BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014079
(431 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 175/291 (60%), Gaps = 12/291 (4%)
Query: 70 LFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWL 129
L +LE T +F +++G G FG VYKG + + +V LK E QG E+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRR-------TPESSQGIEEFE 83
Query: 130 TEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK--ATVPLSWATRMM 187
TE+ L RHP+LV LIG+C E + +L+Y++M G+L+ HL+ T+ +SW R+
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
I GAA+GL +LH R +I+RD K+ NILLD ++ K++DFG++K G + D+TH+ V
Sbjct: 144 ICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 248 MGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLN 307
GT GY PEY + G LT +SDVYSFGVVL E+L R ++ ++ P + +L +WA N
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 308 DKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
+ ++ QI+DP L ++ + +K A CL+ + + RP M DV+ LE
Sbjct: 262 NG-QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 174/291 (59%), Gaps = 12/291 (4%)
Query: 70 LFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWL 129
L +LE T +F +++G G FG VYKG + + +V LK E QG E+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRR-------TPESSQGIEEFE 83
Query: 130 TEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK--ATVPLSWATRMM 187
TE+ L RHP+LV LIG+C E + +L+Y++M G+L+ HL+ T+ +SW R+
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
I GAA+GL +LH R +I+RD K+ NILLD ++ K++DFG++K G + +TH+ V
Sbjct: 144 ICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 248 MGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLN 307
GT GY PEY + G LT +SDVYSFGVVL E+L R ++ ++ P + +L +WA N
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN 261
Query: 308 DKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
+ ++ QI+DP L ++ + +K A CL+ + + RP M DV+ LE
Sbjct: 262 NG-QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 172/297 (57%), Gaps = 15/297 (5%)
Query: 68 FSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG-HR 126
FSL EL+ + +F + ILG GGFG VYKG + + V AVK L +E QG
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLV-------AVKRLKEERXQGGEL 80
Query: 127 EWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK--ATVPLSWAT 184
++ TEV + H NL++L G+C RLLVY +M GS+ + L + + PL W
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 185 RMMIAFGAAKGLAFLHNAERP-VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
R IA G+A+GLA+LH+ P +I+RD K +NILLD ++ A + DFGLAK D HV
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHV 199
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQS--LVDW 301
V GT G+ APEY+ TG + ++DV+ +GV+LLEL+TG+++ D R + + L+DW
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 259
Query: 302 ARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
+ L +K K+ ++D L+ Y ++ +A C +P RP MS+VV LE
Sbjct: 260 VKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 171/297 (57%), Gaps = 15/297 (5%)
Query: 68 FSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG-HR 126
FSL EL+ + +F + ILG GGFG VYKG + + V AVK L +E QG
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLV-------AVKRLKEERTQGGEL 72
Query: 127 EWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK--ATVPLSWAT 184
++ TEV + H NL++L G+C RLLVY +M GS+ + L + + PL W
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 185 RMMIAFGAAKGLAFLHNAERP-VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
R IA G+A+GLA+LH+ P +I+RD K +NILLD ++ A + DFGLAK D HV
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHV 191
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQS--LVDW 301
V G G+ APEY+ TG + ++DV+ +GV+LLEL+TG+++ D R + + L+DW
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 302 ARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
+ L +K K+ ++D L+ Y ++ +A C +P RP MS+VV LE
Sbjct: 252 VKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 177/301 (58%), Gaps = 17/301 (5%)
Query: 67 AFSLFELETITKSFRSDYI------LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE 120
+FS +EL+ +T +F I +GEGGFG VYKGY++ N V +K L V + +E
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEE 72
Query: 121 GLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVP 179
Q ++ E+ + + +H NLV+L+G+ + D LVY +M GSL + L T P
Sbjct: 73 LKQ---QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 180 LSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD 239
LSW R IA GAA G+ FLH E I+RD K++NILLD +TAK+SDFGLA+A +
Sbjct: 130 LSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 240 ETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLV 299
+T + +R++GT Y APE + G +T +SD+YSFGVVLLE++TG +VD+ R + Q L+
Sbjct: 188 QTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLLL 244
Query: 300 DWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEP 359
D ++++ + ID ++ N + + S+A CL + RP + V + L+
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 360 L 360
+
Sbjct: 304 M 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 176/301 (58%), Gaps = 17/301 (5%)
Query: 67 AFSLFELETITKSFRSDYI------LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE 120
+FS +EL+ +T +F I +GEGGFG VYKGY++ N V +K L V + +E
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEE 72
Query: 121 GLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVP 179
Q ++ E+ + + +H NLV+L+G+ + D LVY +M GSL + L T P
Sbjct: 73 LKQ---QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 180 LSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD 239
LSW R IA GAA G+ FLH E I+RD K++NILLD +TAK+SDFGLA+A +
Sbjct: 130 LSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 240 ETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLV 299
+T + R++GT Y APE + G +T +SD+YSFGVVLLE++TG +VD+ R + Q L+
Sbjct: 188 QTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLLL 244
Query: 300 DWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEP 359
D ++++ + ID ++ N + + S+A CL + RP + V + L+
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
Query: 360 L 360
+
Sbjct: 304 M 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 184 bits (467), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 175/301 (58%), Gaps = 17/301 (5%)
Query: 67 AFSLFELETITKSFRSDYI------LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE 120
+FS +EL+ +T +F I +GEGGFG VYKGY++ N V +K L V + +E
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEE 66
Query: 121 GLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVP 179
Q ++ E+ + + +H NLV+L+G+ + D LVY +M GSL + L T P
Sbjct: 67 LKQ---QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP 123
Query: 180 LSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD 239
LSW R IA GAA G+ FLH E I+RD K++NILLD +TAK+SDFGLA+A +
Sbjct: 124 LSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 240 ETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLV 299
+ + R++GT Y APE + G +T +SD+YSFGVVLLE++TG +VD+ R + Q L+
Sbjct: 182 QXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLLL 238
Query: 300 DWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEP 359
D ++++ + ID ++ N + + S+A CL + RP + V + L+
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
Query: 360 L 360
+
Sbjct: 298 M 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 170/299 (56%), Gaps = 17/299 (5%)
Query: 67 AFSLFELETITKSFRSDYI------LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE 120
+FS +EL+ +T +F I GEGGFG VYKGY++ N V +K L V + +E
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEE 63
Query: 121 GLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVP 179
Q ++ E+ + +H NLV+L+G+ + D LVY + GSL + L T P
Sbjct: 64 LKQ---QFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 180 LSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD 239
LSW R IA GAA G+ FLH E I+RD K++NILLD +TAK+SDFGLA+A +
Sbjct: 121 LSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 240 ETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLV 299
+ +R++GT Y APE + G +T +SD+YSFGVVLLE++TG +VD+ R + Q L+
Sbjct: 179 QXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQLLL 235
Query: 300 DWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
D ++++ + ID + N + + S+A CL + RP + V + L+
Sbjct: 236 DIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 139/278 (50%), Gaps = 29/278 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR--EWLTEVNFLGQLRHPNL 143
+G G FGTV+ R VAVK+L ++ R E+L EV + +LRHPN+
Sbjct: 45 IGAGSFGTVH--------RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNA 202
V +G + + +V E++ RGSL L + A L R+ +A+ AKG+ +LHN
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
P+++RD K+ N+L+D YT K+ DFGL++ + S GT + APE +
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+SDVYSFGV+L EL T ++ P++ + V + K K L+I PR N
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF-------KCKRLEI--PRNLN 265
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
+ ++ C + P RP + +++ L PL
Sbjct: 266 -------PQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 142/279 (50%), Gaps = 31/279 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR--EWLTEVNFLGQLRHPNL 143
+G G FGTV+ R VAVK+L ++ R E+L EV + +LRHPN+
Sbjct: 45 IGAGSFGTVH--------RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNA 202
V +G + + +V E++ RGSL L + A L R+ +A+ AKG+ +LHN
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR-VMGTYGYAAPEYVMT 261
P+++R+ K+ N+L+D YT K+ DFGL++ T +S++ GT + APE +
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS---TFLSSKSAAGTPEWMAPEVLRD 213
Query: 262 GHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLE 321
+SDVYSFGV+L EL T ++ P++ + V + K K L+I PR
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF-------KCKRLEI--PRNL 264
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
N + ++ C + P RP + +++ L PL
Sbjct: 265 N-------PQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 40/288 (13%)
Query: 86 LGEGGFGTVYKGYI--DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
+G+GGFG V+KG + D++V V +KSL + E ++ +E+ EV + L HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSV-VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL G +V EF+ G L + L KA P+ W+ ++ + A G+ ++ N
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 204 RPVIYRDFKTSNILLDS-----DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
P+++RD ++ NI L S AK++DFGL++ H + ++G + + APE
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS-----VHSVSGLLGNFQWMAPET 197
Query: 259 VMTGH--LTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL----VDWARPKLNDKRKM 312
+ T ++D YSF ++L +LTG D+ K + + + RP + +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPED--- 254
Query: 313 LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
PRL N + C S +PK RP S +V+ L L
Sbjct: 255 ---CPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 40/288 (13%)
Query: 86 LGEGGFGTVYKGYI--DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
+G+GGFG V+KG + D++V V +KSL + E ++ +E+ EV + L HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSV-VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL G + +V EF+ G L + L KA P+ W+ ++ + A G+ ++ N
Sbjct: 86 VKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 204 RPVIYRDFKTSNILLDS-----DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
P+++RD ++ NI L S AK++DFG ++ H + ++G + + APE
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS-----VHSVSGLLGNFQWMAPET 197
Query: 259 VMTGH--LTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL----VDWARPKLNDKRKM 312
+ T ++D YSF ++L +LTG D+ K + + + RP + +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPED--- 254
Query: 313 LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
PRL N + C S +PK RP S +V+ L L
Sbjct: 255 ---CPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 139/288 (48%), Gaps = 40/288 (13%)
Query: 86 LGEGGFGTVYKGYI--DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
+G+GGFG V+KG + D++V V +KSL + E ++ +E+ EV + L HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSV-VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL G + +V EF+ G L + L KA P+ W+ ++ + A G+ ++ N
Sbjct: 86 VKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 204 RPVIYRDFKTSNILLDS-----DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
P+++RD ++ NI L S AK++DF L++ H + ++G + + APE
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS-----VHSVSGLLGNFQWMAPET 197
Query: 259 VMTGH--LTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL----VDWARPKLNDKRKM 312
+ T ++D YSF ++L +LTG D+ K + + + RP + +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPED--- 254
Query: 313 LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
PRL N + C S +PK RP S +V+ L L
Sbjct: 255 ---CPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELSEL 287
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 23/283 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNL 143
++G G FG VYKG + + G K +PVA+K L + R ++L E +GQ H N+
Sbjct: 51 VIGAGEFGEVYKGMLKTSS--GKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
++L G + +++ E+M G+L+ L R+ S + + G A G+ +L N
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFL-REKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEYVMTG 262
++RD NIL++S+ K+SDFGL++ E T+ ++ + APE +
Sbjct: 168 --YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
T+ SDV+SFG+V+ E++T + RP E S ++++ I+
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGE-----RPYWELS-----------NHEVMKAINDGFRL 269
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAND 365
+ L C Q RP +D+V L+ L A D
Sbjct: 270 PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G G FG V+ GY +V +K++ +EG +++ E + +L HP LV+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI--------REGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L G C E LV+EFM G L ++L R + T + + +G+A+L A
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--S 123
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
VI+RD N L+ + K+SDFG+ + D+ ST +A+PE +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
++SDV+SFGV++ E+ + K + R + E + D ++ PRL
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 228
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETL 357
A+ + +C + P+ RP S ++ L
Sbjct: 229 --ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 42/232 (18%)
Query: 73 LETITKSFRSDYILGEGGFGTVYKGYI--DENVRVGLKSLPVAVKVL----NKEGLQGHR 126
LE + I+G GGFG VY+ + DE VAVK +++ Q
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGDE----------VAVKAARHDPDEDISQTIE 51
Query: 127 EWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP---LSWA 183
E L+HPN++ L G C ++ + LV EF G L L K P ++WA
Sbjct: 52 NVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWA 111
Query: 184 TRMMIAFGAAKGLAFLHN-AERPVIYRDFKTSNILLD--------SDYTAKLSDFGLAKA 234
++ A+G+ +LH+ A P+I+RD K+SNIL+ S+ K++DFGLA+
Sbjct: 112 VQI------ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR- 164
Query: 235 GPQGDETHVSTRV--MGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGR 284
E H +T++ G Y + APE + + SDV+S+GV+L ELLTG
Sbjct: 165 -----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G G FG V+ GY +V +K++ +EG +++ E + +L HP LV+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI--------REGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L G C E LV+EFM G L ++L R + T + + +G+A+L A
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--C 123
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
VI+RD N L+ + K+SDFG+ + D+ ST +A+PE +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
++SDV+SFGV++ E+ + K + R + E + D ++ PRL
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 228
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETL 357
A+ + +C + P+ RP S ++ L
Sbjct: 229 --ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G G FG V+ GY +V +K++ +EG +++ E + +L HP LV+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTI--------REGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L G C E LV+EFM G L ++L R + T + + +G+A+L A
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--C 121
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
VI+RD N L+ + K+SDFG+ + D+ ST +A+PE +
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
++SDV+SFGV++ E+ + K + R + E + D ++ PRL
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 226
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETL 357
A+ + +C + P+ RP S ++ L
Sbjct: 227 --ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 79 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 135
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV+SFG++L E++T
Sbjct: 195 IKSDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 80
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 81 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 137
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV+SFG++L E++T
Sbjct: 197 IKSDVWSFGILLTEIVT 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 133/283 (46%), Gaps = 32/283 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 81
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 82 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 138
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 266 ARSDVYSFGVVLLELLT-GRKSVD-KTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQ 323
+SDV+SFG++L E++T GR T P Q+L + +++ P
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD---- 242
Query: 324 YSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDG 366
++ L C + P+ RP + LE A +G
Sbjct: 243 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 282
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G G FG V+ GY +V +K++ KEG +++ E + +L HP LV+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTI--------KEGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L G C E LV+EFM G L ++L R + T + + +G+A+L A
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--C 143
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
VI+RD N L+ + K+SDFG+ + D+ ST +A+PE +
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 202
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
++SDV+SFGV++ E+ + K + R + E + D ++ PRL
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 248
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETL 357
A+ + +C + P+ RP S ++ L
Sbjct: 249 --ASTHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G G FG V+ GY +V +K++ +EG +++ E + +L HP LV+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTI--------REGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L G C E LV+EFM G L ++L R + T + + +G+A+L A
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--C 126
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
VI+RD N L+ + K+SDFG+ + D+ ST +A+PE +
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
++SDV+SFGV++ E+ + K + R + E + D ++ PRL
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 231
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETL 357
A+ + +C + P+ RP S ++ L
Sbjct: 232 --ASTHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 133/283 (46%), Gaps = 32/283 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 73 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 266 ARSDVYSFGVVLLELLT-GRKSVD-KTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQ 323
+SDV+SFG++L E++T GR T P Q+L + +++ P
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD---- 233
Query: 324 YSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDG 366
++ L C + P+ RP + LE A +G
Sbjct: 234 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 116/227 (51%), Gaps = 14/227 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPNLV 144
LGEG FG V Y + G + VAVK L + HR W E++ L L H +++
Sbjct: 39 LGEGHFGKV-SLYCYDPTNDGTGEM-VAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 145 KLIGYCCEDDHRL---LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
K G CCED LV E++ GSL ++L R + + A ++ A +G+A+LH
Sbjct: 97 KYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHA 152
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETH-VSTRVMGTYGYAAPEYVM 260
I+RD N+LLD+D K+ DFGLAKA P+G E + V + APE +
Sbjct: 153 QH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 261 TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLN 307
SDV+SFGV L ELLT S ++ P+K L+ A+ ++
Sbjct: 211 EYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMT 256
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 74
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 75 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 131
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV+SFG++L E++T
Sbjct: 191 IKSDVWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 73
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 74 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 130
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV+SFG++L E++T
Sbjct: 190 IKSDVWSFGILLTEIVT 206
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 38 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ FL
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL- 150
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK--AGPQGDETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + D H T + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 96 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ FL
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL- 208
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA--GPQGDETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + D H T + A E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 35 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ FL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL- 147
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK--AGPQGDETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + D H T + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 73 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV+SFG++L E++T
Sbjct: 189 IKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 79 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 135
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV+SFG++L E++T
Sbjct: 195 IKSDVWSFGILLTEIVT 211
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 37 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ FL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL- 149
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA--GPQGDETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + D H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 133/283 (46%), Gaps = 32/283 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 82
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 83 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 139
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 266 ARSDVYSFGVVLLELLT-GRKSVD-KTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQ 323
+SDV+SFG++L E++T GR T P Q+L + +++ P
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD---- 243
Query: 324 YSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDG 366
++ L C + P+ RP + LE A +G
Sbjct: 244 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 283
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 77
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 78 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 134
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV+SFG++L E++T
Sbjct: 194 IKSDVWSFGILLTEIVT 210
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 38 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ FL
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL- 150
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA--GPQGDETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + D H T + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 67
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 68 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 124
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV+SFG++L E++T
Sbjct: 184 IKSDVWSFGILLTEIVT 200
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 37 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ FL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL- 149
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK--AGPQGDETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + D H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 42 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ FL
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKFL- 154
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK--AGPQGDETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + D H T + A E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 117/227 (51%), Gaps = 14/227 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPNLV 144
LGEG FG V Y + G + VAVK L + HR W E++ L L H +++
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDGTGEM-VAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 145 KLIGYCCEDDHR---LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
K G CCED LV E++ GSL ++L R + + A ++ A +G+A+LH+
Sbjct: 80 KYKG-CCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHS 135
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETH-VSTRVMGTYGYAAPEYVM 260
I+R+ N+LLD+D K+ DFGLAKA P+G E + V + APE +
Sbjct: 136 QH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 261 TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLN 307
SDV+SFGV L ELLT S ++ P+K L+ A+ ++
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMT 239
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 73 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV+SFG++L E++T
Sbjct: 189 IKSDVWSFGILLTEIVT 205
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 116/227 (51%), Gaps = 14/227 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPNLV 144
LGEG FG V Y + G + VAVK L + HR W E++ L L H +++
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDGTGEM-VAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 145 KLIGYCCEDDHR---LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
K G CCED LV E++ GSL ++L R + + A ++ A +G+A+LH
Sbjct: 80 KYKG-CCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHA 135
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETH-VSTRVMGTYGYAAPEYVM 260
I+R+ N+LLD+D K+ DFGLAKA P+G E + V + APE +
Sbjct: 136 QH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 261 TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLN 307
SDV+SFGV L ELLT S ++ P+K L+ A+ ++
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMT 239
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G G FG V+ GY +V +K++ +EG +++ E + +L HP LV+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTI--------REGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L G C E LV EFM G L ++L R + T + + +G+A+L A
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEA--C 124
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
VI+RD N L+ + K+SDFG+ + D+ ST +A+PE +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
++SDV+SFGV++ E+ + K + R + E + D ++ PRL
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRL----- 229
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETL 357
A+ + +C + P+ RP S ++ L
Sbjct: 230 --ASTHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 68
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 69 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 125
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+R+ + +NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV+SFG++L E++T
Sbjct: 185 IKSDVWSFGILLTEIVT 201
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 104/197 (52%), Gaps = 12/197 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G G V+ GY + + +V +KSL K+G +L E N + QL+H LV+
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSL--------KQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L ++ ++ E+M GSL + L + + L+ + +A A+G+AF+ ER
Sbjct: 73 LYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD + +NIL+ + K++DFGLA+ + T + APE + G T
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT-AREGAKFPIKWTAPEAINYGTFT 188
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV+SFG++L E++T
Sbjct: 189 IKSDVWSFGILLTEIVT 205
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 36 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ +L
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL- 148
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA--GPQGDETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + H T + A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 28/290 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 19 LGGGQFGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 71
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L +S + +A + + +L +
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK--KN 129
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 266 ARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQY 324
+SDV++FGV+L E+ T G PS+ L++ D R+E
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDYRMERPE 233
Query: 325 SVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 234 G--CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 281
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 20 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 67
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY + +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 68 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLH 125
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 126 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 261 ---TGHLTARSDVYSFGVVLLELLTGR 284
+ + +SDVY+FG+VL EL+TG+
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 32 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 79
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY + +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 80 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLH 137
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 138 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 261 ---TGHLTARSDVYSFGVVLLELLTGR 284
+ + +SDVY+FG+VL EL+TG+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 37 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL- 149
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD--ETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 56 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ +L
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL- 168
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD--ETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + H T + A E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 21/219 (9%)
Query: 85 ILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQLRHPN 142
+LG G FGTVYKG ++ E V +PVA+K+LN+ G + + E++ E + + HP+
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETV---KIPVAIKILNETTGPKANVEFMDEALIMASMDHPH 101
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFGAAKGLA 197
LV+L+G C +L V + M G L ++ + + L+W ++ AKG+
Sbjct: 102 LVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMM 154
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
+L ER +++RD N+L+ S K++DFGLA+ ++ + + + A E
Sbjct: 155 YLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 212
Query: 258 YVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKE 295
+ T +SDV+S+GV + EL+T G K D P++E
Sbjct: 213 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI-PTRE 250
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 55 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ +L
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL- 167
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD--ETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + H T + A E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 37 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL- 149
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD--ETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 32 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 79
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 80 VNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLH 137
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 138 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 261 ---TGHLTARSDVYSFGVVLLELLTGR 284
+ + +SDVY+FG+VL EL+TG+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 35 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ +L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL- 147
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD--ETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + H T + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 36 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ +L
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL- 148
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD--ETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + H T + A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 29 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ +L
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL- 141
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD--ETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + H T + A E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 32 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ +L
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL- 144
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD--ETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + H T + A E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
++G G FG VY G + +N K + AVK LN+ G ++LTE + HPN+
Sbjct: 34 VIGRGHFGCVYHGTLLDN---DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 144 VKLIGYCCEDDHR-LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--AAKGLAFLH 200
+ L+G C + L+V +M G L N + + P + +I FG AKG+ +L
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKYL- 146
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD--ETHVSTRVMGTYGYAAPEY 258
A + ++RD N +LD +T K++DFGLA+ + H T + A E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ T T +SDV+SFGV+L EL+T
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 117/219 (53%), Gaps = 21/219 (9%)
Query: 85 ILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQLRHPN 142
+LG G FGTVYKG ++ E V +PVA+K+LN+ G + + E++ E + + HP+
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETV---KIPVAIKILNETTGPKANVEFMDEALIMASMDHPH 78
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFGAAKGLA 197
LV+L+G C +L V + M G L ++ + + L+W ++ AKG+
Sbjct: 79 LVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMM 131
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
+L ER +++RD N+L+ S K++DFGLA+ ++ + + + A E
Sbjct: 132 YLE--ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE 189
Query: 258 YVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKE 295
+ T +SDV+S+GV + EL+T G K D P++E
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI-PTRE 227
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LGEG FG V+ N+ + VAVK L L +++ E L L+H ++VK
Sbjct: 23 LGEGAFGKVFLAEC-YNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLF--------------RKATVPLSWATRMMIAFG 191
G C + D ++V+E+M G L L R+A L + + IA
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
A G+ +L A + ++RD T N L+ ++ K+ DFG+++ D V M
Sbjct: 142 IASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE +M T SDV+SFGV+L E+ T
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 93
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E+M GSL++ L RK + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGM 152
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGLA+ E +TR
Sbjct: 153 LRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGG 210
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 131/290 (45%), Gaps = 28/290 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 19 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 71
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L +S + +A + + +L +
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK--KN 129
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 266 ARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQY 324
+SDV++FGV+L E+ T G PS+ L++ D R+E
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDYRMERPE 233
Query: 325 SVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 234 G--CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 281
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 43 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 90
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY + +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 91 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLH 148
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 149 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 261 TGH---LTARSDVYSFGVVLLELLTGR 284
+ +SDVY+FG+VL EL+TG+
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 21 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 68
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY + +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 69 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLH 126
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 127 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 261 TGH---LTARSDVYSFGVVLLELLTGR 284
+ +SDVY+FG+VL EL+TG+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 44 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 91
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY + +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 92 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLH 149
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 150 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 261 TGH---LTARSDVYSFGVVLLELLTGR 284
+ +SDVY+FG+VL EL+TG+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 18 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 65
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY + +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 66 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLH 123
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 124 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 261 TGH---LTARSDVYSFGVVLLELLTGR 284
+ +SDVY+FG+VL EL+TG+
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 21 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 68
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY + +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 69 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLH 126
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 127 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 261 TGH---LTARSDVYSFGVVLLELLTGR 284
+ +SDVY+FG+VL EL+TG+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 16 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 63
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY + +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 64 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLH 121
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 122 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 261 TGH---LTARSDVYSFGVVLLELLTGR 284
+ +SDVY+FG+VL EL+TG+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 36 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 83
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY + +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 84 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLH 141
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 142 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 261 TGH---LTARSDVYSFGVVLLELLTGR 284
+ +SDVY+FG+VL EL+TG+
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 44 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 91
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY + +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 92 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLH 149
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 150 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 261 TGH---LTARSDVYSFGVVLLELLTGR 284
+ +SDVY+FG+VL EL+TG+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 64
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E+M GSL++ L RK + + +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGM 123
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL++ E +TR
Sbjct: 124 LRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 16 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 63
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY + +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 64 VNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLH 121
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 122 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 261 TGH---LTARSDVYSFGVVLLELLTGR 284
+ +SDVY+FG+VL EL+TG+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQLRHPNL 143
LGEG FG V Y + G + VAVK L KEG Q W E+ L L H ++
Sbjct: 16 LGEGHFGKV-SLYCYDPTNDGTGEM-VAVKAL-KEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 144 VKLIGYCCEDDHR---LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
VK G CCED LV E++ GSL ++L R + A ++ A +G+A+LH
Sbjct: 73 VKYKG-CCEDQGEKSVQLVMEYVPLGSLRDYLPRHC---VGLAQLLLFAQQICEGMAYLH 128
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETH-VSTRVMGTYGYAAPEYV 259
I+R N+LLD+D K+ DFGLAKA P+G E + V + APE +
Sbjct: 129 AQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 186
Query: 260 MTGHLTARSDVYSFGVVLLELLT 282
SDV+SFGV L ELLT
Sbjct: 187 KECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQLRHPNL 143
LGEG FG V Y + G + VAVK L KEG Q W E+ L L H ++
Sbjct: 17 LGEGHFGKV-SLYCYDPTNDGTGEM-VAVKAL-KEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 144 VKLIGYCCEDDHR---LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
VK G CCED LV E++ GSL ++L R + A ++ A +G+A+LH
Sbjct: 74 VKYKG-CCEDQGEKSVQLVMEYVPLGSLRDYLPRHC---VGLAQLLLFAQQICEGMAYLH 129
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETH-VSTRVMGTYGYAAPEYV 259
I+R N+LLD+D K+ DFGLAKA P+G E + V + APE +
Sbjct: 130 AQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 187
Query: 260 MTGHLTARSDVYSFGVVLLELLT 282
SDV+SFGV L ELLT
Sbjct: 188 KECKFYYASDVWSFGVTLYELLT 210
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 26 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 81
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E+M GSL++ L RK + + +
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGM 140
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL++ E +TR
Sbjct: 141 LRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 93
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E+M GSL++ L RK + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGM 152
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL++ E +TR
Sbjct: 153 LRGIASGMKYL--SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 28/276 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 19 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 71
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L +S + +A + + +L ++
Sbjct: 72 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 129
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 266 ARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQY 324
+SDV++FGV+L E+ T G PS+ L++ D R+E
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------------KDYRMERPE 233
Query: 325 SVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
+K L C NP RP +++ + E +
Sbjct: 234 G--CPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 93
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E+M GSL++ L RK + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGM 152
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL++ E +TR
Sbjct: 153 LRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 93
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E+M GSL++ L RK + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGM 152
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL++ E +TR
Sbjct: 153 LRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 93
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E+M GSL++ L RK + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGM 152
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL++ E +TR
Sbjct: 153 LRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 93
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E+M GSL++ L RK + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGM 152
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL++ E +TR
Sbjct: 153 LRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 36 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 91
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E+M GSL++ L RK + + +
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGM 150
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL++ E +TR
Sbjct: 151 LRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 208
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 209 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-----KEGLQGHREWLTEVNFLGQLRH 140
+G G FGTVYKG +V AVK+LN + LQ + EV L + RH
Sbjct: 16 IGSGSFGTVYKGKWHGDV---------AVKMLNVTAPTPQQLQAFK---NEVGVLRKTRH 63
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
N++ +GY +V ++ SL +HL T + IA A+G+ +LH
Sbjct: 64 VNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLH 121
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ +I+RD K++NI L D T K+ DFGLA + +H ++ G+ + APE +
Sbjct: 122 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 261 TGH---LTARSDVYSFGVVLLELLTGR 284
+ +SDVY+FG+VL EL+TG+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 35/295 (11%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
K + ++G G FG V K ++ VA+K + E + + ++ E+ L +
Sbjct: 9 KEIEVEEVVGRGAFGVVCKA--------KWRAKDVAIKQIESESER--KAFIVELRQLSR 58
Query: 138 LRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMM-IAFGAAKGL 196
+ HPN+VKL G C + LV E+ GSL N L +P A M ++G+
Sbjct: 59 VNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 197 AFLHNAE-RPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVMGTYGYA 254
A+LH+ + + +I+RD K N+LL + T K+ DFG A +TH+ T G+ +
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWM 171
Query: 255 APEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQ 314
APE + + + DV+S+G++L E++T RK D+ + WA N R
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWA--VHNGTRP--- 224
Query: 315 IIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNE 369
P ++N + SL C S++P RP M ++V+ + L G +E
Sbjct: 225 ---PLIKN-----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 271
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 111/215 (51%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 93
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E+M GSL++ L RK + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGM 152
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL + E +TR
Sbjct: 153 LRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGG 210
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 35/295 (11%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
K + ++G G FG V K ++ VA+K + E + + ++ E+ L +
Sbjct: 8 KEIEVEEVVGRGAFGVVCKA--------KWRAKDVAIKQIESESER--KAFIVELRQLSR 57
Query: 138 LRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMM-IAFGAAKGL 196
+ HPN+VKL G C + LV E+ GSL N L +P A M ++G+
Sbjct: 58 VNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 197 AFLHNAE-RPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVMGTYGYA 254
A+LH+ + + +I+RD K N+LL + T K+ DFG A +TH+ T G+ +
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWM 170
Query: 255 APEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQ 314
APE + + + DV+S+G++L E++T RK D+ + WA N R
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWA--VHNGTRP--- 223
Query: 315 IIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNE 369
P ++N + SL C S++P RP M ++V+ + L G +E
Sbjct: 224 ---PLIKN-----LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 12/217 (5%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + + ++G G FG V G++ G + + VA+K L K G + R++
Sbjct: 26 FAKEIDISCVKIEQVIGAGEFGEVCSGHLK---LPGKREIFVAIKTL-KSGYTEKQRRDF 81
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L+E + +GQ HPN++ L G + +++ EFM GSL++ L R+ + + +
Sbjct: 82 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGM 140
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L A+ ++RD NIL++S+ K+SDFGL++ T +
Sbjct: 141 LRGIAAGMKYL--ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL 198
Query: 249 G---TYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
G + APE + T+ SDV+S+G+V+ E+++
Sbjct: 199 GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 8/199 (4%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG GG TVY + E+ + +K A+ + +E + + + EV+ QL H N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
+I EDD LV E++ +L ++ ++ PLS T + G+ H+
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHDMR-- 131
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
+++RD K NIL+DS+ T K+ DFG+AKA + T + V+GT Y +PE
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEATD 190
Query: 266 ARSDVYSFGVVLLELLTGR 284
+D+YS G+VL E+L G
Sbjct: 191 ECTDIYSIGIVLYEMLVGE 209
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 122/225 (54%), Gaps = 17/225 (7%)
Query: 82 SDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQ--GHREWLTEVNFLGQLR 139
+D LG G FG+V +G R+ K + VA+KVL K+G + E + E + QL
Sbjct: 14 ADIELGCGNFGSVRQGV----YRMRKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLD 68
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF-RKATVPLSWATRMMIAFGAAKGLAF 198
+P +V+LIG C+ + +LV E G L L ++ +P+S ++ + G+ +
Sbjct: 69 NPYIVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL--HQVSMGMKY 125
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAP 256
L E+ ++RD N+LL + + AK+SDFGL+KA D+++ + R G + + AP
Sbjct: 126 LE--EKNFVHRDLAARNVLLVNRHYAKISDFGLSKA-LGADDSYYTARSAGKWPLKWYAP 182
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
E + ++RSDV+S+GV + E L+ G+K K + + + ++
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 227
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 111/215 (51%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 93
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E M GSL++ L RK + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGM 152
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL++ E +TR
Sbjct: 153 LRGIASGMKYL--SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 111/215 (51%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 64
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E M GSL++ L RK + + +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGM 123
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL++ E +TR
Sbjct: 124 LRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 26 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L +S + +A + + +L ++
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 136
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 239
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 288
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 38/278 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ G + N +V +K+L K G +L E + +L+H LV+
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL--------KPGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L E+ +V E+M +GSL + L L + +A A G+A++
Sbjct: 69 LYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-- 125
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD +++NIL+ + K++DFGLA+ + +E + APE + G T
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARL-IEDNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 266 ARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQY 324
+SDV+SFG++L EL+T GR P +N++ + Q+ E Y
Sbjct: 185 IKSDVWSFGILLTELVTKGRVPY----------------PGMNNREVLEQV-----ERGY 223
Query: 325 SVRAAQKAC----SLAYYCLSQNPKARPLMSDVVETLE 358
+ Q L +C ++P+ RP + LE
Sbjct: 224 RMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 42/283 (14%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG G FG V +KG D VAVK++ KEG E+ E + +L HP
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----------VAVKMI-KEGSMSEDEFFQEAQTMMKLSHP 63
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
LVK G C ++ +V E++ G L N+L R L + + + + +G+AFL +
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLES 122
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT---YGYAAPEY 258
+ I+RD N L+D D K+SDFG+ + D+ +VS+ +GT ++APE
Sbjct: 123 HQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVL--DDQYVSS--VGTKFPVKWSAPEV 176
Query: 259 VMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDP 318
+++SDV++FG+++ E+ + K + E L K++ ++ + P
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL------KVSQGHRLYR---P 227
Query: 319 RLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ 361
L A+ + Y C + P+ RP ++ ++EPL+
Sbjct: 228 HL-------ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 40/286 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G FGTVYKG +V V + +KV++ E Q R EV L + RH N+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKI------LKVVDPTPEQFQAFR---NEVAVLRKTRHVNI 94
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ +GY +D+ +V ++ SL HL + T + IA A+G+ +LH
Sbjct: 95 LLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQET-KFQMFQLIDIARQTAQGMDYLH--A 150
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM--- 260
+ +I+RD K++NI L T K+ DFGLA + + + G+ + APE +
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 261 TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII---- 316
+ +SDVYS+G+VL EL+TG + +N++ +++ ++
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTG----------------ELPYSHINNRDQIIFMVGRGY 254
Query: 317 -DPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ 361
P L Y + L C+ + + RPL ++ ++E LQ
Sbjct: 255 ASPDLSKLYK-NCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L +S + +A + + +L ++
Sbjct: 74 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L +S + +A + + +L ++
Sbjct: 74 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L +S + +A + + +L ++
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L +S + +A + + +L ++
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 283
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 111/215 (51%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + D ++G G FG V G + + K + VA+K L K G + R++
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTL-KVGYTEKQRRDF 93
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E + +GQ HPN+++L G + ++V E M GSL++ L RK + + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGM 152
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L ++ ++RD NIL++S+ K+SDFGL++ E +TR
Sbjct: 153 LRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ +PE + T+ SDV+S+G+VL E+++
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 55
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ + V E+M +GSL + L + L + +A A
Sbjct: 56 VMKKLRHEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 114
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 115 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQGAKFPIKW 171
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 172 TAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 23/203 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +K+L K G + +L E N + L+H LV+
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL--------KPGTMSVQAFLEEANLMKTLQHDKLVR 72
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFR----KATVPLSWATRMMIAFGA--AKGLAFL 199
L ++ ++ E+M +GSL + L K +P +I F A A+G+A++
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP------KLIDFSAQIAEGMAYI 126
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
+ I+RD + +N+L+ K++DFGLA+ + +E + APE +
Sbjct: 127 ER--KNYIHRDLRAANVLVSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKWTAPEAI 183
Query: 260 MTGHLTARSDVYSFGVVLLELLT 282
G T +SDV+SFG++L E++T
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 65
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +++ E+M +GSL + L + L + +A A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 125 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQGAKFPIKW 181
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 12/217 (5%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + + ++G G FG V +G + G K VA+K L K G + RE+
Sbjct: 9 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAP---GKKESCVAIKTL-KGGYTERQRREF 64
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L+E + +GQ HPN+++L G +++ EFM G+L++ L R + + +
Sbjct: 65 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGM 123
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L AE ++RD NIL++S+ K+SDFGL++ + T +
Sbjct: 124 LRGIASGMRYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSL 181
Query: 249 G---TYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
G + APE + T+ SD +S+G+V+ E+++
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 22 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 74
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 75 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 132
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 192 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 235
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 284
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 149/335 (44%), Gaps = 34/335 (10%)
Query: 40 ISDLSDPSTPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYI 99
I+ L P+ RN +Y + +E+E + + + LG G +G VY+G
Sbjct: 190 ITTLHYPAPKRN------KPTIYGVSPNYDKWEMERTDITMK--HKLGGGQYGEVYEGVW 241
Query: 100 DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLV 159
+ SL VAVK L ++ ++ E+L E + +++HPNLV+L+G C + ++
Sbjct: 242 KK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 160 YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLD 219
EFM G+L ++L +S + +A + + +L ++ I+R+ N L+
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKNFIHRNLAARNCLVG 352
Query: 220 SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE 279
++ K++DFGL++ GD + APE + + +SDV++FGV+L E
Sbjct: 353 ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 411
Query: 280 LLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYC 339
+ T S P + D ++ ++++ + +K L C
Sbjct: 412 IATYGMS---------------PYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRAC 455
Query: 340 LSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
NP RP +++ + E + + +E+ L
Sbjct: 456 WQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 490
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 23/203 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V+ GY + + +V +K+L K G + +L E N + L+H LV+
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL--------KPGTMSVQAFLEEANLMKTLQHDKLVR 71
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFR----KATVPLSWATRMMIAFGA--AKGLAFL 199
L +++ ++ EFM +GSL + L K +P +I F A A+G+A++
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP------KLIDFSAQIAEGMAYI 125
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
+ I+RD + +N+L+ K++DFGLA+ + +E + APE +
Sbjct: 126 ER--KNYIHRDLRAANVLVSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKWTAPEAI 182
Query: 260 MTGHLTARSDVYSFGVVLLELLT 282
G T +S+V+SFG++L E++T
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 314
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +GSL + L + L + +A A
Sbjct: 315 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 373
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 374 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 430
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 18 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L P S + + +A A G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N ++ D+T K+ DFG+ + + D + + + +P
