Query 014077
Match_columns 431
No_of_seqs 161 out of 1341
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 05:05:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014077.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014077hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_A Tubulin alpha chain; al 100.0 3E-119 1E-123 910.7 28.1 424 1-424 1-443 (451)
2 3ryc_B Tubulin beta chain; alp 100.0 6E-118 2E-122 899.8 27.2 416 1-424 1-433 (445)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 3E-106 1E-110 824.5 30.2 413 1-419 2-441 (475)
4 2btq_B Tubulin btubb; structur 100.0 1E-104 5E-109 806.7 23.2 405 1-416 1-425 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 3E-104 1E-108 811.3 25.9 413 1-424 3-438 (473)
6 1w5f_A Cell division protein F 100.0 2.5E-44 8.5E-49 354.8 12.8 287 1-342 21-314 (353)
7 2vap_A FTSZ, cell division pro 100.0 2.8E-44 9.7E-49 355.0 12.7 283 3-342 39-327 (364)
8 2r75_1 Cell division protein F 100.0 2.3E-44 7.9E-49 354.1 8.2 296 3-362 9-311 (338)
9 1ofu_A FTSZ, cell division pro 100.0 1.9E-43 6.5E-48 345.5 14.0 295 3-360 13-313 (320)
10 1rq2_A Cell division protein F 100.0 1.8E-43 6.1E-48 351.0 10.5 297 2-361 12-313 (382)
11 2vaw_A FTSZ, cell division pro 100.0 6.9E-43 2.4E-47 348.1 14.7 298 2-361 12-314 (394)
12 2vxy_A FTSZ, cell division pro 100.0 6.2E-43 2.1E-47 347.1 14.2 286 2-342 12-302 (382)
13 3m89_A FTSZ/tubulin-related pr 100.0 7.2E-38 2.5E-42 309.6 13.3 272 4-303 45-350 (427)
14 4dxd_A Cell division protein F 100.0 7.3E-33 2.5E-37 271.9 9.6 267 3-318 19-290 (396)
15 3v3t_A Cell division GTPase FT 100.0 5.3E-32 1.8E-36 263.2 11.4 196 3-240 6-207 (360)
16 4ei7_A Plasmid replication pro 99.8 5.5E-20 1.9E-24 183.8 10.8 345 4-383 18-380 (389)
17 3r4v_A Putative uncharacterize 99.4 6.7E-14 2.3E-18 131.2 6.4 173 1-221 1-177 (315)
18 2e4h_B Tubulin alpha-ubiquitou 97.3 0.00019 6.4E-09 46.0 3.4 27 397-423 1-27 (36)
19 1pdo_A Mannose permease; phosp 72.6 5.8 0.0002 32.7 5.6 31 96-126 41-71 (135)
20 3bed_A PTS system, IIA compone 71.5 2.7 9.4E-05 35.0 3.3 30 96-126 45-74 (142)
21 3lfh_A Manxa, phosphotransfera 61.7 5.3 0.00018 33.4 3.2 39 96-134 43-82 (144)
22 3ipr_A PTS system, IIA compone 55.7 8.2 0.00028 32.5 3.4 39 96-134 41-79 (150)
23 3gx1_A LIN1832 protein; APC633 55.2 15 0.00051 30.0 4.8 40 95-136 43-82 (130)
24 3mtq_A Putative phosphoenolpyr 52.3 6 0.00021 33.8 2.0 31 97-127 61-91 (159)
25 2nx2_A Hypothetical protein YP 45.0 78 0.0027 27.2 8.1 110 97-222 26-137 (181)
26 3g7n_A Lipase; hydrolase fold, 44.7 17 0.00057 33.5 3.9 61 85-149 96-156 (258)
27 3gdw_A Sigma-54 interaction do 41.1 27 0.00093 28.8 4.3 40 95-136 43-84 (139)
28 3uue_A LIP1, secretory lipase 38.9 15 0.0005 34.3 2.5 60 85-148 110-169 (279)
29 2p10_A MLL9387 protein; putati 38.4 11 0.00039 35.1 1.6 34 96-137 13-46 (286)
30 3b48_A Uncharacterized protein 38.0 12 0.00043 30.7 1.6 27 99-126 50-76 (135)
31 3ct6_A PTS-dependent dihydroxy 36.1 19 0.00066 29.4 2.5 26 99-126 45-70 (131)
32 3f1i_H Hepatocyte growth facto 33.6 17 0.00057 28.0 1.5 53 359-416 30-91 (98)
33 3o0d_A YALI0A20350P, triacylgl 30.0 28 0.00096 32.7 2.9 61 86-150 127-187 (301)
34 2aot_A HMT, histamine N-methyl 29.4 92 0.0031 28.3 6.4 56 99-155 36-91 (292)
35 2ful_A EIF-5, eukaryotic trans 28.1 21 0.00071 30.9 1.4 49 367-415 106-159 (177)
36 1uwc_A Feruloyl esterase A; hy 25.3 36 0.0012 31.1 2.7 51 86-140 98-148 (261)
37 1tib_A Lipase; hydrolase(carbo 24.4 36 0.0012 31.2 2.5 53 85-141 110-162 (269)
38 3ngm_A Extracellular lipase; s 24.4 40 0.0014 32.0 2.8 62 85-150 108-169 (319)
39 2iu1_A EIF5, eukaryotic transl 24.0 42 0.0014 29.8 2.7 46 367-412 100-150 (208)
40 1tia_A Lipase; hydrolase(carbo 22.2 73 0.0025 29.3 4.1 53 85-141 109-161 (279)
41 1k2d_P MBP peptide, myelin bas 21.7 22 0.00074 19.8 0.2 8 125-132 16-23 (26)
42 2wlt_A L-asparaginase; hydrola 21.5 1.3E+02 0.0045 28.5 5.9 97 91-192 65-162 (332)
43 3kl4_B DPAP B, YSCV, signal pe 20.9 15 0.00053 22.6 -0.6 11 125-135 4-14 (42)
44 1o7j_A L-asparaginase; atomic 20.2 1.1E+02 0.0037 29.0 5.0 97 91-192 65-162 (327)
No 1
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=3e-119 Score=910.74 Aligned_cols=424 Identities=86% Similarity=1.405 Sum_probs=408.5
Q ss_pred CccEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCC-------------------CCcccceeeecCCCCccccccc
Q 014077 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD-------------------KTHVPRAVFVDLEPTVIDEVRT 61 (431)
Q Consensus 1 M~eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~-------------------~~~~pR~ilvD~e~~~i~~i~~ 61 (431)
|||||+||+||||||||.+||+++|.||+|+++|.+..+ ..|+|||||||+||++|++++.
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~ 80 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCCCccccceeeecCCcchhheeee
Confidence 999999999999999999999999999999999876432 2399999999999999999999
Q ss_pred cccccccCccccccCcccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhh
Q 014077 62 GTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 141 (431)
Q Consensus 62 ~~~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~de 141 (431)
++++++|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||++|||+++||+|||||||+|+.|+|.|+++
T Consensus 81 g~~~~lf~p~~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~e 160 (451)
T 3ryc_A 81 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160 (451)
T ss_dssp STTTTTSCGGGEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccCHHHeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCcceeEEEEecCCCCCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhccc
Q 014077 142 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 221 (431)
Q Consensus 142 yp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 221 (431)
||++.+++++|+|++..+++++++||++|++++|.+++|+++++||++|+++|.+.+++..++|.++|++||++|+++|+
T Consensus 161 y~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 240 (451)
T 3ryc_A 161 YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
T ss_dssp TTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhccccccc
Confidence 99999999999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccchhhhhccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCCCCceeeeeeccc
Q 014077 222 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYR 301 (431)
Q Consensus 222 ~~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~i~R 301 (431)
++||||++|.||.++.+||||||++||++++++|+++..+..++++++.++++++|+++|+|++|+|+.++|+++++++|
T Consensus 241 slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 320 (451)
T 3ryc_A 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320 (451)
T ss_dssp HHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhcc
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccccccCCCCCCceeecCCCCccCCCCCcccccceEEEeccCcchHHHHHHHHHHHHHHhc
Q 014077 302 GDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYA 381 (431)
Q Consensus 302 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~~~~ 381 (431)
|+.+++++.+++..+|.|++..|++|+|++||+++|+++|...++.++++.+.++++|+|+|+|.+.|+++.++|++||+
T Consensus 321 G~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsNsTaI~~~f~rl~~kFd~m~~ 400 (451)
T 3ryc_A 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 400 (451)
T ss_dssp ESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEEEGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecCchHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999888888888899999999999999999999999999999
Q ss_pred cccceeccccCCCChhhHHHHHHHHHHHHHHHHHHccCCCCCC
Q 014077 382 KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGE 424 (431)
Q Consensus 382 ~kAflh~Y~~~Gmee~eF~Ea~~~l~~l~~~Y~~~~~~~~~~~ 424 (431)
||||||||++|||||+||.||+++|.+|+++|++++.+..|+|
T Consensus 401 krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~ 443 (451)
T 3ryc_A 401 KRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGE 443 (451)
T ss_dssp TTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred cceeHhhhcCCccchhhHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 9999999999999999999999999999999999998776543
No 2
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=6.2e-118 Score=899.81 Aligned_cols=416 Identities=43% Similarity=0.830 Sum_probs=402.5
Q ss_pred CccEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCC-----------------CCcccceeeecCCCCccccccccc
Q 014077 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD-----------------KTHVPRAVFVDLEPTVIDEVRTGT 63 (431)
Q Consensus 1 M~eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~-----------------~~~~pR~ilvD~e~~~i~~i~~~~ 63 (431)
|||||+||+||||||||.+||++++.||+++++|.+..+ ..|+|||||||+||++|++++.++
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~g~ 80 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGP 80 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTHHHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHTST
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccccccchhhccccCCCCccccceeEecCCchhhhhhhccc
Confidence 999999999999999999999999999999999876543 249999999999999999999999
Q ss_pred cccccCccccccCcccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhC
Q 014077 64 YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYG 143 (431)
Q Consensus 64 ~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp 143 (431)
++++|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+++||+|||||||+|+.|+|.|+++||
T Consensus 81 ~~~lf~p~~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~ 160 (445)
T 3ryc_B 81 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160 (445)
T ss_dssp TGGGSCGGGEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCT
T ss_pred ccceecccceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeEEEEecCCCCCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhccccc
Q 014077 144 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASL 223 (431)
Q Consensus 144 ~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~ 223 (431)
++.+++++|+|++..+++++++||++|++++|.+++|+++++||++|+++|.+.+++..++|.++|++||++|+++|+++
T Consensus 161 kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~sl 240 (445)
T 3ryc_B 161 DRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240 (445)
T ss_dssp TSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhcccc
Confidence 99999999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccchhhhhccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCCCCceeeeeeccccc
Q 014077 224 RFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGD 303 (431)
Q Consensus 224 r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG~ 303 (431)
||||++|.||.++.+||||||++||++++++|+++..+..++++++.++++++|+++|+|++|+|+.++|+++++++||+
T Consensus 241 Rf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~RG~ 320 (445)
T 3ryc_B 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFRGR 320 (445)
T ss_dssp HSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEEES
T ss_pred ccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeeecC
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHhhhccCccccccCCCCCCceeecCCCCccCCCCCcccccceEEEeccCcchHHHHHHHHHHHHHHhccc
Q 014077 304 VVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKR 383 (431)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~~~~~k 383 (431)
.+++++.+++..++.|++..|++|+|++||+++|+++|... +.++++|+|+|+|.+.|+++.+||++||+||
T Consensus 321 v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~--------~~s~~~lsNsTaI~~~~~rl~~kFd~m~~kr 392 (445)
T 3ryc_B 321 MSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMSSTFIGNSTAIQELFKRISEQFTAMFRRK 392 (445)
T ss_dssp CCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTC--------SEEEEEEEEEGGGHHHHHHHHHHHHHHHTTT
T ss_pred CChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCccc--------ceeeeeecCcHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999998754 6899999999999999999999999999999
Q ss_pred cceeccccCCCChhhHHHHHHHHHHHHHHHHHHccCCCCCC
Q 014077 384 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGE 424 (431)
Q Consensus 384 Aflh~Y~~~Gmee~eF~Ea~~~l~~l~~~Y~~~~~~~~~~~ 424 (431)
||||||++|||||+||.||+++|++|+++|++++.+..++|
T Consensus 393 AFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~ 433 (445)
T 3ryc_B 393 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQ 433 (445)
T ss_dssp TTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHCCTTC-
T ss_pred cchhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 99999999999999999999999999999999998766554
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=3.2e-106 Score=824.49 Aligned_cols=413 Identities=32% Similarity=0.619 Sum_probs=386.6
Q ss_pred CccEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCC-----------------CCCcccceeeecCCCCccccccccc
Q 014077 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPS-----------------DKTHVPRAVFVDLEPTVIDEVRTGT 63 (431)
Q Consensus 1 M~eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~-----------------~~~~~pR~ilvD~e~~~i~~i~~~~ 63 (431)
|||||+||+||||||||++||++++.||+++++|.+.. ..+|+||||+||+||++|++++.++
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~~~ 81 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSP 81 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCCTTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHHST
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCcccccccccceeeeecCCCceecceeEecCCcceeeeecccc
Confidence 79999999999999999999999999999999876432 2249999999999999999999999
Q ss_pred cccccCccccccCcc--cccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhh
Q 014077 64 YRQLFHPEQLISGKE--DAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 141 (431)
Q Consensus 64 ~~~~~~~~~~~~~~~--g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~de 141 (431)
++.+|+|++++.+++ |+||||+.|| +.|++..|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+|+
T Consensus 82 ~~~lf~p~~~i~g~~g~gAgnn~a~G~-~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~de 160 (475)
