Query 014070
Match_columns 431
No_of_seqs 123 out of 1365
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 04:57:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014070.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014070hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 4.1E-97 1E-101 780.9 38.2 417 12-431 53-514 (546)
2 1kp8_A Groel protein; chaperon 100.0 8.8E-96 3E-100 772.2 42.4 419 12-431 53-516 (547)
3 1we3_A CPN60(groel); chaperoni 100.0 5.3E-95 1.8E-99 766.8 44.4 419 12-431 53-518 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 1E-95 4E-100 772.0 35.5 420 12-431 54-518 (545)
5 3p9d_C T-complex protein 1 sub 100.0 9.1E-84 3.1E-88 685.4 32.7 403 12-431 62-579 (590)
6 3iyg_B T-complex protein 1 sub 100.0 3.1E-81 1.1E-85 659.3 40.5 373 12-431 55-504 (513)
7 3ruv_A Chaperonin, CPN; double 100.0 1.4E-80 4.6E-85 658.1 39.9 373 12-431 62-512 (543)
8 3ko1_A Chaperonin; 9-fold symm 100.0 1.1E-80 3.9E-85 659.2 38.9 373 12-431 73-526 (553)
9 3p9d_A T-complex protein 1 sub 100.0 6.7E-81 2.3E-85 662.1 34.7 378 12-431 67-541 (559)
10 3iyg_D T-complex protein 1 sub 100.0 4.6E-80 1.6E-84 651.1 40.4 374 12-431 54-511 (518)
11 3aq1_B Thermosome subunit; gro 100.0 1.7E-80 5.8E-85 651.8 35.8 373 12-431 16-469 (500)
12 1q3q_A Thermosome alpha subuni 100.0 7.7E-80 2.6E-84 653.0 38.6 373 12-431 66-518 (548)
13 3iyg_H T-complex protein 1 sub 100.0 1.5E-79 5E-84 646.5 39.8 373 12-431 54-507 (515)
14 1a6d_A Thermosome (alpha subun 100.0 8.6E-80 2.9E-84 652.2 36.9 372 12-431 65-515 (545)
15 3iyg_A T-complex protein 1 sub 100.0 1.6E-79 5.5E-84 648.4 38.7 378 12-431 53-521 (529)
16 1a6d_B Thermosome (beta subuni 100.0 1.2E-79 4.2E-84 651.2 37.4 373 12-431 64-516 (543)
17 3iyg_Q T-complex protein 1 sub 100.0 5.1E-79 1.8E-83 642.6 39.9 374 12-431 54-505 (512)
18 3p9d_D T-complex protein 1 sub 100.0 3.8E-80 1.3E-84 652.7 30.3 376 12-431 62-521 (528)
19 3iyg_E T-complex protein 1 sub 100.0 2E-78 6.8E-83 638.5 41.2 373 12-431 53-508 (515)
20 3p9d_B T-complex protein 1 sub 100.0 6.6E-80 2.3E-84 651.4 26.9 373 12-431 61-511 (527)
21 3iyg_G T-complex protein 1 sub 100.0 6.8E-78 2.3E-82 634.1 40.7 373 12-431 52-507 (515)
22 3p9d_E T-complex protein 1 sub 100.0 6.2E-78 2.1E-82 639.7 35.0 373 12-431 88-551 (562)
23 3iyg_Z T-complex protein 1 sub 100.0 1.5E-77 5E-82 631.5 37.1 372 12-431 53-510 (517)
24 3p9d_G T-complex protein 1 sub 100.0 1.1E-78 3.8E-83 644.0 25.7 373 12-431 67-520 (550)
25 3p9d_F T-complex protein 1 sub 100.0 1.9E-77 6.3E-82 634.8 28.6 373 12-431 60-530 (546)
26 3p9d_H T-complex protein 1 sub 100.0 1.9E-78 6.5E-83 644.4 20.5 375 12-431 69-541 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 3.5E-40 1.2E-44 297.8 12.6 162 132-293 29-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 5.9E-40 2E-44 296.9 13.7 161 132-292 36-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 1.5E-30 5.2E-35 224.7 12.5 122 132-253 23-144 (145)
30 1gml_A T-complex protein 1 sub 99.7 3.3E-17 1.1E-21 149.3 11.5 123 132-301 24-174 (178)
31 1ass_A Thermosome; chaperonin, 99.6 4.9E-15 1.7E-19 132.4 11.9 110 132-257 18-154 (159)
32 2f6m_A Suppressor protein STP2 21.1 69 0.0024 23.4 2.9 22 306-327 14-35 (65)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=4.1e-97 Score=780.86 Aligned_cols=417 Identities=33% Similarity=0.475 Sum_probs=390.4
Q ss_pred hHHhhhcCCcchH----HHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPVC----CTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~~----~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+-+++++..|||+ |+|++++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.++++|++
T Consensus 53 ~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~ 132 (546)
T 3rtk_A 53 VSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLK 132 (546)
T ss_dssp --------CCCHHHHHHHHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCChhhhHHHHHHHHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3467788999998 99999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE-----------------E------------------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI-----------------F------------------ 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i-----------------f------------------ 131 (431)
++.|+++.++|.++|++|++ ++.+++++++|+.+++++|.|+| |
T Consensus 133 ~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~ 211 (546)
T 3rtk_A 133 GAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEA 211 (546)
T ss_dssp TCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBE
T ss_pred hcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCee
Confidence 99999989999999999997 88999999999999999988777 2
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|++|+++++++++++++.++|+|+||++++|+++++++|+.|+++|.+++++||+|+||++|+++|+|||
T Consensus 212 ~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia 291 (546)
T 3rtk_A 212 VLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMA 291 (546)
T ss_dssp EEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHH
T ss_pred EecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||+++++++|++++++++++||+|++|++++++++|++||+++++++.|++||++++++++| ++|+||+++|+
T Consensus 292 ~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~ 371 (546)
T 3rtk_A 292 ILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLA 371 (546)
T ss_dssp HHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred HHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999887 99999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYL 367 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~AL~~ip~~ 367 (431)
|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|++++.+|++|+ .++++|+|+++|++||+.||++
T Consensus 372 g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~ALe~ip~~ 450 (546)
T 3rtk_A 372 GGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVALEAPLKQ 450 (546)
T ss_dssp HCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHHTTHHHHH
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999988 7899999999999999999999
Q ss_pred HHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 368 IASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 368 La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+|||+|+.++ .+|++. ...+|||+.+|++.||++.|||||+.||+++|++|+|+|++||+|
T Consensus 451 La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~i 514 (546)
T 3rtk_A 451 IAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTT 514 (546)
T ss_dssp HHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 999885 345999999999999999999999999999999999999999986
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=8.8e-96 Score=772.21 Aligned_cols=419 Identities=34% Similarity=0.486 Sum_probs=406.2
Q ss_pred hHHhhhcCCcch----HHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPV----CCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~----~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+.++.++..+|| +|+|++++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.+++.|++
T Consensus 53 ~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~ 132 (547)
T 1kp8_A 53 VSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKA 132 (547)
T ss_dssp HHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccccChhhhHHHHHHHHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999 999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE-----------------E------------------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI-----------------F------------------ 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i-----------------f------------------ 131 (431)
+++|+++.++|.++|++|+++++++++++++|+.+++++|.|+| |
T Consensus 133 ~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~ 212 (547)
T 1kp8_A 133 LSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAV 212 (547)
T ss_dssp HCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBE
T ss_pred hCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCce
Confidence 99999989999999999998899999999999999998887766 2
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|++|++++++.++++++.++|+|+||++++|+++++++|+.|+++|.++|+|||+|+||++|+++|+|||
T Consensus 213 ~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia 292 (547)
T 1kp8_A 213 ELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIA 292 (547)
T ss_dssp EEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHH
T ss_pred EecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||+++++++|++++++++++||+|+.|++++++|+|++||+++++++.|++||+.+++.++| ++|+||+++|+
T Consensus 293 ~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~ 372 (547)
T 1kp8_A 293 TLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLA 372 (547)
T ss_dssp HHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHH
T ss_pred HHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhc
Confidence 99999999998999999999999999999999999999999999999999999999999999887 99999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYL 367 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~AL~~ip~~ 367 (431)
|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|++++.+|++++..++++|+|+++|++||+.||++
T Consensus 373 ~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~ 452 (547)
T 1kp8_A 373 GGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRAMEAPLRQ 452 (547)
T ss_dssp HCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHHHHH
T ss_pred CCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998766889999999999999999999
Q ss_pred HHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 368 IASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 368 La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+|||+|+.++ .+|++. +.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 453 la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~i 516 (547)
T 1kp8_A 453 IVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITT 516 (547)
T ss_dssp HHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhH
Confidence 999999999999 999875 468999999999999999999999999999999999999999986
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=5.3e-95 Score=766.82 Aligned_cols=419 Identities=35% Similarity=0.508 Sum_probs=405.7
Q ss_pred hHHhhhcCCcch----HHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPV----CCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~----~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+.++.++..+|| +|+|++++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.+++.|++
T Consensus 53 ~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~ 132 (543)
T 1we3_A 53 VTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKA 132 (543)
T ss_dssp HHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcccCChHHhHHHHHHHHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999 999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE-----------------E------------------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI-----------------F------------------ 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i-----------------f------------------ 131 (431)
++.|+++.++|.++|++|++ ++++++++++|+.+++++|.|+| |
T Consensus 133 ~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~ 211 (543)
T 1we3_A 133 LAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEA 211 (543)
T ss_dssp TCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBC
T ss_pred hcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCce
Confidence 99999989999999999997 89999999999999998877665 2
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|++|++++++.++++++.++|+|+||++++|+++++++|+.|+++|.++|+|||+|+||++|+++|+|||
T Consensus 212 ~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia 291 (543)
T 1we3_A 212 VLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIA 291 (543)
T ss_dssp CEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHH
T ss_pred eecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||++++++.|++++++++++||+|+.|++++++++|++||+++++++.|++||+.+++.++| ++|+||+++|+
T Consensus 292 ~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~ 371 (543)
T 1we3_A 292 AVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLA 371 (543)
T ss_dssp HHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHT
T ss_pred HHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999887 99999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAY 366 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~ 366 (431)
|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|++++.+|++++.+ ++++|+|+++|++||+.||+
T Consensus 372 ~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~ 451 (543)
T 1we3_A 372 GGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPAR 451 (543)
T ss_dssp TCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHH
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999886 89999999999999999999
Q ss_pred HHHHhcCCChHHH-HHHHhc-CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 367 LIASNAGVDGSVI-DKLLEQ-DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 367 ~La~NaG~d~~~v-~kl~~~-~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
+||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 452 ~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 518 (543)
T 1we3_A 452 QIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTT 518 (543)
T ss_dssp HHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 999874 4567999999999999999999999999999999999999999986
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1e-95 Score=771.97 Aligned_cols=420 Identities=36% Similarity=0.523 Sum_probs=363.6
Q ss_pred hHHhhhcCCcch----HHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh
Q 014070 12 VRLINTTGTQPV----CCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC 86 (431)
Q Consensus 12 ~~~~~~~~~~~~----~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~ 86 (431)
+.+++++..+|| +|+|++++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.+++.|++
T Consensus 54 ~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~ 133 (545)
T 1iok_A 54 VSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKS 133 (545)
T ss_dssp HHHHHHCCCSSHHHHHHHHHHHHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhccCChhhHHHHHHHHHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999 999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred hcccCCCHHHHHHHHhhccCCchhHHHHHHHHHHhhccCCceeE-----------------E------------------
Q 014070 87 QARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITI-----------------F------------------ 131 (431)
Q Consensus 87 ~s~~v~~~~~l~~vA~~s~~~~~~la~li~~A~~~vg~~~~i~i-----------------f------------------ 131 (431)
++.|+++.++|.++|++|+++++++++++++|+.+++++|.|+| |
T Consensus 134 ~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~ 213 (545)
T 1iok_A 134 AARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIA 213 (545)
T ss_dssp TCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCE
T ss_pred hcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCce
Confidence 99999888899999999998899999999999999998876655 1
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|++|++++++.++++++.++|+|+||++++|+++++++|+.|+++|.++|+|||+|+||++|+++|+|||
T Consensus 214 ~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia 293 (545)
T 1iok_A 214 ELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIA 293 (545)
T ss_dssp EEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHH
T ss_pred eecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
++|||+++++++|++++++++++||+|+.|++++++|+|++||++++++++|++|++.+++.++| ++|+||+++|+
T Consensus 294 ~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~ 373 (545)
T 1iok_A 294 ILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLA 373 (545)
T ss_dssp HHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTS
T ss_pred HhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999998887 99999999999
Q ss_pred CCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcCCCCCccHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHH
Q 014070 288 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYL 367 (431)
Q Consensus 288 g~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~gvVpGGGa~el~~s~~L~~~~~~~~~~~~gi~~~a~AL~~ip~~ 367 (431)
|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|++++.+|++++..++++|+|+++|++||+.||++
T Consensus 374 ~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~ 453 (545)
T 1iok_A 374 GGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQ 453 (545)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHHTTHHHHH
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998766889999999999999999999
Q ss_pred HHHhcCCChHHH-HHHHhcCCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 368 IASNAGVDGSVI-DKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 368 La~NaG~d~~~v-~kl~~~~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+|||+|+.++ .+|++..++++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 454 La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~i 518 (545)
T 1iok_A 454 IAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITT 518 (545)
T ss_dssp HHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999 9999764578999999999999999999999999999999999999999986
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=9.1e-84 Score=685.38 Aligned_cols=403 Identities=13% Similarity=0.135 Sum_probs=337.2
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhh-cc-CCChHHHHHHHHHHHHHHHHHHhhhcc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKA-LG-RANLTGLTQGFRMAADAVVRNLDCQAR 89 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~l-i~-g~~P~~I~~G~~~a~~~~l~~L~~~s~ 89 (431)
+.++.++..+||+|+|++++|++||+++||||||+||||++||++|+++ +. |+||+.|++||++|++.++++|++++.
