 219 PDMPRRVKNAYILTCNVSLEYEKTEVNSGFFYSNAEQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGI 298 (531)
T ss_pred CCCceeccCceEEEEeCCCCCCccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCc
Confidence 7789999999986543 2332 334456666441 3 78889999
Q ss_pred chhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEE---EEecceEE
Q 014070 173 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV---IATMDNVV 249 (431)
Q Consensus 173 ~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v---~v~~~~~~ 249 (431)
++.++++|..+ +|++++. .++++|+|||++|||+++++ ++++++++||+|++| ++++++|+
T Consensus 299 ~~~a~~~L~~~------~I~~i~r-----v~~~~le~ia~~tGa~~i~~-----l~~~~~~~LG~~~~v~~~~ig~~~~~ 362 (531)
T TIGR02347 299 DPPSLDLLAKE------GIMALRR-----AKRRNMERLTLACGGEALNS-----VEDLTPECLGWAGLVYETSIGEEKYT 362 (531)
T ss_pred cHHHHHHHHHC------CceEEcc-----CCHHHHHHHHHHhCCEEecc-----cccCCccccccceEEEEEEECCeEEE
Confidence 99999998864 5678874 44668999999999999986 899999999999999 67888999
Q ss_pred EEcCCCChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCC
Q 014070 250 IIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPG 328 (431)
Q Consensus 250 ~i~~~~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpG 328 (431)
++++|+++ ++|||+|||+|+.+++|+||+++||+|++|+++++| +|||
T Consensus 363 ~i~~~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~v~~~~~~~~~vvpG 411 (531)
T TIGR02347 363 FIEEVKNP-------------------------------KSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIEDKCVVPG 411 (531)
T ss_pred EEEcCCCC-------------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeC
Confidence 99998774 579999999999999999999999999999999998 9999
Q ss_pred ccHHHHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCcccccc
Q 014070 329 SGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMF 403 (431)
Q Consensus 329 GGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~ 403 (431)
||++|+++|.+|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||+
T Consensus 412 GGa~E~~ls~~l~~~~~~~~~~~~~~i~~fa~ALe~ip~~La~NaG~d~~~vl~~l~~~~~~~~~~~Gid~~~g~~~d~~ 491 (531)
T TIGR02347 412 AGAFEIAAYCHLKEEKKSVKGKAKLGVEAFANALLVIPKTLAENSGLDAQDTLVKLEDEHDEGGEVVGVDLETGEPIDPE 491 (531)
T ss_pred CCHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeeeccCCCccchh
Confidence 999999999999999776 899999999999999999999999999999999 999763 345789999999999999
Q ss_pred ccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 404 KCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 404 ~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
+.|||||+.||+++|++|+++|++||||
T Consensus 492 ~~gV~Dp~~vk~~al~~A~e~a~~iLrI 519 (531)
T TIGR02347 492 IKGIWDNYRVKKQLIQSATVIASQLLLV 519 (531)
T ss_pred hccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999997
No 17
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.1e-72 Score=596.91 Aligned_cols=379 Identities=19% Similarity=0.259 Sum_probs=336.0
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.+++++..+||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|+++++|
T Consensus 52 ~tIlk~i~~~hP~akll~~~a~~qd~~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~ 131 (517)
T TIGR02342 52 ATILKQMGVIHPAAKMLVELSKAQDIEAGDGTTSVVILAGALLGACETLLERGIHPTTISESFQIAADEAIKILDEMSIP 131 (517)
T ss_pred HHHHHhccccChHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 467889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC--CHHHHHHHHhhccCC------chhHHHHHHHHHHhhcc---CCcee-----E------------------E-----
Q 014070 91 IT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWE---NDLIT-----I------------------F----- 131 (431)
Q Consensus 91 v~--~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~---~~~i~-----i------------------f----- 131 (431)
++ +.+.|.++|.+|.++ .+.|++++++|+..+++ ++.++ + |
T Consensus 132 ~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~~~i~i~k~~Ggs~~ds~li~Givl~k~~~ 211 (517)
T TIGR02342 132 VDLSDREILIKSATTSLSSKVVSQYSSLLAPLAVDAVLKVIDPENDKNVDLNDIKVVKKLGGTIDDTELIEGLVFTQKAS 211 (517)
T ss_pred cCccCHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHhccccCCccCHHHeeEEeccCCChhhcEEEeeEEEecccc
Confidence 86 678899999988863 34679999999999875 23332 1 1
Q ss_pred -------EEeCcEEEEecccc-------------CCH-----------HHHHHHHHHHHhcCCcEEEEecCcchhHHHHH
Q 014070 132 -------VLDGALVLIYDTKI-------------SNS-----------NVIRQASLPCMMQGQSLLVVAEDVENEVLGDI 180 (431)
Q Consensus 132 -------~l~np~Ill~d~~i-------------~~~-----------~~~~~~le~i~~~~~~lvii~~~i~~~al~~l 180 (431)
.++||+|+++++++ .++ +++.++++.+.+.|+|+|+++++|++++++.+
T Consensus 212 ~~~~mpk~i~n~kI~ll~~~Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~lvi~~~~I~~~~l~~l 291 (517)
T TIGR02342 212 RSAGGPTRIEKAKIGLIQFQISPPKTDMENQVIVNDYAQMDRVLKEERKYILNIVKKIKKTGCNVLLIQKSILRDAVNDL 291 (517)
T ss_pred ccCCCCccccCCcEEEEecCCCCCcccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHH
Confidence 45788999987643 232 34566788899999999999999987777777
Q ss_pred HHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEE-E--ecceEEEEcCCCCh
Q 014070 181 ATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI-A--TMDNVVIIGGSGEL 257 (431)
Q Consensus 181 ~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~-v--~~~~~~~i~~~~~~ 257 (431)
+.|.+.+ .+|++|+ +.++++|+|||++|||+++++ ++++++++||+|+.|+ + +++.++++++|+++
T Consensus 292 ~~~~l~~-~~I~av~-----~v~~~~LerIa~~tGa~ii~~-----~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~~ 360 (517)
T TIGR02342 292 ALHFLAK-MKIMVVK-----DIEREEVEFICKTIGCKPIAS-----IDHFTADKLGSAELVEEVTTDGGKIIKITGIQNA 360 (517)
T ss_pred HHHHHhh-CCceEEe-----cCCHHHHHHHHHHHCCEEEcc-----hhhcCcccCcCCceEEEEEECCeEEEEEEccCCC
Confidence 7777665 7899998 567788999999999999996 8889999999999998 3 45567788887552
Q ss_pred hhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHc-CCCCCccHHHHHH
Q 014070 258 VDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYA 336 (431)
Q Consensus 258 ~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~el~~ 336 (431)
++++||+|||+|+++++|+||+++||++++|+++++ ++|||||++|+++
T Consensus 361 ------------------------------~~~~tIllrG~t~~~l~E~er~i~DAl~~v~~~~~~~~~VpGGGa~e~~l 410 (517)
T TIGR02342 361 ------------------------------GKTVTVLLRGSNKLVIDEAERSLHDALCVIRSLVKKRGLIPGGGAPEIEI 410 (517)
T ss_pred ------------------------------CceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECcCHHHHHH
Confidence 478999999999999999999999999999999997 6999999999999
Q ss_pred HHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCccccc
Q 014070 337 SKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPL 411 (431)
Q Consensus 337 s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~ 411 (431)
|.+|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+++||++.|||||+
T Consensus 411 s~~l~~~~~~~~~~~~~~i~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI~dp~ 490 (517)
T TIGR02342 411 AIKLSKLARTMKGVESYCVRAFADALEVIPYTLAENAGLNPIDVVTELRNRHANGEKYAGISVRKGGITDMLEEEVLQPL 490 (517)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCccceecCCCCccchhhccceEcH
Confidence 9999999776 899999999999999999999999999999999 999763 45679999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHhcC
Q 014070 412 KHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 412 ~vk~~ai~~A~~~a~~iL~i 431 (431)
.||+++|++|+++|++||+|
T Consensus 491 ~vk~~ai~~A~e~a~~iL~i 510 (517)
T TIGR02342 491 LVTTSAVTLASETVRMILKI 510 (517)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999997
No 18
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.5e-72 Score=595.58 Aligned_cols=378 Identities=16% Similarity=0.214 Sum_probs=334.3
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh-hcc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC-QAR 89 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~-~s~ 89 (431)
+.+++++..|||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|++ +++
T Consensus 51 ~tIlk~i~~~hP~akll~~~a~~q~~~~GDGTTt~vvLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~ 130 (527)
T cd03335 51 ATILKLLEVEHPAAKILVELAQLQDKEVGDGTTSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSI 130 (527)
T ss_pred HHHHHhccccChHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 457889999999999999999999999999999999999999999999999 999999999999999999999996 899
Q ss_pred cCC--CHHHHHHHHhhccC-----C-chhHHHHHHHHHHhhc---cCCc-------eeE------------------E--
Q 014070 90 KIT--TFEEIAQVGTTAAN-----G-DGEIGELIAKVFEKGW---ENDL-------ITI------------------F-- 131 (431)
Q Consensus 90 ~v~--~~~~l~~vA~~s~~-----~-~~~la~li~~A~~~vg---~~~~-------i~i------------------f-- 131 (431)
|++ +.+.|.++|++|.+ + .+.+++++++|+..++ .+|. |.+ |
T Consensus 131 ~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~l~~~A~~~v~~~~~~~~~~~~~~~I~i~~~~Ggs~~~s~li~Givi~~ 210 (527)
T cd03335 131 SVDNLGKESLINVAKTSMSSKIIGADSDFFANMVVDAILAVKTTNEKGKTKYPIKAVNILKAHGKSAKESYLVNGYALNC 210 (527)
T ss_pred CCCccCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcccccCCCccCHHHeEEEEecCcChhhcceeeeEEEec
Confidence 987 67889999998876 2 4789999999999985 2232 111 1
Q ss_pred ---------EEeCcEEEEeccccCC-------------HHH-----------HHHHHHHHHhcCCcEEEEecCcchhHHH
Q 014070 132 ---------VLDGALVLIYDTKISN-------------SNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLG 178 (431)
Q Consensus 132 ---------~l~np~Ill~d~~i~~-------------~~~-----------~~~~le~i~~~~~~lvii~~~i~~~al~ 178 (431)
.++||+|+++|+++.. +++ +.+.++.+.+.|.|+||++++|++.+++
T Consensus 211 ~~~~~~m~~~i~n~kIlll~~~Le~~~~~~~~~~~~~~~~~le~~~~~E~~~l~~~i~~i~~~g~~lvi~~k~I~d~al~ 290 (527)
T cd03335 211 TRASQGMPTRVKNAKIACLDFNLQKTKMKLGVQVVVTDPEKLEKIRQRESDITKERIKKILAAGANVVLTTGGIDDMCLK 290 (527)
T ss_pred ccCCCCCcccccCCcEEEEeccCCCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHH
Confidence 7789999999987643 222 2355677889999999999999999999
Q ss_pred HHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCC-CccCCCCCCceeccEEE---EecceEEEEcCC
Q 014070 179 DIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGM-NSTYFVPLKLGSCKRVI---ATMDNVVIIGGS 254 (431)
Q Consensus 179 ~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~-~l~~~~~~~LG~~~~v~---v~~~~~~~i~~~ 254 (431)
+|..+ ++++++ +.++++|+|||++|||+++++..++ ..+++++++||+|+.|+ +++++|+++++|
T Consensus 291 ~L~~~------~I~~v~-----~v~~~~lerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~ 359 (527)
T cd03335 291 YFVEA------GAMAVR-----RVKKEDLRRIAKATGATLVSTLANLEGEETFDPSYLGEAEEVVQERIGDDELILIKGT 359 (527)
T ss_pred HHHHC------CcEEEE-----eCCHHHHHHHHHHhCCEEecChhhcCcccccCHhhCccCceEEEEEECCeEEEEEEcC
Confidence 99875 467877 4567889999999999999874333 22445667899999998 678899999998
Q ss_pred CChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHH
Q 014070 255 GELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVAL 333 (431)
Q Consensus 255 ~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~e 333 (431)
+++ ++|||+|||+|+.+++|+||+++||++++++++++| +|||||++|
T Consensus 360 ~~~-------------------------------~~~TIllrG~t~~~l~e~er~i~Dal~~~~~~~~~~~vvpGGGa~e 408 (527)
T cd03335 360 KKR-------------------------------SSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVE 408 (527)
T ss_pred CCC-------------------------------CEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHH
Confidence 763 689999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---C--------CCCeeEeCCCCccc
Q 014070 334 LYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---D--------SSDLGYNPARGNYV 400 (431)
Q Consensus 334 l~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~--------~~~~G~d~~~g~~~ 400 (431)
++++.+|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. + ++++|||+.+|++.
T Consensus 409 ~~ls~~L~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~~~~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~ 488 (527)
T cd03335 409 TALSIYLENFATTLGSREQLAIAEFAEALLVIPKTLAVNAAKDATELVAKLRAYHAAAQVKPDKKHLKWYGLDLINGKVR 488 (527)
T ss_pred HHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCccccccCceEeEECCCCccc
Confidence 9999999999776 899999999999999999999999999999999 999762 2 34689999999999
Q ss_pred cccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 401 DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 401 d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||++.|||||+.||.++|+.|+|+|++||||
T Consensus 489 d~~~~gV~dp~~~k~~~i~~A~e~a~~iLrI 519 (527)
T cd03335 489 DNLEAGVLEPTVSKIKSLKFATEAAITILRI 519 (527)
T ss_pred chhhccceecHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999997
No 19
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=3.3e-72 Score=593.50 Aligned_cols=379 Identities=19% Similarity=0.243 Sum_probs=338.7
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.+++++..+||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|++++.|
T Consensus 51 ~tIlk~l~~~hp~a~ll~~~a~~q~~~~GDGTtt~vvLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~ 130 (515)
T cd03338 51 ATILKQMSVLHPAAKMLVELSKAQDIEAGDGTTSVVVLAGALLSACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIP 130 (515)
T ss_pred HHHHHhCcCcCHHHHHHHHHHHHHHhHhcCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 567889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC--CHHHHHHHHhhccC------CchhHHHHHHHHHHhhccCCc---e-----eE------------------E-----
Q 014070 91 IT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWENDL---I-----TI------------------F----- 131 (431)
Q Consensus 91 v~--~~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~~~~---i-----~i------------------f----- 131 (431)
++ +.++|.++|++|++ +++.+++++++|+.++++++. + .+ |
T Consensus 131 v~~~~~~~l~~va~ts~~sK~~~~~~~~ls~li~~A~~~v~~~~~~~~~d~~~i~i~~~~Ggs~~ds~lv~Giv~~k~~~ 210 (515)
T cd03338 131 VDLNDRESLIKSATTSLNSKVVSQYSSLLAPIAVDAVLKVIDPATATNVDLKDIRIVKKLGGTIEDTELVDGLVFTQKAS 210 (515)
T ss_pred CCCCCHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHhhcccccCcCCHHHeEEEEecCCChhhceeeeeEEEecccc
Confidence 86 67889999999997 457899999999999987652 1 11 2
Q ss_pred -------EEeCcEEEEecccc-------------CCH-----------HHHHHHHHHHHhcCCcEEEEecCcchhHHHHH
Q 014070 132 -------VLDGALVLIYDTKI-------------SNS-----------NVIRQASLPCMMQGQSLLVVAEDVENEVLGDI 180 (431)
Q Consensus 132 -------~l~np~Ill~d~~i-------------~~~-----------~~~~~~le~i~~~~~~lvii~~~i~~~al~~l 180 (431)
.+.||+|+++++++ +++ +++.++++.+.+.|.|+|+++++|++++++.+
T Consensus 211 ~~~~~p~~i~n~ki~ll~~~le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~i~~~~v~~l 290 (515)
T cd03338 211 KKAGGPTRIEKAKIGLIQFCLSPPKTDMDNNIVVNDYAQMDRILREERKYILNMCKKIKKSGCNVLLIQKSILRDAVSDL 290 (515)
T ss_pred CcCCCCccccCCcEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHH
Confidence 34778999977543 233 34566788899999999999999987777777
Q ss_pred HHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEe---cceEEEEcCCCCh
Q 014070 181 ATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGEL 257 (431)
Q Consensus 181 ~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~---~~~~~~i~~~~~~ 257 (431)
+.|.+.+ .+|++|+ ++++++|+|||++|||+++++ ++++++++||+|+.|++. +++++++.+|.+
T Consensus 291 ~~~~l~~-~~I~av~-----~~~~~~LerIa~~tGa~ii~s-----l~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~- 358 (515)
T cd03338 291 ALHFLAK-LKIMVVK-----DIEREEIEFICKTIGCKPVAS-----IDHFTEDKLGSADLVEEVSLGDGKIVKITGVKN- 358 (515)
T ss_pred HHHHHHH-CCceEEe-----cCCHHHHHHHHHHHCCEEecc-----cccCCHhhCCCCceEEEEEECCeEEEEEEecCC-
Confidence 7776664 7889998 567889999999999999996 888999999999999863 456888888754
Q ss_pred hhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHH
Q 014070 258 VDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYA 336 (431)
Q Consensus 258 ~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~ 336 (431)
+++.|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|+++
T Consensus 359 -----------------------------~~~~~TIllrG~t~~~l~e~~r~i~Dal~~~~~~~~~~~vvpGGG~~e~~l 409 (515)
T cd03338 359 -----------------------------PGKTVTILVRGSNKLVLDEAERSLHDALCVIRCLVKKRALIPGGGAPEIEI 409 (515)
T ss_pred -----------------------------CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECCCHHHHHH
Confidence 14689999999999999999999999999999999999 999999999999
Q ss_pred HHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCccccc
Q 014070 337 SKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPL 411 (431)
Q Consensus 337 s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~ 411 (431)
+.+|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+++||++.|||||+
T Consensus 410 s~~l~~~~~~~~~~~~~~~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~ 489 (515)
T cd03338 410 ALQLSEWARTLTGVEQYCVRAFADALEVIPYTLAENAGLNPISIVTELRNRHAQGEKNAGINVRKGAITNILEENVVQPL 489 (515)
T ss_pred HHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCccceeccCCCccchhhcCceecH
Confidence 9999999766 899999999999999999999999999999999 999763 45679999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHhcC
Q 014070 412 KHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 412 ~vk~~ai~~A~~~a~~iL~i 431 (431)
.||+++++.|+++|++||+|
T Consensus 490 ~vk~~~l~~A~~~a~~iL~I 509 (515)
T cd03338 490 LVSTSAITLATETVRMILKI 509 (515)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999997
No 20
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.9e-71 Score=587.37 Aligned_cols=373 Identities=19% Similarity=0.259 Sum_probs=331.9
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-++++|..+||+++|++++|++||+++||||||+++|+++||++++++++ |+||+.|++||++|.+.++++|+++++|
T Consensus 58 ~tIlk~l~~~hP~akll~~~a~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~ 137 (517)
T cd03336 58 ATILKSIGVDNPAAKVLVDISKVQDDEVGDGTTSVTVLAAELLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVD 137 (517)
T ss_pred HHHHHHccCcChHHHHHHHHHHHHHhHhCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred CC-----CHHHHHHHHhhcc--C----CchhHHHHHHHHHHhhccC---CceeE------------------E-------
Q 014070 91 IT-----TFEEIAQVGTTAA--N----GDGEIGELIAKVFEKGWEN---DLITI------------------F------- 131 (431)
Q Consensus 91 v~-----~~~~l~~vA~~s~--~----~~~~la~li~~A~~~vg~~---~~i~i------------------f------- 131 (431)
++ +.++|.++|+++. + +++.|++++++|+.+++.. ..+.+ |
T Consensus 138 ~~~~~~~~~~~l~~ia~t~lssk~~~~~~~~l~~l~~~A~~~v~~~~~~~~i~i~ki~G~s~~ds~l~~G~v~~~~~~~~ 217 (517)
T cd03336 138 HSSDEEAFREDLLNIARTTLSSKILTQDKEHFAELAVDAVLRLKGSGNLDAIQIIKKLGGSLKDSYLDEGFLLDKKIGVN 217 (517)
T ss_pred cccccchhHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHhhccCCccceeEEEccCCCccceEEEeeEEEecccCCC
Confidence 84 2467999998544 3 4678999999999998632 12222 1
Q ss_pred ---EEeCcEEEEeccccC--------------CHHHHHH-----------HHHHHHhcCCcEEEEecCcchhHHHHHHHh
Q 014070 132 ---VLDGALVLIYDTKIS--------------NSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENEVLGDIATD 183 (431)
Q Consensus 132 ---~l~np~Ill~d~~i~--------------~~~~~~~-----------~le~i~~~~~~lvii~~~i~~~al~~l~~n 183 (431)
+++||+|+++|+++. +++++.+ .++.+.+.|.+++++++.|++.++++|..+
T Consensus 218 ~~~~~~n~kIli~~~~le~~~~~~~~~~~~~~~~~~~~~l~~~E~~~~~~~v~~I~~~gv~~v~~~~~I~~~~~~~l~~~ 297 (517)
T cd03336 218 QPKRIENAKILIANTPMDTDKIKIFGAKVRVDSTAKVAEIEEAEKEKMKNKVEKILKHGINCFINRQLIYNYPEQLFADA 297 (517)
T ss_pred CCCeeccccEEEEecCCCcccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC
Confidence 779999999998654 5555533 356788899999999999999999988754