T 3cb2_A 82 YAKLYNPENIYLSEHGGGAGNNWASGF-SQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDR 160 (475)
T ss_dssp TTTTSCGGGEEECCTTCCCTTCHHHHH-HHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHH
T ss_pred ccccCCccceeecccccCCCCCchhhh-hhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHH
Confidence 999999999999987 7999999995 7899999999999999999999999999999999999999999999999999
Q ss_pred hCCcceeEEEEecCCC-CCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcc
Q 014077 142 YGKKSKLGFTVYPSPQ-VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 220 (431)
Q Consensus 142 yp~~~i~~~~v~P~~~-~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 220 (431)
||++.+++++|+|++. .++.++++||++|++++|.+++|++|+++|++|+++|.+.+++..++|.++|++||++|+++|
T Consensus 161 y~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~iT 240 (475)
T 3cb2_A 161 YPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240 (475)
T ss_dssp STTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHT
T ss_pred cCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhccccc
Confidence 9999999999999975 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCccchhhhhccCCCCCccccccccccccccccc-ccccccCHHHHHHHhcCCCCCCcccCCC---CCceeee
Q 014077 221 ASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK-AYHEQLSVAEITNSAFEPSSMMAKCDPR---HGKYMAC 296 (431)
Q Consensus 221 ~~~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~pl~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~ls~ 296 (431)
.++||||.+|.|+.++.++|||||++||++++++|+++..+ ..++++++.++++++|+++|+|++|+|+ .++|+|+
T Consensus 241 ~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyla~ 320 (475)
T 3cb2_A 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAI 320 (475)
T ss_dssp TTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEEEE
T ss_pred cccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchhhh
Confidence 99999999999999999999999999999999999999877 7889999999999999999999999999 8999999
Q ss_pred eecccccCChhhHHHHHHhhhccCccccccCCCCCCceeecCCCCccCCCCCcccccceEEEeccCcchHHHHHHHHHHH
Q 014077 297 CLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKF 376 (431)
Q Consensus 297 ~~i~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~ 376 (431)
++++||+..++++.+++..++.|++..|++|+|+++|+++|+++|...++ .+.++++|+|+|+|.+.|+++.+||
T Consensus 321 ~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~-----~~~s~~~lsN~TaI~~~f~ri~~kf 395 (475)
T 3cb2_A 321 LNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSA-----HRVSGLMMANHTSISSLFERTCRQY 395 (475)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC----------CCEEEEEEEEGGGHHHHHHHHHHH
T ss_pred HHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCC-----cceEEEEecCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999875432 2578999999999999999999999
Q ss_pred HHHhccccceeccccCCCCh---hhHHHHHHHHHHHHHHHHHHccC
Q 014077 377 DLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYEEVGAE 419 (431)
Q Consensus 377 ~~~~~~kAflh~Y~~~Gmee---~eF~Ea~~~l~~l~~~Y~~~~~~ 419 (431)
++||+||||||||+++|||| +||.||+++|++|+++|++++.+
T Consensus 396 d~m~~rrAflHwY~~eGm~e~~~~eF~EA~~~l~~li~eY~~~~~~ 441 (475)
T 3cb2_A 396 DKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAATRP 441 (475)
T ss_dssp HHHHHTTCSCHHHHTSGGGSSCCHHHHHHHHHHHHHHHHHHHTTSG
T ss_pred HHHhhcccceeeecccCccccchhHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999987 99999999999999999997643
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=1.3e-104 Score=806.69 Aligned_cols=405 Identities=39% Similarity=0.722 Sum_probs=362.5
Q ss_pred CccEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCC------------------CCcccceeeecCCCCcccccccc
Q 014077 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD------------------KTHVPRAVFVDLEPTVIDEVRTG 62 (431)
Q Consensus 1 M~eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~------------------~~~~pR~ilvD~e~~~i~~i~~~ 62 (431)
|||||+||+||||||||++||++++.||+++++|.+..+ .+|+||||+||+||++|++++.+
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~~ 80 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSNAAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEGG 80 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC-------CCCTTTEEEEETTEEEECEEEEEECC---------
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCcccccccccccceeeecCCCceeeeeEEEecCcccccccccc
Confidence 999999999999999999999999999999998765321 23999999999999999999999
Q ss_pred ccccccCccccccCcccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhh
Q 014077 63 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDY 142 (431)
Q Consensus 63 ~~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~dey 142 (431)
+++.+|+|++++.+++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+|+|
T Consensus 81 ~~~~lf~p~~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y 160 (426)
T 2btq_B 81 DMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAY 160 (426)
T ss_dssp ---CCCCTTSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTC
T ss_pred ccccccCcccccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeEEEEecCCCCCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcccc
Q 014077 143 GKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTAS 222 (431)
Q Consensus 143 p~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~ 222 (431)
|++.+++++|+|.+..++.++++||++|++++|.+++|++|++||++|+++|.+.++ ..++|.++|++||++|+++|.+
T Consensus 161 ~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-~~~~f~~~N~lia~~v~~it~~ 239 (426)
T 2btq_B 161 PKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-RSPNYMDLNNIIALIVSSVTAS 239 (426)
T ss_dssp TTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-SCCCHHHHHHHHHHHHHHHHHH
T ss_pred CcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-CCcHHHHHHHHHHhhhcchhhh
Confidence 999999999999987789999999999999999999999999999999999999988 7899999999999999999999
Q ss_pred cccCCCCccchhhhhccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCCCCceeeeeecccc
Q 014077 223 LRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRG 302 (431)
Q Consensus 223 ~r~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG 302 (431)
+||||.+|.|+.++.++|+|||++||++++++|+++..+..++++++.++++++|+++|+|++|+|+.++|+|+++++||
T Consensus 240 lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~rG 319 (426)
T 2btq_B 240 LRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFRG 319 (426)
T ss_dssp HHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEEC
T ss_pred ccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHcC
Confidence 99999999999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred cCChhhHHHHHHhhhccCccccccCCC--CCCceeecCCCCccCCCCCcccccceEEEeccCcchHHHHHHHHHHHHHHh
Q 014077 303 DVVPKDVNAAVATIKTKRTIQFVDWCP--TGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMY 380 (431)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~f~~w~p--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~~~ 380 (431)
+.+++++.+++..+ |++..|++|+| +++|+++|+++|... +.++++|+|+|+|.+.|+++.++|++||
T Consensus 320 ~v~~~~v~~~~~~i--k~~~~fv~W~p~~~~~k~~i~~~~p~~~--------~~s~~~lsNstaI~~~~~~~~~~f~~m~ 389 (426)
T 2btq_B 320 DVKAKDVDENMATI--RKSLNYASYMPASGGLKLGYAETAPEGF--------ASSGLALVNHTGIAAVFERLIAQFDIMF 389 (426)
T ss_dssp C----CTTTTHHHH--HTTSCBCTTSCSSCSEEEEEESCCCTTC--------SSBCCEEEEEGGGHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH--hcCCCCcccCCCCCceeeeeeccCCCCC--------cceeEEecCChHHHHHHHHHHHHHHHHh
Confidence 99999999888877 67889999999 999999999998643 5689999999999999999999999999
Q ss_pred ccccceeccccCCCChhhHHHHHHHHHHHHHHHHHH
Q 014077 381 AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 416 (431)
Q Consensus 381 ~~kAflh~Y~~~Gmee~eF~Ea~~~l~~l~~~Y~~~ 416 (431)
+||||||||++|||||+||.||+++|++|+++|+++
T Consensus 390 ~rrAflh~Y~~eGmee~eF~ea~~~l~~l~~eY~~~ 425 (426)
T 2btq_B 390 DNHAYTHWYENAGVSRDMMAKARNQIATLAQSYRDA 425 (426)
T ss_dssp HTTSSHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccchhhhccCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999986
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=3.1e-104 Score=811.30 Aligned_cols=413 Identities=38% Similarity=0.748 Sum_probs=377.1
Q ss_pred CccEEEEecCCchhHHHHHHHHHHHhhcCCCCC-CCCCC-------------------CCCcccceeeecCCCCcccccc
Q 014077 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPD-GQMPS-------------------DKTHVPRAVFVDLEPTVIDEVR 60 (431)
Q Consensus 1 M~eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~-~~~~~-------------------~~~~~pR~ilvD~e~~~i~~i~ 60 (431)
|||||+||+||||||||++||++++.||+++++ |.+.. ..+|+||||+||+||++|+.++
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~~~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~~i~ 82 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAPRGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNVK 82 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCCCSSSGGGTEEECSCC--CCEEECEEEEESSSHHHHHHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCcccccccceecccccccCCceeeeeeEecCcchhhhhhh
Confidence 999999999999999999999999999999988 65542 2358999999999999999999
Q ss_pred ccccccccCccccccCcccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhh
Q 014077 61 TGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 140 (431)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~d 140 (431)
.++ +.+|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+|
T Consensus 83 ~~~-~~lf~p~~~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~e 161 (473)
T 2bto_A 83 ATS-GSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKE 161 (473)
T ss_dssp HHS-TTCSCGGGEEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHH
T ss_pred ccc-cccccccceEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHHH
Confidence 888 8899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCcceeEEEEecCCCCCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcc
Q 014077 141 DYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 220 (431)
Q Consensus 141 eyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t 220 (431)
+||++.+++++|+|++..++.++++||++|++++|.+++|++|+++|++|+++|.+.+++..++|.++|++||+.|+++|
T Consensus 162 ~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~~it 241 (473)
T 2bto_A 162 KYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGIT 241 (473)
T ss_dssp HTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhcccch
Confidence 99999999999999987789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCccc--hhhhhccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCCCCceeeeee
Q 014077 221 ASLRFDGALNVD--VTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCL 298 (431)
Q Consensus 221 ~~~r~~~~~n~~--l~~~~~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~ 298 (431)
.++||||.+|.| +.++.++|||||++||++++++|+++.....++..++.++++++|++.|+|+.|+|+.++|+++++
T Consensus 242 ~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla~~~ 321 (473)
T 2bto_A 242 ASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLSTAV 321 (473)
T ss_dssp HHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEEEEE
T ss_pred hhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHHHHH
Confidence 999999999999 999999999999999999999999998888889999999999999999999999999999999999
Q ss_pred cccccCChhhH-HHHHHhhhccCccccccCCCCCCceeecCCCCccCCCCCcccccceEEEeccCcchHHHHHHHHHHHH
Q 014077 299 MYRGDVVPKDV-NAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFD 377 (431)
Q Consensus 299 i~RG~~~~~~~-~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~ 377 (431)
++||+.+++++ .+++..++.+++..| |+|+++|+++|+++|... +.++++|+|+|+|.+.|+++.++|+
T Consensus 322 i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~kv~i~~~pp~g~--------~~s~~~lsNsTaI~~~~~~l~~kf~ 391 (473)
T 2bto_A 322 LYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIGYVEQPGISH--------RKSMVLLANNTEIARVLDRICHNFD 391 (473)
T ss_dssp EEEEC----CCHHHHHHHHHTTSCBCS--SSCCCEEEEEESSCCSSC--------SEEEEEEEEETTHHHHHHHHHHHHH
T ss_pred hhcCCCChHHhhHHHHHHHHhhcccce--ecCCcceecccccCCcCc--------ceeEEEecCCchHHHHHHHHHHHHH
Confidence 99999999999 999999998888888 999999999999998743 6799999999999999999999999
Q ss_pred HHhccccceeccccCCCChhhHHHHHHHHHHHHHHHHHHccCCCCCC
Q 014077 378 LMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGE 424 (431)
Q Consensus 378 ~~~~~kAflh~Y~~~Gmee~eF~Ea~~~l~~l~~~Y~~~~~~~~~~~ 424 (431)
+||+||||||||+++||||+||.||+++|++|+++|++++.+..|++
T Consensus 392 ~m~~rrAflH~Y~~eGmee~eF~EA~e~l~~l~~eY~~~~~~~~~~~ 438 (473)
T 2bto_A 392 KLWQRKAFANWYLNEGMSEEQINVLRASAQELVQSYQVAEESGAKAK 438 (473)
T ss_dssp HHHTTTTTHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred HHhhhcchhHHhhccCCcHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 99999999999999999999999999999999999999986654443
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=2.5e-44 Score=354.83 Aligned_cols=287 Identities=14% Similarity=0.204 Sum_probs=242.3
Q ss_pred CccEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCccccccC----
Q 014077 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISG---- 76 (431)
Q Consensus 1 M~eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~~~~---- 76 (431)
|++|++||+|||||++++++|+ |+++. .+.+.+|+|.+.++.... |+.+..+
T Consensus 21 ~~~I~vIGvGg~G~n~vn~m~~-----~gi~g-----------v~~ia~nTD~q~L~~~~a--------~~~i~iG~~~t 76 (353)
T 1w5f_A 21 NLKIKVIGVGGAGNNAINRMIE-----IGIHG-----------VEFVAVNTDLQVLEASNA--------DVKIQIGENIT 76 (353)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHH-----HCCTT-----------EEEEEEESCHHHHHTCCC--------SEEEECCTTTT
T ss_pred CCEEEEECcCchHHHHHHHHHH-----hCCCC-----------CCEEEEcCCHHHHhcCCC--------CcEEEccCccc
Confidence 5789999999999999999997 56531 578999999988876543 3445444
Q ss_pred -cccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecC
Q 014077 77 -KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS 155 (431)
Q Consensus 77 -~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~ 155 (431)
+.|+||||+.| ++..++.+|.||+++|.|| +|+|+||+|||||||+|+.|++.+++ |+ +++++|+|.