T Consensus 62 ~TIlk~i~~~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~ 141 (590)
T 3p9d_C 62 HAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSK 141 (590)
T ss_dssp HHHHHHSCCCCHHHHTHHHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhhCCCHHHHHHHHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5678899999999999999999999999999999999999999999999 99 999999999999999999999999999
Q ss_pred cCCC--HHHHHHHHhhccC------CchhHHHHHHHHHHhhccCCc----------------eeE---------------
Q 014070 90 KITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWENDL----------------ITI--------------- 130 (431)
Q Consensus 90 ~v~~--~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~~~~----------------i~i--------------- 130 (431)
|++. .++|.++|++|.+ ++++|++++++|+.++++++. |+|
T Consensus 142 ~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~ 221 (590)
T 3p9d_C 142 PVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLK 221 (590)
T ss_dssp TTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCS
T ss_pred ccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeee
Confidence 9873 6789999987743 468999999999999987642 223
Q ss_pred ---E-----------EEeCcEEEEeccc-------------cCCHHHHHHHH-----------HHHHhcCCcEEEEecCc
Q 014070 131 ---F-----------VLDGALVLIYDTK-------------ISNSNVIRQAS-----------LPCMMQGQSLLVVAEDV 172 (431)
Q Consensus 131 ---f-----------~l~np~Ill~d~~-------------i~~~~~~~~~l-----------e~i~~~~~~lvii~~~i 172 (431)
| +++||+|+++|++ |++++++.+++ +++.+.|.+++|+.++|
T Consensus 222 Gmvfdk~~~~~~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I 301 (590)
T 3p9d_C 222 GVLLNKDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGV 301 (590)
T ss_dssp SEEECCCCSCTTSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCC
T ss_pred EEEEecccCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCc
Confidence 2 7899999999983 56677777765 57888885555555679
Q ss_pred chhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCcee-ccEEE---EecceE
Q 014070 173 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVI---ATMDNV 248 (431)
Q Consensus 173 ~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~-~~~v~---v~~~~~ 248 (431)
+++++++|..|+ |++ +++.++.+|+|||++|||+++++ ++++++++||+ |+.|+ +++++|
T Consensus 302 ~d~Al~~L~k~~------I~a-----v~~~~k~~le~ia~~TGa~iis~-----l~~~~~~~LG~~a~~v~~~~ig~d~~ 365 (590)
T 3p9d_C 302 SDLAQHYLLKGG------CSV-----LRRVKKSDNNRIARVTGATIVNR-----VEDLKESDVGTNCGLFKVEMIGDEYF 365 (590)
T ss_dssp CTHHHHHHHHTT------CCC-----CCCCCHHHHHHHHHHHTCCCCSC-----STTCCTTSCBCCCSEEECCEETTEEC
T ss_pred CHHHHHHHHhcc------cee-----eccCCHHHHHHHHHHhCCceeec-----ccCCCHHHhCCcCCEEEEEEEcCcEE
Confidence 999999998764 334 56888999999999999999986 89999999999 99996 578999
Q ss_pred EEEcCCCChhh--------------------------HHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhH
Q 014070 249 VIIGGSGELVD--------------------------IQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAE 302 (431)
Q Consensus 249 ~~i~~~~~~~~--------------------------i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~ 302 (431)
+|++||++++. ++.|+++|+.+++.++|+- .+++++|+||+|||+|||+|+++
T Consensus 366 ~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~-~~~~~~l~ggv~tI~lrg~te~~ 444 (590)
T 3p9d_C 366 SFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHH-HHHHHHGSGKACTIMLRGGSKDI 444 (590)
T ss_dssp EEECC----------------------------------------------------------CCCSCCCEEEECSSTTT
T ss_pred EEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHH-HHHHHhhcCCeeEEEEcCCCHHH
Confidence 99999999988 9999999999999888733 35579999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHc-CCCCCccHHHHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-
Q 014070 303 VREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI- 379 (431)
Q Consensus 303 l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v- 379 (431)
++|+||++|||||++|+++++ |+|||||++|++++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++
T Consensus 445 l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv 524 (590)
T 3p9d_C 445 LNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLL 524 (590)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 999999999999999999998 59999999999999999999766 999999999999999999999999999999999
Q ss_pred HHHHhc---CCCCeeEeCCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 380 DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 380 ~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
.+|++. +++++|||+.+|++.||++.|||||+.||+++|++|+|+|+|||+|
T Consensus 525 ~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 579 (590)
T 3p9d_C 525 SQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRV 579 (590)
T ss_dssp HHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHH
Confidence 999874 5678999999999999999999999999999999999999999986
No 6
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=3.1e-81 Score=659.26 Aligned_cols=373 Identities=17% Similarity=0.222 Sum_probs=343.9
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-++.+|..|||+|+|++++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++|++++.|
T Consensus 55 ~tIlk~i~v~hp~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 134 (513)
T 3iyg_B 55 ATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVD 134 (513)
T ss_pred HHHHHHccccCHHHHHHHHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC-----CHHHHHHHHhhccC------CchhHHHHHHHHHHhhccC---CceeE------------------E-------
Q 014070 91 IT-----TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITI------------------F------- 131 (431)
Q Consensus 91 v~-----~~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~~---~~i~i------------------f------- 131 (431)
++ +.++|.++|++|.+ ++++|++++++|+.+++++ +.|+| |
T Consensus 135 v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~ 214 (513)
T 3iyg_B 135 HGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN 214 (513)
T ss_pred cccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC
Confidence 86 46789999986653 4679999999999999987 66655 2
Q ss_pred ---EEeCcEEEEecc--------------ccCCHHHHHH-----------HHHHHHhcCCcEEEEecCcchhHHHHHHHh
Q 014070 132 ---VLDGALVLIYDT--------------KISNSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENEVLGDIATD 183 (431)
Q Consensus 132 ---~l~np~Ill~d~--------------~i~~~~~~~~-----------~le~i~~~~~~lvii~~~i~~~al~~l~~n 183 (431)
+++||+|+++|+ +|++++++.+ .++++.+.|+|+||++++|+++++++|..
T Consensus 215 m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~- 293 (513)
T 3iyg_B 215 QPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGA- 293 (513)
T ss_pred CceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHH-
Confidence 689999999998 5778877765 57889999999999999999999999885
Q ss_pred ccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEE---EecceEEEEcCCCChhhH
Q 014070 184 FTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDI 260 (431)
Q Consensus 184 ~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~---v~~~~~~~i~~~~~~~~i 260 (431)
.+|++||+|++. +|+|||++|||+++++ ++++++++||+|+.|+ ++++++++++||++
T Consensus 294 -----~~I~av~~~~~~-----~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---- 354 (513)
T 3iyg_B 294 -----AGVMAIEHADFV-----GVERLALVTGGEIAST-----FDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL---- 354 (513)
T ss_pred -----cCceEEecCCHH-----HHHHHHHHhCCEEecc-----cccCCHhHCCcccEEEEEEECCeEEEEEecCCC----
Confidence 467999998754 6999999999999996 8999999999999997 67899999999876
Q ss_pred HHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHc-CCCCCccHHHHHHHHH
Q 014070 261 QERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKE 339 (431)
Q Consensus 261 ~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~el~~s~~ 339 (431)
+++|||+|||+|+++++|+||++|||||++|+++++ ++|||||++|++++.+
T Consensus 355 ---------------------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~ 407 (513)
T 3iyg_B 355 ---------------------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHA 407 (513)
T ss_pred ---------------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHH
Confidence 368999999999999999999999999999999998 6999999999999999
Q ss_pred HHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccccH
Q 014070 340 LDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHV 414 (431)
Q Consensus 340 L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~vk 414 (431)
|++|+.+ ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.||
T Consensus 408 L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk 487 (513)
T 3iyg_B 408 VTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVK 487 (513)
T ss_pred HHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHH
Confidence 9999877 999999999999999999999999999999999 999874 45679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC
Q 014070 415 PSEFAKATSMISLKNAI 431 (431)
Q Consensus 415 ~~ai~~A~~~a~~iL~i 431 (431)
+++|++|+|+|++||+|
T Consensus 488 ~~al~~A~~~a~~iL~i 504 (513)
T 3iyg_B 488 RQVLLSAAEAAEVILRV 504 (513)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999986
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.4e-80 Score=658.11 Aligned_cols=373 Identities=19% Similarity=0.250 Sum_probs=344.2
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-++.++..|||+|+|++++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.++++|++++.|
T Consensus 62 ~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 141 (543)
T 3ruv_A 62 VTILREMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACE 141 (543)
T ss_dssp HHHHHHSCCCCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHccCcCHHHHHHHHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC--CHHHHHHHHhhccCC------chhHHHHHHHHHHhhccC-Cc-----eeE------------------E-------
Q 014070 91 IT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-DL-----ITI------------------F------- 131 (431)
Q Consensus 91 v~--~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~-~~-----i~i------------------f------- 131 (431)
++ +.++|.++|++|+++ +++|++++++|+.+++++ |. |+| |
T Consensus 142 v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~ 221 (543)
T 3ruv_A 142 VGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSA 221 (543)
T ss_dssp CCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCT
T ss_pred CCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCc
Confidence 87 788999999998763 789999999999999987 65 554 2
Q ss_pred ----EEeCcEEEEecc-------------ccCCHHH-----------HHHHHHHHHhcCCcEEEEecCcchhHHHHHHHh
Q 014070 132 ----VLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATD 183 (431)
Q Consensus 132 ----~l~np~Ill~d~-------------~i~~~~~-----------~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n 183 (431)
+++||+|+++|+ +|+++++ +.+.++++.+.|+|+||++++|+++++++|..+
T Consensus 222 ~m~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~ 301 (543)
T 3ruv_A 222 QMPKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE 301 (543)
T ss_dssp TSCSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT
T ss_pred cccccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc
Confidence 889999999998 4677766 556678899999999999999999999999743
Q ss_pred ccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEe---cceEEEEcCCCChhhH
Q 014070 184 FTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDI 260 (431)
Q Consensus 184 ~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~---~~~~~~i~~~~~~~~i 260 (431)
++++|+ +.++++|+|||++|||+++++ ++++++++||+|+.|++. +++|+|++||+++
T Consensus 302 ------gI~~v~-----~v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~--- 362 (543)
T 3ruv_A 302 ------GIVAAR-----RVKKSDMEKLAKATGANVIAA-----IAALSAQDLGDAGLVEERKISGDSMIFVEECKHP--- 362 (543)
T ss_dssp ------TCEEEC-----SCCHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC---
T ss_pred ------CcEEEe-----eCCHHHHHHHHHHhCCceecc-----cccCCHHHCCcccEEEEEEeCCceEEEEECCCCC---
Confidence 456777 457889999999999999996 899999999999999875 8899999999885
Q ss_pred HHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHH
Q 014070 261 QERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKE 339 (431)
Q Consensus 261 ~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~ 339 (431)
..+||+|||+|+++++|+||++|||||++|+++++| +|||||++|++++.+
T Consensus 363 ----------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~ 414 (543)
T 3ruv_A 363 ----------------------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMK 414 (543)
T ss_dssp ----------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHH
T ss_pred ----------------------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHH
Confidence 458999999999999999999999999999999999 999999999999999
Q ss_pred HHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccccccccCccccccc
Q 014070 340 LDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYVDMFKCGDVDPLKH 413 (431)
Q Consensus 340 L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~----~~~~~G~d~~~g~~~d~~~~gI~DP~~v 413 (431)
|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.|
T Consensus 415 L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~v 494 (543)
T 3ruv_A 415 LREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRV 494 (543)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHH
T ss_pred HHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHH
Confidence 9999877 999999999999999999999999999999999 999863 3468999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 014070 414 VPSEFAKATSMISLKNAI 431 (431)
Q Consensus 414 k~~ai~~A~~~a~~iL~i 431 (431)
|+++|++|+|+|++||+|
T Consensus 495 k~~al~~A~~~a~~iL~i 512 (543)
T 3ruv_A 495 KTQAIQSAAESTEMLLRI 512 (543)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhH
Confidence 999999999999999997
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.1e-80 Score=659.18 Aligned_cols=373 Identities=19% Similarity=0.266 Sum_probs=344.6
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-++.+|..|||+|+|++++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.++++|++++.|
T Consensus 73 ~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 152 (553)
T 3ko1_A 73 ATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQT 152 (553)
T ss_dssp HHHHHSSCCCSHHHHHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred cchhhhhhccChhHHHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCC
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC--CHHHHHHHHhhccCC------chhHHHHHHHHHHhhccC--Cc-------eeE------------------E----
Q 014070 91 IT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL-------ITI------------------F---- 131 (431)
Q Consensus 91 v~--~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~--~~-------i~i------------------f---- 131 (431)
++ +.++|.++|++|+++ +++|++++++|+.+++++ |. |+| |
T Consensus 153 v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~ 232 (553)
T 3ko1_A 153 VSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEV 232 (553)
T ss_dssp CCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCB
T ss_pred CCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccc
Confidence 87 788999999999875 689999999999999875 65 555 2
Q ss_pred -------EEeCcEEEEecc-------------ccCCHHH-----------HHHHHHHHHhcCCcEEEEecCcchhHHHHH
Q 014070 132 -------VLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDI 180 (431)
Q Consensus 132 -------~l~np~Ill~d~-------------~i~~~~~-----------~~~~le~i~~~~~~lvii~~~i~~~al~~l 180 (431)
+++||+|+++|+ +|+++++ +.+.++++.+.|+|+||++++|+++++++|
T Consensus 233 ~~~~m~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L 312 (553)
T 3ko1_A 233 VHPGMPKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYL 312 (553)
T ss_dssp SCTTSCSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHH
T ss_pred cCCCCccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHH
Confidence 789999999998 5778877 456678899999999999999999999999
Q ss_pred HHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEe---cceEEEEcCCCCh
Q 014070 181 ATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGEL 257 (431)
Q Consensus 181 ~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~---~~~~~~i~~~~~~ 257 (431)
..+ ++++|+ +.++++|+|||++|||+++++ ++++++++||+|+.|++. +++|+|++||+++
T Consensus 313 ~~~------gI~~v~-----~v~k~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~ 376 (553)
T 3ko1_A 313 AKK------GVLAVR-----RAKKSDLEKLARATGGRVVSN-----IDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP 376 (553)
T ss_dssp HHH------TCEEEC-----CCCHHHHHHHHTTTTCCEESC-----GGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS
T ss_pred Hhc------chhhhh-----hhhhhhHHHHHHhhCCeeecc-----cccCChhhcchHHHHHHhhcCcceEEEeccCCCC
Confidence 853 356777 457889999999999999996 899999999999999874 8899999999885
Q ss_pred hhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHH
Q 014070 258 VDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYA 336 (431)
Q Consensus 258 ~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~ 336 (431)
..+||+|||+|+++++|+||++|||||++|+++++| +|||||++|+++
T Consensus 377 -------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~ 425 (553)
T 3ko1_A 377 -------------------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEI 425 (553)
T ss_dssp -------------------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHH
T ss_pred -------------------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHH
Confidence 468999999999999999999999999999999999 999999999999
Q ss_pred HHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC-CCeeEeCCCCccccccccCcccc
Q 014070 337 SKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS-SDLGYNPARGNYVDMFKCGDVDP 410 (431)
Q Consensus 337 s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~-~~~G~d~~~g~~~d~~~~gI~DP 410 (431)
+.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++ .++|||+.+|++.||++.|||||
T Consensus 426 s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp 505 (553)
T 3ko1_A 426 AKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEP 505 (553)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEE
T ss_pred HHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccch
Confidence 9999999877 999999999999999999999999999999999 999874 23 67999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHhcC
Q 014070 411 LKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 411 ~~vk~~ai~~A~~~a~~iL~i 431 (431)
+.||+++|++|+++|++||+|
T Consensus 506 ~~vk~~al~~A~e~a~~iL~i 526 (553)
T 3ko1_A 506 ALVKMNAIKAATEAATLVLRI 526 (553)
T ss_dssp TTHHHHHHHHHHHHHHHHHHE
T ss_pred hhhhhhhhhhcchhheEEEeh
Confidence 999999999999999999986
No 9
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=6.7e-81 Score=662.11 Aligned_cols=378 Identities=16% Similarity=0.246 Sum_probs=346.1
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh-hcc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC-QAR 89 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~-~s~ 89 (431)
+-++.+|..|||+|+|++++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++|++ ++.