Q ss_pred ccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ecceEEEEcCCCChhhH
Q 014070 184 FTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGELVDI 260 (431)
Q Consensus 184 ~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~~~~~~i~~~~~~~~i 260 (431)
+|++||+|++. +|+|||++|||+++++ ++++++++||+|+.|+. ++++++++.+|++
T Consensus 298 ------~I~av~~v~~~-----~L~rIa~~tGa~ii~~-----l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~---- 357 (517)
T cd03336 298 ------GIMAIEHADFD-----GVERLALVTGGEIAST-----FDHPELVKLGTCKLIEEIMIGEDKLIRFSGVAA---- 357 (517)
T ss_pred ------CcEEEecCCHH-----HHHHHHHHhCCEEecc-----cCCCCcccccccceEEEEEECCeEEEEEEccCC----
Confidence 57899988644 4999999999999986 88999999999999874 5678999998865
Q ss_pred HHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHH
Q 014070 261 QERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKE 339 (431)
Q Consensus 261 ~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~ 339 (431)
++.|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|+++|.+
T Consensus 358 ---------------------------~~~~TI~lrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGGa~e~~ls~~ 410 (517)
T cd03336 358 ---------------------------GEACTIVLRGASQQILDEAERSLHDALCVLAQTVKDTRVVLGGGCSEMLMAKA 410 (517)
T ss_pred ---------------------------CceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHH
Confidence 3679999999999999999999999999999999997 999999999999999
Q ss_pred HHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccH
Q 014070 340 LDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHV 414 (431)
Q Consensus 340 L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~vk 414 (431)
|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+++||++.|||||+.||
T Consensus 411 l~~~~~~~~~~~~~~i~~~a~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk 490 (517)
T cd03336 411 VEELAKKTPGKKSLAIEAFAKALRQLPTIIADNAGYDSAELVAQLRAAHYNGNTTAGLDMRKGTVGDMKELGITESFKVK 490 (517)
T ss_pred HHHHhhhCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCceeeecCCCCccchhhcCceecHHHH
Confidence 9999776 899999999999999999999999999999999 999763 45679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC
Q 014070 415 PSEFAKATSMISLKNAI 431 (431)
Q Consensus 415 ~~ai~~A~~~a~~iL~i 431 (431)
+++|+.|+++|++||+|
T Consensus 491 ~~~l~~A~e~a~~iL~i 507 (517)
T cd03336 491 RQVLLSASEAAEMILRV 507 (517)
T ss_pred HHHHHHHHHHHHHHHhH
Confidence 99999999999999986
No 21
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.7e-71 Score=590.06 Aligned_cols=378 Identities=16% Similarity=0.207 Sum_probs=334.2
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhh-cc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQ-AR 89 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~-s~ 89 (431)
+.+++++..+||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||+.|.+.++++|+++ ++
T Consensus 55 ~tIlk~i~~~hP~akll~~~a~~qd~~~GDGTTt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~ 134 (536)
T TIGR02340 55 ATILKLLEVEHPAAKILVELAQLQDREVGDGTTSVVIIAAELLKRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSV 134 (536)
T ss_pred HHHHHHhcccChHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 467889999999999999999999999999999999999999999999999 9999999999999999999999975 88
Q ss_pred cCC--CHHHHHHHHhhccC------CchhHHHHHHHHHHhhc---cCCc--e-----eE------------------E--
Q 014070 90 KIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGW---ENDL--I-----TI------------------F-- 131 (431)
Q Consensus 90 ~v~--~~~~l~~vA~~s~~------~~~~la~li~~A~~~vg---~~~~--i-----~i------------------f-- 131 (431)
|++ +.+++.++|+++.+ +++.+++++++|+..++ .+|. + .+ |
T Consensus 135 ~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~G~s~~~s~~i~Gi~i~~ 214 (536)
T TIGR02340 135 SVDELGREALINVAKTSMSSKIIGLDSDFFSNIVVDAVLAVKMTNENGETKYPIKAVNILKAHGGSARESYLVKGYALNC 214 (536)
T ss_pred CCCcccHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHhcccccCccccchHHeEEEEecCCCccccEEEEEEEEec
Confidence 887 67889999998876 57899999999999986 3342 2 11 1
Q ss_pred ---------EEeCcEEEEeccccCCH-------------HH-----------HHHHHHHHHhcCCcEEEEecCcchhHHH
Q 014070 132 ---------VLDGALVLIYDTKISNS-------------NV-----------IRQASLPCMMQGQSLLVVAEDVENEVLG 178 (431)
Q Consensus 132 ---------~l~np~Ill~d~~i~~~-------------~~-----------~~~~le~i~~~~~~lvii~~~i~~~al~ 178 (431)
+++||+|+++|+++... .+ +.+.++.+.+.|.++|+++++|++.+++
T Consensus 215 ~~~~~~m~~~~~n~kIli~~~~L~~~~~~~~~~~~~~~~~~le~~~~~E~~~i~~~i~~I~~~g~~lvi~~k~I~~~a~~ 294 (536)
T TIGR02340 215 TRASQQMPKRIKKAKIACLDFNLQKQKMALGVQIVVDDPAKLEGIRQREADITKERIKKILKAGANVVLTTGGIDDMCLK 294 (536)
T ss_pred ccCCCCCcceecCCcEEEEecCCCCCcccCceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHH
Confidence 78999999999876433 22 2345667778899999999999999999
Q ss_pred HHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCC-CccCCCCCCceeccEEE---EecceEEEEcCC
Q 014070 179 DIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGM-NSTYFVPLKLGSCKRVI---ATMDNVVIIGGS 254 (431)
Q Consensus 179 ~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~-~l~~~~~~~LG~~~~v~---v~~~~~~~i~~~ 254 (431)
+|..+ ++++++ +.++++|+|||++|||+++++..++ ..+++++++||+|+.|+ +++++|+++++|
T Consensus 295 ~L~k~------~I~~i~-----rv~~~~LerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~ 363 (536)
T TIGR02340 295 YFVEA------GAMGVR-----RCKKEDLKRIAKATGGTLVSTLADLEGEETFDASYLGFADEVVEERIADDECILIKGT 363 (536)
T ss_pred HHHHC------CcEEEe-----cCCHHHHHHHHHHhCCEEecchhhcCccccccccccccCceEEEEEECCeEEEEEEcC
Confidence 98865 357777 3457789999999999999985443 33456778899999998 788899999988
Q ss_pred CChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHH
Q 014070 255 GELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVAL 333 (431)
Q Consensus 255 ~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~e 333 (431)
+++ +++||+|||+|+.+++|++|+++||+|++|+++++| +|||||++|
T Consensus 364 ~~~-------------------------------~~~TIlirG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vVpGGGa~e 412 (536)
T TIGR02340 364 KGR-------------------------------KSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVE 412 (536)
T ss_pred CCC-------------------------------CEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhcCCCEEECCCHHH
Confidence 764 479999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---C--------CCCeeEeCCCCccc
Q 014070 334 LYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---D--------SSDLGYNPARGNYV 400 (431)
Q Consensus 334 l~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~--------~~~~G~d~~~g~~~ 400 (431)
++++.+|++++.. ++++++++++|++||+.||++||+|||+|+.++ .+|++. + +.++|||+.+|++.
T Consensus 413 ~~ls~~l~~~~~~~~~~~~~~~~~fa~AL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~ 492 (536)
T TIGR02340 413 TALSIYLENFATTLGSREQLAIAEFAEALLIIPKVLAVNAALDSTELVAKLRAYHAAAQLKPEKKHLKWYGLDLSNGKIR 492 (536)
T ss_pred HHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCcccccccCceEeEEccCCccc
Confidence 9999999998766 899999999999999999999999999999999 998752 1 34689999999999
Q ss_pred cccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 401 DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 401 d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||++.|||||+.||.++|+.|+++|++||+|
T Consensus 493 d~~~~gI~Dp~~~k~~~l~~A~e~a~~iL~I 523 (536)
T TIGR02340 493 DNKEAGVLEPAVSKVKSLKFATEAAITILRI 523 (536)
T ss_pred cchhccceecHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999997
No 22
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=4.7e-71 Score=585.79 Aligned_cols=373 Identities=13% Similarity=0.145 Sum_probs=332.6
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.+++++-.+||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|+++++|
T Consensus 59 ~tIl~~l~~~hP~akll~~~a~~q~~~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~ 138 (525)
T TIGR02344 59 NAILREIDVAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLSVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIP 138 (525)
T ss_pred HHHHHhccCCCHHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 467899999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC--CHHHHHHHHhhccCC------chhHHHHHHHHHHhhccCC-----------ceeE------------------E--
Q 014070 91 IT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND-----------LITI------------------F-- 131 (431)
Q Consensus 91 v~--~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~~-----------~i~i------------------f-- 131 (431)
++ +.+.+.++|.++.++ ++.+++++++|+..+++++ .|+| |
T Consensus 139 ~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~~~Ai~~v~~~~~~~~~~~d~~~~I~i~ki~Gg~~~dS~lv~Gvvi~k 218 (525)
T TIGR02344 139 VDVNDDAAMLKLIQSCIGTKFVSRWSDLMCDLALDAVRTVKRDLGNGRKEIDIKRYAKVEKIPGGDIEDSCVLKGVMINK 218 (525)
T ss_pred cCCCCHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHhhccccCCCCccChhhceEEEEecCCChHhcCcccceEEec
Confidence 86 566799999665432 5789999999999998643 1333 1
Q ss_pred ---------EEeCcEEEEeccccCC-------------HHHHHHHHH-----------HHHhcCCcEEEEecCcchhHHH
Q 014070 132 ---------VLDGALVLIYDTKISN-------------SNVIRQASL-----------PCMMQGQSLLVVAEDVENEVLG 178 (431)
Q Consensus 132 ---------~l~np~Ill~d~~i~~-------------~~~~~~~le-----------~i~~~~~~lvii~~~i~~~al~ 178 (431)
+++||+|+++|+++.. ++++.++++ ++.+.|.+++++.+.+++.+++
T Consensus 219 ~~~~~~m~~~~~n~kIlll~~~Le~~~~~~~~~i~i~~~~~~~~~l~~E~~~l~~~v~~i~~~~~~vIi~~k~I~dla~~ 298 (525)
T TIGR02344 219 DVTHPKMRRYIENPRIVLLDCPLEYKKGESQTNVEIMKEEDWNRILQMEEEYVQLMCEDIIAVKPDLVITEKGVSDLAQH 298 (525)
T ss_pred ccCCCCCccccCCCCEEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHH
Confidence 7799999999987644 467766654 6777887788888999999998
Q ss_pred HHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCcee-ccEEEE---ecceEEEEcCC
Q 014070 179 DIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA---TMDNVVIIGGS 254 (431)
Q Consensus 179 ~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~-~~~v~v---~~~~~~~i~~~ 254 (431)
+|.. .+|++++ +.++++|+|||++|||+++++ ++++++++||+ |+.|++ ++++++++++|
T Consensus 299 ~l~~------~~I~av~-----~v~~~~LerIa~~tGa~ii~~-----l~~l~~~~lG~~~~~v~~~~ig~~~~~~~~g~ 362 (525)
T TIGR02344 299 YLLK------ANISAIR-----RVRKTDNNRIARACGATIVNR-----PEELRESDVGTGCGLFEVKKIGDEYFTFFTEC 362 (525)
T ss_pred HHhH------CCceEEe-----cCCHHHHHHHHHHhCCeEecc-----hhhCCHhhcCCcCCEEEEEEECCeEEEEEEcC
Confidence 8764 3567876 567889999999999999986 88899999999 998886 56789999998
Q ss_pred CChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHc-CCCCCccHHH
Q 014070 255 GELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVAL 333 (431)
Q Consensus 255 ~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~e 333 (431)
+++ ..|||++||+|+.+++|.||+++||++++++++++ ++|||||++|
T Consensus 363 ~~~-------------------------------~~~TIlLrG~t~~~l~E~er~l~DAl~~vk~~~~~~~vvpGGGa~e 411 (525)
T TIGR02344 363 KDP-------------------------------KACTILLRGASKDVLNEIERNLQDAMAVARNVLLEPKLLPGGGATE 411 (525)
T ss_pred CCC-------------------------------CEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCHHH
Confidence 764 46999999999999999999999999999999998 5999999999
Q ss_pred HHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---C-CCCeeEeCCCCccccccccCc
Q 014070 334 LYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---D-SSDLGYNPARGNYVDMFKCGD 407 (431)
Q Consensus 334 l~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~-~~~~G~d~~~g~~~d~~~~gI 407 (431)
+++|.+|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. + +.++|||+.+|+++||++.||
T Consensus 412 ~~ls~~l~~~~~~~~~~~~~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV 491 (525)
T TIGR02344 412 MAVSVYLAKKASKLEGVQQWPYRAVADALEIIPRTLAQNCGVNVIRTLTELRAKHAQEGNCTWGIDGETGKIVDMKEKGI 491 (525)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCCeEeEECCCCccccchhccc
Confidence 9999999999776 899999999999999999999999999999999 999763 2 457999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHhcC
Q 014070 408 VDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 408 ~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
|||+.||+++|+.|+++|++||+|
T Consensus 492 ~dp~~vk~~~l~~A~e~a~~iL~i 515 (525)
T TIGR02344 492 WEPLAVKLQTYKTAIESACMLLRI 515 (525)
T ss_pred eecHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999986
No 23
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.2e-73 Score=595.62 Aligned_cols=400 Identities=31% Similarity=0.428 Sum_probs=348.0
Q ss_pred HhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhcccCC
Q 014070 14 LINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT 92 (431)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~v~ 92 (431)
.+-+|-.+||+|+|++++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|.+.++++|+++++|++
T Consensus 56 Ilkeielehp~akll~eva~~qd~e~GDGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~ 135 (524)
T COG0459 56 ILKEIELEHPGAKLLVEVAKKQDDEAGDGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVS 135 (524)
T ss_pred ehhhhhccCchhHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 4556667999999999999999999999999999999999999999999 999999999999999999999999999998
Q ss_pred CHH-----HHHHHHhhccCCchhHHHHHHHHHHhhcc-----CCceeE-----------------E-------------E
Q 014070 93 TFE-----EIAQVGTTAANGDGEIGELIAKVFEKGWE-----NDLITI-----------------F-------------V 132 (431)
Q Consensus 93 ~~~-----~l~~vA~~s~~~~~~la~li~~A~~~vg~-----~~~i~i-----------------f-------------~ 132 (431)
+.+ ...++++.++++++.+++++++||.+++. ++++.+ | .
T Consensus 136 ~~~~~~~~~~t~v~sk~~~~~~~i~~lv~~Av~~v~~~~~d~~~i~~vk~~gg~~~e~~vveG~~~dkg~~s~~~~~~~~ 215 (524)
T COG0459 136 DSEEELKIAITSVASKSANSDEEIGELVVEAVEKVGKEQSDLDGIIIVKESGGSETELEVVEGMVFDKGYLSPYFMPDKR 215 (524)
T ss_pred cchhhhhhhhheeeeeeccChHHHHHHHHHHHHHhcccccccCCeEEEEecCCCccceEEEeeEEecCCccCCCCCCccc
Confidence 654 44555555666678999999999999998 666554 1 4
Q ss_pred EeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHH
Q 014070 133 LDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAI 212 (431)
Q Consensus 133 l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~ 212 (431)
++||+||++|++|+..+...| ++...+++.|+++++++.+++++..++.|.+++.+++++|+.|+|+|.++++|+|+++
T Consensus 216 ~e~~~Ili~d~~l~~~k~~l~-~e~~i~~~~~l~~i~e~ee~e~l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~I 294 (524)
T COG0459 216 LENPKILLLDKKLEIKKPELP-LEIVISSGKPLLIIAEDEEGEALATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIAI 294 (524)
T ss_pred cccceEEEEccccccccccCc-ceeEecCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhcc
Confidence 799999999999999998888 8888888889999999999999999999999999999999999999999999999999
Q ss_pred HhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhc-c----chHHHHHHhhhc
Q 014070 213 LTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLS-T----SDKLKDRLAKLS 287 (431)
Q Consensus 213 ~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~-~----~~~l~eRl~~ls 287 (431)
+|++++.+++.+ .....+|.|+.|...++.+....|.+. ..+++.. . .+++++|.++ +
T Consensus 295 lt~~~v~~~dl~-----~~l~~~~ga~~v~~~~d~t~~~~G~~~-----------~~~ve~~~~~~~~~~~~~~~~~~-~ 357 (524)
T COG0459 295 LTGRRVKKEDLG-----ERLAKLGGAKIVSVLKDLTTIVLGEGA-----------AGLVEETKTGDYDMEKLQERKAK-A 357 (524)
T ss_pred eecceecchhhH-----HHHHHccCceEEeecccCceeecCccc-----------cceEEEeeccchhhhhhhhhhhc-C
Confidence 999998887642 133456666666665555544444320 1112211 1 1677788888 8
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHHHHhhccC-Cc-hHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NS-DQKIGVQIVQNALKMA 364 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~L~~~~~~-~~-~~~~gi~~~a~AL~~i 364 (431)
|++|||++||+|+.+++|+||++|||||++|+++++| +|||||++|++++..|++|+.+ ++ ++|+|+++|++||+.|
T Consensus 358 ~~~~tI~vrgate~~ldE~er~i~DAL~~~~~ave~g~iV~GGGa~e~~~a~~L~~~~~~~~g~~e~~~i~~~a~Ale~i 437 (524)
T COG0459 358 GGVATILVRGATEVELDEKERRIEDALNVVRAAVEEGKIVPGGGAAEIEAALRLREYAMTVEGGDEQLGIEAFARALEAP 437 (524)
T ss_pred CCeEEEEECCccHhHHHHHHHHHHHHHHHHHHHHhcCCeEeCCCHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 9999999999999999998433 55 9999999999999999
Q ss_pred HHHHHHhcCCChHHH-HHHHhcCC-CCeeEeCCCCcc-ccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 365 AYLIASNAGVDGSVI-DKLLEQDS-SDLGYNPARGNY-VDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 365 p~~La~NaG~d~~~v-~kl~~~~~-~~~G~d~~~g~~-~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+||+|||+||.++ .+|++..+ +++|||+.+|++ .||++.|||||++||+++|++|+++|+|+|+|
T Consensus 438 p~~La~NaG~d~~~v~~~L~~~~~~~~~G~d~~~~~~~~dm~~~GI~dP~~v~~~al~~A~e~a~llL~~ 507 (524)
T COG0459 438 PRQLAENAGLDPIEVLSKLRSAHATTNYGIDAFTGEYEDDMIEAGIIDPLKVKRSALKNAAEAAGLLLTI 507 (524)
T ss_pred HHHHHHhCCCCHHHHHHHHHhcccCCccceeccCCccccchHhccCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 99998654 459999999999 88999999999999999999999999999986
No 24
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=3.4e-71 Score=587.12 Aligned_cols=373 Identities=18% Similarity=0.245 Sum_probs=331.1
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-+++++..+||+++|++++|++||+++||||||+++|+++||++++++++ |+||+.|++||++|.+.++++|+++++|
T Consensus 70 ~TIlk~i~~~hP~akll~~~a~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~ 149 (533)
T PTZ00212 70 ATILKSVWLDNPAAKILVDISKTQDEEVGDGTTSVVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFD 149 (533)
T ss_pred HHHHHhccCcCHHHHHHHHHHHhhhhhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 357889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCC-----HHHHHHHHhhccCC------chhHHHHHHHHHHhhccC---CceeE----------------E---------
Q 014070 91 ITT-----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN---DLITI----------------F--------- 131 (431)
Q Consensus 91 v~~-----~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~---~~i~i----------------f--------- 131 (431)
+++ .++|.++|+++.+. .+.|++++++|+..+... ..+.+ |
T Consensus 150 ~~~~~~~~~~~l~~va~t~l~sk~~~~~~~~l~~i~~~av~~i~~~~~~~~I~i~ki~Ggsi~ds~lv~G~v~~~~~~~~ 229 (533)
T PTZ00212 150 HGSDEEKFKEDLLNIARTTLSSKLLTVEKDHFAKLAVDAVLRLKGSGNLDYIQIIKKPGGTLRDSYLEDGFILEKKIGVG 229 (533)
T ss_pred CCccchhhHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHhccCCccceEEEEecCcCccccEEEEeEEEecccCCC
Confidence 864 46799999855432 467999999999887432 11222 1
Q ss_pred ---EEeCcEEEEecccc--------------CCHHHHHH-----------HHHHHHhcCCcEEEEecCcchhHHHHHHHh
Q 014070 132 ---VLDGALVLIYDTKI--------------SNSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENEVLGDIATD 183 (431)
Q Consensus 132 ---~l~np~Ill~d~~i--------------~~~~~~~~-----------~le~i~~~~~~lvii~~~i~~~al~~l~~n 183 (431)
+++||+|+++|+++ ++++++.. ..+.+.+.|.++++++++|++.++++|..+
T Consensus 230 ~~~~i~n~kIll~~~~Le~~k~~~~~~~~~i~~~~~~~~l~~~E~~~i~~~v~~Ii~~gv~vvv~~~~I~d~a~~~L~~~ 309 (533)
T PTZ00212 230 QPKRLENCKILVANTPMDTDKIKIYGAKVKVDSMEKVAEIEAAEKEKMKNKVDKILAHGCNVFINRQLIYNYPEQLFAEA 309 (533)
T ss_pred CCccccCCcEEEEeCCCCCCcccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC
Confidence 77999999999875 66665432 245677889999999999999999988754
Q ss_pred ccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEE---EecceEEEEcCCCChhhH
Q 014070 184 FTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDI 260 (431)
Q Consensus 184 ~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~---v~~~~~~~i~~~~~~~~i 260 (431)
+|++||.+ ++.+++|||++|||+++++ ++++++++||+|+.|+ +++++++++++|..