T Consensus 77 ~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~~i~as~GGGTGSG~ap~la~~~ke-~g---~lt~~Vvt~ 144 (353)
T 1w5f_A 77 RGLGAGGRPEIG-----EQAALESEEKIREVLQDTH---MVFITAGFGGGTGTGASPVIAKIAKE-MG---ILTVAIVTT 144 (353)
T ss_dssp TTSCCTTCHHHH-----HHHHHHTHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHHHHH-TT---CEEEEEEEE
T ss_pred CCCCCCCChHHH-----HHHHHHHHHHHHHHHccCC---EEEEEeccCCCccccHHHHHHHHHHH-hC---CcEEEEEeC
Confidence 35999999965 6889999999999999998 48999999999999999999999987 65 666666665
Q ss_pred CCCCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcccccccCCCCcc--ch
Q 014077 156 PQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNV--DV 233 (431)
Q Consensus 156 ~~~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~n~--~l 233 (431)
+...+..+++||+.+++++|.+++|.+|++||++|+++|.+.+++. ++|+.+|++|++.++++|.++||||.+|. |+
T Consensus 145 Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~v~~it~~ir~pG~iNv~~D~ 223 (353)
T 1w5f_A 145 PFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIK-DAFLKADETLHQGVKGISELITKRGYIRLTSRF 223 (353)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_pred CcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHH-HHHHHHHHHHHHHhcCchhhccCCcccccccCH
Confidence 5556888999999999999999999999999999999998888776 58999999999999999999999999999 99
Q ss_pred hhhhccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCCCCceeeeeecccccCChhhHHHHH
Q 014077 234 TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV 313 (431)
Q Consensus 234 ~~~~~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG~~~~~~~~~~~ 313 (431)
.++.++|+| |+++++..+.+.- .....+++++.+ .+++..|+++.++++.+++..||+.+++++.+++
T Consensus 224 ~dv~t~L~~-~g~a~~g~g~a~g---------~~~v~ea~~~a~--~~~ll~~d~~~ak~~l~~i~~~~dl~~~ev~~a~ 291 (353)
T 1w5f_A 224 ARIESVMKD-AGAAILGIGVGKG---------EHRAREAAKKAM--ESKLIEHPVENASSIVFNITAPSNIRMEEVHEAA 291 (353)
T ss_dssp HHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHH--TCTTCCSCGGGCSEEEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHhccC-CCeeEEEEeecCC---------cchHHHHHHHHH--hCCCcCCChhhcceeEEEEEeCCCCCHHHHHHHH
Confidence 999999999 9999887665421 135778888888 3667779999999999999999999999999999
Q ss_pred HhhhccCccccccCCCCCCceeecCCCCc
Q 014077 314 ATIKTKRTIQFVDWCPTGFKCGINYQPPT 342 (431)
Q Consensus 314 ~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 342 (431)
..++.+... |.+++++.+..++.
T Consensus 292 ~~I~~~~~~------~~~i~~G~~~d~~~ 314 (353)
T 1w5f_A 292 MIIRQNSSE------DADVKFGLIFDDEV 314 (353)
T ss_dssp HHHHTTSCT------TSEEEEEEEECTTS
T ss_pred HHHHHhhCC------CCcEEEEEEeCCCC
Confidence 888765422 56777777765543
No 7
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=2.8e-44 Score=355.01 Aligned_cols=283 Identities=18% Similarity=0.257 Sum_probs=240.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCccccccC-----c
Q 014077 3 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISG-----K 77 (431)
Q Consensus 3 eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~~~~-----~ 77 (431)
+|++||+|||||+|+++||+ +++.. -..+.+|+|.+.++.+.. |+.+..| .
T Consensus 39 ~I~vIGvGg~G~n~v~~m~~-----~gi~g-----------v~fia~NTD~q~L~~~~a--------~~ki~iG~~~t~G 94 (364)
T 2vap_A 39 KITVVGCGGAGNNTITRLKM-----EGIEG-----------AKTVAINTDAQQLIRTKA--------DKKILIGKKLTRG 94 (364)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----HTCTT-----------EEEEEEESBHHHHHTSCC--------SEEEECCTTTTTT
T ss_pred eEEEEeeCchHHHHHHHHHH-----hCCCC-----------CCEEEEcCcHHHHhcCCC--------CcEEEeccccccC
Confidence 69999999999999999997 34421 256899999888776643 3344443 4
Q ss_pred ccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCCC
Q 014077 78 EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 157 (431)
Q Consensus 78 ~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~~ 157 (431)
.|+||||+.| ++..++.+|+||+++|.||.+ +++||+|||||||+++.|++.+++ | .+++++|+|.+.
T Consensus 95 ~GAGnn~a~G-----~~~~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~lke-~---~~lt~~Vv~~Pf 162 (364)
T 2vap_A 95 LGAGGNPKIG-----EEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEISKK-I---GALTVAVVTLPF 162 (364)
T ss_dssp BCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHHHH-T---TCEEEEEEEECC
T ss_pred CCCCCChHHH-----HHHHHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHHHH-h---CCcEEEEeCCCc
Confidence 6999999987 789999999999999999977 999999999999999999999998 7 466777776666
Q ss_pred CCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcccccccCCCCccchhhhh
Q 014077 158 VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 237 (431)
Q Consensus 158 ~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~n~~l~~~~ 237 (431)
..+.++++||+++++++|.+++|.+|++||++|+++|. .+++ .++|+++|++|++.++++|.++||||.+|.|+.++.
T Consensus 163 ~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i-~~af~~~N~li~~~v~~it~~ir~pG~iNvD~~dv~ 240 (364)
T 2vap_A 163 VMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPL-KLAFKVADEVLINAVKGLVELITKDGLINVDFADVK 240 (364)
T ss_dssp GGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCH-HHHHHHHHHHHHHHHHHHHHHHHSCCSBCCCHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCCh-hhhhhhHHHHHHHHHhhhhHHhhcCCceeccHHHHH
Confidence 56789999999999999999999999999999999998 7777 789999999999999999999999999999999999
Q ss_pred ccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCCCCceeeeeecccccCChhhHHHHHHhhh
Q 014077 238 TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIK 317 (431)
Q Consensus 238 ~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG~~~~~~~~~~~~~~~ 317 (431)
++|+| |++|++..++++- .....+++++.+ .+++..|+++.++++.+++..||+.+++++.+++..++
T Consensus 241 t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~--~~~ll~~d~~~ak~~l~~i~~~~dl~~~ev~~a~~~I~ 308 (364)
T 2vap_A 241 AVMNN-GGLAMIGIGESDS---------EKRAKEAVSMAL--NSPLLDVDIDGATGALIHVMGPEDLTLEEAREVVATVS 308 (364)
T ss_dssp HHHTT-CEEEEEEEEEECS---------TTHHHHHHHHHH--TCTTCCSCGGGCCEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HhccC-CCeeEEEEEecCC---------cchHHHHHHHHH--hCcCcCcChhhcceEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 99999 9999988776532 134778888887 46788899999999999999999999999999988887
Q ss_pred ccCccccccCCC-CCCceeecCCCCc
Q 014077 318 TKRTIQFVDWCP-TGFKCGINYQPPT 342 (431)
Q Consensus 318 ~~~~~~f~~w~p-~~~~~~~~~~~~~ 342 (431)
.+.. | .+++++.+..++.
T Consensus 309 ~~~~-------~~a~ii~G~~~~~~~ 327 (364)
T 2vap_A 309 SRLD-------PNATIIWGATIDENL 327 (364)
T ss_dssp HHSC-------TTCEEEEEEEECTTC
T ss_pred HhcC-------CCCCEEEEEEecCCC
Confidence 6532 3 4566666665544
No 8
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=2.3e-44 Score=354.14 Aligned_cols=296 Identities=16% Similarity=0.252 Sum_probs=250.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCccccccC-----c
Q 014077 3 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISG-----K 77 (431)
Q Consensus 3 eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~~~~-----~ 77 (431)
.|..|++||+|+++..++|+ +++. -++.|++|+|++.++.+.. |+.+..| +
T Consensus 9 ~I~viGvGg~G~n~vn~m~~-----~~~~-----------gv~~ia~NTD~q~L~~~~a--------~~ki~iG~~~t~g 64 (338)
T 2r75_1 9 KIKVIGVGGGGSNAVNRMYE-----DGIE-----------GVELYAINTDVQHLSTLKV--------PNKIQIGEKVTRG 64 (338)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC-----------SCEEEEEESBHHHHHTCCC--------SEEEECCHHHHTT
T ss_pred eEEEEeeCccHHHHHHHHHH-----hCCC-----------CceEEEEECCHHHHhcCCC--------CcEEEecCcccCC
Confidence 48999999999999999996 3431 1789999999999887643 3444444 4
Q ss_pred ccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCCC
Q 014077 78 EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 157 (431)
Q Consensus 78 ~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~~ 157 (431)
.|+||||+.| ++..++.+|+||+++|.||.+ +++||+|||||||+++. ++.|+++|| +++++|+|.+.
T Consensus 65 ~GAGnn~a~G-----~~~~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l~~e~g---~lt~~Vv~~P~ 132 (338)
T 2r75_1 65 LGAGAKPEVG-----EEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKTAKEMG---ILTVAVATLPF 132 (338)
T ss_dssp BCCTTCHHHH-----HHHHHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHHHHHTT---CEEEEEEEECC
T ss_pred CCCCCChHHH-----HHHHHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHHHHhcC---CCEEEEeCCCc
Confidence 7999999976 689999999999999999988 99999999999999999 667888886 67888888777
Q ss_pred CCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcccccccCCCCccchhhhh
Q 014077 158 VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 237 (431)
Q Consensus 158 ~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~n~~l~~~~ 237 (431)
..+.++++||+++++++|.+++|.+|++||++|+++|.+.+++. ++|+++|++|++.++++|.++||||.+|.|+.++.
T Consensus 133 ~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~N~~i~~~v~~it~~ir~pG~iNvD~~dv~ 211 (338)
T 2r75_1 133 RFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIK-DAFKEVDSVLSKAVRGITSIVVTPAVINVDFADVR 211 (338)
T ss_dssp GGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHH-HHHHHHHHHHHHHHHHHHHHHHSCCSBCCCHHHHH
T ss_pred cccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChH-HHHHHHHHHHHHHHhhhhhhhccCCceeCCHHHhh
Confidence 77899999999999999999999999999999999998888877 79999999999999999999999999999999999
Q ss_pred ccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCCCCceeeeeecccc--cCChhhHHHHHHh
Q 014077 238 TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRG--DVVPKDVNAAVAT 315 (431)
Q Consensus 238 ~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG--~~~~~~~~~~~~~ 315 (431)
++|+|+ +++|+..+++|- .....+.....++..+|+ .|++..|++ +++++|| +.+++++.+++..
T Consensus 212 t~L~~~-g~a~~g~g~a~g----~~r~~~a~~~ai~s~lle-~n~~~~a~~-------~l~~i~G~~dl~~~ev~~a~~~ 278 (338)
T 2r75_1 212 TTLEEG-GLSIIGMGEGRG----DEKADIAVEKAVTSPLLE-GNTIEGARR-------LLVTIWTSEDIPYDIVDEVMER 278 (338)
T ss_dssp HHHTTC-EEEEEEEEEEES----TTHHHHHHHHHHHCBSSB-SSCGGGCSE-------EEEEEEECTTSCTTHHHHHHHH
T ss_pred hheeCC-ccceeeeccCCc----cchHHHHHHHHHHhhhhc-ccchhhhhe-------EEEEEEcCCCCCHHHHHHHHHH
Confidence 999999 789988888872 122233344667778888 777877764 7888999 8899999999888
Q ss_pred hhccCccccccCCCCCCceeecCCCCccCCCCCcccccceEEEeccC
Q 014077 316 IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNS 362 (431)
Q Consensus 316 ~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~ 362 (431)
++.+. + .|.+++++++..+|... +.++|+|+|.