T Consensus 67 ~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~ 146 (559)
T 3p9d_A 67 ATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLST 146 (559)
T ss_dssp HHHHHHHCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 567889999999999999999999999999999999999999999999999 999999999999999999999999 999
Q ss_pred cCCC--HHHHHHHHhhccCC------chhHHHHHHHHHHhhcc-----CCc-----eeE------------------E--
Q 014070 90 KITT--FEEIAQVGTTAANG------DGEIGELIAKVFEKGWE-----NDL-----ITI------------------F-- 131 (431)
Q Consensus 90 ~v~~--~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~-----~~~-----i~i------------------f-- 131 (431)
|++. .++|.++|++|+++ +++|++++++|+.++++ ++. |+| |
T Consensus 147 ~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk 226 (559)
T 3p9d_A 147 SVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNC 226 (559)
T ss_dssp GSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCC
T ss_pred CCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEee
Confidence 9874 67899999999875 68999999999999983 244 323 1
Q ss_pred ---------EEe--CcEEEEecccc-------------CCHHH-----------HHHHHHHHHhcCCcEEEEecCcchhH
Q 014070 132 ---------VLD--GALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEV 176 (431)
Q Consensus 132 ---------~l~--np~Ill~d~~i-------------~~~~~-----------~~~~le~i~~~~~~lvii~~~i~~~a 176 (431)
+++ ||+|+++|+++ +++++ +.++++++.++|+|+||++++|++++
T Consensus 227 ~~~~~~m~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~a 306 (559)
T 3p9d_A 227 TVASQAMPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLC 306 (559)
T ss_dssp CCSSTTSCSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGG
T ss_pred cccCCCcceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHH
Confidence 788 99999999876 45544 67889999999999999999999999
Q ss_pred HHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCc-cCCCCCCceeccEEE---EecceEEEEc
Q 014070 177 LGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFVPLKLGSCKRVI---ATMDNVVIIG 252 (431)
Q Consensus 177 l~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l-~~~~~~~LG~~~~v~---v~~~~~~~i~ 252 (431)
+++|..|+ +++|+ +.++.+|+|||++|||+++++..++.+ +++++++||+|+.|+ +++++|+|++
T Consensus 307 l~~L~~~~------I~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~ 375 (559)
T 3p9d_A 307 LKEFVEAK------IMGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIK 375 (559)
T ss_dssp THHHHHTT------CEEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEE
T ss_pred HHHHHHcC------CceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEE
Confidence 99999875 46775 667889999999999999998766665 889999999999998 5899999999
Q ss_pred CCCChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccH
Q 014070 253 GSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGV 331 (431)
Q Consensus 253 ~~~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa 331 (431)
||++ +++|||+|||+|+++++|+||++|||||++|+++++| +|||||+
T Consensus 376 g~~~-------------------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa 424 (559)
T 3p9d_A 376 GTSK-------------------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGC 424 (559)
T ss_dssp EESS-------------------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTT
T ss_pred cCCC-------------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccH
Confidence 9877 3689999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCC------------CeeEeC
Q 014070 332 ALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSS------------DLGYNP 394 (431)
Q Consensus 332 ~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~------------~~G~d~ 394 (431)
+|++++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++. ++|||+
T Consensus 425 ~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~ 504 (559)
T 3p9d_A 425 VEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDL 504 (559)
T ss_dssp HHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECT
T ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEEC
Confidence 999999999999877 999999999999999999999999999999999 999864 233 689999
Q ss_pred CCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 395 ARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 395 ~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
.+|++.||++.|||||+.||+++|++|+|+|++||||
T Consensus 505 ~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 541 (559)
T 3p9d_A 505 IRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRI 541 (559)
T ss_dssp TSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred CCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999999986
No 10
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.6e-80 Score=651.06 Aligned_cols=374 Identities=16% Similarity=0.175 Sum_probs=342.2
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-++.+|..|||+|+|++++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++|++++.|
T Consensus 54 ~tIlk~i~v~hP~akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 133 (518)
T 3iyg_D 54 ATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRP 133 (518)
T ss_pred HHHHHHcccchHHHHHHHHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheee
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC--CHHHHHHHHhhccCCc------hhHHHHHHHHHHhhcc---CCc-----eeE------------------E-----
Q 014070 91 IT--TFEEIAQVGTTAANGD------GEIGELIAKVFEKGWE---NDL-----ITI------------------F----- 131 (431)
Q Consensus 91 v~--~~~~l~~vA~~s~~~~------~~la~li~~A~~~vg~---~~~-----i~i------------------f----- 131 (431)
++ +.++|.++|++|++++ ++|++++++|+.++++ +|. |+| |
T Consensus 134 v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~ 213 (518)
T 3iyg_D 134 VELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVA 213 (518)
T ss_pred CCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEecccc
Confidence 87 6789999999999864 7899999999999985 554 443 2
Q ss_pred -----EEeCcEEEEecccc-------------CCHH-----------HHHHHHHHHHhcCCcEEEE-----ecCcchhHH
Q 014070 132 -----VLDGALVLIYDTKI-------------SNSN-----------VIRQASLPCMMQGQSLLVV-----AEDVENEVL 177 (431)
Q Consensus 132 -----~l~np~Ill~d~~i-------------~~~~-----------~~~~~le~i~~~~~~lvii-----~~~i~~~al 177 (431)
.++||+|+++++++ ++++ ++.+.++++.+.|+|+||+ +++|+++++
T Consensus 214 ~~mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al 293 (518)
T 3iyg_D 214 NSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLAL 293 (518)
T ss_pred cCCCccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHH
Confidence 57899999998754 4554 3577889999999999999 799999999
Q ss_pred HHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ec-ceEEEEcC
Q 014070 178 GDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TM-DNVVIIGG 253 (431)
Q Consensus 178 ~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~-~~~~~i~~ 253 (431)
++|..| +|++||+|+++ +|+|||++|||+++++ ++++++++||+|+.|++ ++ +++++|++
T Consensus 294 ~~L~~~------~I~av~~~~~~-----~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g 357 (518)
T 3iyg_D 294 HFLNKM------KIMVVKDIERE-----DIEFICKTIGTKPVAH-----VDQFTADMLGSAELAEEVSLNGSGKLIKITG 357 (518)
T ss_pred HHHHHc------CcEEEecCCHH-----HHHHHHHHhCCEEecc-----cccCCHHHCCcCcEEEEEEeCCCceEEEEEC
Confidence 999875 57899998654 5999999999999997 89999999999999986 34 67899999
Q ss_pred CCChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHH
Q 014070 254 SGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVA 332 (431)
Q Consensus 254 ~~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~ 332 (431)
|++ ++++|||+|||+|+++++|+||++|||||++|+++++| +|||||++
T Consensus 358 ~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~ 407 (518)
T 3iyg_D 358 CAS------------------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAP 407 (518)
T ss_pred CCC------------------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHH
Confidence 865 24789999999999999999999999999999999998 99999999
Q ss_pred HHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCc
Q 014070 333 LLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGD 407 (431)
Q Consensus 333 el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI 407 (431)
|++++.+|++|+.+ ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.||
T Consensus 408 e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI 487 (518)
T 3iyg_D 408 EIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELV 487 (518)
T ss_pred HHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccC
Confidence 99999999999877 999999999999999999999999999999999 999873 4567999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHhcC
Q 014070 408 VDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 408 ~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
|||+.||+++|++|+|+|++||+|
T Consensus 488 ~dp~~vk~~al~~A~e~a~~iL~i 511 (518)
T 3iyg_D 488 VQPLLVSVSALTLATETVRSILKI 511 (518)
T ss_pred EEcHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999997
No 11
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.7e-80 Score=651.80 Aligned_cols=373 Identities=18% Similarity=0.238 Sum_probs=315.2
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.++.++..|||+|+|++++|++||+++||||||+|+||++||+++++++. |+||+.|++||++|++.++++|++++.|
T Consensus 16 ~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 95 (500)
T 3aq1_B 16 ATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREILETITIA 95 (500)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 467889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC--CHHHHHHHHhhcc------CCchhHHHHHHHHHHhhccC--Cc--------eeE------------------E---
Q 014070 91 IT--TFEEIAQVGTTAA------NGDGEIGELIAKVFEKGWEN--DL--------ITI------------------F--- 131 (431)
Q Consensus 91 v~--~~~~l~~vA~~s~------~~~~~la~li~~A~~~vg~~--~~--------i~i------------------f--- 131 (431)
++ +.++|.++|++|. ++++.|++++++|+.+++++ |. |+| |
T Consensus 96 v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds~lv~G~v~dk~ 175 (500)
T 3aq1_B 96 ISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKE 175 (500)
T ss_dssp CCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGCEEESEEEESCC
T ss_pred CCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCccceEEEeeeEEeec
Confidence 86 4789999998663 45789999999999999876 43 333 2
Q ss_pred --------EEeCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCcEEEEecCcchhHHHH
Q 014070 132 --------VLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGD 179 (431)
Q Consensus 132 --------~l~np~Ill~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvii~~~i~~~al~~ 179 (431)
+++||+|+++|++ |++++++ .+.++++.++|+|+||++++|+++++++
T Consensus 176 ~~~~~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~ 255 (500)
T 3aq1_B 176 RSHPNMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYY 255 (500)
T ss_dssp CSSTTSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCSEEEESSCBCHHHHHH
T ss_pred CCCCCCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHH
Confidence 8899999999997 7777775 8889999999999999999999999999
Q ss_pred HHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEe---cceEEEEcCCCC
Q 014070 180 IATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGE 256 (431)
Q Consensus 180 l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~---~~~~~~i~~~~~ 256 (431)
|..|+ |++|+ +.++++|+|||++|||+++++ ++++++++||+|+.|++. +++|+|++||++
T Consensus 256 L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~ 319 (500)
T 3aq1_B 256 IEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQD-----LDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQN 319 (500)
T ss_dssp HHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSC-----TTCCCSTTCEEEEEEEEEECSSSEEEEEEEETT
T ss_pred HHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEecc-----cccCCHhHCCCceEEEEEEecCeEEEEEECCCC
Confidence 99764 67876 678899999999999999986 899999999999999875 899999999877
Q ss_pred hhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHH
Q 014070 257 LVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLY 335 (431)
Q Consensus 257 ~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~ 335 (431)
+ ++|||+|||+|+++++|+||++|||||++|+++++| +|||||++|++
T Consensus 320 ~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~ 368 (500)
T 3aq1_B 320 S-------------------------------KAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVE 368 (500)
T ss_dssp C-------------------------------CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHH
T ss_pred C-------------------------------ceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHH
Confidence 3 689999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccc
Q 014070 336 ASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDP 410 (431)
Q Consensus 336 ~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP 410 (431)
++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||
T Consensus 369 ~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp 448 (500)
T 3aq1_B 369 LSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEP 448 (500)
T ss_dssp HHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEE
T ss_pred HHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCC
Confidence 99999999876 999999999999999999999999999999999 999863 3458999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHhcC
Q 014070 411 LKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 411 ~~vk~~ai~~A~~~a~~iL~i 431 (431)
+.||+++|++|+|+|++||+|
T Consensus 449 ~~vk~~al~~A~e~a~~iL~i 469 (500)
T 3aq1_B 449 LRIKTQAINAAMEATVMILRI 469 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997
No 12
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=7.7e-80 Score=652.96 Aligned_cols=373 Identities=18% Similarity=0.261 Sum_probs=346.6
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.++.++..|||+|+|++++|++||+++||||||+|+||++||+++++++. |+||+.|++||++|++.++++|++++.|
T Consensus 66 ~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 145 (548)
T 1q3q_A 66 ATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIR 145 (548)
T ss_dssp HHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 568899999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCC--HHHHHHHHhhcc------CCchhHHHHHHHHHHhhccC--C-------ceeE------------------E----
Q 014070 91 ITT--FEEIAQVGTTAA------NGDGEIGELIAKVFEKGWEN--D-------LITI------------------F---- 131 (431)
Q Consensus 91 v~~--~~~l~~vA~~s~------~~~~~la~li~~A~~~vg~~--~-------~i~i------------------f---- 131 (431)
++. .++|.++|++|. +++++|++++++|+.+++++ | .|+| |
T Consensus 146 v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~ 225 (548)
T 1q3q_A 146 VDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEV 225 (548)
T ss_dssp CCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCC
T ss_pred CCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccC
Confidence 874 789999998664 34689999999999999865 4 4555 2
Q ss_pred -------EEeCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCcEEEEecCcchhHHHHH
Q 014070 132 -------VLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDI 180 (431)
Q Consensus 132 -------~l~np~Ill~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvii~~~i~~~al~~l 180 (431)
+++||+|+++|++ |++++++ .+.++++.+.|+|+||++++|+++++++|
T Consensus 226 ~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L 305 (548)
T 1q3q_A 226 VHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYL 305 (548)
T ss_dssp SSTTSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHH
T ss_pred CCCCCcceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHH
Confidence 8999999999998 8888886 77889999999999999999999999999
Q ss_pred HHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEe---cceEEEEcCCCCh
Q 014070 181 ATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGEL 257 (431)
Q Consensus 181 ~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~---~~~~~~i~~~~~~ 257 (431)
..|+ |++|+ +.++++|+|||++|||+++++ ++++++++||+|+.|++. +++|+|++||+++
T Consensus 306 ~~~~------I~av~-----~~~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~ 369 (548)
T 1q3q_A 306 AKYG------IMAVR-----RVKKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNP 369 (548)
T ss_dssp HHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEEEETTEEEEEEECCSSC
T ss_pred HHCC------cEEEc-----cCCHHHHHHHHHHhCCeEecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCCC
Confidence 9864 67876 678899999999999999986 899999999999999874 8899999999873
Q ss_pred hhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHH
Q 014070 258 VDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYA 336 (431)
Q Consensus 258 ~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~ 336 (431)
++|||+|||+|+++++|+||++|||||++|+++++| +|||||++|+++
T Consensus 370 -------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~ 418 (548)
T 1q3q_A 370 -------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIEL 418 (548)
T ss_dssp -------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHH
T ss_pred -------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHH
Confidence 679999999999999999999999999999999999 999999999999
Q ss_pred HHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCccccc
Q 014070 337 SKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPL 411 (431)
Q Consensus 337 s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~ 411 (431)
+.+|++|+.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+
T Consensus 419 ~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~ 498 (548)
T 1q3q_A 419 AIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPL 498 (548)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEH
T ss_pred HHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecH
Confidence 9999999876 999999999999999999999999999999999 999863 34679999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHhcC
Q 014070 412 KHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 412 ~vk~~ai~~A~~~a~~iL~i 431 (431)
.||+++|++|+|+|++||+|
T Consensus 499 ~vk~~al~~A~e~a~~iL~i 518 (548)
T 1q3q_A 499 RVKKQAIKSASEAAIMILRI 518 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999997
No 13
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-79 Score=646.50 Aligned_cols=373 Identities=14% Similarity=0.143 Sum_probs=338.6
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-++.+|..|||+|+|++++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++|++++.|
T Consensus 54 ~tIlk~i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~ 133 (515)
T 3iyg_H 54 ATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVT 133 (515)
T ss_pred HHHHHHccCCCHHHHHHHHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 457888999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC--C----HHHHHHHHhhccC------CchhHHHHHHHHHHhhccC---CceeE-------------------------
Q 014070 91 IT--T----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITI------------------------- 130 (431)
Q Consensus 91 v~--~----~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~~---~~i~i------------------------- 130 (431)
++ + .+.|.++|++|.+ ++++|++++++|+.+++++ +.|+|
T Consensus 134 v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~ 213 (515)
T 3iyg_H 134 VKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSY 213 (515)
T ss_pred cccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccceEEEeeeEEecCccC
Confidence 84 5 4667999987663 4679999999999999866 56655
Q ss_pred --E-----EEeCcEEEEecc-------------ccCCHHHH-----------HHHHHHHHhcCCcEEEEecCcchhHHHH
Q 014070 131 --F-----VLDGALVLIYDT-------------KISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGD 179 (431)
Q Consensus 131 --f-----~l~np~Ill~d~-------------~i~~~~~~-----------~~~le~i~~~~~~lvii~~~i~~~al~~ 179 (431)
| +++||+|+++|+ +|++++++ .+.++++.+.|+|+||++++|++.++++
T Consensus 214 p~~~~~p~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~ 293 (515)
T 3iyg_H 214 AGFEMQPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQY 293 (515)
T ss_pred cccccCCccccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHH
Confidence 1 578999999998 47888776 5568899999999999999999988887
Q ss_pred HHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEe---cceEEEEcCCCC
Q 014070 180 IATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGE 256 (431)
Q Consensus 180 l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~---~~~~~~i~~~~~ 256 (431)
|.. +| ++++ ++.++.+|+|||++|||+++++ ++++++++||+|+.|++. +++++||+||++
T Consensus 294 l~~---~g---I~~v-----~~~~k~~leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~ 357 (515)
T 3iyg_H 294 FAD---RD---MFCA-----GRVPEEDLKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIGGERYNFFTGCPK 357 (515)
T ss_pred HHH---cC---Cccc-----ccccHHHHHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEcCeEEEEEecCCC
Confidence 753 33 3454 4678889999999999999997 899999999999999864 789999999987
Q ss_pred hhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHc-CCCCCccHHHHH
Q 014070 257 LVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLY 335 (431)
Q Consensus 257 ~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~el~ 335 (431)
+ +.|||++||+|+++++|+||++|||||++|+++++ ++|||||++|++
T Consensus 358 ~-------------------------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~ 406 (515)
T 3iyg_H 358 A-------------------------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEME 406 (515)
T ss_pred C-------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHH
Confidence 4 56999999999999999999999999999999998 599999999999
Q ss_pred HHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccc
Q 014070 336 ASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDP 410 (431)
Q Consensus 336 ~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP 410 (431)
++.+|++|+.. ++++|+|+++|++||+.|||+||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||
T Consensus 407 ~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp 486 (515)
T 3iyg_H 407 LSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEP 486 (515)
T ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEEC
Confidence 99999999877 999999999999999999999999999999999 999874 3457899999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHhcC
Q 014070 411 LKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 411 ~~vk~~ai~~A~~~a~~iL~i 431 (431)
+.||+++|++|+|+|+|||+|
T Consensus 487 ~~vk~~al~~A~~~a~~iL~i 507 (515)
T 3iyg_H 487 AMVRINALTAASEAACLIVSV 507 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999986
No 14
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=8.6e-80 Score=652.22 Aligned_cols=372 Identities=20% Similarity=0.250 Sum_probs=345.7
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.++.++..|||+|+|++++|++||+++||||||+|+||++||+++++++. |+||+.|++||++|++.++++|++++.|
T Consensus 65 ~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 144 (545)
T 1a6d_A 65 ATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK 144 (545)
T ss_dssp HHHHHHSCCCSHHHHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHhhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 568899999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC-CHHHHHHHHhhcc------CCchhHHHHHHHHHHhhccC---------CceeE------------------E-----
Q 014070 91 IT-TFEEIAQVGTTAA------NGDGEIGELIAKVFEKGWEN---------DLITI------------------F----- 131 (431)
Q Consensus 91 v~-~~~~l~~vA~~s~------~~~~~la~li~~A~~~vg~~---------~~i~i------------------f----- 131 (431)
+ +.++|.++|++|. +++++|++++++|+.+++++ +.|+| |
T Consensus 145 -~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~ 223 (545)
T 1a6d_A 145 -STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKV 223 (545)
T ss_dssp -CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCS
T ss_pred -CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCC
Confidence 7 7889999998664 45789999999999999865 25555 2
Q ss_pred ------EEeCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCcEEEEecCcchhHHHHHH
Q 014070 132 ------VLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIA 181 (431)
Q Consensus 132 ------~l~np~Ill~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvii~~~i~~~al~~l~ 181 (431)
+++||+|+++|++ |++++++ .+.++++.++|+|+||++++|+++++++|.
T Consensus 224 ~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~ 303 (545)
T 1a6d_A 224 HSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLA 303 (545)
T ss_dssp CTTSCSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHH
T ss_pred CCCCcceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHH
Confidence 8899999999997 7778776 788899999999999999999999999999
Q ss_pred HhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEEe---cceEEEEcCCCChh
Q 014070 182 TDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELV 258 (431)
Q Consensus 182 ~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~---~~~~~~i~~~~~~~ 258 (431)
.|+ |++|+ +.++++|+|||++|||+++++ ++++++++||+|+.|++. +++|+|++||+++
T Consensus 304 ~~~------I~av~-----~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~- 366 (545)
T 1a6d_A 304 KEG------IYAVR-----RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNP- 366 (545)
T ss_dssp HHT------CEEEC-----SCCHHHHHHHHHHHCCCEESS-----GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCS-
T ss_pred HCC------eeEec-----cCCHHHHHHHHHHhCCeeecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCCC-
Confidence 874 67876 678899999999999999986 899999999999999874 7899999998773
Q ss_pred hHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHH
Q 014070 259 DIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYAS 337 (431)
Q Consensus 259 ~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s 337 (431)
++|||+|||+|+++++|+||++|||||++|+++++| +|||||++|++++
T Consensus 367 ------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~ 416 (545)
T 1a6d_A 367 ------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELA 416 (545)
T ss_dssp ------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHH
T ss_pred ------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHH
Confidence 689999999999999999999999999999999999 9999999999999
Q ss_pred HHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccccc
Q 014070 338 KELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLK 412 (431)
Q Consensus 338 ~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~ 412 (431)
.+|++|+.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.
T Consensus 417 ~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 496 (545)
T 1a6d_A 417 MRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLR 496 (545)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHH
T ss_pred HHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHH
Confidence 999999876 999999999999999999999999999999999 999863 346899999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhcC
Q 014070 413 HVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 413 vk~~ai~~A~~~a~~iL~i 431 (431)
||+++|++|+++|++||+|
T Consensus 497 vk~~al~~A~e~a~~iL~i 515 (545)
T 1a6d_A 497 VKTHALESAVEVATMILRI 515 (545)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997
No 15
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-79 Score=648.43 Aligned_cols=378 Identities=15% Similarity=0.171 Sum_probs=341.3
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhh-hcc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDC-QAR 89 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~-~s~ 89 (431)
+.++.+|..|||+|+|++++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++|++ ++.
T Consensus 53 ~tIlk~i~v~hP~akll~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~ 132 (529)
T 3iyg_A 53 ATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLII 132 (529)
T ss_pred HHHHHHcccCChHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 467889999999999999999999999999999999999999999999999 999999999999999999999999 999
Q ss_pred cCC--CHHHHHHHHhhccC------CchhHHHHHHHHHHhhc---cCC-----c--eeE------------------E--
Q 014070 90 KIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGW---END-----L--ITI------------------F-- 131 (431)
Q Consensus 90 ~v~--~~~~l~~vA~~s~~------~~~~la~li~~A~~~vg---~~~-----~--i~i------------------f-- 131 (431)
|++ +.++|.++|++|.+ ++++|++++++|+.+++ ++| . |+| |
T Consensus 133 ~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk 212 (529)
T 3iyg_A 133 NTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNC 212 (529)
T ss_pred CCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEec
Confidence 987 67899999998864 46899999999999997 344 2 444 2
Q ss_pred ---------EEeCcEEEEecccc-------------CCHHH-----------HHHHHHHHHhcCCcEEEEecCcchhHHH
Q 014070 132 ---------VLDGALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLG 178 (431)
Q Consensus 132 ---------~l~np~Ill~d~~i-------------~~~~~-----------~~~~le~i~~~~~~lvii~~~i~~~al~ 178 (431)
.++||+|+++|+++ +++++ +.+.++++.+.|+|+||++++|++++++
T Consensus 213 ~~~~~~m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~ 292 (529)
T 3iyg_A 213 VVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLK 292 (529)
T ss_pred CcccccCCcccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHH
Confidence 77899999999853 44433 4567788999999999999999999999
Q ss_pred HHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCC-ccCCCCCCceeccEEE---EecceEEEEcCC
Q 014070 179 DIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMN-STYFVPLKLGSCKRVI---ATMDNVVIIGGS 254 (431)
Q Consensus 179 ~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~-l~~~~~~~LG~~~~v~---v~~~~~~~i~~~ 254 (431)
+|..|+ |++|+ +.++++|+|||++|||+++++..+++ .+++++++||+|+.|+ +++++++|++||
T Consensus 293 ~L~~~g------I~av~-----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~ 361 (529)
T 3iyg_A 293 YFVEAG------AMAVR-----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNT 361 (529)
T ss_pred HHHHcC------Cceec-----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcC
Confidence 999773 67887 56788999999999999999854444 2456788999999998 789999999999
Q ss_pred CChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHH
Q 014070 255 GELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVAL 333 (431)
Q Consensus 255 ~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~e 333 (431)
+++ ++|||+|||+|+++++|.||++|||||++|+++++| +|||||++|
T Consensus 362 ~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E 410 (529)
T 3iyg_A 362 KAR-------------------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVE 410 (529)
T ss_pred CCC-------------------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHH
Confidence 874 579999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC--------CCeeEeCCCCccc
Q 014070 334 LYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS--------SDLGYNPARGNYV 400 (431)
Q Consensus 334 l~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~--------~~~G~d~~~g~~~ 400 (431)
+++|.+|++|+.+ +|++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++ .++|||+.+|++.