T Consensus 310 ------~I~avr~v-----~~~~l~rIa~~tGa~iis~-----l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~---- 369 (533)
T PTZ00212 310 ------GIMAIEHA-----DFDGMERLAAALGAEIVST-----FDTPEKVKLGHCDLIEEIMIGEDKLIRFSGCAK---- 369 (533)
T ss_pred ------CCEEEecC-----CHHHHHHHHHHhCCEEeec-----CCCCCHHHccCCceEEEEEECCeEEEEEEccCC----
Confidence 56899843 3457999999999999986 8889999999999998 67889999998755
Q ss_pred HHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHH
Q 014070 261 QERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKE 339 (431)
Q Consensus 261 ~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~ 339 (431)
+++|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|+++|.+
T Consensus 370 ---------------------------~~~~TI~lrG~t~~~l~E~er~i~DAl~vv~~~i~~~~vVpGGGa~e~~ls~~ 422 (533)
T PTZ00212 370 ---------------------------GEACTIVLRGASTHILDEAERSLHDALCVLSQTVKDTRVVLGGGCSEMLMANA 422 (533)
T ss_pred ---------------------------CCEEEEEEECCChhHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHH
Confidence 3689999999999999999999999999999999997 999999999999999
Q ss_pred HHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHh---cCCCCeeEeCCCCccccccccCcccccccH
Q 014070 340 LDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLE---QDSSDLGYNPARGNYVDMFKCGDVDPLKHV 414 (431)
Q Consensus 340 L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~---~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk 414 (431)
|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++ +++.++|||+.+|++.||++.|||||+.||
T Consensus 423 L~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~g~i~d~~~~gI~dp~~vk 502 (533)
T PTZ00212 423 VEELAKKVEGKKSLAIEAFAKALRQIPTIIADNGGYDSAELVSKLRAEHYKGNKTAGIDMEKGTVGDMKELGITESYKVK 502 (533)
T ss_pred HHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeccCCcccchhhccceecHHHH
Confidence 9999776 899999999999999999999999999999999 99975 345679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC
Q 014070 415 PSEFAKATSMISLKNAI 431 (431)
Q Consensus 415 ~~ai~~A~~~a~~iL~i 431 (431)
+++|+.|+++|++||+|
T Consensus 503 ~~al~~A~e~a~~iL~i 519 (533)
T PTZ00212 503 LSQLCSATEAAEMILRV 519 (533)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999999986
No 25
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=4.7e-71 Score=585.68 Aligned_cols=373 Identities=18% Similarity=0.206 Sum_probs=331.8
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-+++++..+||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|+++++|
T Consensus 66 ~tIlk~l~~~hP~akll~~~a~~q~~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~ 145 (526)
T cd03339 66 ATILEKMDVDHQIAKLLVELSKSQDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADK 145 (526)
T ss_pred HHHHHHhcccCHHHHHHHHHHHhhhhhhcCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 457888999999999999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred CC----CHHHHHHHHhhccCC------chhHHHHHHHHHHhhccC--C-----ceeE------------------E----
Q 014070 91 IT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--D-----LITI------------------F---- 131 (431)
Q Consensus 91 v~----~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~--~-----~i~i------------------f---- 131 (431)
++ +.+.|.++|++|.++ .+.|++++++|+..+... . .|.| |
T Consensus 146 ~~~~~~~~~~l~~ia~tsl~sk~~~~~~~~~s~i~v~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS~~v~Givi~~~~ 225 (526)
T cd03339 146 IEFSPDNKEPLIQTAMTSLGSKIVSRCHRQFAEIAVDAVLSVADLERKDVNFELIKVEGKVGGRLEDTKLVKGIVIDKDF 225 (526)
T ss_pred cCCCcccHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHhhcCCCccchHHeEEEEecCcCHHHcceeeeEEEeccc
Confidence 85 467899999988864 357899999999887431 1 1222 1
Q ss_pred -------EEeCcEEEEeccc-------------cCCHHH-----------HHHHHHHHHhcCCcEEEEecCcchhHHHHH
Q 014070 132 -------VLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDI 180 (431)
Q Consensus 132 -------~l~np~Ill~d~~-------------i~~~~~-----------~~~~le~i~~~~~~lvii~~~i~~~al~~l 180 (431)
.++||+|++++++ ++++++ +.++++.+.+.|.|+|+++++|++.++++|
T Consensus 226 ~~~~m~~~~~n~kI~ll~~~le~~~~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L 305 (526)
T cd03339 226 SHPQMPKEVKDAKIAILTCPFEPPKPKTKHKLDITSVEDYKKLQEYEQKYFREMVEQVKDAGANLVICQWGFDDEANHLL 305 (526)
T ss_pred CCCCCCceecCCCEEEEEecccCCccccceEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCHHHHHHH
Confidence 6789999998752 566665 566788899999999999999999999999
Q ss_pred HHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---e--cceEEEEcCCC
Q 014070 181 ATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---T--MDNVVIIGGSG 255 (431)
Q Consensus 181 ~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~--~~~~~~i~~~~ 255 (431)
..|+ +.+||++ ++++|+|||++|||+++++ ++++++++||+|+.|+. + +++++|+++|+
T Consensus 306 ~~~~------I~av~~v-----~~~~LerIa~~tGa~ii~~-----l~~l~~~~LG~~~~v~~~~ig~~~~~~~~i~g~~ 369 (526)
T cd03339 306 LQNG------LPAVRWV-----GGVEIELIAIATGGRIVPR-----FEDLSPEKLGKAGLVREISFGTTKDKMLVIEGCP 369 (526)
T ss_pred HHCC------CEEEEeC-----CHHHHHHHHHHhCCEEecc-----hhhCChhhcccCceEEEEEecCCCcEEEEEECCC
Confidence 8764 4688864 3456999999999999986 89999999999999874 2 46789999987
Q ss_pred ChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHH
Q 014070 256 ELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALL 334 (431)
Q Consensus 256 ~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el 334 (431)
++ +.+||+|||+|+.+++|+||+++|||+++|+++++| +|||||++||
T Consensus 370 ~~-------------------------------~~~TIllrG~t~~~l~E~er~l~DAl~~~~~~~~~~~vvpGGGa~e~ 418 (526)
T cd03339 370 NS-------------------------------KAVTIFIRGGNKMIIEEAKRSLHDALCVVRNLIRDNRIVYGGGAAEI 418 (526)
T ss_pred CC-------------------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhhCCCEEeCCCHHHH
Confidence 74 578999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccccccccCcc
Q 014070 335 YASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYVDMFKCGDV 408 (431)
Q Consensus 335 ~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~----~~~~~G~d~~~g~~~d~~~~gI~ 408 (431)
++|..|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|+.. ++.++|||+.+|++.||++.|||
T Consensus 419 ~ls~~l~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~ 498 (526)
T cd03339 419 SCSLAVEKAADKCSGIEQYAMRAFADALESIPLALAENSGLNPIETLSEVKARQVKEKNPHLGIDCLGRGTNDMKEQKVF 498 (526)
T ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCeEeeecCCCccCchhhcCce
Confidence 999999999766 889999999999999999999999999999999 999732 34579999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHhcC
Q 014070 409 DPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 409 DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+.||+++|+.|+++|++||+|
T Consensus 499 dp~~vk~~~l~~A~e~a~~iL~i 521 (526)
T cd03339 499 ETLISKKQQILLATQVVKMILKI 521 (526)
T ss_pred ecHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999997
No 26
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1e-70 Score=583.08 Aligned_cols=373 Identities=18% Similarity=0.181 Sum_probs=330.8
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.+++++..+||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|+++++|
T Consensus 70 ~tIlk~l~~~hP~akll~~~a~~qd~~~GDGTttvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~ 149 (532)
T TIGR02343 70 ATILSQMDVDNPIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEE 149 (532)
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred CC----CHHHHHHHHhhccCC------chhHHHHHHHHHHhhccC--Cc-----eeE------------------E----
Q 014070 91 IT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL-----ITI------------------F---- 131 (431)
Q Consensus 91 v~----~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~--~~-----i~i------------------f---- 131 (431)
++ +.+.|.++|+++.+. .+.|++++++|+..+... +. |.+ |
T Consensus 150 ~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ls~i~~~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds~~v~Gi~i~~~~ 229 (532)
T TIGR02343 150 ISDDNNNKEPLIQAAKTSLGSKIVSKCHRRFAEIAVDAVLMVADMERRDVDFDLIKVEGKVGGSLEDTKLIKGIIIDKDF 229 (532)
T ss_pred cCcCCCCHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHhhhhcCCCcCCHHHeeEEEecCCCcccceeEeeEEEecCc
Confidence 75 257899999888763 346899999999887531 11 111 1
Q ss_pred -------EEeCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCcEEEEecCcchhHHHHH
Q 014070 132 -------VLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDI 180 (431)
Q Consensus 132 -------~l~np~Ill~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvii~~~i~~~al~~l 180 (431)
.++||+|++++++ +++++++ .++++.+.+.|+|+||++++|++.++++|
T Consensus 230 ~~~~m~~~~~n~kI~l~~~~le~~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~l~~i~~~g~~lvi~~~~I~~~al~~L 309 (532)
T TIGR02343 230 SHPQMPKEVKDAKIAILTCPFEPPKPKTKHKLDISSVEEYKKLQKYEQQKFAEMIDDIKKSGANIVICQWGFDDEANHLL 309 (532)
T ss_pred CCCCCCeeecCCcEEEEEeeccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCccHHHHHHH
Confidence 6789999998752 5667666 67788999999999999999999999999
Q ss_pred HHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ec--ceEEEEcCCC
Q 014070 181 ATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TM--DNVVIIGGSG 255 (431)
Q Consensus 181 ~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~--~~~~~i~~~~ 255 (431)
..|+ +.+||.+ ++.+|+|||++|||+++++ ++++++++||+|+.|+. +. ++++++++|+
T Consensus 310 ~~~~------i~~v~~~-----~~~~l~~Ia~~tGa~~i~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~i~~~~ 373 (532)
T TIGR02343 310 LQND------LPAVRWV-----GGHELELIAIATGGRIVPR-----FEELSEDKLGKAGLVREISFGTTKDRMLVIEQCK 373 (532)
T ss_pred HHCC------cEEEEcC-----CHHHHHHHHHHhCCEEecc-----cccCCHhHCcccceEEEEEecCCcceEEEEECCC
Confidence 8774 4578854 3456999999999999996 89999999999999874 23 5789999987
Q ss_pred ChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHc-CCCCCccHHHH
Q 014070 256 ELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALL 334 (431)
Q Consensus 256 ~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~el 334 (431)
++ .++||+|||+|+.+++|+||+++||++++|+++++ ++|||||++|+
T Consensus 374 ~~-------------------------------~~~TIllrG~t~~~l~E~er~l~DAl~~v~~~i~~~~vvpGGGa~e~ 422 (532)
T TIGR02343 374 NS-------------------------------KAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLIKNSRIVYGGGAAEI 422 (532)
T ss_pred CC-------------------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHH
Confidence 74 47899999999999999999999999999999998 59999999999
Q ss_pred HHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccccccccCcc
Q 014070 335 YASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYVDMFKCGDV 408 (431)
Q Consensus 335 ~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~----~~~~~G~d~~~g~~~d~~~~gI~ 408 (431)
++|++|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. +..++|||..+|+++||++.|||
T Consensus 423 ~ls~~l~~~~~~~~~~~~~~i~~fa~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~ 502 (532)
T TIGR02343 423 SCSLAVSQEADKYSGVEQYAIRAFADALEEIPMALAENSGLDPIGTLSDLKSLQMKEKNPHLGVDCLGDGTNDMKEQGVF 502 (532)
T ss_pred HHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCccCeeCCCCccccchhccCe
Confidence 999999999776 889999999999999999999999999999999 998742 24578999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHhcC
Q 014070 409 DPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 409 DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+.||.++|+.|+|+|++||+|
T Consensus 503 Dp~~vk~~al~~A~e~a~~iL~i 525 (532)
T TIGR02343 503 ETLIGKKQQIQLATQLVRMILKI 525 (532)
T ss_pred ecHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999986
No 27
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.6e-70 Score=581.26 Aligned_cols=373 Identities=16% Similarity=0.175 Sum_probs=334.7
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.+++++..|||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|+++++|
T Consensus 59 ~tIlk~l~~~hP~akll~~~a~~q~~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~ 138 (522)
T cd03340 59 ATILKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVN 138 (522)
T ss_pred HHHHHHccccCHHHHHHHHHHHHhHhHhCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 457899999999999999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred CCC------HHHHHHHHhhccC------CchhHHHHHHHHHHhhccCC---ceeE------------------E------
Q 014070 91 ITT------FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEND---LITI------------------F------ 131 (431)
Q Consensus 91 v~~------~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~~~---~i~i------------------f------ 131 (431)
+++ .+.+.++|+++.+ ++++|++++++|+.++++++ .|.+ |
T Consensus 139 ~~~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~l~~l~~~A~~~v~~~~~~~~I~i~~i~Ggs~~ds~lv~Giv~~k~~~~ 218 (522)
T cd03340 139 IDKEDKEEQRELLEKCAATALNSKLIASEKEFFAKMVVDAVLSLDDDLDLDMIGIKKVPGGSLEDSQLVNGVAFKKTFSY 218 (522)
T ss_pred cCcccccccHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHhcccCChhHheEeeecCCChhhceeeeeEEEecccCc
Confidence 864 4569999988865 46899999999999998765 2332 1
Q ss_pred --------EEeCcEEEEeccc-------------cCCHHH-----------HHHHHHHHHhcCCcEEEEecCcchhHHHH
Q 014070 132 --------VLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGD 179 (431)
Q Consensus 132 --------~l~np~Ill~d~~-------------i~~~~~-----------~~~~le~i~~~~~~lvii~~~i~~~al~~ 179 (431)
.++||+|+++|++ ++++++ +.+.++.+.+.|.++++++++|++.++++
T Consensus 219 ~~~~~~~~~~~n~kIll~~~~Le~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~vvl~~~~i~d~a~~~ 298 (522)
T cd03340 219 AGFEQQPKKFKNPKILLLNVELELKAEKDNAEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSGANVVLSKLPIGDLATQY 298 (522)
T ss_pred cccccCCccccCCeEEEEeCCCCCCccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcHHHHHH
Confidence 5689999999976 455544 45556778889999999999999999999
Q ss_pred HHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEE---EecceEEEEcCCCC
Q 014070 180 IATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGE 256 (431)
Q Consensus 180 l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~---v~~~~~~~i~~~~~ 256 (431)
|..+ ++++++. .++++|+|||++|||+++++ ++++++++||+|+.|+ +++++++++.+|..
T Consensus 299 l~~~------~I~~~~~-----v~~~~l~rIa~~tGa~ii~~-----l~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~ 362 (522)
T cd03340 299 FADR------DIFCAGR-----VPEEDLKRVAQATGGSIQTT-----VSNITDDVLGTCGLFEERQVGGERYNIFTGCPK 362 (522)
T ss_pred HHHC------CcEEEEe-----CCHHHHHHHHHHHCCEEeec-----cccCCccccccceEEEEEEECCEEEEEEECCCC
Confidence 8865 3467663 45678999999999999987 8899999999999998 57788999999866
Q ss_pred hhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHH
Q 014070 257 LVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLY 335 (431)
Q Consensus 257 ~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~ 335 (431)
+ ..+||++||+|+..++|.||+++||++++|+++++| +|||||++|++
T Consensus 363 ~-------------------------------~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGG~~E~~ 411 (522)
T cd03340 363 A-------------------------------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRAIKNDSVVAGGGAIEME 411 (522)
T ss_pred C-------------------------------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHH
Confidence 3 468999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC-CCeeEeCCCCccccccccCccc
Q 014070 336 ASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS-SDLGYNPARGNYVDMFKCGDVD 409 (431)
Q Consensus 336 ~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~-~~~G~d~~~g~~~d~~~~gI~D 409 (431)
++.+|++++.. ++++++++++|++||+.||++||+|||+|+.++ .+|++. ++ .++|||+.+|++.||++.||||
T Consensus 412 ls~~l~~~~~~~~~~~~~~~~~fa~aL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~d 491 (522)
T cd03340 412 LSKYLRDYSRTIAGKQQLVINAFAKALEIIPRQLCDNAGFDATDILNKLRQKHAQGGGKWYGVDINNEGIADNFEAFVWE 491 (522)
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCCeeeeeCCCCcccchhhcCceE
Confidence 99999999776 899999999999999999999999999999999 999863 33 5799999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHhcC
Q 014070 410 PLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 410 P~~vk~~ai~~A~~~a~~iL~i 431 (431)
|+.||+++++.|+|+|++||+|
T Consensus 492 p~~vk~~~i~~A~e~a~~iL~i 513 (522)
T cd03340 492 PSLVKINALTAATEAACLILSV 513 (522)
T ss_pred cHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999986
No 28
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=9.5e-71 Score=583.19 Aligned_cols=374 Identities=15% Similarity=0.173 Sum_probs=331.2
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhcc-
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQAR- 89 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~- 89 (431)
+.++.++..+||+++|++++|++||+++||||||+++|+++||++++++++ |+||+.|++||+.|.+.++++|++++.
T Consensus 61 ~tIlk~i~~~hP~akll~e~a~sqd~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~ 140 (531)
T TIGR02346 61 ATILRELEVQHPAAKLLVMASEMQENEIGDGTNLVIVLAGELLDKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVW 140 (531)
T ss_pred HHHHHhccccCHHHHHHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 457788899999999999999999999999999999999999999999999 999999999999999999999999986
Q ss_pred cCCC---HHHHHHHHhhccC-----CchhHHHHHHHHHHhhccCC--ce-----eE------------------E-----
Q 014070 90 KITT---FEEIAQVGTTAAN-----GDGEIGELIAKVFEKGWEND--LI-----TI------------------F----- 131 (431)
Q Consensus 90 ~v~~---~~~l~~vA~~s~~-----~~~~la~li~~A~~~vg~~~--~i-----~i------------------f----- 131 (431)
++++ .+.+.++|.++.+ +++.|++++++|+.++++++ .+ .+ |
T Consensus 141 ~~~~~~~~~~l~~i~~tsl~sK~~~~~~~ls~l~~~Ai~~v~~~~~~~~~~~~I~i~ki~G~s~~ds~li~Gi~~~~~~~ 220 (531)
T TIGR02346 141 EVEDVRNKKELIKALKASISSKQYGNEDFLAQLVAKACSTVMPKNPENFNVDNIRVSKIMGGSISNSEVLKGMVFNREAE 220 (531)
T ss_pred cCCCCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHHHHhhcCCCcCChhHeeEEEecCCChhhceeEeeeEEeccCC
Confidence 7643 6789999765552 47899999999999998654 22 22 1
Q ss_pred ----EEeCcEEEEeccc-------------cCCHH-----------HHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHh
Q 014070 132 ----VLDGALVLIYDTK-------------ISNSN-----------VIRQASLPCMMQGQSLLVVAEDVENEVLGDIATD 183 (431)
Q Consensus 132 ----~l~np~Ill~d~~-------------i~~~~-----------~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n 183 (431)
.++||+|++++++ +++++ ++.++++.+.+.|+|+|+++++|++.++++|..
T Consensus 221 ~~~k~i~n~kI~l~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~e~~~i~~~l~~i~~~g~~lvi~~~~I~d~~~~~l~~- 299 (531)
T TIGR02346 221 GSVKRVKNAKVAVFSCPLDTATTETKGTVLIHNAEELLNYSKGEENQIEAYIKAIADSGVNVIVTGGSVGDMALHYCEK- 299 (531)
T ss_pred CCceeccCCCEEEEecCcCCCcccCceEEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCCcCHHHHHHHHH-
Confidence 6789999999764 33433 345678889999999999999999999997763
Q ss_pred ccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ecceEEEEcCCCChhhH
Q 014070 184 FTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGELVDI 260 (431)
Q Consensus 184 ~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~~~~~~i~~~~~~~~i 260 (431)
.+|++||+|+++ +|+|||++|||+++++ ++++++++||+|+.|++ ++++++++.++..