T Consensus 279 I~~~~-----~-~~~~i~~G~~~~~~~~~--------~~~vtviatg 311 (338)
T 2r75_1 279 IHSKV-----H-PEAEIIFGAVLEPQEQD--------FIRVAIVATD 311 (338)
T ss_dssp HHHHS-----C-TTCEEEEEEEECTTCCS--------EEEEEEEEEC
T ss_pred HHHhc-----C-CCCcEEEEEEeCCCCCC--------eEEEEEEECC
Confidence 87654 2 68889999998877632 6778888886
No 9
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=1.9e-43 Score=345.47 Aligned_cols=295 Identities=15% Similarity=0.193 Sum_probs=242.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCccccccC-----c
Q 014077 3 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISG-----K 77 (431)
Q Consensus 3 eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~~~~-----~ 77 (431)
+|++||+|||||+|++++|+ |++.. .+.+.+|+|.+.++.+.. |+.+..+ +
T Consensus 13 ~I~viGvGg~G~n~v~~m~~-----~gi~g-----------v~~i~~ntD~q~L~~~~a--------~~~i~iG~~~t~g 68 (320)
T 1ofu_A 13 VIKVIGVGGGGGNAVNHMAK-----NNVEG-----------VEFICANTDAQALKNIAA--------RTVLQLGPGVTKG 68 (320)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCCS-----------EEEEEEESBTGGGSSCSC--------SEEEECCHHHHTT
T ss_pred EEEEECcCchHHHHHHHHHH-----hCCCC-----------CCEEEEcCCHHHHhcCCC--------CcEEEccCCccCC
Confidence 69999999999999999997 55531 578999999998877653 4455444 4
Q ss_pred ccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCCC
Q 014077 78 EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 157 (431)
Q Consensus 78 ~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~~ 157 (431)
.|+||||+.| ++..++.+|+||+++|.|| +|+++||+|||||||+++.|++ +..+|+ +++++|+|.+.
T Consensus 69 ~GAG~n~~~G-----~~~~ee~~d~I~~~le~~d---~~~i~as~GGGTGSG~~~~la~-~a~e~g---~lt~~vv~~P~ 136 (320)
T 1ofu_A 69 LGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAE-VAKEMG---ILTVAVVTRPF 136 (320)
T ss_dssp BCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHTT---CEEEEEEEECC
T ss_pred CCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHHhcC---CcEEEEEeCCc
Confidence 5999999965 6888999999999999998 5899999999999999998765 556673 45666665555
Q ss_pred CCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcccccccCCCCccchhhhh
Q 014077 158 VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 237 (431)
Q Consensus 158 ~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~n~~l~~~~ 237 (431)
..+..+++||+.+++++|.+++|.+|++||++|+++|.+.+++. ++|+.+|++|++.++++|.++||||.+|.|+.++.
T Consensus 137 ~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~n~~l~~~v~~it~~ir~pG~iNvD~~dv~ 215 (320)
T 1ofu_A 137 PFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGISDIIKRPGMINVDFADVK 215 (320)
T ss_dssp GGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHHHHHHHSCSSSSCCHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHH-HHHHHHHHHHHHHhcccHhhcccCCceeecHHHHH
Confidence 56788999999999999999999999999999999999888876 58999999999999999999999999999999999
Q ss_pred ccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcc-cCCCCCceeeeeecccccCChhhHHHHHHhh
Q 014077 238 TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAK-CDPRHGKYMACCLMYRGDVVPKDVNAAVATI 316 (431)
Q Consensus 238 ~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~ls~~~i~RG~~~~~~~~~~~~~~ 316 (431)
++|+| |+++++..++++- .....+++++.++ +++.. |+++.++++.+++..||+.+++++.+++..+
T Consensus 216 t~l~~-~g~~~~g~g~a~g---------~~~~~~a~~~a~~--~~ll~~~d~~~ak~~l~~i~~~~d~~~~ev~~a~~~i 283 (320)
T 1ofu_A 216 TVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR--NPLLEDVNLQGARGILVNITAGPDLSLGEYSDVGNII 283 (320)
T ss_dssp HHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCCGGGCSEEEEEEEECTTCCHHHHHHHHHHH
T ss_pred HhccC-CCeeEEEEEecCc---------ccHHHHHHHHHHh--ccccccCCccccceEEEEEEeCCCCCHHHHHHHHHHH
Confidence 99999 9999988776531 1235778887776 45665 9999999999999999999999999998888
Q ss_pred hccCccccccCCCCCCceeecCCCCccCCCCCcccccceEEEec
Q 014077 317 KTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIS 360 (431)
Q Consensus 317 ~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 360 (431)
+.+... |.+++.+.+..++... +..+|+++
T Consensus 284 ~~~~~~------~~~ii~G~~~~~~~~~--------~v~vtvia 313 (320)
T 1ofu_A 284 EQFASE------HATVKVGTVIDADMRD--------ELHVTVVA 313 (320)
T ss_dssp HHHSCT------TSEEEEEEEECTTCCS--------EEEEEEEE
T ss_pred HHhcCC------CCcEEEEEEcCCCCCC--------eEEEEEEE
Confidence 765322 4667777776654421 45666665
No 10
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=1.8e-43 Score=351.02 Aligned_cols=297 Identities=14% Similarity=0.174 Sum_probs=240.6
Q ss_pred ccEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCccccccC-----
Q 014077 2 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISG----- 76 (431)
Q Consensus 2 ~eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~~~~----- 76 (431)
.+|++|++|||||+|+.+||+ |++.. .+.+.+|+|.+.++.+.. |+.+..+
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~g-----------v~fia~NTD~q~L~~~~a--------~~~i~iG~~~t~ 67 (382)
T 1rq2_A 12 AVIKVVGIGGGGVNAVNRMIE-----QGLKG-----------VEFIAINTDAQALLMSDA--------DVKLDVGRDSTR 67 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCCS-----------EEEEEEESCHHHHHHCCC--------SEEEECCTTTC-
T ss_pred CEEEEECcCchHHHHHHHHHH-----hCCCC-----------CCEEEecCCHHHHhcCCC--------CcEEEecccccC
Confidence 479999999999999999997 55531 578999999988876642 3445444
Q ss_pred cccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCC
Q 014077 77 KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSP 156 (431)
Q Consensus 77 ~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~ 156 (431)
..|+||||+.| ++..++.+|+||+++|.|| +|+|+||+|||||||+++.|++ |+.+|+ +++++|+|.+
T Consensus 68 G~GAG~n~~~G-----~~~aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae-la~e~g---~ltvsVv~~P 135 (382)
T 1rq2_A 68 GLGAGADPEVG-----RKAAEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS-IARKLG---ALTVGVVTRP 135 (382)
T ss_dssp ----CCCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHHT---CEEEEEEEEC
T ss_pred CCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHHHcC---CcEEEEEecC
Confidence 45999999966 6889999999999999998 5899999999999999999998 777787 4455555544
Q ss_pred CCCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcccccccCCCCccchhhh
Q 014077 157 QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEF 236 (431)
Q Consensus 157 ~~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~n~~l~~~ 236 (431)
...+..+++||+++++++|.+++|.+|++||++|+++|.+.+++. ++|..+|++|++.++++|.++||||.+|.|+.++
T Consensus 136 f~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~vs~it~~ir~pG~iNvD~~dv 214 (382)
T 1rq2_A 136 FSFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLM-DAFRSADEVLLNGVQGITDLITTPGLINVDFADV 214 (382)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHH-HHHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHH
T ss_pred cccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHH-HHHHHHHHHHHHHHHHHHHHHccCCceeccHHHH
Confidence 456889999999999999999999999999999999998888776 6899999999999999999999999999999999
Q ss_pred hccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCCCCceeeeeecccccCChhhHHHHHHhh
Q 014077 237 QTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATI 316 (431)
Q Consensus 237 ~~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG~~~~~~~~~~~~~~ 316 (431)
.++|+| |+++++..+.+.- .....++++..++ +++..|+++.++++.+.+..+++.+++++.+++..+
T Consensus 215 ~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~i~gg~dl~~~ev~~a~~~I 282 (382)
T 1rq2_A 215 KGIMSG-AGTALMGIGSARG---------EGRSLKAAEIAIN--SPLLEASMEGAQGVLMSIAGGSDLGLFEINEAASLV 282 (382)
T ss_dssp HHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCGGGCSEEEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHhccC-CCeeEEEeeeccc---------ccHHHHHHHHHHh--CcCcCCChhchheEEEEEEeCCCCCHHHHHHHHHHH
Confidence 999999 8888877665421 1346788888774 778889999999998766666689999999998888
Q ss_pred hccCccccccCCCCCCceeecCCCCccCCCCCcccccceEEEecc
Q 014077 317 KTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN 361 (431)
Q Consensus 317 ~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N 361 (431)
+.+.. .+.+++++++..++... +..+|+|+.
T Consensus 283 ~~~~~------~~a~ii~G~~~d~~~~~--------~v~VtvIat 313 (382)
T 1rq2_A 283 QDAAH------PDANIIFGTVIDDSLGD--------EVRVTVIAA 313 (382)
T ss_dssp HHHSC------TTCEEEEEEEECGGGTT--------EEEEEEEEE
T ss_pred HHhhC------CCCCEEEEEEeCCCCCC--------eEEEEEEEc
Confidence 76533 35677777776654321 455666653
No 11
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=6.9e-43 Score=348.08 Aligned_cols=298 Identities=14% Similarity=0.196 Sum_probs=246.8
Q ss_pred ccEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCccccccC-----
Q 014077 2 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISG----- 76 (431)
Q Consensus 2 ~eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~~~~----- 76 (431)
.+|++|++|||||+|+.+||+ |+++. .+.+.+|+|.+.++.+.. |+.+..|
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~g-----------v~fia~NTD~q~L~~~~a--------~~ki~iG~~~t~ 67 (394)
T 2vaw_A 12 AVIKVIGVGGGGGNAVNHMAK-----NNVEG-----------VEFICANTDAQALKNIAA--------RTVLQLGPGVTK 67 (394)
T ss_dssp CCEEEEEEHHHHHHHHHHHHT-----TTCCS-----------EEEEEEESCTTTTSSCSS--------SCEEECCHHHHS
T ss_pred CEEEEECcCchHHHHHHHHHH-----cCCCC-----------CCEEEecCCHHHHhcCCC--------CcEEEccccccC
Confidence 479999999999999999996 66531 578999999998876542 3445444
Q ss_pred cccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCC
Q 014077 77 KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSP 156 (431)
Q Consensus 77 ~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~ 156 (431)
+.|+||||+.| ++..++.+|.||+++|.|| +|+|+||+|||||||+|+.|++.++ +|+ +++++|+|.+
T Consensus 68 G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~~k-e~g---~ltvsVv~~P 135 (394)
T 2vaw_A 68 GLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEVAK-EMG---ILTVAVVTRP 135 (394)
T ss_dssp SSCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHHHH-HHT---CEEEEEEEEC
T ss_pred CCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHHHH-HcC---CcEEEEecCC
Confidence 46999999965 6888999999999999998 5899999999999999999999999 563 5566666555
Q ss_pred CCCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcccccccCCCCccchhhh
Q 014077 157 QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEF 236 (431)
Q Consensus 157 ~~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~n~~l~~~ 236 (431)
...|..+++||+.+++++|.+++|.+|++||++|+++|.+.+.+. ++|+.+|++|++.++++|.++||||.+|.|+.++
T Consensus 136 f~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~v~~it~~ir~pG~iNvD~~dv 214 (394)
T 2vaw_A 136 FPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGISDIIKRPGMINVDFADV 214 (394)
T ss_dssp CGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHH
T ss_pred cccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChH-HHHHHHHHHHHHHHHHHHHHhcCCCcccccHHHH
Confidence 556888999999999999999999999999999999998888876 5899999999999999999999999999999999
Q ss_pred hccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCCCCceeeeeecccccCChhhHHHHHHhh
Q 014077 237 QTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATI 316 (431)
Q Consensus 237 ~~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG~~~~~~~~~~~~~~ 316 (431)
.++|+| |+++++..+.+. ......+++++.|+ .+++.+|+++.++++.+++..|++.+.+++.+.+..+
T Consensus 215 ~t~L~~-~g~a~~g~g~a~---------g~~rv~ea~~~A~~-spLl~~~d~~~ak~~lv~i~~~~dl~~~ev~~a~~~I 283 (394)
T 2vaw_A 215 KTVMSE-MGMAMMGTGCAS---------GPNRAREATEAAIR-NPLLEDVNLQGARGILVNITAGPDLSLGEYSDVGNII 283 (394)
T ss_dssp HHHHTT-TCCBEEEEEEEC---------STTHHHHHHHHHHT-CGGGTTCCTTTCSEEEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHhccC-CCceeEEEEecc---------ccchHHHHHHHHHh-cCccCCCCccccceeEEEEEeCCCCCHHHHHHHHHHH
Confidence 999999 777777665442 11358889999888 5566679999999999999999999999999998888
Q ss_pred hccCccccccCCCCCCceeecCCCCccCCCCCcccccceEEEecc
Q 014077 317 KTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN 361 (431)
Q Consensus 317 ~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N 361 (431)
+.+... +.+++++.+..++... +..+|+|+.