T Consensus 411 ~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~ 490 (529)
T 3iyg_A 411 AALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPR 490 (529)
T ss_pred HHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCcc
Confidence 9999999999887 999999999999999999999999999999999 999863 22 5789999999999
Q ss_pred cccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 401 DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 401 d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||++.|||||+.||+++|++|+|+|++||||
T Consensus 491 d~~~~gV~dp~~vk~~al~~A~e~a~~iL~i 521 (529)
T 3iyg_A 491 DNKQAGVFEPTIVKVKSLKFATEAAITILRI 521 (529)
T ss_pred ChhhccCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999997
No 16
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.2e-79 Score=651.17 Aligned_cols=373 Identities=19% Similarity=0.255 Sum_probs=345.6
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.++.++..|||+|+|++++|++||+++||||||+|+||++||+++++++. |+||+.|++||++|++.++++|++++.|
T Consensus 64 ~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~ 143 (543)
T 1a6d_B 64 VTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTK 143 (543)
T ss_dssp HHHHHHSCCCSHHHHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 568899999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCC--HHHHHHHHhhcc------CCchhHHHHHHHHHHhhccC--Cc-------eeE------------------E----
Q 014070 91 ITT--FEEIAQVGTTAA------NGDGEIGELIAKVFEKGWEN--DL-------ITI------------------F---- 131 (431)
Q Consensus 91 v~~--~~~l~~vA~~s~------~~~~~la~li~~A~~~vg~~--~~-------i~i------------------f---- 131 (431)
++. .++|.++|++|. ++++.|++++++|+.+++++ |. |+| |
T Consensus 144 v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~ 223 (543)
T 1a6d_B 144 IGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEK 223 (543)
T ss_dssp CCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCC
T ss_pred CCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCC
Confidence 874 688999998654 35688999999999999876 53 544 2
Q ss_pred -------EEeCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCcEEEEecCcchhHHHHH
Q 014070 132 -------VLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDI 180 (431)
Q Consensus 132 -------~l~np~Ill~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvii~~~i~~~al~~l 180 (431)
+++||+|+++|++ |++++++ .+.++++.+.|+|+||++++|+++++++|
T Consensus 224 ~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L 303 (543)
T 1a6d_B 224 VHPGMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYL 303 (543)
T ss_dssp SSTTSCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHH
T ss_pred CCCCCcceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHH
Confidence 8999999999997 7888776 78889999999999999999999999999
Q ss_pred HHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ecceEEEEcCCCCh
Q 014070 181 ATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGEL 257 (431)
Q Consensus 181 ~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~~~~~~i~~~~~~ 257 (431)
..|+ |++|+ +.++++|+|||++|||+++++ ++++++++||+|+.|++ ++++++|++||+++
T Consensus 304 ~~~~------I~av~-----~v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~ 367 (543)
T 1a6d_B 304 SRAG------IYAVR-----RVKKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNP 367 (543)
T ss_dssp HHTT------CEEEC-----SCCHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSS
T ss_pred HHCC------eeEec-----cCCHHHHHHHHHHhCCceecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCCC
Confidence 9763 67876 677889999999999999986 89999999999999987 48899999998774
Q ss_pred hhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHH
Q 014070 258 VDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYA 336 (431)
Q Consensus 258 ~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~ 336 (431)
++|||+|||+|+++++|+||++|||||++|+++++| +|||||++|+++
T Consensus 368 -------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~ 416 (543)
T 1a6d_B 368 -------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEI 416 (543)
T ss_dssp -------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHH
T ss_pred -------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHH
Confidence 679999999999999999999999999999999999 999999999999
Q ss_pred HHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCccccc
Q 014070 337 SKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPL 411 (431)
Q Consensus 337 s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~ 411 (431)
+.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+
T Consensus 417 s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~ 496 (543)
T 1a6d_B 417 AFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPI 496 (543)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEH
T ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecH
Confidence 9999999876 899999999999999999999999999999999 999863 44689999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHhcC
Q 014070 412 KHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 412 ~vk~~ai~~A~~~a~~iL~i 431 (431)
.||+++|++|+++|++||+|
T Consensus 497 ~vk~~al~~A~e~a~~iL~i 516 (543)
T 1a6d_B 497 RVGKQAIESATEAAIMILRI 516 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986
No 17
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.1e-79 Score=642.57 Aligned_cols=374 Identities=15% Similarity=0.199 Sum_probs=340.0
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhh---
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQ--- 87 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~--- 87 (431)
+-++.+|..|||+|+|++++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++|+++
T Consensus 54 ~tIlk~i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~ 133 (512)
T 3iyg_Q 54 ATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCC 133 (512)
T ss_pred HHHHHHcccCCHHHHHHHHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999998
Q ss_pred -cccCCCHHHHHHHHhhccCC-----chhHHHHHHHHHHhhccC-CceeE-----------------------E------
Q 014070 88 -ARKITTFEEIAQVGTTAANG-----DGEIGELIAKVFEKGWEN-DLITI-----------------------F------ 131 (431)
Q Consensus 88 -s~~v~~~~~l~~vA~~s~~~-----~~~la~li~~A~~~vg~~-~~i~i-----------------------f------ 131 (431)
+.++++.++|.++|++|+++ ++++++++++|+.+++++ +.+++ |
T Consensus 134 ~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~ 213 (512)
T 3iyg_Q 134 SAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG 213 (512)
T ss_pred cCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC
Confidence 56677889999999999876 688999999999999876 44432 2
Q ss_pred ---EEeCcEEEEeccc-------------cCCHHHHHHH-------HH----HHHhcCCcEEEEecCcchhHHHHHHHhc
Q 014070 132 ---VLDGALVLIYDTK-------------ISNSNVIRQA-------SL----PCMMQGQSLLVVAEDVENEVLGDIATDF 184 (431)
Q Consensus 132 ---~l~np~Ill~d~~-------------i~~~~~~~~~-------le----~i~~~~~~lvii~~~i~~~al~~l~~n~ 184 (431)
.++||+|++++++ |++++++.++ |+ ++.++|+|+||++++|++.++++|..
T Consensus 214 ~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k-- 291 (512)
T 3iyg_Q 214 DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANK-- 291 (512)
T ss_pred CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHH--
Confidence 5678999998763 6778888876 55 78899999999999999999987753
Q ss_pred cCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ecceEEEEcCCCChhhHH
Q 014070 185 TCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGELVDIQ 261 (431)
Q Consensus 185 ~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~~~~~~i~~~~~~~~i~ 261 (431)
.+|++||+|+++ +|+|||++|||+++++ ++++++++||+|++|++ ++++++++++|+.
T Consensus 292 ----~~I~av~~~~~~-----dle~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~----- 352 (512)
T 3iyg_Q 292 ----YNIMLVRLNSKW-----DLRRLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE----- 352 (512)
T ss_pred ----CCeEEEEeCCHH-----HHHHHHHHhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEEEcccC-----
Confidence 468999988754 4999999999999996 89999999999999986 4568999998753
Q ss_pred HHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHHHH
Q 014070 262 ERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKEL 340 (431)
Q Consensus 262 ~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~~L 340 (431)
+|++|||+|||+|+++++|+||++|||||++|+++++| +|||||++|++++.+|
T Consensus 353 -------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L 407 (512)
T 3iyg_Q 353 -------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQI 407 (512)
T ss_pred -------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHH
Confidence 25789999999999999999999999999999999999 9999999999999999
Q ss_pred HhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC--ccccccccCccccccc
Q 014070 341 DKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG--NYVDMFKCGDVDPLKH 413 (431)
Q Consensus 341 ~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g--~~~d~~~~gI~DP~~v 413 (431)
++|+.+ ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+| ++.||++.|||||+.|
T Consensus 408 ~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~v 487 (512)
T 3iyg_Q 408 TSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLG 487 (512)
T ss_pred HHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHH
Confidence 999877 999999999999999999999999999999999 999873 567899999965 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 014070 414 VPSEFAKATSMISLKNAI 431 (431)
Q Consensus 414 k~~ai~~A~~~a~~iL~i 431 (431)
|+++|++|+|+|+|||+|
T Consensus 488 k~~al~~A~~~a~~iL~i 505 (512)
T 3iyg_Q 488 KYWAIKLATNAAVTVLRV 505 (512)
T ss_pred HHHHHHHHHHHHHHHHhH
Confidence 999999999999999986
No 18
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=3.8e-80 Score=652.68 Aligned_cols=376 Identities=15% Similarity=0.146 Sum_probs=342.5
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.++.+|..|||+++|++++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.++++|++++.|
T Consensus 62 ~tIlk~i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 141 (528)
T 3p9d_D 62 HTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHK 141 (528)
T ss_dssp HHHHHHSCCCCTTHHHHHHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHcccCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 567889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC--CHHHHHHHHhhccCC------chhHHHHHHHHHHhhcc--CCceeE-----------------------E------
Q 014070 91 IT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWE--NDLITI-----------------------F------ 131 (431)
Q Consensus 91 v~--~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~--~~~i~i-----------------------f------ 131 (431)
++ +.++|.++|++|+++ +++|++++++|+.++++ +|.+++ |
T Consensus 142 v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~ 221 (528)
T 3p9d_D 142 VSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIK 221 (528)
T ss_dssp CCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCC
T ss_pred CCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccC
Confidence 87 788999999999875 58999999999999986 344332 1
Q ss_pred ------EEeCcEEEEeccccC-------------CHHH-----------HHHHHHHHHhcCCcEEEEecCc-----chhH
Q 014070 132 ------VLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMMQGQSLLVVAEDV-----ENEV 176 (431)
Q Consensus 132 ------~l~np~Ill~d~~i~-------------~~~~-----------~~~~le~i~~~~~~lvii~~~i-----~~~a 176 (431)
+++||+|+++|++++ ++++ +.+.++++.+.|+|+||++++| ++++
T Consensus 222 ~~~m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~a 301 (528)
T 3p9d_D 222 SAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLA 301 (528)
T ss_dssp SSSCCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHH
T ss_pred cccCcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHH
Confidence 789999999999765 4543 6788999999999999999999 9999
Q ss_pred HHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ecceEEEEcC
Q 014070 177 LGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGG 253 (431)
Q Consensus 177 l~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~~~~~~i~~ 253 (431)
+++|..| +|++||. .++.+|+|||++|||+++++ ++++++++||+|+.|++ ++++++++++
T Consensus 302 l~~L~~~------~I~av~~-----~~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g 365 (528)
T 3p9d_D 302 LHFLSKL------NIMVVKD-----IEREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVEEIDSDGSKIVRVTG 365 (528)
T ss_dssp HHHHTTT------SCCEEEC-----CCTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEECCEETTEECCBCTT
T ss_pred HHHHHHc------CcEEEEe-----CCHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEEEEEECCEEEEEEEc
Confidence 9998865 3678884 56778999999999999997 78999999999999975 5678899998
Q ss_pred CCChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHH
Q 014070 254 SGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVA 332 (431)
Q Consensus 254 ~~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~ 332 (431)
|.+.. .+++|||+|||+|+++++|+||++|||||++|+++++| +|||||++
T Consensus 366 ~~~~~----------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~ 417 (528)
T 3p9d_D 366 IRNNN----------------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAP 417 (528)
T ss_dssp BCCGG----------------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHH
T ss_pred ccccC----------------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHH
Confidence 86310 14789999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCc
Q 014070 333 LLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGD 407 (431)
Q Consensus 333 el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI 407 (431)
|++++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.||
T Consensus 418 e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI 497 (528)
T 3p9d_D 418 EIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHI 497 (528)
T ss_dssp HHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCC
T ss_pred HHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccC
Confidence 99999999999877 999999999999999999999999999999999 999874 4567999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHhcC
Q 014070 408 VDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 408 ~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
|||+.||+++|++|+|+|++||+|
T Consensus 498 ~dp~~vk~~al~~A~e~a~~iL~i 521 (528)
T 3p9d_D 498 LQPVLVSTSAITLASECVKSILRI 521 (528)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred eecHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999987
No 19
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2e-78 Score=638.48 Aligned_cols=373 Identities=17% Similarity=0.188 Sum_probs=337.7
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-++.+|..|||+|+|++++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++|++++.|
T Consensus 53 ~tIlk~i~~~hP~Akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 132 (515)
T 3iyg_E 53 ATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDS 132 (515)
T ss_pred HHHHHHcccCCHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcee
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred CCC----HHHHHHHHhhccCC------chhHHHHHHHHHHhhccC-------CceeE------------------E----
Q 014070 91 ITT----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITI------------------F---- 131 (431)
Q Consensus 91 v~~----~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~-------~~i~i------------------f---- 131 (431)
++. .++|.++|++|+++ .+.|++++++|+.++.+. +.|+| |
T Consensus 133 v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~ 212 (515)
T 3iyg_E 133 VLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDF 212 (515)
T ss_pred cCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEeccc
Confidence 853 58899999999874 357889999999888642 12222 2
Q ss_pred -------EEeCcEEEEeccc-------------cCCHHHH-----------HHHHHHHHhcCCcEEEEecCcchhHHHHH
Q 014070 132 -------VLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDI 180 (431)
Q Consensus 132 -------~l~np~Ill~d~~-------------i~~~~~~-----------~~~le~i~~~~~~lvii~~~i~~~al~~l 180 (431)
.++||+|++++++ |++++++ .+.++++.+.|+|+||++++|+++++++|
T Consensus 213 ~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L 292 (515)
T 3iyg_E 213 SHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLL 292 (515)
T ss_pred ccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHH
Confidence 5688999998763 6677776 56788999999999999999999999999
Q ss_pred HHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE-----ecceEEEEcCCC
Q 014070 181 ATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDNVVIIGGSG 255 (431)
Q Consensus 181 ~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v-----~~~~~~~i~~~~ 255 (431)
..|++ .+++.+ ++.+|+|||++|||+++++ ++++++++||+|+.|++ ++++++|++||+
T Consensus 293 ~~~~I------~~v~~v-----~k~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~ 356 (515)
T 3iyg_E 293 LQNDL------PAVRWV-----GGPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCK 356 (515)
T ss_pred HHCCC------EEEecc-----CHHHHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEEEEeccccceEEEEEcCC
Confidence 98754 577754 4678999999999999996 89999999999999987 458999999998
Q ss_pred ChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHH
Q 014070 256 ELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALL 334 (431)
Q Consensus 256 ~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el 334 (431)
++ +.+||+|||+|+++++|+||++|||||++|+++++| +|||||++|+
T Consensus 357 ~~-------------------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~ 405 (515)
T 3iyg_E 357 NS-------------------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEI 405 (515)
T ss_pred CC-------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHH
Confidence 85 468999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccccccccCcc
Q 014070 335 YASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYVDMFKCGDV 408 (431)
Q Consensus 335 ~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~----~~~~~G~d~~~g~~~d~~~~gI~ 408 (431)
+++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.|||
T Consensus 406 ~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~ 485 (515)
T 3iyg_E 406 SCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVI 485 (515)
T ss_pred HHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCE
Confidence 999999999887 999999999999999999999999999999999 999863 34679999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHhcC
Q 014070 409 DPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 409 DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+.||+++|++|+|+|++||+|
T Consensus 486 dp~~vk~~al~~A~~~a~~iL~i 508 (515)
T 3iyg_E 486 ETLIGKKQQISLATQMVRMILKI 508 (515)
T ss_pred EcHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999986
No 20
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=6.6e-80 Score=651.37 Aligned_cols=373 Identities=19% Similarity=0.233 Sum_probs=341.9
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc--CCChHHHHHHHHHHHHHHHHHHhhhcc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG--RANLTGLTQGFRMAADAVVRNLDCQAR 89 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~--g~~P~~I~~G~~~a~~~~l~~L~~~s~ 89 (431)
+-++.++..|||+|+|++++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++|++++.