Sbjct: 137 AYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 239
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 240 EGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEP 285
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 58
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +GSL + L + L + +A A
Sbjct: 59 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 117
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 118 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 174
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 65
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +++ E+M +GSL + L + L + +A A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 125 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 181
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 10/201 (4%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQLRHPN 142
++G G FG V G + G + LPVA+K L K G + R++L E + +GQ HPN
Sbjct: 29 VIGAGEFGEVCSGRLK---LPGKRELPVAIKTL-KVGYTEKQRRDFLGEASIMGQFDHPN 84
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
++ L G + ++V E+M GSL+ L +K + + + G + G+ +L +
Sbjct: 85 IIHLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTVIQLVGMLRGISAGMKYL--S 141
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT-YGYAAPEYVMT 261
+ ++RD NIL++S+ K+SDFGL++ E +TR + APE +
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 262 GHLTARSDVYSFGVVLLELLT 282
T+ SDV+S+G+V+ E+++
Sbjct: 202 RKFTSASDVWSYGIVMWEVVS 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L P S + + +A A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N ++ D+T K+ DFG+ + + D + + + +P
Sbjct: 146 AYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 248
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 249 EGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 294
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S + + LG G FG V+ +++ +V +K++ K G +L E N
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM--------KPGSMSVEAFLAEAN 62
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA- 192
+ L+H LVKL ++ ++ EFM +GSL + F K+ +I F A
Sbjct: 63 VMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLD--FLKSDEGSKQPLPKLIDFSAQ 119
Query: 193 -AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
A+G+AF+ +R I+RD + +NIL+ + K++DFGLA+ + +E
Sbjct: 120 IAEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPI 176
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + G T +SDV+SFG++L+E++T
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 26 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 136
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 239
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 288
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 26/211 (12%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S + + LG G FG V+ +++ +V +K++ K G +L E N
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM--------KPGSMSVEAFLAEAN 229
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA- 192
+ L+H LVKL ++ ++ EFM +GSL + F K+ +I F A
Sbjct: 230 VMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLD--FLKSDEGSKQPLPKLIDFSAQ 286
Query: 193 -AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
A+G+AF+ +R I+RD + +NIL+ + K++DFGLA+ G +
Sbjct: 287 IAEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARVGAK-----------FPI 333
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + G T +SDV+SFG++L+E++T
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG-LQGHREWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + ++ G VAVK +N+ L+ E+L E + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L+V E M G L+++L P + + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA++ ++RD N ++ D+T K+ DFG+ + + D + + + AP
Sbjct: 144 AYL-NAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SD++SFGVVL E+ SL + L++++ + ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
D +Q ++ L C NPK RP ++V L+
Sbjct: 247 DGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 84 YILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
+ LGEG FG V+ N+ + VAVK L + +++ E L L+H ++
Sbjct: 24 WELGEGAFGKVFLAEC-HNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 82
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK--------------ATVPLSWATRMMIA 189
V+ G C E L+V+E+M G L N R A PL + +A
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG 249
A G+ +L A ++RD T N L+ K+ DFG+++ D V R M
Sbjct: 142 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 250 TYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE ++ T SDV+SFGVVL E+ T
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG-LQGHREWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + ++ G VAVK +N+ L+ E+L E + + ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L+V E M G L+++L P + + +A A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA++ ++RD N ++ D+T K+ DFG+ + + D + + + AP
Sbjct: 141 AYL-NAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SD++SFGVVL E+ SL + L++++ + ++
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 243
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
D +Q ++ L C NPK RP ++V L+
Sbjct: 244 DGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 23 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 75
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 133
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 236
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 285
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 54
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +GSL + L + L + +A A
Sbjct: 55 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 113
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 114 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 170
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 171 TAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 23 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 75
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 133
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 236
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 285
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 84 YILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
+ LGEG FG V+ N+ + VAVK L + +++ E L L+H ++
Sbjct: 18 WELGEGAFGKVFLAEC-HNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 76
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK--------------ATVPLSWATRMMIA 189
V+ G C E L+V+E+M G L N R A PL + +A
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG 249
A G+ +L A ++RD T N L+ K+ DFG+++ D V R M
Sbjct: 136 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 250 TYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE ++ T SDV+SFGVVL E+ T
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 65
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +GSL + L + L + +A A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 125 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 181
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 22 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQ 74
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 75 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 132
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 192 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 235
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 284
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 12/217 (5%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + + ++G G FG V +G + G K VA+K L K G + RE+
Sbjct: 7 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAP---GKKESCVAIKTL-KGGYTERQRREF 62
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L+E + +GQ HPN+++L G +++ EFM G+L++ L R + + +
Sbjct: 63 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGM 121
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G A G+ +L AE ++RD NIL++S+ K+SDFGL++ + T +
Sbjct: 122 LRGIASGMRYL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSL 179
Query: 249 G---TYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
G + APE + T+ SD +S+G+V+ E+++
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 23 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 75
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 76 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 133
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 236
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 285
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LGEG FG V+ N+ + VAVK L +++ E L L+H ++VK
Sbjct: 21 LGEGAFGKVFLAEC-YNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-------------LSWATRMMIAFGA 192
G C E D ++V+E+M G L F +A P L+ + + IA
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNK--FLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYG 252
A G+ +L A + ++RD T N L+ + K+ DFG+++ D V M
Sbjct: 138 AAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 253 YAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE +M T SDV+S GVVL E+ T
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 84 YILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
+ LGEG FG V+ N+ + VAVK L + +++ E L L+H ++
Sbjct: 47 WELGEGAFGKVFLAEC-HNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK--------------ATVPLSWATRMMIA 189
V+ G C E L+V+E+M G L N R A PL + +A
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG 249
A G+ +L A ++RD T N L+ K+ DFG+++ D V R M
Sbjct: 165 SQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 250 TYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE ++ T SDV+SFGVVL E+ T
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 56
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +GSL + L + L + +A A
Sbjct: 57 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 115
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 116 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 172
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
+S R + LG+G FG V+ G + RV +K+L K G +L E + +
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQVMKK 235
Query: 138 LRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
LRH LV+L E+ +V E+M +GSL + L + L + +A A G+A
Sbjct: 236 LRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++ ++RD + +NIL+ + K++DFGLA+ + +E + APE
Sbjct: 295 YVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 351
Query: 258 YVMTGHLTARSDVYSFGVVLLELLT 282
+ G T +SDV+SFG++L EL T
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 132/289 (45%), Gaps = 26/289 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 34 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 86
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 87 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 144
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 204 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 247
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
+K L C NP RP +++ + E + + +E+ L
Sbjct: 248 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 296
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 65
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +GSL + L + L + +A A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 125 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 181
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 23 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHL--FRKATV------PLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L R A P S + + +A A G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N ++ D+T K+ DFG+ + + D + + + +P
Sbjct: 142 AYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 244
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 245 EGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 290
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHL--FRKATV------PLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L R A P S + + +A A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N ++ D+T K+ DFG+ + + D + + + +P
Sbjct: 152 AYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 254
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 255 EGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
+S R + LG+G FG V+ G + RV +K+L K G +L E + +
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQVMKK 235
Query: 138 LRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
LRH LV+L E+ +V E+M +GSL + L + L + +A A G+A
Sbjct: 236 LRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++ ++RD + +NIL+ + K++DFGLA+ + +E + APE
Sbjct: 295 YVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 351
Query: 258 YVMTGHLTARSDVYSFGVVLLELLT 282
+ G T +SDV+SFG++L EL T
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 19/211 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVL-NKEGLQGHREWLTEVNFLG 136
R +LG G FGTV+KG +I E + +PV +KV+ +K G Q + + +G
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESI---KIPVCIKVIEDKSGRQSFQAVTDHMLAIG 88
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL--FRKATVP---LSWATRMMIAFG 191
L H ++V+L+G C +L V +++ GSL +H+ R A P L+W ++
Sbjct: 89 SLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI----- 142
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
AKG+ +L E +++R+ N+LL S +++DFG+A P D+ + +
Sbjct: 143 -AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ A E + G T +SDV+S+GV + EL+T
Sbjct: 200 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 122/225 (54%), Gaps = 17/225 (7%)
Query: 82 SDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQ--GHREWLTEVNFLGQLR 139
+D LG G FG+V +G R+ K + VA+KVL K+G + E + E + QL
Sbjct: 340 ADIELGCGNFGSVRQGV----YRMRKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLD 394
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF-RKATVPLSWATRMMIAFGAAKGLAF 198
+P +V+LIG C+ + +LV E G L L ++ +P+S ++ + G+ +
Sbjct: 395 NPYIVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL--HQVSMGMKY 451
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAP 256
L E+ ++R+ N+LL + + AK+SDFGL+KA D+++ + R G + + AP
Sbjct: 452 LE--EKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL-GADDSYYTARSAGKWPLKWYAP 508
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
E + ++RSDV+S+GV + E L+ G+K K + + + ++
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 553
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 62
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +GSL + L + L + ++ A
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIA 121
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 122 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEWTARQGAKFPIKW 178
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 109/211 (51%), Gaps = 16/211 (7%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S + + LG G FG V+ +++ +V +K++ K G +L E N
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM--------KPGSMSVEAFLAEAN 235
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA- 192
+ L+H LVKL ++ ++ EFM +GSL + F K+ +I F A
Sbjct: 236 VMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLD--FLKSDEGSKQPLPKLIDFSAQ 292
Query: 193 -AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
A+G+AF+ +R I+RD + +NIL+ + K++DFGLA+ + +E
Sbjct: 293 IAEGMAFIE--QRNYIHRDLRAANILVSASLVCKIADFGLARV-IEDNEYTAREGAKFPI 349
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + G T +SDV+SFG++L+E++T
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 19/211 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVL-NKEGLQGHREWLTEVNFLG 136
R +LG G FGTV+KG +I E + +PV +KV+ +K G Q + + +G
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESI---KIPVCIKVIEDKSGRQSFQAVTDHMLAIG 70
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL--FRKATVP---LSWATRMMIAFG 191
L H ++V+L+G C +L V +++ GSL +H+ R A P L+W ++
Sbjct: 71 SLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI----- 124
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
AKG+ +L E +++R+ N+LL S +++DFG+A P D+ + +
Sbjct: 125 -AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ A E + G T +SDV+S+GV + EL+T
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 149/335 (44%), Gaps = 34/335 (10%)
Query: 40 ISDLSDPSTPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYI 99
I+ L P+ RN +Y + +E+E + + + LG G +G VY+G
Sbjct: 229 ITTLHYPAPKRN------KPTVYGVSPNYDKWEMERTDITMK--HKLGGGQYGEVYEGVW 280
Query: 100 DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLV 159
+ SL VAVK L ++ ++ E+L E + +++HPNLV+L+G C + ++
Sbjct: 281 KK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 333
Query: 160 YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLD 219
EFM G+L ++L ++ + +A + + +L ++ I+R+ N L+
Sbjct: 334 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRNLAARNCLVG 391
Query: 220 SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE 279
++ K++DFGL++ GD + APE + + +SDV++FGV+L E
Sbjct: 392 ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 450
Query: 280 LLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYC 339
+ T S P + D ++ ++++ + +K L C
Sbjct: 451 IATYGMS---------------PYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRAC 494
Query: 340 LSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
NP RP +++ + E + + +E+ L
Sbjct: 495 WQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 529
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 12/205 (5%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
+S R + LG+G FG V+ G + RV +K+L K G +L E + +
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQVMKK 235
Query: 138 LRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
LRH LV+L E+ +V E+M +GSL + L + L + +A A G+A
Sbjct: 236 LRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++ ++RD + +NIL+ + K++DFGLA+ + +E + APE
Sbjct: 295 YVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKWTAPE 351
Query: 258 YVMTGHLTARSDVYSFGVVLLELLT 282
+ G T +SDV+SFG++L EL T
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 62
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +GSL + L + L + ++ A
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIA 121
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 122 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 178
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 67 AFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QG 124
A F E + + ++G G FG V G + G + + VA+K L K G +
Sbjct: 32 AVHQFAKELDASCIKIERVIGAGEFGEVCSGRLK---LPGKRDVAVAIKTL-KVGYTEKQ 87
Query: 125 HREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWAT 184
R++L E + +GQ HPN+V L G ++V EFM G+L+ L RK +
Sbjct: 88 RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL-RKHDGQFTVIQ 146
Query: 185 RMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 244
+ + G A G+ +L A+ ++RD NIL++S+ K+SDFGL++ + D V
Sbjct: 147 LVGMLRGIAAGMRYL--ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-IEDDPEAVY 203
Query: 245 TRVMGTYG--YAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
T G + APE + T+ SDV+S+G+V+ E+++
Sbjct: 204 TTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 26 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 136
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 239
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
+K L C NP RP +++ + E +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 65
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ ++RH LV+L E+ +V E+M +GSL + L + L + +A A
Sbjct: 66 VMKKIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 125 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 181
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 149/335 (44%), Gaps = 34/335 (10%)
Query: 40 ISDLSDPSTPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYI 99
I+ L P+ RN +Y + +E+E + + + LG G +G VY+G
Sbjct: 187 ITTLHYPAPKRN------KPTVYGVSPNYDKWEMERTDITMK--HKLGGGQYGEVYEGVW 238
Query: 100 DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLV 159
+ SL VAVK L ++ ++ E+L E + +++HPNLV+L+G C + ++
Sbjct: 239 KK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 291
Query: 160 YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLD 219
EFM G+L ++L ++ + +A + + +L ++ I+R+ N L+
Sbjct: 292 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKNFIHRNLAARNCLVG 349
Query: 220 SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE 279
++ K++DFGL++ GD + APE + + +SDV++FGV+L E
Sbjct: 350 ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 408
Query: 280 LLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYC 339
+ T S P + D ++ ++++ + +K L C
Sbjct: 409 IATYGMS---------------PYPGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRAC 452
Query: 340 LSQNPKARPLMSDVVETLEPLQCANDGGNEISSSL 374
NP RP +++ + E + + +E+ L
Sbjct: 453 WQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 487
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 26 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 79 LLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 136
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 239
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
+K L C NP RP +++ + E +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 65
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +G L + L + L + +A A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 125 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 181
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 65
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +GSL + L + L + +A A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD +NIL+ + K++DFGLA+ + +E +
Sbjct: 125 SGMAYVERMN--YVHRDLAAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 181
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 25 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 77
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 78 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 135
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 195 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 238
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
+K L C NP RP +++ + E +
Sbjct: 239 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 26 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 136
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 239
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
+K L C NP RP +++ + E +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
+K L C NP RP +++ + E +
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 110/215 (51%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + + ++G G FG V G + G + + VA+K L K G + R++
Sbjct: 22 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVP---GKREICVAIKTL-KAGYTDKQRRDF 77
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L+E + +GQ HPN++ L G + +++ E+M GSL+ L RK + + +
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGM 136
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G G+ +L ++ ++RD NIL++S+ K+SDFG+++ E +TR
Sbjct: 137 LRGIGSGMKYL--SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 194
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T+ SDV+S+G+V+ E+++
Sbjct: 195 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L P S + + +A A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N ++ D+T K+ DFG+ + + D + + + +P
Sbjct: 139 AYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 241
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 242 EGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 287
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGTMSPEAFLQEAQ 65
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +G L + L + L + +A A
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIA 124
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGLA+ + +E +
Sbjct: 125 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW 181
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 12/215 (5%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRV-GLKSLPVAVKVLNKEGL--QGHRE 127
F E + I+G G G V G +RV G + +PVA+K L K G + R+
Sbjct: 42 FTREIEASRIHIEKIIGSGDSGEVCYG----RLRVPGQRDVPVAIKAL-KAGYTERQRRD 96
Query: 128 WLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMM 187
+L+E + +GQ HPN+++L G ++V E+M GSL+ L R + +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL-RTHDGQFTIMQLVG 155
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-GPQGDETHVSTR 246
+ G G+ +L ++ ++RD N+L+DS+ K+SDFGL++ D + +T
Sbjct: 156 MLRGVGAGMRYL--SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG 213
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELL 281
+ APE + ++ SDV+SFGVV+ E+L
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L P S + + +A A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N ++ D+T K+ DFG+ + + D + + + +P
Sbjct: 145 AYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 247
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 248 EGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 293
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 26/275 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY+G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 21 LGGGQYGEVYEGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + ++ EFM G+L ++L ++ + +A + + +L ++
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 131
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 266 ARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYS 325
+SDV++FGV+L E+ T S P + D ++ ++++ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMS---------------PYPGI-DLSQVYELLEKDYRMERP 234
Query: 326 VRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
+K L C NP RP +++ + E +
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 12/203 (5%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQLRHPN 142
++G G FG V G++ G + + VA+K L K G + R++L+E + +GQ HPN
Sbjct: 14 VIGAGEFGEVCSGHLK---LPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
++ L G + +++ EFM GSL++ L R+ + + + G A G+ +L A
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIAAGMKYL--A 126
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG---TYGYAAPEYV 259
+ ++R NIL++S+ K+SDFGL++ T +G + APE +
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 260 MTGHLTARSDVYSFGVVLLELLT 282
T+ SDV+S+G+V+ E+++
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L P S + + +A A G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N ++ D+T K+ DFG+ + + D + + + +P
Sbjct: 152 AYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 254
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 255 EGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L P S + + +A A G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N ++ D+T K+ DFG+ + + D + + + +P
Sbjct: 146 AYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 248
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 249 EGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 294
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 24 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L P S + + +A A G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N ++ D+T K+ DFG+ + + D + + + +P
Sbjct: 143 AYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 245
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 246 EGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 291
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG-LQGHREWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + ++ G VAVK +N+ L+ E+L E + + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L+V E M G L+++L P + + +A A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA++ ++RD N ++ D+T K+ DFG+ + + D + + + AP
Sbjct: 143 AYL-NAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SD++SFGVVL E+ SL + L++++ + ++
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 245
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
D +Q ++ L C NPK RP ++V L+
Sbjct: 246 DGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L P S + + +A A G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N ++ D+T K+ DFG+ + + D + + + +P
Sbjct: 145 AYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 247
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 248 EGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 293
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRV-GLKSLPVAVKVLNKEGL--QGHRE 127
F E + I+G G G V G +RV G + +PVA+K L K G + R+
Sbjct: 42 FTREIEASRIHIEKIIGSGDSGEVCYG----RLRVPGQRDVPVAIKAL-KAGYTERQRRD 96
Query: 128 WLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMM 187
+L+E + +GQ HPN+++L G ++V E+M GSL+ L R + +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL-RTHDGQFTIMQLVG 155
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA---GPQGDETHVS 244
+ G G+ +L ++ ++RD N+L+DS+ K+SDFGL++ P T
Sbjct: 156 MLRGVGAGMRYL--SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELL 281
++ + APE + ++ SDV+SFGVV+ E+L
Sbjct: 214 GKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 110/215 (51%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + + ++G G FG V G + G + + VA+K L K G + R++
Sbjct: 7 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVP---GKREICVAIKTL-KAGYTDKQRRDF 62
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L+E + +GQ HPN++ L G + +++ E+M GSL+ L RK + + +
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGM 121
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G G+ +L ++ ++RD NIL++S+ K+SDFG+++ E +TR
Sbjct: 122 LRGIGSGMKYL--SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 179
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T+ SDV+S+G+V+ E+++
Sbjct: 180 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 28/282 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG-LQGHREWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + ++ G VAVK +N+ L+ E+L E + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L+V E M G L+++L P + + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA++ ++RD N ++ D+T K+ DFG+ + + D + + + AP
Sbjct: 144 AYL-NAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SD++SFGVVL E+ SL + L++++ + ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
D +Q ++ L C NP RP ++V L+
Sbjct: 247 DGGYLDQPD-NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 55 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L P S + + +A A G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N ++ D+T K+ DFG+ + + D + + + +P
Sbjct: 174 AYL-NANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 276
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 277 EGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 322
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 110/215 (51%), Gaps = 10/215 (4%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREW 128
F E + + ++G G FG V G + G + + VA+K L K G + R++
Sbjct: 1 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVP---GKREICVAIKTL-KAGYTDKQRRDF 56
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L+E + +GQ HPN++ L G + +++ E+M GSL+ L RK + + +
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGM 115
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
G G+ +L ++ ++RD NIL++S+ K+SDFG+++ E +TR
Sbjct: 116 LRGIGSGMKYL--SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 173
Query: 249 GT-YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T+ SDV+S+G+V+ E+++
Sbjct: 174 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 28/282 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG-LQGHREWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + ++ G VAVK +N+ L+ E+L E + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L+V E M G L+++L P + + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA++ ++RD N ++ D+T K+ DFG+ + + D + + + AP
Sbjct: 144 AYL-NAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SD++SFGVVL E+ SL + L++++ + ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
D +Q ++ L C NPK RP ++V L+
Sbjct: 247 DGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + + V VA+K +N+ R E+L E + + + ++V
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L++ E M RG L+++L P S + + +A A G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA + ++RD N + D+T K+ DFG+ + + D + + + +P
Sbjct: 139 AYL-NANK-FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SDV+SFGVVL E+ T L + L++++ + ++
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLRFVM 241
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLEP 359
+ L ++ L C NPK RP ++S + E +EP
Sbjct: 242 EGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEP 287
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
E +S R + LG+G FG V+ G + RV +K+L K G +L E
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL--------KPGNMSPEAFLQEAQ 232
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +LRH LV+L E+ +V E+M +GSL + L + L + +A A
Sbjct: 233 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 291
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+A++ ++RD + +NIL+ + K++DFGL + + +E +
Sbjct: 292 SGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLGRL-IEDNEYTARQGAKFPIKW 348
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G T +SDV+SFG++L EL T
Sbjct: 349 TAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 108/214 (50%), Gaps = 28/214 (13%)
Query: 82 SDYILGEGGFGTVYKG-YIDE---NVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
SD ++G+G FG VY G YID+ ++ +KSL ++ E +L E +
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA------FLREGLLMRG 78
Query: 138 LRHPNLVKLIGYCCEDD---HRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG--A 192
L HPN++ LIG + H LL Y M G L + P + +I+FG
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQFIRSPQRNP---TVKDLISFGLQV 133
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD----ETHVSTRVM 248
A+G+ +L AE+ ++RD N +LD +T K++DFGLA+ + + H R+
Sbjct: 134 ARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL- 190
Query: 249 GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ A E + T T +SDV+SFGV+L ELLT
Sbjct: 191 -PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 11/221 (4%)
Query: 83 DYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPN 142
D LG G FGTV KGY V ++ + N L+ E L E N + QL +P
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 431
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+V++IG CE + +LV E G L +L + V + + + G+ +L
Sbjct: 432 IVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE-- 486
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAPEYVM 260
E ++RD N+LL + + AK+SDFGL+KA + DE + + G + + APE +
Sbjct: 487 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECIN 545
Query: 261 TGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+++SDV+SFGV++ E + G+K + S+ ++++
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 11/221 (4%)
Query: 83 DYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPN 142
D LG G FGTV KGY V ++ + N L+ E L E N + QL +P
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 432
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+V++IG CE + +LV E G L +L + V + + + G+ +L
Sbjct: 433 IVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE-- 487
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAPEYVM 260
E ++RD N+LL + + AK+SDFGL+KA + DE + + G + + APE +
Sbjct: 488 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECIN 546
Query: 261 TGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+++SDV+SFGV++ E + G+K + S+ ++++
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 587
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 82 SDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
D LG G FGTV KGY V ++ + N L+ E L E N + QL +P
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 88
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+V++IG CE + +LV E G L +L + V + + + G+ +L
Sbjct: 89 YIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE- 144
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAPEYV 259
E ++RD N+LL + + AK+SDFGL+KA + DE + + G + + APE +
Sbjct: 145 -ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECI 202
Query: 260 MTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+++SDV+SFGV++ E + G+K + S+ ++++
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 82 SDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
D LG G FGTV KGY V ++ + N L+ E L E N + QL +P
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 88
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+V++IG CE + +LV E G L +L + V + + + G+ +L
Sbjct: 89 YIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE- 144
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAPEYV 259
E ++RD N+LL + + AK+SDFGL+KA + DE + + G + + APE +
Sbjct: 145 -ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECI 202
Query: 260 MTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+++SDV+SFGV++ E + G+K + S+ ++++
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 82 SDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
D LG G FGTV KGY V ++ + N L+ E L E N + QL +P
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 86
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+V++IG CE + +LV E G L +L + V + + + G+ +L
Sbjct: 87 YIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE- 142
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAPEYV 259
E ++RD N+LL + + AK+SDFGL+KA + DE + + G + + APE +
Sbjct: 143 -ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECI 200
Query: 260 MTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+++SDV+SFGV++ E + G+K + S+ ++++
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 82 SDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
D LG G FGTV KGY V ++ + N L+ E L E N + QL +P
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 68
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+V++IG CE + +LV E G L +L + V + + + G+ +L
Sbjct: 69 YIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE- 124
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAPEYV 259
E ++RD N+LL + + AK+SDFGL+KA + DE + + G + + APE +
Sbjct: 125 -ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECI 182
Query: 260 MTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+++SDV+SFGV++ E + G+K + S+ ++++
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 82 SDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
D LG G FGTV KGY V ++ + N L+ E L E N + QL +P
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 78
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+V++IG CE + +LV E G L +L + V + + + G+ +L
Sbjct: 79 YIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE- 134
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAPEYV 259
E ++RD N+LL + + AK+SDFGL+KA + DE + + G + + APE +
Sbjct: 135 -ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECI 192
Query: 260 MTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+++SDV+SFGV++ E + G+K + S+ ++++
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 82 SDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
D LG G FGTV KGY V ++ + N L+ E L E N + QL +P
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 72
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+V++IG CE + +LV E G L +L + V + + + G+ +L
Sbjct: 73 YIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE- 128
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAPEYV 259
E ++RD N+LL + + AK+SDFGL+KA + DE + + G + + APE +
Sbjct: 129 -ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECI 186
Query: 260 MTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+++SDV+SFGV++ E + G+K + S+ ++++
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 82 SDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
D LG G FGTV KGY V ++ + N L+ E L E N + QL +P
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 66
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+V++IG CE + +LV E G L +L + V + + + G+ +L
Sbjct: 67 YIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE- 122
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAPEYV 259
E ++RD N+LL + + AK+SDFGL+KA + DE + + G + + APE +
Sbjct: 123 -ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPECI 180
Query: 260 MTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+++SDV+SFGV++ E + G+K + S+ ++++
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 86 LGEGGFGTVYKGYID-ENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
LGEG FG V D E G + VAVK L E H + E+ L L H N+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQ---VAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 144 VKLIGYCCED--DHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
VK G C ED + L+ EF+ GSL+ +L + ++ ++ A KG+ +L
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYL-- 142
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE--THVSTRVMGTYGYAAPEYV 259
R ++RD N+L++S++ K+ DFGL KA E T R + Y APE +
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 260 MTGHLTARSDVYSFGVVLLELLT 282
M SDV+SFGV L ELLT
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 139/324 (42%), Gaps = 49/324 (15%)
Query: 65 VIAFSLFE---LETITKSFRSDYILGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKE 120
V AF + E E K+ LGEG FG V K R G + VAVK+L +
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKEN 64
Query: 121 GLQGH-REWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV- 178
R+ L+E N L Q+ HP+++KL G C +D LL+ E+ GSL L V
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 179 ---------------------PLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNIL 217
L+ + A+ ++G+ +L AE +++RD NIL
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNIL 182
Query: 218 LDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVL 277
+ K+SDFGL++ + D ++ + A E + T +SDV+SFGV+L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 278 LELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLA 336
E++T G P + +L L +M R +N +++ L
Sbjct: 243 WEIVTLGGNPYPGIPPERLFNL-------LKTGHRM-----ERPDN-----CSEEMYRLM 285
Query: 337 YYCLSQNPKARPLMSDVVETLEPL 360
C Q P RP+ +D+ + LE +
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 139/324 (42%), Gaps = 49/324 (15%)
Query: 65 VIAFSLFE---LETITKSFRSDYILGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKE 120
V AF + E E K+ LGEG FG V K R G + VAVK+L +
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKEN 64
Query: 121 GLQGH-REWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV- 178
R+ L+E N L Q+ HP+++KL G C +D LL+ E+ GSL L V
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 179 ---------------------PLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNIL 217
L+ + A+ ++G+ +L AE +++RD NIL
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMSLVHRDLAARNIL 182
Query: 218 LDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVL 277
+ K+SDFGL++ + D ++ + A E + T +SDV+SFGV+L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 278 LELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLA 336
E++T G P + +L L +M R +N +++ L
Sbjct: 243 WEIVTLGGNPYPGIPPERLFNL-------LKTGHRM-----ERPDN-----CSEEMYRLM 285
Query: 337 YYCLSQNPKARPLMSDVVETLEPL 360
C Q P RP+ +D+ + LE +
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 86 LGEGGFGTVYKGYID-ENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNL 143
LGEG FG V D E G + VAVK L E H + E+ L L H N+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQ---VAVKSLKPESGGNHIADLKKEIEILRNLYHENI 73
Query: 144 VKLIGYCCED--DHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
VK G C ED + L+ EF+ GSL+ +L + ++ ++ A KG+ +L
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYL-- 130
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE--THVSTRVMGTYGYAAPEYV 259
R ++RD N+L++S++ K+ DFGL KA E T R + Y APE +
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 260 MTGHLTARSDVYSFGVVLLELLT 282
M SDV+SFGV L ELLT
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 121/231 (52%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 76
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L++ + M G L +++ + L+W ++
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 130
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 131 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 188 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 237
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 121/231 (52%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L++ + M G L +++ + L+W ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 129
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 130 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 187 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 126/281 (44%), Gaps = 32/281 (11%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH---REWLTEVNF 134
+ F+ +LG+G F VY+ E++ GL+ VA+K+++K+ + + EV
Sbjct: 11 EDFKVGNLLGKGSFAGVYRA---ESIHTGLE---VAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK 194
QL+HP++++L Y + ++ LV E G + +L + P S
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIIT 123
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYA 254
G+ +LH+ +++RD SN+LL + K++DFGLA E H + + GT Y
Sbjct: 124 GMLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYI 179
Query: 255 APEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQ 314
+PE SDV+S G + LL GR D D + LN +
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD----------TDTVKNTLNK----VV 225
Query: 315 IIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE 355
+ D + + S+ A L + L +NP R +S V++
Sbjct: 226 LADYEMPSFLSIEAKD----LIHQLLRRNPADRLSLSSVLD 262
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 121/231 (52%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 73
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L++ + M G L +++ + L+W ++
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 127
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 128 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 185 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 234
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 139/324 (42%), Gaps = 49/324 (15%)
Query: 65 VIAFSLFE---LETITKSFRSDYILGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKE 120
V AF + E E K+ LGEG FG V K R G + VAVK+L +
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT--VAVKMLKEN 64
Query: 121 GLQGH-REWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV- 178
R+ L+E N L Q+ HP+++KL G C +D LL+ E+ GSL L V
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 179 ---------------------PLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNIL 217
L+ + A+ ++G+ +L AE +++RD NIL
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNIL 182
Query: 218 LDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVL 277
+ K+SDFGL++ + D ++ + A E + T +SDV+SFGV+L
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 278 LELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLA 336
E++T G P + +L L +M R +N +++ L
Sbjct: 243 WEIVTLGGNPYPGIPPERLFNL-------LKTGHRM-----ERPDN-----CSEEMYRLM 285
Query: 337 YYCLSQNPKARPLMSDVVETLEPL 360
C Q P RP+ +D+ + LE +
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 121/231 (52%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L++ + M G L +++ + L+W ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 127 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 184 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 121/231 (52%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 73
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L++ + M G L +++ + L+W ++
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI----- 127
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 128 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 185 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 234
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 121/231 (52%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L++ + M G L +++ + L+W ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 128
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 129 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 186 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 11/222 (4%)
Query: 82 SDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
D LG G FGTV KGY V ++ + N L+ E L E N + QL +P
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 72
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+V++IG CE + +LV E G L +L + V + + + G+ +L
Sbjct: 73 YIVRMIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE- 128
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY--GYAAPEYV 259
E ++RD N+LL + + AK+SDFGL+KA + DE + G + + APE +
Sbjct: 129 -ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENXYKAQTHGKWPVKWYAPECI 186
Query: 260 MTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+++SDV+SFGV++ E + G+K + S+ ++++
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 120/230 (52%), Gaps = 22/230 (9%)
Query: 80 FRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQ 137
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 79
Query: 138 LRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFGA 192
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 80 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 132
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTY 251
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 133 AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI- 189
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 239
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 133
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 134 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 189
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 129
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 130 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 187 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 127 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 184 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 129
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 130 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 187 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 127 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV-P 182
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 82
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 83 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 136
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 137 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 194 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 243
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 128
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 129 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 186 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 129
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 130 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 187 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 48/284 (16%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G+G FG V G N VAVK + + + +L E + + QLRH NLV+
Sbjct: 201 IGKGEFGDVMLGDYRGN--------KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 250
Query: 146 LIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
L+G E+ L +V E+M +GSL ++L + L + + + + +L
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN- 309
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
++RD N+L+ D AK+SDFGL K A D + + + APE +
Sbjct: 310 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKK 362
Query: 264 LTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ +SDV+SFG++L E+ + GR V + R L D + PR+E
Sbjct: 363 FSTKSDVWSFGILLWEIYSFGR--------------VPYPRIPLKD-------VVPRVEK 401
Query: 323 QYSVRAAQKACSLAYY-----CLSQNPKARPLMSDVVETLEPLQ 361
Y + A C A Y C + RP + E LE ++
Sbjct: 402 GYKMDAPD-GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 127 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 184 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 48/284 (16%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G+G FG V G N VAVK + + + +L E + + QLRH NLV+
Sbjct: 20 IGKGEFGDVMLGDYRGN--------KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 69
Query: 146 LIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
L+G E+ L +V E+M +GSL ++L + L + + + + +L
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN- 128
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
++RD N+L+ D AK+SDFGL K A D + + + APE +
Sbjct: 129 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREAA 181
Query: 264 LTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ +SDV+SFG++L E+ + GR V + R L D + PR+E
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGR--------------VPYPRIPLKD-------VVPRVEK 220
Query: 323 QYSVRAAQKACSLAYY-----CLSQNPKARPLMSDVVETLEPLQ 361
Y + A C A Y C + RP + E LE ++
Sbjct: 221 GYKMDAPD-GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 70 LFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW- 128
LF + K F +G G FG VY N V VA+K ++ G Q + +W
Sbjct: 46 LFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEV------VAIKKMSYSGKQSNEKWQ 99
Query: 129 --LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM 186
+ EV FL +LRHPN ++ G + LV E+ GS + L PL
Sbjct: 100 DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASD-LLEVHKKPLQEVEIA 157
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ GA +GLA+LH+ +I+RD K NILL KL DFG A +
Sbjct: 158 AVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANX 209
Query: 247 VMGTYGYAAPEYVMT---GHLTARSDVYSFGVVLLEL 280
+GT + APE ++ G + DV+S G+ +EL
Sbjct: 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 66
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 67 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 120
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 121 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 178 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 227
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 97
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 98 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 151
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 152 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 208
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 209 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 258
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 28/282 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG-LQGHREWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + ++ G VAVK +N+ L+ E+L E + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L+V E M G L+++L P + + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA++ ++RD N ++ D+T K+ DFG+ + + + + + AP
Sbjct: 144 AYL-NAKK-FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SD++SFGVVL E+ SL + L++++ + ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
D +Q ++ L C NPK RP ++V L+
Sbjct: 247 DGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ EF+ GSL +L +K + + KG+ +L
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-QKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 86 LGEGGFGTVYK------GYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL- 138
LG G FG V + G D ++V +K L KE L ++E+ + L
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL------MSELKIMSHLG 107
Query: 139 RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV--------PLSWATRMMIAF 190
+H N+V L+G C L++ E+ G L N L RKA PL + +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT 250
A+G+AFL A + I+RD N+LL + + AK+ DFGLA+ V
Sbjct: 168 QVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+S+G++L E+ +
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 31/270 (11%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE--WL-TEVNFLGQL-RH 140
++G G + V + + R+ A+KV+ KE + + W+ TE + Q H
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRI------YAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 141 PNLVKLIGYCCEDDHRLL-VYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
P LV L C + + RL V E++ G L H+ R+ +P A + A LA
Sbjct: 81 PFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR----FYSAEISLALN 135
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
+ ER +IYRD K N+LLDS+ KL+D+G+ K G + +T ++ GT Y APE +
Sbjct: 136 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEIL 193
Query: 260 MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPR 319
D ++ GV++ E++ GR D S P N + + Q+I
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD--------NPDQNTEDYLFQVI--- 242
Query: 320 LENQYSV--RAAQKACSLAYYCLSQNPKAR 347
LE Q + + KA S+ L+++PK R
Sbjct: 243 LEKQIRIPRSMSVKAASVLKSFLNKDPKER 272
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 86 LGEGGFGTVYK------GYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL- 138
LG G FG V + G D ++V +K L KE L ++E+ + L
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL------MSELKIMSHLG 99
Query: 139 RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV--------PLSWATRMMIAF 190
+H N+V L+G C L++ E+ G L N L RKA PL + +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT 250
A+G+AFL A + I+RD N+LL + + AK+ DFGLA+ V
Sbjct: 160 QVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+S+G++L E+ +
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 99/218 (45%), Gaps = 24/218 (11%)
Query: 70 LFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW- 128
LF + K F +G G FG VY N V VA+K ++ G Q + +W
Sbjct: 7 LFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEV------VAIKKMSYSGKQSNEKWQ 60
Query: 129 --LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM 186
+ EV FL +LRHPN ++ G + LV E+ GS + L PL
Sbjct: 61 DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASD-LLEVHKKPLQEVEIA 118
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVST 245
+ GA +GLA+LH+ +I+RD K NILL KL DFG A P +
Sbjct: 119 AVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------AN 169
Query: 246 RVMGTYGYAAPEYVMT---GHLTARSDVYSFGVVLLEL 280
+GT + APE ++ G + DV+S G+ +EL
Sbjct: 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 48/284 (16%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G+G FG V G N VAVK + + + +L E + + QLRH NLV+
Sbjct: 14 IGKGEFGDVMLGDYRGN--------KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 63
Query: 146 LIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
L+G E+ L +V E+M +GSL ++L + L + + + + +L
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN- 122
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
++RD N+L+ D AK+SDFGL K A D + + + APE +
Sbjct: 123 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKK 175
Query: 264 LTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ +SDV+SFG++L E+ + GR V + R L D + PR+E
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGR--------------VPYPRIPLKD-------VVPRVEK 214
Query: 323 QYSVRAAQKACSLAYY-----CLSQNPKARPLMSDVVETLEPLQ 361
Y + A C A Y C + RP + E LE ++
Sbjct: 215 GYKMDAPD-GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 48/284 (16%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G+G FG V G N VAVK + + + +L E + + QLRH NLV+
Sbjct: 29 IGKGEFGDVMLGDYRGN--------KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 78
Query: 146 LIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
L+G E+ L +V E+M +GSL ++L + L + + + + +L
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN- 137
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
++RD N+L+ D AK+SDFGL K A D + + + APE +
Sbjct: 138 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKK 190
Query: 264 LTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ +SDV+SFG++L E+ + GR V + R L D + PR+E
Sbjct: 191 FSTKSDVWSFGILLWEIYSFGR--------------VPYPRIPLKD-------VVPRVEK 229
Query: 323 QYSVRAAQKACSLAYY-----CLSQNPKARPLMSDVVETLEPLQ 361
Y + A C A Y C + RP + E LE ++
Sbjct: 230 GYKMDAPD-GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 15/210 (7%)