T Consensus 284 ~~~~~~------~a~i~~G~~~d~~~~~--------~v~VtvIat 314 (394)
T 2vaw_A 284 EQFASE------HATVKVGTVIDADMRD--------ELHVTVVAT 314 (394)
T ss_dssp HHHSCT------TSEEEEEEEECSSCCS--------CEEEEEEEE
T ss_pred HHhcCC------CCCEEEEeecCCCCCC--------eEEEEEEEc
Confidence 765321 4567777776665421 456666664
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=6.2e-43 Score=347.09 Aligned_cols=286 Identities=15% Similarity=0.187 Sum_probs=238.5
Q ss_pred ccEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCccccccC-----
Q 014077 2 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISG----- 76 (431)
Q Consensus 2 ~eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~~~~----- 76 (431)
.+|.+|++|||||++++++|+ |++. -.+.|++|+|.+.++.+.. |+.+..|
T Consensus 12 ~~I~vIGvGg~G~navn~m~~-----~gi~-----------gv~fia~NTD~q~L~~~~a--------~~ki~iG~~~t~ 67 (382)
T 2vxy_A 12 ASIKVIGVGGGGNNAVNRMIE-----NEVQ-----------GVEYIAVNTDAQALNLSKA--------EVKMQIGAKLTR 67 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC-----------SCEEEEEESBHHHHHTCCC--------SEEEECCHHHHT
T ss_pred CEEEEEeeCchHHHHHHHHHH-----hCCC-----------CCCEEEEeCCHHHHhcCCC--------CcEEEecccccC
Confidence 469999999999999999996 5543 1678999999988876643 3344443
Q ss_pred cccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCC
Q 014077 77 KEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSP 156 (431)
Q Consensus 77 ~~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~ 156 (431)
+.|+||||+.| +++.++.+|.||+++|.|| +|+|+||+|||||||+|+.|++.+++ |+ +++++|+|.+
T Consensus 68 G~GAGnn~a~G-----~e~aee~~d~Ir~~le~~D---~ffI~asmGGGTGSG~apvla~~ake-~g---~ltvsVvt~P 135 (382)
T 2vxy_A 68 GLGAGANPEVG-----KKAAEESKEQIEEALKGAD---MVFVTAGMGGGTGTGAAPVIAQIAKD-LG---ALTVGVVTRP 135 (382)
T ss_dssp TBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEESSSSHHHHHHHHHHHHHHH-TT---CEEEEEEEEC
T ss_pred CCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeccCCCCCCcHHHHHHHHHHH-hC---CCeEEEEeCC
Confidence 46999999965 6889999999999999998 58999999999999999999998876 74 5566666665
Q ss_pred CCCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcccccccCCCCccchhhh
Q 014077 157 QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEF 236 (431)
Q Consensus 157 ~~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~n~~l~~~ 236 (431)
...|..+++||+.+++++|.+++|.+|++||++|+++|.+.+++. ++|+++|++|++.++++|.++||||.+|.|+.++
T Consensus 136 f~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~vsgIt~~ir~pG~iNvD~~dv 214 (382)
T 2vxy_A 136 FTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPML-EAFREADNVLRQGVQGISDLIATPGLINLDFADV 214 (382)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHH-HHHHHHHHHHHHHHHHHHTTTSSCCTTCCCHHHH
T ss_pred cccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHHHHHHHcCCCccccCHHHH
Confidence 557889999999999999999999999999999999998888876 5899999999999999999999999999999999
Q ss_pred hccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCCCCceeeeeecccccCChhhHHHHHHhh
Q 014077 237 QTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATI 316 (431)
Q Consensus 237 ~~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG~~~~~~~~~~~~~~ 316 (431)
.++|+| |+++++..+++.- .....+++++.++ +++..|+++.++|+.+.+..+++.+.+++.+++..+
T Consensus 215 ~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~i~gg~dl~~~ev~~a~~~I 282 (382)
T 2vxy_A 215 KTIMSN-KGSALMGIGIATG---------ENRAAEAAKKAIS--SPLLEAAIDGAQGVLMNITGGTNLSLYEVQEAADIV 282 (382)
T ss_dssp HHHTTC-SSEEEEEEEEEES---------TTHHHHHHHHHHT--CTTSCSCGGGCSEEEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHhccC-CCceEEEEEeccc---------ccHHHHHHHHHHh--CcCcCCChhhcceeEEEEEeCCCCCHHHHHHHHHHH
Confidence 999999 9999888765531 1346788888885 467789999999997766666689999999998888
Q ss_pred hccCccccccCCCCCCceeecCCCCc
Q 014077 317 KTKRTIQFVDWCPTGFKCGINYQPPT 342 (431)
Q Consensus 317 ~~~~~~~f~~w~p~~~~~~~~~~~~~ 342 (431)
+.+.. .+.+++.+.+..++.
T Consensus 283 ~~~~~------~~a~ii~G~~~d~~~ 302 (382)
T 2vxy_A 283 ASASD------QDVNMIFGSVINENL 302 (382)
T ss_dssp HHHSC------TTCEEEEEEEECTTC
T ss_pred HHhcC------CCCCEEEEeecCCCC
Confidence 76543 255677777766543
No 13
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=100.00 E-value=7.2e-38 Score=309.57 Aligned_cols=272 Identities=14% Similarity=0.109 Sum_probs=215.1
Q ss_pred EEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCcccc-ccCcccccC
Q 014077 4 CISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQL-ISGKEDAAN 82 (431)
Q Consensus 4 ii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~-~~~~~g~gn 82 (431)
|.+|++||+|+.|.+++.+ +++. +..+.||+|+||+++.+++.++..+. ++.+ +.++.|+|+
T Consensus 45 i~VIGvGg~G~n~v~~m~~-----~~~~-------~g~~~~~~iavNtd~~dl~~L~~~~~-----~~~i~l~G~~GAG~ 107 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAG-----YKFS-------NGTTCYPTLAVNFAESDMMHLQNIIK-----EDRIHFDGLKGAAR 107 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTT-----CBCT-------TSCBSCCEEEEESSGGGGTTCSSSCG-----GGEEEC--------
T ss_pred EEEEEECCcHHHHHHHHHH-----hCcc-------cCCcCceEEEEECCHHHHHHHhcCCC-----cceEEecCCCCCCC
Confidence 7789999999999999863 2221 12378999999999999998876653 4454 567899999
Q ss_pred Cccccccccc-----hhH--HHHHHHHHHhhhh---hcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEE
Q 014077 83 NFARGHYTIG-----KEI--VDLCLDRIRKLAD---NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTV 152 (431)
Q Consensus 83 n~a~G~~~~g-----~~~--~~~~~d~ir~~~E---~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v 152 (431)
||+.|++..| .+. .+++++.||+.+| .||.+|+|+|+||+|||||||+|+.|++.|+++||+++++++++
T Consensus 108 np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~la~~lke~~~~~~~~~vvt 187 (427)
T 3m89_A 108 TPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQLIREQFFPCPVSMLIS 187 (427)
T ss_dssp ---CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHHHHHHHHTTCSSSCEEEEEE
T ss_pred CHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999998874 544 9999999999999 88999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCccchhhHHHHHHHhhh---c------------cCceeEEecChhhHHhhhhcCC--CC---CCCch-hhhHH
Q 014077 153 YPSPQVSTSVVEPYNSVLSTHSLL---E------------HTDVAVLLDNEAIYDICRRSLD--IE---RPTYT-NLNRL 211 (431)
Q Consensus 153 ~P~~~~~~~~~~~yN~~lsl~~l~---~------------~~d~~i~~~N~~l~~~~~~~~~--~~---~~~~~-~~N~~ 211 (431)
+|+... .++||++++++.|. + ++|.+|++||+++..++.+... .. .++|+ .+|++
T Consensus 188 ~P~~~e----~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~i~~~~~~~~~~~~~~~af~~~aN~~ 263 (427)
T 3m89_A 188 LPSGDP----DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQKGTKDLKNRYVNWKEVANDN 263 (427)
T ss_dssp ECCSCH----HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHSSCSSSCCCSCSCHHHHHHHH
T ss_pred ECCCCc----cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHHHHhhccccccccchhhHHHHHHHHH
Confidence 998642 34699999999974 4 9999999999998777654332 12 34999 89999
Q ss_pred HHHHHhhccccc-c-cCCCCccchhhhhccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCC
Q 014077 212 VSQVISSLTASL-R-FDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPR 289 (431)
Q Consensus 212 ia~~i~~~t~~~-r-~~~~~n~~l~~~~~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 289 (431)
|++.|.+++... + +||.+|.|+.++.+.|.|.|. |++.++++...... ..+.++++..+++.+++..|++.
T Consensus 264 Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G--~a~iG~a~~~~~d~-----~~~~~ai~~al~~~~Ll~~~d~~ 336 (427)
T 3m89_A 264 VVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGR--FLTIGKARIAKFDL-----HSLENSIKRSLDEGFFSAEHQFE 336 (427)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCS--EEEEEEEEECSCSH-----HHHHHHHHHHHHSSTTCSCCCGG
T ss_pred HHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCC--eEEEEEecccccch-----hhHHHHHHHHHhCCCcccccCcc
Confidence 999999998854 4 799999999999999999997 66677777654321 24667888888888888999999
Q ss_pred CCceeeeeeccccc
Q 014077 290 HGKYMACCLMYRGD 303 (431)
Q Consensus 290 ~~~~ls~~~i~RG~ 303 (431)
.+++++..++..-+
T Consensus 337 ~Ak~~lv~i~g~~~ 350 (427)
T 3m89_A 337 TATMYGGFVLRPSN 350 (427)
T ss_dssp GCCEEEEEEEEESS
T ss_pred cccEEEEEEEeCch
Confidence 99999888776443
No 14
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.97 E-value=7.3e-33 Score=271.94 Aligned_cols=267 Identities=14% Similarity=0.215 Sum_probs=206.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCccccccC-----c
Q 014077 3 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISG-----K 77 (431)
Q Consensus 3 eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~~~~-----~ 77 (431)
-|..|++|++|+.+-.+..+. ++. -...|.+|+|.+.+..... ++.+..| .
T Consensus 19 ~IkVIGVGG~G~NaVn~m~~~-----~~~-----------gvefiaiNTD~qaL~~s~a--------~~ki~lG~~~t~G 74 (396)
T 4dxd_A 19 TLKVIGVGGGGNNAVNRMIDH-----GMN-----------NVEFIAINTDGQALNLSKA--------ESKIQIGEKLTRG 74 (396)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----CCC-----------SEEEEEEESCHHHHHTCCC--------SEEEECCHHHHTT
T ss_pred eEEEEEECCcHHHHHHHHHHh-----CCC-----------CceEEEEECCHHHHhcCCC--------ccEEEcCccccCC
Confidence 477899999999999888652 221 1356999998887765532 2334343 3
Q ss_pred ccccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCCC
Q 014077 78 EDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQ 157 (431)
Q Consensus 78 ~g~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~~ 157 (431)
.|+|+||+.| ++..++.+|+||+.+|.|| +|+|+||+|||||||+++.|++ +..+|+ +++++|+|.+.
T Consensus 75 lGAG~np~vG-----~eaaee~~d~Ir~~le~~D---~ffItagmGGGTGSGaapvIae-iake~g---~LtvsVVt~Pf 142 (396)
T 4dxd_A 75 LGAGANPEIG-----KKAAEESREQIEDAIQGAD---MVFVTSGMGGGTGTGAAPVVAK-IAKEMG---ALTVGVVTRPF 142 (396)
T ss_dssp SCCTTCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHTT---CEEEEEEEECC
T ss_pred CCCCCChHHH-----HHHHHHHHHHHHHHHcCCC---EEEEEeccCCCccccHHHHHHH-HHHhcC---CceEEEEeCCc
Confidence 5899998865 6888999999999999999 4899999999999999998876 556675 57888877666
Q ss_pred CCCccchhhHHHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcccccccCCCCccchhhhh
Q 014077 158 VSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQ 237 (431)
Q Consensus 158 ~~~~~~~~yN~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~n~~l~~~~ 237 (431)
..+..+++||++++++.|.+++|++|++||++|+++|.+.+.+.. +|..+|++|++.++++|.++||||.+|.|+.++.