T Consensus 61 ~tIlk~i~~~hP~Akll~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~ 140 (527)
T 3p9d_B 61 ATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAV 140 (527)
T ss_dssp HHHHHTCCCCCHHHHHHHHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCB
T ss_pred HHHHHHhccCCHHHHHHHHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 457889999999999999999999999999999999999999999999997 999999999999999999999999999
Q ss_pred cCCC-----HHHHHHHHhhccCC------chhHHHHHHHHHHhhccCC---ceeE------------------E------
Q 014070 90 KITT-----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND---LITI------------------F------ 131 (431)
Q Consensus 90 ~v~~-----~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~~---~i~i------------------f------ 131 (431)
|+++ .++|.++|++|+++ +++|++++++|+.++++++ .|+| |
T Consensus 141 ~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~ 220 (527)
T 3p9d_B 141 DNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGN 220 (527)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSS
T ss_pred cCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCC
Confidence 9885 68899999999875 6789999999999999886 5555 2
Q ss_pred ----EEeCcEEEEeccc--------------cCCHHHH-----------HHHHHHHHhcCCcEEEEecCcchhHHHHHHH
Q 014070 132 ----VLDGALVLIYDTK--------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIAT 182 (431)
Q Consensus 132 ----~l~np~Ill~d~~--------------i~~~~~~-----------~~~le~i~~~~~~lvii~~~i~~~al~~l~~ 182 (431)
+++||+|++++++ |++++++ .+.++++.++|+|+||++++|+++++++|..
T Consensus 221 ~~p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~ 300 (527)
T 3p9d_B 221 NQPKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTD 300 (527)
T ss_dssp SCCSCCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHH
T ss_pred CCCeeeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHH
Confidence 5789999998864 4555555 5678889999999999999999999999997
Q ss_pred hccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEE---EecceEEEEcCCCChhh
Q 014070 183 DFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVD 259 (431)
Q Consensus 183 n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~---v~~~~~~~i~~~~~~~~ 259 (431)
|+ +++|++|+++ +|+|+|++|||+++++ ++++++++||+|+.|+ +++++++++.||++
T Consensus 301 ~~------i~av~~~~~~-----dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~--- 361 (527)
T 3p9d_B 301 LG------INSIEHADFE-----GVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA--- 361 (527)
T ss_dssp TC------BCCCCCCHHH-----HHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC---
T ss_pred CC------CEEEecCCHH-----HHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEecceEEEEEECCCC---
Confidence 64 5788877544 5999999999999987 8999999999999998 57899999999876
Q ss_pred HHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHHHHH
Q 014070 260 IQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASK 338 (431)
Q Consensus 260 i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~~s~ 338 (431)
+++|||+|||+|+++++|+||++|||||++|+++++| +|||||++|++++.
T Consensus 362 ----------------------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~ 413 (527)
T 3p9d_B 362 ----------------------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSK 413 (527)
T ss_dssp ----------------------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHH
T ss_pred ----------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHH
Confidence 3789999999999999999999999999999999999 99999999999999
Q ss_pred HHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCccccccc
Q 014070 339 ELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKH 413 (431)
Q Consensus 339 ~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP~~v 413 (431)
+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.|||||+.|
T Consensus 414 ~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~v 493 (527)
T 3p9d_B 414 AVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKL 493 (527)
T ss_dssp HHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTH
T ss_pred HHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHH
Confidence 99999877 999999999999999999999999999999999 999874 4567999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 014070 414 VPSEFAKATSMISLKNAI 431 (431)
Q Consensus 414 k~~ai~~A~~~a~~iL~i 431 (431)
|+++|++|+|+|++||+|
T Consensus 494 k~~al~~A~e~a~~iL~i 511 (527)
T 3p9d_B 494 KRAVVSSASEAAEVLLRV 511 (527)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhH
Confidence 999999999999999986
No 21
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.8e-78 Score=634.12 Aligned_cols=373 Identities=13% Similarity=0.148 Sum_probs=336.6
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-++.+|..|||+|+|++++|++||+++||||||+|+||++||++|++++. |+||+.|++||++|++.++++|++++.|
T Consensus 52 ~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 131 (515)
T 3iyg_G 52 NAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIP 131 (515)
T ss_pred HHHHHhcccCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCC--HHHHHHHHhhccCC------chhHHHHHHHHHHhhccC--Cc--------eeE------------------E---
Q 014070 91 ITT--FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL--------ITI------------------F--- 131 (431)
Q Consensus 91 v~~--~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~--~~--------i~i------------------f--- 131 (431)
++. .+.|.++|++|.++ .+.+++++++|+.++..+ +. |.| |
T Consensus 132 v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~ 211 (515)
T 3iyg_G 132 VDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKD 211 (515)
T ss_pred cCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCC
Confidence 873 68899999988863 235678899999888621 21 222 2
Q ss_pred --------EEeCcEEEEecc-------------ccCCHHHHHHHHH-----------HHHhcCCcEEEEecCcchhHHHH
Q 014070 132 --------VLDGALVLIYDT-------------KISNSNVIRQASL-----------PCMMQGQSLLVVAEDVENEVLGD 179 (431)
Q Consensus 132 --------~l~np~Ill~d~-------------~i~~~~~~~~~le-----------~i~~~~~~lvii~~~i~~~al~~ 179 (431)
+++||+|+++|+ +|++++++.++++ ++.+.|.+++|+.++|++.++++
T Consensus 212 ~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~ 291 (515)
T 3iyg_G 212 VTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHY 291 (515)
T ss_pred CCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHH
Confidence 789999999998 6888999988887 88888888888888999999999
Q ss_pred HHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCcee-ccEEEE---ecceEEEEcCCC
Q 014070 180 IATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA---TMDNVVIIGGSG 255 (431)
Q Consensus 180 l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~-~~~v~v---~~~~~~~i~~~~ 255 (431)
|..+ +|+++ ++.++++|+|||++|||+++++ ++++++++||+ |+.|++ ++++++||+||+
T Consensus 292 L~~~------~I~av-----~~~~k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~ 355 (515)
T 3iyg_G 292 LMRA------NITAI-----RRVRKTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEIKKIGDEYFTFITECK 355 (515)
T ss_pred HHHC------Cceee-----ccCCHHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEEEEECCceEEEEeCCC
Confidence 8753 46676 4678899999999999999997 89999999999 999986 456899999998
Q ss_pred ChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHc-CCCCCccHHHH
Q 014070 256 ELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALL 334 (431)
Q Consensus 256 ~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~-gvVpGGGa~el 334 (431)
++ +.|||+|||+|+++++|.||++|||||++|+++++ ++|||||++|+
T Consensus 356 ~~-------------------------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~ 404 (515)
T 3iyg_G 356 DP-------------------------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEM 404 (515)
T ss_pred CC-------------------------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHH
Confidence 85 46999999999999999999999999999999975 69999999999
Q ss_pred HHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccccccccCcc
Q 014070 335 YASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYVDMFKCGDV 408 (431)
Q Consensus 335 ~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~----~~~~~G~d~~~g~~~d~~~~gI~ 408 (431)
+++.+|++|+.. +|++|+|+++|++||+.|||+||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||
T Consensus 405 ~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~ 484 (515)
T 3iyg_G 405 AVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIW 484 (515)
T ss_pred HHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCE
Confidence 999999999877 999999999999999999999999999999999 999864 24579999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHhcC
Q 014070 409 DPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 409 DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||+.||+++|++|+|+|++||+|
T Consensus 485 dp~~vk~~al~~A~e~a~~iL~i 507 (515)
T 3iyg_G 485 EPLAVKLQTYKTAVETAVLLLRI 507 (515)
T ss_pred EcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986
No 22
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=6.2e-78 Score=639.70 Aligned_cols=373 Identities=19% Similarity=0.208 Sum_probs=336.6
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-++.++..|||+|+|++++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++|++++.|
T Consensus 88 ~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 167 (562)
T 3p9d_E 88 ATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDD 167 (562)
T ss_dssp HHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSS
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred CCCH------HHHHHHHhhccCC------chhHHHHHHHHHHhhccC-------CceeE------------------E--
Q 014070 91 ITTF------EEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITI------------------F-- 131 (431)
Q Consensus 91 v~~~------~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~-------~~i~i------------------f-- 131 (431)
++.. ++|.++|++|+++ .+.|++++++|+.++.+. +.|+| |
T Consensus 168 v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk 247 (562)
T 3p9d_E 168 ISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDK 247 (562)
T ss_dssp SSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESS
T ss_pred cCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEec
Confidence 8632 6899999998874 357899999999988652 12322 2
Q ss_pred ---------EE------eCcEEEEeccc-------------cCCHHH-----------HHHHHHHHHhcCCcEEEEecCc
Q 014070 132 ---------VL------DGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLLVVAEDV 172 (431)
Q Consensus 132 ---------~l------~np~Ill~d~~-------------i~~~~~-----------~~~~le~i~~~~~~lvii~~~i 172 (431)
.+ +||+|++++++ |+++++ +.+.++++.+.|+|+||++++|
T Consensus 248 ~~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I 327 (562)
T 3p9d_E 248 DFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGF 327 (562)
T ss_dssp CCCTTSCCC-----TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSC
T ss_pred CCCCCCcCcccccccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 56 79999998863 566666 5688999999999999999999
Q ss_pred chhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE-----ecce
Q 014070 173 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDN 247 (431)
Q Consensus 173 ~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v-----~~~~ 247 (431)
+++++++|..|++ .+++.+ ++++|+|||++|||+++++ ++++++++||+|+.|++ ++++
T Consensus 328 ~~~Al~~L~~~~I------~~v~~v-----~k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~ 391 (562)
T 3p9d_E 328 DDEANHLLLQNDL------PAVRWV-----GGQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYEQEFGTTKDR 391 (562)
T ss_dssp CSHHHHHHHTTTC------CCEECC-----CTTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEEECCSSSSCC
T ss_pred CHHHHHHHHHCCC------EEEecc-----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEEEEeccCCce
Confidence 9999999998764 456655 4677999999999999996 89999999999999997 4689
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CC
Q 014070 248 VVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IV 326 (431)
Q Consensus 248 ~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vV 326 (431)
++||+||+++ +.|||+|||+|+++++|+||++|||||++|+++++| +|
T Consensus 392 ~~~i~g~~~~-------------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iV 440 (562)
T 3p9d_E 392 MLIIEQSKET-------------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVV 440 (562)
T ss_dssp EEEECCCSCC-------------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEE
T ss_pred EEEEecCCCC-------------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 9999999875 468999999999999999999999999999999999 99
Q ss_pred CCccHHHHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccc
Q 014070 327 PGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGNYV 400 (431)
Q Consensus 327 pGGGa~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~----~~~~~G~d~~~g~~~ 400 (431)
||||++|++++.+|++++.+ +|++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.