T Consensus 300 -----~~I~av~~~~~~-----~l~~Ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~i~~~~~---- 360 (531)
T TIGR02346 300 -----YNIMVLKIPSKF-----ELRRLCKTVGATPLAR-----LGAPQPEEIGYVDSVYVSEIGGQKVTVFKQENG---- 360 (531)
T ss_pred -----CCcEEEecCCHH-----HHHHHHHHHCCEEecc-----cccCCHhHccccceEEEEEECCEEEEEEEccCC----
Confidence 467999988766 5899999999999986 78899999999999976 4567888887642
Q ss_pred HHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHH
Q 014070 261 QERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKE 339 (431)
Q Consensus 261 ~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~ 339 (431)
.++++||+|||+|+.+++|+||+++||||++|+++++| +|||||++||+++.+
T Consensus 361 --------------------------~~~~~tI~lrG~t~~~l~E~er~i~DAl~~~k~ai~~~~vVpGGG~~e~~ls~~ 414 (531)
T TIGR02346 361 --------------------------DSKISTIILRGSTKNLLDDIERAIDDGVNVIKALVKDNRFLPGAGATEIELALR 414 (531)
T ss_pred --------------------------CCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHH
Confidence 25789999999999999999999999999999999999 999999999999999
Q ss_pred HHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCc--cccccccCcccccc
Q 014070 340 LDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGN--YVDMFKCGDVDPLK 412 (431)
Q Consensus 340 L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~--~~d~~~~gI~DP~~ 412 (431)
|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+ ++||++.|||||+.
T Consensus 415 L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~~~~~i~d~~~~gI~dp~~ 494 (531)
T TIGR02346 415 LKKYANKLPGLDQYAIKKFAEAFEIIPRTLAENAGLNPNEVIPKLYAAHKKGNTSSGIDIEAESDGVKDASEAGIYDNLA 494 (531)
T ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeeeCCCccccChhhcCceEcHH
Confidence 9999766 899999999999999999999999999999999 999763 4557899999999 59999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcC
Q 014070 413 HVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 413 vk~~ai~~A~~~a~~iL~i 431 (431)
||+++|++|+|+|++||+|
T Consensus 495 vk~~~l~~A~e~a~~iL~i 513 (531)
T TIGR02346 495 TKKWAIKLATEAAVTVLRV 513 (531)
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999987
No 29
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.3e-70 Score=578.86 Aligned_cols=373 Identities=19% Similarity=0.243 Sum_probs=329.6
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.++++|..|||+++|++++|++||+++||||||+++|+++||++++++++ |+||+.|++||++|.+.++++|+++++|
T Consensus 59 ~tIlk~l~i~hP~akll~~~a~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~ 138 (519)
T TIGR02341 59 ATILKSIGVDNPAAKVLVDMSKVQDDEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSID 138 (519)
T ss_pred HHHHHHccCcChHHHHHHHHHHHhHhhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 467899999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCC-----HHHHHHHHhhccCC------chhHHHHHHHHHHhhccC---CceeE----------------E---------
Q 014070 91 ITT-----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN---DLITI----------------F--------- 131 (431)
Q Consensus 91 v~~-----~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~---~~i~i----------------f--------- 131 (431)
+++ .++|.++|+++.+. .+.|+++.++|+..+... ..+.+ |
T Consensus 139 ~~~~~~~~~~~L~~ia~t~l~ski~~~~~~~~s~l~~~av~~i~~~~~~~~i~i~k~~G~s~~~s~l~~G~v~~~~~~~~ 218 (519)
T TIGR02341 139 NGSDKTKFRDDLLNIARTTLSSKILSQHKDHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSLNDSYLDEGFLLEKKIGVN 218 (519)
T ss_pred ccCcccccHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCChhheEEEEccCCCcccceEEeeEEEeccCCCC
Confidence 853 46799999877763 356899999999887431 11222 1
Q ss_pred ---EEeCcEEEEeccccCC--------------HHHHH-----------HHHHHHHhcCCcEEEEecCcchhHHHHHHHh
Q 014070 132 ---VLDGALVLIYDTKISN--------------SNVIR-----------QASLPCMMQGQSLLVVAEDVENEVLGDIATD 183 (431)
Q Consensus 132 ---~l~np~Ill~d~~i~~--------------~~~~~-----------~~le~i~~~~~~lvii~~~i~~~al~~l~~n 183 (431)
+++||+|+++|++++. ++++. ..++.+.+.|.+++++++.|++.++++|..+
T Consensus 219 ~~~~~~n~~Ili~~~~Le~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~I~~~g~~~v~~~~~I~~~~~~~l~~~ 298 (519)
T TIGR02341 219 QPKRIENAKILIANTPMDTDKVKVFGSRVRVDSTAKVAELEAAEKEKMKEKVEKILKHNINCFINRQLIYNYPEQLFADA 298 (519)
T ss_pred CceeeccccEEEEecCCCCCccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCcCCHHHHHHHHHC
Confidence 7799999999986643 33332 2255788899999999999999999988754
Q ss_pred ccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ecceEEEEcCCCChhhH
Q 014070 184 FTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGELVDI 260 (431)
Q Consensus 184 ~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~~~~~~i~~~~~~~~i 260 (431)
+|++++.|+++ +|+|||++|||+++++ ++++++++||+|+.|+. ++++++++.+|++
T Consensus 299 ------~I~~v~~~~~~-----~l~~ia~~tGa~ii~~-----~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~---- 358 (519)
T TIGR02341 299 ------GVMAIEHADFE-----GIERLALVTGGEIVST-----FDHPELVKLGSCDLIEEIMIGEDKLLKFSGVKL---- 358 (519)
T ss_pred ------CcEEEecCCHH-----HHHHHHHHhCCEEecc-----cccCCccccccCceEEEEEECCEEEEEEEcCCC----
Confidence 67899988644 6999999999999996 88899999999998874 5678999998866
Q ss_pred HHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHc-CCCCCccHHHHHHHHH
Q 014070 261 QERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKE 339 (431)
Q Consensus 261 ~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~el~~s~~ 339 (431)
+++|||++||+|+.+++|.||+++||++++|+++++ ++|||||++|++++..
T Consensus 359 ---------------------------~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~ 411 (519)
T TIGR02341 359 ---------------------------GEACTIVLRGATQQILDESERSLHDALCVLSQTVKESRTVLGGGCSEMLMSKA 411 (519)
T ss_pred ---------------------------CCEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHH
Confidence 368999999999999999999999999999999998 5999999999999999
Q ss_pred HHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccH
Q 014070 340 LDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHV 414 (431)
Q Consensus 340 L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~vk 414 (431)
|++++.. ++++|+++++|++||+.|||+||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.||
T Consensus 412 l~~~~~~~~~~~~~~i~~~a~Ale~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI~dp~~vk 491 (519)
T TIGR02341 412 VAVEAQKVPGKEALAVEAFARALRQLPTIIADNAGFDSAELVAQLRAAHYNGNHTMGLDMEEGEIADMRKLGIIESYKVK 491 (519)
T ss_pred HHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceecCCCcccchhhccceEcHHHH
Confidence 9999776 899999999999999999999999999999999 999763 45578999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC
Q 014070 415 PSEFAKATSMISLKNAI 431 (431)
Q Consensus 415 ~~ai~~A~~~a~~iL~i 431 (431)
+++|+.|+++|++||+|
T Consensus 492 ~~~l~~A~e~a~~iL~i 508 (519)
T TIGR02341 492 RAVVSSAAEAAEVILRV 508 (519)
T ss_pred HHHHHHHHHHHHHHHhH
Confidence 99999999999999986
No 30
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=9e-70 Score=575.20 Aligned_cols=373 Identities=15% Similarity=0.138 Sum_probs=330.7
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.+++++..+||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|+++++|
T Consensus 60 ~TIlk~i~~~hP~a~ll~~~a~~q~~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~ 139 (522)
T TIGR02345 60 ATILKLLDIVHPAAKTLVDIAKSQDSEVGDGTTSVVILAGELLKEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVT 139 (522)
T ss_pred HHHHHHhcccChHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC-----CHHHHHHHHhhccC------CchhHHHHHHHHHHhhccCC-------ceeE---------------E------
Q 014070 91 IT-----TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEND-------LITI---------------F------ 131 (431)
Q Consensus 91 v~-----~~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~~~-------~i~i---------------f------ 131 (431)
++ +.+.+.++|++|.+ ++++|++++++|+.++++++ ++++ |
T Consensus 140 ~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~l~~l~~~A~~~v~~~~~~~~~I~i~ki~Ggs~~ds~~v~Giv~~~~~~~ 219 (522)
T TIGR02345 140 IDEVKGEQREVLEKCAATALNSKLIAHEKEFFSKMIVDAVLQLDIDDLDLKLIGVKKVQGGSLQDSVLVNGVAFKKTFSY 219 (522)
T ss_pred cCCcccccHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhhccCChhHheEEeecCCCHHhcceecceEEecccCc
Confidence 87 45789999998876 57899999999999997642 2222 1
Q ss_pred --------EEeCcEEEEeccccC-------------CHHHH-----------HHHHHHHHhcCCcEEEEecCcchhHHHH
Q 014070 132 --------VLDGALVLIYDTKIS-------------NSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGD 179 (431)
Q Consensus 132 --------~l~np~Ill~d~~i~-------------~~~~~-----------~~~le~i~~~~~~lvii~~~i~~~al~~ 179 (431)
+++||+|+++|+++. +++++ ...++.+.+.|.+++++.++|++.++++
T Consensus 220 ~~~~~~~~~~~n~kIll~~~~Le~~~~~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~i~d~~~~~ 299 (522)
T TIGR02345 220 AGFEQQPKKFANPKILLLNVELELKAEKDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLPIGDLATQY 299 (522)
T ss_pred cccccCCceeccceEEEEecCcccCccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCccHHHHHH
Confidence 678999999997653 33443 3335567778999999999999999998
Q ss_pred HHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ecceEEEEcCCCC
Q 014070 180 IATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGE 256 (431)
Q Consensus 180 l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~~~~~~i~~~~~ 256 (431)
|..+ +|.+++. ...+++++++++|||+++++ ++++++++||+|+.|+. ++++++++.||++
T Consensus 300 L~~~------~I~~~~~-----v~~~dl~ria~~tga~ii~~-----~~~l~~~~LG~~~~ie~~~~~~~r~~~~~g~~~ 363 (522)
T TIGR02345 300 FADH------NIFCAGR-----VSDEDLKRVVKACGGSIQST-----TSDLEADVLGTCALFEERQIGSERYNYFTGCPH 363 (522)
T ss_pred HHHC------CcEEEec-----CCHHHHHHHHHHhCCeEEcc-----hhhCChhhccCCceEEEEEECCeEEEEEEcCCC
Confidence 8754 4567764 45567999999999999987 88999999999999875 4678899988765
Q ss_pred hhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHc-CCCCCccHHHHH
Q 014070 257 LVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLY 335 (431)
Q Consensus 257 ~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~el~ 335 (431)
+ ++|||++||+|+.+++|+||+++||++++|+++++ |+|||||++|++
T Consensus 364 ~-------------------------------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGG~~e~~ 412 (522)
T TIGR02345 364 A-------------------------------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRALKARKIVAGGGAIEME 412 (522)
T ss_pred C-------------------------------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHH
Confidence 3 47999999999999999999999999999999997 699999999999
Q ss_pred HHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccc
Q 014070 336 ASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDP 410 (431)
Q Consensus 336 ~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP 410 (431)
++.+|++++.. ++++++++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||
T Consensus 413 ls~~l~~~~~~~~~~~~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~~~i~d~~~~gI~dp 492 (522)
T TIGR02345 413 LSKILREHSKKIDGKQQLIIEAFAKALEIIPRSLCENAGFDSIEILNKLRSRHAKGGKWYGVDINTEDIGDNFENFVWEP 492 (522)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceeCCCCcccchhhcCceEc
Confidence 99999998766 899999999999999999999999999999999 999763 4457999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHhcC
Q 014070 411 LKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 411 ~~vk~~ai~~A~~~a~~iL~i 431 (431)
+.||+++|++|+++|++||+|
T Consensus 493 ~~vk~~~l~~A~e~a~~iL~i 513 (522)
T TIGR02345 493 LLVKKNALKAAFEAACTILSI 513 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999986
No 31
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=7e-70 Score=569.57 Aligned_cols=360 Identities=17% Similarity=0.210 Sum_probs=324.1
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.+++++..+||+++|++++|.+||+++||||||+++|+++||+++.++++ |+||+.|++||+.|.+.++++|++++.+
T Consensus 51 ~tIlk~l~~~hP~a~ll~~~a~~~~~~~GDGTTt~vvL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~ 130 (472)
T cd03341 51 ATILRELEVQHPAAKLLVMASQMQEEEIGDGTNLVVVLAGELLEKAEELLRMGLHPSEIIEGYEKALKKALEILEELVVY 130 (472)
T ss_pred HHHHHhccccCHHHHHHHHHHHHHhhhhCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 567899999999999999999999999999999999999999999999999 9999999999999999999999999865
Q ss_pred -CC---CHHHHHHHHhhcc-----CCchhHHHHHHHHHHhhccC--Ccee-----E------------------E-----
Q 014070 91 -IT---TFEEIAQVGTTAA-----NGDGEIGELIAKVFEKGWEN--DLIT-----I------------------F----- 131 (431)
Q Consensus 91 -v~---~~~~l~~vA~~s~-----~~~~~la~li~~A~~~vg~~--~~i~-----i------------------f----- 131 (431)
++ +.+.+.+++.++. ++++.+++++++|+.+++++ |.++ | |
T Consensus 131 ~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l~~l~~~a~~~~~~~~~~~~~~~~i~i~ki~Gg~~~ds~lv~Giv~~~~~~ 210 (472)
T cd03341 131 KIEDLRNKEEVSKALKTAIASKQYGNEDFLSPLVAEACISVLPENIGNFNVDNIRVVKILGGSLEDSKVVRGMVFKREPE 210 (472)
T ss_pred ccCCccCHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHhhccCCcCChhHeEEEEecCCCcccceEEeeEEEccccC
Confidence 53 3566778776654 34779999999999999865 4332 2 1
Q ss_pred ----EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhH
Q 014070 132 ----VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIM 207 (431)
Q Consensus 132 ----~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~l 207 (431)
+++||+|+++|++++. |.|+|+++++|+++++++|.. .+|+++|+|+ +++|
T Consensus 211 ~~~~~~~n~~Ili~~~~Le~--------------g~~lvi~~~~I~d~al~~l~~------~~I~av~~~~-----~~~L 265 (472)
T cd03341 211 GSVKRVKKAKVAVFSCPFDI--------------GVNVIVAGGSVGDLALHYCNK------YGIMVIKINS-----KFEL 265 (472)
T ss_pred CCceeccCCcEEEEeccccC--------------CCeEEEECCCCCHHHHHHHHH------CCeEEEEeCC-----HHHH
Confidence 7789999999998887 789999999999999998653 4689999885 4569
Q ss_pred HHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEec---ceEEEEcCCCChhhHHHHHHHHHHHhhhccchHHHHHHh
Q 014070 208 EDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATM---DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLA 284 (431)
Q Consensus 208 e~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~---~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~ 284 (431)
+|||++|||+++++ ++++++++||+|+.|++.+ ++++++.+|++.
T Consensus 266 e~Ia~~tGa~ii~~-----~~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~--------------------------- 313 (472)
T cd03341 266 RRLCRTVGATPLPR-----LGAPTPEEIGYCDSVYVEEIGDTKVVVFRQNKED--------------------------- 313 (472)
T ss_pred HHHHHHhCCEEecc-----cccCCHhHCCCceEEEEEEECCeeEEEEEccCCC---------------------------
Confidence 99999999999987 7888899999999998754 889999887551
Q ss_pred hhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHHHHhhccC-CchHHHHHHHHHHHHH
Q 014070 285 KLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALK 362 (431)
Q Consensus 285 ~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~ 362 (431)
++++||++||+|+.+++|+||+++||++++|+++++| +|||||++|++++.+|++++.. ++++++++++|++||+
T Consensus 314 ---~~~~TI~lrG~t~~~l~E~er~i~DAl~~~~~ai~~~~vVpGGG~~e~~ls~~l~~~~~~~~~~~~~~~~~~a~al~ 390 (472)
T cd03341 314 ---SKIATIVLRGATQNILDDVERAIDDGVNVFKSLTKDGRFVPGAGATEIELAKKLKEYGEKTPGLEQYAIKKFAEAFE 390 (472)
T ss_pred ---CCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCcCHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHH
Confidence 3679999999999999999999999999999999999 9999999999999999998766 8899999999999999
Q ss_pred HHHHHHHHhcCCChHHH-HHHHh---cCCCCeeEeCCCC--ccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 363 MAAYLIASNAGVDGSVI-DKLLE---QDSSDLGYNPARG--NYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 363 ~ip~~La~NaG~d~~~v-~kl~~---~~~~~~G~d~~~g--~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
.||++|++|||+|+.++ .+|+. +++.++|||+.+| ++.||++.|||||+.||+++|++|+|+|++||+|
T Consensus 391 ~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~g~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~i 465 (472)
T cd03341 391 VVPRTLAENAGLDATEVLSELYAAHQKGNKSAGVDIESGDEGTKDAKEAGIFDHLATKKWAIKLATEAAVTVLRV 465 (472)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHccCCeeeeeccCCCCCccChhhccceecHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999 99875 3456799999999 9999999999999999999999999999999997
No 32
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=5.4e-70 Score=571.53 Aligned_cols=356 Identities=13% Similarity=0.154 Sum_probs=322.5
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.++.++..|||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||++|.+.++++|+++++|
T Consensus 59 ~tIlk~l~~~hP~a~ll~~~a~~q~~~~GDGTtt~vvL~~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~ 138 (480)
T cd03337 59 NAILREIDVAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEILAVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIP 138 (480)
T ss_pred HHHHHhccccChHHHHHHHHHHhHHHHhCCCcchhHhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC--CHHHHHHHHhhccCC------chhHHHHHHHHHHhhccC--Cc---------eeE------------------E--
Q 014070 91 IT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL---------ITI------------------F-- 131 (431)
Q Consensus 91 v~--~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~--~~---------i~i------------------f-- 131 (431)
++ +.+.+.++|.++.++ ++.+++++++|+..++++ +. |.| |
T Consensus 139 ~~~~~~~~l~~i~~t~l~sK~~~~~~~~ls~lv~~Ai~~v~~~~~~~~~~id~~~~I~i~ki~Ggs~~ds~li~Gvvi~k 218 (480)
T cd03337 139 VDVNDRAQMLKIIKSCIGTKFVSRWSDLMCNLALDAVKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDSRVLDGVMLNK 218 (480)
T ss_pred cccCCHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHhhccccCCCCCcCChhhceEEEEecCCCHHhcccccceEEec
Confidence 87 678899999988863 468999999999999754 21 233 1
Q ss_pred ---------EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccc
Q 014070 132 ---------VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAED 202 (431)
Q Consensus 132 ---------~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~ 202 (431)
+++||+|+++++++.. +++++++|++.++++|..| +|++|+. .