Query: 86 LGEGGFGTVYKGYIDENVR-VGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G+VYK E + V +K +PV + +E + E++ + Q P++V
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL---------QEIIKEISIMQQCDSPHVV 87
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G ++ +V E+ GS+ + + R L+ I KGL +LH +
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
I+RD K NILL+++ AKL+DFG+ AG D V+GT + APE +
Sbjct: 147 --IHRDIKAGNILLNTEGHAKLADFGV--AGQLTDXMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 265 TARSDVYSFGVVLLELLTGRKSVDKTRPSK 294
+D++S G+ +E+ G+ P +
Sbjct: 203 NCVADIWSLGITAIEMAEGKPPYADIHPMR 232
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%), Gaps = 28/282 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG-LQGHREWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + ++ G VAVK +N+ L+ E+L E + + ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L+V E M G L+++L P + + +A A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA++ ++R+ N ++ D+T K+ DFG+ + + D + + + AP
Sbjct: 145 AYL-NAKK-FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SD++SFGVVL E+ SL + L++++ + ++
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 247
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
D +Q ++ L C NP RP ++V L+
Sbjct: 248 DGGYLDQPD-NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%), Gaps = 28/282 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG-LQGHREWLTEVNFLGQLRHPNLV 144
LG+G FG VY+G + ++ G VAVK +N+ L+ E+L E + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLF--------RKATVPLSWATRMMIAFGAAKGL 196
+L+G + L+V E M G L+++L P + + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
A+L NA++ ++R+ N ++ D+T K+ DFG+ + + D + + + AP
Sbjct: 144 AYL-NAKK-FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQII 316
E + G T SD++SFGVVL E+ SL + L++++ + ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEI---------------TSLAEQPYQGLSNEQVLKFVM 246
Query: 317 DPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
D +Q ++ L C NP RP ++V L+
Sbjct: 247 DGGYLDQPD-NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 31/270 (11%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE--WL-TEVNFLGQL-RH 140
++G G + V + + R+ A+KV+ KE + + W+ TE + Q H
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRI------YAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 141 PNLVKLIGYCCEDDHRLL-VYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
P LV L C + + RL V E++ G L H+ R+ +P A + A LA
Sbjct: 66 PFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR----FYSAEISLALN 120
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
+ ER +IYRD K N+LLDS+ KL+D+G+ K G + +T ++ GT Y APE +
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEIL 178
Query: 260 MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPR 319
D ++ GV++ E++ GR D S P N + + Q+I
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD--------NPDQNTEDYLFQVI--- 227
Query: 320 LENQYSV--RAAQKACSLAYYCLSQNPKAR 347
LE Q + + KA S+ L+++PK R
Sbjct: 228 LEKQIRIPRSLSVKAASVLKSFLNKDPKER 257
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 31/270 (11%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE--WL-TEVNFLGQL-RH 140
++G G + V + + R+ A+KV+ KE + + W+ TE + Q H
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRI------YAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 141 PNLVKLIGYCCEDDHRLL-VYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
P LV L C + + RL V E++ G L H+ R+ +P A + A LA
Sbjct: 70 PFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR----FYSAEISLALN 124
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
+ ER +IYRD K N+LLDS+ KL+D+G+ K G + +T ++ GT Y APE +
Sbjct: 125 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPEIL 182
Query: 260 MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPR 319
D ++ GV++ E++ GR D S P N + + Q+I
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD--------NPDQNTEDYLFQVI--- 231
Query: 320 LENQYSV--RAAQKACSLAYYCLSQNPKAR 347
LE Q + + KA S+ L+++PK R
Sbjct: 232 LEKQIRIPRSLSVKAASVLKSFLNKDPKER 261
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 70
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 129
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 130 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 75
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 135 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 78
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 137
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 138 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 69
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 129 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 76
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 135
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 136 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 102
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 161
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 162 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
+GEG FG V++ + ++ VAVK+L +E + ++ E + + +PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTM-VAVKMLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFR-----------------KATV------PLS 181
KL+G C L++E+M G L N R +A V PLS
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 182 WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET 241
A ++ IA A G+A+L +ER ++RD T N L+ + K++DFGL++ D
Sbjct: 173 CAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 242 HVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE + T SDV+++GVVL E+ +
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 77
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 136
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 137 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKV--LNKEGLQGHREWLTEVNFLGQLRHPN 142
ILGEG FG+V +G + + LK VAVK L+ + E+L+E + HPN
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLK---VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 143 LVKLIGYCCEDDHR-----LLVYEFMFRGSLENHLF--RKATVPLSWATRMMIAFGAAKG 195
+++L+G C E + +++ FM G L +L R T P + ++ F
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 196 LAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
L + + R ++RD N +L D T ++DFGL+K GD + A
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLT 282
E + T++SDV++FGV + E+ T
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 69
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 70 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 123
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
A+G+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 124 -AEGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 180
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 181 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 126/270 (46%), Gaps = 31/270 (11%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE--WL-TEVNFLGQL-RH 140
++G G + V + + R+ A++V+ KE + + W+ TE + Q H
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRI------YAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 141 PNLVKLIGYCCEDDHRLL-VYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
P LV L C + + RL V E++ G L H+ R+ +P A + A LA
Sbjct: 113 PFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR----FYSAEISLALN 167
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
+ ER +IYRD K N+LLDS+ KL+D+G+ K G + +T ++ GT Y APE +
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEIL 225
Query: 260 MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPR 319
D ++ GV++ E++ GR D S P N + + Q+I
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD--------NPDQNTEDYLFQVI--- 274
Query: 320 LENQYSV--RAAQKACSLAYYCLSQNPKAR 347
LE Q + + KA S+ L+++PK R
Sbjct: 275 LEKQIRIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +L G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L++ + M G L +++ + L+W ++
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 133
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 134 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 191 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 86 LGEGGFGTVYK------GYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL- 138
LG G FG V + G D ++V +K L KE L ++E+ + L
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL------MSELKIMSHLG 107
Query: 139 RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV----PL------SWATRMMI 188
+H N+V L+G C L++ E+ G L N L RK+ V P + +TR ++
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 189 AFGA--AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
F + A+G+AFL A + I+RD N+LL + + AK+ DFGLA+ V
Sbjct: 168 HFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+S+G++L E+ +
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 76
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L++ + M G L +++ + L+W ++
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 130
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFG AK G + E H +
Sbjct: 131 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 188 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 237
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L++ + M G L +++ + L+W ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 128
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFG AK G + E H +
Sbjct: 129 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 186 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +L G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 133
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 134 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 191 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +L G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 127 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 184 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+ L + + ++E L E +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIMELREATSPKANKEILDEAYVMA 106
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 107 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 160
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFGLAK G + E H +
Sbjct: 161 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 217
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 218 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 267
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L++ + M G L +++ + L+W ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 128
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFG AK G + E H +
Sbjct: 129 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-P 184
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 86 LGEGGFGTVYK------GYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL- 138
LG G FG V + G D ++V +K L KE L ++E+ + L
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL------MSELKIMSHLG 107
Query: 139 RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV----PL------SWATRMMI 188
+H N+V L+G C L++ E+ G L N L RK+ V P + +TR ++
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 189 AFGA--AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
F + A+G+AFL A + I+RD N+LL + + AK+ DFGLA+ V
Sbjct: 168 HFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+S+G++L E+ +
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 133
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFG AK G + E H +
Sbjct: 134 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-P 189
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 128
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFG AK G + E H +
Sbjct: 129 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV-P 184
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLG 136
F+ +LG G FGTVYKG +I E +V +PVA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-----ATVPLSWATRMMIAFG 191
+ +P++ +L+G C +L+ + M G L +++ + L+W ++
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI----- 126
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGT 250
AKG+ +L + R +++RD N+L+ + K++DFG AK G + E H +
Sbjct: 127 -AKGMNYLED--RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 183
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVD 300
+ A E ++ T +SDV+S+GV + EL+T G K D S+ S+++
Sbjct: 184 -KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 23/291 (7%)
Query: 58 NAVLYTHVIAFSLFELETITK-SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKV 116
+++ + + + E + +TK +FR +LG+GGFG V + G ++
Sbjct: 163 DSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRA---TGKMYACKKLEK 219
Query: 117 LNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKA 176
+ +G L E L ++ +V L D LV M G L+ H++
Sbjct: 220 KRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG 279
Query: 177 TVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGP 236
A + A GL LH ER ++YRD K NILLD ++SD GLA P
Sbjct: 280 QAGFPEARAVFYAAEICCGLEDLHR-ER-IVYRDLKPENILLDDHGHIRISDLGLAVHVP 337
Query: 237 QGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQ 296
+G + RV GT GY APE V T D ++ G +L E++ G+ +
Sbjct: 338 EGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR------ 388
Query: 297 SLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKAR 347
K KR+ ++ + + +YS R + +A SL L ++P R
Sbjct: 389 --------KKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 23/291 (7%)
Query: 58 NAVLYTHVIAFSLFELETITK-SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKV 116
+++ + + + E + +TK +FR +LG+GGFG V + G ++
Sbjct: 163 DSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRAT---GKMYACKKLEK 219
Query: 117 LNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKA 176
+ +G L E L ++ +V L D LV M G L+ H++
Sbjct: 220 KRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMG 279
Query: 177 TVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGP 236
A + A GL LH ER ++YRD K NILLD ++SD GLA P
Sbjct: 280 QAGFPEARAVFYAAEICCGLEDLHR-ER-IVYRDLKPENILLDDHGHIRISDLGLAVHVP 337
Query: 237 QGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQ 296
+G + RV GT GY APE V T D ++ G +L E++ G+ +
Sbjct: 338 EGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR------ 388
Query: 297 SLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKAR 347
K KR+ ++ + + +YS R + +A SL L ++P R
Sbjct: 389 --------KKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 15/221 (6%)
Query: 80 FRSDYILGEGGFGTVYKGYI---DENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFL 135
R +LG G FGTVYKG ENV++ PVA+KVL + + ++E L E +
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKI-----PVAIKVLRENTSPKANKEILDEAYVM 73
Query: 136 GQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKG 195
+ P + +L+G C +L V + M G L +H+ R+ L + AKG
Sbjct: 74 AGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHV-RENRGRLGSQDLLNWCMQIAKG 131
Query: 196 LAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
+++L + +++RD N+L+ S K++DFGLA+ + + + + A
Sbjct: 132 MSYLEDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKE 295
E ++ T +SDV+S+GV + EL+T G K D P++E
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGI-PARE 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNF 134
K R LG+G FG V +G D K++ VAVK L + L + +++ EVN
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAP---SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK 194
+ L H NL++L G ++ V E GSL + L RK T A A+
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAE 126
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT-YGY 253
G+ +L + + I+RD N+LL + K+ DFGL +A PQ D+ +V + +
Sbjct: 127 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + T + SD + FGV L E+ T
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 72
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L +K + + KG+ +L
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYL 131
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETH-VSTRVMGTYGYAAPEY 258
+ I+R+ T NIL++++ K+ DFGL K PQ E + V + APE
Sbjct: 132 --GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG+G FG+V Y D V VAVK L + R++ E+ L L+H
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEV------VAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+VK G C R L+ E++ GSL ++L A + + KG+ +L
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAE-RIDHIKLLQYTSQICKGMEYL 133
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDE-THVSTRVMGTYGYAAPEY 258
+ I+RD T NIL++++ K+ DFGL K PQ E V + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 259 VMTGHLTARSDVYSFGVVLLELLT 282
+ + SDV+SFGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG+G FG VYK E S+ A KV++ + + +++ E++ L HPN+VK
Sbjct: 45 LGDGAFGKVYKAQNKET------SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+ +++ ++ EF G+++ + + PL+ + ++ L +LH+
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHD--NK 155
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
+I+RD K NIL D KL+DFG++ + + S +GT + APE VM
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSK 213
Query: 266 AR-----SDVYSFGVVLLEL 280
R +DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G +G VY G + SL VAVK L ++ ++ E+L E + +++HPNLV+
Sbjct: 40 LGGGQYGEVYVGVWKKY------SLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 92
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+G C + +V E+M G+L ++L ++ + +A + + +L ++
Sbjct: 93 LLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE--KKN 150
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
I+RD N L+ ++ K++DFGL++ GD + APE + +
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFS 209
Query: 266 ARSDVYSFGVVLLELLT 282
+SDV++FGV+L E+ T
Sbjct: 210 IKSDVWAFGVLLWEIAT 226
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG+G FG VYK E S+ A KV++ + + +++ E++ L HPN+VK
Sbjct: 45 LGDGAFGKVYKAQNKET------SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+ +++ ++ EF G+++ + + PL+ + ++ L +LH+
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHD--NK 155
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
+I+RD K NIL D KL+DFG++ + + S +GT + APE VM
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSK 213
Query: 266 AR-----SDVYSFGVVLLEL 280
R +DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+LG+G FG K E V + +K L + + R +L EV + L HPN++
Sbjct: 17 VLGKGCFGQAIKVTHRETGEV------MVMKELIRFDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K IG +D + E++ G+L + + W+ R+ A A G+A+LH+
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN- 128
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLA------KAGPQG-------DETHVSTRVMGTY 251
+I+RD + N L+ + ++DFGLA K P+G D T V+G
Sbjct: 129 -IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNP 186
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVD 288
+ APE + + DV+SFG+VL E++ GR + D
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNF 134
K R LG+G FG V +G D K++ VAVK L + L + +++ EVN
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAP---SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK 194
+ L H NL++L G ++ V E GSL + L RK T A A+
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAE 122
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT-YGY 253
G+ +L + + I+RD N+LL + K+ DFGL +A PQ D+ +V + +
Sbjct: 123 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + T + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNF 134
K R LG+G FG V +G D K++ VAVK L + L + +++ EVN
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSG---KTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK 194
+ L H NL++L G ++ V E GSL + L RK T A A+
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAE 132
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT-YGY 253
G+ +L + + I+RD N+LL + K+ DFGL +A PQ D+ +V + +
Sbjct: 133 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + T + SD + FGV L E+ T
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNF 134
K R LG+G FG V +G D K++ VAVK L + L + +++ EVN
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAP---SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK 194
+ L H NL++L G ++ V E GSL + L RK T A A+
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAE 122
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT-YGY 253
G+ +L + + I+RD N+LL + K+ DFGL +A PQ D+ +V + +
Sbjct: 123 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + T + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNF 134
K R LG+G FG V +G D K++ VAVK L + L + +++ EVN
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAP---SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK 194
+ L H NL++L G ++ V E GSL + L RK T A A+
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAE 126
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT-YGY 253
G+ +L + + I+RD N+LL + K+ DFGL +A PQ D+ +V + +
Sbjct: 127 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + T + SD + FGV L E+ T
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG+G FG VYK E S+ A KV++ + + +++ E++ L HPN+VK
Sbjct: 45 LGDGAFGKVYKAQNKET------SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L+ +++ ++ EF G+++ + + PL+ + ++ L +LH+
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHD--NK 155
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLT 265
+I+RD K NIL D KL+DFG++ + +GT + APE VM
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX--IQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 266 AR-----SDVYSFGVVLLEL 280
R +DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 86 LGEGGFGTVYK------GYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL- 138
LG G FG V + G D ++V +K L KE L ++E+ + L
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL------MSELKIMSHLG 107
Query: 139 RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWA------------TRM 186
+H N+V L+G C L++ E+ G L N L RK L ++ +R
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 187 MIAFGA--AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 244
++ F + A+G+AFL A + I+RD N+LL + + AK+ DFGLA+ V
Sbjct: 168 LLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+S+G++L E+ +
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 31/271 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
+G+G FG V+KG + +V VA+K+++ +E + E+ L Q P +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKV------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G +D ++ E++ GS + L PL I KGL +LH+ ++
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
I+RD K +N+LL KL+DFG+A G D +GT + APE +
Sbjct: 141 --IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 265 TARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQY 324
+++D++S G+ +EL G + P K L+ PK N P LE Y
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLI----PKNN---------PPTLEGNY 243
Query: 325 SVRAAQKACSLAYYCLSQNPKARPLMSDVVE 355
S + CL++ P RP ++++
Sbjct: 244 S----KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNF 134
K R LG+G FG V +G D K++ VAVK L + L + +++ EVN
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSG---KTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK 194
+ L H NL++L G ++ V E GSL + L RK T A A+
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAE 132
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT-YGY 253
G+ +L + + I+RD N+LL + K+ DFGL +A PQ D+ V + +
Sbjct: 133 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + T + SD + FGV L E+ T
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNF 134
K R LG+G FG V +G D K++ VAVK L + L + +++ EVN
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAP---SGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK 194
+ L H NL++L G ++ V E GSL + L RK T A A+
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAE 122
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT-YGY 253
G+ +L + + I+RD N+LL + K+ DFGL +A PQ D+ V + +
Sbjct: 123 GMGYLES--KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + T + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 31/271 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
+G+G FG V+KG + +V VA+K+++ +E + E+ L Q P +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKV------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G +D ++ E++ GS + L PL I KGL +LH+ ++
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
I+RD K +N+LL KL+DFG+A G D +GT + APE +
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 265 TARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQY 324
+++D++S G+ +EL G + P K L+ PK N P LE Y
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLI----PKNN---------PPTLEGNY 228
Query: 325 SVRAAQKACSLAYYCLSQNPKARPLMSDVVE 355
S + CL++ P RP ++++
Sbjct: 229 S----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 54
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 169
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 31/271 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
+G+G FG V+KG + +V VA+K+++ +E + E+ L Q P +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKV------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G +D ++ E++ GS + L PL I KGL +LH+ ++
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
I+RD K +N+LL KL+DFG+A G D +GT + APE +
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 265 TARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQY 324
+++D++S G+ +EL G + P K L+ PK N P LE Y
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLI----PKNN---------PPTLEGNY 228
Query: 325 SVRAAQKACSLAYYCLSQNPKARPLMSDVVE 355
S + CL++ P RP ++++
Sbjct: 229 S----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 53
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T Y
Sbjct: 113 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 168
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 53
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T Y
Sbjct: 113 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 168
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 31/271 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
+G+G FG V+KG + +V VA+K+++ +E + E+ L Q P +
Sbjct: 35 IGKGSFGEVFKGIDNRTQKV------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G +D ++ E++ GS + L PL I KGL +LH+ ++
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
I+RD K +N+LL KL+DFG+A G D +GT + APE +
Sbjct: 146 --IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 265 TARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQY 324
+++D++S G+ +EL G + P K L+ PK N P LE Y
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLI----PKNN---------PPTLEGNY 248
Query: 325 SVRAAQKACSLAYYCLSQNPKARPLMSDVVE 355
S + CL++ P RP ++++
Sbjct: 249 S----KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 58
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T Y
Sbjct: 118 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 173
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL-KSLP-----VAVKVLNKEGLQGH-REWLTEVNFLGQL 138
LGEG FG V +GL K P VAVK+L + + + ++E+ + +
Sbjct: 36 LGEGAFGQVVLAEA-----IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 90
Query: 139 -RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWA 183
+H N++ L+G C +D ++ E+ +G+L +L F + P LS
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
+ A+ A+G+ +L A + I+RD N+L+ D K++DFGLA+ D
Sbjct: 151 DLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+T + APE + T +SDV+SFGV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 54
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 169
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 170 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 61
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T Y
Sbjct: 121 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 176
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 55
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T Y
Sbjct: 115 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 170
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 54
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 169
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG FG V Y +V LK + KVL K +QG E E+++L LRHP+++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKI--INKKVLAKSDMQGRIE--REISYLRLLRHPHII 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
KL D ++V E+ L +++ ++ + A R +A H
Sbjct: 68 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--- 123
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+++RD K N+LLD K++DFGL+ G+ S G+ YAAPE V++G L
Sbjct: 124 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKL 178
Query: 265 TA--RSDVYSFGVVLLELLTGRKSVD 288
A DV+S GV+L +L R D
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 61
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T Y
Sbjct: 121 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 176
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG FG V Y +V LK + KVL K +QG E E+++L LRHP+++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKI--INKKVLAKSDMQGRIE--REISYLRLLRHPHII 76
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
KL D ++V E+ L +++ ++ + A R +A H
Sbjct: 77 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--- 132
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+++RD K N+LLD K++DFGL+ G+ S G+ YAAPE V++G L
Sbjct: 133 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKL 187
Query: 265 TA--RSDVYSFGVVLLELLTGRKSVD 288
A DV+S GV+L +L R D
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG FG V Y +V LK + KVL K +QG E E+++L LRHP+++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKI--INKKVLAKSDMQGRIE--REISYLRLLRHPHII 77
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
KL D ++V E+ L +++ ++ + A R +A H
Sbjct: 78 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--- 133
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+++RD K N+LLD K++DFGL+ G+ S G+ YAAPE V++G L
Sbjct: 134 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKL 188
Query: 265 TA--RSDVYSFGVVLLELLTGRKSVD 288
A DV+S GV+L +L R D
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 26/216 (12%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 57
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKAT----VPLSWATRMMIA 189
L +L HPN+VKL+ ++ LV+EF+ S++ F A+ +PL +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYL-- 112
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG 249
F +GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V
Sbjct: 113 FQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 250 TYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
T Y APE ++ + + D++S G + E++T R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 20/204 (9%)
Query: 85 ILGE-GGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
I+GE G FG VYK E S+ A KV++ + + +++ E++ L HPN+
Sbjct: 16 IIGELGDFGKVYKAQNKET------SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 69
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL+ +++ ++ EF G+++ + + PL+ + ++ L +LH+ +
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHDNK 128
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR--VMGTYGYAAPEYVMT 261
+I+RD K NIL D KL+DFG++ + T + R +GT + APE VM
Sbjct: 129 --IIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 262 GHLTAR-----SDVYSFGVVLLEL 280
R +DV+S G+ L+E+
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 26/216 (12%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 55
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKAT----VPLSWATRMMIA 189
L +L HPN+VKL+ ++ LV+EF+ S++ F A+ +PL +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYL-- 110
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG 249
F +GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V
Sbjct: 111 FQLLQGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 166
Query: 250 TYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
T Y APE ++ + + D++S G + E++T R
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG FG V Y +V LK + KVL K +QG E E+++L LRHP+++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKI--INKKVLAKSDMQGRIE--REISYLRLLRHPHII 71
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
KL D ++V E+ L +++ ++ + A R +A H
Sbjct: 72 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK--- 127
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+++RD K N+LLD K++DFGL+ G+ S G+ YAAPE V++G L
Sbjct: 128 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKL 182
Query: 265 TA--RSDVYSFGVVLLELLTGRKSVD 288
A DV+S GV+L +L R D
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 83 DYILGE----GGFGTVYKGYID-ENVRVGLKS----LPVAVKVLNKEGLQGHREWLTEVN 133
D +LGE G FG V+ G + +N V +KS LP +K ++L E
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA----------KFLQEAR 164
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L Q HPN+V+LIG C + +V E + G L R L T + + AA
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAA 223
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+ +L + + I+RD N L+ K+SDFG+++ G +
Sbjct: 224 AGMEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW 281
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G ++ SDV+SFG++L E +
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 37/221 (16%)
Query: 89 GGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIG 148
G FG V+K + N V +K P+ +K+ Q EV L ++H N+++ IG
Sbjct: 35 GRFGCVWKAQL-LNEYVAVKIFPIQ----DKQSWQNE----YEVYSLPGMKHENILQFIG 85
Query: 149 Y----CCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH---- 200
D L+ F +GSL + F KA V +SW IA A+GLA+LH
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSD--FLKANV-VSWNELCHIAETMARGLAYLHEDIP 142
Query: 201 ---NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLA---KAGPQGDETHVSTRVMGTYGY 253
+ +P I +RD K+ N+LL ++ TA ++DFGLA +AG +TH +GT Y
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ---VGTRRY 199
Query: 254 AAPEYVMTGHLT------ARSDVYSFGVVLLELLTGRKSVD 288
APE V+ G + R D+Y+ G+VL EL + + D
Sbjct: 200 MAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 21 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ RG + L + + + A L++ H+
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL--ANALSYCHS- 131
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 132 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 186
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 228
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 277
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 31/217 (14%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG-HREWLTEVNFLGQL-RHPN 142
++GEG FG V K I ++ GL+ + A+K + + + HR++ E+ L +L HPN
Sbjct: 22 VIGEGNFGQVLKARIKKD---GLR-MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 77
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV---------------PLSWATRMM 187
++ L+G C + L E+ G+L + L RK+ V LS +
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
A A+G+ +L +++ I+RD NIL+ +Y AK++DFGL++ G E +V +
Sbjct: 137 FAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KT 189
Query: 248 MGTYG--YAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
MG + A E + T SDV+S+GV+L E+++
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 31/217 (14%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG-HREWLTEVNFLGQL-RHPN 142
++GEG FG V K I ++ GL+ + A+K + + + HR++ E+ L +L HPN
Sbjct: 32 VIGEGNFGQVLKARIKKD---GLR-MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV---------------PLSWATRMM 187
++ L+G C + L E+ G+L + L RK+ V LS +
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
A A+G+ +L +++ I+RD NIL+ +Y AK++DFGL++ G E +V +
Sbjct: 147 FAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KT 199
Query: 248 MGTYG--YAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
MG + A E + T SDV+S+GV+L E+++
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 26/216 (12%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 57
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKAT----VPLSWATRMMIA 189
L +L HPN+VKL+ ++ LV+EF+ S++ F A+ +PL +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYL-- 112
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG 249
F +GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V
Sbjct: 113 FQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 250 TYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
T Y APE ++ + + D++S G + E++T R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+GEG +G VYK + V LK + + + EG+ + E++ L +L HPN+V
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAE---DEGIPSTA--IREISLLKELHHPNIVS 83
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
LI + LV+EFM + L+ L T L + + + +G+A H +
Sbjct: 84 LIDVIHSERCLTLVFEFMEK-DLKKVLDENKT-GLQDSQIKIYLYQLLRGVAHCH--QHR 139
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM-TGHL 264
+++RD K N+L++SD KL+DFGLA+A G T + T Y AP+ +M +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 265 TARSDVYSFGVVLLELLTGR 284
+ D++S G + E++TG+
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 110/216 (50%), Gaps = 26/216 (12%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 56
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKAT----VPLSWATRMMIA 189
L +L HPN+VKL+ ++ LV+EF+ S++ F A+ +PL +
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYL-- 111
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG 249
F +GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V
Sbjct: 112 FQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 250 TYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
T Y APE ++ + + D++S G + E++T R
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 84 YILGEG-GFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR---EWLTEVNFLGQLR 139
Y+LG+ G GT K I E+ G K VAVK+LN++ ++ + E+ L R
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHK---VAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
HP+++KL +V E++ G L +++ + V A R+ +A
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H V++RD K N+LLD+ AK++DFGL+ G+ S G+ YAAPE V
Sbjct: 130 HM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-V 181
Query: 260 MTGHLTA--RSDVYSFGVVLLELLTGRKSVD 288
++G L A D++S GV+L LL G D
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+GEG +G VYK + V LK + + + EG+ + E++ L +L HPN+V
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAE---DEGIPSTA--IREISLLKELHHPNIVS 83
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
LI + LV+EFM + L+ L T L + + + +G+A H +
Sbjct: 84 LIDVIHSERCLTLVFEFMEK-DLKKVLDENKT-GLQDSQIKIYLYQLLRGVAHCH--QHR 139
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM-TGHL 264
+++RD K N+L++SD KL+DFGLA+A G T + T Y AP+ +M +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 265 TARSDVYSFGVVLLELLTGR 284
+ D++S G + E++TG+
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 86 LGEGGFGTVYK------GYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL- 138
LG G FG V + G D ++V +K L KE L ++E+ + L
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL------MSELKIMSHLG 92
Query: 139 RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV-------------------- 178
+H N+V L+G C L++ E+ G L N L RKA
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 179 -PLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQ 237
PL + + A+G+AFL A + I+RD N+LL + + AK+ DFGLA+
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 238 GDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
V + APE + T +SDV+S+G++L E+ +
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 54
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GL+F H+ V++RD K N+L++++ KL+DFGLA+A G T + T Y
Sbjct: 114 QGLSFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 169
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 83 DYILGE----GGFGTVYKGYID-ENVRVGLKS----LPVAVKVLNKEGLQGHREWLTEVN 133
D +LGE G FG V+ G + +N V +KS LP +K ++L E
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA----------KFLQEAR 164
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L Q HPN+V+LIG C + +V E + G L R L T + + AA
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAA 223
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
G+ +L + + I+RD N L+ K+SDFG+++ G +
Sbjct: 224 AGMEYLES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW 281
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLT 282
APE + G ++ SDV+SFG++L E +
Sbjct: 282 TAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 54
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L++ + A + F
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 85 ILGEGGFGTVY--KGYIDENVR--VGLKSLPVA-VKVLNKEGLQGHREWLTEVNFLGQLR 139
+LG+G FG V+ K + R +K L A +KV ++ + R+ L EVN
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN------ 84
Query: 140 HPNLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAF 198
HP +VKL Y + + +L L+ +F+ G L F + + + + + + A LA
Sbjct: 85 HPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
H +IYRD K NILLD + KL+DFGL+K ++ S GT Y APE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEV 197
Query: 259 VMTGHLTARSDVYSFGVVLLELLTG 283
V T +D +SFGV++ E+LTG
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPN 142
+LG+G FG V K + + AVKV+NK + L EV L +L HPN
Sbjct: 29 MLGKGSFGEVLK------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
++KL + +V E G L + + ++ A R++ + G+ ++H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMH-- 138
Query: 203 ERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
+ +++RD K NILL+S D K+ DFGL+ Q T + R+ GT Y APE V
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIAPE-V 194
Query: 260 MTGHLTARSDVYSFGVVLLELLTG 283
+ G + DV+S GV+L LL+G
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSG 218
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 85 ILGEGGFGTVY--KGYIDENVR--VGLKSLPVA-VKVLNKEGLQGHREWLTEVNFLGQLR 139
+LG+G FG V+ K + R +K L A +KV ++ + R+ L EVN
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN------ 85
Query: 140 HPNLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAF 198
HP +VKL Y + + +L L+ +F+ G L F + + + + + + A LA
Sbjct: 86 HPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
H +IYRD K NILLD + KL+DFGL+K D + GT Y APE
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEV 198
Query: 259 VMTGHLTARSDVYSFGVVLLELLTG 283
V T +D +SFGV++ E+LTG
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 85 ILGEGGFGTVY--KGYIDENVR--VGLKSLPVA-VKVLNKEGLQGHREWLTEVNFLGQLR 139
+LG+G FG V+ K + R +K L A +KV ++ + R+ L EVN
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN------ 84
Query: 140 HPNLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAF 198
HP +VKL Y + + +L L+ +F+ G L F + + + + + + A LA
Sbjct: 85 HPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
H +IYRD K NILLD + KL+DFGL+K D + GT Y APE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEV 197
Query: 259 VMTGHLTARSDVYSFGVVLLELLTG 283
V T +D +SFGV++ E+LTG
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 9/199 (4%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQLRHPNL 143
ILGEG FG VY+G + + + VAVK K+ L ++++E + L HP++
Sbjct: 31 ILGEGFFGEVYEGVYTNHKG---EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKLIG E++ ++ E G L ++L R L T ++ + K +A+L +
Sbjct: 88 VKLIGII-EEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLESIN 145
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
++RD NIL+ S KL DFGL++ D S + + +PE +
Sbjct: 146 --CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRR 202
Query: 264 LTARSDVYSFGVVLLELLT 282
T SDV+ F V + E+L+
Sbjct: 203 FTTASDVWMFAVCMWEILS 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 9/199 (4%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQLRHPNL 143
ILGEG FG VY+G + + + VAVK K+ L ++++E + L HP++
Sbjct: 15 ILGEGFFGEVYEGVYTNHKG---EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKLIG E++ ++ E G L ++L R L T ++ + K +A+L +
Sbjct: 72 VKLIGII-EEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLESIN 129
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
++RD NIL+ S KL DFGL++ D S + + +PE +
Sbjct: 130 --CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRR 186
Query: 264 LTARSDVYSFGVVLLELLT 282
T SDV+ F V + E+L+
Sbjct: 187 FTTASDVWMFAVCMWEILS 205
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 56
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 116 QGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 56
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 116 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 54
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 54
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWL-TEVNFLGQL-RHPN 142
+LG G FG V + G+ S+ VAVK+L ++ RE L +E+ + QL H N
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGV-SIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHL------FRKATVP---------------LS 181
+V L+G C L++E+ G L N+L F + + L+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 182 WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET 241
+ + A+ AKG+ FL + ++RD N+L+ K+ DFGLA+
Sbjct: 171 FEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 242 HVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
V + APE + G T +SDV+S+G++L E+ +
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 9/199 (4%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQLRHPNL 143
ILGEG FG VY+G + + + VAVK K+ L ++++E + L HP++
Sbjct: 19 ILGEGFFGEVYEGVYTNHKG---EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKLIG E++ ++ E G L ++L R L T ++ + K +A+L +
Sbjct: 76 VKLIGII-EEEPTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLESIN 133
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
++RD NIL+ S KL DFGL++ D S + + +PE +
Sbjct: 134 --CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINFRR 190
Query: 264 LTARSDVYSFGVVLLELLT 282
T SDV+ F V + E+L+
Sbjct: 191 FTTASDVWMFAVCMWEILS 209
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 55
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 115 QGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 53
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 113 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 168
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 55
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 115 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 54
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 57
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 117 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 56
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 116 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 171
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 54
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 114 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 169
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 53
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 113 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 168
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 57
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLL 116
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 117 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 118/282 (41%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 17 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 127
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T +S GT Y PE +
Sbjct: 128 -KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDYLPPEMIEGR 182
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 224
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 264
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 57
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 117 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 71 FELETITKSFRSDYILGEGGFGTVYKGYIDENVR--VGLKSLPVAVKVLNKEGLQGHREW 128
++++ K + LGEG F TVYK D+N V +K + + + K+G+ +R
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKAR-DKNTNQIVAIKKIKLGHRSEAKDGI--NRTA 59
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L E+ L +L HPN++ L+ + LV++FM LE + + ++ L+ +
Sbjct: 60 LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEV-IIKDNSLVLTPSHIKAY 117
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
+GL +LH + +++RD K +N+LLD + KL+DFGLAK+ G +
Sbjct: 118 MLMTLQGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQV 173
Query: 249 GTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELL 281
T Y APE + + D+++ G +L ELL
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 84 YILGEG-GFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR---EWLTEVNFLGQLR 139
Y+LG+ G GT K I E+ G K VAVK+LN++ ++ + E+ L R
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHK---VAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
HP+++KL +V E++ G L +++ + V A R+ +A
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H V++RD K N+LLD+ AK++DFGL+ G+ S G+ YAAPE V
Sbjct: 130 HM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-V 181
Query: 260 MTGHLTA--RSDVYSFGVVLLELLTGRKSVD 288
++G L A D++S GV+L LL G D
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 55
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 115 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 170
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 58
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 118 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 173
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE-----WLTEV 132
++F+ +GEG +G VYK N G V L K L E + E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA---RNKLTG------EVVALXKIRLDTETEGVPSTAIREI 53
Query: 133 NFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA 192
+ L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYG 252
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T
Sbjct: 113 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 168
Query: 253 YAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
Y APE ++ + + D++S G + E++T R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE-----WLTEV 132
++F+ +GEG +G VYK N G V L K L E + E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA---RNKLTG------EVVALXKIRLDTETEGVPSTAIREI 52
Query: 133 NFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA 192
+ L +L HPN+VKL+ ++ LV+EF+ + L+ + A + F
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYG 252
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T
Sbjct: 112 LQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLW 167
Query: 253 YAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
Y APE ++ + + D++S G + E++T R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 21 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ RG + L + + + A L++ H+
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL--ANALSYCHS- 131
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P + GT Y PE +
Sbjct: 132 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEMIEGR 186
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 228
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 277
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 31/217 (14%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG-HREWLTEVNFLGQL-RHPN 142
++GEG FG V K I ++ GL+ + A+K + + + HR++ E+ L +L HPN
Sbjct: 29 VIGEGNFGQVLKARIKKD---GLR-MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 84
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATV---------------PLSWATRMM 187
++ L+G C + L E+ G+L + L RK+ V LS +
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
A A+G+ +L +++ I+R+ NIL+ +Y AK++DFGL++ G E +V +
Sbjct: 144 FAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK-KT 196
Query: 248 MGTYG--YAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
MG + A E + T SDV+S+GV+L E+++
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL-KSLP-----VAVKVLNKEGLQGH-REWLTEVNFLGQL 138
LGEG FG V +GL K P VAVK+L + + + ++E+ + +
Sbjct: 21 LGEGAFGQVVLAEA-----IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 75
Query: 139 -RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWA 183
+H N++ L+G C +D ++ E+ +G+L +L + + P LS
Sbjct: 76 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
+ A+ A+G+ +L A + I+RD N+L+ D K++DFGLA+ D
Sbjct: 136 DLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+T + APE + T +SDV+SFGV+L E+ T
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL-KSLP-----VAVKVLNKEGLQGH-REWLTEVNFLGQL 138
LGEG FG V +GL K P VAVK+L + + + ++E+ + +
Sbjct: 25 LGEGAFGQVVLAEA-----IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 79
Query: 139 -RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWA 183
+H N++ L+G C +D ++ E+ +G+L +L + + P LS
Sbjct: 80 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
+ A+ A+G+ +L A + I+RD N+L+ D K++DFGLA+ D
Sbjct: 140 DLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+T + APE + T +SDV+SFGV+L E+ T
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 42 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 152
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 153 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 207
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 249
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 298
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 17/211 (8%)
Query: 84 YILGEG-GFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR---EWLTEVNFLGQLR 139
YILG+ G GT K + ++ G K VAVK+LN++ ++ + E+ L R
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHK---VAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
HP+++KL +V E++ G L +++ + + + R+ + G+ +
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS--GVDYC 132
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H V++RD K N+LLD+ AK++DFGL+ G+ S G+ YAAPE V
Sbjct: 133 HR--HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-V 186
Query: 260 MTGHLTA--RSDVYSFGVVLLELLTGRKSVD 288
++G L A D++S GV+L LL G D
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL-KSLP-----VAVKVLNKEGLQGH-REWLTEVNFLGQL 138
LGEG FG V +GL K P VAVK+L + + + ++E+ + +
Sbjct: 28 LGEGAFGQVVLAEA-----IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 82
Query: 139 -RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWA 183
+H N++ L+G C +D ++ E+ +G+L +L + + P LS
Sbjct: 83 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
+ A+ A+G+ +L A + I+RD N+L+ D K++DFGLA+ D
Sbjct: 143 DLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+T + APE + T +SDV+SFGV+L E+ T
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 16 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 126
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 127 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GTLDYLPPEMIEGR 181
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 223
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 272
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL-KSLP-----VAVKVLNKEGLQGH-REWLTEVNFLGQL 138
LGEG FG V +GL K P VAVK+L + + + ++E+ + +
Sbjct: 29 LGEGAFGQVVLAEA-----IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 83
Query: 139 -RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWA 183
+H N++ L+G C +D ++ E+ +G+L +L + + P LS
Sbjct: 84 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
+ A+ A+G+ +L A + I+RD N+L+ D K++DFGLA+ D
Sbjct: 144 DLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+T + APE + T +SDV+SFGV+L E+ T
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL-KSLP-----VAVKVLNKEGLQGH-REWLTEVNFLGQL 138
LGEG FG V +GL K P VAVK+L + + + ++E+ + +
Sbjct: 36 LGEGAFGQVVLAEA-----IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 90
Query: 139 -RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWA 183
+H N++ L+G C +D ++ E+ +G+L +L + + P LS
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
+ A+ A+G+ +L A + I+RD N+L+ D K++DFGLA+ D
Sbjct: 151 DLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+T + APE + T +SDV+SFGV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R + +A+KVL K L+ + EV LRHPN
Sbjct: 13 LGKGKFGNVYLA------REKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 123
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 124 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 178
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 220
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 221 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 260
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 13/227 (5%)
Query: 77 TKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG 136
+ F+ LG G + TVYKG N G+ VK+ ++EG + E++ +
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGL---NKTTGVYVALKEVKLDSEEGTPSTA--IREISLMK 58
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFM---FRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+L+H N+V+L ++ LV+EFM + +++ L +
Sbjct: 59 ELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H E +++RD K N+L++ KL DFGLA+A G + + + T Y
Sbjct: 119 QGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVVTLWY 174
Query: 254 AAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLV 299
AP+ +M + S D++S G +L E++TG+ T ++ L+
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL-KSLP-----VAVKVLNKEGLQGH-REWLTEVNFLGQL 138
LGEG FG V +GL K P VAVK+L + + + ++E+ + +
Sbjct: 36 LGEGAFGQVVLAEA-----IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 90
Query: 139 -RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWA 183
+H N++ L+G C +D ++ E+ +G+L +L + + P LS
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
+ A+ A+G+ +L A + I+RD N+L+ D K++DFGLA+ D
Sbjct: 151 DLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+T + APE + T +SDV+SFGV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPN 142
+LG+G FG V K + + AVKV+NK + L EV L +L HPN
Sbjct: 29 MLGKGSFGEVLK------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
++KL + +V E G L + + ++ A R++ + G+ ++H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMH-- 138
Query: 203 ERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
+ +++RD K NILL+S D K+ DFGL+ Q T + R+ GT Y APE V
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIAPE-V 194
Query: 260 MTGHLTARSDVYSFGVVLLELLTG 283
+ G + DV+S GV+L LL+G
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 112/230 (48%), Gaps = 46/230 (20%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ--LRHPN 142
I G FG V+K + + VAVK+ LQ + W +E ++H N
Sbjct: 22 IKARGRFGCVWKAQLMNDF--------VAVKIFP---LQDKQSWQSEREIFSTPGMKHEN 70
Query: 143 LVKLI-----GYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
L++ I G E + L+ F +GSL ++L K + ++W +A ++GL+
Sbjct: 71 LLQFIAAEKRGSNLEVE-LWLITAFHDKGSLTDYL--KGNI-ITWNELCHVAETMSRGLS 126
Query: 198 FLHN--------AERPVI-YRDFKTSNILLDSDYTAKLSDFGLA----KAGPQGDETHVS 244
+LH +P I +RDFK+ N+LL SD TA L+DFGLA P GD TH
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGD-THGQ 185
Query: 245 TRVMGTYGYAAPEYVMTGHLT------ARSDVYSFGVVLLELLTGRKSVD 288
+GT Y APE V+ G + R D+Y+ G+VL EL++ K+ D
Sbjct: 186 ---VGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL-KSLP-----VAVKVLNKEGLQGH-REWLTEVNFLGQL 138
LGEG FG V +GL K P VAVK+L + + + ++E+ + +
Sbjct: 36 LGEGAFGQVVLAEA-----IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 90
Query: 139 -RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWA 183
+H N++ L+G C +D ++ E+ +G+L +L + + P LS
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
+ A+ A+G+ +L A + I+RD N+L+ D K++DFGLA+ D
Sbjct: 151 DLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+T + APE + T +SDV+SFGV+L E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPN 142
+LG+G FG V K + + AVKV+NK + L EV L +L HPN
Sbjct: 29 MLGKGSFGEVLK------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
++KL + +V E G L + + ++ A R++ + G+ ++H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMH-- 138
Query: 203 ERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
+ +++RD K NILL+S D K+ DFGL+ Q T + R+ GT Y APE V
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIAPE-V 194
Query: 260 MTGHLTARSDVYSFGVVLLELLTG 283
+ G + DV+S GV+L LL+G
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT 130
+++ + F +LG+G FG V+ + N +K+L V VL + ++ +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV-VLMDDDVECT---MV 67