T Consensus 441 pGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~ 520 (562)
T 3p9d_E 441 YGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSN 520 (562)
T ss_dssp ETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCC
T ss_pred CCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCccc
Confidence 99999999999999999877 999999999999999999999999999999999 999863 456899999999999
Q ss_pred cccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 401 DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 401 d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
||++.|||||+.||+++|++|+|+|++||+|
T Consensus 521 dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 551 (562)
T 3p9d_E 521 DMKELFVVDPFIGKKQQILLATQLCRMILKI 551 (562)
T ss_dssp BTTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred chHhccCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-77 Score=631.53 Aligned_cols=372 Identities=17% Similarity=0.209 Sum_probs=329.4
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.++.+|..|||+|+|++++|++||+++||||||+++||++||++|++++. |+||+.|++||++|++.++++|++++.|
T Consensus 53 ~tIlk~i~v~hp~akll~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 132 (517)
T 3iyg_Z 53 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVS 132 (517)
T ss_pred HHHHHHccCcCHHHHHHHHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcC
Confidence 567889999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CC-CHHHHHHHHhhccCC------chhHHHHHHHHHHhhccCC------ceeE------------------E--------
Q 014070 91 IT-TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND------LITI------------------F-------- 131 (431)
Q Consensus 91 v~-~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~~------~i~i------------------f-------- 131 (431)
++ +.++|.++|++|+++ .+.|++++++|+.++.+++ .|.| |
T Consensus 133 v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~ 212 (517)
T 3iyg_Z 133 KEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPD 212 (517)
T ss_pred CCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCC
Confidence 87 778999999998864 3578999999998876432 1111 2
Q ss_pred ---EEeCcEEEEecccc-------------CCHHHHHH-----------HHHHHHh--------cCCcEEEEe-cCcchh
Q 014070 132 ---VLDGALVLIYDTKI-------------SNSNVIRQ-----------ASLPCMM--------QGQSLLVVA-EDVENE 175 (431)
Q Consensus 132 ---~l~np~Ill~d~~i-------------~~~~~~~~-----------~le~i~~--------~~~~lvii~-~~i~~~ 175 (431)
+++||+|+++|+++ ++++++.+ .++.+.. .++|+||++ ++|+++
T Consensus 213 m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~ 292 (517)
T 3iyg_Z 213 MKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPF 292 (517)
T ss_pred ccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHH
Confidence 78999999999865 34444433 2333332 356777665 899999
Q ss_pred HHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCC-ceeccEE---EEecceEEEE
Q 014070 176 VLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLK-LGSCKRV---IATMDNVVII 251 (431)
Q Consensus 176 al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~-LG~~~~v---~v~~~~~~~i 251 (431)
++++|..+ +++++++ .++.+|+|||++|||+++++ ++++++++ ||+|+ | ++++++++|+
T Consensus 293 al~~L~~~------gI~~v~~-----v~~~~leria~~tGa~iv~~-----l~~l~~~~~LG~a~-v~e~~ig~~~~~~~ 355 (517)
T 3iyg_Z 293 SLDALAKE------GIIALRR-----AKRRNMERLTLACGGIALNS-----LDDLNPDCLLGHAG-VYEYTLGEEKFTFI 355 (517)
T ss_pred HHHHHHHC------CCEEEEe-----cCHHHHHHHHHHhCCEEecc-----hhhCcccccCCcce-EEEEEEcCceEEEE
Confidence 99999864 4578875 35678999999999999996 89999999 99999 9 5688999999
Q ss_pred cCCCChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCcc
Q 014070 252 GGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSG 330 (431)
Q Consensus 252 ~~~~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGG 330 (431)
+||+++ ..|||+|||+|+++++|+||++|||||++|+++++| +|||||
T Consensus 356 ~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGG 404 (517)
T 3iyg_Z 356 EKCNNP-------------------------------RSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAG 404 (517)
T ss_pred eCCCCc-------------------------------hhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCcc
Confidence 999885 347999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCcccccccc
Q 014070 331 VALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKC 405 (431)
Q Consensus 331 a~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~ 405 (431)
++|++++.+|++|+.+ +|++|+|+++|++||+.+|++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.
T Consensus 405 a~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~ 484 (517)
T 3iyg_Z 405 AVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEA 484 (517)
T ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhc
Confidence 9999999999999987 999999999999999999999999999999999 999874 45679999999999999999
Q ss_pred CcccccccHHHHHHHHHHHHHHHhcC
Q 014070 406 GDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 406 gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
|||||+.||+++|++|+|+|+|||+|
T Consensus 485 gI~dp~~vk~~al~~A~e~a~~iL~i 510 (517)
T 3iyg_Z 485 GIWDNYCVKKQLLHSCTVIATNILLV 510 (517)
T ss_pred cCeecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999986
No 24
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.1e-78 Score=643.99 Aligned_cols=373 Identities=16% Similarity=0.155 Sum_probs=337.1
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-++.++..|||+|+|++++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.++++|++++.|
T Consensus 67 ~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~ 146 (550)
T 3p9d_G 67 ATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVD 146 (550)
T ss_dssp HHHTTTSCCCSHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEEC
T ss_pred HHHHHHccCCCHHHHHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 457888999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCC-----HHHHHHHHhhccC------CchhHHHHHHHHHHhhcc-C------CceeE---------------E------
Q 014070 91 ITT-----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWE-N------DLITI---------------F------ 131 (431)
Q Consensus 91 v~~-----~~~l~~vA~~s~~------~~~~la~li~~A~~~vg~-~------~~i~i---------------f------ 131 (431)
++. .++|.++|++|.+ ++++|++++++|+.++++ + +++++ |
T Consensus 147 v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s 226 (550)
T 3p9d_G 147 ITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSY 226 (550)
T ss_dssp CCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSC
T ss_pred CCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEecCCCccceeEEeeEEEeccccc
Confidence 863 5689999988753 378999999999999984 3 44444 2
Q ss_pred --------EEeCcEEEEeccc-------------cCCHHHHHH-----------HHHHHHhcCCcEEEEecCcchhHHHH
Q 014070 132 --------VLDGALVLIYDTK-------------ISNSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENEVLGD 179 (431)
Q Consensus 132 --------~l~np~Ill~d~~-------------i~~~~~~~~-----------~le~i~~~~~~lvii~~~i~~~al~~ 179 (431)
+++||+|+++|++ |++++++.+ .++++.++|+++|+++++|++.++++
T Consensus 227 ~yf~~~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~ 306 (550)
T 3p9d_G 227 AGFEQQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQF 306 (550)
T ss_dssp TTCSCSCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHT
T ss_pred cccccCcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHH
Confidence 6889999999986 567776655 56788899999999999999999887
Q ss_pred HHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ecceEEEEcCCCC
Q 014070 180 IATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGE 256 (431)
Q Consensus 180 l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~~~~~~i~~~~~ 256 (431)
|..+ ++++++ +.++++|+|||++|||+++++ ++++++++||+|+.|++ +++++++++||++
T Consensus 307 L~~~------gI~~v~-----~v~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~ 370 (550)
T 3p9d_G 307 FADR------NIFCAG-----RVSADDMNRVIQAVGGSIQST-----TSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQ 370 (550)
T ss_dssp TGGG------TCEEEE-----CCCTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTT
T ss_pred HHHc------CCcccc-----CcCHHHHHHHHHHhCCceecc-----hhhCCHHHcCCceEEEEEEeCCeEEEEEecCCC
Confidence 6532 456665 567789999999999999986 89999999999999986 6889999999977
Q ss_pred hhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CCCCccHHHHH
Q 014070 257 LVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLY 335 (431)
Q Consensus 257 ~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vVpGGGa~el~ 335 (431)
+ ++|||+|||+|+++++|+||++|||||++|+++++| +|||||++|++
T Consensus 371 ~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~ 419 (550)
T 3p9d_G 371 A-------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEME 419 (550)
T ss_dssp C-------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHH
T ss_pred C-------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHH
Confidence 4 579999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCccccccccCcccc
Q 014070 336 ASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDP 410 (431)
Q Consensus 336 ~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~---~~~~~G~d~~~g~~~d~~~~gI~DP 410 (431)
++.+|++|+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.|||||
T Consensus 420 ~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp 499 (550)
T 3p9d_G 420 VSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEP 499 (550)
T ss_dssp HHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEE
T ss_pred HHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEec
Confidence 99999999877 999999999999999999999999999999999 999873 4568999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHhcC
Q 014070 411 LKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 411 ~~vk~~ai~~A~~~a~~iL~i 431 (431)
+.||+++|++|+|+|++||+|
T Consensus 500 ~~vk~~al~~A~~~a~~iL~i 520 (550)
T 3p9d_G 500 ALVKINALNSATEATNLILSV 520 (550)
T ss_dssp HHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999986
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.9e-77 Score=634.83 Aligned_cols=373 Identities=17% Similarity=0.197 Sum_probs=325.2
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+-++.+|..|||+|+|++++|++||+++||||||+||||++||++|++++. |+||+.|++||++|++.++++|++++.|
T Consensus 60 ~tIlk~i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~ 139 (546)
T 3p9d_F 60 KVLLTEMQIQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKIS 139 (546)
T ss_dssp HHHHHTSCCCCHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHccCcCHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 457889999999999999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred CC----CHHHHHHHHhhccCC------chhHHHHHHHHHHhhccC-C------ceeE------------------E----
Q 014070 91 IT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-D------LITI------------------F---- 131 (431)
Q Consensus 91 v~----~~~~l~~vA~~s~~~------~~~la~li~~A~~~vg~~-~------~i~i------------------f---- 131 (431)
++ +.++|.++|++|+++ .+.|++++++|+.++.+. + .|.| |
T Consensus 140 v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~ 219 (546)
T 3p9d_F 140 KTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGG 219 (546)
T ss_dssp CSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCC
T ss_pred ccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEeccc
Confidence 84 578999999999874 457899999999887531 1 1222 2
Q ss_pred -------EEeCcEEEEecccc-------------CCHHHHH-----------HHHHHHHh---------cCCcEEEEe-c
Q 014070 132 -------VLDGALVLIYDTKI-------------SNSNVIR-----------QASLPCMM---------QGQSLLVVA-E 170 (431)
Q Consensus 132 -------~l~np~Ill~d~~i-------------~~~~~~~-----------~~le~i~~---------~~~~lvii~-~ 170 (431)
+++||+|+++|+++ ++++++. ..++.+.. +|+|+||++ +
T Consensus 220 ~~~~m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k 299 (546)
T 3p9d_F 220 RHPDMPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQK 299 (546)
T ss_dssp CSSSSCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESS
T ss_pred ccccCcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecC
Confidence 78999999999754 2333222 23344433 567766665 6
Q ss_pred CcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEE---EEecce
Q 014070 171 DVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV---IATMDN 247 (431)
Q Consensus 171 ~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v---~v~~~~ 247 (431)
+|+++++++|..|+ ++++++ .++.+|+|||++|||+++++ ++++++++||+|+.| .+++++
T Consensus 300 ~I~~~Al~~L~~~g------I~~vr~-----v~~~~leria~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~~ 363 (546)
T 3p9d_F 300 GIDPMSLDVFAKHN------ILALRR-----AKRRNMERLQLVTGGEAQNS-----VEDLSPQILGFSGLVYQETIGEEK 363 (546)
T ss_dssp CCCHHHHHHHTTTT------CEEECC-----CCHHHHHHHHHTTTBCCCCC-----CSSCSTTCCBCCCCBCBCCCSSCC
T ss_pred cCcHHHHHHHHHCC------CeeEec-----CCHHHHHHHHHHhCCEEecc-----hhhCCHhHCCcccEEEEEEecCce
Confidence 99999999998764 478874 35678999999999999996 899999999999999 468899
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHHcC-CC
Q 014070 248 VVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IV 326 (431)
Q Consensus 248 ~~~i~~~~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~~g-vV 326 (431)
|+|++||+++ ..|||+|||+|+++++|+||++|||||++|+++++| +|
T Consensus 364 ~~~i~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iV 412 (546)
T 3p9d_F 364 FTYVTENTDP-------------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNII 412 (546)
T ss_dssp CEECSSCSCC-------------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEE
T ss_pred EEEEecCCCC-------------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 9999999885 468999999999999999999999999999999999 99
Q ss_pred CCccHHHHHHHHHHHh---hccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc--------CCCCeeEe
Q 014070 327 PGSGVALLYASKELDK---LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ--------DSSDLGYN 393 (431)
Q Consensus 327 pGGGa~el~~s~~L~~---~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~--------~~~~~G~d 393 (431)
||||++|++++.+|++ |+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||
T Consensus 413 pGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d 492 (546)
T 3p9d_F 413 PGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVD 492 (546)
T ss_dssp ETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCB
T ss_pred eCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEe
Confidence 9999999999999998 5766 999999999999999999999999999999999 999863 45679999
Q ss_pred CCCCccccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 394 PARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 394 ~~~g~~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
+.+|++.||++.|||||+.||+++|++|+|+|++||+|
T Consensus 493 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 530 (546)
T 3p9d_F 493 LNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLC 530 (546)
T ss_dssp TTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred CCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999986
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.9e-78 Score=644.37 Aligned_cols=375 Identities=15% Similarity=0.146 Sum_probs=337.0
Q ss_pred hHHhhhcCCcchHHHHHHHHHHhcccccCCCcchHHHHHHHHHHHHHhhcc-CCChHHHHHHHHHHHHHHHHHHhhhccc
Q 014070 12 VRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRNLDCQARK 90 (431)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~~~s~~qd~evGDGTTt~vvLa~~Ll~ea~~li~-g~~P~~I~~G~~~a~~~~l~~L~~~s~~ 90 (431)
+.++.+|..|||+|+|++++|++||+++||||||+||||++||+++++++. |+||+.|++||++|++.++++|++++.+
T Consensus 69 ~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~ 148 (568)
T 3p9d_H 69 ATMLRELDIVHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVG 148 (568)
T ss_dssp HHHTTTCCCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHcccCCHHHHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 567889999999999999999999999999999999999999999999999 9999999999999999999999999987
Q ss_pred C----CCHHHHHHHHhhccC-----CchhHHHHHHHHHHhhccC-----C-------ceeE------------------E
Q 014070 91 I----TTFEEIAQVGTTAAN-----GDGEIGELIAKVFEKGWEN-----D-------LITI------------------F 131 (431)
Q Consensus 91 v----~~~~~l~~vA~~s~~-----~~~~la~li~~A~~~vg~~-----~-------~i~i------------------f 131 (431)
+ ++.++|.++|++|.+ ++++|++++++|+.+++++ + .|+| |
T Consensus 149 v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~ 228 (568)
T 3p9d_H 149 EITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVF 228 (568)
T ss_dssp CCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCB
T ss_pred cCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEE
Confidence 6 467899999998863 3589999999999999874 3 3444 1
Q ss_pred ---------EEe---CcEEEEeccc-------------cCCHHHHHH-----------HHHHHHhcCCcEEEEecCcchh
Q 014070 132 ---------VLD---GALVLIYDTK-------------ISNSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENE 175 (431)
Q Consensus 132 ---------~l~---np~Ill~d~~-------------i~~~~~~~~-----------~le~i~~~~~~lvii~~~i~~~ 175 (431)
+++ ||+|+++|++ |++++++.+ .++++.+.|+|+||++++|++.