T Consensus 219 ~~~~~~m~~~~~n~kIlll~~~Le~-----------------lvi~~k~I~d~al~~L~~~------~I~~v~~-----v 270 (480)
T cd03337 219 DVTHPKMRRRIENPRIVLLDCPLEY-----------------LVITEKGVSDLAQHYLVKA------GITALRR-----V 270 (480)
T ss_pred cCCCCCCCcEecCCCEEEEecCcce-----------------EEEeCCCccHHHHHHHHHC------CcEEEEe-----C
Confidence 8899999999998765 8899999999999999876 5688883 5
Q ss_pred hhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceec-cEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHhhhccchH
Q 014070 203 RKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSC-KRVIA---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDK 278 (431)
Q Consensus 203 r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~-~~v~v---~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~ 278 (431)
++++|+|||++|||+++++ ++++++++||+| +.++. ++++++++++|+++
T Consensus 271 ~~~~L~rIa~~tGa~ii~~-----~~~l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~--------------------- 324 (480)
T cd03337 271 RKTDNNRIARACGATIVNR-----PEELTESDVGTGAGLFEVKKIGDEYFTFITECKDP--------------------- 324 (480)
T ss_pred CHHHHHHHHHHHCCEEecc-----hhhCCHHHcCCcccEEEEEEeCCeEEEEEEcCCCC---------------------
Confidence 6788999999999999987 788999999994 55543 45778999998764
Q ss_pred HHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHc-CCCCCccHHHHHHHHHHHhhccC-CchHHHHHHH
Q 014070 279 LKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQI 356 (431)
Q Consensus 279 l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~ 356 (431)
+.+||++||+|+.+++|.||+++||++++++++++ ++|||||++||++|.+|++++.. ++++|+++++
T Consensus 325 ----------~~~TIllrG~t~~~l~e~er~l~DAl~v~~~~~~~~~~vpGGGa~E~~ls~~l~~~~~~~~~~~~~~~~~ 394 (480)
T cd03337 325 ----------KACTILLRGASKDVLNEVERNLQDAMAVARNIILNPKLVPGGGATEMAVSHALSEKAKSIEGVEQWPYKA 394 (480)
T ss_pred ----------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHhhcCCCHHHHHHHH
Confidence 57999999999999999999999999999999998 59999999999999999998876 8999999999
Q ss_pred HHHHHHHHHHHHHHhcCCChHHH-HHHHhc---C-CCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 357 VQNALKMAAYLIASNAGVDGSVI-DKLLEQ---D-SSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 357 ~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~-~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
|++||+.||++||+|||+|+.++ .+|++. + +.++|+|+.+|++.||++.|||||+.||+++|+.|+++|++||+|
T Consensus 395 ~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~i 474 (480)
T cd03337 395 VASALEVIPRTLAQNCGANVIRTLTELRAKHAQGENSTWGIDGETGDIVDMKELGIWDPLAVKAQTYKTAIEAACMLLRI 474 (480)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCCeECeeccCCCcccchhccCeEcHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999 999863 3 457999999999999999999999999999999999999999997
No 33
>KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.9e-70 Score=529.27 Aligned_cols=368 Identities=15% Similarity=0.147 Sum_probs=329.1
Q ss_pred hcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhcccCC--C
Q 014070 17 TTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKIT--T 93 (431)
Q Consensus 17 ~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~v~--~ 93 (431)
-+.+-||+++.++++|++||.||||||||||+||+|+|+++..+++ |+||+-|+++|++|...+++.|++++..++ +
T Consensus 68 lldivhPaaktlVdia~sQDaEVGDGTTSVv~la~E~lk~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~ 147 (543)
T KOG0361|consen 68 LLDIVHPAAKTLVDIARSQDAEVGDGTTSVVLLAAEFLKEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSS 147 (543)
T ss_pred HHhhcChhHHHHHHHHhhccccccCCceeEeeeHHHHHHhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccc
Confidence 3456799999999999999999999999999999999999999999 999999999999999999999999998876 2
Q ss_pred ----HHHHHHHHhhccC------CchhHHHHHHHHHHhhccCC---cee---E-------------------E-------
Q 014070 94 ----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEND---LIT---I-------------------F------- 131 (431)
Q Consensus 94 ----~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~~~---~i~---i-------------------f------- 131 (431)
++.|.++|.|+.+ ..++|++++++|+.++..+. .|- | |
T Consensus 148 ~~~~r~lL~KcA~T~lsSKlI~~ek~fF~~MvVDAV~~ld~~l~~~mIGIKKV~GG~~~dS~lv~GVAFkKtFsYAGfEq 227 (543)
T KOG0361|consen 148 KTELRELLEKCAATALSSKLIRQEKEFFAKMVVDAVLTLDNDLDLNMIGIKKVPGGAMEDSLLVNGVAFKKTFSYAGFEQ 227 (543)
T ss_pred hhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHhhccccchhhcceeecCCCccchhhhccceeeeehccccchhh
Confidence 3567888877664 36799999999999887431 122 2 2
Q ss_pred ---EEeCcEEEEecc-------------ccCCHHHHHH-----------HHHHHHhcCCcEEEEecCcchhHHHHHHHhc
Q 014070 132 ---VLDGALVLIYDT-------------KISNSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENEVLGDIATDF 184 (431)
Q Consensus 132 ---~l~np~Ill~d~-------------~i~~~~~~~~-----------~le~i~~~~~~lvii~~~i~~~al~~l~~n~ 184 (431)
++.||+|+++|. ++.++++++. .|+++..+|+++|+..-.|.|.+.++|+..
T Consensus 228 qPKk~~NpkIl~LnvELElKaEkdNAEiRv~~v~eyQ~iVDAEW~Ii~~KL~ki~~sGAnVVLSkLpIGD~ATQyFAdr- 306 (543)
T KOG0361|consen 228 QPKKFLNPKILLLNVELELKAEKDNAEIRVDNVEEYQAIVDAEWNIIYDKLDKIHESGANVVLSKLPIGDLATQYFADR- 306 (543)
T ss_pred CccccCCceEEEEeeeeeecccccCceeecCCHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEecccchHHHHHHhhcc-
Confidence 899999999985 3566776654 478899999999888779999999988743
Q ss_pred cCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEE---EecceEEEEcCCCChhhHH
Q 014070 185 TCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQ 261 (431)
Q Consensus 185 ~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~---v~~~~~~~i~~~~~~~~i~ 261 (431)
+.| || |++..++|.|+..+|||++.++ .+++.++.||+|..++ +++++|.+|+||+..
T Consensus 307 --diF--CA------GRV~~eDl~Rv~~acGGsi~tt-----~~~i~~~~LG~C~~FeE~QvG~eRyN~Fegcp~a---- 367 (543)
T KOG0361|consen 307 --DIF--CA------GRVPEEDLNRVMQACGGSIQTT-----VSDIKEEVLGTCALFEERQVGGERYNLFEGCPKA---- 367 (543)
T ss_pred --Cce--ec------CcCCHHHHHHHHHhcCcchhhh-----hhhcchhhcchhhhHHHHhhcchhhhhhcCCCcc----
Confidence 333 43 6778899999999999999986 7899999999999987 589999999999873
Q ss_pred HHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHHH
Q 014070 262 ERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKEL 340 (431)
Q Consensus 262 ~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~L 340 (431)
++||+++||+.++.++|.+|++|||++++|.|++.. +|+|||++||++|+.|
T Consensus 368 ---------------------------ktcTliLRGgaeqfieE~eRSlHDAImIVrralkn~~vVaGGGaiEMElSk~l 420 (543)
T KOG0361|consen 368 ---------------------------KTCTLILRGGAEQFIEETERSLHDAIMIVRRALKNDSVVAGGGAIEMELSKYL 420 (543)
T ss_pred ---------------------------ceeEEEEeccHHHHHHHHhhhhhhHHHHHHHHhccCcEeeCCceeeehHHHHH
Confidence 589999999999999999999999999999999965 9999999999999999
Q ss_pred HhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHH
Q 014070 341 DKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVP 415 (431)
Q Consensus 341 ~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~ 415 (431)
++|+.+ .|++|+-+.+|++|||.|||+||+|+|+|..++ +|||.. ++.|||+|..++.+.|+++.+||||+.||+
T Consensus 421 Rd~S~ti~gK~q~~i~A~akalEvIPrqLc~NaGfDa~~ilnkLR~rHA~G~~w~Gvdi~~e~i~dn~~~~VwEP~~VK~ 500 (543)
T KOG0361|consen 421 RDYSRTIAGKQQLFINAYAKALEVIPRQLCDNAGFDATNILNKLRQRHAQGEKWYGVDINTEGIADNFEKFVWEPSIVKI 500 (543)
T ss_pred HHhhcccCcHHHHHHHHHHHHHHHhHHHHhhhcCCcHHHHHHHHHHHhhcCCceeeeeecccchhhHHHhhccChHHHHH
Confidence 999999 999999999999999999999999999999999 999864 788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC
Q 014070 416 SEFAKATSMISLKNAI 431 (431)
Q Consensus 416 ~ai~~A~~~a~~iL~i 431 (431)
+++..|+|+|++||+|
T Consensus 501 Nai~aateAa~lIlsv 516 (543)
T KOG0361|consen 501 NAITAATEAACLILSV 516 (543)
T ss_pred HHHHHHHHhhhheEeh
Confidence 9999999999999975
No 34
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=1.2e-67 Score=552.26 Aligned_cols=356 Identities=27% Similarity=0.367 Sum_probs=323.1
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.+++++..+||+++|++++|++||+++||||||+++|+++||+++.++++ |+||+.|++||+.|.+.++++|+++++|
T Consensus 51 ~tIlk~i~~~hp~a~ll~~~~~~~~~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~ 130 (464)
T cd00309 51 ATILKEIEVEHPAAKLLVEVAKSQDDEVGDGTTTVVVLAGELLKEAEKLLAAGIHPTEIIRGYEKAVEKALEILKEIAVP 130 (464)
T ss_pred HHHHHhccCcCHHHHHHHHHHHHHHhHhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 456788888999999999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred --CCCHHHHHHHHhhccC------CchhHHHHHHHHHHhhcc------CCceeE------------------E-------
Q 014070 91 --ITTFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWE------NDLITI------------------F------- 131 (431)
Q Consensus 91 --v~~~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~------~~~i~i------------------f------- 131 (431)
..+.+++.++|+++.+ +++.+++++++|+.++++ .+.|+| |
T Consensus 131 ~~~~~~~~l~~ia~tsl~sK~~~~~~~~l~~l~~~Ai~~v~~~~~~~~~~~I~i~k~~gg~~~ds~li~Gi~~~~~~~~~ 210 (464)
T cd00309 131 IDVEDREELLKVATTSLNSKLVSGGDDFLGELVVDAVLKVGKENGDVDLGVIRVEKKKGGSLEDSELVVGMVFDKGYLSP 210 (464)
T ss_pred cCCCCHHHHHHHhHhcccccccccchHHHHHHHHHHHHHhccccCccccceEEEEecCCCCcccceeeeeEEEecCCCCC
Confidence 5578899999999887 588999999999999987 455555 1
Q ss_pred ----EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhH
Q 014070 132 ----VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIM 207 (431)
Q Consensus 132 ----~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~l 207 (431)
+++||+|+++|++++. ++++.++|++.++++|.. .+|++|+. .++++|
T Consensus 211 ~m~~~~~n~~Ili~~~~Le~-----------------lIi~~~~I~~~al~~L~~------~~I~~v~~-----~~~~~L 262 (464)
T cd00309 211 YMPKRLENAKILLLDCKLEY-----------------VVIAEKGIDDEALHYLAK------LGIMAVRR-----VRKEDL 262 (464)
T ss_pred CCceeecCceEEEEecCcce-----------------EEecCCCcCHHHHHHHHH------CCeEEEEe-----CCHHHH
Confidence 7799999999998887 555566799999998875 46789985 567889
Q ss_pred HHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhccchHHHHHHh
Q 014070 208 EDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLA 284 (431)
Q Consensus 208 e~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~---~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~ 284 (431)
+|||++|||+++++ ++++++++||+|+.|++. +++++++.++..
T Consensus 263 ~~Ia~~tGa~ii~~-----~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~---------------------------- 309 (464)
T cd00309 263 ERIAKATGATIVSR-----LEDLTPEDLGTAGLVEETKIGDEKYTFIEGCKG---------------------------- 309 (464)
T ss_pred HHHHHHhCCEEecc-----cccCCcccCccccEEEEEEEcCeeEEEEEecCC----------------------------
Confidence 99999999999987 788999999999999864 456788887655
Q ss_pred hhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHc-CCCCCccHHHHHHHHHHHhhccC-CchHHHHHHHHHHHHH
Q 014070 285 KLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALK 362 (431)
Q Consensus 285 ~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~ 362 (431)
++.|||++||+|+.+++|+||+++||++++++++++ ++|||||++||+++.+|++++.. ++++|+++++|++||+
T Consensus 310 ---~~~~TIllrG~t~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~aL~ 386 (464)
T cd00309 310 ---GKVATILLRGATEVELDEAERSLHDALCAVRAAVEDGGIVPGGGAAEIELSKALEELAKTLPGKEQLGIEAFADALE 386 (464)
T ss_pred ---CCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999998 59999999999999999999876 8999999999999999
Q ss_pred HHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 363 MAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 363 ~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
.||++|++|||+|+.++ .+|++. +..++|+|..+|++.||++.|||||+.||+++++.|+|+|++||+|
T Consensus 387 ~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~g~d~~~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~i 459 (464)
T cd00309 387 VIPRTLAENAGLDPIEVVTKLRAKHAEGGGNAGGDVETGEIVDMKEAGIIDPLKVKRQALKSATEAASLILTI 459 (464)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhhccCCCeeEECCCCcEeehhhccCeecHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999 999764 3457899999999999999999999999999999999999999986
No 35
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=1.4e-63 Score=523.56 Aligned_cols=373 Identities=21% Similarity=0.305 Sum_probs=335.9
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
..++..+..+||+++++++.+.+||+++||||||+++|+++||+++.++++ |+||+.|++||+.|.+.+++.|++++++
T Consensus 32 ~tIl~~l~~~~P~~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~~~~li~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~ 111 (485)
T PF00118_consen 32 ATILKSLKINHPIAKLLVEASKSQDEEVGDGTTSVVLLACELLRNALKLIKKGIHPQEIIRGLQEALKIILEYLEKISIP 111 (485)
T ss_dssp HHHHHHSTBSSHHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHSEE
T ss_pred hHHHHHhhhccchhhhHHHhHHHHHhhhccccceeeecccchhhhhhhhhhccccccchhhhhhhhhhhhhhhhhhhhcc
Confidence 457788899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCCH-HHHHHHHhhccCCc------hhHHHHHHHHHHhhc------cCCceeE---------------E-----------
Q 014070 91 ITTF-EEIAQVGTTAANGD------GEIGELIAKVFEKGW------ENDLITI---------------F----------- 131 (431)
Q Consensus 91 v~~~-~~l~~vA~~s~~~~------~~la~li~~A~~~vg------~~~~i~i---------------f----------- 131 (431)
+++. +.+.++|.++.+++ +.+++++++|+..+. ..+.+.+ |
T Consensus 112 ~~~~~~~l~~i~~t~l~~k~~~~~~~~l~~li~~a~~~~~~~~~~~~i~i~~i~g~~~~dS~li~Giv~~~~~~~~~~~~ 191 (485)
T PF00118_consen 112 INNDDESLLNIAKTSLNSKISSSWSDHLSKLIVDAIKSIKSNFDLDNIKIIKIPGGSISDSELINGIVLDKGFSSPNMPK 191 (485)
T ss_dssp STSTSHHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHHHTTTHHGGGEEEEEEESSSSGGEEEESEEEESSSBSSTTSBS
T ss_pred ccccchhhhhhhcccccccccccchhhhhhhHHHHHHhhcccccccchhhhhhccccccccccccceeeecccccccccc
Confidence 9876 89999999999876 799999999994332 2222222 1
Q ss_pred EEeCcEEEEeccccCCHHH-----------------------HHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCC
Q 014070 132 VLDGALVLIYDTKISNSNV-----------------------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTT 188 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~-----------------------~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~ 188 (431)
+++||+|++++++++.... +.++++.+.+.|.++++++++|++.++++|..|+
T Consensus 192 ~~~~~~Ill~~~~L~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~---- 267 (485)
T PF00118_consen 192 KIENPKILLLNCPLEYSKSFKSEIRITSPEQLDELSKQEKKYLKKILEKIINLGVNLIISQKSIDDEALQYLNKNG---- 267 (485)
T ss_dssp EEESEEEEEESSEBSSCCHSTEEEEESSTHHHHHHHHHHHHHHHHHHHHHHTTTSSEEEESSEBTHHHHHHHHHCT----
T ss_pred ccccceEEeeecccccccccccccchhhHHHHHHHHhhhhhhhccccceEeeeccceeeeecccccccchhhhhhh----
Confidence 6899999999998877766 8889999999999999999999999999998765
Q ss_pred CcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEE---EEecceEEEEc--CCCChhhHHHH
Q 014070 189 EKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV---IATMDNVVIIG--GSGELVDIQER 263 (431)
Q Consensus 189 ~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v---~v~~~~~~~i~--~~~~~~~i~~r 263 (431)
+.+++ +.++++|++|+++|||+++++ +++++++++|+|+.+ +++++++++++ ++.
T Consensus 268 --I~~i~-----~v~~~~l~~i~~~tg~~ii~~-----~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-------- 327 (485)
T PF00118_consen 268 --ILVIR-----RVSKEDLERIARATGASIISS-----LDDLSDEDLGFCKSVEEREIGNKKYIFIEGIGCL-------- 327 (485)
T ss_dssp --HEEES-----SEHHHHHHHHHHHHTSBEBSS-----CGGSTGGGSEEEEEEEEEEETSSEEEEEEEHSES--------
T ss_pred --hhccc-----cchHHHHHhhhcccCCcEecc-----cccccchhhhhhhhhhhccccccccccccccccc--------
Confidence 34554 457889999999999999987 688888889999999 67889999998 332
Q ss_pred HHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHHHHh
Q 014070 264 CEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDK 342 (431)
Q Consensus 264 ~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~L~~ 342 (431)
+++.+||+|||+|+.+++|+||+++||+++++++++++ +|||||++|++++.+|++
T Consensus 328 -----------------------~~~~~Till~g~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~ 384 (485)
T PF00118_consen 328 -----------------------SSKICTILLRGPTEFELEERERSIHDALKVLRSALKDGGVVPGGGATELHLSKALRK 384 (485)
T ss_dssp -----------------------SSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSSEEEETTTHHHHHHHHHHHH
T ss_pred -----------------------ccCceEEEeccccchhHHHHHHHHHHHHHHHHHhccCCceeecCcchhhhhhhhHHH
Confidence 35789999999999999999999999999999999965 999999999999999998
Q ss_pred hccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHh--cCCCCeeEeCCCCccccccccCcccccccHHHHH
Q 014070 343 LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLE--QDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEF 418 (431)
Q Consensus 343 ~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~--~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai 418 (431)
++.. ++++++++++|++||+.||++|++|||+|+.++ .+|+. ..+.++|||..+|++.||++.|||||+.+|++++
T Consensus 385 ~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~h~~~~~~g~d~~~~~i~~~~~~gi~dp~~~k~~~l 464 (485)
T PF00118_consen 385 YAKSLSGKEQLAIEAFADALESIPKTLAQNAGLDSSEVISKLKSFHNNGNNYGIDLDTGEIVDMKEAGILDPLLVKISAL 464 (485)
T ss_dssp HHHCSSSHHHHHHHHHHHHTTHHHHHHHHHTTSTHHHHHHHHHHHHHSTTTEEEETTTTEEEETTTTTCEEEHHHHHHHH
T ss_pred hhhcccCchhhhHHHHHHHHHHhhhhhhhccCCCceeeehhhHhhhccccccCcCccCCceeccccccchhhHHHHHHHH
Confidence 8877 899999999999999999999999999999999 99987 3556899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC
Q 014070 419 AKATSMISLKNAI 431 (431)
Q Consensus 419 ~~A~~~a~~iL~i 431 (431)
+.|+++|++||+|
T Consensus 465 ~~A~~~a~~iL~i 477 (485)
T PF00118_consen 465 KSAVEIASLILRI 477 (485)
T ss_dssp HHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999986
No 36
>KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.8e-64 Score=484.82 Aligned_cols=372 Identities=19% Similarity=0.276 Sum_probs=328.3
Q ss_pred HHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhcccC
Q 014070 13 RLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKI 91 (431)
Q Consensus 13 ~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~v 91 (431)
-.+|..|.-+|+|++++++|+.||+|+|||||||+|||++||+||++++. .+||+.|+.||++|...+++.|.+.++..
T Consensus 64 tILksi~vDnpaAkvLv~~S~vQD~EvGDGTTSV~vlaaeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dn 143 (527)
T KOG0363|consen 64 TILKSIGVDNPAAKVLVDISKVQDDEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDN 143 (527)
T ss_pred HHHHhcCCCCchhhheeccccccccccCCCceehHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 46788999999999999999999999999999999999999999999999 99999999999999999999999988765
Q ss_pred C-C----HHHHHHHHhhccC------CchhHHHHHHHHHHhhccCCc---eeE----------------E----------
Q 014070 92 T-T----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWENDL---ITI----------------F---------- 131 (431)
Q Consensus 92 ~-~----~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~~~~---i~i----------------f---------- 131 (431)
+ + +++|.++|+|... ..++|+++.++|+.++...+. |.| |
T Consensus 144 s~~~~kfr~DLl~iarTTL~SKiLsq~kehFaelavdAV~rLkGs~nL~~IqIIK~~Gg~l~dSfLDeGFlL~K~igv~q 223 (527)
T KOG0363|consen 144 SSDKEKFREDLLKIARTTLSSKILSQDKEHFAELAVDAVLRLKGSTNLEAIQIIKKLGGKLEDSFLDEGFLLDKKIGVNQ 223 (527)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCCccceeeehhcCCccccccccccceeccccCCCC
Confidence 4 2 4789999976542 467999999999999865432 333 2
Q ss_pred --EEeCcEEEEeccc--------------cCCH-----------HHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhc
Q 014070 132 --VLDGALVLIYDTK--------------ISNS-----------NVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDF 184 (431)
Q Consensus 132 --~l~np~Ill~d~~--------------i~~~-----------~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~ 184 (431)
+++||+||+-|.. +++. +.+...+++|.++|.|++|-.+-|.+-..+.|..