T Consensus 143 ~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~~-af~~aN~ll~q~VsgIT~~irfpG~iNvDfaDv~ 221 (396)
T 4dxd_A 143 SFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMME-AFKEADNVLRQGVQGISDLIAVSGEVNLDFADVK 221 (396)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHHH-HHHHHHHHHHHHHHHHHHHHHSCCTBCCCHHHHH
T ss_pred cccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHHH-HHHHHHHHHHHHHHhhhhhhccCCcccCCHHHHH
Confidence 678899999999999999999999999999999999988877764 9999999999999999999999999999999999
Q ss_pred ccCCCCCcccccccccccccccccccccccCHHHHHHHhcCCCCCCcccCCCCCceeeeeecccccCChhhHHHHHHhhh
Q 014077 238 TNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIK 317 (431)
Q Consensus 238 ~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~i~RG~~~~~~~~~~~~~~~ 317 (431)
++|.+. ...++..+.++-.. ...+..+..+ .+++...+....+.+-..+....+....++.+....++
T Consensus 222 t~m~~~-G~A~mG~G~a~G~~---------ra~~A~~~Ai--~sPLL~~~i~gAkgvLvnItgg~dl~l~Ev~~~~~~i~ 289 (396)
T 4dxd_A 222 TIMSNQ-GSALMGIGVSSGEN---------RAVEAAKKAI--SSPLLETSIVGAQGVLMNITGGESLSLFEAQEAADIVQ 289 (396)
T ss_dssp HHHTTC-EECEEEEEEEESTT---------HHHHHHHHHH--CCSSCSSCSTTCCEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHhhcC-CeEEEEEEeccCCc---------hHHHHHHHHH--hCccccCChhhhcceEEEEEcCCCCCHHHHHHHHHHHH
Confidence 999987 45666555544321 1333333333 23454555555565555555556788888888766655
Q ss_pred c
Q 014077 318 T 318 (431)
Q Consensus 318 ~ 318 (431)
.
T Consensus 290 ~ 290 (396)
T 4dxd_A 290 D 290 (396)
T ss_dssp H
T ss_pred H
Confidence 3
No 15
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.97 E-value=5.3e-32 Score=263.23 Aligned_cols=196 Identities=16% Similarity=0.201 Sum_probs=162.6
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCccccccCcccccC
Q 014077 3 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAAN 82 (431)
Q Consensus 3 eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~~~~~~g~gn 82 (431)
-|..|++|++|+.+.+++.+. +. .-..|+++++.+.+..+...+ .+-.+....|+|+
T Consensus 6 kI~VIGvGGaG~Nav~~m~~~-----~~------------~v~~iaiNTD~q~L~~~~~~~------~ki~ig~GlGAG~ 62 (360)
T 3v3t_A 6 KIVFAPIGQGGGNIVDTLLGI-----CG------------DYNALFINTSKKDLDSLKHAK------HTYHIPYAEGCGK 62 (360)
T ss_dssp GEEEEEBSHHHHHHHHHHHHH-----CT------------TSEECEEESCHHHHHTCSSCS------CEEECC------C
T ss_pred eEEEEEeCCcHHHHHHHHHHc-----CC------------CceEEEEECCHHHHhhCCCCc------cEEEcCCCCCCCC
Confidence 378999999999999999751 11 035689999988887654321 1122344579999
Q ss_pred CccccccccchhHHHHHH-HHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCCCCCCc
Q 014077 83 NFARGHYTIGKEIVDLCL-DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 161 (431)
Q Consensus 83 n~a~G~~~~g~~~~~~~~-d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~~~~~~ 161 (431)
||+.| ++..++.. |.||+.+|+|+.+|||+++||+|||||||+++.|++.|+++||++++.+++|+|++. +.
T Consensus 63 np~vG-----~eaaee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k~v~~vtV~Pf~~--Eg 135 (360)
T 3v3t_A 63 ERKKA-----VGYAQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPNKHFGFVGVLPKAT--ED 135 (360)
T ss_dssp CHHHH-----HHHHGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTSEEEEEEEECCTT--SC
T ss_pred CHHHH-----HHHHHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCCCeEEEEEEeCCCc--cc
Confidence 99886 57778888 899999999999999999999999999999999999999999999999999999975 56
Q ss_pred cchhhHHHHHHHhhhc---cCcee--EEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcccccccCCCCccchhhh
Q 014077 162 VVEPYNSVLSTHSLLE---HTDVA--VLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEF 236 (431)
Q Consensus 162 ~~~~yN~~lsl~~l~~---~~d~~--i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~~r~~~~~n~~l~~~ 236 (431)
++++||+++++++|.+ ++|.+ |++||++ .++|.++|++|+++++++|..+|+||.+|.|+.++
T Consensus 136 vv~pyNA~l~l~~L~e~sD~vD~lcvividNea------------~~ay~~lN~lIaq~vs~lt~~l~~~G~iNVDfaDv 203 (360)
T 3v3t_A 136 IDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK------------REKESDINKEFATLFNDFMNMSESHAEGVVDEDEI 203 (360)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG------------SSSHHHHHHHHHHHHHHHHGGGSCCSSCCCCHHHH
T ss_pred hhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC------------chhHHHHHHHHHHHHHHHHHhhccCCceeeeHHHH
Confidence 8999999999999999 55555 9999997 56899999999999999999999999999999998
Q ss_pred hccC
Q 014077 237 QTNL 240 (431)
Q Consensus 237 ~~~L 240 (431)
.+-+
T Consensus 204 ~tvm 207 (360)
T 3v3t_A 204 SKLL 207 (360)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5433
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=99.81 E-value=5.5e-20 Score=183.80 Aligned_cols=345 Identities=12% Similarity=0.070 Sum_probs=204.2
Q ss_pred EEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCccccccCc--cccc
Q 014077 4 CISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGK--EDAA 81 (431)
Q Consensus 4 ii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~~~~~--~g~g 81 (431)
|..|++||||++|.+.|.+ +.... ....+..++|+|+++.+.+..+... ........+... .|+|
T Consensus 18 i~vIGvGgaG~~ivd~~~~-----~~~~~-----~~~~~~~~~iaiNTd~~~L~~~~~~---~~~~~g~~~~~g~g~GaG 84 (389)
T 4ei7_A 18 FGFLGLGMGGCAIAAECAN-----KETQI-----KNNKYPYRAILVNTNSQDFNKIEIK---NTGNVRKIQLEGYEQGAA 84 (389)
T ss_dssp EEEEEEHHHHHHHHHHHHT-----CCCCC-----TTCSCCCEEEEEECCCHHHHHSCCC---SCSSEEEEECTTCCCTTC
T ss_pred EEEEEECCchHHHHHHHHh-----ccccc-----ccccccccEEEEECCHHHHhhccCc---chhhhhhhccCCCCCCCC
Confidence 7789999999999999963 11111 1112446899999999888765431 112222223322 4999
Q ss_pred CCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCCCCCCc
Q 014077 82 NNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 161 (431)
Q Consensus 82 nn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~~~~~~ 161 (431)
+||..|+ ...++..+++.+.|+..++.+|. ++|++++|||||+|.++.+++.+++. ..+++.++++|+.. |.
T Consensus 85 ~~p~~G~-~aa~e~~~~i~~~l~~~~~~~d~---vfi~ag~GGGTGtGa~pvia~~~ke~--~~~~~~vvt~Pf~~--Eg 156 (389)
T 4ei7_A 85 RNPQVGE-EAFVKHETKIFEAVKQEFEDRDF---IWITCGLGGGTGTGALLKAIEMLYEH--DYNFGLLLTLPRDA--EA 156 (389)
T ss_dssp CCHHHHH-HHHHHTHHHHHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHHT--TCCEEEEEEECCGG--GH
T ss_pred CChHHHH-HHHHHHHHHHHHHHHhhcCCccE---EEEEecCCCCCccccHHHHHHHHHHc--CCCEEEEEEeCCCc--Cc
Confidence 9998886 34566677777777777777774 59999999999999999999999985 45677788889864 44
Q ss_pred cchhhHHHHHHHhh---hccCceeEEecChhhHHhhhhcCC--CCCCCchhhhHHHHHHHhhcccccc---cCCCCccch
Q 014077 162 VVEPYNSVLSTHSL---LEHTDVAVLLDNEAIYDICRRSLD--IERPTYTNLNRLVSQVISSLTASLR---FDGALNVDV 233 (431)
Q Consensus 162 ~~~~yN~~lsl~~l---~~~~d~~i~~~N~~l~~~~~~~~~--~~~~~~~~~N~~ia~~i~~~t~~~r---~~~~~n~~l 233 (431)
..+..|+.-++..| .+.+|.+|++||+.|.++.....+ .-...|+..|++|++.+..++.... .+|..|.|+
T Consensus 157 ~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~~~~af~~an~~l~~~v~~i~~~~~~~~~~g~in~D~ 236 (389)
T 4ei7_A 157 LKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANEYTSYSNKYIADALHEINLVTSSFTPFSDTHFDA 236 (389)
T ss_dssp HHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCCGGGHHHHHHHHHHHHHHHHHHHTTSSEESSSCCCCH
T ss_pred hHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeeH
Confidence 45555666666666 677999999999999988754321 1124688999999998777654333 348899999
Q ss_pred hhhhccCCCCCcccccccccccccccccccccccCHHH-HHHHhcCCC-CCCcccCCCCCceeeeeecccccC------C
Q 014077 234 TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAE-ITNSAFEPS-SMMAKCDPRHGKYMACCLMYRGDV------V 305 (431)
Q Consensus 234 ~~~~~~L~p~p~~~fl~~~~~pl~~~~~~~~~~~~~~~-l~~~~~~~~-~~~~~~~~~~~~~ls~~~i~RG~~------~ 305 (431)
.++.+-|.... +...+++................+ +.+.+-++- +....++....+... ..|.-|.. .
T Consensus 237 aDv~~vm~~~G---~a~~G~~~~~~~~~~~~~~~~~~~a~~~ai~~~ll~~~~~~~i~~A~~~l-l~I~~~~~~~~~~~~ 312 (389)
T 4ei7_A 237 SEFAQVINTPG---VLSLAKLELKSNQLDTENPLGYLTQLGNALEKGVLYDTEREELESAKKSA-LSIVTSPLRAGRLYN 312 (389)
T ss_dssp HHHHHHHTSSE---EEEEEEEEEEGGGCCTTSTHHHHHHHHHHHHBCSSSBCCHHHHTTCSEEE-EEEEECHHHHHHHSS
T ss_pred HHHHHHhcCCC---EEEEEeeeccccccccccchHHHHHHHHHHhccccccccccChhhhheEE-EEEEcCcccchhhhh
Confidence 99887664333 222233322111100111111112 222221111 001112222223222 22222311 1
Q ss_pred hhhHHHHHHhhhccCccccccCCCCCCceeecCCCCccCCCCCcccccceEEEeccCcchHHHHHHHHHHHHHHhccc
Q 014077 306 PKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKR 383 (431)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~N~t~i~~~l~~l~~~~~~~~~~k 383 (431)
...+.+....+ ..+..|.+......+....+... ......++++.++......+.++.+++.++..++
T Consensus 313 ~~~~~~~~~~i-----~~~~~~~~~~~~~i~~g~~~~~~-----~~~~V~v~viatG~~~~~~~~~~~~~~~~~~e~~ 380 (389)
T 4ei7_A 313 FSFLNQMENFL-----KERTPYVDERPIAPYVNKHTTKK-----EEDIVKFYSVVAGLPLPKRVSDIIDEITRIKEER 380 (389)
T ss_dssp HHHHHHHHHHH-----HHHSTTCSCCCEEEEECTTCCGG-----GTTEEEEEEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----HhhccccCcccceEEecCCCCcC-----CCCeEEEEEEEecCCchHhHHHHHHHHHHHHHHH
Confidence 11111111111 12445666544444433322211 1114567888888888888888888888877655
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=99.44 E-value=6.7e-14 Score=131.16 Aligned_cols=173 Identities=18% Similarity=0.216 Sum_probs=123.4
Q ss_pred Cc-cEEEEecCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcccceeeecCCCCccccccccccccccCccccccCccc
Q 014077 1 MR-ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKED 79 (431)
Q Consensus 1 M~-eii~iq~Gq~Gn~Ig~~fw~~~~~e~~~~~~~~~~~~~~~~pR~ilvD~e~~~i~~i~~~~~~~~~~~~~~~~~~~g 79 (431)
|. .|..+++|++|+.|.+.+++ + -+.+|.||++.+.+...+ .. ....+..+..|
T Consensus 1 ~~vki~VvGvGGAG~Nii~rL~~----~---------------Ga~~iAiNTD~q~L~~~k--~~----~~~~i~~gglG 55 (315)
T 3r4v_A 1 MPVKVCLIFAGGTGMNVATKLVD----L---------------GEAVHCFDTCDKNVVDVH--RS----VNVTLTKGTRG 55 (315)
T ss_dssp -CBSCEEEEEHHHHHHHHGGGGG----G---------------GGGEEEEESSSTTCCGGG--GG----SEEEECTTCCC
T ss_pred CCceEEEEEEcCcchHHHHHHHH----c---------------CCCEEEEECchHHhhhhh--hh----cceeeecccCC
Confidence 44 67889999999999999875 1 157899999988774431 11 11122344456
Q ss_pred ccCCccccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCCCCC
Q 014077 80 AANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVS 159 (431)
Q Consensus 80 ~gnn~a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~~~~ 159 (431)
+|++ ...|.+..++..+.|++.++.+|-+ +|+++||||||+|.++.+++.+++. ...++++++.|.+
T Consensus 56 AGgd-----pe~g~e~a~e~~~eI~~~l~~aD~V---FVtaGLGGGTGTGaAPVvAeiake~--GalvVavVt~~~E--- 122 (315)
T 3r4v_A 56 AGGN-----RKVILPLVRPQIPALMDTIPEADFY---IVCYSLGGGSGSVLGPLITGQLADR--KASFVSFVVGAME--- 122 (315)
T ss_dssp ---C-----HHHHHHHHGGGHHHHHHTSCCBSCE---EEEEESSSSSHHHHHHHHHHHHHHT--TCCEEEEEEECCS---
T ss_pred CCCC-----hHHHHHHHHhhHHHHHHhcCCCCEE---EEEeccCCccccchHHHHHHHHHHc--CCCEEEEEecCCC---
Confidence 6666 4556677777777888888887754 9999999999999999999999998 2367777777732
Q ss_pred CccchhhH---HHHHHHhhhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhccc
Q 014077 160 TSVVEPYN---SVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 221 (431)
Q Consensus 160 ~~~~~~yN---~~lsl~~l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~ 221 (431)
..+..-| |+-+|..|.+.+|.+|+|+ +.+. .+...++.+|+.++..+..+..