Query: 131 EVNFLG-QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIA 189
E L HP L + ++ V E++ G L H+ LS AT
Sbjct: 68 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT----- 122
Query: 190 FGAAK---GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
F AA+ GL FLH+ + ++YRD K NILLD D K++DFG+ K GD +
Sbjct: 123 FYAAEIILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNE 178
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGR 284
GT Y APE ++ D +SFGV+L E+L G+
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 33 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 143
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 144 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGTLDYLPPEMIEGR 198
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 199 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 240
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 241 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 289
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 17 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 127
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 128 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGR 182
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 224
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 273
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 16 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 126
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 127 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 181
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 223
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 272
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 21 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 131
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 132 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGR 186
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 228
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 277
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 137/281 (48%), Gaps = 43/281 (15%)
Query: 25 SSSLPVKPERKHNRSISDLSDPSTPRNLEDSRKNAVLYTHVIAFS--------LFELETI 76
+ S ++P+++ R++ PS P+ L ++ K V +H ++ S + E +T
Sbjct: 325 TQSFIIRPQKEGERAL-----PSIPK-LANNEKQGV-RSHTVSVSETDDYAEIIDEEDTY 377
Query: 77 TKSFRSDY-----------ILGEGGFGTVYKG-YID-ENVRVGLKSLPVAVKVLNKEGLQ 123
T DY +GEG FG V++G Y+ EN ++ VA+K
Sbjct: 378 TMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPEN-----PAMAVAIKTCKNCTSD 432
Query: 124 GHRE-WLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVPLS 181
RE +L E + Q HP++VKLIG E+ ++ E G L + L RK ++ L
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDL- 490
Query: 182 WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET 241
A+ ++ A+ + LA+L + + ++RD N+L+ S+ KL DFGL++ D T
Sbjct: 491 -ASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDST 545
Query: 242 HV-STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELL 281
+ +++ + APE + T+ SDV+ FGV + E+L
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 16 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 126
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 127 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGR 181
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 223
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 272
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 16 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 126
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 127 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGR 181
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 223
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 272
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 19 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 129
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 130 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 184
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 226
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 275
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 113/295 (38%), Gaps = 44/295 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL----KSLPVAVKVLNKEGLQGHREWL-TEVNFLGQL-R 139
LG G FG V E GL ++ VAVK+L RE L +E+ L L
Sbjct: 31 LGAGAFGKVV-----EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI----------- 188
H N+V L+G C L++ E+ G L N L RK + T I
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 189 -----AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
++ AKG+AFL A + I+RD NILL K+ DFGLA+ V
Sbjct: 146 DLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWAR 303
+ APE + T SDV+S+G+ L EL SL
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF---------------SLGSSPY 248
Query: 304 PKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
P + K ++I A + + C +P RP +V+ +E
Sbjct: 249 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 21 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 131
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 132 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 186
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 228
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 277
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 16 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 126
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 127 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDYLPPEMIEGR 181
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 223
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 15 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 125
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 126 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 180
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 222
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 223 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 262
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 53
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+E + + L+ + A + F
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A G T + T Y
Sbjct: 113 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWY 168
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 114/295 (38%), Gaps = 44/295 (14%)
Query: 86 LGEGGFGTVYK----GYIDENVRVGLKSLPVAVKVLNKEGLQGHREWL-TEVNFLGQL-R 139
LG G FG V + G I + ++ VAVK+L RE L +E+ L L
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDA-----AMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI----------- 188
H N+V L+G C L++ E+ G L N L RK + T I
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 189 -----AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
++ AKG+AFL A + I+RD NILL K+ DFGLA+ V
Sbjct: 162 DLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 219
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWAR 303
+ APE + T SDV+S+G+ L EL SL
Sbjct: 220 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF---------------SLGSSPY 264
Query: 304 PKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
P + K ++I A + + C +P RP +V+ +E
Sbjct: 265 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL-KSLP-----VAVKVLNKEGLQGH-REWLTEVNFLGQL 138
LGEG FG V +GL K P VAVK+L + + + ++E+ + +
Sbjct: 77 LGEGAFGQVVLAEA-----IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 131
Query: 139 -RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWA 183
+H N++ L+G C +D ++ E+ +G+L +L + + P LS
Sbjct: 132 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
+ A+ A+G+ +L A + I+RD N+L+ D K++DFGLA+ D
Sbjct: 192 DLVSCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+T + APE + T +SDV+SFGV+L E+ T
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 20 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 130
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 131 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 185
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 227
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 228 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 267
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 81 RSDY----ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQ-GHREWLTEVNFL 135
R DY ++G G V Y K VA+K +N E Q E L E+ +
Sbjct: 9 RDDYELQEVIGSGATAVVQAAY------CAPKKEKVAIKRINLEKCQTSMDELLKEIQAM 62
Query: 136 GQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLEN---HLFRKA---TVPLSWATRMMIA 189
Q HPN+V D LV + + GS+ + H+ K + L +T I
Sbjct: 63 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 122
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGL-AKAGPQGDETHVSTR-- 246
+GL +LH + I+RD K NILL D + +++DFG+ A GD T R
Sbjct: 123 REVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 247 VMGTYGYAAPEYV--MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARP 304
+GT + APE + + G+ ++D++SFG+ +EL TG K P K L
Sbjct: 181 FVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT----- 234
Query: 305 KLNDKRKMLQ--IIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
L + L+ + D + +Y ++ +K SL CL ++P+ RP ++++
Sbjct: 235 -LQNDPPSLETGVQDKEMLKKYG-KSFRKMISL---CLQKDPEKRPTAAELL 281
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 85 ILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG-QLRHPN 142
+LG+G FG V+ + N +K+L V VL + ++ + E L HP
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDV-VLMDDDVECT---MVEKRVLSLAWEHPF 79
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK---GLAFL 199
L + ++ V E++ G L H+ LS AT F AA+ GL FL
Sbjct: 80 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT-----FYAAEIILGLQFL 134
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H+ + ++YRD K NILLD D K++DFG+ K GD + GT Y APE +
Sbjct: 135 HS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYIAPEIL 190
Query: 260 MTGHLTARSDVYSFGVVLLELLTGR 284
+ D +SFGV+L E+L G+
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 19 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 129
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 130 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 184
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 226
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 266
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 81 RSDY----ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQ-GHREWLTEVNFL 135
R DY ++G G V Y K VA+K +N E Q E L E+ +
Sbjct: 14 RDDYELQEVIGSGATAVVQAAY------CAPKKEKVAIKRINLEKCQTSMDELLKEIQAM 67
Query: 136 GQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLEN---HLFRKA---TVPLSWATRMMIA 189
Q HPN+V D LV + + GS+ + H+ K + L +T I
Sbjct: 68 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 127
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGL-AKAGPQGDETHVSTR-- 246
+GL +LH + I+RD K NILL D + +++DFG+ A GD T R
Sbjct: 128 REVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 247 VMGTYGYAAPEYV--MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARP 304
+GT + APE + + G+ ++D++SFG+ +EL TG K P K L
Sbjct: 186 FVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT----- 239
Query: 305 KLNDKRKMLQ--IIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
L + L+ + D + +Y ++ +K SL CL ++P+ RP ++++
Sbjct: 240 -LQNDPPSLETGVQDKEMLKKYG-KSFRKMISL---CLQKDPEKRPTAAELL 286
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 113/295 (38%), Gaps = 44/295 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL----KSLPVAVKVLNKEGLQGHREWL-TEVNFLGQL-R 139
LG G FG V E GL ++ VAVK+L RE L +E+ L L
Sbjct: 54 LGAGAFGKVV-----EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI----------- 188
H N+V L+G C L++ E+ G L N L RK + T I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 189 -----AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
++ AKG+AFL A + I+RD NILL K+ DFGLA+ V
Sbjct: 169 DLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVV 226
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWAR 303
+ APE + T SDV+S+G+ L EL SL
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF---------------SLGSSPY 271
Query: 304 PKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
P + K ++I A + + C +P RP +V+ +E
Sbjct: 272 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 21 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 131
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P T + GT Y PE +
Sbjct: 132 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEXIEGR 186
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 228
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP + +V+E + +P C N
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITANSSKPSNCQN 277
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 113/295 (38%), Gaps = 44/295 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL----KSLPVAVKVLNKEGLQGHREWL-TEVNFLGQL-R 139
LG G FG V E GL ++ VAVK+L RE L +E+ L L
Sbjct: 49 LGAGAFGKVV-----EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI----------- 188
H N+V L+G C L++ E+ G L N L RK + T I
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 189 -----AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
++ AKG+AFL A + I+RD NILL K+ DFGLA+ V
Sbjct: 164 DLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 221
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWAR 303
+ APE + T SDV+S+G+ L EL SL
Sbjct: 222 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF---------------SLGSSPY 266
Query: 304 PKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
P + K ++I A + + C +P RP +V+ +E
Sbjct: 267 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIK------KISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 149 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 113/295 (38%), Gaps = 44/295 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGL----KSLPVAVKVLNKEGLQGHREWL-TEVNFLGQL-R 139
LG G FG V E GL ++ VAVK+L RE L +E+ L L
Sbjct: 54 LGAGAFGKVV-----EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI----------- 188
H N+V L+G C L++ E+ G L N L RK + T I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 189 -----AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
++ AKG+AFL A + I+RD NILL K+ DFGLA+ V
Sbjct: 169 DLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 226
Query: 244 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWAR 303
+ APE + T SDV+S+G+ L EL SL
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF---------------SLGSSPY 271
Query: 304 PKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLE 358
P + K ++I A + + C +P RP +V+ +E
Sbjct: 272 PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 31/271 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
+G+G FG VYKG + V VA+K+++ +E + E+ L Q P +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEV------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
+ G + ++ E++ GS + L PL I KGL +LH+ +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSERK 137
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
I+RD K +N+LL KL+DFG+ AG D +GT + APE +
Sbjct: 138 --IHRDIKAANVLLSEQGDVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 265 TARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQY 324
++D++S G+ +EL G P + L+ P P LE Q+
Sbjct: 194 DFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PTLEGQH 240
Query: 325 SVRAAQKACSLAYYCLSQNPKARPLMSDVVE 355
S + CL+++P+ RP ++++
Sbjct: 241 S----KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 145 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSX-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 145 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 145 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 42 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 152
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P + GT Y PE +
Sbjct: 153 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGR 207
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 249
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 298
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 149 --VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 147 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 15 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 68
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 234
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 235 -------DSAPLALLHKILVENPSARITIPDI 259
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 129/282 (45%), Gaps = 42/282 (14%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG G FG V ++G D VA+K++ KEG E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 79
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
LV+L G C + ++ E+M G L N+L R+ + + + + +L +
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
+ ++RD N L++ K+SDFGL++ +ET S ++ PE +M
Sbjct: 139 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS-SVGSKFPVRWSPPEVLMY 195
Query: 262 GHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRL 320
+++SD+++FGV++ E+ + G+ ++ S+ + + L++ P L
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI----------AQGLRLYRPHL 245
Query: 321 ENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLE 358
A++K ++ Y C + RP L+S++++ ++
Sbjct: 246 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTV-YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG FG V + +V LK ++ ++L K + H E+++L LRHP+++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKF--ISRQLLKKSDM--HMRVEREISYLKLLRHPHII 72
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
KL ++V E+ G L +++ K + R A + + H +
Sbjct: 73 KLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCHRHK- 128
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+++RD K N+LLD + K++DFGL+ G+ S G+ YAAPE V+ G L
Sbjct: 129 -IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VINGKL 183
Query: 265 TA--RSDVYSFGVVLLELLTGRKSVD 288
A DV+S G+VL +L GR D
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 164
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 165 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 152
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 153 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 145 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 144
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 145 --VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQLRHPNLV 144
LG G FG VY+G + + L VAVK L + Q ++L E + +L H N+V
Sbjct: 39 LGHGAFGEVYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIV 97
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAKGLAFL 199
+ IG + R ++ E M G L++ L P L+ + +A A G +L
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 200 HNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
E I+RD N LL AK+ DFG+A+ + M + P
Sbjct: 158 E--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLT 282
E M G T+++D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 15 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINAMLNHENVV 68
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 234
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 235 -------DSAPLALLHKILVENPSARITIPDI 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 16 LGKGKFGNVYLA------REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 126
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P + GT Y PE +
Sbjct: 127 -KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGR 181
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + D K + R+E
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQDTYKRIS----RVEF 223
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 15 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 234
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 235 -------DSAPLALLHKILVENPSARITIPDI 259
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 142
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 143 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 86 LGEGGFGTVYKG-YID-ENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPN 142
+GEG FG V++G Y+ EN +L VA+K RE +L E + Q HP+
Sbjct: 23 IGEGQFGDVHQGIYMSPEN-----PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 77
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+VKLIG E+ ++ E G L + L RK ++ L A+ ++ A+ + LA+L +
Sbjct: 78 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES 134
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV-STRVMGTYGYAAPEYVM 260
+ ++RD N+L+ S+ KL DFGL++ D T+ +++ + APE +
Sbjct: 135 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESIN 190
Query: 261 TGHLTARSDVYSFGVVLLELL 281
T+ SDV+ FGV + E+L
Sbjct: 191 FRRFTSASDVWMFGVCMWEIL 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 86 LGEGGFGTVYKG-YID-ENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPN 142
+GEG FG V++G Y+ EN +L VA+K RE +L E + Q HP+
Sbjct: 15 IGEGQFGDVHQGIYMSPEN-----PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 69
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+VKLIG E+ ++ E G L + L RK ++ L A+ ++ A+ + LA+L +
Sbjct: 70 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES 126
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV-STRVMGTYGYAAPEYVM 260
+ ++RD N+L+ S+ KL DFGL++ D T+ +++ + APE +
Sbjct: 127 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESIN 182
Query: 261 TGHLTARSDVYSFGVVLLELL 281
T+ SDV+ FGV + E+L
Sbjct: 183 FRRFTSASDVWMFGVCMWEIL 203
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 149
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 150 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 150
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 151 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 141
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 142 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK--EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ E+ +G+L +L + VP +++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 142
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 143 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 86 LGEGGFGTVYKG-YID-ENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPN 142
+GEG FG V++G Y+ EN +L VA+K RE +L E + Q HP+
Sbjct: 21 IGEGQFGDVHQGIYMSPEN-----PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 75
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+VKLIG E+ ++ E G L + L RK ++ L A+ ++ A+ + LA+L +
Sbjct: 76 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES 132
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV-STRVMGTYGYAAPEYVM 260
+ ++RD N+L+ S+ KL DFGL++ D T+ +++ + APE +
Sbjct: 133 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESIN 188
Query: 261 TGHLTARSDVYSFGVVLLELL 281
T+ SDV+ FGV + E+L
Sbjct: 189 FRRFTSASDVWMFGVCMWEIL 209
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 86 LGEGGFGTVYKG-YID-ENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPN 142
+GEG FG V++G Y+ EN +L VA+K RE +L E + Q HP+
Sbjct: 18 IGEGQFGDVHQGIYMSPEN-----PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 72
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+VKLIG E+ ++ E G L + L RK ++ L A+ ++ A+ + LA+L +
Sbjct: 73 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES 129
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV-STRVMGTYGYAAPEYVM 260
+ ++RD N+L+ S+ KL DFGL++ D T+ +++ + APE +
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESIN 185
Query: 261 TGHLTARSDVYSFGVVLLELL 281
T+ SDV+ FGV + E+L
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 15 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 234
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 235 -------DSAPLALLHKILVENPSARITIPDI 259
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 15 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 234
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 235 -------DSAPLALLHKILVENPSARITIPDI 259
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 15 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 234
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 235 -------DSAPLALLHKILVENPSARITIPDI 259
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 86 LGEGGFGTVYKG-YID-ENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPN 142
+GEG FG V++G Y+ EN +L VA+K RE +L E + Q HP+
Sbjct: 20 IGEGQFGDVHQGIYMSPEN-----PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 74
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+VKLIG E+ ++ E G L + L RK ++ L A+ ++ A+ + LA+L +
Sbjct: 75 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES 131
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV-STRVMGTYGYAAPEYVM 260
+ ++RD N+L+ S+ KL DFGL++ D T+ +++ + APE +
Sbjct: 132 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESIN 187
Query: 261 TGHLTARSDVYSFGVVLLELL 281
T+ SDV+ FGV + E+L
Sbjct: 188 FRRFTSASDVWMFGVCMWEIL 208
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK--EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ E+ +G+L +L + VP +++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 18 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 128
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P + GT Y PE +
Sbjct: 129 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGR 183
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 225
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 226 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 274
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 86 LGEGGFGTVYKGYID------ENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
LG G FG VY+G + ++V +K+LP +V ++ Q ++L E + +L
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSE---QDELDFLMEALIISKLN 106
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAK 194
H N+V+ IG + R ++ E M G L++ L P L+ + +A A
Sbjct: 107 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
G +L E I+RD N LL AK+ DFG+A+ + M
Sbjct: 167 GCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE M G T+++D +SFGV+L E+ +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 125/302 (41%), Gaps = 49/302 (16%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 37 LGRGAFGQVIEADAFGIDKTA----TXRTVAVKML-KEGATHSEHRALMSELKILIHIGH 91
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP----------LSWATRM 186
H N+V L+G C + L+V EF G+L +L R VP L+ +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 152 XYSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKL 306
+ APE + T +SDV+SFGV+L E+ SL P +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGV 254
Query: 307 NDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPLQC 362
+ + RL+ +RA Y C P RP S++VE L L
Sbjct: 255 KIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 363 AN 364
AN
Sbjct: 311 AN 312
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 86 LGEGGFGTVYKG-YID-ENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPN 142
+GEG FG V++G Y+ EN +L VA+K RE +L E + Q HP+
Sbjct: 46 IGEGQFGDVHQGIYMSPEN-----PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 100
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+VKLIG E+ ++ E G L + L RK ++ L A+ ++ A+ + LA+L +
Sbjct: 101 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES 157
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV-STRVMGTYGYAAPEYVM 260
+ ++RD N+L+ S+ KL DFGL++ D T+ +++ + APE +
Sbjct: 158 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESIN 213
Query: 261 TGHLTARSDVYSFGVVLLELL 281
T+ SDV+ FGV + E+L
Sbjct: 214 FRRFTSASDVWMFGVCMWEIL 234
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 119/289 (41%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 18 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 128
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K+++FG + P T + GT Y PE +
Sbjct: 129 -KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 183
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 225
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 226 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 274
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 125/303 (41%), Gaps = 50/303 (16%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRT----VAVKML-KEGATHSEHRALMSELKILIHIGH 90
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP-----------LSWATR 185
H N+V L+G C + L+V EF G+L +L R VP L+
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ +F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK 305
+ APE + T +SDV+SFGV+L E+ SL P
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPG 253
Query: 306 LNDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPLQ 361
+ + + RL+ +RA Y C P RP S++VE L L
Sbjct: 254 VKIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309
Query: 362 CAN 364
AN
Sbjct: 310 QAN 312
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 43/281 (15%)
Query: 25 SSSLPVKPERKHNRSISDLSDPSTPRNLEDSRKNAVLYTHVIAFS--------LFELETI 76
+ S ++P+++ R++ PS P+ L ++ K V +H ++ S + E +T
Sbjct: 325 TQSFIIRPQKEGERAL-----PSIPK-LANNEKQGV-RSHTVSVSETDDYAEIIDEEDTY 377
Query: 77 TKSFRSDY-----------ILGEGGFGTVYKG-YID-ENVRVGLKSLPVAVKVLNKEGLQ 123
T DY +GEG FG V++G Y+ EN ++ VA+K
Sbjct: 378 TMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPEN-----PAMAVAIKTCKNCTSD 432
Query: 124 GHRE-WLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVPLS 181
RE +L E + Q HP++VKLIG E+ ++ E G L + L RK ++ L
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDL- 490
Query: 182 WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET 241
A+ ++ A+ + LA+L + + ++RD N+L+ + KL DFGL++ D T
Sbjct: 491 -ASLILYAYQLSTALAYLES--KRFVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDST 545
Query: 242 HV-STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELL 281
+ +++ + APE + T+ SDV+ FGV + E+L
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 13 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 123
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 124 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 232
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 233 -------DSAPLALLHKILVENPSARITIPDI 257
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 86 LGEGGFGTVYKG-YID-ENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPN 142
+GEG FG V++G Y+ EN ++ VA+K RE +L E + Q HP+
Sbjct: 18 IGEGQFGDVHQGIYMSPEN-----PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 72
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+VKLIG E+ ++ E G L + L RK ++ L A+ ++ A+ + LA+L +
Sbjct: 73 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYLES 129
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
+ ++RD N+L+ S+ KL DFGL++ S + + APE +
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-KWMAPESINF 186
Query: 262 GHLTARSDVYSFGVVLLELL 281
T+ SDV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 19 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 129
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P + GT Y PE +
Sbjct: 130 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGR 184
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 226
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 275
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 15 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 234
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 235 -------DSAPLALLHKILVENPSARITIPDI 259
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 15 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 234
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 235 -------DSAPLALLHKILVENPSARITIPDI 259
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 19 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 129
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K+++FG + P T + GT Y PE +
Sbjct: 130 -KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 184
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 226
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 266
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 116/282 (41%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 16 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 126
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P + GT Y PE +
Sbjct: 127 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGR 181
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 223
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 263
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L RH N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 147 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 42/289 (14%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 17 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 127
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P + GT Y PE +
Sbjct: 128 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEGR 182
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 224
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE-------TLEPLQCAN 364
+ + A L L NP RP++ +V+E + +P C N
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQN 273
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 126/300 (42%), Gaps = 47/300 (15%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTA----TXRTVAVKML-KEGATHSEHRALMSELKILIHIGH 89
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP--------LSWATRMMI 188
H N+V L+G C + L+V EF G+L +L R VP L+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
+F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 150 SFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 249 GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLND 308
+ APE + T +SDV+SFGV+L E+ SL P +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGV-- 250
Query: 309 KRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPLQCAN 364
K+ + RL+ +RA Y C P RP S++VE L L AN
Sbjct: 251 --KIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 308
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG +G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAYGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 116/282 (41%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 19 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 129
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P + GT Y PE +
Sbjct: 130 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGR 184
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 226
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 266
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTA----TCRTVAVKML-KEGATHSEHRALMSELKILIHIGH 80
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP------------LSWAT 184
H N+V L+G C + L+V EF G+L +L R VP L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 185 RMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 244
+ +F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 141 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARP 304
+ APE + T +SDV+SFGV+L E+ SL P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYP 243
Query: 305 KLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPL 360
+ + + RL+ +RA Y C P RP S++VE L L
Sbjct: 244 GVKIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
Query: 361 QCAN 364
AN
Sbjct: 300 LQAN 303
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 116/282 (41%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 19 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 129
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P + GT Y PE +
Sbjct: 130 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGR 184
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 226
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 266
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 116/282 (41%), Gaps = 37/282 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 16 LGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS- 126
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S K++DFG + P + GT Y PE +
Sbjct: 127 -KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGR 181
Query: 263 HLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLEN 322
+ D++S GV+ E L G+ + N ++ + I R+E
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEA-----------------NTYQETYKRIS-RVEF 223
Query: 323 QYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ + A L L NP RP++ +V+E P AN
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE--HPWITAN 263
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTA----TCRTVAVKML-KEGATHSEHRALMSELKILIHIGH 80
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP------------LSWAT 184
H N+V L+G C + L+V EF G+L +L R VP L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 185 RMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 244
+ +F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 141 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARP 304
+ APE + T +SDV+SFGV+L E+ SL P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYP 243
Query: 305 KLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPL 360
+ + + RL+ +RA Y C P RP S++VE L L
Sbjct: 244 GVKIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
Query: 361 QCAN 364
AN
Sbjct: 300 LQAN 303
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG+G FG VYK +N G + A KV+ + + +++ E+ L HP +VK
Sbjct: 27 LGDGAFGKVYKA---KNKETGALA---AAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLEN---HLFRKATVP-LSWATRMMIAFGAAKGLAFLHN 201
L+G D ++ EF G+++ L R T P + R M+ + L FLH+
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHS 135
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
+ +I+RD K N+L+ + +L+DFG++ + + S +GT + APE VM
Sbjct: 136 --KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMC 191
Query: 262 GHLTA-----RSDVYSFGVVLLEL 280
+ ++D++S G+ L+E+
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEM 215
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWL-TEVNFLGQLRHPNL 143
+LG G F V + E+ R VA+K + KE L+G + E+ L +++HPN+
Sbjct: 25 VLGTGAFSEVI---LAEDKRT---QKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V L H L+ + + G L + + K A+R++ F + +LH+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI--FQVLDAVKYLHDL- 135
Query: 204 RPVIYRDFKTSNIL---LDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++RD K N+L LD D +SDFGL+K G V + GT GY APE +
Sbjct: 136 -GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLA 191
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
+ D +S GV+ LL G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L RH N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 147 --VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 24/204 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG+G FG VYK +N G + A KV+ + + +++ E+ L HP +VK
Sbjct: 19 LGDGAFGKVYKA---KNKETGALA---AAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLEN---HLFRKATVP-LSWATRMMIAFGAAKGLAFLHN 201
L+G D ++ EF G+++ L R T P + R M+ + L FLH+
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHS 127
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
+ +I+RD K N+L+ + +L+DFG++ + + S +GT + APE VM
Sbjct: 128 --KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMC 183
Query: 262 GHLTA-----RSDVYSFGVVLLEL 280
+ ++D++S G+ L+E+
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT--EVNFLGQLRHPN 142
+LG+G FG V+ + + R L A+KVL K L+ T E + L + HP
Sbjct: 35 VLGQGSFGKVF--LVRKVTRPDSGHL-YAMKVLKKATLKVRDRVRTKMERDILADVNHPF 91
Query: 143 LVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK---GLAF 198
+VKL Y + + +L L+ +F+ G L L ++ T + F A+ GL
Sbjct: 92 VVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-----TEEDVKFYLAELALGLDH 145
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
LH+ +IYRD K NILLD + KL+DFGL+K D + GT Y APE
Sbjct: 146 LHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCGTVEYMAPEV 201
Query: 259 VMTGHLTARSDVYSFGVVLLELLTG 283
V + +D +S+GV++ E+LTG
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 17/201 (8%)
Query: 86 LGEGGFGTVYKG-YID-ENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPN 142
+GEG FG V++G Y+ EN ++ VA+K RE +L E + Q HP+
Sbjct: 18 IGEGQFGDVHQGIYMSPEN-----PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 72
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+VKLIG E+ ++ E G L + L RK ++ L A+ ++ A+ + LA+L +
Sbjct: 73 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALAYLES 129
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV-STRVMGTYGYAAPEYVM 260
+ ++RD N+L+ S+ KL DFGL++ D T+ +++ + APE +
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESIN 185
Query: 261 TGHLTARSDVYSFGVVLLELL 281
T+ SDV+ FGV + E+L
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWL-TEVNFLGQLRHPNL 143
+LG G F V + E+ R VA+K + KE L+G + E+ L +++HPN+
Sbjct: 25 VLGTGAFSEVI---LAEDKRT---QKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V L H L+ + + G L + + K A+R++ F + +LH+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI--FQVLDAVKYLHDL- 135
Query: 204 RPVIYRDFKTSNIL---LDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++RD K N+L LD D +SDFGL+K G V + GT GY APE +
Sbjct: 136 -GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG---SVLSTACGTPGYVAPEVLA 191
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
+ D +S GV+ LL G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRT----VAVKML-KEGATHSEHRALMSELKILIHIGH 89
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP------------LSWAT 184
H N+V L+G C + L+V EF G+L +L R VP L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 185 RMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 244
+ +F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 150 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARP 304
+ APE + T +SDV+SFGV+L E+ SL P
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYP 252
Query: 305 KLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPL 360
+ + + RL+ +RA Y C P RP S++VE L L
Sbjct: 253 GVKIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
Query: 361 QCAN 364
AN
Sbjct: 309 LQAN 312
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 125/300 (41%), Gaps = 47/300 (15%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTA----TXRTVAVKML-KEGATHSEHRALMSELKILIHIGH 89
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP--------LSWATRMMI 188
H N+V L+G C + L+V EF G+L +L R VP L+ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
+F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 150 SFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 249 GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLND 308
+ APE + T +SDV+SFGV+L E+ SL P +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKI 252
Query: 309 KRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPLQCAN 364
+ + RL+ +RA Y C P RP S++VE L L AN
Sbjct: 253 DEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 308
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWL-TEVNFLGQLRHPNL 143
+LG G F V + E+ R VA+K + KE L+G + E+ L +++HPN+
Sbjct: 25 VLGTGAFSEVI---LAEDKRT---QKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V L H L+ + + G L + + K A+R++ F + +LH+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI--FQVLDAVKYLHDL- 135
Query: 204 RPVIYRDFKTSNIL---LDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++RD K N+L LD D +SDFGL+K G V + GT GY APE +
Sbjct: 136 -GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLA 191
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
+ D +S GV+ LL G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 128/282 (45%), Gaps = 42/282 (14%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG G FG V ++G D VA+K++ KEG E++ E + L H
Sbjct: 32 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 79
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
LV+L G C + ++ E+M G L N+L R+ + + + + +L +
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
+ ++RD N L++ K+SDFGL++ DE S ++ PE +M
Sbjct: 139 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMY 195
Query: 262 GHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRL 320
+++SD+++FGV++ E+ + G+ ++ S+ + + L++ P L
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI----------AQGLRLYRPHL 245
Query: 321 ENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLE 358
A++K ++ Y C + RP L+S++++ ++
Sbjct: 246 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 86 LGEGGFGTVYKGYID------ENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
LG G FG VY+G + ++V +K+LP +V ++ Q ++L E + +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSE---QDELDFLMEALIISKFN 91
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAK 194
H N+V+ IG + R ++ E M G L++ L P L+ + +A A
Sbjct: 92 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
G +L E I+RD N LL AK+ DFG+A+ + M
Sbjct: 152 GCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE M G T+++D +SFGV+L E+ +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV ++ K+ E + L E+ L + RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIR------KISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQLRHPNLV 144
LG G FG VY+G + + L VAVK L + Q ++L E + + H N+V
Sbjct: 65 LGHGAFGEVYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 123
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAKGLAFL 199
+ IG + R ++ E M G L++ L P L+ + +A A G +L
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 200 HNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
E I+RD N LL AK+ DFG+A+ + M + P
Sbjct: 184 E--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLT 282
E M G T+++D +SFGV+L E+ +
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-LSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ LS + +GL ++H+A
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE ++
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 86 LGEGGFGTVYKGYID------ENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
LG G FG VY+G + ++V +K+LP +V ++ Q ++L E + +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSE---QDELDFLMEALIISKFN 91
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAK 194
H N+V+ IG + R ++ E M G L++ L P L+ + +A A
Sbjct: 92 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
G +L E I+RD N LL AK+ DFG+A+ + M
Sbjct: 152 GCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE M G T+++D +SFGV+L E+ +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 128/282 (45%), Gaps = 42/282 (14%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG G FG V ++G D VA+K++ KEG E++ E + L H
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 59
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
LV+L G C + ++ E+M G L N+L R+ + + + + +L +
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
+ ++RD N L++ K+SDFGL++ DE S ++ PE +M
Sbjct: 119 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMY 175
Query: 262 GHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRL 320
+++SD+++FGV++ E+ + G+ ++ S+ + + L++ P L
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI----------AQGLRLYRPHL 225
Query: 321 ENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLE 358
A++K ++ Y C + RP L+S++++ ++
Sbjct: 226 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 80 FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
+ D +G G F TVYKG +D V + + + L K Q +E E L L+
Sbjct: 28 LKFDIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQ 83
Query: 140 HPNLVKLI--------GYCCEDDHRLLVYEFMFRGSLENHLFR----KATVPLSWATRMM 187
HPN+V+ G C +LV E G+L+ +L R K V SW +++
Sbjct: 84 HPNIVRFYDSWESTVKGKKC----IVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL 139
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGLAKAGPQGDETHVSTR 246
KGL FLH P+I+RD K NI + + K+ D GLA +
Sbjct: 140 ------KGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKA 189
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
V+GT + APE + DVY+FG LE T
Sbjct: 190 VIGTPEFXAPEXYEEKY-DESVDVYAFGXCXLEXAT 224
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 128/282 (45%), Gaps = 42/282 (14%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG G FG V ++G D VA+K++ KEG E++ E + L H
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 63
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
LV+L G C + ++ E+M G L N+L R+ + + + + +L +
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 122
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
+ ++RD N L++ K+SDFGL++ DE S ++ PE +M
Sbjct: 123 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMY 179
Query: 262 GHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRL 320
+++SD+++FGV++ E+ + G+ ++ S+ + + L++ P L
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI----------AQGLRLYRPHL 229
Query: 321 ENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLE 358
A++K ++ Y C + RP L+S++++ ++
Sbjct: 230 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 133/285 (46%), Gaps = 48/285 (16%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG G FG V ++G D VA+K++ KEG E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 64
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
LV+L G C + ++ E+M G L N+L R+ + + + + +L +
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT---YGYAAPEY 258
+ ++RD N L++ K+SDFGL++ D+ + S+R G+ ++ PE
Sbjct: 124 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSR--GSKFPVRWSPPEV 177
Query: 259 VMTGHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIID 317
+M +++SD+++FGV++ E+ + G+ ++ S+ + + L++
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI----------AQGLRLYR 227
Query: 318 PRLENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLE 358
P L A++K ++ Y C + RP L+S++++ ++
Sbjct: 228 PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG--HREWLTEVNFLGQLRHPNL 143
LGE FG VYKG++ G ++ VA+K L K+ +G E+ E +L+HPN+
Sbjct: 34 LGEDRFGKVYKGHL-FGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLF--------------RKATVPLSWATRMMIA 189
V L+G +D +++ + G L L R L + +
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG 249
A G+ +L + V+++D T N+L+ K+SD GL + D + +
Sbjct: 152 AQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 250 TYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE +M G + SD++S+GVVL E+ +
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDK--PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ E+ +G+L +L + VP +++ +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 207 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK------ATVPLSWATRMMIAFGAAKGLAF 198
+ D R E M L HL T LS + +GL +
Sbjct: 105 GI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKY 159
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPE 257
+H+A V++RD K SN+LL++ K+ DFGLA+ A P D T T + T Y APE
Sbjct: 160 IHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 258 YVMTGHLTARS-DVYSFGVVLLELLTGR 284
++ +S D++S G +L E+L+ R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 86 LGEGGFGTVYKGYID------ENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
LG G FG VY+G + ++V +K+LP +V ++ Q ++L E + +
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSE---QDELDFLMEALIISKFN 108
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAK 194
H N+V+ IG + R ++ E M G L++ L P L+ + +A A
Sbjct: 109 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 168
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
G +L E I+RD N LL AK+ DFG+A+ + M
Sbjct: 169 GCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 226
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE M G T+++D +SFGV+L E+ +
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 18/212 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVN 133
++F+ +GEG +G VYK R L VA+K + EG+ + E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTA--IREIS 57
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN+VKL+ ++ LV+E + + L+ + A + F
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+GLAF H+ V++RD K N+L++++ KL+DFGLA+A T+ V T Y
Sbjct: 117 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWY 172
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE ++ + + D++S G + E++T R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 43/225 (19%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNF--LGQLRHPN 142
++G G +G VYKG +DE PVAVKV + + ++ E N + + H N
Sbjct: 20 LIGRGRYGAVYKGSLDER--------PVAVKVFS---FANRQNFINEKNIYRVPLMEHDN 68
Query: 143 LVKLI--GYCCEDDHR---LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ + I D R LLV E+ GSL +L + W + +A +GLA
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLA 125
Query: 198 FLH------NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLA------KAGPQGDETHVS 244
+LH + +P I +RD + N+L+ +D T +SDFGL+ + G+E + +
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185
Query: 245 TRVMGTYGYAAPEYVMTGHLTARS--------DVYSFGVVLLELL 281
+GT Y APE V+ G + R D+Y+ G++ E+
Sbjct: 186 ISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 128/282 (45%), Gaps = 42/282 (14%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG G FG V ++G D VA+K++ KEG E++ E + L H
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 70
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
LV+L G C + ++ E+M G L N+L R+ + + + + +L +
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 129
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
+ ++RD N L++ K+SDFGL++ DE S ++ PE +M
Sbjct: 130 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMY 186
Query: 262 GHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRL 320
+++SD+++FGV++ E+ + G+ ++ S+ + + L++ P L
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI----------AQGLRLYRPHL 236
Query: 321 ENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLE 358
A++K ++ Y C + RP L+S++++ ++
Sbjct: 237 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQLRHPNLV 144
LG G FG VY+G + + L VAVK L + Q ++L E + + H N+V
Sbjct: 53 LGHGAFGEVYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 111
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAKGLAFL 199
+ IG + R ++ E M G L++ L P L+ + +A A G +L
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 200 HNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
E I+RD N LL AK+ DFG+A+ + M + P
Sbjct: 172 E--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLT 282
E M G T+++D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQLRHPNLV 144
LG G FG VY+G + + L VAVK L + Q ++L E + + H N+V
Sbjct: 39 LGHGAFGEVYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAKGLAFL 199
+ IG + R ++ E M G L++ L P L+ + +A A G +L
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 200 HNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
E I+RD N LL AK+ DFG+A+ + M + P
Sbjct: 158 E--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLT 282
E M G T+++D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 86 LGEGGFGTVYKGYID------ENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
LG G FG VY+G + ++V +K+LP +V ++ Q ++L E + +
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSE---QDELDFLMEALIISKFN 98
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAK 194
H N+V+ IG + R ++ E M G L++ L P L+ + +A A
Sbjct: 99 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 158
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
G +L E I+RD N LL AK+ DFG+A+ + M
Sbjct: 159 GCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 216
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE M G T+++D +SFGV+L E+ +
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 128/282 (45%), Gaps = 42/282 (14%)
Query: 86 LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP 141
LG G FG V ++G D VA+K++ KEG E++ E + L H
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----------VAIKMI-KEGSMSEDEFIEEAKVMMNLSHE 64
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
LV+L G C + ++ E+M G L N+L R+ + + + + +L +
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
+ ++RD N L++ K+SDFGL++ DE S ++ PE +M
Sbjct: 124 --KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMY 180
Query: 262 GHLTARSDVYSFGVVLLELLT-GRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRL 320
+++SD+++FGV++ E+ + G+ ++ S+ + + L++ P L
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI----------AQGLRLYRPHL 230
Query: 321 ENQYSVRAAQKACSLAYYCLSQNPKARP----LMSDVVETLE 358
A++K ++ Y C + RP L+S++++ ++
Sbjct: 231 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 86 LGEGGFGTVYKGYID------ENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
LG G FG VY+G + ++V +K+LP +V ++ Q ++L E + +
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSE---QDELDFLMEALIISKFN 83
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAK 194
H N+V+ IG + R ++ E M G L++ L P L+ + +A A
Sbjct: 84 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 143
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
G +L E I+RD N LL AK+ DFG+A+ + M
Sbjct: 144 GCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 201
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE M G T+++D +SFGV+L E+ +
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 28/226 (12%)
Query: 85 ILGEGGFGTVYKGYIDENVRVG----LKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRH 140
+LG+GG+G V++ G +K L A+ V N + + E N L +++H
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK---AERNILEEVKH 80
Query: 141 PNLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
P +V LI Y + +L L+ E++ G L L R+ A + A G
Sbjct: 81 PFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG---- 135
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQ-GDETHVSTRVMGTYGYAAPEY 258
H ++ +IYRD K NI+L+ KL+DFGL K G TH GT Y APE
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FCGTIEYMAPEI 192
Query: 259 VM-TGHLTARSDVYSFGVVLLELLTG---------RKSVDKTRPSK 294
+M +GH A D +S G ++ ++LTG +K++DK K
Sbjct: 193 LMRSGHNRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK--EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ E+ +G+L +L + VP +++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQLRHPNLV 144
LG G FG VY+G + + L VAVK L + Q ++L E + + H N+V
Sbjct: 39 LGHGAFGEVYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAKGLAFL 199
+ IG + R ++ E M G L++ L P L+ + +A A G +L
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 200 HNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
E I+RD N LL AK+ DFG+A+ + M + P
Sbjct: 158 E--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLT 282
E M G T+++D +SFGV+L E+ +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 79 SFRSDYILGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
+FR + +G G F VY+ + + V V LK V++ + + + + E++ L Q
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKK----VQIFDLMDAKARADCIKEIDLLKQ 88
Query: 138 LRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL--FRKAT--VPLSWATRMMIAFGAA 193
L HPN++K ED+ +V E G L + F+K +P + + +A
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +H+ R V++RD K +N+ + + KL D GL + +T + ++GT Y
Sbjct: 149 --LEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYY 202
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLEL 280
+PE + +SD++S G +L E+
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK--EAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ E+ +G+L +L + VP +++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK-EGLQGHREWLTEVNFLGQLRHPNLV 144
LG G FG VY+G + + L VAVK L + Q ++L E + + H N+V
Sbjct: 53 LGHGAFGEVYEGQVS-GMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIV 111
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAKGLAFL 199
+ IG + R ++ E M G L++ L P L+ + +A A G +L
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 200 HNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
E I+RD N LL AK+ DFG+A+ + M + P
Sbjct: 172 E--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLT 282
E M G T+++D +SFGV+L E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG G G V+K V L +A K+++ E R + + E+ L + P +V
Sbjct: 17 LGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
G D + E M GSL+ L + +P ++ IA KGL +L +
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK 128