T Consensus 224 pkriena~iLIANT~mDtDKvKvfGarvrVds~~klaelE~AEkeKmK~KV~kI~~hgiN~FiNRQLiYnyPeqLf~d-- 301 (527)
T KOG0363|consen 224 PKRIENAKILIANTPMDTDKVKVFGARVRVDSTAKLAELEKAEKEKMKEKVEKILKHGINVFINRQLIYNYPEQLFAD-- 301 (527)
T ss_pred cccccccceEEecCCCcccceeeecceEeecchhHHHHHHHHHHHHHHHHHHHHHhcCCcEEeehhHhhcCHHHHHhh--
Confidence 7999999998642 2332 2355668899999999887766776666665542
Q ss_pred cCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEE---EecceEEEEcCCCChhhHH
Q 014070 185 TCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQ 261 (431)
Q Consensus 185 ~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~---v~~~~~~~i~~~~~~~~i~ 261 (431)
.+|+++.+.+|.. +|||+..|||.++|. |++++...||+|+.++ +++++++-|.||.-
T Consensus 302 ----agi~aIEHADFdG-----iERLalvtGGeI~ST-----Fd~p~~~klG~C~~IeeimiGed~li~FSGv~~----- 362 (527)
T KOG0363|consen 302 ----AGIMAIEHADFDG-----IERLALVTGGEIVST-----FDNPELVKLGECDLIEEIMIGEDKLIKFSGVKL----- 362 (527)
T ss_pred ----cCcceeecccchh-----HHHHhhcccceeeec-----cCCcchhccccchhhHHHhcCccceeeeccccc-----
Confidence 3678999887764 799999999999997 9999999999999876 69999999999854
Q ss_pred HHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHHH
Q 014070 262 ERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKEL 340 (431)
Q Consensus 262 ~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~L 340 (431)
|..|||++||+|++.+||.||++|||||+....+++. +|.||||+||.+++.+
T Consensus 363 --------------------------GeActIVlrGat~q~LDEaeRslHDALcVLaqtv~esrvv~GgG~sEm~Ma~av 416 (527)
T KOG0363|consen 363 --------------------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKESRVVLGGGCSEMLMAKAV 416 (527)
T ss_pred --------------------------ccceEEEEecccHHHHHHHHHHHHHHHHHHHHHhccceeeecCCcHHHHHHHHH
Confidence 5689999999999999999999999999999999886 9999999999999999
Q ss_pred HhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccHH
Q 014070 341 DKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVP 415 (431)
Q Consensus 341 ~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~ 415 (431)
.+++.+ +|++..++++|++||..+|.+||.|+|||+.++ .+||+. +...+|+|+++|++.||.+.||+|+++||+
T Consensus 417 ~~~A~~~pGkea~AieAfarAL~qlPtiiaDNaG~dsaelva~Lra~h~~g~~t~Gld~~~G~i~dm~~~Gi~es~~vK~ 496 (527)
T KOG0363|consen 417 DKEAQETPGKEALAIEAFARALRQLPTIIADNAGYDSAELVAQLRAEHYNGRTTMGLDVRNGEIGDMRELGIVESLKVKQ 496 (527)
T ss_pred HHHHhhCCchhhHHHHHHHHHHHhcchhhhccCCCCHHHHHHHHHHHhhcCCcccccccccCchhhHHHhhhHHHHHHHH
Confidence 999988 999999999999999999999999999999999 999974 567899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC
Q 014070 416 SEFAKATSMISLKNAI 431 (431)
Q Consensus 416 ~ai~~A~~~a~~iL~i 431 (431)
..+.+|.|+|.+|||.
T Consensus 497 ~vv~sasEaae~ilrv 512 (527)
T KOG0363|consen 497 AVVSSASEAAEMILRV 512 (527)
T ss_pred HHHhhhHHHHHHHHhh
Confidence 9999999999999974
No 37
>KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-62 Score=476.73 Aligned_cols=378 Identities=19% Similarity=0.223 Sum_probs=334.0
Q ss_pred HHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhcccC
Q 014070 13 RLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKI 91 (431)
Q Consensus 13 ~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~v 91 (431)
-.+|.|..-||+++|++++|++||.|+||||||||+|||+||..+.+|++ |+||+.|...|+.|.+.++++|.+++.|+
T Consensus 70 TILk~m~vlhP~akmLvelS~aQD~eaGDGTTsVVilaGaLL~~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~v 149 (534)
T KOG0358|consen 70 TILKQMNVLHPAAKMLVELSAAQDSEAGDGTTSVVILAGALLEAAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPV 149 (534)
T ss_pred HHHHHHhhhChHHHHHHHhhhhccccccCCceEEEEehhhHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCc
Confidence 46888999999999999999999999999999999999999999999999 99999999999999999999999999998
Q ss_pred C--CHHHHHHHHhhccC------CchhHHHHHHHHHHhhccCC--------ceeE------------------E------
Q 014070 92 T--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEND--------LITI------------------F------ 131 (431)
Q Consensus 92 ~--~~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~~~--------~i~i------------------f------ 131 (431)
+ +++.|.+-|+||.| +...++.+.++|+.++-... .|.| |
T Consensus 150 elsdre~Li~~atTsLnSKvvSq~s~llapmAVdAV~kv~dp~~~~nvdlkdIkivkklGgtvdDte~i~glvl~~~~~~ 229 (534)
T KOG0358|consen 150 ELSDRESLIKSATTSLNSKVVSQYSSLLAPMAVDAVLKVIDPENATNVDLKDIKIVKKLGGTVDDTELIKGLVLTQKASK 229 (534)
T ss_pred ccCcHHHHHHHHHhHhhHHHHHhhccccchHHHHHHHhccCcccccccchhhhhhHHhhCCccchhhhhcceEEeeeccc
Confidence 6 67778888988876 35578899999999875311 1222 1
Q ss_pred -----EEeCcEEEEeccc-------------cCCHHH-----------HHHHHHHHHhcCCcEEEEecCcchhHHHHHHH
Q 014070 132 -----VLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDIAT 182 (431)
Q Consensus 132 -----~l~np~Ill~d~~-------------i~~~~~-----------~~~~le~i~~~~~~lvii~~~i~~~al~~l~~ 182 (431)
++++++|-++... ++++.+ +++++.+++++|+++++++++|=.++++.|+.
T Consensus 230 ~~gptriekAkIglIQF~iS~PKtdmen~iiv~DyaqMdrilkeER~YiL~mcKkIKk~gcnvLliQKSILRdavsDLAl 309 (534)
T KOG0358|consen 230 SAGPTRIEKAKIGLIQFQISPPKTDMENQIIVNDYAQMDRILKEERQYILNMCKKIKKAGCNVLLIQKSILRDAVSDLAL 309 (534)
T ss_pred CCCcchhhhceeeEEEEEecCCCCCcccceEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEeHHHHHHHHHHHHH
Confidence 6677788776532 333333 45566789999999999999999999999888
Q ss_pred hccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE----ecceEEEEcCCCChh
Q 014070 183 DFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA----TMDNVVIIGGSGELV 258 (431)
Q Consensus 183 n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v----~~~~~~~i~~~~~~~ 258 (431)
+.+. .++|++|| |..++++|++|+.+|++++++ ++.++++.||+++.++. ++.+.+-+.|+.++
T Consensus 310 HfL~-klkimvik-----dieRediefick~l~c~Pia~-----id~f~~d~Lg~adlveE~~~~G~gkivk~tg~~n~- 377 (534)
T KOG0358|consen 310 HFLA-KLKIMVIK-----DIEREDIEFICKTLGCKPIAD-----IDHFTADKLGSADLVEETDSSGEGKIVKITGIQNA- 377 (534)
T ss_pred HHHH-hCcEEEEc-----cccHhhHHHHHhhcCCeecch-----hhhcChhhcCcchhhhhcccCCCccEEEEEEeecC-
Confidence 7664 47899998 456778999999999999987 89999999999999875 35577888887663
Q ss_pred hHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHH
Q 014070 259 DIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYAS 337 (431)
Q Consensus 259 ~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s 337 (431)
|.+++|++||+++..++|.||++|||||++|..++.. .+||||+.|++++
T Consensus 378 -----------------------------g~tvsil~RGsn~lvleEaeRSlhDALCVirCLvk~r~li~GGGapEieia 428 (534)
T KOG0358|consen 378 -----------------------------GRTVSILLRGSNKLVLEEAERSLHDALCVIRCLVKKRALIAGGGAPEIEIA 428 (534)
T ss_pred -----------------------------CCceEEEEecCchhhhHHHhhhhhhhhHHHHhhhhccceecCCCCcchHHH
Confidence 6789999999999999999999999999999999875 8999999999999
Q ss_pred HHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccc
Q 014070 338 KELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLK 412 (431)
Q Consensus 338 ~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~ 412 (431)
..|.+++.. .|.+.|++++|++|||.||.+||+|||++|..+ .+||+. +...+|++++.|.+.||++..|+.|+.
T Consensus 429 ~~L~~~a~t~eG~~~yc~rafA~AlEvIP~tLAeNAGLnpI~~VtELRn~haqge~~aGInVRkg~~tni~ee~VvQPll 508 (534)
T KOG0358|consen 429 LRLSALARTLEGVEAYCWRAFADALEVIPYTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGGITNILEENVVQPLL 508 (534)
T ss_pred HHHHHHHhhhccchhHHHHHHHHHHhcccHhHHhhCCCChhhHHHHHHHHHhcCCcccceeeecccchhhHHHhccccee
Confidence 999999988 899999999999999999999999999999999 999974 667899999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcC
Q 014070 413 HVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 413 vk~~ai~~A~~~a~~iL~i 431 (431)
|-.++++.|+|.+.+||+|
T Consensus 509 Vs~SaitlA~Etvr~ILKI 527 (534)
T KOG0358|consen 509 VSISAITLATETVRSILKI 527 (534)
T ss_pred eeHHHHHHHHHHHHHHhhh
Confidence 9999999999999999987
No 38
>KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.7e-56 Score=435.99 Aligned_cols=372 Identities=14% Similarity=0.118 Sum_probs=321.4
Q ss_pred HHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhcccC
Q 014070 13 RLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKI 91 (431)
Q Consensus 13 ~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~v 91 (431)
-.+-+.-.|||+|+-+.++|.+||+|||||||||++|++|+|.++..+++ |+||+.|++.|.+|++.++..++.++.|+
T Consensus 63 ailrei~Vahpaaksmiel~rtqdeevgdgttsvi~lagE~L~~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~ 142 (527)
T KOG0364|consen 63 AILREIDVAHPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLNVAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPV 142 (527)
T ss_pred HHHHHHhhcCcchhhHhhhhhcccccccCCceeeeeehHHHhhhcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 34556778999999999999999999999999999999999999999999 99999999999999999999999988887
Q ss_pred C--CHHHHHHHHhhccC------CchhHHHHHHHHHHhhccC-Cc-eeE------------------------E------
Q 014070 92 T--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN-DL-ITI------------------------F------ 131 (431)
Q Consensus 92 ~--~~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~~-~~-i~i------------------------f------ 131 (431)
+ +...+.++...+.. -++.++++..+|+++|+.+ |. +++ +
T Consensus 143 d~~~~~km~~vi~~~v~tk~~~~~~~~~~~lal~avk~V~~~~g~e~dik~y~kveKvpgg~l~~s~vl~Gv~~nkdv~H 222 (527)
T KOG0364|consen 143 DVKDQAKMLRVINSSVGTKFNSRWSDLICNLALDAVKTVGVENGREIDIKRYAKVEKVPGGLLEDSCVLKGVMINKDVTH 222 (527)
T ss_pred CcccHHHHHhhhhhhhhhhhhhhhcchhhhHHHHHHHHhhhccCceechhhhccccccCcccccccceecceeeccccCc
Confidence 6 55667766554432 2456788899999999864 32 333 1
Q ss_pred -----EEeCcEEEEeccccCC-------------H-----------HHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHH
Q 014070 132 -----VLDGALVLIYDTKISN-------------S-----------NVIRQASLPCMMQGQSLLVVAEDVENEVLGDIAT 182 (431)
Q Consensus 132 -----~l~np~Ill~d~~i~~-------------~-----------~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~ 182 (431)
.++||+|+++|+++.. . +++..+.+.+..-.-.+|+..+++++.+.++|..
T Consensus 223 pkmrr~IenprivLlD~~LeykkGeSqtnve~~~eed~~r~Lqieee~v~~mc~~Ii~v~pDlVitekG~sdla~hyl~k 302 (527)
T KOG0364|consen 223 PKMRRAIENPRIVLLDCPLEYKKGESQTNVEIVKEEDFTRILQIEEEQVQAMCEVIIAVKPDLVITEKGVSDLAQHYLLK 302 (527)
T ss_pred HHHHHHhhcCcEEEecCCccCCCCccccceeeeechhHHHHHHhhHHHHHHHHHHHHeecccEEEeccchhHHHHHHHHh
Confidence 7899999999985421 1 2344455666666655666678999999999987
Q ss_pred hccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCcee-ccEEEE---ecceEEEEcCCCChh
Q 014070 183 DFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA---TMDNVVIIGGSGELV 258 (431)
Q Consensus 183 n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~-~~~v~v---~~~~~~~i~~~~~~~ 258 (431)
++. .++ .+.|+.+..+++++||++++++ ++|+.+.+.|+ |+.+++ +++.|+||..|.+|
T Consensus 303 ~~i------T~~-----rr~rKtDn~ria~acga~iv~r-----pedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck~p- 365 (527)
T KOG0364|consen 303 ANI------TAI-----RRLRKTDNNRIARACGARIVNR-----PEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCKEP- 365 (527)
T ss_pred cCc------hhh-----hhhhccccchhhhhcCceeccC-----hhhCchhccCcccceeeeeccCchhhhhhhhcCCC-
Confidence 653 344 3678899999999999999997 89999999996 788875 67789999999998
Q ss_pred hHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHH
Q 014070 259 DIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYAS 337 (431)
Q Consensus 259 ~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s 337 (431)
+.|||++||+|...++|.+|.+.||..+.|+.+-++ +|||||++||.+|
T Consensus 366 ------------------------------kaCtillrg~skdil~e~ernlqda~~varn~ii~PklvPGGGAtEMAvs 415 (527)
T KOG0364|consen 366 ------------------------------KACTILLRGPSKDILNEVERNLQDAMGVARNVIINPKLVPGGGATEMAVS 415 (527)
T ss_pred ------------------------------cceEEEeccCchhHHHHHHHHhhhHHHHHHHhccCCcccCCccHHHHHHH
Confidence 469999999999999999999999999999999987 9999999999999
Q ss_pred HHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccc
Q 014070 338 KELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLK 412 (431)
Q Consensus 338 ~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~ 412 (431)
..|++.+.. +|-+|+.+.+++.||+.+||+|++|+|.++... ..++.. +...||+|..+|.++||.+.|+|+|..
T Consensus 416 ~~L~qksa~~~GVekwPY~Ava~AlEviPrtliqncGan~Ir~lTalr~kh~~G~~~~gi~g~tg~iVDm~~~~iwep~~ 495 (527)
T KOG0364|consen 416 HELRQKSALMTGVEKWPYGAVAGALEVIPRTLIQNCGANPIRALTALRAKHKEGQRVWGIDGETGVIVDMVELGIWEPEA 495 (527)
T ss_pred HHHHHHHhhccchhccchhhhhcCceeccHHHHhhcCccHHHHHHHHHHHhcCcceeecccCceeeEeeeeeccccchhh
Confidence 999987777 899999999999999999999999999999988 878764 446789999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcC
Q 014070 413 HVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 413 vk~~ai~~A~~~a~~iL~i 431 (431)
||.+.+++|.+.|+++|||
T Consensus 496 vK~Q~~ktavesa~~LLRI 514 (527)
T KOG0364|consen 496 VKLQTGKTAVESACLLLRI 514 (527)
T ss_pred hhhhhhhHHHHHHHHHHhh
Confidence 9999999999999999997
No 39
>KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-55 Score=436.29 Aligned_cols=375 Identities=16% Similarity=0.206 Sum_probs=323.8
Q ss_pred HhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh-hcccC
Q 014070 14 LINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC-QARKI 91 (431)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~-~s~~v 91 (431)
++--+-.+||++|+++++++.||+|+|||||++++++++|++++.+|+. ++||+.|+.||+.|+..+++++.+ .+.|+
T Consensus 64 iL~~l~V~HPa~KiLvelaq~qd~evgDgttsvviia~eLl~~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~v 143 (545)
T KOG0360|consen 64 ILSLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPV 143 (545)
T ss_pred HHHhhhhcchHHHHHHHHHHhccccccCCceEEEEEEHHhhhhHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeeh
Confidence 3444567899999999999999999999999999999999999999999 999999999999999999999986 66777
Q ss_pred C--CHHHHHHHHhhccC------CchhHHHHHHHHHHhhc---cCCc-------eeE-----------------------
Q 014070 92 T--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGW---ENDL-------ITI----------------------- 130 (431)
Q Consensus 92 ~--~~~~l~~vA~~s~~------~~~~la~li~~A~~~vg---~~~~-------i~i----------------------- 130 (431)
+ ..+-|.++|.++.. ..++|++++++|+..+. .+|. ++|
T Consensus 144 d~lg~~~Lin~~ktsmsSK~i~~ds~~f~~~Vvda~l~v~~~~~~ge~~ypi~~vnILkahG~s~~eS~l~~GyaLnc~~ 223 (545)
T KOG0360|consen 144 DSLGTQILINLAKTSMSSKIIGMDSDFFTEMVVDALLAVKILDINGEPHYPINSVNILKAHGKSQIESMLLPGYALNCSV 223 (545)
T ss_pred hhcchHHHHHHHHhhhcceecccchHHHHHHHHHHHHHHhhcccCCceeccccceeEEecCCccchhheeecceeeeccH
Confidence 6 35789999987764 36799999999998753 1232 233
Q ss_pred ---E---EEeCcEEEEeccc-------------cCCHHHHH-----------HHHHHHHhcCCcEEEEecCcchhHHHHH
Q 014070 131 ---F---VLDGALVLIYDTK-------------ISNSNVIR-----------QASLPCMMQGQSLLVVAEDVENEVLGDI 180 (431)
Q Consensus 131 ---f---~l~np~Ill~d~~-------------i~~~~~~~-----------~~le~i~~~~~~lvii~~~i~~~al~~l 180 (431)
+ .+.|++|+++|.. |.+++++. ..++++...|+++++++++|||.++.+|
T Consensus 224 asq~m~~~i~~~Kiacld~~Lqk~km~lGv~vvv~dp~kle~ir~~e~~itkeRi~kIl~~ganvVLtt~gIddmc~K~~ 303 (545)
T KOG0360|consen 224 ASQMMPLRIKNAKIACLDFTLQKTKMKLGVQVVVDDPEKLEQIRQREQDITKERIKKILATGANVVLTTGGIDDMCLKYF 303 (545)
T ss_pred hhhccccccccceeeeEecccccccccccceEEEcChHHHHHHHHHHhHhHHHHHHHHHhcCCcEEEEcCCccHHHHHHH
Confidence 1 7889999999863 45554432 2356888999999999999999999999
Q ss_pred HHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCc-cCCCCCCceeccEEE---EecceEEEEcCCCC
Q 014070 181 ATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFVPLKLGSCKRVI---ATMDNVVIIGGSGE 256 (431)
Q Consensus 181 ~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l-~~~~~~~LG~~~~v~---v~~~~~~~i~~~~~ 256 (431)
+.. +++||+ +.++++|++||++||++++++-..++= +.+.+..+|+|++|. +++|+++.+.|.+.
T Consensus 304 vea------gamAVr-----R~~k~dlk~iakatGat~~sSla~l~geetf~~~~lG~a~evvqeri~dde~ilikg~ka 372 (545)
T KOG0360|consen 304 VEA------GAMAVR-----RCKKEDLKRIAKATGATLLSSLANLEGEETFEPASLGSADEVVQERIGDDELILIKGTKA 372 (545)
T ss_pred HHc------chhhhH-----HHHHHHHHHHHHhhCCeeeehhhccccccccChhhccchhHHHHHhcccceeEEeccCcc
Confidence 864 346765 567899999999999999998433221 346788999999885 57889999987433
Q ss_pred hhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHH
Q 014070 257 LVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLY 335 (431)
Q Consensus 257 ~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~ 335 (431)
..|.|++||++++.+||++|++|||||++|..++++ +|||||++|.+
T Consensus 373 --------------------------------~~aSiILrgaNd~~~DEmers~hdaL~VlkrtLes~~vvpGGG~vE~a 420 (545)
T KOG0360|consen 373 --------------------------------TSASIILRGANDFMLDEMERSLHDALCVLKRTLESKSVVPGGGAVETA 420 (545)
T ss_pred --------------------------------ceeeEEEecCCcccHhhhccchhhHHHHHHHHhccCccccCccHHHHH
Confidence 258999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-----------CCCCeeEeCCCCccccc
Q 014070 336 ASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ-----------DSSDLGYNPARGNYVDM 402 (431)
Q Consensus 336 ~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~-----------~~~~~G~d~~~g~~~d~ 402 (431)
++.+|+.|+.+ ..++|+.+..|++||..||++|+-|++.|+.++ .++|.. ...++|+|..+|+++|.