T Consensus 123 -~~~~~~Nai~al~~LE~La~~~dt~Iv~d---~Len------~~~lp~~~lN~eia~rL~al~~ 177 (315)
T 3r4v_A 123 -STDNLGNDIDTMKTLEAIAVNKHLPIVVN---YVPN------TQGRSYESINDEIAEKIRKVVL 177 (315)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHTSCEEEE---EEEC------CTTCCHHHHHHHHHHHHHHHHH
T ss_pred -cchhhhchHHHHHHHHHHHhccCCcEEEe---cccc------CCCCchHHHHHHHHHHHHHHHH
Confidence 2233445 6788999999999999998 2111 2455779999999998877644
No 18
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=97.30 E-value=0.00019 Score=46.01 Aligned_cols=27 Identities=85% Similarity=1.255 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCCCC
Q 014077 397 GEFSEAREDLAALEKDYEEVGAESAEG 423 (431)
Q Consensus 397 ~eF~Ea~~~l~~l~~~Y~~~~~~~~~~ 423 (431)
++|.||+++|.+|+.+|++++.+..++
T Consensus 1 ~EFsEA~edl~~L~~dYee~~~~~~e~ 27 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEEVGVDSVEG 27 (36)
T ss_pred CcchHHHHHHHHHHHHHHHHhcccccc
Confidence 589999999999999999998765543
No 19
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=72.62 E-value=5.8 Score=32.68 Aligned_cols=31 Identities=13% Similarity=0.256 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhhhhcCCCcceEEEeeCCCCc
Q 014077 96 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGT 126 (431)
Q Consensus 96 ~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGt 126 (431)
.+++.++++..+++.|.-+|++++.++-|||
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGS 71 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGS 71 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCC
Confidence 3567788888899988888999999998886
No 20
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=71.51 E-value=2.7 Score=35.05 Aligned_cols=30 Identities=17% Similarity=0.257 Sum_probs=26.2
Q ss_pred HHHHHHHHHhhhhhcCCCcceEEEeeCCCCc
Q 014077 96 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGT 126 (431)
Q Consensus 96 ~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGt 126 (431)
.+++.++++..+++.|. +|++|+.++-|||
T Consensus 45 ~~~~~~~i~~~i~~~~~-~gvliLtDl~GGS 74 (142)
T 3bed_A 45 LSGTQAKLAAILKEAGN-VPTLVLADLXGGT 74 (142)
T ss_dssp HHHHHHHHHHHHHHHCS-CCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEEECCCCH
Confidence 45677888899999998 9999999998887
No 21
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=61.67 E-value=5.3 Score=33.45 Aligned_cols=39 Identities=8% Similarity=0.200 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhhhhc-CCCcceEEEeeCCCCcccCchHHH
Q 014077 96 VDLCLDRIRKLADNC-TGLQGFLVFNAVGGGTGSGLGSLL 134 (431)
Q Consensus 96 ~~~~~d~ir~~~E~c-D~lqgf~~~~sl~GGtGSG~gs~l 134 (431)
.+++.++++..+++. |.=+|++++.++.|||=.-.+..+
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l 82 (144)
T 3lfh_A 43 IEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSM 82 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHH
Confidence 356777788888888 778899999999998743333333
No 22
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=55.71 E-value=8.2 Score=32.46 Aligned_cols=39 Identities=18% Similarity=0.166 Sum_probs=29.2
Q ss_pred HHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHH
Q 014077 96 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 134 (431)
Q Consensus 96 ~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l 134 (431)
.+.+.++++..+++.|.-+|++++.++-|||=.-.+..+
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~~~ 79 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLV 79 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 456677888888888888899999999998743333333
No 23
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=55.15 E-value=15 Score=30.04 Aligned_cols=40 Identities=18% Similarity=0.427 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHH
Q 014077 95 IVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 136 (431)
Q Consensus 95 ~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e 136 (431)
-.+++.++++..+++.|.-+|++++.++ ||=+-++..+.+
T Consensus 43 ~~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l~~ 82 (130)
T 3gx1_A 43 EVKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILTE 82 (130)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 3567888999999999999999999999 554555554443
No 24
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=52.34 E-value=6 Score=33.76 Aligned_cols=31 Identities=10% Similarity=0.118 Sum_probs=26.1
Q ss_pred HHHHHHHHhhhhhcCCCcceEEEeeCCCCcc
Q 014077 97 DLCLDRIRKLADNCTGLQGFLVFNAVGGGTG 127 (431)
Q Consensus 97 ~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtG 127 (431)
+++.++++..+++.|.-+|++|+.++.|||=
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGSP 91 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGSV 91 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCH
Confidence 3566778888888888899999999999983
No 25
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=45.02 E-value=78 Score=27.23 Aligned_cols=110 Identities=11% Similarity=0.035 Sum_probs=59.6
Q ss_pred HHHHHHHHhhhhh-cCCCcce-EEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCCCCCCccchhhHHHHHHHh
Q 014077 97 DLCLDRIRKLADN-CTGLQGF-LVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS 174 (431)
Q Consensus 97 ~~~~d~ir~~~E~-cD~lqgf-~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~ 174 (431)
..+...|++.+++ .+ +|+ -++.+.+.|+- -+++.++-.|+.+||+.. -.+|+|+...+... .+-|. ..+..
T Consensus 26 ~~ik~~L~~~l~~l~~--~G~~~~isgga~G~D-~~aae~vl~lk~~y~~i~--L~~v~Pf~~~~~~w-~~~~~-~~y~~ 98 (181)
T 2nx2_A 26 YYIKKAIKNRLIAFLD--EGLEWILISGQLGVE-LWAAEAAYDLQEEYPDLK--VAVITPFYEQEKNW-KEPNK-EQYEA 98 (181)
T ss_dssp HHHHHHHHHHHHHHHT--TTCCEEEECCCTTHH-HHHHHHHHTTTTTCTTCE--EEEEESSBCTTTTS-CHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHh--CCCcEEEECCCccHH-HHHHHHHHHhccccCCce--EEEEecccchhhCC-CHHHH-HHHHH
Confidence 3444444444443 22 253 45666656554 356666666788898444 35577876543322 22233 35677
Q ss_pred hhccCceeEEecChhhHHhhhhcCCCCCCCchhhhHHHHHHHhhcccc
Q 014077 175 LLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTAS 222 (431)
Q Consensus 175 l~~~~d~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~~ia~~i~~~t~~ 222 (431)
+.+.||.+..+...... ....|..-|+.+...-..+.+-
T Consensus 99 ll~~aD~v~~l~~~~y~---------~~~~~~~rn~~mvd~sD~liav 137 (181)
T 2nx2_A 99 VLAQADYEASLTHRPYE---------SPLQFKQKNQFFIDKSDGLLLL 137 (181)
T ss_dssp HHHHCSEEEESSSSBCC---------CHHHHHHHHHHHHHHSSEEEEE
T ss_pred HHHhCCeEEecccCCCC---------CHHHHHHHHHHHHHHCCEEEEE
Confidence 77788888877543210 0112456677766665555443
No 26
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=44.69 E-value=17 Score=33.47 Aligned_cols=61 Identities=20% Similarity=0.216 Sum_probs=41.0
Q ss_pred cccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeE
Q 014077 85 ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 149 (431)
Q Consensus 85 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~ 149 (431)
..|++..-..+.+.+.+.|++.+++.....=++.=||||| +++....-.|+..+|...+..
T Consensus 96 H~GF~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~v~~ 156 (258)
T 3g7n_A 96 MRGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGG----ALTSIAHVALAQNFPDKSLVS 156 (258)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHH----HHHHHHHHHHHHHCTTSCEEE
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHH----HHHHHHHHHHHHhCCCCceeE
Confidence 3455444445666777778887777655555677899955 477777777888888765543
No 27
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=41.12 E-value=27 Score=28.82 Aligned_cols=40 Identities=20% Similarity=0.360 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhhhhh--cCCCcceEEEeeCCCCcccCchHHHHH
Q 014077 95 IVDLCLDRIRKLADN--CTGLQGFLVFNAVGGGTGSGLGSLLLE 136 (431)
Q Consensus 95 ~~~~~~d~ir~~~E~--cD~lqgf~~~~sl~GGtGSG~gs~l~e 136 (431)
-.+++.++++..+++ .|.-+|++++.++ ||=+-++..+.+
T Consensus 43 ~~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a~~l~~ 84 (139)
T 3gdw_A 43 EVQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNMLFE 84 (139)
T ss_dssp CHHHHHHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 346778888888888 7788999999999 554455554443
No 28
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=38.90 E-value=15 Score=34.28 Aligned_cols=60 Identities=10% Similarity=0.131 Sum_probs=38.7
Q ss_pred cccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCccee
Q 014077 85 ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 148 (431)
Q Consensus 85 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~ 148 (431)
..|++..-....+.+.+.|++.+++.....=++.=||||| +++..++-.|+..+|...+-
T Consensus 110 H~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGG----alA~l~a~~l~~~~~~~~~~ 169 (279)
T 3uue_A 110 MHGFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGA----AMGLLCAMDIELRMDGGLYK 169 (279)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHH----HHHHHHHHHHHHHSTTCCSE
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHH----HHHHHHHHHHHHhCCCCceE
Confidence 3454443345566677777777777655555667799955 46777777777777754433
No 29
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=38.39 E-value=11 Score=35.13 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=27.4
Q ss_pred HHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHH
Q 014077 96 VDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLER 137 (431)
Q Consensus 96 ~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~ 137 (431)
.+++++++|+.+++=..+ +|+|.|+|++++..|.