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+++RD K SNIL++S KL DFG++ G DE ++ +GT Y +PE + H
Sbjct: 129 -IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVGTRSYMSPERLQGTHY 183
Query: 265 TARSDVYSFGVVLLELLTGR 284
+ +SD++S G+ L+E+ GR
Sbjct: 184 SVQSDIWSMGLSLVEMAVGR 203
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG--HREWLTEVNFLGQLRHPNL 143
LGE FG VYKG++ G ++ VA+K L K+ +G E+ E +L+HPN+
Sbjct: 17 LGEDRFGKVYKGHL-FGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLF--------------RKATVPLSWATRMMIA 189
V L+G +D +++ + G L L R L + +
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG 249
A G+ +L + V+++D T N+L+ K+SD GL + D + +
Sbjct: 135 AQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 250 TYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE +M G + SD++S+GVVL E+ +
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRT----VAVKML-KEGATHSEHRALMSELKILIHIGH 89
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP------------LSWAT 184
H N+V L+G C + L+V EF G+L +L R VP L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 185 RMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 244
+ +F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 150 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARP 304
+ APE + T +SDV+SFGV+L E+ SL P
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYP 252
Query: 305 KLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPL 360
+ + + RL+ +RA Y C P RP S++VE L L
Sbjct: 253 GVKIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
Query: 361 QCAN 364
AN
Sbjct: 309 LQAN 312
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 26/225 (11%)
Query: 85 ILGEGGFGTVYKGYIDENVRVG----LKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRH 140
+LG+GG+G V++ G +K L A+ V N + + E N L +++H
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK---AERNILEEVKH 80
Query: 141 PNLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
P +V LI Y + +L L+ E++ G L L R+ A + A G
Sbjct: 81 PFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG---- 135
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H ++ +IYRD K NI+L+ KL+DFGL K + V+ GT Y APE +
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH--DGTVTHXFCGTIEYMAPEIL 193
Query: 260 M-TGHLTARSDVYSFGVVLLELLTG---------RKSVDKTRPSK 294
M +GH A D +S G ++ ++LTG +K++DK K
Sbjct: 194 MRSGHNRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK--EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ E+ +G+L +L + VP +++ +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK--EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ E+ +G+L +L + VP +++ +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V V+ A+K+L KE + E LTE L RHP
Sbjct: 155 LLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 208
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAFL 199
L L D V E+ G L HL R+ A +GA L +L
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR----FYGAEIVSALDYL 264
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H +E+ V+YRD K N++LD D K++DFGL K G + T + GT Y APE +
Sbjct: 265 H-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVL 321
Query: 260 MTGHLTARSDVYSFGVVLLELLTGR 284
D + GVV+ E++ GR
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V V+ A+K+L KE + E LTE L RHP
Sbjct: 158 LLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 211
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAFL 199
L L D V E+ G L HL R+ A +GA L +L
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR----FYGAEIVSALDYL 267
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H +E+ V+YRD K N++LD D K++DFGL K G + T + GT Y APE +
Sbjct: 268 H-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVL 324
Query: 260 MTGHLTARSDVYSFGVVLLELLTGR 284
D + GVV+ E++ GR
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 86 LGEGGFGTVYKGYID------ENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
LG G FG VY+G + ++V +K+LP +V ++ Q ++L E + +
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP---EVCSE---QDELDFLMEALIISKFN 109
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAK 194
H N+V+ IG + R ++ E M G L++ L P L+ + +A A
Sbjct: 110 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 169
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
G +L E I+RD N LL AK+ DFG+A+ + M
Sbjct: 170 GCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 227
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ PE M G T+++D +SFGV+L E+ +
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLR-H 140
+LG+G FG V + E + AVKVL K+ + + +TE L R H
Sbjct: 30 VLGKGSFGKVMLARVKETGDL------YAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 141 PNLVKLIGYCC--EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAF 198
P L +L +CC D V EF+ G L H+ + + A A L F
Sbjct: 84 PFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEIISALMF 139
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
LH+ + +IYRD K N+LLD + KL+DFG+ K G T + GT Y APE
Sbjct: 140 LHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPEI 195
Query: 259 VMTGHLTARSDVYSFGVVLLELLTG 283
+ D ++ GV+L E+L G
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE-GLQGHREWLTEVNFLGQLRHPNLV 144
LG G FG VY+G + + L VAVK L + Q ++L E + + H N+V
Sbjct: 79 LGHGAFGEVYEGQVS-GMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP-----LSWATRMMIAFGAAKGLAFL 199
+ IG + R ++ E M G L++ L P L+ + +A A G +L
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 200 HNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
E I+RD N LL AK+ DFG+A+ + M + P
Sbjct: 198 E--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLT 282
E M G T+++D +SFGV+L E+ +
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T + T Y APE ++
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG +G V Y + N VRV +K K+ E + L E+ L + RH N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIK------KISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ T LS + +GL ++H+A
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN 149
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+LL++ K+ DFGLA+ A P D T + T Y APE ++
Sbjct: 150 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTA----TCRTVAVKML-KEGATHSEHRALMSELKILIHIGH 80
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP------------LSWAT 184
H N+V L+G C + L+V EF G+L +L R VP L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 185 RMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 244
+ +F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 141 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARP 304
+ APE + T +SDV+SFGV+L E+ SL P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYP 243
Query: 305 KLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPL 360
+ + + RL+ +RA Y C P RP S++VE L L
Sbjct: 244 GVKIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
Query: 361 QCAN 364
AN
Sbjct: 300 LQAN 303
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDK--PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ E+ +G+L +L + VP +++ +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 148 SCTYQLARGMEYL--ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTA----TCRTVAVKML-KEGATHSEHRALMSELKILIHIGH 80
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP------------LSWAT 184
H N+V L+G C + L+V EF G+L +L R VP L+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 185 RMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 244
+ +F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 141 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARP 304
+ APE + T +SDV+SFGV+L E+ SL P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYP 243
Query: 305 KLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPL 360
+ + + RL+ +RA Y C P RP S++VE L L
Sbjct: 244 GVKIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
Query: 361 QCAN 364
AN
Sbjct: 300 LQAN 303
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRT----VAVKML-KEGATHSEHRALMSELKILIHIGH 89
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP------------LSWAT 184
H N+V L+G C + L+V EF G+L +L R VP L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 185 RMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 244
+ +F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 150 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARP 304
+ APE + T +SDV+SFGV+L E+ SL P
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYP 252
Query: 305 KLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPL 360
+ + + RL+ +RA Y C P RP S++VE L L
Sbjct: 253 GVKIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
Query: 361 QCAN 364
AN
Sbjct: 309 LQAN 312
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPK--EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ E+ +G+L +L + VP +++ +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 150 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPK--EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ E+ +G+L +L + VP +++ +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 153 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 72 LGRGAFGQVIEADAFGIDKTA----TCRTVAVKML-KEGATHSEHRALMSELKILIHIGH 126
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP------------LSWAT 184
H N+V L+G C + L+V EF G+L +L R VP L+
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 185 RMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 244
+ +F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 187 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARP 304
+ APE + T +SDV+SFGV+L E+ SL P
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYP 289
Query: 305 KLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPL 360
+ + + RL+ +RA Y C P RP S++VE L L
Sbjct: 290 GVKIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
Query: 361 QCAN 364
AN
Sbjct: 346 LQAN 349
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH---REWLTEVNFLGQLRHPN 142
LG+G FG VY +N + +A+KVL K L+ + E+ LRHPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFI------MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
++++ Y + L+ EF RG L L + + M A L + H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL--ADALHYCH-- 131
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM-GTYGYAAPEYVMT 261
ER VI+RD K N+L+ K++DFG + P + R M GT Y PE +
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEG 186
Query: 262 GHLTARSDVYSFGVVLLELLTGRKSVD 288
+ D++ GV+ E L G D
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH---REWLTEVNFLGQLRHPN 142
LG+G FG VY +N + +A+KVL K L+ + E+ LRHPN
Sbjct: 22 LGKGKFGNVYLAREKQNKFI------MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
++++ Y + L+ EF RG L L + + M A L + H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL--ADALHYCH-- 131
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM-GTYGYAAPEYVMT 261
ER VI+RD K N+L+ K++DFG + P + R M GT Y PE +
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEG 186
Query: 262 GHLTARSDVYSFGVVLLELLTGRKSVD 288
+ D++ GV+ E L G D
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 125/304 (41%), Gaps = 51/304 (16%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGL--QGHREWLTEVNFLGQL-R 139
LG G FG V + ID+ VAVK+L KEG HR ++E+ L +
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRT----VAVKML-KEGATHSEHRALMSELKILIHIGH 91
Query: 140 HPNLVKLIGYCCEDDHRLLVY-EFMFRGSLENHLF--RKATVP------------LSWAT 184
H N+V L+G C + L+V EF G+L +L R VP L+
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 185 RMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 244
+ +F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 152 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARP 304
+ APE + T +SDV+SFGV+L E+ SL P
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYP 254
Query: 305 KLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPL 360
+ + + RL+ +RA Y C P RP S++VE L L
Sbjct: 255 GVKIDEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
Query: 361 QCAN 364
AN
Sbjct: 311 LQAN 314
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V V+ A+K+L KE + E LTE L RHP
Sbjct: 17 LLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 70
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAFL 199
L L D V E+ G L HL R+ A +GA L +L
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR----FYGAEIVSALDYL 126
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H +E+ V+YRD K N++LD D K++DFGL K G + T GT Y APE +
Sbjct: 127 H-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVL 183
Query: 260 MTGHLTARSDVYSFGVVLLELLTGR 284
D + GVV+ E++ GR
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH---REWLTEVNFLGQLRHPN 142
LG+G FG VY +N + +A+KVL K L+ + E+ LRHPN
Sbjct: 23 LGKGKFGNVYLAREKQNKFI------MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
++++ Y + L+ EF RG L L + + M A L + H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL--ADALHYCH-- 132
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM-GTYGYAAPEYVMT 261
ER VI+RD K N+L+ K++DFG + P + R M GT Y PE +
Sbjct: 133 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEG 187
Query: 262 GHLTARSDVYSFGVVLLELLTGRKSVD 288
+ D++ GV+ E L G D
Sbjct: 188 KTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
LGEG G V RV ++ VAVK+++ K + E+ L H N+V
Sbjct: 14 LGEGAAGEVQLAV----NRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G+ E + + L E+ G L + + +P A R A G+ +LH
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+ +RD K N+LLD K+SDFGLA + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 265 TARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK--LNDKRKMLQIIDPRLE 321
A DV+S G+VL +L G D+ S Q DW K LN +K+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDWKEKKTYLNPWKKI--------- 233
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
+L + L +NP AR + D+
Sbjct: 234 -------DSAPLALLHKILVENPSARITIPDI 258
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V V+ A+K+L KE + E LTE L RHP
Sbjct: 15 LLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 68
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAFL 199
L L D V E+ G L HL R+ A +GA L +L
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR----FYGAEIVSALDYL 124
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H +E+ V+YRD K N++LD D K++DFGL K G + T GT Y APE +
Sbjct: 125 H-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVL 181
Query: 260 MTGHLTARSDVYSFGVVLLELLTGR 284
D + GVV+ E++ GR
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWL-TEVNFLGQLRHPNL 143
+LG G F V + E+ R VA+K + K+ L+G + E+ L +++HPN+
Sbjct: 25 VLGTGAFSEVI---LAEDKRT---QKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNI 78
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V L H L+ + + G L + + K A+R++ F + +LH+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI--FQVLDAVKYLHDL- 135
Query: 204 RPVIYRDFKTSNIL---LDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++RD K N+L LD D +SDFGL+K G V + GT GY APE +
Sbjct: 136 -GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLA 191
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
+ D +S GV+ LL G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDK--PKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ E+ +G+L +L + VP +++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + +++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V V+ A+K+L KE + E LTE L RHP
Sbjct: 16 LLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 69
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAFL 199
L L D V E+ G L HL R+ A +GA L +L
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR----FYGAEIVSALDYL 125
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H +E+ V+YRD K N++LD D K++DFGL K G + T GT Y APE +
Sbjct: 126 H-SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVL 182
Query: 260 MTGHLTARSDVYSFGVVLLELLTGR 284
D + GVV+ E++ GR
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE---GLQGHREWLTEVNFLGQLRHPN 142
LG G FG V+ N R A+KVL KE L+ E L + HP
Sbjct: 14 LGTGSFGRVHLIRSRHNGRY------YAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK---GLAFL 199
++++ G + ++ +++ G L + L + P A F AA+ L +L
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA-----KFYAAEVCLALEYL 122
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H+ + +IYRD K NILLD + K++DFG AK P V+ + GT Y APE V
Sbjct: 123 HSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVV 175
Query: 260 MTGHLTARSDVYSFGVVLLELLTG 283
T D +SFG+++ E+L G
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 73 LETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTE 131
+E F LG G G V+K V L +A K+++ E R + + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 132 VNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG 191
+ L + P +V G D + E M GSL+ L + +P ++ IA
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 112
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
KGL +L + +++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 113 VIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRK 311
Y +PE + H + +SD++S G+ L+E+ GR + +KE S RP +
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD-AKEDS-----RPPM----A 217
Query: 312 MLQIIDPRLENQYSVRAAQKACSLAYY-----CLSQNPKAR 347
+ +++D + N+ + SL + CL +NP R
Sbjct: 218 IFELLD-YIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 257
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V VR A+K+L KE + E +TE L RHP
Sbjct: 15 LLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAF 198
L L Y + RL V E+ G L HL R+ A +GA L +
Sbjct: 69 FLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR----FYGAEIVSALEY 123
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
LH+ R V+YRD K N++LD D K++DFGL K G T + GT Y APE
Sbjct: 124 LHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEV 179
Query: 259 VMTGHLTARSDVYSFGVVLLELLTGR 284
+ D + GVV+ E++ GR
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPNLV 144
LG GGFG V + +I ++ VA+K +E +RE W E+ + +L HPN+V
Sbjct: 23 LGTGGFGYVLR-WIHQDT-----GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 145 KL------IGYCCEDDHRLLVYEFMFRGSLENHL--FRKATVPLSWATRMMIAFGAAKGL 196
+ +D LL E+ G L +L F R +++ + L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSAL 135
Query: 197 AFLHNAERPVIYRDFKTSNILLD---SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+LH E +I+RD K NI+L K+ D G AK QG+ + T +GT Y
Sbjct: 136 RYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQY 190
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE + T D +SFG + E +TG
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 75 TITKSFRSDYI--LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
TI + YI LG+G FG+V Y D + VAVK L G R++
Sbjct: 5 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGAL------VAVKQLQHSGPDQQRDF 58
Query: 129 LTEVNFLGQLRHPNLVKLIG--YCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM 186
E+ L L +VK G Y LV E++ G L + L R L + +
Sbjct: 59 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLL 117
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ + KG+ +L R ++RD NIL++S+ K++DFGLAK P D+ + R
Sbjct: 118 LYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVR 174
Query: 247 VMGTYG--YAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
G + APE + + +SDV+SFGVVL EL T
Sbjct: 175 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG G G V+K V L +A K+++ E R + + E+ L + P +V
Sbjct: 76 LGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
G D + E M GSL+ L + +P ++ IA KGL +L +
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK 187
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+++RD K SNIL++S KL DFG++ G D ++ +GT Y +PE + H
Sbjct: 188 -IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHY 242
Query: 265 TARSDVYSFGVVLLELLTGR 284
+ +SD++S G+ L+E+ GR
Sbjct: 243 SVQSDIWSMGLSLVEMAVGR 262
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 37 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 90
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL +C +DD +L + G L ++ RK TR A
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 147
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 148 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPNLV 144
LG GGFG V + +I ++ VA+K +E +RE W E+ + +L HPN+V
Sbjct: 22 LGTGGFGYVLR-WIHQDT-----GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 145 KL------IGYCCEDDHRLLVYEFMFRGSLENHL--FRKATVPLSWATRMMIAFGAAKGL 196
+ +D LL E+ G L +L F R +++ + L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSAL 134
Query: 197 AFLHNAERPVIYRDFKTSNILLD---SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+LH E +I+RD K NI+L K+ D G AK QG+ + T +GT Y
Sbjct: 135 RYLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQY 189
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE + T D +SFG + E +TG
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 21/219 (9%)
Query: 77 TKSFRSD-YILGEG-GFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT---E 131
T S SD Y LGE GFG + + ++ ++R+ VAVKVL + + +L E
Sbjct: 6 TPSHLSDRYELGEILGFGGMSEVHLARDLRLHRD---VAVKVLRADLARDPSFYLRFRRE 62
Query: 132 VNFLGQLRHPNLVKLIGYCCEDDHR------LLVYEFMFRGSLENHLFRKATVPLSWATR 185
L HP +V + Y + +V E++ +L + + + P++
Sbjct: 63 AQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRA 118
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-GPQGDETHVS 244
+ + A + L F H + +I+RD K +NI++ + K+ DFG+A+A G+ +
Sbjct: 119 IEVIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 245 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
V+GT Y +PE + ARSDVYS G VL E+LTG
Sbjct: 177 AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 86 LGEGGFGTVYKG-YID-ENVRVGLKSLPVAVKVLNKEGLQGHRE-WLTEVNFLGQLRHPN 142
+GEG FG V++G Y+ EN ++ VA+K RE +L E + Q HP+
Sbjct: 18 IGEGQFGDVHQGIYMSPEN-----PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 72
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHL-FRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+VKLIG E+ ++ E G L + L RK ++ L A+ ++ A+ + LA+L +
Sbjct: 73 IVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDL--ASLILYAYQLSTALAYLES 129
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV-STRVMGTYGYAAPEYVM 260
+ ++RD N+L+ + KL DFGL++ D T+ +++ + APE +
Sbjct: 130 --KRFVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESIN 185
Query: 261 TGHLTARSDVYSFGVVLLELL 281
T+ SDV+ FGV + E+L
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 75 TITKSFRSDYI--LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
TI + YI LG+G FG+V Y D + VAVK L G R++
Sbjct: 2 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGAL------VAVKQLQHSGPDQQRDF 55
Query: 129 LTEVNFLGQLRHPNLVKLIG--YCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM 186
E+ L L +VK G Y LV E++ G L + L R L + +
Sbjct: 56 QREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLL 114
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGP-QGDETHVST 245
+ + KG+ +L R ++RD NIL++S+ K++DFGLAK P D V
Sbjct: 115 LYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVRE 172
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + + +SDV+SFGVVL EL T
Sbjct: 173 PGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G+G GTVY +V G + VA++ +N + + E+ + + ++PN+V
Sbjct: 28 IGQGASGTVYTAM---DVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
+ D +V E++ GSL + + + + + L FLH+ +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGL-AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
VI+RD K+ NILL D + KL+DFG A+ P E + ++GT + APE V
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSEMVGTPYWMAPEVVTRKAY 193
Query: 265 TARSDVYSFGVVLLELLTGR 284
+ D++S G++ +E++ G
Sbjct: 194 GPKVDIWSLGIMAIEMIEGE 213
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V VR A+K+L KE + E +TE L RHP
Sbjct: 12 LLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAF 198
L L Y + RL V E+ G L HL R+ A +GA L +
Sbjct: 66 FLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR----FYGAEIVSALEY 120
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
LH+ R V+YRD K N++LD D K++DFGL K G T + GT Y APE
Sbjct: 121 LHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEV 176
Query: 259 VMTGHLTARSDVYSFGVVLLELLTGR 284
+ D + GVV+ E++ GR
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 75 TITKSFRSDYI--LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
TI + YI LG+G FG+V Y D + VAVK L G R++
Sbjct: 18 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGAL------VAVKQLQHSGPDQQRDF 71
Query: 129 LTEVNFLGQLRHPNLVKLIG--YCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM 186
E+ L L +VK G Y LV E++ G L + L R L + +
Sbjct: 72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLL 130
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ + KG+ +L R ++RD NIL++S+ K++DFGLAK P D+ + R
Sbjct: 131 LYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVR 187
Query: 247 VMGTYG--YAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
G + APE + + +SDV+SFGVVL EL T
Sbjct: 188 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 75 TITKSFRSDYI--LGEGGFGTV----YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
TI + YI LG+G FG+V Y D + VAVK L G R++
Sbjct: 6 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGAL------VAVKQLQHSGPDQQRDF 59
Query: 129 LTEVNFLGQLRHPNLVKLIG--YCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM 186
E+ L L +VK G Y LV E++ G L + L R L + +
Sbjct: 60 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLL 118
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ + KG+ +L R ++RD NIL++S+ K++DFGLAK P D+ + R
Sbjct: 119 LYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVR 175
Query: 247 VMGTYG--YAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
G + APE + + +SDV+SFGVVL EL T
Sbjct: 176 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V VR A+K+L KE + E +TE L RHP
Sbjct: 12 LLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAF 198
L L Y + RL V E+ G L HL R+ A +GA L +
Sbjct: 66 FLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR----FYGAEIVSALEY 120
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
LH+ R V+YRD K N++LD D K++DFGL K G T + GT Y APE
Sbjct: 121 LHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEV 176
Query: 259 VMTGHLTARSDVYSFGVVLLELLTGR 284
+ D + GVV+ E++ GR
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQLRHPNLV 144
+GEG +G V Y ++VR VA+K ++ Q + + L E+ L + RH N++
Sbjct: 51 IGEGAYGMVSSAY--DHVR----KTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+ + ++ + +E L++ + LS + +GL ++H+A
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN 164
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAK-AGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
V++RD K SN+L+++ K+ DFGLA+ A P+ D T T + T Y APE ++
Sbjct: 165 --VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 263 HLTARS-DVYSFGVVLLELLTGR 284
+S D++S G +L E+L+ R
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G+G GTVY +V G + VA++ +N + + E+ + + ++PN+V
Sbjct: 28 IGQGASGTVYTAM---DVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
+ D +V E++ GSL + + + + + L FLH+ +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGL-AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
VI+RD K+ NILL D + KL+DFG A+ P+ ++ ST V GT + APE V
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMV-GTPYWMAPEVVTRKAY 193
Query: 265 TARSDVYSFGVVLLELLTGR 284
+ D++S G++ +E++ G
Sbjct: 194 GPKVDIWSLGIMAIEMIEGE 213
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V VR A+K+L KE + E +TE L RHP
Sbjct: 12 LLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAF 198
L L Y + RL V E+ G L HL R+ A +GA L +
Sbjct: 66 FLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR----FYGAEIVSALEY 120
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
LH+ R V+YRD K N++LD D K++DFGL K G T GT Y APE
Sbjct: 121 LHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 176
Query: 259 VMTGHLTARSDVYSFGVVLLELLTGR 284
+ D + GVV+ E++ GR
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V VR A+K+L KE + E +TE L RHP
Sbjct: 17 LLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAF 198
L L Y + RL V E+ G L HL R+ A +GA L +
Sbjct: 71 FLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR----FYGAEIVSALEY 125
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
LH+ R V+YRD K N++LD D K++DFGL K G T GT Y APE
Sbjct: 126 LHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 181
Query: 259 VMTGHLTARSDVYSFGVVLLELLTGR 284
+ D + GVV+ E++ GR
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V VR A+K+L KE + E +TE L RHP
Sbjct: 12 LLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAF 198
L L Y + RL V E+ G L HL R+ A +GA L +
Sbjct: 66 FLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR----FYGAEIVSALEY 120
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
LH+ R V+YRD K N++LD D K++DFGL K G T GT Y APE
Sbjct: 121 LHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 176
Query: 259 VMTGHLTARSDVYSFGVVLLELLTGR 284
+ D + GVV+ E++ GR
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 77 TKSFRSD-YILGEG-GFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT---E 131
T S SD Y LGE GFG + + ++ ++R VAVKVL + + +L E
Sbjct: 6 TPSHLSDRYELGEILGFGGMSEVHLARDLR---DHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 132 VNFLGQLRHPNLVKL--IGYCCEDDHRL--LVYEFMFRGSLENHLFRKATVPLSWATRMM 187
L HP +V + G L +V E++ +L + + + P++ +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-GPQGDETHVSTR 246
+ A + L F H + +I+RD K +NIL+ + K+ DFG+A+A G+ +
Sbjct: 121 VIADACQALNFSH--QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAA 178
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
V+GT Y +PE + ARSDVYS G VL E+LTG
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 16/232 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G+G GTVY +V G + VA++ +N + + E+ + + ++PN+V
Sbjct: 28 IGQGASGTVYTAM---DVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
+ D +V E++ GSL + + + + + L FLH+ +
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQ-- 136
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGL-AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
VI+RD K+ NILL D + KL+DFG A+ P E + ++GT + APE V
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSXMVGTPYWMAPEVVTRKAY 193
Query: 265 TARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDW-ARPKLNDKRKMLQI 315
+ D++S G++ +E++ G P + L+ P+L + K+ I
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 245
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G+G GTVY +V G + VA++ +N + + E+ + + ++PN+V
Sbjct: 29 IGQGASGTVYTAM---DVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
+ D +V E++ GSL + + + + + L FLH+ +
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQ-- 137
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGL-AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
VI+RD K+ NILL D + KL+DFG A+ P E + ++GT + APE V
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSXMVGTPYWMAPEVVTRKAY 194
Query: 265 TARSDVYSFGVVLLELLTGR 284
+ D++S G++ +E++ G
Sbjct: 195 GPKVDIWSLGIMAIEMIEGE 214
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V VR A+K+L KE + E +TE L RHP
Sbjct: 12 LLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA--AKGLAF 198
L L Y + RL V E+ G L HL R+ A +GA L +
Sbjct: 66 FLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR----FYGAEIVSALEY 120
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
LH+ R V+YRD K N++LD D K++DFGL K G T GT Y APE
Sbjct: 121 LHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 176
Query: 259 VMTGHLTARSDVYSFGVVLLELLTGR 284
+ D + GVV+ E++ GR
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 14/216 (6%)
Query: 73 LETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTE 131
+E F LG G G V+K V L +A K+++ E R + + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 132 VNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG 191
+ L + P +V G D + E M GSL+ L + +P ++ IA
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 112
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
KGL +L + +++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 113 VIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSV 287
Y +PE + H + +SD++S G+ L+E+ GR +
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG G G V+K V L +A K+++ E R + + E+ L + P +V
Sbjct: 41 LGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
G D + E M GSL+ L + +P ++ IA KGL +L +
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK 152
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+++RD K SNIL++S KL DFG++ G D ++ +GT Y +PE + H
Sbjct: 153 -IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHY 207
Query: 265 TARSDVYSFGVVLLELLTGR 284
+ +SD++S G+ L+E+ GR
Sbjct: 208 SVQSDIWSMGLSLVEMAVGR 227
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 77 TKSFRSD-YILGEG-GFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT---E 131
T S SD Y LGE GFG + + ++ ++R+ VAVKVL + + +L E
Sbjct: 6 TPSHLSDRYELGEILGFGGMSEVHLARDLRLHRD---VAVKVLRADLARDPSFYLRFRRE 62
Query: 132 VNFLGQLRHPNLVKL--IGYCCEDDHRL--LVYEFMFRGSLENHLFRKATVPLSWATRMM 187
L HP +V + G L +V E++ +L + + + P++ +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-GPQGDETHVSTR 246
+ A + L F H + +I+RD K +NI++ + K+ DFG+A+A G+ +
Sbjct: 121 VIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
V+GT Y +PE + ARSDVYS G VL E+LTG
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 14/216 (6%)
Query: 73 LETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTE 131
+E F LG G G V+K V L +A K+++ E R + + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 132 VNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG 191
+ L + P +V G D + E M GSL+ L + +P ++ IA
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 112
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
KGL +L + +++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 113 VIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSV 287
Y +PE + H + +SD++S G+ L+E+ GR +
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK--EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ + +G+L +L + VP +++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 20 LGKGKFGNVYLA------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--ANALSYCHS- 130
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S+ K++DFG + P T + GT Y PE +
Sbjct: 131 -KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGR 185
Query: 263 HLTARSDVYSFGVVLLELLTG 283
+ D++S GV+ E L G
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG 206
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 14/216 (6%)
Query: 73 LETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTE 131
+E F LG G G V+K V L +A K+++ E R + + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 132 VNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG 191
+ L + P +V G D + E M GSL+ L + +P ++ IA
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 112
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
KGL +L + +++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 113 VIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSV 287
Y +PE + H + +SD++S G+ L+E+ GR +
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 14/216 (6%)
Query: 73 LETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTE 131
+E F LG G G V+K V L +A K+++ E R + + E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 132 VNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFG 191
+ L + P +V G D + E M GSL+ L + +P ++ IA
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-- 112
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTY 251
KGL +L + +++RD K SNIL++S KL DFG++ G D ++ +GT
Sbjct: 113 VIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTR 167
Query: 252 GYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSV 287
Y +PE + H + +SD++S G+ L+E+ GR +
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 24/222 (10%)
Query: 70 LFELETITKSFRSDYILGEGGFGTVYK-GYIDENVRVGLKSLP--VAVKVLNKEGLQGHR 126
L + T+ + R + LG+GGF Y+ +D K +P + +K KE +
Sbjct: 35 LVDPRTMKRYMRGRF-LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--- 90
Query: 127 EWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-ENHLFRKA-TVPLS-WA 183
TE+ L +P++V G+ +DD +V E R SL E H RKA T P + +
Sbjct: 91 ---TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA-KAGPQGDETH 242
R I +G+ +LHN VI+RD K N+ L+ D K+ DFGLA K G+
Sbjct: 148 MRQTI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 200
Query: 243 VSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGR 284
+ GT Y APE + + D++S G +L LL G+
Sbjct: 201 T---LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 24/222 (10%)
Query: 70 LFELETITKSFRSDYILGEGGFGTVYK-GYIDENVRVGLKSLP--VAVKVLNKEGLQGHR 126
L + T+ + R + LG+GGF Y+ +D K +P + +K KE +
Sbjct: 35 LVDPRTMKRYMRGRF-LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--- 90
Query: 127 EWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-ENHLFRKA-TVPLS-WA 183
TE+ L +P++V G+ +DD +V E R SL E H RKA T P + +
Sbjct: 91 ---TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA-KAGPQGDETH 242
R I +G+ +LHN VI+RD K N+ L+ D K+ DFGLA K G+
Sbjct: 148 MRQTI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-- 198
Query: 243 VSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGR 284
+ GT Y APE + + D++S G +L LL G+
Sbjct: 199 -KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 80 FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLG 136
++ +LG+G FG V + + AVKV++K ++ + L EV L
Sbjct: 51 YKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGL 196
QL HPN++KL + + + LV E G L + + + A R++ G+
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ--VLSGI 162
Query: 197 AFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
++H + +++RD K N+LL+S D ++ DFGL+ + + +GT Y
Sbjct: 163 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYY 217
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE V+ G + DV+S GV+L LL+G
Sbjct: 218 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 127 EWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM 186
+ + E+ L + P +V G D + E M GSL+ L +P ++
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKV 119
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
IA +GLA+L + +++RD K SNIL++S KL DFG++ G D ++
Sbjct: 120 SIA--VLRGLAYLREKHQ-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANS 172
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSV 287
+GT Y APE + H + +SD++S G+ L+EL GR +
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 80 FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLG 136
++ +LG+G FG V + + AVKV++K ++ + L EV L
Sbjct: 52 YKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGL 196
QL HPN++KL + + + LV E G L + + + A R++ G+
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ--VLSGI 163
Query: 197 AFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
++H + +++RD K N+LL+S D ++ DFGL+ + + +GT Y
Sbjct: 164 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYY 218
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE V+ G + DV+S GV+L LL+G
Sbjct: 219 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 77 TKSFRSD-YILGEG-GFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT---E 131
T S SD Y LGE GFG + + ++ ++R VAVKVL + + +L E
Sbjct: 6 TPSHLSDRYELGEILGFGGMSEVHLARDLR---DHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 132 VNFLGQLRHPNLVKL--IGYCCEDDHRL--LVYEFMFRGSLENHLFRKATVPLSWATRMM 187
L HP +V + G L +V E++ +L + + + P++ +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-GPQGDETHVSTR 246
+ A + L F H + +I+RD K +NI++ + K+ DFG+A+A G+ +
Sbjct: 121 VIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
V+GT Y +PE + ARSDVYS G VL E+LTG
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 24/222 (10%)
Query: 70 LFELETITKSFRSDYILGEGGFGTVYK-GYIDENVRVGLKSLP--VAVKVLNKEGLQGHR 126
L + T+ + R + LG+GGF Y+ +D K +P + +K KE +
Sbjct: 35 LVDPRTMKRYMRGRF-LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--- 90
Query: 127 EWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-ENHLFRKA-TVPLS-WA 183
TE+ L +P++V G+ +DD +V E R SL E H RKA T P + +
Sbjct: 91 ---TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 147
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA-KAGPQGDETH 242
R I +G+ +LHN VI+RD K N+ L+ D K+ DFGLA K G+
Sbjct: 148 MRQTI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-- 198
Query: 243 VSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGR 284
+ GT Y APE + + D++S G +L LL G+
Sbjct: 199 -KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 23/216 (10%)
Query: 86 LGEGGFGTVYKGY---IDENVRVGLKSLPVAVKVLNKEGLQGH-REWLTEVNFLGQL-RH 140
LGEG FG V ID++ +++ VAVK+L + + + ++E+ + + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPK--EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----------FRKATVP---LSWATRM 186
N++ L+G C +D ++ + +G+L +L + VP +++ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR 246
+ A+G+ +L A + I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 80 FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLG 136
++ +LG+G FG V + + AVKV++K ++ + L EV L
Sbjct: 28 YKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGL 196
QL HPN++KL + + + LV E G L + + + A R I G+
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGI 139
Query: 197 AFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
++H + +++RD K N+LL+S D ++ DFGL+ + + +GT Y
Sbjct: 140 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYY 194
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE V+ G + DV+S GV+L LL+G
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 77 TKSFRSD-YILGEG-GFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT---E 131
T S SD Y LGE GFG + + ++ ++R VAVKVL + + +L E
Sbjct: 6 TPSHLSDRYELGEILGFGGMSEVHLARDLR---DHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 132 VNFLGQLRHPNLVKL--IGYCCEDDHRL--LVYEFMFRGSLENHLFRKATVPLSWATRMM 187
L HP +V + G L +V E++ +L + + + P++ +
Sbjct: 63 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-GPQGDETHVSTR 246
+ A + L F H + +I+RD K +NI++ + K+ DFG+A+A G+ +
Sbjct: 121 VIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
V+GT Y +PE + ARSDVYS G VL E+LTG
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LG G G V+K V L +A K+++ E R + + E+ L + P +V
Sbjct: 33 LGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
G D + E M GSL+ L + +P ++ IA KGL +L +
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK 144
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
+++RD K SNIL++S KL DFG++ G D ++ +GT Y +PE + H
Sbjct: 145 -IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERLQGTHY 199
Query: 265 TARSDVYSFGVVLLELLTGR 284
+ +SD++S G+ L+E+ GR
Sbjct: 200 SVQSDIWSMGLSLVEMAVGR 219
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 80 FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLG 136
++ +LG+G FG V + + AVKV++K ++ + L EV L
Sbjct: 34 YKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGL 196
QL HPN++KL + + + LV E G L + + + A R++ G+
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ--VLSGI 145
Query: 197 AFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
++H + +++RD K N+LL+S D ++ DFGL+ + + +GT Y
Sbjct: 146 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYY 200
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE V+ G + DV+S GV+L LL+G
Sbjct: 201 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVN-FLGQLRH 140
++G+G FG V R + + AVKVL K+ + +E ++E N L ++H
Sbjct: 45 VIGKGSFGKVLLA------RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
P LV L D V +++ G L HL R+ L R A A L +LH
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF-LEPRARFYAA-EIASALGYLH 156
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ ++YRD K NILLDS L+DFGL K + + T ++ GT Y APE +
Sbjct: 157 SLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEYLAPEVLH 212
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
D + G VL E+L G
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 77 TKSFRSD-YILGEG-GFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT---E 131
T S SD Y LGE GFG + + ++ ++R+ VAVKVL + + +L E
Sbjct: 23 TPSHLSDRYELGEILGFGGMSEVHLARDLRLHRD---VAVKVLRADLARDPSFYLRFRRE 79
Query: 132 VNFLGQLRHPNLVKLIGYCCEDDHR----LLVYEFMFRGSLENHLFRKATVPLSWATRMM 187
L HP +V + + +V E++ +L + + + P++ +
Sbjct: 80 AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIE 137
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-GPQGDETHVSTR 246
+ A + L F H + +I+RD K +NI++ + K+ DFG+A+A G+ +
Sbjct: 138 VIADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA 195
Query: 247 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
V+GT Y +PE + ARSDVYS G VL E+LTG
Sbjct: 196 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 24/222 (10%)
Query: 70 LFELETITKSFRSDYILGEGGFGTVYK-GYIDENVRVGLKSLP--VAVKVLNKEGLQGHR 126
L + T+ + R + LG+GGF Y+ +D K +P + +K KE +
Sbjct: 19 LVDPRTMKRYMRGRF-LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS--- 74
Query: 127 EWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-ENHLFRKA-TVPLS-WA 183
TE+ L +P++V G+ +DD +V E R SL E H RKA T P + +
Sbjct: 75 ---TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF 131
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA-KAGPQGDETH 242
R I +G+ +LHN VI+RD K N+ L+ D K+ DFGLA K G+
Sbjct: 132 MRQTI-----QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-- 182
Query: 243 VSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGR 284
+ GT Y APE + + D++S G +L LL G+
Sbjct: 183 -KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 27/241 (11%)
Query: 52 LEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLP 111
LE S A Y + +++E+ + R +G G +G+V Y + R+ K
Sbjct: 5 LEMSGPRAGFYRQELNKTVWEVPQRLQGLRP---VGSGAYGSVCSAY---DARLRQK--- 55
Query: 112 VAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNLVKLI-----GYCCEDDHRLLVYEFMF 164
VAVK L++ + L R E+ L L+H N++ L+ ED + + +
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 165 RGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA 224
L N + +A LS + + +GL ++H+A +I+RD K SN+ ++ D
Sbjct: 116 GADLNNIVKSQA---LSDEHVQFLVYQLLRGLKYIHSA--GIIHRDLKPSNVAVNEDSEL 170
Query: 225 KLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTG 283
++ DFGLA+ + +V+TR Y APE ++ H D++S G ++ ELL G
Sbjct: 171 RILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 284 R 284
+
Sbjct: 226 K 226
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 18/209 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V R G + L A+K+L K+ + + + E L L P
Sbjct: 26 VLGKGSFGKVMLA-----DRKGTEEL-YAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
+ + C + RL V E++ G L H+ + + A + GL FLH
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLH 137
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR-VMGTYGYAAPEYV 259
+R +IYRD K N++LDS+ K++DFG+ K V+TR GT Y APE +
Sbjct: 138 --KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM---DGVTTREFCGTPDYIAPEII 192
Query: 260 MTGHLTARSDVYSFGVVLLELLTGRKSVD 288
D +++GV+L E+L G+ D
Sbjct: 193 AYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V Y +V+ GLK +AVK L++ + + + E+ L ++H N+
Sbjct: 59 VGSGAYGSVCSSY---DVKSGLK---IAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 113 IGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLK 168
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 169 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 221
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 16/232 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G+G GTVY +V G + VA++ +N + + E+ + + ++PN+V
Sbjct: 29 IGQGASGTVYTAM---DVATGQE---VAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
+ D +V E++ GSL + + + + + L FLH+ +
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQ-- 137
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGL-AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
VI+R+ K+ NILL D + KL+DFG A+ P+ ++ ST V GT + APE V
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMV-GTPYWMAPEVVTRKAY 194
Query: 265 TARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDW-ARPKLNDKRKMLQI 315
+ D++S G++ +E++ G P + L+ P+L + K+ I
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI 246
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 80 FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLG 136
++ +LG+G FG V + + AVKV++K ++ + L EV L
Sbjct: 28 YKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGL 196
QL HPN+ KL + + + LV E G L + + + A R++ G+
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ--VLSGI 139
Query: 197 AFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
+ H + +++RD K N+LL+S D ++ DFGL+ + + +GT Y
Sbjct: 140 TYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDKIGTAYY 194
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE V+ G + DV+S GV+L LL+G
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTA-EIV 142
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-GPQGDETHVSTRVMGTYG 252
L +LH + +I+RD K NILL+ D +++DFG AK P+ + ++ V GT
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQ 199
Query: 253 YAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
Y +PE + + SD+++ G ++ +L+ G
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 27/241 (11%)
Query: 52 LEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLP 111
LE S A Y + +++E+ + R +G G +G+V Y + R+ K
Sbjct: 5 LEMSGPRAGFYRQELNKTVWEVPQRLQGLRP---VGSGAYGSVCSAY---DARLRQK--- 55
Query: 112 VAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNLVKLI-----GYCCEDDHRLLVYEFMF 164
VAVK L++ + L R E+ L L+H N++ L+ ED + + +
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 165 RGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA 224
L N + +A LS + + +GL ++H+A +I+RD K SN+ ++ D
Sbjct: 116 GADLNNIVKCQA---LSDEHVQFLVYQLLRGLKYIHSA--GIIHRDLKPSNVAVNEDSEL 170
Query: 225 KLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTG 283
++ DFGLA+ + +V+TR Y APE ++ H D++S G ++ ELL G
Sbjct: 171 RILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 284 R 284
+
Sbjct: 226 K 226
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG---HREWLTEVNFLGQLRHPN 142
LG+G FG VY R +A+KVL K L+ + EV LRHPN
Sbjct: 20 LGKGKFGNVYLA------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+++L GY + L+ E+ G++ L + + + A L++ H+
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--ANALSYCHS- 130
Query: 203 ERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG 262
+ VI+RD K N+LL S+ K++DFG + P + GT Y PE +
Sbjct: 131 -KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEGR 185
Query: 263 HLTARSDVYSFGVVLLELLTG 283
+ D++S GV+ E L G
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG 206
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 33 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 86
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 87 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 143
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-GPQGDETHVSTRVMGTYG 252
L +LH + +I+RD K NILL+ D +++DFG AK P+ + ++ V GT
Sbjct: 144 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQ 200
Query: 253 YAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
Y +PE + SD+++ G ++ +L+ G
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V Y + R+ K VAVK L++ + L R E+ L L+H N+
Sbjct: 28 VGSGAYGSVCSAY---DARLRQK---VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 144 VKLI-----GYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAF 198
+ L+ ED + + + L N + +A LS + + +GL +
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LSDEHVQFLVYQLLRGLKY 138
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
+H+A +I+RD K SN+ ++ D ++ DFGLA+ + +V+TR Y APE
Sbjct: 139 IHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEI 191
Query: 259 VMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELL G+
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 10 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 63
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 64 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 120
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 121 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 9 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 62
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 63 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 119
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 120 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 29 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 82
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 83 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 139
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-GPQGDETHVSTRVMGTYG 252
L +LH + +I+RD K NILL+ D +++DFG AK P+ + ++ V GT
Sbjct: 140 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQ 196
Query: 253 YAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
Y +PE + SD+++ G ++ +L+ G
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 7 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 60
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 61 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 117
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 118 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 8 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 61
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 62 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 118
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 119 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 140
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-GPQGDETHVSTRVMGTYG 252
L +LH + +I+RD K NILL+ D +++DFG AK P+ + + V GT
Sbjct: 141 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GTAQ 197
Query: 253 YAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
Y +PE + SD+++ G ++ +L+ G
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 33 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 86
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 87 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 143
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 144 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 140
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 141 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 142
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 14 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 67
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 68 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 124
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 125 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 142
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 140
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 141 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 120/248 (48%), Gaps = 29/248 (11%)
Query: 46 PSTPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRV 105
P LE S++ Y + +++E + + +++ +G G +G+V + + +
Sbjct: 16 PRGSHMLEMSQERPTFYRQELNKTIWE---VPERYQNLSPVGSGAYGSVCAAF---DTKT 69
Query: 106 GLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRL 157
GL+ VAVK L++ + + + E+ L ++H N++ L+ E +
Sbjct: 70 GLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 126
Query: 158 LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNIL 217
LV M G+ N++ + L+ + + +GL ++H+A+ +I+RD K SN+
Sbjct: 127 LVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLA 180
Query: 218 LDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVV 276
++ D K+ DFGLA+ +V+TR Y APE ++ H D++S G +
Sbjct: 181 VNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 277 LLELLTGR 284
+ ELLTGR
Sbjct: 236 MAELLTGR 243
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFL 135
+ F +LG+G FG+V + + + +K VAVK+L + + E+L E +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVK---VAVKMLKADIIASSDIEEFLREAACM 79
Query: 136 GQLRHPNLVKLIGYCCEDDHR------LLVYEFMFRGSLENHLFRKAT--------VPLS 181
+ HP++ KL+G + +++ FM G L H F A+ +PL
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL--HAFLLASRIGENPFNLPLQ 137
Query: 182 WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET 241
R M+ A G+ +L + R I+RD N +L D T ++DFGL++ GD
Sbjct: 138 TLVRFMVDI--ACGMEYL--SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 242 HVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
+ A E + T SDV++FGV + E++T
Sbjct: 194 RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 142
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 35 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 88
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 89 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 145
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 146 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQK--LTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 142
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 29 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 82
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 83 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 139
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 140 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F TV R S A+K+L K + + ++T E +
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 86 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 142
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 143 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 119/242 (49%), Gaps = 29/242 (11%)
Query: 52 LEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLP 111
LE S++ Y + +++E + + +++ +G G +G+V + + + GL+
Sbjct: 5 LEMSQERPTFYRQELNKTIWE---VPERYQNLSPVGSGAYGSVCAAF---DTKTGLR--- 55
Query: 112 VAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFM 163
VAVK L++ + + + E+ L ++H N++ L+ E + LV M
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 115
Query: 164 FRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYT 223
G+ N++ + L+ + + +GL ++H+A+ +I+RD K SN+ ++ D
Sbjct: 116 --GADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDSE 169
Query: 224 AKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLT 282
K+ DFGLA+ +V+TR Y APE ++ H D++S G ++ ELLT
Sbjct: 170 LKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 283 GR 284
GR
Sbjct: 225 GR 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L+K + + + E+ L ++H N+
Sbjct: 42 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 151
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 152 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 204
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 58 NAVLYTHVIAFSLFELETITKSFRSDY-ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKV 116
+++ + + + E + + + + D+ +LG GGFG V+ + ++ ++
Sbjct: 164 DSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL 223
Query: 117 LNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRK 175
++G QG + E L ++ H + + Y E L LV M G + H++
Sbjct: 224 KKRKGYQGA---MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV 279
Query: 176 ATVPLSWATRMMIAFGA--AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA- 232
+ I + A GL LH +R +IYRD K N+LLD D ++SD GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
Query: 233 --KAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGR 284
KAG + + GT G+ APE ++ D ++ GV L E++ R
Sbjct: 338 ELKAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 58 NAVLYTHVIAFSLFELETITKSFRSDY-ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKV 116
+++ + + + E + + + + D+ +LG GGFG V+ + ++ ++
Sbjct: 164 DSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL 223
Query: 117 LNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRK 175
++G QG + E L ++ H + + Y E L LV M G + H++
Sbjct: 224 KKRKGYQGA---MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV 279
Query: 176 ATVPLSWATRMMIAFGA--AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA- 232
+ I + A GL LH +R +IYRD K N+LLD D ++SD GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
Query: 233 --KAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGR 284
KAG + + GT G+ APE ++ D ++ GV L E++ R