T Consensus 421 Ls~yle~~a~s~~srE~laiaefa~all~ipktla~naa~Dstelvt~lra~Hs~~q~~p~~~~~k~~GldL~ng~~~dn 500 (545)
T KOG0360|consen 421 LSIYLENFATSVGSREQLAIAEFAAALLSIPKTLAVNAAKDSTELVTKLRAYHSVSQDNPWRLLLKQYGLDLINGKIRDN 500 (545)
T ss_pred HHHHHHhhcccCccHHHHHHHHHHHHHhcchHHHhhhhccccccccccccCCchhhccCCccccchhhCccccccEeecc
Confidence 99999999988 899999999999999999999999999999999 999852 13478999999999999
Q ss_pred cccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 403 FKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 403 ~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
++.|+++|..+|...++.|+++|..+|||
T Consensus 501 ~~~g~~ep~~~kvksLk~ateaaitiLri 529 (545)
T KOG0360|consen 501 KSAGSFEPPIVKVKSLKFATEAAITILRI 529 (545)
T ss_pred eeeeeeccceeehhhhHHHHHhhhhhcch
Confidence 99999999999999999999999999997
No 40
>KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-54 Score=414.28 Aligned_cols=306 Identities=18% Similarity=0.174 Sum_probs=281.0
Q ss_pred cchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhcccCCCHHHHHH
Q 014070 21 QPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQ 99 (431)
Q Consensus 21 ~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~v~~~~~l~~ 99 (431)
.|+.++++..+|..||.++|||||.+++|++.+++++.+++. |+||..|..||+.+...+++.|.+++.+++
T Consensus 71 d~~IakLmv~LS~sqd~eIgdGtTgVvvLa~alleqa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~e------- 143 (400)
T KOG0357|consen 71 VHQIAKLIVILSKSQDDEIGDGTTGVVVLAGALLEQAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPFE------- 143 (400)
T ss_pred chHHHHHHHHhcccchhhhccCCcccEEecccchHhHHhhcccccchhHHHHhhhhHHHhhhhhhhhhccccc-------
Confidence 668999999999999999999999999999999999999999 999999999999999999999999887765
Q ss_pred HHhhccCCchhHHHHHHHHHHhhccCCceeEEEEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHH
Q 014070 100 VGTTAANGDGEIGELIAKVFEKGWENDLITIFVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGD 179 (431)
Q Consensus 100 vA~~s~~~~~~la~li~~A~~~vg~~~~i~if~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~ 179 (431)
+ ..+++.++++|.+++||+|+|||++.+.
T Consensus 144 -------------------f--------------------------------~emi~~vK~~ga~l~icqwgfddeanhl 172 (400)
T KOG0357|consen 144 -------------------F--------------------------------EEMIQQIKETGANLAICQWGFDDEANHL 172 (400)
T ss_pred -------------------H--------------------------------HHHHHHHHhhCCcEEEEecccCchhhhH
Confidence 1 2356678889999999999999999999
Q ss_pred HHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE-----ecceEEEEcCC
Q 014070 180 IATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDNVVIIGGS 254 (431)
Q Consensus 180 l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v-----~~~~~~~i~~~ 254 (431)
|..|++. ||| |+.-..+|-||++|||+|+.+ |+++++++||+|+.|.. ++|++.+++.|
T Consensus 173 l~~n~lp------avr-----wVGGpEiEliAiaT~grIVpr-----F~eL~~~kLG~aglVrE~sfgttkdkmlviEqc 236 (400)
T KOG0357|consen 173 LLQNNLP------AVR-----WVGGPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVREISFGTTKDKMLVIEQC 236 (400)
T ss_pred HhhcCCC------cee-----ecCCcceEEEEeecCCeeecc-----HhhhCHhhccccceEEEEecccccceEEEEEec
Confidence 9988753 454 344456899999999999987 99999999999999864 58999999999
Q ss_pred CChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHH
Q 014070 255 GELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVAL 333 (431)
Q Consensus 255 ~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~e 333 (431)
++. +..||.|||++...++|.+|++|||||++||.+++. +|.|||++|
T Consensus 237 ~ns-------------------------------kaVTifvRg~Nkmii~EakrslhdalCvirnlird~rivYgGGaaE 285 (400)
T KOG0357|consen 237 KNS-------------------------------KAVTIFVRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAE 285 (400)
T ss_pred CCC-------------------------------ceEEEEEecCcceeHHHHHHHhhhhHHHHHHHhhcCeeEecCchHH
Confidence 996 456999999999999999999999999999999986 999999999
Q ss_pred HHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccccccccCc
Q 014070 334 LYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYVDMFKCGD 407 (431)
Q Consensus 334 l~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~----~~~~~G~d~~~g~~~d~~~~gI 407 (431)
+.||.++.+-+.. +|.+||++++|++||++||..||+|+|++|++. +.+++. .++.+|+|+....--||.+.++
T Consensus 286 iscslav~~ead~~~g~eqya~rafa~ale~ipmalaensgl~pi~~ls~~ka~q~~~~~~~lGidcl~~G~nDMk~~~v 365 (400)
T KOG0357|consen 286 ISCALAVSQEADKIPGIEQYAFRAFADALESIPMALAENSGLDPIETLSDVKARQVKEMNPALGIDCLHKGTNDMKEQHV 365 (400)
T ss_pred hhhhhHhhHhhccCCcHHHHHHHHHHHHHhhcchhhhhccCCCchhhhhHhHHHHHHhcCcccCcchhccCchhhhhhcc
Confidence 9999999988877 999999999999999999999999999999999 888763 5788999998888899999999
Q ss_pred ccccccHHHHHHHHHHHHHHHhcC
Q 014070 408 VDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 408 ~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
+||+.-|++.+..|+.++.|||+|
T Consensus 366 ie~l~~KkqQi~laTQ~vrMiLKi 389 (400)
T KOG0357|consen 366 IETLIGKKQQISLATQMVRMILKI 389 (400)
T ss_pred HHHhhhhHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999987
No 41
>KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-51 Score=411.18 Aligned_cols=373 Identities=15% Similarity=0.175 Sum_probs=315.1
Q ss_pred HHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc-
Q 014070 13 RLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK- 90 (431)
Q Consensus 13 ~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~- 90 (431)
-.+++.-.|||+++|+++.+++|+++.||||+.+++|+++||++|+++|. |++|.+|++||+.|.+.+++.|+++...
T Consensus 70 tIlrelev~HPaakllv~a~~~q~~~iGDgtnfvvvla~~LLe~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~ 149 (537)
T KOG0362|consen 70 TILRELEVEHPAAKLLVEATQMQEEEIGDGTNFVVVLAGALLEQAEELIRMGLTPAEISEGYETATKEALEILPELVVQS 149 (537)
T ss_pred HHHHHhhccCcHHHHHHHHHHHHHHhhCCCceEeehhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHh
Confidence 35788999999999999999999999999999999999999999999999 9999999999999999999999987632
Q ss_pred CCCHHHHHHHHhhccC-----CchhHHHHHHHHHHhhccCCceeE-----------------------E---------EE
Q 014070 91 ITTFEEIAQVGTTAAN-----GDGEIGELIAKVFEKGWENDLITI-----------------------F---------VL 133 (431)
Q Consensus 91 v~~~~~l~~vA~~s~~-----~~~~la~li~~A~~~vg~~~~i~i-----------------------f---------~l 133 (431)
+.+.++...++.++.+ +++++.+++++|+.++.+.+.+++ | .-
T Consensus 150 ~~d~~d~~~~~rs~i~skq~~~ed~l~~lVa~ac~si~p~~~FnvdnIrVcKi~Gg~l~~S~Vv~GmVfkr~~eG~v~~a 229 (537)
T KOG0362|consen 150 IGDLEDKEWALRSVIMSKQYGNEDFLTKLVAKACVSILPLMSFNVDNIRVCKILGGGLEDSCVVCGMVFKRDPEGEVKSA 229 (537)
T ss_pred cccccChHHHHHHHHHHhhcchHHHHHHHHHHHHHhhcccccccccceEEEEEecCCcccceeeEEEEeccccCCccccc
Confidence 3232222233333221 477999999999999877643322 3 34
Q ss_pred eCcEEEEeccc-------------cCCHHHHHHH-----------HHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCC
Q 014070 134 DGALVLIYDTK-------------ISNSNVIRQA-----------SLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 189 (431)
Q Consensus 134 ~np~Ill~d~~-------------i~~~~~~~~~-----------le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~ 189 (431)
...+|.++.|+ |++++++.+| +..+..+|.++++..+.+++..|+.+ | .+
T Consensus 230 k~arvAvf~cP~d~~~TEtkgTvLi~~A~el~~FSKgEe~lle~~vk~Ia~~gvkViV~~g~V~em~Lhfl--n----ky 303 (537)
T KOG0362|consen 230 KDARVAVFACPFDIAQTETKGTVLLKNAKELLNFSKGEEALLEEQVKAIADAGVKVIVSGGKVDEMTLHFL--N----KY 303 (537)
T ss_pred ccceeEEEecCCCcccccCcceeeecCcHhhhhhccccHHHHHHHHHHHHhcCCeEEEecCccchhhhhhh--c----cc
Confidence 55789998886 6777776554 45577789999999999999999843 4 37
Q ss_pred cEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEE---EecceEEEEcCCCChhhHHHHHHH
Q 014070 190 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQ 266 (431)
Q Consensus 190 ~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~---v~~~~~~~i~~~~~~~~i~~r~~~ 266 (431)
+|++++.++.. +|.+||+..|+++.++ +..+.++.+|+|++|. ++++.+++|.....
T Consensus 304 ~ImVlqi~Sk~-----eLrrlcrtvGA~~l~r-----l~~P~~~~lG~~d~V~~~EiG~~~v~vF~~e~~---------- 363 (537)
T KOG0362|consen 304 KIMVLQINSKF-----DLRRLCRTVGATALPR-----LFPPAPEELGYCDSVSTQEIGDTLVVVFRWEST---------- 363 (537)
T ss_pred cEEEEEeccHh-----hHHHHHHHcCCccchh-----ccCCCCccccccceeeeeecCCceEEEEeeccC----------
Confidence 89999987644 5789999999999987 7788889999999875 56777666654222
Q ss_pred HHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHHHHhhcc
Q 014070 267 LRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQT 345 (431)
Q Consensus 267 l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~L~~~~~ 345 (431)
.+.++||++||+|+..+|+.||.++|++++.+...+++ ++||+|++|+++++.|.+|..
T Consensus 364 --------------------~~~~~TvVLRgst~s~LDd~ERAVddgV~tyK~l~~d~rLlpGagatEieLak~i~~~g~ 423 (537)
T KOG0362|consen 364 --------------------GTRVATVVLRGATQSILDDAERAVDDGVNTYKALCSDSRLLPGAGATEIELAKQISSRGA 423 (537)
T ss_pred --------------------CCceeEEEEcccchhhHHHHHHHHHHhHHHhhhhccCCccccCCchhHHHHHHHHHHhcc
Confidence 13679999999999999999999999999999999986 999999999999999999998
Q ss_pred C-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc--CCCCeeEeCCCC-ccccccccCcccccccHHHHHHH
Q 014070 346 T-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ--DSSDLGYNPARG-NYVDMFKCGDVDPLKHVPSEFAK 420 (431)
Q Consensus 346 ~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~--~~~~~G~d~~~g-~~~d~~~~gI~DP~~vk~~ai~~ 420 (431)
. +|..|+++..|++||+..|++||+|+|++..++ .+|... ++.+.|+|+... ...|+.++||||-+.+|.++|+.
T Consensus 424 ~~~Gl~q~Aik~fa~Ale~~PktlaEnagl~~~evia~ly~~h~~g~~~g~di~~e~~~~d~~~~~i~D~~~~K~~a~k~ 503 (537)
T KOG0362|consen 424 TLPGLKQLAIKKFAEALEVLPKTLAENAGLAVTEVIAKLYAVHQGGKNLGMDIEAEGGTIDVREEGIWDTLAVKAQAIKL 503 (537)
T ss_pred cCCCcchhHHHHHHHHhccccHhHHHhcCCcHHHHHHHHHHhhcCCCcceeeeeccccccChhhhchHHHHHHHHHHHHH
Confidence 8 999999999999999999999999999999999 888653 345678888766 48899999999999999999999
Q ss_pred HHHHHHHHhcC
Q 014070 421 ATSMISLKNAI 431 (431)
Q Consensus 421 A~~~a~~iL~i 431 (431)
|+++|.++|++
T Consensus 504 at~aa~tvl~v 514 (537)
T KOG0362|consen 504 ATEAALTVLTV 514 (537)
T ss_pred HHhhhheeeeh
Confidence 99999999875
No 42
>KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.6e-52 Score=409.14 Aligned_cols=371 Identities=17% Similarity=0.211 Sum_probs=317.0
Q ss_pred hhHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhcc
Q 014070 11 RVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQAR 89 (431)
Q Consensus 11 ~~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~ 89 (431)
..-|+-+|..|||.+.++...+..||+..||||||+|+|.++||++|..++. |+||..|..||+.|.+.++++|+..+.
T Consensus 59 gnvLl~emQiqhPTa~lIakaatAqdd~tGDGttS~VlligEllkqa~~~i~eGlhprii~~gfe~a~~~~l~~L~k~~~ 138 (520)
T KOG0359|consen 59 GNVLLKEMQIQHPTASLIAKVATAQDDITGDGTTSVVLLIGELLKQADRYISEGLHPRIITEGFEAAKNKALEFLEKVSR 138 (520)
T ss_pred chhhHHHHhhcCchHHHHHHHHHHhhcccCCCcceEEEeeHHHHHHHHHHhhcCCCcchhhhHHHHHHHHHHhhhhcccc
Confidence 4458899999999999999999999999999999999999999999999999 999999999999999999999997777
Q ss_pred cCCCHHHHHHHHhhccCC------chhHHHHHHHHHHhhc-cCCceeE--------------------------------
Q 014070 90 KITTFEEIAQVGTTAANG------DGEIGELIAKVFEKGW-ENDLITI-------------------------------- 130 (431)
Q Consensus 90 ~v~~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg-~~~~i~i-------------------------------- 130 (431)
++ +.+-|..+|.+|.+. -+.+.+++++|+..+. .++.+++
T Consensus 139 ~~-~~~~L~~va~tsl~Tkv~~~la~~lt~~vv~aVl~i~~~~~~idl~mveim~mq~~s~~dT~~v~glvLdhg~rHpd 217 (520)
T KOG0359|consen 139 EV-DRETLKDVARTSLRTKVHAELADVLTPIVVDSVLCIRRQEEPIDLFMVEIMEMQHKSLHDTSLVQGLVLDHGARHPD 217 (520)
T ss_pred ch-hHHHHHHHHHHhhcCcccHHHHhHhHHHHHhhheeeccCCCCcchhHHHhhhhccCchhhhHHhhhhhccCCCCCcc
Confidence 76 467889999888864 2356777888888776 3444444
Q ss_pred E--EEeCcEEEEeccccC-------------CHHH-----------HHHHHHHHHhcC---CcEEEE-ecCcchhHHHHH
Q 014070 131 F--VLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMMQG---QSLLVV-AEDVENEVLGDI 180 (431)
Q Consensus 131 f--~l~np~Ill~d~~i~-------------~~~~-----------~~~~le~i~~~~---~~lvii-~~~i~~~al~~l 180 (431)
+ .++|++||++|.++. +.+| +.+.+.+|.+-+ +.+|+| +++||+..+..|
T Consensus 218 mp~~~e~a~iL~~NvSLEYEK~EinsgffYsta~ere~L~~~eR~Fi~~r~~kiielk~~vc~fvvinqkGidp~sld~~ 297 (520)
T KOG0359|consen 218 MPRRVEDAYILICNVSLEYEKPEINSGFFYSTAEEREVLVLAERKFIDQRVRKIIELKRKVCEFVVINQKGIDPTSLDSL 297 (520)
T ss_pred cccchhceEEEEeeccccccccccccchhccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcceEEEecccCCCCCcchhh
Confidence 1 889999999997432 1221 112233444433 246666 579999999988
Q ss_pred HHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ecceEEEEcCCCCh
Q 014070 181 ATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGEL 257 (431)
Q Consensus 181 ~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~~~~~~i~~~~~~ 257 (431)
+.+ +|+|+++. ++..||||.++|||..+++ ++|++|++||.|+.|.+ ++++|+|+++|.+|
T Consensus 298 a~~------gIlaLRRA-----KRRNmERL~lacGG~a~ns-----vddLtp~~LG~aglVye~tlGEEkfTFIE~~~~p 361 (520)
T KOG0359|consen 298 AKS------GILALRRA-----KRRNMERLVLACGGEAVNS-----VDDLTPDYLGYAGLVYEYTLGEEKFTFIEKCNNP 361 (520)
T ss_pred hhc------chHHHHHH-----hhhhHHHHHHhhccceecc-----cccCChhhccccceeEEeeccceeeEeeecCCCC
Confidence 754 34676643 4457999999999999986 89999999999999964 89999999999998
Q ss_pred hhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHH
Q 014070 258 VDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYA 336 (431)
Q Consensus 258 ~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~ 336 (431)
+.|||+++|++++.+-+.++.++|+|++++++++++ ++||+|+.|.++
T Consensus 362 -------------------------------~S~TiLikgpnkht~tQikdairdglrav~ntl~d~~~i~Gaga~~va~ 410 (520)
T KOG0359|consen 362 -------------------------------SSVTILIKGPNKHTITQIKDAIRDGLRAVKNTLEDKCGIPGAGAFEVAL 410 (520)
T ss_pred -------------------------------cceEEEEeCCccchHHHHHHHHhhHHHHHHHHhhhcccccCchHHHHHH
Confidence 468999999999999999999999999999999998 899999999999
Q ss_pred HHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-CCCCeeEeCCCCccccccccCccccccc
Q 014070 337 SKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ-DSSDLGYNPARGNYVDMFKCGDVDPLKH 413 (431)
Q Consensus 337 s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~-~~~~~G~d~~~g~~~d~~~~gI~DP~~v 413 (431)
+.+|+..... +|+.++|+++|++||..+|++|++|+|+|+.+. .+|... ....+|+|..+|+..+....||||.+.|
T Consensus 411 ~~~lr~~k~~vkgra~~g~~afa~all~ipk~La~nsg~D~qe~l~~l~~e~~~~~~g~dl~~g~~~~~~~~gi~Dny~v 490 (520)
T KOG0359|consen 411 GRHLRESKKSVKGRAYLGVKAFANALLVIPKTLAKNSGLDEQETLVSLKKEHEVTLRGLDLFRGEECDPSRKGIYDNYSV 490 (520)
T ss_pred HHHHHHhhhccCchhhhhHHHHHhhhhhhhHHHHHhcCCchHHHHHHHHHhhhhhhcccccccCCccchhhccccchHHH
Confidence 9999988777 999999999999999999999999999999998 877654 2235699999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 014070 414 VPSEFAKATSMISLKN 429 (431)
Q Consensus 414 k~~ai~~A~~~a~~iL 429 (431)
|++.|.+++-+|+.+|
T Consensus 491 ~~~~l~s~~via~nlL 506 (520)
T KOG0359|consen 491 KKQLLRSEAVIATNLL 506 (520)
T ss_pred HHHHhhhhHHHHHHHH
Confidence 9999999998888776
No 43
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=99.89 E-value=5.7e-22 Score=186.47 Aligned_cols=165 Identities=27% Similarity=0.371 Sum_probs=139.6
Q ss_pred HHHHHHHhhccC-----CchhHHHHHHHHHHhhcc------CCceeE------------------E-----------EEe
Q 014070 95 EEIAQVGTTAAN-----GDGEIGELIAKVFEKGWE------NDLITI------------------F-----------VLD 134 (431)
Q Consensus 95 ~~l~~vA~~s~~-----~~~~la~li~~A~~~vg~------~~~i~i------------------f-----------~l~ 134 (431)
++|.++|++|.+ .++.+++++++|+..+++ .+.|.| | .++
T Consensus 2 ~~l~~ia~ts~~sk~~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds~li~Gv~~~~~~~~~~m~~~~~ 81 (209)
T cd03333 2 ELLLQVATTSLNSKLSSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDSELVVGVVFDKGYASPYMPKRLE 81 (209)
T ss_pred hHHHHHHHHHhccchhhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhceeEeeEEEeccccCCCCCeEcC
Confidence 468899988887 678999999999999987 234444 1 789
Q ss_pred CcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHh
Q 014070 135 GALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILT 214 (431)
Q Consensus 135 np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~t 214 (431)
||+|+++++++.. ++++.++|++.++++|..+ +|++|+. .++++|+|||++|
T Consensus 82 n~~Ill~~~~le~-----------------vii~~~~I~~~al~~l~~~------~I~~v~~-----~~~~~l~~ia~~t 133 (209)
T cd03333 82 NAKILLLDCPLEY-----------------VVIAEKGIDDLALHYLAKA------GIMAVRR-----VKKEDLERIARAT 133 (209)
T ss_pred CCcEEEEeCCeeE-----------------EEEecCcccHHHHHHHHHC------CCEEEEe-----CCHHHHHHHHHHH
Confidence 9999999998876 6776778999999988763 5688885 5677899999999
Q ss_pred CCeEeeCCCCCCccCCCCCCceeccEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeE
Q 014070 215 GGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYA 291 (431)
Q Consensus 215 G~~iis~~~~~~l~~~~~~~LG~~~~v~v~---~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~ 291 (431)
||+++++ ++++++++||+|+.|++. ++.++++.+|.. ++.|
T Consensus 134 ga~ii~~-----~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~-------------------------------~~~~ 177 (209)
T cd03333 134 GATIVSS-----LEDLTPEDLGTAELVEETKIGEEKLTFIEGCKG-------------------------------GKAA 177 (209)
T ss_pred CCEEecc-----cccCChhhceeeeEEEEEEECCeEEEEEEcCCC-------------------------------CCEE
Confidence 9999987 788899999999999874 345888888755 2679
Q ss_pred EEEeccCchhHHHHHHHHHhhHHHHHHHHHHc
Q 014070 292 VLKVCGHGKAEVREKKLKITNALHAVQAAKEE 323 (431)
Q Consensus 292 tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~ 323 (431)
||++||+|+++++|.||+++||++++++++++
T Consensus 178 tIllrG~t~~~l~e~kr~l~dal~~~~~~~~~ 209 (209)
T cd03333 178 TILLRGATEVELDEVKRSLHDALCAVRAAVEE 209 (209)
T ss_pred EEEEECCCHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999864
No 44
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=99.85 E-value=3.6e-20 Score=180.12 Aligned_cols=147 Identities=12% Similarity=0.182 Sum_probs=122.0
Q ss_pred EEeCcEEEEeccccCC------HHH-----------HHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEE
Q 014070 132 VLDGALVLIYDTKISN------SNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCII 194 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~------~~~-----------~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~av 194 (431)
+++||+|+++++++.. +++ +...++++...|.+++++.++|++.++++|..+ +|+++
T Consensus 83 ~i~n~kIlll~~~Le~~~~~~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nvIl~~k~I~~~a~~~l~k~------gI~~v 156 (261)
T cd03334 83 KIKNPRILLLQGPLEYQRVENKLLSLDPVILQEKEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEA------GITLV 156 (261)
T ss_pred ccCCCcEEEEeeeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccCHHHHHHHHHC------CCEEE
Confidence 6799999999986632 222 344567888999999999999999999998864 46788
Q ss_pred eccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEe---c-----ceEEEEcCCCChhhHHHHHHH
Q 014070 195 KAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---M-----DNVVIIGGSGELVDIQERCEQ 266 (431)
Q Consensus 195 k~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~---~-----~~~~~i~~~~~~~~i~~r~~~ 266 (431)
+. .++++|++||++|||+++++- .+++++++||+|+.|++. + ++++++++|+.+
T Consensus 157 ~~-----v~~~dl~rIa~~tGa~ii~~i----~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~~--------- 218 (261)
T cd03334 157 LN-----VKPSVLERISRCTGADIISSM----DDLLTSPKLGTCESFRVRTYVEEHGRSKTLMFFEGCPKE--------- 218 (261)
T ss_pred Ee-----cCHHHHHHHHHHhCCEEecCh----hhhcCcccCcCcceEEEEEecCcCCCceeEEEEecCCCC---------
Confidence 74 456789999999999999861 247888999999999863 2 579999998764
Q ss_pred HHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC
Q 014070 267 LRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG 324 (431)
Q Consensus 267 l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g 324 (431)
+.+||+|||+|++.++|.||+++||+++++++..++
T Consensus 219 ----------------------~~~TIlLRG~t~~~lde~eR~i~Dal~v~~~~~le~ 254 (261)
T cd03334 219 ----------------------LGCTILLRGGDLEELKKVKRVVEFMVFAAYHLKLET 254 (261)
T ss_pred ----------------------ceeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 468999999999999999999999999999987764
No 45
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=97.90 E-value=8.7e-05 Score=84.68 Aligned_cols=155 Identities=14% Similarity=0.242 Sum_probs=113.7
Q ss_pred EEeCcEEEEeccc---------cCCHHH--------HHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEE
Q 014070 132 VLDGALVLIYDTK---------ISNSNV--------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCII 194 (431)
Q Consensus 132 ~l~np~Ill~d~~---------i~~~~~--------~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~av 194 (431)
++++|+|+++.+. +.+.+. +...+..|.....+++++.+++++.|..+|.. +++.-++
T Consensus 397 ~~e~prilll~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~vllVeksVS~~aqe~L~~---k~I~lvl-- 471 (1598)
T KOG0230|consen 397 KYENPRILLLGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPDVLLVEKSVSRIAQELLLD---KGISLVL-- 471 (1598)
T ss_pred hccCCceEEEecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCCeEEEechHHHHHHHHhhc---cCeEEEE--
Confidence 8999999998652 333332 23344555555556888899999999998764 2322122
Q ss_pred eccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEe--------cceEEEEcCCCChhhHHHHHHH
Q 014070 195 KAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT--------MDNVVIIGGSGELVDIQERCEQ 266 (431)
Q Consensus 195 k~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~--------~~~~~~i~~~~~~~~i~~r~~~ 266 (431)
+.+...|+||++.||+.|+.+ ++.++.-.||+|..+++. ...++|++||..+.