T Consensus 13 r~~il~~l~~~i~~~~~i--------ig~gaGtGlsAk~~e~ 46 (286)
T 2p10_A 13 RSELVDRFQKKIRAGEPI--------IGGGAGTGLSAKSEEA 46 (286)
T ss_dssp HHHHHHHHHHHHHTTCCE--------EEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCce--------EEEecccchhhHHHHh
Confidence 467899999999876655 6778899999998765
No 30
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=38.01 E-value=12 Score=30.70 Aligned_cols=27 Identities=19% Similarity=0.308 Sum_probs=21.1
Q ss_pred HHHHHHhhhhhcCCCcceEEEeeCCCCc
Q 014077 99 CLDRIRKLADNCTGLQGFLVFNAVGGGT 126 (431)
Q Consensus 99 ~~d~ir~~~E~cD~lqgf~~~~sl~GGt 126 (431)
..++|+..+++.|.=+|++++.++ |||
T Consensus 50 ~~~~i~~ai~~~~~~dgVlvltDL-Ggs 76 (135)
T 3b48_A 50 DPMKIIDTINEADSDREFLIFADL-GSA 76 (135)
T ss_dssp CHHHHHHHHHHSCSSCEEEEEECS-HHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeC-CCC
Confidence 345677777777777899999999 665
No 31
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=36.10 E-value=19 Score=29.43 Aligned_cols=26 Identities=19% Similarity=0.418 Sum_probs=19.7
Q ss_pred HHHHHHhhhhhcCCCcceEEEeeCCCCc
Q 014077 99 CLDRIRKLADNCTGLQGFLVFNAVGGGT 126 (431)
Q Consensus 99 ~~d~ir~~~E~cD~lqgf~~~~sl~GGt 126 (431)
..++|+..+++.| =+|++++.++ |||
T Consensus 45 ~~~~i~~ai~~~~-~dgVlvltDL-Ggs 70 (131)
T 3ct6_A 45 SFDRVMNAIEENE-ADNLLTFFDL-GSA 70 (131)
T ss_dssp CHHHHHHHHHHSS-CSEEEEEESS-GGG
T ss_pred HHHHHHHHHHhCC-CCCEEEEEeC-CCC
Confidence 3466777777777 3899999999 654
No 32
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=33.58 E-value=17 Score=28.03 Aligned_cols=53 Identities=26% Similarity=0.541 Sum_probs=37.7
Q ss_pred eccCcchHHHHHHHH-------HHHHHHhccccceeccccCCCCh--hhHHHHHHHHHHHHHHHHHH
Q 014077 359 ISNSTSVAEVFSRID-------HKFDLMYAKRAFVHWYVGEGMEE--GEFSEAREDLAALEKDYEEV 416 (431)
Q Consensus 359 l~N~t~i~~~l~~l~-------~~~~~~~~~kAflh~Y~~~Gmee--~eF~Ea~~~l~~l~~~Y~~~ 416 (431)
++|.++|..+|..|. +.-..+--+|.|. +|+.+ ....||+..|+.|-+++++=
T Consensus 30 i~nDssVQsLF~~lt~MH~~Ll~~i~~~ee~R~~y-----E~LQDkL~qi~eAR~ALdaLR~eH~~K 91 (98)
T 3f1i_H 30 ITNDSAVLSLFQSINGMHPQLLELLNQLDERRLYY-----EGLQDKLAQIRDARGALSALREEHREK 91 (98)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678888888877654 4444455556444 67744 58999999999999999743
No 33
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=30.00 E-value=28 Score=32.70 Aligned_cols=61 Identities=11% Similarity=0.078 Sum_probs=37.3
Q ss_pred ccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEE
Q 014077 86 RGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 150 (431)
Q Consensus 86 ~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~ 150 (431)
.|++..-+...+.+.+.|++.+++.....=++.=||||| +++..++-.|+...++..+++|
T Consensus 127 ~GF~~~~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~~~tf 187 (301)
T 3o0d_A 127 NGFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGG----AAALLFGINLKVNGHDPLVVTL 187 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHH----HHHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeccChHH----HHHHHHHHHHHhcCCCceEEee
Confidence 344433345556677777777776554555566789955 4667777777776555444444
No 34
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=29.45 E-value=92 Score=28.34 Aligned_cols=56 Identities=16% Similarity=0.257 Sum_probs=33.5
Q ss_pred HHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecC
Q 014077 99 CLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPS 155 (431)
Q Consensus 99 ~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~ 155 (431)
+.+.+...++.......=.-+-++|.||| .++..++..+...+|...+...+|=|+
T Consensus 36 ~~~~l~~~l~~~~~~~~~~~VLDiG~GtG-~~~~~~l~~l~~~~~~~~v~~~~vD~S 91 (292)
T 2aot_A 36 MDKKLPGIIGRIGDTKSEIKILSIGGGAG-EIDLQILSKVQAQYPGVCINNEVVEPS 91 (292)
T ss_dssp HHHTHHHHSSSTTTTCSEEEEEEETCTTS-HHHHHHHHHHHHHSTTCEEEEEEECSC
T ss_pred HHHhchhHHhhccCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhCCCceeeEEEEeCC
Confidence 33345554554432222246789988887 466678888888887664434566554
No 35
>2ful_A EIF-5, eukaryotic translation initiation factor 5; atypical heat motif; 1.50A {Saccharomyces cerevisiae}
Probab=28.13 E-value=21 Score=30.94 Aligned_cols=49 Identities=6% Similarity=0.021 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHH--HhccccceeccccC---CCChhhHHHHHHHHHHHHHHHHH
Q 014077 367 EVFSRIDHKFDL--MYAKRAFVHWYVGE---GMEEGEFSEAREDLAALEKDYEE 415 (431)
Q Consensus 367 ~~l~~l~~~~~~--~~~~kAflh~Y~~~---Gmee~eF~Ea~~~l~~l~~~Y~~ 415 (431)
..|-.|++.+.. +..-.|++.||.+. ..+......++..+..++.==++
T Consensus 106 ~~~~~IL~~LYd~DIleEeaIl~W~~~~skk~v~~e~~~~v~~~~~pFI~WL~e 159 (177)
T 2ful_A 106 PLLPKILVQLYNNDIISEEEIMRFGTKSSKKFVPKEVSKKVRRAAKPFITWLET 159 (177)
T ss_dssp GGHHHHHHHHHHTTSSCHHHHHHHHHCCCSSSSCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHhccchhhhHHHHHHHhcCCcccCChHHHHHHHHHHHHHHHHHHc
Confidence 445555555533 55678999999763 24544455556655555543333
No 36
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=25.29 E-value=36 Score=31.07 Aligned_cols=51 Identities=16% Similarity=0.162 Sum_probs=32.3
Q ss_pred ccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhh
Q 014077 86 RGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSV 140 (431)
Q Consensus 86 ~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~d 140 (431)
+|++..-..+.+.+.+.|++..++.....=++.=||||| +++..++-.|+.
T Consensus 98 ~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~ 148 (261)
T 1uwc_A 98 GGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGA----SMAALTAAQLSA 148 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHH----HHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHCCCceEEEEecCHHH----HHHHHHHHHHhc
Confidence 444433334556677777777777655555778899965 466666666664
No 37
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Probab=24.40 E-value=36 Score=31.19 Aligned_cols=53 Identities=11% Similarity=0.181 Sum_probs=33.4
Q ss_pred cccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhh
Q 014077 85 ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 141 (431)
Q Consensus 85 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~de 141 (431)
.+|++..-+.+.+++.+.+++..++.....=+++=||||| +++..++..++..
T Consensus 110 h~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGG----alA~l~a~~l~~~ 162 (269)
T 1tib_A 110 HDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGG----ALATVAGADLRGN 162 (269)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHH----HHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEecCChHH----HHHHHHHHHHHhc
Confidence 3455433345566676777777666555566788899944 4666676666654
No 38
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae}
Probab=24.39 E-value=40 Score=32.00 Aligned_cols=62 Identities=15% Similarity=0.135 Sum_probs=37.0
Q ss_pred cccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEE
Q 014077 85 ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 150 (431)
Q Consensus 85 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~ 150 (431)
..|++..-..+.+.+.+.|++.+++.....=++.=||||| +++..+.-.|+...+...+++|
T Consensus 108 H~GF~~a~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGG----AlA~L~a~~l~~~~~~v~~~TF 169 (319)
T 3ngm_A 108 HSGFQNAWNEISAAATAAVAKARKANPSFKVVSVGHSLGG----AVATLAGANLRIGGTPLDIYTY 169 (319)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHH----HHHHHHHHHHHHTTCCCCEEEE
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHhhCCCCceEEeecCHHH----HHHHHHHHHHHhcCCCceeeec
Confidence 3454443345566677777777776655555677899965 4666666666655444444443
No 39
>2iu1_A EIF5, eukaryotic translation initiation factor 5; MFC, GTP-binding, phosphorylation, protein biosynthesis, translation inititation; 1.8A {Homo sapiens}
Probab=23.98 E-value=42 Score=29.79 Aligned_cols=46 Identities=11% Similarity=0.110 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHH--HhccccceeccccCC---CChhhHHHHHHHHHHHHHH
Q 014077 367 EVFSRIDHKFDL--MYAKRAFVHWYVGEG---MEEGEFSEAREDLAALEKD 412 (431)
Q Consensus 367 ~~l~~l~~~~~~--~~~~kAflh~Y~~~G---mee~eF~Ea~~~l~~l~~~ 412 (431)
..|-.|++.+.. +..-.|++.||.+.. .++..-...+..+..++.=
T Consensus 100 ~~~~~IL~~LYD~DIleEEaIl~W~~~~s~~~~~~e~~k~v~~~~~pFI~W 150 (208)
T 2iu1_A 100 SKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFIKW 150 (208)
T ss_dssp GGHHHHHHHHHHTTSSCHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccchhhhHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHH
Confidence 344444444433 446779999997632 2232222445555555533
No 40
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=22.24 E-value=73 Score=29.29 Aligned_cols=53 Identities=13% Similarity=0.201 Sum_probs=34.4
Q ss_pred cccccccchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhh
Q 014077 85 ARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 141 (431)
Q Consensus 85 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~de 141 (431)
.+|++..-..+.+.+.+.|++..++.....=++.=|||||+ ++..++-.++..
T Consensus 109 h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~ 161 (279)
T 1tia_A 109 ELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAA----VATLAATDLRGK 161 (279)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHH----HHHHHHHHHHhc
Confidence 45655444456667777777777776556667888999654 566666666543
No 41
>1k2d_P MBP peptide, myelin basic protein peptide with 8 residue linke; MHC class II, I-AU, H-2U, autoimmune disease; HET: NDG NAG; 2.20A {Mus musculus}
Probab=21.66 E-value=22 Score=19.80 Aligned_cols=8 Identities=88% Similarity=1.298 Sum_probs=4.6
Q ss_pred CcccCchH
Q 014077 125 GTGSGLGS 132 (431)
Q Consensus 125 GtGSG~gs 132 (431)
|+|||.|+
T Consensus 16 g~gsgsgs 23 (26)
T 1k2d_P 16 GTGSGSGS 23 (26)
T ss_pred cCCCCcCc
Confidence 56666554
No 42
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=21.47 E-value=1.3e+02 Score=28.48 Aligned_cols=97 Identities=14% Similarity=0.180 Sum_probs=55.5
Q ss_pred cchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCCCC-CCccchhhHHH
Q 014077 91 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 169 (431)
Q Consensus 91 ~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~~~-~~~~~~~yN~~ 169 (431)
...+.+.++.+.|+..+++ +..+||+|+|+.. | --.++..+..+-+ .++-.+++=+..|.... ++...-.++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--T-meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (332)
T 2wlt_A 65 MNEEIWFKLAQRAQELLDD-SRIQGVVITHGTD--T-LEESAYFLNLVLH-STKPVVLVGAMRNASSLSADGALNLYEAV 139 (332)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCSS--S-HHHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCch--h-HHHHHHHHHHHhC-CCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 4567777777888777654 4688999999873 4 2456667766544 44444556667787653 34444444444
Q ss_pred HHHHhhhccCceeEEecChhhHH
Q 014077 170 LSTHSLLEHTDVAVLLDNEAIYD 192 (431)
Q Consensus 170 lsl~~l~~~~d~~i~~~N~~l~~ 192 (431)
..-..-...--.|+++=|+.++.
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~~ 162 (332)
T 2wlt_A 140 SVAVNEKSANKGVLVVMDDTIFS 162 (332)
T ss_dssp HHHHCGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEee
Confidence 33222110112455555666654
No 43
>3kl4_B DPAP B, YSCV, signal peptide of yeast dipeptidyl aminopeptidase; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Saccharomyces cerevisiae}
Probab=20.87 E-value=15 Score=22.59 Aligned_cols=11 Identities=64% Similarity=1.057 Sum_probs=7.0
Q ss_pred CcccCchHHHH
Q 014077 125 GTGSGLGSLLL 135 (431)
Q Consensus 125 GtGSG~gs~l~ 135 (431)
|.|||.|++++
T Consensus 4 gsgsgsgskli 14 (42)
T 3kl4_B 4 GSGSGSGSKLI 14 (42)
T ss_pred CCCCCCccceE
Confidence 56677776653
No 44
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=20.19 E-value=1.1e+02 Score=29.04 Aligned_cols=97 Identities=11% Similarity=0.123 Sum_probs=55.5
Q ss_pred cchhHHHHHHHHHHhhhhhcCCCcceEEEeeCCCCcccCchHHHHHHhhhhhCCcceeEEEEecCCCC-CCccchhhHHH
Q 014077 91 IGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV-STSVVEPYNSV 169 (431)
Q Consensus 91 ~g~~~~~~~~d~ir~~~E~cD~lqgf~~~~sl~GGtGSG~gs~l~e~l~deyp~~~i~~~~v~P~~~~-~~~~~~~yN~~ 169 (431)
...+.+..+.+.|+..+++ +..+||+|+|+.. | --.++..+..+-+ .++-.+++=+..|.... ++...-.++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--T-meeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (327)
T 1o7j_A 65 MTGDVVLKLSQRVNELLAR-DDVDGVVITHGTD--T-VEESAYFLHLTVK-SDKPVVFVAAMRPATAISADGPMNLLEAV 139 (327)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCST--T-HHHHHHHHHHHCC-CCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCch--h-HHHHHHHHHHHhC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 4567777777888777654 4688999999874 4 2456666766544 44444556667787653 34444444444
Q ss_pred HHHHhhhccCceeEEecChhhHH
Q 014077 170 LSTHSLLEHTDVAVLLDNEAIYD 192 (431)
Q Consensus 170 lsl~~l~~~~d~~i~~~N~~l~~ 192 (431)
..-..-...--.|+++=|+.++.
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~~ 162 (327)
T 1o7j_A 140 RVAGDKQSRGRGVMVVINDRIGS 162 (327)
T ss_dssp HHHHCGGGTTSCCEEEETTEEEE
T ss_pred HHHhCcCCCCCceEEEECCEEee
Confidence 33222110112455555666654
Done!