Sbjct: 338 ELKAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNLV 144
LGEG + TVYKG + L VA+K + E +G + EV+ L L+H N+V
Sbjct: 10 LGEGTYATVYKG------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
L + LV+E++ + L+ +L + ++ + F +GLA+ H +
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNI-INMHNVKLFLFQLLRGLAYCHR--Q 119
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM-TGH 263
V++RD K N+L++ KL+DFGLA+A +T+ + V T Y P+ ++ +
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTD 177
Query: 264 LTARSDVYSFGVVLLELLTGR 284
+ + D++ G + E+ TGR
Sbjct: 178 YSTQIDMWGVGCIFYEMATGR 198
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 58 NAVLYTHVIAFSLFELETITKSFRSDY-ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKV 116
+++ + + + E + + + + D+ +LG GGFG V+ + ++ ++
Sbjct: 164 DSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL 223
Query: 117 LNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRK 175
++G QG + E L ++ H + + Y E L LV M G + H++
Sbjct: 224 KKRKGYQGA---MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV 279
Query: 176 ATVPLSWATRMMIAFGA--AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA- 232
+ I + A GL LH +R +IYRD K N+LLD D ++SD GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
Query: 233 --KAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGR 284
KAG + + GT G+ APE ++ D ++ GV L E++ R
Sbjct: 338 ELKAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 119/242 (49%), Gaps = 29/242 (11%)
Query: 52 LEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLP 111
LE S++ Y + +++E + + +++ +G G +G+V + + + GL+
Sbjct: 5 LEMSQERPTFYRQELNKTIWE---VPERYQNLSPVGSGAYGSVCAAF---DTKTGLR--- 55
Query: 112 VAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFM 163
VAVK L++ + + + E+ L ++H N++ L+ E + LV M
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 115
Query: 164 FRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYT 223
G+ N++ + L+ + + +GL ++H+A+ +I+RD K SN+ ++ D
Sbjct: 116 --GADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 169
Query: 224 AKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLT 282
K+ DFGLA+ +V+TR Y APE ++ H D++S G ++ ELLT
Sbjct: 170 LKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 283 GR 284
GR
Sbjct: 225 GR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 119/246 (48%), Gaps = 29/246 (11%)
Query: 48 TPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGL 107
PR S++ Y + +++E + + +++ +G G +G+V + + + GL
Sbjct: 15 VPRGSHMSQERPTFYRQELNKTIWE---VPERYQNLSPVGSGAYGSVCAAF---DTKTGL 68
Query: 108 KSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLV 159
+ VAVK L++ + + + E+ L ++H N++ L+ E + LV
Sbjct: 69 R---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 160 YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLD 219
M G+ N++ + L+ + + +GL ++H+A+ +I+RD K SN+ ++
Sbjct: 126 THLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVN 179
Query: 220 SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLL 278
D K+ DFGLA+ +V+TR Y APE ++ H D++S G ++
Sbjct: 180 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 279 ELLTGR 284
ELLTGR
Sbjct: 235 ELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 119/246 (48%), Gaps = 29/246 (11%)
Query: 48 TPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGL 107
PR S++ Y + +++E + + +++ +G G +G+V + + + GL
Sbjct: 14 VPRGSHMSQERPTFYRQELNKTIWE---VPERYQNLSPVGSGAYGSVCAAF---DTKTGL 67
Query: 108 KSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLV 159
+ VAVK L++ + + + E+ L ++H N++ L+ E + LV
Sbjct: 68 R---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 160 YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLD 219
M G+ N++ + L+ + + +GL ++H+A+ +I+RD K SN+ ++
Sbjct: 125 THLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVN 178
Query: 220 SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLL 278
D K+ DFGLA+ +V+TR Y APE ++ H D++S G ++
Sbjct: 179 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 279 ELLTGR 284
ELLTGR
Sbjct: 234 ELLTGR 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 119/242 (49%), Gaps = 29/242 (11%)
Query: 52 LEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLP 111
LE S++ Y + +++E + + +++ +G G +G+V + + + GL+
Sbjct: 4 LEMSQERPTFYRQELNKTIWE---VPERYQNLSPVGSGAYGSVCAAF---DTKTGLR--- 54
Query: 112 VAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFM 163
VAVK L++ + + + E+ L ++H N++ L+ E + LV M
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 114
Query: 164 FRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYT 223
G+ N++ + L+ + + +GL ++H+A+ +I+RD K SN+ ++ D
Sbjct: 115 --GADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 168
Query: 224 AKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLT 282
K+ DFGLA+ +V+TR Y APE ++ H D++S G ++ ELLT
Sbjct: 169 LKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 283 GR 284
GR
Sbjct: 224 GR 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 24/205 (11%)
Query: 86 LGEGGFG-TVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+GEG FG + ++ + +K + ++ ++ +KE + RE V L ++HPN+V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINIS-RMSSKEREESRRE----VAVLANMKHPNIV 86
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSL-------ENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ E+ +V ++ G L + LF++ + L W ++ LA
Sbjct: 87 QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-LDWFVQIC--------LA 137
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
H +R +++RD K+ NI L D T +L DFG+A+ ++ +GT Y +PE
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPE 195
Query: 258 YVMTGHLTARSDVYSFGVVLLELLT 282
+SD+++ G VL EL T
Sbjct: 196 ICENKPYNNKSDIWALGCVLYELCT 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 35 IGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 144
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 145 YIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPE 197
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQK--LTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 122/278 (43%), Gaps = 43/278 (15%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNFLGQLRHP 141
LG+GGF ++ + V A K++ K L RE ++ E++ L H
Sbjct: 48 FLGKGGFAKCFEISDADTKEV------FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 101
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSL-ENHLFRKA-TVPLSWATRMMIAFGAAKGLAFL 199
++V G+ ++D +V E R SL E H RKA T P + I G +L
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YL 157
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA-KAGPQGDETHVSTRVMGTYGYAAPEY 258
H VI+RD K N+ L+ D K+ DFGLA K G+ V + GT Y APE
Sbjct: 158 HRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEV 212
Query: 259 VMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDP 318
+ + DV+S G ++ LL G +P E S + K L+I
Sbjct: 213 LSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL---------KETYLRI--- 253
Query: 319 RLENQYSV--RAAQKACSLAYYCLSQNPKARPLMSDVV 354
+N+YS+ A SL L +P ARP +++++
Sbjct: 254 -KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 122/278 (43%), Gaps = 43/278 (15%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNFLGQLRHP 141
LG+GGF ++ + V A K++ K L RE ++ E++ L H
Sbjct: 46 FLGKGGFAKCFEISDADTKEV------FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 99
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSL-ENHLFRKA-TVPLSWATRMMIAFGAAKGLAFL 199
++V G+ ++D +V E R SL E H RKA T P + I G +L
Sbjct: 100 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YL 155
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA-KAGPQGDETHVSTRVMGTYGYAAPEY 258
H VI+RD K N+ L+ D K+ DFGLA K G+ V + GT Y APE
Sbjct: 156 HRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEV 210
Query: 259 VMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDP 318
+ + DV+S G ++ LL G +P E S + K L+I
Sbjct: 211 LSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL---------KETYLRI--- 251
Query: 319 RLENQYSV--RAAQKACSLAYYCLSQNPKARPLMSDVV 354
+N+YS+ A SL L +P ARP +++++
Sbjct: 252 -KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH---REWLTEVNFLGQLRHPN 142
+G+G FG V ++ ++ A+K +NK+ R E+ + L HP
Sbjct: 23 IGKGSFGKVCIVQKNDTKKM------YAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHL-----FRKATVPLSWATRMMIAFGAAKGLA 197
LV L +++ +V + + G L HL F++ TV L +M L
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVM-------ALD 129
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
+L N +I+RD K NILLD ++DF +A P+ ET ++T + GT Y APE
Sbjct: 130 YLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MAGTKPYMAPE 184
Query: 258 YVMTGHLTARS---DVYSFGVVLLELLTGRK 285
+ S D +S GV ELL GR+
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 18/274 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLRHPNLV 144
+G+G FG V+KG + +V VA+K+++ +E + E+ L Q +
Sbjct: 31 IGKGSFGEVFKGIDNRTQQV------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAER 204
K G + ++ E++ GS + L AT + KGL +LH+ ++
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSEKK 141
Query: 205 PVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHL 264
I+RD K +N+LL KL+DFG+ AG D +GT + APE +
Sbjct: 142 --IHRDIKAANVLLSEQGDVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 265 TARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKL---NDKRKMLQIIDPRLE 321
+++D++S G+ +EL G P + L+ P + + + ID L
Sbjct: 198 DSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLN 257
Query: 322 NQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE 355
S R K L + + +N K ++++++
Sbjct: 258 KDPSFRPTAKEL-LKHKFIVKNSKKTSYLTELID 290
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 134/311 (43%), Gaps = 40/311 (12%)
Query: 75 TITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNF 134
TI ++ +G+G FG V++G + VAVK+ + + R W E
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRG--------KWRGEEVAVKIFSS---REERSWFREAEI 51
Query: 135 LG--QLRHPNLVKLIGYCCEDD----HRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
LRH N++ I +D+ LV ++ GSL ++L R TV + + +
Sbjct: 52 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVE--GMIKL 108
Query: 189 AFGAAKGLAFLH-----NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET- 241
A A GLA LH +P I +RD K+ NIL+ + T ++D GLA +T
Sbjct: 109 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 168
Query: 242 -HVSTRVMGTYGYAAPEY----VMTGHLTA--RSDVYSFGVVLLELLTGRKSVDKTRPSK 294
+GT Y APE + H + R+D+Y+ G+V E + R S+
Sbjct: 169 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDY 227
Query: 295 EQSLVDW--ARPKLNDKRKML--QIIDPRLENQY-SVRAAQKACSLAYYCLSQNPKARPL 349
+ D + P + + RK++ Q + P + N++ S A + + C N AR
Sbjct: 228 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 287
Query: 350 MSDVVETLEPL 360
+ +TL L
Sbjct: 288 ALRIKKTLSQL 298
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 134/311 (43%), Gaps = 40/311 (12%)
Query: 75 TITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNF 134
TI ++ +G+G FG V++G + VAVK+ + + R W E
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRG--------KWRGEEVAVKIFSS---REERSWFREAEI 49
Query: 135 LG--QLRHPNLVKLIGYCCEDD----HRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
LRH N++ I +D+ LV ++ GSL ++L R TV + + +
Sbjct: 50 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVE--GMIKL 106
Query: 189 AFGAAKGLAFLH-----NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET- 241
A A GLA LH +P I +RD K+ NIL+ + T ++D GLA +T
Sbjct: 107 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 166
Query: 242 -HVSTRVMGTYGYAAPEY----VMTGHLTA--RSDVYSFGVVLLELLTGRKSVDKTRPSK 294
+GT Y APE + H + R+D+Y+ G+V E + R S+
Sbjct: 167 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDY 225
Query: 295 EQSLVDW--ARPKLNDKRKML--QIIDPRLENQY-SVRAAQKACSLAYYCLSQNPKARPL 349
+ D + P + + RK++ Q + P + N++ S A + + C N AR
Sbjct: 226 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 285
Query: 350 MSDVVETLEPL 360
+ +TL L
Sbjct: 286 ALRIKKTLSQL 296
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 118/288 (40%), Gaps = 39/288 (13%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEV 132
E +R +LG+GGFGTV+ G+ + + ++V +K +P +VL L EV
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRN-RVLGWSPLSDSVTCPLEV 85
Query: 133 NFLGQL----RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L ++ HP +++L+ + + +LV E R LF T
Sbjct: 86 ALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYITEKGPLGEGPSR 142
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLD-SDYTAKLSDFGLAKAGPQGDETHVSTRV 247
F A H R V++RD K NIL+D AKL DFG DE + T
Sbjct: 143 CFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG--SGALLHDEPY--TDF 198
Query: 248 MGTYGYAAPEYVMTGHLTA-RSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKL 306
GT Y+ PE++ A + V+S G++L +++ G ++ + E L
Sbjct: 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL-------- 250
Query: 307 NDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
+ + C+L CL+ P +RP + +++
Sbjct: 251 ----------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL--NKEGLQGHREWLTEVNFLGQLRHPN 142
++GEG +G V K + R+ VA+K + + + + E+ L QLRH N
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRI------VAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLEN-HLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
LV L+ C + LV+EF+ L++ LF L + F G+ F H+
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHS 142
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
+I+RD K NIL+ KL DFG A+ E + + T Y APE ++
Sbjct: 143 HN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--VATRWYRAPELLVG 198
Query: 262 GHLTARS-DVYSFGVVLLELLTG 283
++ DV++ G ++ E+ G
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 134/311 (43%), Gaps = 40/311 (12%)
Query: 75 TITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNF 134
TI ++ +G+G FG V++G + VAVK+ + + R W E
Sbjct: 6 TIARTIVLQESIGKGRFGEVWRG--------KWRGEEVAVKIFSS---REERSWFREAEI 54
Query: 135 LG--QLRHPNLVKLIGYCCEDD----HRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
LRH N++ I +D+ LV ++ GSL ++L R TV + + +
Sbjct: 55 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVE--GMIKL 111
Query: 189 AFGAAKGLAFLH-----NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET- 241
A A GLA LH +P I +RD K+ NIL+ + T ++D GLA +T
Sbjct: 112 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 171
Query: 242 -HVSTRVMGTYGYAAPEY----VMTGHLTA--RSDVYSFGVVLLELLTGRKSVDKTRPSK 294
+GT Y APE + H + R+D+Y+ G+V E + R S+
Sbjct: 172 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDY 230
Query: 295 EQSLVDW--ARPKLNDKRKML--QIIDPRLENQY-SVRAAQKACSLAYYCLSQNPKARPL 349
+ D + P + + RK++ Q + P + N++ S A + + C N AR
Sbjct: 231 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 290
Query: 350 MSDVVETLEPL 360
+ +TL L
Sbjct: 291 ALRIKKTLSQL 301
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 146
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 147 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPE 199
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 35 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 144
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 145 YIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPE 197
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 134/311 (43%), Gaps = 40/311 (12%)
Query: 75 TITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNF 134
TI ++ +G+G FG V++G + VAVK+ + + R W E
Sbjct: 26 TIARTIVLQESIGKGRFGEVWRG--------KWRGEEVAVKIFSS---REERSWFREAEI 74
Query: 135 LG--QLRHPNLVKLIGYCCEDD----HRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
LRH N++ I +D+ LV ++ GSL ++L R TV + ++
Sbjct: 75 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKL-- 131
Query: 189 AFGAAKGLAFLH-----NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET- 241
A A GLA LH +P I +RD K+ NIL+ + T ++D GLA +T
Sbjct: 132 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 191
Query: 242 -HVSTRVMGTYGYAAPEY----VMTGHLTA--RSDVYSFGVVLLELLTGRKSVDKTRPSK 294
+GT Y APE + H + R+D+Y+ G+V E + R S+
Sbjct: 192 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDY 250
Query: 295 EQSLVDW--ARPKLNDKRKML--QIIDPRLENQY-SVRAAQKACSLAYYCLSQNPKARPL 349
+ D + P + + RK++ Q + P + N++ S A + + C N AR
Sbjct: 251 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 310
Query: 350 MSDVVETLEPL 360
+ +TL L
Sbjct: 311 ALRIKKTLSQL 321
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 27/262 (10%)
Query: 24 LSSSLPVKPERKHNRSISDLSDPSTPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSD 83
L+ +PVK +R ++ D+ P P D R V +F T++K+
Sbjct: 48 LTERMPVKSKRTSALAV-DIPAPPAPF---DHRIVTAKQGAVNSFY-----TVSKT---- 94
Query: 84 YILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
ILG G FG V+K E GLK +A K++ G++ E E++ + QL H NL
Sbjct: 95 EILGGGRFGQVHKC---EETATGLK---LAAKIIKTRGMKDKEEVKNEISVMNQLDHANL 148
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
++L + +LV E++ G L + + + + L+ ++ +G+ +H +
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMH--Q 205
Query: 204 RPVIYRDFKTSNIL-LDSDYTA-KLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
+++ D K NIL ++ D K+ DFGLA+ ++ V+ GT + APE V
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVNY 262
Query: 262 GHLTARSDVYSFGVVLLELLTG 283
++ +D++S GV+ LL+G
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSG 284
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 134/311 (43%), Gaps = 40/311 (12%)
Query: 75 TITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNF 134
TI ++ +G+G FG V++G + VAVK+ + + R W E
Sbjct: 39 TIARTIVLQESIGKGRFGEVWRG--------KWRGEEVAVKIFSS---REERSWFREAEI 87
Query: 135 LG--QLRHPNLVKLIGYCCEDD----HRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
LRH N++ I +D+ LV ++ GSL ++L R TV + ++
Sbjct: 88 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKL-- 144
Query: 189 AFGAAKGLAFLH-----NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET- 241
A A GLA LH +P I +RD K+ NIL+ + T ++D GLA +T
Sbjct: 145 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 204
Query: 242 -HVSTRVMGTYGYAAPEY----VMTGHLTA--RSDVYSFGVVLLELLTGRKSVDKTRPSK 294
+GT Y APE + H + R+D+Y+ G+V E + R S+
Sbjct: 205 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDY 263
Query: 295 EQSLVDW--ARPKLNDKRKML--QIIDPRLENQY-SVRAAQKACSLAYYCLSQNPKARPL 349
+ D + P + + RK++ Q + P + N++ S A + + C N AR
Sbjct: 264 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 323
Query: 350 MSDVVETLEPL 360
+ +TL L
Sbjct: 324 ALRIKKTLSQL 334
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 15/186 (8%)
Query: 106 GLKSLPVAVKVLNKEGLQGHREWLT-EVNFLGQLR-HPNLVKLIGYCCEDDHRLLVYEFM 163
+K + V + L+ E L+ RE E + L Q+ HP+++ LI LV++ M
Sbjct: 123 AVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM 182
Query: 164 FRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYT 223
+G L ++L K V LS I + ++FLH +++RD K NILLD +
Sbjct: 183 RKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQ 238
Query: 224 AKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS------DVYSFGVVL 277
+LSDFG + G++ + GT GY APE + D+++ GV+L
Sbjct: 239 IRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
Query: 278 LELLTG 283
LL G
Sbjct: 296 FTLLAG 301
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 146
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 147 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPE 199
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 146
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 147 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPE 199
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 41 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 95 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 150
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 151 YIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPE 203
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 53 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 107 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 162
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 163 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAPE 215
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 42 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 151
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 152 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 204
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 42 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 151
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 152 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 204
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 37 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 146
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 147 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 199
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 141
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 142 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 194
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 35 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 144
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 145 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 197
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 29 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 82
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 83 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 138
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 139 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 191
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 141
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 142 YIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPE 194
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVNFLGQLRHP 141
+GEG +GTV+K E + VA+K + + EG+ L E+ L +L+H
Sbjct: 10 IGEGTYGTVFKAKNRETHEI------VALKRVRLDDDDEGVPSSA--LREICLLKELKHK 61
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
N+V+L D LV+EF + L+ + F L F KGL F H+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
R V++RD K N+L++ + KL+DFGLA+A G + + T Y P+ +
Sbjct: 120 --RNVLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 262 GHLTARS-DVYSFGVVLLEL 280
L + S D++S G + EL
Sbjct: 176 AKLYSTSIDMWSAGCIFAEL 195
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 78 KSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNF 134
+ F+ ILGEG F T R S A+K+L K + + ++T E +
Sbjct: 30 EDFKFGKILGEGSFSTTVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 135 LGQLRHPNLVKLIGYCCEDDHRLLV-YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
+ +L HP VKL + +DD +L + G L ++ RK TR A
Sbjct: 84 MSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 140
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L +LH + +I+RD K NILL+ D +++DFG AK + + +GT Y
Sbjct: 141 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+PE + SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLK 141
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 142 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 194
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 27 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLK 136
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 137 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 189
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 18/230 (7%)
Query: 62 YTHVIAFSLFELETITKSFRSDY-ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE 120
+ + + E + + + + D+ +LG GGFG V+ + ++ ++ ++
Sbjct: 168 FLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK 227
Query: 121 GLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVP 179
G QG + E L ++ H + + Y E L LV M G + H++
Sbjct: 228 GYQGA---MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 180 LSWATRMMIAFGA--AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA---KA 234
+ I + A GL LH +R +IYRD K N+LLD D ++SD GLA KA
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 235 GPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGR 284
G + + GT G+ APE ++ D ++ GV L E++ R
Sbjct: 342 GQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 41 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 95 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 150
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 151 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 203
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 32 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 141
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 142 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 194
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 122/278 (43%), Gaps = 43/278 (15%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNFLGQLRHP 141
LG+GGF ++ + V A K++ K L RE ++ E++ L H
Sbjct: 22 FLGKGGFAKCFEISDADTKEV------FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 75
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSL-ENHLFRKA-TVPLSWATRMMIAFGAAKGLAFL 199
++V G+ ++D +V E R SL E H RKA T P + I G +L
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YL 131
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA-KAGPQGDETHVSTRVMGTYGYAAPEY 258
H VI+RD K N+ L+ D K+ DFGLA K G+ V + GT Y APE
Sbjct: 132 HRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEV 186
Query: 259 VMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDP 318
+ + DV+S G ++ LL G +P E S + K L+I
Sbjct: 187 LSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL---------KETYLRI--- 227
Query: 319 RLENQYSV--RAAQKACSLAYYCLSQNPKARPLMSDVV 354
+N+YS+ A SL L +P ARP +++++
Sbjct: 228 -KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 78 KSFRSDYI-LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG 136
+S+ ++I +GEG G V + + ++ VAVK ++ Q EV +
Sbjct: 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRKQQRRELLFNEVVIMR 203
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM------MIAF 190
+H N+V++ D +V EF+ G+L + + TRM +
Sbjct: 204 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCL 254
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT 250
+ L+ LH + VI+RD K+ +ILL D KLSDFG E ++GT
Sbjct: 255 AVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGT 310
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKR 310
+ APE + D++S G++++E++ G P K ++ R L +
Sbjct: 311 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRL 367
Query: 311 KMLQIIDPRLE 321
K L + P L+
Sbjct: 368 KNLHKVSPSLK 378
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNFL 135
F I+G GGFG VY R A+K L+K+ + QG L E L
Sbjct: 189 DFSVHRIIGRGGFGEVY------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 136 GQLRHPN--LVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA 192
+ + + + Y +L + + M G L HL + S A A
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEI 300
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYG 252
GL +HN R V+YRD K +NILLD ++SD GLA + H S +GT+G
Sbjct: 301 ILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 354
Query: 253 YAAPEYVMTG-HLTARSDVYSFGVVLLELLTG 283
Y APE + G + +D +S G +L +LL G
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 26 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLK 135
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 136 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 188
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNFL 135
F I+G GGFG VY R A+K L+K+ + QG L E L
Sbjct: 190 DFSVHRIIGRGGFGEVY------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 136 GQLRHPN--LVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA 192
+ + + + Y +L + + M G L HL + S A A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEI 301
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYG 252
GL +HN R V+YRD K +NILLD ++SD GLA + H S +GT+G
Sbjct: 302 ILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 355
Query: 253 YAAPEYVMTG-HLTARSDVYSFGVVLLELLTG 283
Y APE + G + +D +S G +L +LL G
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 15/259 (5%)
Query: 78 KSFRSDYI-LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG 136
+ + +++I +GEG G V I G + VAVK ++ Q EV +
Sbjct: 44 REYLANFIKIGEGSTGIVC---IATEKHTGKQ---VAVKKMDLRKQQRRELLFNEVVIMR 97
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGL 196
H N+V + D +V EF+ G+L + + AT + + L
Sbjct: 98 DYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVLRAL 154
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
++LHN + VI+RD K+ +ILL SD KLSDFG E ++GT + AP
Sbjct: 155 SYLHN--QGVIHRDIKSDSILLTSDGRIKLSDFGF--CAQVSKEVPKRKXLVGTPYWMAP 210
Query: 257 EYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLV-DWARPKLNDKRKMLQI 315
E + D++S G++++E++ G P + + D P++ D K+ +
Sbjct: 211 EVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSV 270
Query: 316 IDPRLENQYSVRAAQKACS 334
+ L+ +Q+A +
Sbjct: 271 LRGFLDLMLVREPSQRATA 289
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 27 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLK 136
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 137 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 189
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 28 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 81
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 82 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLK 137
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 138 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 190
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 16/213 (7%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQ--GHREWLTEVNFLG 136
++R +G+G F V + R L VAVK+++K L ++ EV +
Sbjct: 16 NYRLQKTIGKGNFAKV------KLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGL 196
L HPN+VKL + LV E+ G + ++L + A +A +
Sbjct: 70 ILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--V 127
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
+ H ++ +++RD K N+LLD D K++DFG + G++ G+ YAAP
Sbjct: 128 QYCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAP 182
Query: 257 EYVMTGHLTA-RSDVYSFGVVLLELLTGRKSVD 288
E DV+S GV+L L++G D
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLP---VAVKVLNKEGLQGHREW 128
+ + + K + +G GGF V++ L VA+K+++K L
Sbjct: 4 DYDELLKYYELHETIGTGGFA---------KVKLACHILTGEMVAIKIMDKNTLGSDLPR 54
Query: 129 L-TEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMM 187
+ TE+ L LRH ++ +L + +V E+ G L +++ + LS +
Sbjct: 55 IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRV 112
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
+ +A++H+ + +RD K N+L D + KL DFGL A P+G++ +
Sbjct: 113 VFRQIVSAVAYVHS--QGYAHRDLKPENLLFDEYHKLKLIDFGLC-AKPKGNKDYHLQTC 169
Query: 248 MGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTG 283
G+ YAAPE + +L + +DV+S G++L L+ G
Sbjct: 170 CGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 36 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 145
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 146 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 198
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNFL 135
F I+G GGFG VY R A+K L+K+ + QG L E L
Sbjct: 190 DFSVHRIIGRGGFGEVY------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 136 GQLRHPN--LVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA 192
+ + + + Y +L + + M G L HL + S A A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEI 301
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYG 252
GL +HN R V+YRD K +NILLD ++SD GLA + H S +GT+G
Sbjct: 302 ILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 355
Query: 253 YAAPEYVMTG-HLTARSDVYSFGVVLLELLTG 283
Y APE + G + +D +S G +L +LL G
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNFL 135
F I+G GGFG VY R A+K L+K+ + QG L E L
Sbjct: 190 DFSVHRIIGRGGFGEVY------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 136 GQLRHPN--LVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA 192
+ + + + Y +L + + M G L HL + S A A
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEI 301
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYG 252
GL +HN R V+YRD K +NILLD ++SD GLA + H S +GT+G
Sbjct: 302 ILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHG 355
Query: 253 YAAPEYVMTG-HLTARSDVYSFGVVLLELLTG 283
Y APE + G + +D +S G +L +LL G
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 40/300 (13%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG--QLRHPNL 143
+G+G FG V++G + VAVK+ + + R W E LRH N+
Sbjct: 11 IGKGRFGEVWRG--------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENI 59
Query: 144 VKLIGYCCEDD----HRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
+ I +D+ LV ++ GSL ++L R TV + + +A A GLA L
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVE--GMIKLALSTASGLAHL 116
Query: 200 H-----NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET--HVSTRVMGTY 251
H +P I +RD K+ NIL+ + T ++D GLA +T +GT
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176
Query: 252 GYAAPEY----VMTGHLTA--RSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDW--AR 303
Y APE + H + R+D+Y+ G+V E + R S+ + D +
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQLPYYDLVPSD 235
Query: 304 PKLNDKRKML--QIIDPRLENQY-SVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
P + + RK++ Q + P + N++ S A + + C N AR + +TL L
Sbjct: 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 78 KSFRSDYI-LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG 136
+S+ ++I +GEG G V + + ++ VAVK ++ Q EV +
Sbjct: 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRKQQRRELLFNEVVIMR 126
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM------MIAF 190
+H N+V++ D +V EF+ G+L + + TRM +
Sbjct: 127 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCL 177
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT 250
+ L+ LH + VI+RD K+ +ILL D KLSDFG E ++GT
Sbjct: 178 AVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGT 233
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKR 310
+ APE + D++S G++++E++ G P K ++ R L +
Sbjct: 234 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRL 290
Query: 311 KMLQIIDPRLE 321
K L + P L+
Sbjct: 291 KNLHKVSPSLK 301
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 78 KSFRSDYI-LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG 136
+S+ ++I +GEG G V + + ++ VAVK ++ Q EV +
Sbjct: 28 RSYLDNFIKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRKQQRRELLFNEVVIMR 81
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM------MIAF 190
+H N+V++ D +V EF+ G+L + + TRM +
Sbjct: 82 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCL 132
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT 250
+ L+ LH + VI+RD K+ +ILL D KLSDFG E ++GT
Sbjct: 133 AVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGT 188
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKR 310
+ APE + D++S G++++E++ G P K ++ R L +
Sbjct: 189 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRL 245
Query: 311 KMLQIIDPRLE 321
K L + P L+
Sbjct: 246 KNLHKVSPSLK 256
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 120/277 (43%), Gaps = 41/277 (14%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNFLGQLRHP 141
LG+GGF ++ + V A K++ K L RE ++ E++ L H
Sbjct: 28 FLGKGGFAKCFEISDADTKEV------FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 81
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSL-ENHLFRKA-TVPLSWATRMMIAFGAAKGLAFL 199
++V G+ ++D +V E R SL E H RKA T P + I G +L
Sbjct: 82 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YL 137
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H VI+RD K N+ L+ D K+ DFGLA E + + GT Y APE +
Sbjct: 138 HRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVL 193
Query: 260 MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPR 319
+ DV+S G ++ LL G +P E S + K L+I
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL---------KETYLRI---- 233
Query: 320 LENQYSV--RAAQKACSLAYYCLSQNPKARPLMSDVV 354
+N+YS+ A SL L +P ARP +++++
Sbjct: 234 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 78 KSFRSDYI-LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG 136
+S+ ++I +GEG G V + + ++ VAVK ++ Q EV +
Sbjct: 30 RSYLDNFIKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRKQQRRELLFNEVVIMR 83
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM------MIAF 190
+H N+V++ D +V EF+ G+L + + TRM +
Sbjct: 84 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCL 134
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT 250
+ L+ LH + VI+RD K+ +ILL D KLSDFG E ++GT
Sbjct: 135 AVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGT 190
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKR 310
+ APE + D++S G++++E++ G P K ++ R L +
Sbjct: 191 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRL 247
Query: 311 KMLQIIDPRLE 321
K L + P L+
Sbjct: 248 KNLHKVSPSLK 258
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQK--LTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGL + +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 67/299 (22%)
Query: 78 KSFRSDYI----LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE--GLQGHREW--- 128
K+ R +YI LG G G V + + + VA+K+++K + RE
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCK------KVAIKIISKRKFAIGSAREADPA 58
Query: 129 ---LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-----ENHLFRKATVPL 180
TE+ L +L HP ++K+ + +D+ +V E M G L N ++AT L
Sbjct: 59 LNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL 117
Query: 181 SWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQ 237
+ +M++A + +LH E +I+RD K N+LL S D K++DFG +K
Sbjct: 118 -YFYQMLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--- 165
Query: 238 GDETHVSTRVMGTYGYAAPEYVM---TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSK 294
ET + + GT Y APE ++ T D +S GV+L L+G
Sbjct: 166 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG----------- 214
Query: 295 EQSLVDWARPKLNDKRKMLQIIDPRLENQYS------VRAAQKACSLAYYCLSQNPKAR 347
P ++ R + + D +Y+ ++KA L L +PKAR
Sbjct: 215 --------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 265
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 67/299 (22%)
Query: 78 KSFRSDYI----LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE--GLQGHREW--- 128
K+ R +YI LG G G V + + + VA+K+++K + RE
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAFERKTCK------KVAIKIISKRKFAIGSAREADPA 65
Query: 129 ---LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-----ENHLFRKATVPL 180
TE+ L +L HP ++K+ + +D+ +V E M G L N ++AT L
Sbjct: 66 LNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL 124
Query: 181 SWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQ 237
+ +M++A + +LH E +I+RD K N+LL S D K++DFG +K
Sbjct: 125 -YFYQMLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--- 172
Query: 238 GDETHVSTRVMGTYGYAAPEYVM---TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSK 294
ET + + GT Y APE ++ T D +S GV+L L+G
Sbjct: 173 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG----------- 221
Query: 295 EQSLVDWARPKLNDKRKMLQIIDPRLENQYS------VRAAQKACSLAYYCLSQNPKAR 347
P ++ R + + D +Y+ ++KA L L +PKAR
Sbjct: 222 --------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 272
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 85 ILGEGGFGTVY-----KGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
+LG G +G V+ G+ D +K L A V + + R TE L +R
Sbjct: 61 VLGTGAYGKVFLVRKISGH-DTGKLYAMKVLKKATIVQKAKTTEHTR---TERQVLEHIR 116
Query: 140 HPNLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAF 198
+ + Y + + +L L+ +++ G L HL ++ + + + LA
Sbjct: 117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLAL 172
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
H + +IYRD K NILLDS+ L+DFGL+K DET + GT Y AP+
Sbjct: 173 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-ADETERAYDFCGTIEYMAPDI 231
Query: 259 VM---TGHLTARSDVYSFGVVLLELLTG 283
V +GH A D +S GV++ ELLTG
Sbjct: 232 VRGGDSGHDKA-VDWWSLGVLMYELLTG 258
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 78 KSFRSDYI-LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG 136
+S+ ++I +GEG G V + + ++ VAVK ++ Q EV +
Sbjct: 23 RSYLDNFIKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRKQQRRELLFNEVVIMR 76
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM------MIAF 190
+H N+V++ D +V EF+ G+L + + TRM +
Sbjct: 77 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCL 127
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT 250
+ L+ LH + VI+RD K+ +ILL D KLSDFG E ++GT
Sbjct: 128 AVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ--VSKEVPRRKXLVGT 183
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKR 310
+ APE + D++S G++++E++ G P K ++ R L +
Sbjct: 184 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRL 240
Query: 311 KMLQIIDPRLE 321
K L + P L+
Sbjct: 241 KNLHKVSPSLK 251
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 67/299 (22%)
Query: 78 KSFRSDYI----LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE--GLQGHREW--- 128
K+ R +YI LG G G V + + + VA+K+++K + RE
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCK------KVAIKIISKRKFAIGSAREADPA 59
Query: 129 ---LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-----ENHLFRKATVPL 180
TE+ L +L HP ++K+ + +D+ +V E M G L N ++AT L
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 181 SWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQ 237
+ +M++A + +LH E +I+RD K N+LL S D K++DFG +K
Sbjct: 119 -YFYQMLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--- 166
Query: 238 GDETHVSTRVMGTYGYAAPEYVM---TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSK 294
ET + + GT Y APE ++ T D +S GV+L L+G
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG----------- 215
Query: 295 EQSLVDWARPKLNDKRKMLQIIDPRLENQYS------VRAAQKACSLAYYCLSQNPKAR 347
P ++ R + + D +Y+ ++KA L L +PKAR
Sbjct: 216 --------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 67/299 (22%)
Query: 78 KSFRSDYI----LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE--GLQGHREW--- 128
K+ R +YI LG G G V + + + VA+K+++K + RE
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCK------KVAIKIISKRKFAIGSAREADPA 59
Query: 129 ---LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-----ENHLFRKATVPL 180
TE+ L +L HP ++K+ + +D+ +V E M G L N ++AT L
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 181 SWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQ 237
+ +M++A + +LH E +I+RD K N+LL S D K++DFG +K
Sbjct: 119 -YFYQMLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--- 166
Query: 238 GDETHVSTRVMGTYGYAAPEYVM---TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSK 294
ET + + GT Y APE ++ T D +S GV+L L+G
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG----------- 215
Query: 295 EQSLVDWARPKLNDKRKMLQIIDPRLENQYS------VRAAQKACSLAYYCLSQNPKAR 347
P ++ R + + D +Y+ ++KA L L +PKAR
Sbjct: 216 --------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 78 KSFRSDYI-LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG 136
+S+ ++I +GEG G V + + ++ VAVK ++ Q EV +
Sbjct: 19 RSYLDNFIKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRKQQRRELLFNEVVIMR 72
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM------MIAF 190
+H N+V++ D +V EF+ G+L + + TRM +
Sbjct: 73 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCL 123
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT 250
+ L+ LH + VI+RD K+ +ILL D KLSDFG E ++GT
Sbjct: 124 AVLQALSVLH--AQGVIHRDIKSDSILLTHDGRVKLSDFGF--CAQVSKEVPRRKXLVGT 179
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKR 310
+ APE + D++S G++++E++ G P K ++ R L +
Sbjct: 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRL 236
Query: 311 KMLQIIDPRLE 321
K L + P L+
Sbjct: 237 KNLHKVSPSLK 247
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL-----NKEGLQGHREWLTEVNFLGQLRH 140
LG+G FG VY R VA+KVL KEG++ + E+ L H
Sbjct: 31 LGKGKFGNVYLA------REKKSHFIVALKVLFKSQIEKEGVE--HQLRREIEIQAHLHH 82
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
PN+++L Y + L+ E+ RG L L + T +M A L + H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEEL--ADALMYCH 140
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM-GTYGYAAPEYV 259
+ VI+RD K N+LL K++DFG + P + + M GT Y PE +
Sbjct: 141 G--KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS-----LRRKTMCGTLDYLPPEMI 193
Query: 260 MTGHLTARSDVYSFGVVLLELLTG 283
+ D++ GV+ ELL G
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 67/299 (22%)
Query: 78 KSFRSDYI----LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE--GLQGHREW--- 128
K+ R +YI LG G G V + + + VA+K+++K + RE
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCK------KVAIKIISKRKFAIGSAREADPA 59
Query: 129 ---LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-----ENHLFRKATVPL 180
TE+ L +L HP ++K+ + +D+ +V E M G L N ++AT L
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 181 SWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQ 237
+ +M++A + +LH E +I+RD K N+LL S D K++DFG +K
Sbjct: 119 -YFYQMLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--- 166
Query: 238 GDETHVSTRVMGTYGYAAPEYVM---TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSK 294
ET + + GT Y APE ++ T D +S GV+L L+G
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG----------- 215
Query: 295 EQSLVDWARPKLNDKRKMLQIIDPRLENQYS------VRAAQKACSLAYYCLSQNPKAR 347
P ++ R + + D +Y+ ++KA L L +PKAR
Sbjct: 216 --------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 120/277 (43%), Gaps = 41/277 (14%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNFLGQLRHP 141
LG+GGF ++ + V A K++ K L RE ++ E++ L H
Sbjct: 24 FLGKGGFAKCFEISDADTKEV------FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 77
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSL-ENHLFRKA-TVPLSWATRMMIAFGAAKGLAFL 199
++V G+ ++D +V E R SL E H RKA T P + I G +L
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YL 133
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H VI+RD K N+ L+ D K+ DFGLA E + + GT Y APE +
Sbjct: 134 HRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVL 189
Query: 260 MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPR 319
+ DV+S G ++ LL G +P E S + K L+I
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL---------KETYLRI---- 229
Query: 320 LENQYSV--RAAQKACSLAYYCLSQNPKARPLMSDVV 354
+N+YS+ A SL L +P ARP +++++
Sbjct: 230 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 120/277 (43%), Gaps = 41/277 (14%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--QGHREWLT-EVNFLGQLRHP 141
LG+GGF ++ + V A K++ K L RE ++ E++ L H
Sbjct: 24 FLGKGGFAKCFEISDADTKEV------FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ 77
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSL-ENHLFRKA-TVPLSWATRMMIAFGAAKGLAFL 199
++V G+ ++D +V E R SL E H RKA T P + I G +L
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YL 133
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
H VI+RD K N+ L+ D K+ DFGLA E + + GT Y APE +
Sbjct: 134 HRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVL 189
Query: 260 MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPR 319
+ DV+S G ++ LL G +P E S + K L+I
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETSCL---------KETYLRI---- 229
Query: 320 LENQYSV--RAAQKACSLAYYCLSQNPKARPLMSDVV 354
+N+YS+ A SL L +P ARP +++++
Sbjct: 230 KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 120/287 (41%), Gaps = 42/287 (14%)
Query: 86 LGEGGFGTVYKGYIDEN--VRVGLKSLPVAVKVLNKEG--LQGHREWLTEVNFLGQLRHP 141
+GEG +G V+K +N V LK + V +EG L RE + + L HP
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQT---GEEGMPLSTIRE-VAVLRHLETFEHP 74
Query: 142 NLVKLIGYCC-----EDDHRLLVYEFMFRGSLENHLFR--KATVPLSWATRMMIAFGAAK 194
N+V+L C + LV+E + + L +L + + VP MM F +
Sbjct: 75 NVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM--FQLLR 131
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYA 254
GL FLH+ V++RD K NIL+ S KL+DFGLA+ T V+ T Y
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYR 186
Query: 255 APEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKT--------RPSKEQSLVD 300
APE ++ D++S G + E L G VD+ P +E D
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 301 WARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKAR 347
A P+ K Q I+ ++ + L CL+ NP R
Sbjct: 247 VALPRQAFHSKSAQPIE-----KFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ DE T + T Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEM---TGXVATRWYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 34/228 (14%)
Query: 79 SFRSDYILGEGGFGTVY--KGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG 136
F LG GGFG V+ K +D + +K + + + L +E + + EV L
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVD-DCNYAIKRIRLPNRELAREKV------MREVKALA 58
Query: 137 QLRHPNLVKLIGYCCEDD------------HRLLVYEFMFRGSLENHLFRKATVP-LSWA 183
+L HP +V+ E + + + + + +L++ + + T+ +
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 184 TRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHV 243
+ I A+ + FLH+ + +++RD K SNI D K+ DFGL A Q +E
Sbjct: 119 VCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 244 ----------STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELL 281
T +GT Y +PE + + + D++S G++L ELL
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + G + VAVK L++ + + + E+ L ++H N+
Sbjct: 26 VGSGAYGSVCAAF---DTKTGHR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + A L+ + + +GL
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAK--LTDDHVQFLIYQILRGLK 135
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 136 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 188
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPNL 143
+G+G F V + R L VAVK+++K L ++ EV + L HPN+
Sbjct: 22 IGKGNFAKV------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL + LV E+ G + ++L + A +A + + H +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--VQYCH--Q 131
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
+ +++RD K N+LLD+D K++DFG + G++ G+ YAAPE
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKK 188
Query: 264 LTA-RSDVYSFGVVLLELLTGRKSVD 288
DV+S GV+L L++G D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+GEG +G VYK + LK + L KE + E++ L +L+H N+VK
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIR-----LEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L +LV+E + + L L T G+A+ H+ R
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD--RR 120
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM-TGHL 264
V++RD K N+L++ + K++DFGLA+A G T + T Y AP+ +M +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 265 TARSDVYSFGVVLLELLTG 283
+ D++S G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ D+GLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPNL 143
+G+G F V + R L VAVK+++K L ++ EV + L HPN+
Sbjct: 22 IGKGNFAKV------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL + LV E+ G + ++L + A +A + + H +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--VQYCH--Q 131
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
+ +++RD K N+LLD+D K++DFG + G++ G+ YAAPE
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKK 188
Query: 264 LTA-RSDVYSFGVVLLELLTGRKSVD 288
DV+S GV+L L++G D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWL-T 130
+ E I K F LG G F V +E L AVK + K+ L+G +
Sbjct: 16 QAEDIKKIFEFKETLGTGAFSEVVLA--EEKATGKL----FAVKCIPKKALKGKESSIEN 69
Query: 131 EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAF 190
E+ L +++H N+V L +H LV + + G L + + K A+ ++
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQV 129
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILL---DSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
A + +LH +++RD K N+L D + +SDFGL+K +GD V +
Sbjct: 130 LDA--VYYLHRM--GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTA 182
Query: 248 MGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
GT GY APE + + D +S GV+ LL G
Sbjct: 183 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 118/246 (47%), Gaps = 29/246 (11%)
Query: 48 TPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGL 107
PR S++ Y + +++E + + +++ +G G +G+V + + + G
Sbjct: 14 VPRGSHMSQERPTFYRQELNKTIWE---VPERYQNLSPVGSGAYGSVCAAF---DTKTGH 67
Query: 108 KSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLV 159
+ VAVK L++ + + + E+ L ++H N++ L+ E + LV
Sbjct: 68 R---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 124
Query: 160 YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLD 219
M G+ N++ + L+ + + +GL ++H+A+ +I+RD K SN+ ++
Sbjct: 125 THLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVN 178
Query: 220 SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLL 278
D K+ DFGLA+ +V+TR Y APE ++ H D++S G ++
Sbjct: 179 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 279 ELLTGR 284
ELLTGR
Sbjct: 234 ELLTGR 239
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+GEG +G VYK + LK + L KE + E++ L +L+H N+VK
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIR-----LEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L +LV+E + + L L T G+A+ H+ R
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD--RR 120
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM-TGHL 264
V++RD K N+L++ + K++DFGLA+A G T + T Y AP+ +M +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 265 TARSDVYSFGVVLLELLTG 283
+ D++S G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+GEG +G VYK + LK + L KE + E++ L +L+H N+VK
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIR-----LEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L +LV+E + + L L T G+A+ H+ R
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD--RR 120
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM-TGHL 264
V++RD K N+L++ + K++DFGLA+A G T + T Y AP+ +M +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 265 TARSDVYSFGVVLLELLTG 283
+ D++S G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 120/287 (41%), Gaps = 42/287 (14%)
Query: 86 LGEGGFGTVYKGYIDEN--VRVGLKSLPVAVKVLNKEG--LQGHREWLTEVNFLGQLRHP 141
+GEG +G V+K +N V LK + V +EG L RE + + L HP
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQT---GEEGMPLSTIRE-VAVLRHLETFEHP 74
Query: 142 NLVKLIGYCC-----EDDHRLLVYEFMFRGSLENHLFR--KATVPLSWATRMMIAFGAAK 194
N+V+L C + LV+E + + L +L + + VP MM F +
Sbjct: 75 NVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM--FQLLR 131
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYA 254
GL FLH+ V++RD K NIL+ S KL+DFGLA+ T V+ T Y
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYR 186
Query: 255 APEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKT--------RPSKEQSLVD 300
APE ++ D++S G + E L G VD+ P +E D
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 301 WARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKAR 347
A P+ K Q I+ ++ + L CL+ NP R
Sbjct: 247 VALPRQAFHSKSAQPIE-----KFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 118/246 (47%), Gaps = 29/246 (11%)
Query: 48 TPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGL 107
PR S++ Y + +++E + + +++ +G G +G+V + + + G
Sbjct: 15 VPRGSHMSQERPTFYRQELNKTIWE---VPERYQNLSPVGSGAYGSVCAAF---DTKTGH 68
Query: 108 KSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLV 159
+ VAVK L++ + + + E+ L ++H N++ L+ E + LV
Sbjct: 69 R---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 160 YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLD 219
M G+ N++ + L+ + + +GL ++H+A+ +I+RD K SN+ ++
Sbjct: 126 THLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVN 179
Query: 220 SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLL 278
D K+ DFGLA+ +V+TR Y APE ++ H D++S G ++
Sbjct: 180 EDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 279 ELLTGR 284
ELLTGR
Sbjct: 235 ELLTGR 240
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 120/287 (41%), Gaps = 42/287 (14%)
Query: 86 LGEGGFGTVYKGYIDEN--VRVGLKSLPVAVKVLNKEG--LQGHREWLTEVNFLGQLRHP 141
+GEG +G V+K +N V LK + V +EG L RE + + L HP
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQT---GEEGMPLSTIRE-VAVLRHLETFEHP 74
Query: 142 NLVKLIGYCC-----EDDHRLLVYEFMFRGSLENHLFR--KATVPLSWATRMMIAFGAAK 194
N+V+L C + LV+E + + L +L + + VP MM F +
Sbjct: 75 NVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM--FQLLR 131
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYA 254
GL FLH+ V++RD K NIL+ S KL+DFGLA+ T V+ T Y
Sbjct: 132 GLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYR 186
Query: 255 APEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKT--------RPSKEQSLVD 300
APE ++ D++S G + E L G VD+ P +E D
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 301 WARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKAR 347
A P+ K Q I+ ++ + L CL+ NP R
Sbjct: 247 VALPRQAFHSKSAQPIE-----KFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 117 LNKEGLQGHRE-WLTEVNFLGQLR-HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR 174
+ E +Q RE L EV+ L ++ HPN+++L + LV++ M +G L ++L
Sbjct: 45 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE 104
Query: 175 KATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA 234
K T+ ++M A + + LH +++RD K NILLD D KL+DFG +
Sbjct: 105 KVTLSEKETRKIMRAL--LEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQ 160
Query: 235 GPQGDETHVSTRVMGTYGYAAPEYVMTGH------LTARSDVYSFGVVLLELLTG 283
G++ V GT Y APE + D++S GV++ LL G
Sbjct: 161 LDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 75 TITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWL-TEVN 133
TI F LG G FG V+ + E GL+ + +K +NK+ Q E + E+
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVH---LVEERSSGLERV---IKTINKDRSQVPMEQIEAEIE 72
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLF----RKATVPLSWATRMMI 188
L L HPN++K+ ED H + +V E G L + R + + +M
Sbjct: 73 VLKSLDHPNIIKIFE-VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMK 131
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVST 245
A LA+ H+ + V+++D K NIL K+ DFGLA+ + DE ST
Sbjct: 132 QMMNA--LAYFHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF-KSDEH--ST 184
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
GT Y APE V +T + D++S GVV+ LLTG
Sbjct: 185 NAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQ--GHREWLTEVNFLGQLRHPNL 143
LG G +G V R + + A+K++ K + + + L EV L L HPN+
Sbjct: 45 LGSGAYGEVLL------CRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
+KL + + + LV E G L + + + + + +I G+ +LH +
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLH--K 154
Query: 204 RPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++RD K N+LL+S D K+ DFGL+ ++ + R +GT Y APE V+
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--NQKKMKER-LGTAYYIAPE-VL 210
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
+ DV+S GV+L LL G
Sbjct: 211 RKKYDEKCDVWSIGVILFILLAG 233
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 85 ILGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
+LG+G +G VY G + VR+ +K +P + + + E+ L+H N+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIP-------ERDSRYSQPLHEEIALHKHLKHKNI 81
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK---GLAFLH 200
V+ +G E+ + E + GSL + L R PL I F + GL +LH
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLK-DNEQTIGFYTKQILEGLKYLH 139
Query: 201 NAERPVIYRDFKTSNILLDSDYTA--KLSDFGLAK--AGPQGDETHVSTRVMGTYGYAAP 256
+ + +++RD K N+L+++ Y+ K+SDFG +K AG + GT Y AP
Sbjct: 140 DNQ--IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGI----NPCTETFTGTLQYMAP 192
Query: 257 EYVMTG--HLTARSDVYSFGVVLLELLTGR 284
E + G +D++S G ++E+ TG+
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 118 NKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKAT 177
NK + H E E++ L L HPN++KL + + LV EF G L + +
Sbjct: 83 NKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK 142
Query: 178 VPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYT---AKLSDFGLAKA 234
A +M + G+ +LH + +++RD K NILL++ + K+ DFGL+
Sbjct: 143 FDECDAANIMKQILS--GICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198
Query: 235 GPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ + + R +GT Y APE V+ + DV+S GV++ LL G
Sbjct: 199 FSK--DYKLRDR-LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPNL 143
+G+G F V + R L VAVK+++K L ++ EV + L HPN+