T Consensus 472 ------nvK~s~leRIsR~tga~I~~s-----iDslt~~klg~C~~F~v~~~~e~hk~sKTlmffegc~~~l-------- 532 (1598)
T KOG0230|consen 472 ------NVKRSLLERISRCTGADIVPS-----VDSLTSQKLGYCELFRVENYVEEHKPSKTLMFFEGCPKPL-------- 532 (1598)
T ss_pred ------eccHHHHHHHHHHhcCceecc-----hhhhhccccCCCccHhhhhhhhcccchhhhHHhhcCCCCC--------
Confidence 455667999999999999976 777888899999998763 12357889987752
Q ss_pred HHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHH-HHHHcCCCCCccHHH
Q 014070 267 LRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ-AAKEEGIVPGSGVAL 333 (431)
Q Consensus 267 l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r-~al~~gvVpGGGa~e 333 (431)
| |||++||++..++++.++-+.-.+-++= .+++..++.--|+..
T Consensus 533 ---------------------G--~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~asi 577 (1598)
T KOG0230|consen 533 ---------------------G--CTILLRGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGASI 577 (1598)
T ss_pred ---------------------C--ceEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCcc
Confidence 3 7999999999999999999988877664 556666666655544
No 46
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=91.81 E-value=3.1 Score=44.79 Aligned_cols=103 Identities=14% Similarity=0.188 Sum_probs=75.0
Q ss_pred HHHHHHhcCCc-EEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhH-HHHHHHhCCeEeeCCCCCCccCCC
Q 014070 154 ASLPCMMQGQS-LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIM-EDLAILTGGQVLTGGSGMNSTYFV 231 (431)
Q Consensus 154 ~le~i~~~~~~-lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~l-e~la~~tG~~iis~~~~~~l~~~~ 231 (431)
..+.+.+.|.+ +++++++|+|.+.++|..+ .|.+++.+ .++++ ++|+.+|||++++. +++.+
T Consensus 262 ~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~------~Ilt~~~v-----~~~dl~~~l~~~~ga~~v~~-----~~d~t 325 (524)
T COG0459 262 LVVNILRGGANVVVVKAPGIDDLAKAYLEDI------AILTGRRV-----KKEDLGERLAKLGGAKIVSV-----LKDLT 325 (524)
T ss_pred HHHHHHhcCCCEEEEECCCCcHHHHHHHHhh------cceeccee-----cchhhHHHHHHccCceEEee-----cccCc
Confidence 34566778999 7888999999999998864 34566543 45567 79999999999987 79999
Q ss_pred CCCcee--ccEEEE---ecceEEEEcCCCC--------------hhhHHHHHHHHHHHhh
Q 014070 232 PLKLGS--CKRVIA---TMDNVVIIGGSGE--------------LVDIQERCEQLRSTIK 272 (431)
Q Consensus 232 ~~~LG~--~~~v~v---~~~~~~~i~~~~~--------------~~~i~~r~~~l~~~l~ 272 (431)
+..+|. |+.|+. ++++++++.+|.+ ...++++-+.+++.|.
T Consensus 326 ~~~~G~~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~tI~vrgate~~ldE~er~i~DAL~ 385 (524)
T COG0459 326 TIVLGEGAAGLVEETKTGDYDMEKLQERKAKAGGVATILVRGATEVELDEKERRIEDALN 385 (524)
T ss_pred eeecCccccceEEEeeccchhhhhhhhhhhcCCCeEEEEECCccHhHHHHHHHHHHHHHH
Confidence 999999 999875 3455566655543 3445555555555553
No 47
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=41.95 E-value=11 Score=40.62 Aligned_cols=59 Identities=19% Similarity=0.171 Sum_probs=48.2
Q ss_pred CCcEEEEecCcch-----hHHHHHHHhccCC----CCcEEEEeccCcccchhhhHHHHHHHhCCeEeeC
Q 014070 162 GQSLLVVAEDVEN-----EVLGDIATDFTCT----TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTG 221 (431)
Q Consensus 162 ~~~lvii~~~i~~-----~al~~l~~n~~~~----~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~ 221 (431)
..|+.++.+++++ +++..++.|+.++ +.++++++.| +++.+.++|++..+.++.++...
T Consensus 247 ~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~-i~d~~~~~L~~~~I~~~~~v~~~ 314 (522)
T TIGR02345 247 KDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLP-IGDLATQYFADHNIFCAGRVSDE 314 (522)
T ss_pred ccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCC-ccHHHHHHHHHCCcEEEecCCHH
Confidence 3477888888888 8888888888665 3488999988 99999999999999999887754
No 48
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=40.98 E-value=97 Score=24.89 Aligned_cols=53 Identities=17% Similarity=0.139 Sum_probs=32.7
Q ss_pred HHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCe
Q 014070 155 SLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQ 217 (431)
Q Consensus 155 le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~ 217 (431)
+..+.+....+|++++|+++.....+..--.+..+.++-| | .+++|.++||-.
T Consensus 22 ~Kai~kg~~~~v~iA~Da~~~vv~~l~~lceek~Ip~v~V--~--------s~~~LGkAcgi~ 74 (84)
T PRK13600 22 LKALKKDQVTSLIIAEDVEVYLMTRVLSQINQKNIPVSFF--K--------SKHALGKHVGIN 74 (84)
T ss_pred HHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEE--C--------CHHHHHHHhCCC
Confidence 3334444467899999999998876542222223444433 2 257888999854
No 49
>smart00574 POX domain associated with HOX domains.
Probab=39.56 E-value=78 Score=27.93 Aligned_cols=44 Identities=16% Similarity=0.224 Sum_probs=32.3
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHc-CCCCCccHHHHHHHHHHHhhc
Q 014070 301 AEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQ 344 (431)
Q Consensus 301 ~~l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~el~~s~~L~~~~ 344 (431)
..++|++++++--..-++..+.. ..|+|+|++-.+.+-+|+..+
T Consensus 84 ~mL~eVd~RY~qY~~qmq~v~ssFe~vaG~g~a~~yt~lAl~a~S 128 (140)
T smart00574 84 SMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTIS 128 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 47788888887777777766655 378999998888777775443
No 50
>PRK11058 GTPase HflX; Provisional
Probab=36.20 E-value=74 Score=33.35 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=57.3
Q ss_pred hhhhHHHHHHHhCCeEeeCCCCCCccCCCC-CCceeccEEE------EecceEEEEcCCCChhhHHH-------------
Q 014070 203 RKAIMEDLAILTGGQVLTGGSGMNSTYFVP-LKLGSCKRVI------ATMDNVVIIGGSGELVDIQE------------- 262 (431)
Q Consensus 203 r~~~le~la~~tG~~iis~~~~~~l~~~~~-~~LG~~~~v~------v~~~~~~~i~~~~~~~~i~~------------- 262 (431)
.-++|+.|+.++|..++.... -..+.+++ .++|+-+--+ ..+-+++++.+.-.|.+...
T Consensus 26 ~~~El~~L~~~~g~~v~~~~~-q~~~~~~~~~~~g~gk~~e~~~~~~~~~~~~vi~~~~lsp~q~~nle~~~~~~v~DR~ 104 (426)
T PRK11058 26 DLQEFESLVSSAGVEALQVIT-GSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRT 104 (426)
T ss_pred hHHHHHHHHHHCCCEEEEEEE-EecCCCCCCeeecccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHHHCCeEecch
Confidence 356788999999998887520 00122333 3566643211 12335677765444544322
Q ss_pred -------------HHHHHHHHhhhccc--hHHH---HHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHH
Q 014070 263 -------------RCEQLRSTIKLSTS--DKLK---DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAA 320 (431)
Q Consensus 263 -------------r~~~l~~~l~~~~~--~~l~---eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~a 320 (431)
|-..||-+|++..+ .+|. ..+.|..||+.+ ||+.+..++.-++.+.+=+..++..
T Consensus 105 ~lil~IF~~rA~t~e~klqvelA~l~y~~prl~~~~~~l~~~~gg~g~---~g~ge~~~e~d~r~i~~ri~~l~~~ 177 (426)
T PRK11058 105 GLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGL---RGPGETQLETDRRLLRNRIVQILSR 177 (426)
T ss_pred hHHHHHHHHhcCChHHHHHHHHHhhhhhhhhhhccccchhhhcCCCCC---CCCChhHhHHHHHHHHHHHHHHHHH
Confidence 22333333333333 2221 334444465543 7888887775555555544444433
No 51
>PF07818 HCNGP: HCNGP-like protein; InterPro: IPR012479 This family comprises sequences bearing significant similarity to the mouse transcriptional regulator protein HCNGP (Q02614 from SWISSPROT). This protein is localised to the nucleus and is thought to be involved in the regulation of beta-2-microglobulin genes.
Probab=32.74 E-value=61 Score=26.68 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=39.9
Q ss_pred HHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHH
Q 014070 364 AAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMIS 426 (431)
Q Consensus 364 ip~~La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~ 426 (431)
+-..|..|.++.--.+ ++|.. ++|+|- ++-++...||||...-.+++..+..-+.
T Consensus 30 fN~~L~~s~~frNP~i~ekLi~----~~~Ide----~gTn~p~~i~dP~~~~~~~y~e~L~k~Q 85 (96)
T PF07818_consen 30 FNDRLQNSKSFRNPSILEKLIE----FFGIDE----YGTNFPKDIFDPHGFPEEDYYEELAKAQ 85 (96)
T ss_pred HHHHHHHccccCChHHHHHHHH----HcCCCc----ccCCCChhhcCCCCCCHHHHHHHHHHHH
Confidence 3355667777665566 77765 467773 6677888899999999999888765544
No 52
>TIGR03156 GTP_HflX GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like).
Probab=27.94 E-value=1.9e+02 Score=29.35 Aligned_cols=57 Identities=16% Similarity=0.131 Sum_probs=30.4
Q ss_pred hhhhHHHHHHHhCCeEeeCCCCCCccCCCC-CCceecc--EEE----EecceEEEEcCCCChhhH
Q 014070 203 RKAIMEDLAILTGGQVLTGGSGMNSTYFVP-LKLGSCK--RVI----ATMDNVVIIGGSGELVDI 260 (431)
Q Consensus 203 r~~~le~la~~tG~~iis~~~~~~l~~~~~-~~LG~~~--~v~----v~~~~~~~i~~~~~~~~i 260 (431)
+-++++.|+.++|..++.... -+...+++ .++|+-+ ++. ..+-+++++.+.-.|.+.
T Consensus 18 ~~~E~~~L~~~~~~~v~~~~~-~~~~~~~~~~~~g~gk~~e~~~~~~~~~~~~vi~~~~l~p~q~ 81 (351)
T TIGR03156 18 SLEELAELAETAGAEVVGTVT-QKRSRPDPATYIGKGKVEEIAELVEELEADLVIFDHELSPSQE 81 (351)
T ss_pred hHHHHHHHHHHCCCEEEEEEE-EecCCCCCCeEecccHHHHHHHHHHhcCCCEEEECCCCCHHHH
Confidence 457788999999988886520 01122333 3566533 221 123346777654445443
No 53
>PF08406 CbbQ_C: CbbQ/NirQ/NorQ C-terminal ; InterPro: IPR013615 This domain is found at the C terminus of proteins of the CbbQ/NirQ/NorQ family of proteins which play a role in the post-translational activation of Rubisco []. It is also found in the Thauera aromaticaTutH protein which is similar to the CbbQ/NirQ/NorQ family [], as well as in putative chaperones. The ATPase domain associated with various cellular activities (AAA) IPR011704 from INTERPRO is found in the same bacterial and archaeal proteins as the domain described here.
Probab=25.31 E-value=2.4e+02 Score=22.60 Aligned_cols=51 Identities=6% Similarity=-0.153 Sum_probs=36.1
Q ss_pred hhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChH
Q 014070 15 INTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLT 67 (431)
Q Consensus 15 ~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~ 67 (431)
-.++|.-+..++-+++++.....-.|.|-..++ .-.+|-.+-+++. |++|.
T Consensus 6 ~~esgl~~~~a~~LV~~A~~iR~l~~~~L~e~~--STR~Li~~A~Li~~G~~~~ 57 (86)
T PF08406_consen 6 ARESGLDPEIAEKLVKLANAIRNLKGGGLEETV--STRLLIYAARLIAAGMDPR 57 (86)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCC--cHHHHHHHHHHHHcCCCHH
Confidence 356888999999999999988877666633222 3444455677888 99884
No 54
>PLN02512 acetylglutamate kinase
Probab=24.63 E-value=1.5e+02 Score=29.49 Aligned_cols=47 Identities=19% Similarity=0.265 Sum_probs=26.8
Q ss_pred HhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC--CCCCccH
Q 014070 283 LAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG--IVPGSGV 331 (431)
Q Consensus 283 l~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g--vVpGGGa 331 (431)
+.++.|++..|++||+.-..-+ ...++.+.+...+. .-.. +|.|||.
T Consensus 42 i~~~~~~tiVIKlGGs~i~d~~-~~~~~~~di~~l~~-~g~~iVlVHGgG~ 90 (309)
T PLN02512 42 IQRFRGKTVVVKYGGAAMKDPE-LKAGVIRDLVLLSC-VGLRPVLVHGGGP 90 (309)
T ss_pred HHHHCCCeEEEEECCeeccChh-HHHHHHHHHHHHHH-CCCCEEEEECCcH
Confidence 4467789999999998743322 22333333332221 1112 5899998
No 55
>PF07526 POX: Associated with HOX; InterPro: IPR006563 This domain in found exclusively in plant proteins, associated with HOX domains which may suggest these proteins are homeodomain transcription factors.
Probab=21.69 E-value=1.1e+02 Score=26.96 Aligned_cols=44 Identities=20% Similarity=0.225 Sum_probs=31.0
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHHHHhhc
Q 014070 301 AEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQ 344 (431)
Q Consensus 301 ~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~L~~~~ 344 (431)
..++|++++++--..=++..+..- .|.|.|++-.+.+-+|+..+
T Consensus 84 ~mL~eVd~RY~qY~~Qmq~VvssFe~vaG~gaA~~YtalAlqamS 128 (140)
T PF07526_consen 84 SMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAAPYTALALQAMS 128 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHHHHHHHH
Confidence 467777777777666666655543 68899998888877775443
No 56
>COG3962 Acetolactate synthase [Amino acid transport and metabolism]
Probab=20.66 E-value=47 Score=35.20 Aligned_cols=39 Identities=26% Similarity=0.330 Sum_probs=31.7
Q ss_pred HHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhcc
Q 014070 307 KLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQT 345 (431)
Q Consensus 307 ~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~ 345 (431)
+|.+.||+..+|++.+-=+|.|||+-+-.+...|..|+.
T Consensus 216 ~~eL~~A~~lik~ak~PlIvaGGGv~YS~A~~~L~af~E 254 (617)
T COG3962 216 ERELADAAALIKSAKKPLIVAGGGVLYSGAREALRAFAE 254 (617)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCceeechHHHHHHHHHH
Confidence 356788999999885555999999999888888887763
No 57
>KOG2144 consensus Tyrosyl-tRNA synthetase, cytoplasmic [Translation, ribosomal structure and biogenesis]
Probab=20.58 E-value=2e+02 Score=28.68 Aligned_cols=35 Identities=11% Similarity=0.175 Sum_probs=27.9
Q ss_pred HHHHHhhcc--CCChHHHHHHHHHHHHHHHHHHhhhc
Q 014070 54 NDEAFKALG--RANLTGLTQGFRMAADAVVRNLDCQA 88 (431)
Q Consensus 54 l~ea~~li~--g~~P~~I~~G~~~a~~~~l~~L~~~s 88 (431)
+++.++... -+||.++..|+..|++..++-+.+..
T Consensus 295 yed~e~~y~~~~lhPgDLK~~l~~alN~lL~~ir~~~ 331 (360)
T KOG2144|consen 295 YEDIEKDYEEGELHPGDLKKGLEKALNELLQPIREEF 331 (360)
T ss_pred HHHHHHHHHhCCcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555 59999999999999999999988643
Done!