T Consensus 229 dk~~~~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~ 308 (568)
T 3p9d_H 229 NREPEGHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGEL 308 (568)
T ss_dssp SSCBSSGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHH
T ss_pred eecccCCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChH
Confidence 677 9999999986 777877765 5778899999999999999999
Q ss_pred HHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ecceEEEEc
Q 014070 176 VLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIG 252 (431)
Q Consensus 176 al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~~~~~~i~ 252 (431)
++++|..+ +|++||+|+ +.+|+|||++|||+++++ ++++++++||+|+.|++ ++++++|++
T Consensus 309 al~~L~~~------gI~av~~v~-----~~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~ 372 (568)
T 3p9d_H 309 ALHYLNRY------GILVLKVPS-----KFELRRLCRVCGATPLPR-----LGAPTPEELGLVETVKTMEIGGDRVTVFK 372 (568)
T ss_dssp HHHHHHHH------TCEEECCCC-----HHHHHHHHHHHSCCCCSS-----SSCCCGGGCEECSCCCCCEETTEECBCCC
T ss_pred HHHHHHHC------CeEEEecCC-----HHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEEEEecCceEEEEe
Confidence 99999875 478999875 456999999999999997 89999999999999875 458899999
Q ss_pred CCCChhhHHHHHHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchhHHHHHHHHHhhHHHHHHHHHH--c-CCCCCc
Q 014070 253 GSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE--E-GIVPGS 329 (431)
Q Consensus 253 ~~~~~~~i~~r~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~~l~E~~r~i~DAl~~~r~al~--~-gvVpGG 329 (431)
+|+. +++++|||+|||+|+++++|.||++|||||++|++++ + ++||||
T Consensus 373 g~~~-----------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGG 423 (568)
T 3p9d_H 373 QEQG-----------------------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGA 423 (568)
T ss_dssp CCSS-----------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTT
T ss_pred cCCC-----------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCC
Confidence 9863 1257899999999999999999999999999999999 5 599999
Q ss_pred cHHHHHHHHHHHhhccC-CchHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-----------CCCCeeEeCCC
Q 014070 330 GVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ-----------DSSDLGYNPAR 396 (431)
Q Consensus 330 Ga~el~~s~~L~~~~~~-~~~~~~gi~~~a~AL~~ip~~La~NaG~d~~~v-~kl~~~-----------~~~~~G~d~~~ 396 (431)
|++|++++.+|++|+.+ +|++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 424 Ga~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~ 503 (568)
T 3p9d_H 424 GATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDG 503 (568)
T ss_dssp THHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHH
T ss_pred cHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccC
Confidence 99999999999999877 999999999999999999999999999999999 999874 23578999999
Q ss_pred Cc---cccccccCcccccccHHHHHHHHHHHHHHHhcC
Q 014070 397 GN---YVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 431 (431)
Q Consensus 397 g~---~~d~~~~gI~DP~~vk~~ai~~A~~~a~~iL~i 431 (431)
|+ +.||++.|||||+.||+++|++|+|+|++||||
T Consensus 504 g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 541 (568)
T 3p9d_H 504 ESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSI 541 (568)
T ss_dssp HTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC---
T ss_pred CCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 97 999999999999999999999999999999987
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.5e-40 Score=297.78 Aligned_cols=162 Identities=39% Similarity=0.545 Sum_probs=158.9
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|+||+++++++|+||.+.++|+||+||++++++++|++|+.|+++|.++|||||+|+||++|+.+|+|||
T Consensus 29 ~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiA 108 (194)
T 3m6c_A 29 VLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLA 108 (194)
T ss_dssp EEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHH
T ss_pred EEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
.+|||++++.++|+++++++.++||+|++|++++|+|++++|.+++++|+.|++||+++++.++| |+|+||+++|+
T Consensus 109 ilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv~qIr~~ie~t~s~ydkEKLqERlAkLs 188 (194)
T 3m6c_A 109 VVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRAKHLRAEIDKSDSDWDREKLGERLAKLA 188 (194)
T ss_dssp HHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999888 99999999999
Q ss_pred CCeEEE
Q 014070 288 GGYAVL 293 (431)
Q Consensus 288 g~~~tI 293 (431)
||+|+|
T Consensus 189 GGVAVI 194 (194)
T 3m6c_A 189 GGVAVI 194 (194)
T ss_dssp HHBCCC
T ss_pred CCcEEC
Confidence 998865
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=5.9e-40 Score=296.89 Aligned_cols=161 Identities=35% Similarity=0.510 Sum_probs=157.9
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
+++||+||++|+||+++++++|+||.+.++|+||+||++++++++|++|+.|+++|.++|||||+|+||++|+.+|+|||
T Consensus 36 ~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIA 115 (201)
T 3osx_A 36 ELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIA 115 (201)
T ss_dssp EEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHH
T ss_pred EecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----hHHHHHHhhhc
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLKDRLAKLS 287 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~~~~~~~i~~r~~~l~~~l~~~~~----~~l~eRl~~ls 287 (431)
.+|||++++.+.|+++++++.++||+|++|++++|+|++++|.+++++|++|++||+++++.++| |+|+|||++|+
T Consensus 116 ilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qIr~qie~t~S~ydkEKLqERLAKLs 195 (201)
T 3osx_A 116 TLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQIRQQIEESTSDYDREKLQERVAKLA 195 (201)
T ss_dssp HHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999988 99999999999
Q ss_pred CCeEE
Q 014070 288 GGYAV 292 (431)
Q Consensus 288 g~~~t 292 (431)
||+|+
T Consensus 196 GGVAV 200 (201)
T 3osx_A 196 GGVKL 200 (201)
T ss_dssp HTCCC
T ss_pred CCCcC
Confidence 99863
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.97 E-value=1.5e-30 Score=224.73 Aligned_cols=122 Identities=34% Similarity=0.508 Sum_probs=120.0
Q ss_pred EEeCcEEEEeccccCCHHHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCCCCcEEEEeccCcccchhhhHHHHH
Q 014070 132 VLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLA 211 (431)
Q Consensus 132 ~l~np~Ill~d~~i~~~~~~~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~p~~g~~r~~~le~la 211 (431)
.++||+||++|+||+++++++|+||++.++|+||+||++++++++|++|+.|+++|.+++||||+|+||++|++.|+|||
T Consensus 23 ~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiA 102 (145)
T 1srv_A 23 VLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIA 102 (145)
T ss_dssp EEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHH
T ss_pred EeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeEeeCCCCCCccCCCCCCceeccEEEEecceEEEEcC
Q 014070 212 ILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGG 253 (431)
Q Consensus 212 ~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v~~~~~~~i~~ 253 (431)
.+|||++++++.|+++++++.++||+|++|++++|+|++++|
T Consensus 103 ilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 103 AVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp HHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred HHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 999999999999999999999999999999999999999975
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.71 E-value=3.3e-17 Score=149.27 Aligned_cols=123 Identities=9% Similarity=0.138 Sum_probs=98.7
Q ss_pred EEeCcEEEEecccc-------------CCHHHH-----------HHHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCC
Q 014070 132 VLDGALVLIYDTKI-------------SNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 187 (431)
Q Consensus 132 ~l~np~Ill~d~~i-------------~~~~~~-----------~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~ 187 (431)
+++||+|+++|+++ ++++++ ...++++.+.|.++|+++++|++.++++|..+
T Consensus 24 ~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~---- 99 (178)
T 1gml_A 24 YIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRA---- 99 (178)
T ss_dssp EEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHT----
T ss_pred ccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEECCcccHHHHHHHHHC----
Confidence 78999999999753 333333 34567888999999999999999999999864
Q ss_pred CCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCcee-ccEEEE---ecceEEEEcCCCChhhHHHH
Q 014070 188 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA---TMDNVVIIGGSGELVDIQER 263 (431)
Q Consensus 188 ~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~-~~~v~v---~~~~~~~i~~~~~~~~i~~r 263 (431)
+|++++ +.++++|++||++|||+++++ ++++++++||+ |+.|++ ++++++||+||+++
T Consensus 100 --gI~~vr-----~v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~~~------ 161 (178)
T 1gml_A 100 --NVTAIR-----RVRKTDNNRIARACGARIVSR-----PEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDP------ 161 (178)
T ss_dssp --TCEEEC-----CCCHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCCEEEEEEEEETTEEEEEEEEESST------
T ss_pred --CCEEEe-----cCCHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCcccEEEEEEECCeEEEEEECCCCC------
Confidence 467887 456778999999999999997 89999999999 999874 68899999999875
Q ss_pred HHHHHHHhhhccchHHHHHHhhhcCCeEEEEeccCchh
Q 014070 264 CEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKA 301 (431)
Q Consensus 264 ~~~l~~~l~~~~~~~l~eRl~~lsg~~~tI~v~G~t~~ 301 (431)
..|||++||++.+
T Consensus 162 -------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 162 -------------------------KACTILLRGASHH 174 (178)
T ss_dssp -------------------------TSCEEEEEC----
T ss_pred -------------------------CEEEEEEECCCcc
Confidence 4689999999854
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.60 E-value=4.9e-15 Score=132.44 Aligned_cols=110 Identities=21% Similarity=0.316 Sum_probs=91.9
Q ss_pred EEeCcEEEEeccc-------------cCCHHHHH-----------HHHHHHHhcCCcEEEEecCcchhHHHHHHHhccCC
Q 014070 132 VLDGALVLIYDTK-------------ISNSNVIR-----------QASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 187 (431)
Q Consensus 132 ~l~np~Ill~d~~-------------i~~~~~~~-----------~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~ 187 (431)
+++||+|+++|++ +++++++. ..++++.+.|.++|+++++|++.++++|..+
T Consensus 18 ~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~---- 93 (159)
T 1ass_A 18 VVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKE---- 93 (159)
T ss_dssp EEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESSCBCHHHHHHHHHT----
T ss_pred CcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECCccCHHHHHHHHHC----
Confidence 6889999999975 34555543 4467888999999999999999999998864
Q ss_pred CCcEEEEeccCcccchhhhHHHHHHHhCCeEeeCCCCCCccCCCCCCceeccEEEE---ecceEEEEcCCCCh
Q 014070 188 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGEL 257 (431)
Q Consensus 188 ~~~i~avk~p~~g~~r~~~le~la~~tG~~iis~~~~~~l~~~~~~~LG~~~~v~v---~~~~~~~i~~~~~~ 257 (431)
+|++++. .++++|++||++|||+++++ ++++++++||+|+.|++ +++++++|+||++-
T Consensus 94 --gI~~v~~-----v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 94 --GIYAVRR-----VKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp --TCEEECS-----CCHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEEEEETTEEEEEEESCC--
T ss_pred --CCEEEcc-----CCHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEEEEECCeEEEEEECCCCc
Confidence 4678874 56778999999999999997 89999999999999975 68899999999873
No 32
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=21.14 E-value=69 Score=23.42 Aligned_cols=22 Identities=18% Similarity=0.477 Sum_probs=19.3
Q ss_pred HHHHHhhHHHHHHHHHHcCCCC
Q 014070 306 KKLKITNALHAVQAAKEEGIVP 327 (431)
Q Consensus 306 ~~r~i~DAl~~~r~al~~gvVp 327 (431)
.+.+++|+|...-.|++.|.++
T Consensus 14 ed~AieDaiy~L~~aL~~g~I~ 35 (65)
T 2f6m_A 14 QDYALTDTIEALSRMLHRGTIP 35 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999774
Done!