Sbjct: 22 IGKGNFAKV------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL + LV E+ G + ++L + A +A + + H +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--VQYCH--Q 131
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
+ +++RD K N+LLD+D K++DFG + G++ G YAAPE
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKK 188
Query: 264 LTA-RSDVYSFGVVLLELLTGRKSVD 288
DV+S GV+L L++G D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 117 LNKEGLQGHRE-WLTEVNFLGQLR-HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR 174
+ E +Q RE L EV+ L ++ HPN+++L + LV++ M +G L ++L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE 117
Query: 175 KATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA 234
K T+ ++M A + + LH +++RD K NILLD D KL+DFG +
Sbjct: 118 KVTLSEKETRKIMRAL--LEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173
Query: 235 GPQGDETHVSTRVMGTYGYAAPEYVMTGH------LTARSDVYSFGVVLLELLTG 283
G++ V GT Y APE + D++S GV++ LL G
Sbjct: 174 LDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 19/200 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL----NKEGLQGHREWLTEVNFLGQLRHP 141
+GEG +GTV+K E + VA+K + + EG+ L E+ L +L+H
Sbjct: 10 IGEGTYGTVFKAKNRETHEI------VALKRVRLDDDDEGVPSSA--LREICLLKELKHK 61
Query: 142 NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
N+V+L D LV+EF + L+ + F L F KGL F H+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 202 AERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
R V++RD K N+L++ + KL++FGLA+A G + + T Y P+ +
Sbjct: 120 --RNVLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 262 GHLTARS-DVYSFGVVLLEL 280
L + S D++S G + EL
Sbjct: 176 AKLYSTSIDMWSAGCIFAEL 195
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 123/305 (40%), Gaps = 61/305 (20%)
Query: 75 TITKSFRSDY----ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT 130
T+ K F D+ ++G GGFG V+K R+ K+ + N E +
Sbjct: 4 TVDKRFGMDFKEIELIGSGGFGQVFKA----KHRIDGKTYVIKRVKYNNEKAE------R 53
Query: 131 EVNFLGQLRHPNLVKLIGYCCED--DHR----------------LLVYEFMFRGSLENHL 172
EV L +L H N+V G C D D+ + EF +G+LE +
Sbjct: 54 EVKALAKLDHVNIVHYNG--CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI 111
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLA 232
++ L + + KG+ ++H+ + +I RD K SNI L K+ DFGL
Sbjct: 112 EKRRGEKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLV 169
Query: 233 KAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRP 292
+ + R GT Y +PE + + D+Y+ G++L ELL V T
Sbjct: 170 TSLKNDGK---RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL----HVCDTAF 222
Query: 293 SKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSD 352
+ D ++D I D +K +L LS+ P+ RP S+
Sbjct: 223 ETSKFFTDLRDGIISD------IFD------------KKEKTLLQKLLSKKPEDRPNTSE 264
Query: 353 VVETL 357
++ TL
Sbjct: 265 ILRTL 269
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPNL 143
+G+G F V + R L VAV++++K L ++ EV + L HPN+
Sbjct: 22 IGKGNFAKV------KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL + LV E+ G + ++L + A +A + + H +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--VQYCH--Q 131
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
+ +++RD K N+LLD+D K++DFG + G++ G+ YAAPE
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKK 188
Query: 264 LTA-RSDVYSFGVVLLELLTGRKSVD 288
DV+S GV+L L++G D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPNL 143
+G+G F V + R L VAV++++K L ++ EV + L HPN+
Sbjct: 22 IGKGNFAKV------KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL + LV E+ G + ++L + A +A + + H +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA--VQYCH--Q 131
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
+ +++RD K N+LLD+D K++DFG + G++ G+ YAAPE
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPELFQGKK 188
Query: 264 LTA-RSDVYSFGVVLLELLTGRKSVD 288
DV+S GV+L L++G D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 117 LNKEGLQGHRE-WLTEVNFLGQLR-HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR 174
+ E +Q RE L EV+ L ++ HPN+++L + LV++ M +G L ++L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE 117
Query: 175 KATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA 234
K T+ ++M A + + LH +++RD K NILLD D KL+DFG +
Sbjct: 118 KVTLSEKETRKIMRAL--LEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQ 173
Query: 235 GPQGDETHVSTRVMGTYGYAAPEYVMTGH------LTARSDVYSFGVVLLELLTG 283
G++ V GT Y APE + D++S GV++ LL G
Sbjct: 174 LDPGEKLR---SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 117/246 (47%), Gaps = 29/246 (11%)
Query: 48 TPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGL 107
PR S++ Y + +++E + + +++ +G G +G+V + + + G
Sbjct: 15 VPRGSHMSQERPTFYRQELNKTIWE---VPERYQNLSPVGSGAYGSVCAAF---DTKTGH 68
Query: 108 KSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLV 159
+ VAVK L++ + + + E+ L ++H N++ L+ E + LV
Sbjct: 69 R---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 125
Query: 160 YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLD 219
M G+ N++ + L+ + + +GL ++H+A+ +I+RD K SN+ ++
Sbjct: 126 THLM--GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVN 179
Query: 220 SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLL 278
D K+ DFGLA+ V+TR Y APE ++ H D++S G ++
Sbjct: 180 EDCELKILDFGLARHTDDEMXGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 279 ELLTGR 284
ELLTGR
Sbjct: 235 ELLTGR 240
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPNL 143
+G+G F V + R L VAVK+++K L ++ EV + L HPN+
Sbjct: 15 IGKGNFAKV------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL + LV E+ G + ++L + A +A + + H +
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSA--VQYCH--Q 124
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
+ +++RD K N+LLD+D K++DFG + G++ G+ YAAPE
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKK 181
Query: 264 LTA-RSDVYSFGVVLLELLTGRKSVD 288
DV+S GV+L L++G D
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 76 ITKSFRSDYILGEGGFGTVYKGYID----ENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
+ K++ S +G G +G+V ID E V + S P ++ K + +RE L
Sbjct: 40 LPKTYVSPTHVGSGAYGSVCSA-IDKRSGEKVAIKKLSRPFQSEIFAK---RAYRELL-- 93
Query: 132 VNFLGQLRHPNLVKLIGYCCEDDHRLLVYEF-MFRGSLENHLFRKATVPLSWATRMMIAF 190
L ++H N++ L+ Y+F + ++ L + + S + +
Sbjct: 94 --LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVY 151
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT 250
KGL ++H+A V++RD K N+ ++ D K+ DFGLA+ +V TR
Sbjct: 152 QMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR---- 205
Query: 251 YGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTGR 284
Y APE +++ H D++S G ++ E+LTG+
Sbjct: 206 -WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 110/273 (40%), Gaps = 48/273 (17%)
Query: 43 LSDPSTPRNLE---DSRKNAVLYTHVIAFS--------LFELETITKSFR------SDY- 84
+ DP +P N+E D + VL A L E I K R DY
Sbjct: 19 IRDPRSPINVESLLDGLNSLVLDLDFPALRKNKNIDNFLNRYEKIVKKIRGLQMKAEDYD 78
Query: 85 ---ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQL 138
++G G FG V + VR A+K+L+K + + + E + +
Sbjct: 79 VVKVIGRGAFGEV------QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 132
Query: 139 RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWA----TRMMIAFGAAK 194
P +V+L +D + +V E+M G L N L VP WA +++A A
Sbjct: 133 NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYA 254
+ +H RD K N+LLD KL+DFG + H T V GT Y
Sbjct: 192 SMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYI 242
Query: 255 APEYVMT----GHLTARSDVYSFGVVLLELLTG 283
+PE + + G+ D +S GV L E+L G
Sbjct: 243 SPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 76 ITKSFRSDYILGEGGFGTVYKGYID----ENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
+ K++ S +G G +G+V ID E V + S P ++ K + +RE L
Sbjct: 22 LPKTYVSPTHVGSGAYGSVCSA-IDKRSGEKVAIKKLSRPFQSEIFAK---RAYRELL-- 75
Query: 132 VNFLGQLRHPNLVKLIGYCCEDDHRLLVYEF-MFRGSLENHLFRKATVPLSWATRMMIAF 190
L ++H N++ L+ Y+F + ++ L + + S + +
Sbjct: 76 --LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVY 133
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGT 250
KGL ++H+A V++RD K N+ ++ D K+ DFGLA+ +V TR
Sbjct: 134 QMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR---- 187
Query: 251 YGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTGR 284
Y APE +++ H D++S G ++ E+LTG+
Sbjct: 188 -WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + G + VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGHR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 45/301 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEFK---NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 E 355
+
Sbjct: 271 Q 271
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V + R G L AVK+L K+ + + + E L P
Sbjct: 348 VLGKGSFGKVML-----SERKGTDEL-YAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
+ + C + RL V E++ G L H+ + A + A A GL FL
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA--VFYAAEIAIGLFFLQ 459
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ + +IYRD K N++LDS+ K++DFG+ K T + GT Y APE +
Sbjct: 460 S--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIA 515
Query: 261 TGHLTARSDVYSFGVVLLELLTGR 284
D ++FGV+L E+L G+
Sbjct: 516 YQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + G + VAVK L++ + + + E+ L ++H N+
Sbjct: 40 VGSGAYGSVCAAF---DTKTGHR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 93
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 94 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 149
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 150 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 202
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 122/280 (43%), Gaps = 47/280 (16%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL-RHPNL 143
++G G +G VYKG +V+ G + A+KV++ G + E E+N L + H N+
Sbjct: 31 LVGNGTYGQVYKG---RHVKTGQLA---AIKVMDVTGDE-EEEIKQEINMLKKYSHHRNI 83
Query: 144 VKLIGYCCE------DDHRLLVYEFMFRGSLENHL--FRKATVPLSWATRMMIAFGAAKG 195
G + DD LV EF GS+ + + + T+ W I +G
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA--YICREILRG 141
Query: 196 LAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR--VMGTYGY 253
L+ LH + VI+RD K N+LL + KL DFG++ Q D T V R +GT +
Sbjct: 142 LSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDFGVS---AQLDRT-VGRRNTFIGTPYW 195
Query: 254 AAPEYVMTGH-----LTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLND 308
APE + +SD++S G+ +E+ G + P + L+ P
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP-RNPA--- 251
Query: 309 KRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARP 348
PRL+ S + ++K S CL +N RP
Sbjct: 252 ---------PRLK---SKKWSKKFQSFIESCLVKNHSQRP 279
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + G + VAVK L++ + + + E+ L ++H N+
Sbjct: 26 VGSGAYGSVCAAF---DTKTGHR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 135
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 136 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 188
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 85 ILGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
+LG+G +G VY G + VR+ +K +P + + + E+ L+H N+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIP-------ERDSRYSQPLHEEIALHKHLKHKNI 67
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK---GLAFLH 200
V+ +G E+ + E + GSL + L R PL I F + GL +LH
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLK-DNEQTIGFYTKQILEGLKYLH 125
Query: 201 NAERPVIYRDFKTSNILLDSDYTA--KLSDFGLAK--AGPQGDETHVSTRVMGTYGYAAP 256
+ + +++RD K N+L+++ Y+ K+SDFG +K AG + GT Y AP
Sbjct: 126 DNQ--IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGI----NPCTETFTGTLQYMAP 178
Query: 257 EYVMTG--HLTARSDVYSFGVVLLELLTGR 284
E + G +D++S G ++E+ TG+
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + G + VAVK L++ + + + E+ L ++H N+
Sbjct: 36 VGSGAYGSVCAAF---DTKTGHR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 145
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ +V+TR Y APE
Sbjct: 146 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 198
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQ--GHREWLTEVNFLGQLRHPNL 143
+G+G F V + R L VA+K+++K L ++ EV + L HPN+
Sbjct: 20 IGKGNFAKV------KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL + L+ E+ G + ++L + A +A + + H +
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA--VQYCH--Q 129
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
+ +++RD K N+LLD+D K++DFG + G + G+ YAAPE
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGKK 186
Query: 264 LTA-RSDVYSFGVVLLELLTGRKSVD 288
DV+S GV+L L++G D
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
S F E + + LG G F V K R A K + K L R
Sbjct: 3 STFRQEDVEDHYEMGEELGSGQFAIVRK------CRQKGTGKEYAAKFIKKRRLSSSRRG 56
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EVN L ++RHPN++ L +L+ E + G L + L K ++
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDE 116
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDY---TAKLSDFGLAKAGPQG 238
AT+ + G+ +LH+ + + + D K NI LLD + KL DFG+A G
Sbjct: 117 ATQFLKQI--LDGVHYLHS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 172
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 173 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 49/236 (20%)
Query: 84 YILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHP 141
+++G G +G VY Y D+N VA+K +N+ E L + L E+ L +L+
Sbjct: 32 HLIGRGSYGYVYLAY-DKNTEKN-----VAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 142 NLVKLIGYCCEDDHRLLVYEFMF-----RGSLENHLFRKATVPLSWATRMMIAFGAAKGL 196
+++L DD LL ++ ++ S LF K + L+ I + G
Sbjct: 86 YIIRLYDLIIPDD--LLKFDELYIVLEIADSDLKKLF-KTPIFLTEEHIKTILYNLLLGE 142
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-------------------GPQ 237
F+H E +I+RD K +N LL+ D + K+ DFGLA+ GP
Sbjct: 143 NFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200
Query: 238 GDE------THVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKS 286
+HV TR Y APE ++ +S D++S G + ELL +S
Sbjct: 201 NKNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ FGLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 45/301 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 E 355
+
Sbjct: 271 Q 271
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQ--GHREWLTEVNFLGQLRHPNL 143
+G+G F V + R L VA+K+++K L ++ EV + L HPN+
Sbjct: 23 IGKGNFAKV------KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL + L+ E+ G + ++L + A +A + + H +
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA--VQYCH--Q 132
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
+ +++RD K N+LLD+D K++DFG + G + G YAAPE
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGKK 189
Query: 264 LTA-RSDVYSFGVVLLELLTGRKSVD 288
DV+S GV+L L++G D
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 79 SFRSDYILGEGGFGTVYKGYI-DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
S+ ++G G FG VY+ + D V +K + LQ R E+ + +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----------LQDKRFKNRELQIMRK 69
Query: 138 LRHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMI 188
L H N+V+L + + + +VY + + ++R K T+P+ + M
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 128
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRV 247
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS
Sbjct: 129 -YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-- 182
Query: 248 MGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
+ + Y APE + T+ DV+S G VL ELL G+
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ D GLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 45/301 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 E 355
+
Sbjct: 271 Q 271
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 22/241 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+GEG G V + R VAVK+++ Q EV + +H N+V+
Sbjct: 53 IGEGSTGIVCLAREKHSGR------QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
+ + ++ EF+ G+L + + + V L+ + + LA+LH +
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHA--QG 161
Query: 206 VIYRDFKTSNILLDSDYTAKLSDFG----LAKAGPQGDETHVSTRVMGTYGYAAPEYVMT 261
VI+RD K+ +ILL D KLSDFG ++K P+ ++GT + APE +
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK------RKXLVGTPYWMAPEVISR 215
Query: 262 GHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKE-QSLVDWARPKLNDKRKMLQIIDPRL 320
D++S G++++E++ G P + + L D PKL + K+ ++ L
Sbjct: 216 SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFL 275
Query: 321 E 321
E
Sbjct: 276 E 276
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 56/341 (16%)
Query: 39 SISDLSDPSTPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGY 98
++S LS S PR + S+ + L I F E+ + +G+G FG VY G
Sbjct: 5 NLSLLSARSFPR--KASQTSIFLQEWDIPFEQLEIGEL---------IGKGRFGQVYHGR 53
Query: 99 IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLL 158
V + L + ++ N++ L+ + EV Q RH N+V +G C H L
Sbjct: 54 WHGEVAIRL----IDIERDNEDQLKAFKR---EVMAYRQTRHENVVLFMGACMSPPH-LA 105
Query: 159 VYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILL 218
+ + +G + R A + L IA KG+ +LH + ++++D K+ N+
Sbjct: 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH--AKGILHKDLKSKNVFY 163
Query: 219 DSDYTAKLSDFGL------AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH--------- 263
D+ ++DFGL +AG + D+ + G + APE +
Sbjct: 164 DNGKVV-ITDFGLFSISGVLQAGRREDKLRIQN---GWLCHLAPEIIRQLSPDTEEDKLP 219
Query: 264 LTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQ 323
+ SDV++ G + E L R+ KT+P++ + W +M + P L
Sbjct: 220 FSKHSDVFALGTIWYE-LHAREWPFKTQPAEA---IIW---------QMGTGMKPNLSQ- 265
Query: 324 YSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCAN 364
+ ++ + +C + + RP + +++ LE L N
Sbjct: 266 --IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 125/318 (39%), Gaps = 74/318 (23%)
Query: 75 TITKSFRSDY----ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT 130
T+ K F D+ ++G GGFG V+K R+ K+ + N E +
Sbjct: 5 TVDKRFGMDFKEIELIGSGGFGQVFKA----KHRIDGKTYVIRRVKYNNEKAE------R 54
Query: 131 EVNFLGQLRHPNLVKLIGYCCED---------DHRL----------------------LV 159
EV L +L H N+V G C D D L +
Sbjct: 55 EVKALAKLDHVNIVHYNG--CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQ 112
Query: 160 YEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLD 219
EF +G+LE + ++ L + + KG+ ++H+ + +I+RD K SNI L
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLV 170
Query: 220 SDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE 279
K+ DFGL + + TR GT Y +PE + + D+Y+ G++L E
Sbjct: 171 DTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
Query: 280 LLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYC 339
LL V T + D ++D I D +K +L
Sbjct: 228 LL----HVCDTAFETSKFFTDLRDGIISD------IFD------------KKEKTLLQKL 265
Query: 340 LSQNPKARPLMSDVVETL 357
LS+ P+ RP S+++ TL
Sbjct: 266 LSKKPEDRPNTSEILRTL 283
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ D GLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
+LG+G FG V + R G L AVK+L K+ + + + E L P
Sbjct: 27 VLGKGSFGKVML-----SERKGTDEL-YAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLH 200
+ + C + RL V E++ G L H+ + A + A A GL FL
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA--VFYAAEIAIGLFFLQ 138
Query: 201 NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+ + +IYRD K N++LDS+ K++DFG+ K T + GT Y APE +
Sbjct: 139 S--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIA 194
Query: 261 TGHLTARSDVYSFGVVLLELLTGR 284
D ++FGV+L E+L G+
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 67/299 (22%)
Query: 78 KSFRSDYI----LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE--GLQGHREW--- 128
K+ R +YI LG G G V + + + VA+++++K + RE
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCK------KVAIRIISKRKFAIGSAREADPA 198
Query: 129 ---LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-----ENHLFRKATVPL 180
TE+ L +L HP ++K+ + +D+ +V E M G L N ++AT L
Sbjct: 199 LNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL 257
Query: 181 SWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQ 237
+ +M++A + +LH E +I+RD K N+LL S D K++DFG +K
Sbjct: 258 -YFYQMLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--- 305
Query: 238 GDETHVSTRVMGTYGYAAPEYVM---TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSK 294
ET + + GT Y APE ++ T D +S GV+L L+G
Sbjct: 306 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG----------- 354
Query: 295 EQSLVDWARPKLNDKRKMLQIIDPRLENQYS------VRAAQKACSLAYYCLSQNPKAR 347
P ++ R + + D +Y+ ++KA L L +PKAR
Sbjct: 355 --------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 405
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 47/321 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 54
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 114
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 115 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 170
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 171 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 212
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 213 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 269
Query: 355 ETLEPLQCANDGGNEISSSLT 375
+ P D +SS+ +
Sbjct: 270 Q--HPWIKPKDTQQALSSAWS 288
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 47/321 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 54
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 114
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 115 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 170
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 171 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 212
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 213 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 269
Query: 355 ETLEPLQCANDGGNEISSSLT 375
+ P D +SS+ +
Sbjct: 270 Q--HPWIKPKDTQQALSSAWS 288
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 45/301 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 E 355
+
Sbjct: 271 Q 271
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 47/321 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGKFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 ETLEPLQCANDGGNEISSSLT 375
+ P D +SS+ +
Sbjct: 271 Q--HPWIKPKDTQQALSSAWS 289
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPNL 143
+G+G F V + R L VAVK+++K L ++ EV L HPN+
Sbjct: 22 IGKGNFAKV------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
VKL + LV E+ G + ++L A +A + + H +
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSA--VQYCH--Q 131
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
+ +++RD K N+LLD+D K++DFG + G++ G YAAPE
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKK 188
Query: 264 LTA-RSDVYSFGVVLLELLTGRKSVD 288
DV+S GV+L L++G D
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 67/299 (22%)
Query: 78 KSFRSDYI----LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKE--GLQGHREW--- 128
K+ R +YI LG G G V + + + VA+++++K + RE
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCK------KVAIRIISKRKFAIGSAREADPA 184
Query: 129 ---LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL-----ENHLFRKATVPL 180
TE+ L +L HP ++K+ + +D+ +V E M G L N ++AT L
Sbjct: 185 LNVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL 243
Query: 181 SWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQ 237
+ +M++A + +LH E +I+RD K N+LL S D K++DFG +K
Sbjct: 244 -YFYQMLLA------VQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--- 291
Query: 238 GDETHVSTRVMGTYGYAAPEYVM---TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSK 294
ET + + GT Y APE ++ T D +S GV+L L+G
Sbjct: 292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG----------- 340
Query: 295 EQSLVDWARPKLNDKRKMLQIIDPRLENQYS------VRAAQKACSLAYYCLSQNPKAR 347
P ++ R + + D +Y+ ++KA L L +PKAR
Sbjct: 341 --------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 391
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG--HREWLTEVNFLGQLRHPNL 143
LG+G F V + V+V L A K++N + L H++ E L+HPN+
Sbjct: 30 LGKGAFSVVRRC-----VKV-LAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+L E+ H L+++ + G L + + + A+ + A LH +
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE----AVLHCHQ 139
Query: 204 RPVIYRDFKTSNILLDSDY---TAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
V++RD K N+LL S KL+DFGLA +G E GT GY +PE +
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEG-EQQAWFGFAGTPGYLSPEVLR 197
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
D+++ GV+L LL G
Sbjct: 198 KDPYGKPVDLWACGVILYILLVG 220
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 45/301 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 E 355
+
Sbjct: 271 Q 271
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 47/321 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 ETLEPLQCANDGGNEISSSLT 375
+ P D +SS+ +
Sbjct: 271 Q--HPWIKPKDTQQALSSAWS 289
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + G + VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGHR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 42/242 (17%)
Query: 76 ITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVN 133
+ ++ +++G G +G VY Y D+N VA+K +N+ E L + L E+
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAY-DKNANKN-----VAIKKVNRMFEDLIDCKRILREIT 79
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMF-----RGSLENHLFRKATVPLSWATRMMI 188
L +L+ +++L +D LL ++ ++ S LF K + L+ I
Sbjct: 80 ILNRLKSDYIIRLHDLIIPED--LLKFDELYIVLEIADSDLKKLF-KTPIFLTEQHVKTI 136
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS---- 244
+ G F+H E +I+RD K +N LL+ D + K+ DFGLA+ + H+
Sbjct: 137 LYNLLLGEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLE 194
Query: 245 -------------------TRVMGTYGYAAPEYV-MTGHLTARSDVYSFGVVLLELLTGR 284
T + T Y APE + + + T D++S G + ELL
Sbjct: 195 EKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMM 254
Query: 285 KS 286
KS
Sbjct: 255 KS 256
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + G + VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGHR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 45/301 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 E 355
+
Sbjct: 271 Q 271
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 45/301 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 E 355
+
Sbjct: 271 Q 271
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + G + VAVK L++ + + + E+ L ++H N+
Sbjct: 26 VGSGAYGSVCAAF---DTKTGHR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 135
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DFGLA+ V+TR Y APE
Sbjct: 136 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPE 188
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT------EVNFLGQLR 139
LG G F V K R A K + K L R ++ EVN L ++R
Sbjct: 13 LGSGQFAIVRK------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
HPN++ L +L+ E + G L + L K ++ AT+ + G+ +L
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYL 124
Query: 200 HNAERPVIYRDFKTSNI-LLDSDY---TAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
H+ + + + D K NI LLD + KL DFG+A G+E + GT + A
Sbjct: 125 HS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVA 179
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE V L +D++S GV+ LL+G
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + GL+ VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ D GLA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 45/301 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 E 355
+
Sbjct: 271 Q 271
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 104
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 162
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVM 248
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 163 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-IC 218
Query: 249 GTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTGR 284
Y Y APE + T+ DV+S G VL ELL G+
Sbjct: 219 SRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 23/222 (10%)
Query: 76 ITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN--KEGLQGHREWLTEVN 133
I+ F+ +LGEG +G V + VA+K + + L R L E+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEI------VAIKKIEPFDKPLFALRT-LREIK 61
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGA 192
L +H N++ + D ++ + ++ L R +T LS +
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK---------AGPQGDETHV 243
+ + LH + VI+RD K SN+L++S+ K+ DFGLA+ + P G ++ +
Sbjct: 122 LRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 244 STRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGR 284
T + T Y APE ++T +R+ DV+S G +L EL R
Sbjct: 180 -TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 47/321 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGVFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 ETLEPLQCANDGGNEISSSLT 375
+ P D +SS+ +
Sbjct: 271 Q--HPWIKPKDTQQALSSAWS 289
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 79 SFRSDYILGEGGFGTVYKGYI-DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
S+ ++G G FG VY+ + D V +K + LQ R E+ + +
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----------LQDKRFKNRELQIMRK 88
Query: 138 LRHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMI 188
L H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 89 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 147
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRV 247
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 148 -YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-I 202
Query: 248 MGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
Y Y APE + T+ DV+S G VL ELL G+
Sbjct: 203 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 78
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 136
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVM 248
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 137 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-IC 192
Query: 249 GTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
Y Y APE + T+ DV+S G VL ELL G+
Sbjct: 193 SRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 104
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 162
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVM 248
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 163 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVS--YI 217
Query: 249 GTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTGR 284
+ Y APE + T+ DV+S G VL ELL G+
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 47/321 (14%)
Query: 69 SLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++F E + + + LG G F V K R L A K + K + R
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKK------CREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 129 LT------EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSW 182
++ EV+ L +++HPN++ L +L+ E + G L + L K ++
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEE 115
Query: 183 ATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQG 238
AT + G+ +LH+ + + + D K NI LLD + K+ DFGLA G
Sbjct: 116 ATEFLKQI--LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+E + GT + APE V L +D++S GV+ LL+G
Sbjct: 172 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--------------- 213
Query: 299 VDWARPKLNDKRKM----LQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVV 354
A P L D ++ + ++ E++Y + A L ++PK R + D +
Sbjct: 214 ---ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 355 ETLEPLQCANDGGNEISSSLT 375
+ P D +SS+ +
Sbjct: 271 Q--HPWIKPKDTQQALSSAWS 289
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 106
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 164
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVM 248
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 165 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVS--YI 219
Query: 249 GTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTGR 284
+ Y APE + T+ DV+S G VL ELL G+
Sbjct: 220 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 82
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 140
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVM 248
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 141 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-IC 196
Query: 249 GTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
Y Y APE + T+ DV+S G VL ELL G+
Sbjct: 197 SRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 23/222 (10%)
Query: 76 ITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN--KEGLQGHREWLTEVN 133
I+ F+ +LGEG +G V + VA+K + + L R L E+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEI------VAIKKIEPFDKPLFALRT-LREIK 61
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGA 192
L +H N++ + D ++ + ++ L R +T LS +
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK---------AGPQGDETHV 243
+ + LH + VI+RD K SN+L++S+ K+ DFGLA+ + P G ++ +
Sbjct: 122 LRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 244 STRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGR 284
T + T Y APE ++T +R+ DV+S G +L EL R
Sbjct: 180 -TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL---QGHREWLTEVNFLGQLRHPN 142
LG G +G V + L A+K++ K + L EV L QL HPN
Sbjct: 29 LGSGAYGEVLL------CKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
++KL + + + LV E G L + + + S +I G +LH
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK--FSEVDAAVIMKQVLSGTTYLH-- 138
Query: 203 ERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
+ +++RD K N+LL+S D K+ DFGL+ G + +GT Y APE V
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYYIAPE-V 194
Query: 260 MTGHLTARSDVYSFGVVLLELLTG 283
+ + DV+S GV+L LL G
Sbjct: 195 LRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT------EVNFLGQLR 139
LG G F V K R A K + K L R ++ EVN L ++R
Sbjct: 34 LGSGQFAIVRK------CRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
HPN++ L +L+ E + G L + L K ++ AT+ + G+ +L
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYL 145
Query: 200 HNAERPVIYRDFKTSNI-LLDSDY---TAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
H+ + + + D K NI LLD + KL DFG+A G+E + GT + A
Sbjct: 146 HS--KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVA 200
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE V L +D++S GV+ LL+G
Sbjct: 201 PEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 108
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 166
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVM 248
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 167 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVS--YI 221
Query: 249 GTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTGR 284
+ Y APE + T+ DV+S G VL ELL G+
Sbjct: 222 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 82
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 140
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVM 248
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 141 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-IC 196
Query: 249 GTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
Y Y APE + T+ DV+S G VL ELL G+
Sbjct: 197 SRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 79 SFRSDYILGEGGFGTVYKGYI-DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
S+ ++G G FG VY+ + D V +K + LQ R E+ + +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----------LQDKRFKNRELQIMRK 69
Query: 138 LRHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMI 188
L H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 128
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRV 247
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS
Sbjct: 129 -YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-- 182
Query: 248 MGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
+ + Y APE + T+ DV+S G VL ELL G+
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 98
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 156
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVM 248
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 157 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVS--YI 211
Query: 249 GTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTGR 284
+ Y APE + T+ DV+S G VL ELL G+
Sbjct: 212 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 143/321 (44%), Gaps = 50/321 (15%)
Query: 75 TITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVL-NKEGLQGHREWLTEVN 133
TI K + +G+G +G V+ G + VAVKV E RE TE+
Sbjct: 34 TIAKQIQMVKQIGKGRYGEVWMG--------KWRGEKVAVKVFFTTEEASWFRE--TEIY 83
Query: 134 FLGQLRHPNLVKLIGYCCED-------DHRLLVYEFMFRGSLENHLFRKATVPLSWATRM 186
+RH N+ +G+ D L+ ++ GSL ++L K+T L + +
Sbjct: 84 QTVLMRHENI---LGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTT-LDAKSML 137
Query: 187 MIAFGAAKGLAFLHN-----AERPVI-YRDFKTSNILLDSDYTAKLSDFGLA-KAGPQGD 239
+A+ + GL LH +P I +RD K+ NIL+ + T ++D GLA K +
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197
Query: 240 ETHV--STRVMGTYGYAAPEY----VMTGHLTA--RSDVYSFGVVLLELLTGRKSVDKTR 291
E + +TRV GT Y PE + H + +D+YSFG++L E+ R+ V
Sbjct: 198 EVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGI 254
Query: 292 PSKEQ----SLVDWARPKLNDKRKMLQI--IDPRLENQYSV-RAAQKACSLAYYCLSQNP 344
+ Q LV + P D R+++ I + P N++S ++ L C + NP
Sbjct: 255 VEEYQLPYHDLVP-SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNP 313
Query: 345 KARPLMSDVVETLEPLQCAND 365
+R V +TL + + D
Sbjct: 314 ASRLTALRVKKTLAKMSESQD 334
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 83
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 141
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVM 248
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 142 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVS--YI 196
Query: 249 GTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
+ Y APE + T+ DV+S G VL ELL G+
Sbjct: 197 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 32/219 (14%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 149
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 207
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDE--THVSTR 246
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G+ +++ +R
Sbjct: 208 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 265
Query: 247 VMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTGR 284
Y APE + T+ DV+S G VL ELL G+
Sbjct: 266 Y-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 35/270 (12%)
Query: 42 DLSDPSTPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGY 98
D+S + N+ S+ + Y+ + S F T+ K +++ +G G G V Y
Sbjct: 29 DVSYIAKHYNMSKSKVDNQFYSVEVGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAV 85
Query: 99 IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------E 152
+D NV + S P + K + E+ + + H N++ L+ E
Sbjct: 86 LDRNVAIKKLSRPFQNQTHAKRAYR-------ELVLMKCVNHKNIISLLNVFTPQKTLEE 138
Query: 153 DDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFK 212
LV E M + +L + + L + + G+ LH+A +I+RD K
Sbjct: 139 FQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLK 191
Query: 213 TSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYS 272
SNI++ SD T K+ DFGLA+ G ++ V+ Y Y APE ++ D++S
Sbjct: 192 PSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWS 248
Query: 273 FGVVLLE------LLTGRKSVDKTRPSKEQ 296
G ++ E L GR +D+ EQ
Sbjct: 249 VGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 79 SFRSDYILGEGGFGTVYKGYI-DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
S+ ++G G FG VY+ + D V +K + LQ R E+ + +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----------LQDKRFKNRELQIMRK 69
Query: 138 LRHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMI 188
L H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 128
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRV 247
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS
Sbjct: 129 -YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-- 182
Query: 248 MGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
+ + Y APE + T+ DV+S G VL ELL G+
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 75
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 133
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVM 248
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 134 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVS--YI 188
Query: 249 GTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
+ Y APE + T+ DV+S G VL ELL G+
Sbjct: 189 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 54/307 (17%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ--LRHPNL 143
+G+G +G V++G VAVK+ + Q W E LRH N+
Sbjct: 16 VGKGRYGEVWRGL--------WHGESVAVKIFSSRDEQS---WFRETEIYNTVLLRHDNI 64
Query: 144 VKLIGYCCED-------DHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGL 196
+G+ D L+ + GSL + L R+ P + +A AA GL
Sbjct: 65 ---LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP---HLALRLAVSAACGL 118
Query: 197 AFLH-----NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD---ETHVSTRV 247
A LH +P I +RDFK+ N+L+ S+ ++D GLA QG + + RV
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV 178
Query: 248 MGTYGYAAPEYVMTGHLT------ARSDVYSFGVVLLELLTGRKS-----VDKTRPSKEQ 296
GT Y APE + T +D+++FG+VL E+ R++ V+ RP
Sbjct: 179 -GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVEDYRPPFYD 235
Query: 297 SLVDWARPKLNDKRKMLQIID--PRLENQYSVRAAQKACS-LAYYCLSQNPKARPLMSDV 353
+ + P D +K++ + P + N+ + + + C NP AR +
Sbjct: 236 VVPN--DPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRI 293
Query: 354 VETLEPL 360
+TL+ +
Sbjct: 294 KKTLQKI 300
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 143/325 (44%), Gaps = 31/325 (9%)
Query: 83 DYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPN 142
D LGEG F K ++ + AVK+++K ++ +T + HPN
Sbjct: 16 DKPLGEGSFSICRKCVHKKSNQA------FAVKIISKRMEANTQKEITALKLCEG--HPN 67
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
+VKL + H LV E + G L + +K + A+ +M +A ++ +H+
Sbjct: 68 IVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA--VSHMHDV 125
Query: 203 ERPVIYRDFKTSNILL---DSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYV 259
V++RD K N+L + + K+ DFG A+ P D + T T YAAPE +
Sbjct: 126 --GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF-TLHYAAPELL 181
Query: 260 MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPR 319
D++S GV+L +L+G+ S ++SL + ++ K ++ D
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQ----SHDRSLTCTSAVEI---MKKIKKGDFS 234
Query: 320 LENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQCANDGGNEISSS--LTAN 377
E + +Q+A L L+ +P R MS + E LQ G+++SS+ +T +
Sbjct: 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN-EWLQ----DGSQLSSNPLMTPD 289
Query: 378 LVVAAGGATNAFAMGGIPGYRTRPR 402
++ ++G A + + R
Sbjct: 290 ILGSSGAAVHTCVKATFHAFNKYKR 314
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 86 LGEGGFGTVYKGYIDENVR-VGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLR---H 140
+G G +GTVYK + V LKS V+V N +EGL + EV L +L H
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKS----VRVPNGEEGLPIST--VREVALLRRLEAFEH 65
Query: 141 PNLVKLIGYCCED--DHRL---LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKG 195
PN+V+L+ C D + LV+E + + L +L + L T + +G
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 196 LAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
L FLH +++RD K NIL+ S T KL+DFGLA+ V+ T Y A
Sbjct: 125 LDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPVVVTLWYRA 179
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELL 281
PE ++ D++S G + E+
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 115/280 (41%), Gaps = 27/280 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVG-LKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
LG+G F ++KG E G L V +KVL+K + + + +L H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFR-KATVPLSWATRMMIAFGAAKGLAFLHNAE 203
G C D +LV EF+ GSL+ +L + K + + W ++ +A A + FL E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLE--E 131
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR--VMGTYGYAAPEYVMT 261
+I+ + NILL + K + K G V + + + PE +
Sbjct: 132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 262 -GHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRL 320
+L +D +SFG L E+ +G D L+ +RK LQ + R
Sbjct: 192 PKNLNLATDKWSFGTTLWEICSGG---------------DKPLSALDSQRK-LQFYEDR- 234
Query: 321 ENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
+Q A + +L C+ P RP ++ L L
Sbjct: 235 -HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
L EV L QL HPN++KL + + + LV E G L + + + S +I
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ--KFSEVDAAVI 109
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVST 245
G +LH + +++RD K N+LL+S D K+ DFGL+ G +
Sbjct: 110 MKQVLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---K 164
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+GT Y APE V+ + DV+S GV+L LL G
Sbjct: 165 ERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 79 SFRSDYILGEGGFGTVYKGYI-DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
S+ ++G G FG VY+ + D V +K + LQ R E+ + +
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----------LQDKRFKNRELQIMRK 70
Query: 138 LRHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMI 188
L H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 71 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 129
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRV 247
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS
Sbjct: 130 -YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-- 183
Query: 248 MGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
+ + Y APE + T+ DV+S G VL ELL G+
Sbjct: 184 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 79 SFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQL 138
S+ ++G G FG VY+ + ++ + VA+K + LQ R E+ + +L
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGEL------VAIKKV----LQDKRFKNRELQIMRKL 74
Query: 139 RHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMIA 189
H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-- 132
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRVM 248
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS +
Sbjct: 133 YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-IC 188
Query: 249 GTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTGR 284
Y Y APE + T+ DV+S G VL ELL G+
Sbjct: 189 SRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 35/270 (12%)
Query: 42 DLSDPSTPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGY 98
D+S + N+ S+ + Y+ + S F T+ K +++ +G G G V Y
Sbjct: 29 DVSYIAKHYNMSKSKVDNQFYSVEVGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAV 85
Query: 99 IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------E 152
+D NV + S P + K + E+ + + H N++ L+ E
Sbjct: 86 LDRNVAIKKLSRPFQNQTHAKRAYR-------ELVLMKCVNHKNIISLLNVFTPQKTLEE 138
Query: 153 DDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFK 212
LV E M + +L + + L + + G+ LH+A +I+RD K
Sbjct: 139 FQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLK 191
Query: 213 TSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYS 272
SNI++ SD T K+ DFGLA+ G ++ V+ Y Y APE ++ D++S
Sbjct: 192 PSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWS 248
Query: 273 FGVVLLE------LLTGRKSVDKTRPSKEQ 296
G ++ E L GR +D+ EQ
Sbjct: 249 VGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 79 SFRSDYILGEGGFGTVYKGYI-DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
S+ ++G G FG VY+ + D V +K + LQ R E+ + +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----------LQDKRFKNRELQIMRK 69
Query: 138 LRHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMI 188
L H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 128
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRV 247
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS
Sbjct: 129 -YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVS--Y 182
Query: 248 MGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
+ + Y APE + T+ DV+S G VL ELL G+
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 121/286 (42%), Gaps = 44/286 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN--KEGLQGHREWLTEVNFLGQLRHPNL 143
L E G ++KG N + VKVL + R++ E L HPN+
Sbjct: 18 LNENHSGELWKGRWQGN--------DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 144 VKLIGYCCEDD--HRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+ ++G C H L+ +M GSL N L + + + A A+G+AFLH
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT 129
Query: 202 AERPVIYRD-FKTSNILLDSDYTAKLS--DFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
E P+I R + ++++D D TA++S D + P M + APE
Sbjct: 130 LE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR---------MYAPAWVAPEA 179
Query: 259 VMTG-HLTAR--SDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQI 315
+ T R +D++SF V+L EL+T +E D + ++ K L+
Sbjct: 180 LQKKPEDTNRRSADMWSFAVLLWELVT-----------REVPFADLSNMEIGMKVA-LEG 227
Query: 316 IDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ 361
+ P + S ++ L C++++P RP +V LE +Q
Sbjct: 228 LRPTIPPGISPHVSK----LMKICMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 34/220 (15%)
Query: 79 SFRSDYILGEGGFGTVYKGYI-DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
S+ ++G G FG VY+ + D V +K KVL + + E+ + +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQGKAFKNR-----ELQIMRK 69
Query: 138 LRHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMI 188
L H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 128
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDE--THVST 245
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G+ +++ +
Sbjct: 129 -YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 246 RVMGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
R Y APE + T+ DV+S G VL ELL G+
Sbjct: 186 RY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 86 LGEGGFGTVYKGYIDENVR-VGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLR---H 140
+G G +GTVYK + V LKS V+V N +EGL + EV L +L H
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKS----VRVPNGEEGLPIST--VREVALLRRLEAFEH 65
Query: 141 PNLVKLIGYCC--EDDHRL---LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKG 195
PN+V+L+ C D + LV+E + + L +L + L T + +G
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 196 LAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
L FLH +++RD K NIL+ S T KL+DFGLA+ V+ T Y A
Sbjct: 125 LDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALDPVVVTLWYRA 179
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELL 281
PE ++ D++S G + E+
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 34/220 (15%)
Query: 79 SFRSDYILGEGGFGTVYKGYI-DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
S+ ++G G FG VY+ + D V +K KVL + + E+ + +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQGKAFKNR-----ELQIMRK 69
Query: 138 LRHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMI 188
L H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM- 128
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDE--THVST 245
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G+ +++ +
Sbjct: 129 -YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 246 RVMGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
R Y APE + T+ DV+S G VL ELL G+
Sbjct: 186 RY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 73
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERM 128
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 129 SYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTP 184
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 120/289 (41%), Gaps = 44/289 (15%)
Query: 86 LGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG--QLRHPN 142
+G+G +G V++G + ENV AVK+ + + + W E LRH N
Sbjct: 45 VGKGRYGEVWRGSWQGENV---------AVKIFSS---RDEKSWFRETELYNTVMLRHEN 92
Query: 143 LVKLIGYCCEDDHR----LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAF 198
++ I H L+ + GSL ++L L + + I A GLA
Sbjct: 93 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAH 149
Query: 199 LH-----NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLAKAGPQG-DETHVSTRV-MGT 250
LH +P I +RD K+ NIL+ + ++D GLA Q ++ V +GT
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 209
Query: 251 YGYAAPEY------VMTGHLTARSDVYSFGVVLLEL---LTGRKSVDKTRPSKEQSLVDW 301
Y APE V R D+++FG+VL E+ + V+ +P + +
Sbjct: 210 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN- 268
Query: 302 ARPKLNDKRKMLQIID--PRLENQY-SVRAAQKACSLAYYCLSQNPKAR 347
P D RK++ + P + N++ S L C QNP AR
Sbjct: 269 -DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVNFLGQLRHPNL 143
+G G +G+V + + + G + VAVK L++ + + + E+ L ++H N+
Sbjct: 30 VGSGAYGSVCAAF---DTKTGHR---VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 144 VKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ L+ E + LV M G+ N++ + L+ + + +GL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVK--CQKLTDDHVQFLIYQILRGLK 139
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
++H+A+ +I+RD K SN+ ++ D K+ DF LA+ +V+TR Y APE
Sbjct: 140 YIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYRAPE 192
Query: 258 YVMTG-HLTARSDVYSFGVVLLELLTGR 284
++ H D++S G ++ ELLTGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 76 ITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN--KEGLQGHREWLTEVN 133
I+ F+ +LGEG +G V + VA+K + + L R L E+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEI------VAIKKIEPFDKPLFALRT-LREIK 61
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGA 192
L +H N++ + D ++ + ++ L R +T LS +
Sbjct: 62 ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT 121
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK---------AGPQGDETHV 243
+ + LH + VI+RD K SN+L++S+ K+ DFGLA+ + P G ++ +
Sbjct: 122 LRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 244 STRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGR 284
+ T Y APE ++T +R+ DV+S G +L EL R
Sbjct: 180 -VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 79 SFRSDYILGEGGFGTVYKGYI-DENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQ 137
S+ ++G G FG VY+ + D V +K KVL + + E+ + +
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK------KVLQGKAFKNR-----ELQIMRK 69
Query: 138 LRHPNLVKL-IGYCCEDDHRLLVYEFMFRGSLENHLFR--------KATVPLSWATRMMI 188
L H N+V+L + + + VY + + ++R K T+P+ + M
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM- 128
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA-KLSDFGLAKAGPQGDETHVSTRV 247
+ + LA++H+ + +RD K N+LLD D KL DFG AK +G E +VS
Sbjct: 129 -YQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSX-- 182
Query: 248 MGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
+ + Y APE + T+ DV+S G VL ELL G+
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 86 LGEGGFGTVYKGYID-ENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+G G +G V +V +K +P A V+ + L E+ L +H N++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNA-----KRTLRELKILKHFKHDNII 117
Query: 145 KL-------IGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ + Y E +V + M + H ++ PL+ + +GL
Sbjct: 118 AIKDILRPTVPYG-EFKSVYVVLDLM---ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 173
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA--GPQGDETHVSTRVMGTYGYAA 255
++H+A+ VI+RD K SN+L++ + K+ DFG+A+ + + T + T Y A
Sbjct: 174 YMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 256 PEYVMTGH-LTARSDVYSFGVVLLELLTGRK 285
PE +++ H T D++S G + E+L R+
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 125/303 (41%), Gaps = 46/303 (15%)
Query: 86 LGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG--QLRHPN 142
+G+G +G V++G + ENV AVK+ + + + W E LRH N
Sbjct: 16 VGKGRYGEVWRGSWQGENV---------AVKIFSS---RDEKSWFRETELYNTVMLRHEN 63
Query: 143 LVKLIGYCCEDDHR----LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAF 198
++ I H L+ + GSL ++L L + + I A GLA
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAH 120
Query: 199 LH-----NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD---ETHVSTRVMG 249
LH +P I +RD K+ NIL+ + ++D GLA Q + + RV G
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-G 179
Query: 250 TYGYAAPEY------VMTGHLTARSDVYSFGVVLLEL---LTGRKSVDKTRPSKEQSLVD 300
T Y APE V R D+++FG+VL E+ + V+ +P + +
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239
Query: 301 WARPKLNDKRKMLQIID--PRLENQY-SVRAAQKACSLAYYCLSQNPKARPLMSDVVETL 357
P D RK++ + P + N++ S L C QNP AR + +TL
Sbjct: 240 --DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297
Query: 358 EPL 360
+
Sbjct: 298 TKI 300
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 125/303 (41%), Gaps = 46/303 (15%)
Query: 86 LGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLG--QLRHPN 142
+G+G +G V++G + ENV AVK+ + + + W E LRH N
Sbjct: 16 VGKGRYGEVWRGSWQGENV---------AVKIFSS---RDEKSWFRETELYNTVMLRHEN 63
Query: 143 LVKLIGYCCEDDHR----LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAF 198
++ I H L+ + GSL ++L L + + I A GLA
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAH 120
Query: 199 LH-----NAERPVI-YRDFKTSNILLDSDYTAKLSDFGLAKAGPQGD---ETHVSTRVMG 249
LH +P I +RD K+ NIL+ + ++D GLA Q + + RV G
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-G 179
Query: 250 TYGYAAPEY------VMTGHLTARSDVYSFGVVLLEL---LTGRKSVDKTRPSKEQSLVD 300
T Y APE V R D+++FG+VL E+ + V+ +P + +
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239
Query: 301 WARPKLNDKRKMLQIID--PRLENQY-SVRAAQKACSLAYYCLSQNPKARPLMSDVVETL 357
P D RK++ + P + N++ S L C QNP AR + +TL
Sbjct: 240 --DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297
Query: 358 EPL 360
+
Sbjct: 298 TKI 300
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 86 LGEGGFGTVYKGYIDENVR-VGLKSLPVAVKVLN-KEGLQGHREWLTEVNFLGQLR---H 140
+G G +GTVYK + V LKS V+V N +EGL + EV L +L H
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKS----VRVPNGEEGLPIST--VREVALLRRLEAFEH 65
Query: 141 PNLVKLIGYCCED--DHRL---LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKG 195
PN+V+L+ C D + LV+E + + L +L + L T + +G
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 196 LAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
L FLH +++RD K NIL+ S T KL+DFGLA+ V+ T Y A
Sbjct: 125 LDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALFPVVVTLWYRA 179
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELL 281
PE ++ D++S G + E+
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 130/308 (42%), Gaps = 48/308 (15%)
Query: 80 FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
R +L EGGF VY+ ++V G + A+K L + +R + EV F+ +L
Sbjct: 30 LRVRRVLAEGGFAFVYEA---QDVGSGRE---YALKRLLSNEEEKNRAIIQEVCFMKKLS 83
Query: 140 -HPNLVKL-----IGYCCED--DHRLLVYEFMFRGSLENHLFR-KATVPLSWATRMMIAF 190
HPN+V+ IG D L+ + +G L L + ++ PLS T + I +
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFY 143
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG- 249
+ + +H + P+I+RD K N+LL + T KL DFG A + S +
Sbjct: 144 QTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRAL 203
Query: 250 ---------TYGYAAPEYV---MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQS 297
T Y PE + + + D+++ G +L L ++
Sbjct: 204 VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF-----------RQHP 252
Query: 298 LVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETL 357
D A+ ++ + + + P + QY+V SL L NP+ R +++VV L
Sbjct: 253 FEDGAKLRIVNGKYSI----PPHDTQYTVFH-----SLIRAMLQVNPEERLSIAEVVHQL 303
Query: 358 EPLQCAND 365
+ + A +
Sbjct: 304 QEIAAARN 311
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
++G G FG V++ + E+ V +K + LQ R E+ + ++HPN+V
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKV-----------LQDKRFKNRELQIMRIVKHPNVV 95
Query: 145 KLIGYCCED----DHRLL------VYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK 194
L + + D L V E ++R S ++ K T+P+ M + +
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRAS-RHYAKLKQTMPMLLIKLYM--YQLLR 152
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
LA++H+ + +RD K N+LLD KL DFG AK G E +VS + Y Y
Sbjct: 153 SLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG-EPNVSX-ICSRY-Y 207
Query: 254 AAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
APE + + T D++S G V+ EL+ G+
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 86 LGEGGFGTVYKGYIDENVR-VGLKSLPVAVKVLNKEGLQGHREWLT--EVNFLGQLR--- 139
+G G +GTVYK + V LKS V+V N G G T EV L +L
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKS----VRVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 140 HPNLVKLIGYCCED--DHRL---LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAK 194
HPN+V+L+ C D + LV+E + + L +L + L T + +
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 131
Query: 195 GLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYA 254
GL FLH +++RD K NIL+ S T KL+DFGLA+ T V+ T Y
Sbjct: 132 GLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALTPVVVTLWYR 186
Query: 255 APEYVMTGHLTARSDVYSFGVVLLELL 281
APE ++ D++S G + E+
Sbjct: 187 APEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 73
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERM 128
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 129 SYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTP 184
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 66
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERM 121
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 122 SYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTP 177
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 178 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 86 LGEGGFGTVYKGYID-ENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
+G G +G V +V +K +P A V+ + L E+ L +H N++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNA-----KRTLRELKILKHFKHDNII 116
Query: 145 KL-------IGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
+ + Y E +V + M + H ++ PL+ + +GL
Sbjct: 117 AIKDILRPTVPYG-EFKSVYVVLDLM---ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 172
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA--GPQGDETHVSTRVMGTYGYAA 255
++H+A+ VI+RD K SN+L++ + K+ DFG+A+ + + T + T Y A
Sbjct: 173 YMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 256 PEYVMTGH-LTARSDVYSFGVVLLELLTGRK 285
PE +++ H T D++S G + E+L R+
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
++G G FG V + VR A+K+L+K + + + E + + P
Sbjct: 76 VIGRGAFGEV------QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWA----TRMMIAFGAAKGL 196
+V+L Y +DD L +V E+M G L N L VP WA +++A A +
Sbjct: 130 WVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSM 187
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
F+H RD K N+LLD KL+DFG + T V GT Y +P
Sbjct: 188 GFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISP 238
Query: 257 EYVMT----GHLTARSDVYSFGVVLLELLTG 283
E + + G+ D +S GV L E+L G
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 115/280 (41%), Gaps = 27/280 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVG-LKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
LG+G F ++KG E G L V +KVL+K + + + +L H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 145 KLIGYCCEDDHRLLVYEFMFRGSLENHLFR-KATVPLSWATRMMIAFGAAKGLAFLHNAE 203
G C D +LV EF+ GSL+ +L + K + + W ++ +A A + FL E
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLE--E 131
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTR--VMGTYGYAAPEYVMT 261
+I+ + NILL + K + K G V + + + PE +
Sbjct: 132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 262 -GHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRL 320
+L +D +SFG L E+ +G D L+ +RK LQ + R
Sbjct: 192 PKNLNLATDKWSFGTTLWEICSGG---------------DKPLSALDSQRK-LQFYEDR- 234
Query: 321 ENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPL 360
+Q A + +L C+ P RP ++ L L
Sbjct: 235 -HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
++G G FG V + VR A+K+L+K + + + E + + P
Sbjct: 81 VIGRGAFGEV------QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWA----TRMMIAFGAAKGL 196
+V+L Y +DD L +V E+M G L N L VP WA +++A A +
Sbjct: 135 WVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
F+H RD K N+LLD KL+DFG + T V GT Y +P
Sbjct: 193 GFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISP 243
Query: 257 EYVMT----GHLTARSDVYSFGVVLLELLTG 283
E + + G+ D +S GV L E+L G
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 80 FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
F+ + + G+G FGTV G + + VA+K + ++ +RE L + L L
Sbjct: 25 FQVERMAGQGTFGTVQLG------KEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLH 77
Query: 140 HPNLVKLIGY---CCEDDHRLL----VYEFM---FRGSLENHLFRKATVPLSWATRMMIA 189
HPN+V+L Y E D R + V E++ N+ +R+ P ++ +
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNY-YRRQVAPPPILIKVFL- 135
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILL-DSDYTAKLSDFGLAK--AGPQGDETHVSTR 246
F + + LH V +RD K N+L+ ++D T KL DFG AK + + + ++ +R
Sbjct: 136 FQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR 195
Query: 247 VMGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTG 283
Y APE + H T D++S G + E++ G
Sbjct: 196 Y-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 73
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERM 128
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 129 SYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTP 184
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHRE---WLTEVNFLGQLRHP 141
++G G FG V + VR A+K+L+K + + + E + + P
Sbjct: 81 VIGRGAFGEV------QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 142 NLVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWA----TRMMIAFGAAKGL 196
+V+L Y +DD L +V E+M G L N L VP WA +++A A +
Sbjct: 135 WVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAP 256
F+H RD K N+LLD KL+DFG + T V GT Y +P
Sbjct: 193 GFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISP 243
Query: 257 EYVMT----GHLTARSDVYSFGVVLLELLTG 283
E + + G+ D +S GV L E+L G
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 73
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERM 128
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 129 SYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTP 184
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 27/225 (12%)
Query: 71 FELETITKSFRSDYIL----GEGGFGTVYKGYIDENVRVGLKSLPV---AVKVLNKEGLQ 123
F+ F DY L G+G F V R +K P A K++N + L
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVV---------RRCVKKTPTQEYAAKIINTKKLS 70
Query: 124 G--HREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLS 181
H++ E L+HPN+V+L E+ LV++ + G L + + +
Sbjct: 71 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA 130
Query: 182 WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQG 238
A+ + + H + +++RD K N+LL S KL+DFGLA QG
Sbjct: 131 DASHCIHQILESVN----HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQG 185
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
E GT GY +PE + D+++ GV+L LL G
Sbjct: 186 -EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 86 LGEGGFGTVYKGYIDE--NVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
LGEG +G VYK ID N V +K + + + +EG+ G + EV+ L +L+H N+
Sbjct: 42 LGEGTYGEVYKA-IDTVTNETVAIKRIRLEHE---EEGVPGTA--IREVSLLKELQHRNI 95
Query: 144 VKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
++L +HRL L++E+ L+ ++ + V + + + G+ F H+
Sbjct: 96 IELKS-VIHHNHRLHLIFEYA-ENDLKKYMDKNPDVSMRVIKSFL--YQLINGVNFCHS- 150
Query: 203 ERPVIYRDFKTSNILL---DSDYTA--KLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPE 257
R ++RD K N+LL D+ T K+ DFGLA+A G T + T Y PE
Sbjct: 151 -RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPPE 207
Query: 258 YVM-TGHLTARSDVYSFGVVLLELL 281
++ + H + D++S + E+L
Sbjct: 208 ILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLL--VYEFMFRGSLENHLFR----KATVPLSW 182
++EVN L +L+HPN+V+ + + L V E+ G L + + + + + +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 183 ATRMMIAFGAA-KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET 241
R+M A K + V++RD K +N+ LD KL DFGLA+ +T
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDT 170
Query: 242 HVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEL 280
+ +GT Y +PE + +SD++S G +L EL
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 74
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERM 129
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 130 SYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 185
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 186 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLL--VYEFMFRGSLENHLFR----KATVPLSW 182
++EVN L +L+HPN+V+ + + L V E+ G L + + + + + +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 183 ATRMMIAFGAA-KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET 241
R+M A K + V++RD K +N+ LD KL DFGLA+ +T
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDT 170
Query: 242 HVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEL 280
+ +GT Y +PE + +SD++S G +L EL
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 73
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERM 128
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 129 SYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 184
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 74
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERM 129
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 130 SYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 185
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 186 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 90/222 (40%), Gaps = 57/222 (25%)
Query: 86 LGEGGFGTVYKGY-IDENVRVGLKSL------PVAVKVLNKEGLQGHREWLTEVNFLGQL 138
+GEG +G V+K D V +K PV K+ L E+ L QL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA-----------LREIRMLKQL 59
Query: 139 RHPNLVKLIG-------------YCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+HPNLV L+ YC DH +L ++ + HL + T W T
Sbjct: 60 KHPNLVNLLEVFRRKRRLHLVFEYC---DHTVLHELDRYQRGVPEHLVKSIT----WQTL 112
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAK--AGPQG-DETH 242
+ F HN I+RD K NIL+ KL DFG A+ GP +
Sbjct: 113 QAVNFCHK------HNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE 162
Query: 243 VSTRVMGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTG 283
V+TR Y +PE ++ DV++ G V ELL+G
Sbjct: 163 VATR-----WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 20 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 72
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 73 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERM 127
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 128 SYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 183
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 184 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 239
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 67
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERM 122
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 123 SYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 178
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 179 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 73
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERM 128
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 129 SYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 184
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 66
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERM 121
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 122 SYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 177
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 178 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y +D NV + S P + K + E
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-------E 67
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E LV E M + +L + + L
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERM 122
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 123 SYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 178
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 179 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E+M G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D K
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIK 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 29/238 (12%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 4 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 61 FQNQTHAKRAYR-------ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 111
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 112 ---DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLK 166
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ DFGLA+ G ++ V+ Y Y APE ++ D++S GV++ E++ G
Sbjct: 167 ILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 12/159 (7%)
Query: 131 EVNFLGQLRHPNLVKLIGYCCE--DDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
E+ L +L HPN+VKL+ + +DH +V+E + +G + + PLS
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSEDQARFY 142
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
KG+ +LH + +I+RD K SN+L+ D K++DFG++ +G + +S V
Sbjct: 143 FQDLIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLSNTV- 198
Query: 249 GTYGYAAPEYVMTGH--LTARS-DVYSFGVVLLELLTGR 284
GT + APE + + ++ DV++ GV L + G+
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR-HPNL 143
+LGEG + V +N + AVK++ K+ EV L Q + + N+
Sbjct: 20 LLGEGAYAKVQGAVSLQNGK------EYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNI 73
Query: 144 VKLIGYCCEDDHRL-LVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNA 202
++LI + EDD R LV+E + GS+ H+ ++ A+R++ AA L FLH
Sbjct: 74 LELIEFF-EDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA--LDFLHT- 129
Query: 203 ERPVIYRDFKTSNILLDSDYT---AKLSDFGLAKAGPQGDE-THVSTRVM----GTYGYA 254
+ + +RD K NIL +S K+ DF L + T ++T + G+ Y
Sbjct: 130 -KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 255 APEY--VMTGHLT---ARSDVYSFGVVLLELLTG 283
APE V T T R D++S GVVL +L+G
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E+M G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D K
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIK 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 29/238 (12%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 4 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRP 60
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 61 FQNQTHAKRAYR-------ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 111
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 112 ---DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLK 166
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ DFGLA+ G ++ V+ Y Y APE ++ D++S GV++ E++ G
Sbjct: 167 ILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 25/183 (13%)
Query: 179 PLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQG 238
P++ + +F A+G+ FL + R I+RD NILL + K+ DFGLA+ +
Sbjct: 195 PITMEDLISYSFQVARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 239 DETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSL 298
+ + APE + + +SDV+S+GV+L E+ SL
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIF---------------SL 297
Query: 299 VDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVV 354
P + +M + RL +RA + + Y C ++PK RP +++V
Sbjct: 298 GGSPYPGV----QMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELV 353
Query: 355 ETL 357
E L
Sbjct: 354 EKL 356
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 23/208 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR------EWLTEVNFLGQLR 139
LG G F V K R L A K + K + R E EV+ L Q+
Sbjct: 20 LGSGQFAIVKK------CREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
HPN++ L +L+ E + G L + L +K ++ AT + G+ +L
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI--LDGVNYL 131
Query: 200 HNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
H + + + D K NI LLD + KL DFGLA G E + GT + A
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVA 186
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE V L +D++S GV+ LL+G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLL--VYEFMFRGSLENHLFR----KATVPLSW 182
++EVN L +L+HPN+V+ + + L V E+ G L + + + + + +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 183 ATRMMIAFGAA-KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDET 241
R+M A K + V++RD K +N+ LD KL DFGLA+ ++
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED- 171
Query: 242 HVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEL 280
+ +GT Y +PE + +SD++S G +L EL
Sbjct: 172 -FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 4 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 61 FQNQTHAKRAYR-------ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 111
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 112 ---DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLK 166
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ DFGLA+ G ++ V+ Y Y APE ++ D++S G ++ E++ G
Sbjct: 167 ILDFGLARTA--GTSFMMTPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 39/225 (17%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH---REWLTEVNFLGQLR-HP 141
LG+G +G V+K ID R G VAVK + + Q + E+ L +L H
Sbjct: 17 LGKGAYGIVWKS-IDR--RTGE---VVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 142 NLVKLIGYCCEDDHR--LLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
N+V L+ D+ R LV+++M + H +A + L + + + K + +L
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANI-LEPVHKQYVVYQLIKVIKYL 125
Query: 200 HNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQ-------------------GDE 240
H+ +++RD K SNILL+++ K++DFGL+++ D+
Sbjct: 126 HSG--GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 241 THVSTRVMGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLTGR 284
+ T + T Y APE ++ + T D++S G +L E+L G+
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG--HREWLTEVNFLGQLRHPNL 143
LG+G F V + V+V L A ++N + L H++ E L+HPN+
Sbjct: 19 LGKGAFSVVRRC-----VKV-LAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI 72
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+L E+ H L+++ + G L + + + A+ + A LH +
Sbjct: 73 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE----AVLHCHQ 128
Query: 204 RPVIYRDFKTSNILLDSDY---TAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
V++R+ K N+LL S KL+DFGLA +G E GT GY +PE +
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEG-EQQAWFGFAGTPGYLSPEVLR 186
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
D+++ GV+L LL G
Sbjct: 187 KDPYGKPVDLWACGVILYILLVG 209
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 21/203 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V++ E+ + G + AVK + E + E+ L P +V
Sbjct: 82 LGRGSFGEVHR---MEDKQTGFQ---CAVKKVRLEVFRAE-----ELMACAGLTSPRIVP 130
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA-KGLAFLHNAER 204
L G E + E + GSL + + +P R + G A +GL +LH+ R
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYLGQALEGLEYLHS--R 185
Query: 205 PVIYRDFKTSNILLDSDYT-AKLSDFGLA---KAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++ D K N+LL SD + A L DFG A + G + + GT + APE V+
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
A+ DV+S ++L +L G
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 76 ITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFL 135
I K+F +LG G F V+ V+ L A+K + K E+ L
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFL------VKQRLTGKLFALKCIKKSPAFRDSSLENEIAVL 60
Query: 136 GQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKG 195
+++H N+V L H LV + + G L + + + A+ ++
Sbjct: 61 KKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS--LVIQQVLSA 118
Query: 196 LAFLHNAERPVIYRDFKTSNILL---DSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYG 252
+ +LH E +++RD K N+L + + ++DFGL+K G + + GT G
Sbjct: 119 VKYLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPG 172
Query: 253 YAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
Y APE + + D +S GV+ LL G
Sbjct: 173 YVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW---LTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ + +E L E L + P
Sbjct: 49 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E+ G + +HL R + + P + +A ++++ F +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 156
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+++D K++DFGLAK V R GT Y A
Sbjct: 157 LHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTPEYLA 206
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V++ E+ + G + AVK + E + E+ L P +V
Sbjct: 101 LGRGSFGEVHR---MEDKQTGFQ---CAVKKVRLEVFRAE-----ELMACAGLTSPRIVP 149
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA-KGLAFLHNAER 204
L G E + E + GSL + + +P R + G A +GL +LH+ R
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRALYYLGQALEGLEYLHS--R 204
Query: 205 PVIYRDFKTSNILLDSDYT-AKLSDFGLA---KAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++ D K N+LL SD + A L DFG A + G + GT + APE V+
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
A+ DV+S ++L +L G
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 35/257 (13%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 4 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 61 FQNQTHAKRAYR-------ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 111
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 112 ---DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLK 166
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------ 279
+ DFGLA+ G + V+ Y Y APE ++ D++S G ++ E
Sbjct: 167 ILDFGLARTA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVCHKI 223
Query: 280 LLTGRKSVDKTRPSKEQ 296
L GR +D+ EQ
Sbjct: 224 LFPGRDYIDQWNKVIEQ 240
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPNL 143
LG+G F V + + GL+ A K++N + L ++ E +L+HPN+
Sbjct: 37 LGKGAFSVVRRCV---HKTTGLE---FAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+L E+ LV++ + G L + + + A+ + + +A+ H+
Sbjct: 91 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI--LESIAYCHS-- 146
Query: 204 RPVIYRDFKTSNILLDSDY---TAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++R+ K N+LL S KL+DFGLA + H GT GY +PE +
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLK 203
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
+ D+++ GV+L LL G
Sbjct: 204 KDPYSKPVDIWACGVILYILLVG 226
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 5 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 61
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 62 FQNQTHAKRAYR-------ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 112
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 113 ---DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLK 167
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ DFGLA+ G ++ V+ Y Y APE ++ D++S G ++ E++ G
Sbjct: 168 ILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
+F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 197 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 249 GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLND 308
+ APE + T +SDV+SFGV+L E+ SL P +
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKI 299
Query: 309 KRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPLQCAN 364
+ + RL+ +RA Y C P RP S++VE L L AN
Sbjct: 300 DEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 355
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 20/178 (11%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 151 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 202
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
++DFG AK T + GT Y APE +++ D ++ GV++ E+ G
Sbjct: 203 VTDFGFAKRVKGATWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 4 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 61 FQNQTHAKRAYR-------ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 111
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 112 ---DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLK 166
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ DFGLA+ G ++ V+ Y Y APE ++ D++S G ++ E++ G
Sbjct: 167 ILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
+F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 199 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 249 GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLND 308
+ APE + T +SDV+SFGV+L E+ SL P +
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKI 301
Query: 309 KRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPLQCAN 364
+ + RL+ +RA Y C P RP S++VE L L AN
Sbjct: 302 DEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 7/186 (3%)
Query: 131 EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRG-SLENHLFRKATVPLSWATRMMIA 189
E G+L+ P++V + + E D +L V + G L L R+ + A ++
Sbjct: 84 EARTAGRLQEPHVVPIHDFG-EIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQ 142
Query: 190 FGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMG 249
G+A A A +RD K NIL+ +D A L DFG+A A T + V G
Sbjct: 143 IGSALDAAHAAGA----THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-G 197
Query: 250 TYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDK 309
T Y APE H T R+D+Y+ VL E LTG + S + ++ A P+ +
Sbjct: 198 TLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTV 257
Query: 310 RKMLQI 315
R + +
Sbjct: 258 RPGIPV 263
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
+F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 204 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 249 GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLND 308
+ APE + T +SDV+SFGV+L E+ SL P +
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKI 306
Query: 309 KRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPLQCAN 364
+ + RL+ +RA Y C P RP S++VE L L AN
Sbjct: 307 DEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 362
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Query: 85 ILGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
++G+G F V + E + +K + VA K + GL + E + L+HP++
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVA-KFTSSPGLST-EDLKREASICHMLKHPHI 88
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+L+ D +V+EFM L + ++A ++ + + A + +
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 204 RPVIYRDFKTSNILLDSDYTA---KLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+I+RD K N+LL S + KL DFG+A G+ V+ +GT + APE V
Sbjct: 149 NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRVGTPHFMAPEVVK 206
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
DV+ GV+L LL+G
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 4 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 61 FQNQTHAKRAYR-------ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 111
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 112 ---DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLK 166
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ DFGLA+ G ++ V+ Y Y APE ++ D++S G ++ E++ G
Sbjct: 167 ILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 25/180 (13%)
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM 248
+F AKG+ FL A R I+RD NILL K+ DFGLA+ + +
Sbjct: 206 SFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 249 GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLND 308
+ APE + T +SDV+SFGV+L E+ SL P +
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF---------------SLGASPYPGVKI 308
Query: 309 KRKMLQIIDPRLENQYSVRAAQKACSLAYY----CLSQNPKARPLMSDVVETLEPLQCAN 364
+ + RL+ +RA Y C P RP S++VE L L AN
Sbjct: 309 DEEFCR----RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 364
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 71/169 (42%), Gaps = 28/169 (16%)
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
I K L L + +I+RD K SNILLD KL DFG++ Q ++ TR
Sbjct: 130 ITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKTRD 185
Query: 248 MGTYGYAAPEYVMTGH----LTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWAR 303
G Y APE + RSDV+S G+ L EL TGR +
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR----------------FPY 229
Query: 304 PKLNDK-RKMLQIID---PRLENQYSVRAAQKACSLAYYCLSQNPKARP 348
PK N ++ Q++ P+L N + + CL+++ RP
Sbjct: 230 PKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRP 278
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPNL 143
LG+G F V + + GL+ A K++N + L ++ E +L+HPN+
Sbjct: 13 LGKGAFSVVRRCV---HKTTGLE---FAAKIINTKKLSARDFQKLEREARICRKLQHPNI 66
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+L E+ LV++ + G L + + + A+ + + +A+ H+
Sbjct: 67 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI--LESIAYCHS-- 122
Query: 204 RPVIYRDFKTSNILLDSDY---TAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++R+ K N+LL S KL+DFGLA + H GT GY +PE +
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLK 179
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
+ D+++ GV+L LL G
Sbjct: 180 KDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPNL 143
LG+G F V + + GL+ A K++N + L ++ E +L+HPN+
Sbjct: 14 LGKGAFSVVRRCV---HKTTGLE---FAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+L E+ LV++ + G L + + + A+ + + +A+ H+
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI--LESIAYCHS-- 123
Query: 204 RPVIYRDFKTSNILLDSDY---TAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++R+ K N+LL S KL+DFGLA + H GT GY +PE +
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLK 180
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
+ D+++ GV+L LL G
Sbjct: 181 KDPYSKPVDIWACGVILYILLVG 203
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 113 AVKVLNKEGLQG--HREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLEN 170
A K++N + L H++ E L+H N+V+L E+ LV++ + G L
Sbjct: 33 AAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE 92
Query: 171 HLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY---TAKLS 227
+ + + A+ + A LH + V++RD K N+LL S KL+
Sbjct: 93 DIVAREYYSEADASHCIQQILEA----VLHCHQMGVVHRDLKPENLLLASKCKGAAVKLA 148
Query: 228 DFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
DFGLA QGD+ GT GY +PE + D+++ GV+L LL G
Sbjct: 149 DFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
I A+ + FLH+ + +++RD K SNI D K+ DFGL A Q +E
Sbjct: 169 IFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 248 MGTYG----------YAAPEYVMTGHLTARSDVYSFGVVLLELL 281
M Y Y +PE + + + + D++S G++L ELL
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
++ + F Y L E G + + + + S AVK++ K+ EV
Sbjct: 4 DSFSGRFEDVYQLQEDVLGEGAHARVQTCINL-ITSQEYAVKIIEKQPGHIRSRVFREVE 62
Query: 134 FLGQLR-HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA 192
L Q + H N+++LI + E+D LV+E M GS+ +H+ ++ A+ ++
Sbjct: 63 MLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS--VVVQDV 120
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYT---AKLSDFGLAKA-GPQGDETHVSTRVM 248
A L FLHN + + +RD K NIL + K+ DFGL GD + +ST +
Sbjct: 121 ASALDFLHN--KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 249 ----GTYGYAAPEYVMTGHLTA-----RSDVYSFGVVLLELLTG 283
G+ Y APE V A R D++S GV+L LL+G
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D K
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIK 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 4 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 61 FQNQTHAKRAYR-------ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 111
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 112 ---DANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLK 166
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ DFGLA+ G ++ V+ Y Y APE ++ D++S G ++ E++ G
Sbjct: 167 ILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 34/209 (16%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V V+ A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLA 197
LVKL Y +D+ L +V E++ G + +HL R + + P + +A ++++ F
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------E 155
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYA 254
+LH+ + +IYRD K N+L+D +++DFG AK V R GT Y
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 255 APEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE +++ D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 4 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 61 FQNQTHAKRAYR-------ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 111
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 112 ---DANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDATLK 166
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ DFGLA+ G ++ V+ Y Y APE ++ D++S G ++ E++ G
Sbjct: 167 ILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 4 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 61 FQNQTHAKRAYR-------ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 111
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 112 ---DANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDATLK 166
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ DFGLA+ G ++ V+ Y Y APE ++ D++S G ++ E++ G
Sbjct: 167 ILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 34/209 (16%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V V+ A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLA 197
LVKL Y +D+ L +V E++ G + +HL R + + P + +A ++++ F
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------E 155
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYA 254
+LH+ + +IYRD K N+L+D +++DFG AK V R GT Y
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 255 APEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE +++ D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 34/209 (16%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V V+ A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRL-LVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLA 197
LVKL Y +D+ L +V E++ G + +HL R + + P + +A ++++ F
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------E 155
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYA 254
+LH+ + +IYRD K N+L+D +++DFG AK V R GT Y
Sbjct: 156 YLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYL 205
Query: 255 APEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE +++ D ++ GV++ E+ G
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 4 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 61 FQNQTHAKRAYR-------ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 111
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 112 ---DANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLK 166
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ DFGLA+ G ++ V+ Y Y APE ++ D++S G ++ E++ G
Sbjct: 167 ILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V++ RV + L+K ++ E++ + QL HP L+
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK------NEISIMNQLHHPKLIN 112
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP 205
L + +L+ EF+ G L + + +S A + A +GL +H E
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMH--EHS 169
Query: 206 VIYRDFKTSNILLDSDY--TAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
+++ D K NI+ ++ + K+ DFGLA + V+T T +AAPE V
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREP 226
Query: 264 LTARSDVYSFGVVLLELLTG 283
+ +D+++ GV+ LL+G
Sbjct: 227 VGFYTDMWAIGVLGYVLLSG 246
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGH--REWLTEVNFLGQLRHPNL 143
LG+G F V + + GL+ A K++N + L ++ E +L+HPN+
Sbjct: 14 LGKGAFSVVRRCV---HKTTGLE---FAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+L E+ LV++ + G L + + + A+ + + +A+ H+
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI--LESIAYCHS-- 123
Query: 204 RPVIYRDFKTSNILLDSDY---TAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++R+ K N+LL S KL+DFGLA + H GT GY +PE +
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLK 180
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
+ D+++ GV+L LL G
Sbjct: 181 KDPYSKPVDIWACGVILYILLVG 203
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 35/257 (13%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 4 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 61 FQNQTHAKRAYR-------ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 111
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 112 ---DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLK 166
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------ 279
+ DFGLA+ G + V+ Y Y APE ++ D++S G ++ E
Sbjct: 167 ILDFGLARTA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 223
Query: 280 LLTGRKSVDKTRPSKEQ 296
L GR +D+ EQ
Sbjct: 224 LFPGRDYIDQWNKVIEQ 240
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTR---VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R + GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 27/240 (11%)
Query: 52 LEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLP 111
+ S+ + Y+ +A S F T+ K ++ +G G G V + + +G+
Sbjct: 1 MSKSKVDNQFYSVEVADSTF---TVLKRYQQLKPIGSGAQGIVCAAF---DTVLGIN--- 51
Query: 112 VAVKVLNKEGL-QGH-REWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFM 163
VAVK L++ Q H + E+ L + H N++ L+ E LV E M
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 164 FRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYT 223
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T
Sbjct: 112 -----DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCT 164
Query: 224 AKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
K+ DFGLA+ + T + T Y APE ++ A D++S G ++ EL+ G
Sbjct: 165 LKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG-LQGHREWLTEVNF-LGQLRHPNL 143
+G G G V+K + V +AVK + + G + ++ L +++ L P +
Sbjct: 33 MGSGTCGQVWKMRFRKTGHV------IAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI 86
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+ G + + E M G+ L ++ P+ + K L +L +
Sbjct: 87 VQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE-K 143
Query: 204 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGH 263
VI+RD K SNILLD KL DFG+ +G D+ R G Y APE +
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGI--SGRLVDD-KAKDRSAGCAAYMAPERIDPPD 200
Query: 264 LTA-----RSDVYSFGVVLLELLTGR 284
T R+DV+S G+ L+EL TG+
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 18/213 (8%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
+ ++ F + LG G VY+ + P A+KVL K + TE+
Sbjct: 49 DALSDFFEVESELGRGATSIVYR------CKQKGTQKPYALKVLKKT--VDKKIVRTEIG 100
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA 193
L +L HPN++KL LV E + G L + + K A + A
Sbjct: 101 VLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEA 160
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDS---DYTAKLSDFGLAKAGPQGDETHVSTRVMGT 250
+A+LH E +++RD K N+L + D K++DFGL+K + + V GT
Sbjct: 161 --VAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGT 213
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
GY APE + D++S G++ LL G
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 35/257 (13%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 9 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 65
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 66 FQNQTHAKRAYR-------ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 116
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 117 ---DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLK 171
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------ 279
+ DFGLA+ G ++ V+ Y Y APE ++ D++S G ++ E
Sbjct: 172 ILDFGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 228
Query: 280 LLTGRKSVDKTRPSKEQ 296
L GR +D+ EQ
Sbjct: 229 LFPGRDYIDQWNKVIEQ 245
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTR---VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R + GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E++ G + +HL R + + P + +A ++++ F +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 156
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+L+D +++DFG AK V R GT Y A
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 29/238 (12%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLP 111
S+++ Y+ I S F T+ K +++ +G G G V Y ++ NV + S P
Sbjct: 6 SKRDNNFYSVEIGDSTF---TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 62
Query: 112 VAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFR 165
+ K + E+ + + H N++ L+ E +V E M
Sbjct: 63 FQNQTHAKRAYR-------ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-- 113
Query: 166 GSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K
Sbjct: 114 ---DANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLK 168
Query: 226 LSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ DFGLA+ G + V+ Y Y APE ++ D++S G ++ E++ G
Sbjct: 169 ILDFGLARTA--GTSFMMVPFVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW---LTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ + +E L E L + P
Sbjct: 49 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E+ G + +HL R + + P + +A ++++ F +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 156
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+++D +++DFGLAK V R GT Y A
Sbjct: 157 LHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTPEYLA 206
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 130
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 182
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 183 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 283 G 283
G
Sbjct: 235 G 235
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG--HREWLTEVNFLGQLRHPNL 143
LG+G F V + + G + A K++N + L H++ E L+HPN+
Sbjct: 12 LGKGAFSVVRRCM---KIPTGQE---YAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+L E+ LV++ + G L + + + A+ + + L+
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG-- 123
Query: 204 RPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++RD K N+LL S KL+DFGLA QGD+ GT GY +PE +
Sbjct: 124 --IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLR 179
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
D+++ GV+L LL G
Sbjct: 180 KDPYGKPVDMWACGVILYILLVG 202
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 50 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E++ G + +HL R + + P + +A ++++ F +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 157
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 158 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPEYLAPEI 210
Query: 259 VMTGHLTARSDVYSFGVVLLELLTG 283
+++ D ++ GV++ E+ G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 61 LYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK- 119
Y + + +E+ + + + +G G +G V + R G K VA+K L +
Sbjct: 11 FYRQEVTKTAWEVRAVYRDLQP---VGSGAYGAVCSAV---DGRTGAK---VAIKKLYRP 61
Query: 120 --EGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDD------HRLLVYEFMFRGSLENH 171
L R + E+ L +RH N++ L+ D+ LV FM G+
Sbjct: 62 FQSELFAKRAY-RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGK 118
Query: 172 LFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGL 231
L + L + + KGL ++H A +I+RD K N+ ++ D K+ DFGL
Sbjct: 119 LMKHEK--LGEDRIQFLVYQMLKGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGL 174
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARSDVYSFGVVLLELLTGR 284
A+ V TR Y APE ++ T D++S G ++ E++TG+
Sbjct: 175 ARQADSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 86 LGEGGFGTVYKGYIDE-NVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLV 144
LG GG G V+ ++ + RV +K + VL Q + L E+ + +L H N+V
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKI-----VLTDP--QSVKHALREIKIIRRLDHDNIV 71
Query: 145 KL--------------IGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAF 190
K+ +G E + +V E+M L N L + PL + +
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQG---PLLEEHARLFMY 127
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDS-DYTAKLSDFGLAK-AGPQ-GDETHVSTRV 247
+GL ++H+A V++RD K +N+ +++ D K+ DFGLA+ P + H+S +
Sbjct: 128 QLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 248 MGTYGYAAPEYVMT-GHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKL 306
+ T Y +P +++ + T D+++ G + E+LTG+ ++ L+ + P +
Sbjct: 186 V-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244
Query: 307 N--DKRKMLQIIDPRLENQYS 325
+ D++++L +I + N +
Sbjct: 245 HEEDRQELLSVIPVYIRNDMT 265
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 50 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E++ G + +HL R + + P + +A ++++ F +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 157
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+L+D +++DFG AK V R GT Y A
Sbjct: 158 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E+ G + +HL R + + P + +A ++++ F +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 156
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+++D K++DFG AK V R GT Y A
Sbjct: 157 LHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E++ G + +HL R + + P + +A ++++ F +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 156
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+L+D +++DFG AK V R GT Y A
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 86 LGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNL 143
+G+G FG V+K + +V LK KVL + +G L E+ L L+H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALK------KVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 144 VKLIGYC---------CEDDHRLLVYEFM---FRGSLENHLFRKATVPLSWATRMMIAFG 191
V LI C C+ LV++F G L N L + + +M++
Sbjct: 80 VNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL--- 135
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA---GPQGDETHVSTRVM 248
GL ++H + +++RD K +N+L+ D KL+DFGLA+A RV+
Sbjct: 136 --NGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 249 GTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLT 282
T Y PE ++ D++ G ++ E+ T
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E++ G + +HL R + + P + +A ++++ F +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 156
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+L+D +++DFG AK V R GT Y A
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E++ G + +HL R + + P + +A ++++ F +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 156
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+L+D +++DFG AK V R GT Y A
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 35 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E++ G + +HL R + + P + +A ++++ F +
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 142
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEY 258
LH+ + +IYRD K N+L+D +++DFG AK T + GT Y APE
Sbjct: 143 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPEYLAPEI 195
Query: 259 VMTGHLTARSDVYSFGVVLLELLTG 283
+++ D ++ GV++ E+ G
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFAEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 57 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 116
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 117 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDEQGYIQ 168
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 169 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 220
Query: 283 G 283
G
Sbjct: 221 G 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LG G FG V++ ++ + G + AVK + E + + E+ L P +V
Sbjct: 80 LGRGSFGEVHR---MKDKQTGFQ---CAVKKVRLEVFR-----VEELVACAGLSSPRIVP 128
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA-KGLAFLHNAER 204
L G E + E + GSL + + +P R + G A +GL +LH R
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT--R 183
Query: 205 PVIYRDFKTSNILLDSDYT-AKLSDFGLA---KAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++ D K N+LL SD + A L DFG A + G + GT + APE VM
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
A+ D++S ++L +L G
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 182
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 183 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 283 G 283
G
Sbjct: 235 G 235
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQG--HREWLTEVNFLGQLRHPNL 143
LG+G F V + + G + A K++N + L H++ E L+HPN+
Sbjct: 12 LGKGAFSVVRRCM---KIPTGQE---YAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+L E+ LV++ + G L + + + A+ + + L+
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG-- 123
Query: 204 RPVIYRDFKTSNILLDSD---YTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++RD K N+LL S KL+DFGLA QGD+ GT GY +PE +
Sbjct: 124 --IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLR 179
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
D+++ GV+L LL G
Sbjct: 180 KDPYGKPVDMWACGVILYILLVG 202
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 150
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 151 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 202
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 203 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 283 G 283
G
Sbjct: 255 G 255
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 91 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 150
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 151 SHLRRIGRFXEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 202
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 203 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 283 G 283
G
Sbjct: 255 G 255
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 182
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 183 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 283 G 283
G
Sbjct: 235 G 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E+ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMF 130
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+++D K
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLMIDQQGYIK 182
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 183 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 283 G 283
G
Sbjct: 235 G 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 130
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 182
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 183 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 283 G 283
G
Sbjct: 235 G 235
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 40/238 (16%)
Query: 76 ITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK--EGLQGHREWLTEVN 133
I + +++G G +G V + Y RV VA+K + + E L + L E+
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRV------VAIKKILRVFEDLIDCKRILREIA 104
Query: 134 FLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIA---F 190
L +L H ++VK++ D E + + F+K + T + I +
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKFD-ELYVVLEIADSDFKKLFRTPVYLTELHIKTLLY 163
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA-------------GPQ 237
G+ ++H+A +++RD K +N L++ D + K+ DFGLA+ P+
Sbjct: 164 NLLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPR 221
Query: 238 GDETHVST---------RVMG---TYGYAAPEYV-MTGHLTARSDVYSFGVVLLELLT 282
D+ ++ T ++ G T Y APE + + + T DV+S G + ELL
Sbjct: 222 EDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 83
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 144 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 188
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 189 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 246 E----------------------EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTF 281
Query: 351 SDV 353
++
Sbjct: 282 EEI 284
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 63 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 122
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 123 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 174
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 175 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 283 G 283
G
Sbjct: 227 G 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 86 LGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNL 143
+G+G FG V+K + +V LK KVL + +G L E+ L L+H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALK------KVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 144 VKLIGYC---------CEDDHRLLVYEFM---FRGSLENHLFRKATVPLSWATRMMIAFG 191
V LI C C+ LV++F G L N L + + +M++
Sbjct: 80 VNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL--- 135
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA---GPQGDETHVSTRVM 248
GL ++H + +++RD K +N+L+ D KL+DFGLA+A RV+
Sbjct: 136 --NGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 249 GTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLT 282
T Y PE ++ D++ G ++ E+ T
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 86 LGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNL 143
+G+G FG V+K + +V LK KVL + +G L E+ L L+H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALK------KVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 144 VKLIGYC---------CEDDHRLLVYEFM---FRGSLENHLFRKATVPLSWATRMMIAFG 191
V LI C C+ LV++F G L N L + + +M++
Sbjct: 80 VNLIEICRTKASPYNRCKASI-YLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL--- 135
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA---GPQGDETHVSTRVM 248
GL ++H + +++RD K +N+L+ D KL+DFGLA+A RV+
Sbjct: 136 --NGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 249 GTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLT 282
T Y PE ++ D++ G ++ E+ T
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 65 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 124
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 125 SHLRRIGRFXEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 176
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 177 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 228
Query: 283 G 283
G
Sbjct: 229 G 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 86 LGEGGFGTVYKG-YIDENVRVGLKSLPVAVKVLNKEGLQGHR-EWLTEVNFLGQLRHPNL 143
+G+G FG V+K + +V LK KVL + +G L E+ L L+H N+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALK------KVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 144 VKLIGYC---------CEDDHRLLVYEFM---FRGSLENHLFRKATVPLSWATRMMIAFG 191
V LI C C+ LV++F G L N L + + +M++
Sbjct: 79 VNLIEICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL--- 134
Query: 192 AAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA---GPQGDETHVSTRVM 248
GL ++H + +++RD K +N+L+ D KL+DFGLA+A RV+
Sbjct: 135 --NGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 249 GTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELLT 282
T Y PE ++ D++ G ++ E+ T
Sbjct: 191 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E+ G + +HL R + P + +A ++++ F +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF------EY 156
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+++D K++DFG AK V R GT Y A
Sbjct: 157 LHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+++D +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLIIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 70
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 131 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 175
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 176 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 233 E----------------------EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTF 268
Query: 351 SDV 353
++
Sbjct: 269 EEI 271
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 131 EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAF 190
E+ + LRHP LV L +D+ +++YEFM G L + + +S +
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMR 262
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA--KLSDFGLAKAGPQGDETHVSTRVM 248
KGL +H E ++ D K NI+ + + KL DFGL V+T
Sbjct: 263 QVCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--- 317
Query: 249 GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
GT +AAPE + +D++S GV+ LL+G
Sbjct: 318 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E++ G + +HL R + P + +A ++++ F +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF------EY 156
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+L+D +++DFG AK V R GT Y A
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 27/237 (11%)
Query: 55 SRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAV 114
S ++ Y+ +A S F T+ K ++ +G G G V + + +G+ VAV
Sbjct: 2 SHMDSQFYSVQVADSTF---TVLKRYQQLKPIGSGAQGIVCAAF---DTVLGIN---VAV 52
Query: 115 KVLNKEGL-QGH-REWLTEVNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRG 166
K L++ Q H + E+ L + H N++ L+ E LV E M
Sbjct: 53 KKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM--- 109
Query: 167 SLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKL 226
+ +L + + L + + G+ LH+A +I+RD K SNI++ SD T K+
Sbjct: 110 --DANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKI 165
Query: 227 SDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
DFGLA+ + T + T Y APE ++ D++S G ++ EL+ G
Sbjct: 166 LDFGLART---ASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 50 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E++ G + +HL R + P + +A ++++ F +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF------EY 157
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+L+D +++DFG AK V R GT Y A
Sbjct: 158 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ ++
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E++ G + +HL R + P + +A ++++ F +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF------EY 156
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+L+D +++DFG AK V R GT Y A
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 50 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 103
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 104 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 163
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 164 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 208
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 209 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 265
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 266 E----------------------EII--RGQVFFRQRVSXECQHLIRWCLALRPSDRPTF 301
Query: 351 SDV 353
++
Sbjct: 302 EEI 304
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 71
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 132 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 176
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 177 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 234 E----------------------EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTF 269
Query: 351 SDV 353
++
Sbjct: 270 EEI 272
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 71
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 132 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 176
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 177 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 234 E----------------------EII--RGQVFFRQRVSXECQHLIRWCLALRPSDRPTF 269
Query: 351 SDV 353
++
Sbjct: 270 EEI 272
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 98
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 159 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 203
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 204 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 261 E----------------------EII--RGQVFFRQRVSXECQHLIRWCLALRPSDRPTF 296
Query: 351 SDV 353
++
Sbjct: 297 EEI 299
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 70
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 71 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 131 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 175
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 176 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 233 E----------------------EII--RGQVFFRQRVSXECQHLIRWCLALRPSDRPTF 268
Query: 351 SDV 353
++
Sbjct: 269 EEI 271
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 56
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 117 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 161
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 162 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 219 E----------------------EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTF 254
Query: 351 SDV 353
++
Sbjct: 255 EEI 257
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 71
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 72 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 132 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 176
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 177 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 234 E----------------------EII--RGQVFFRQRVSXECQHLIRWCLALRPXDRPTF 269
Query: 351 SDV 353
++
Sbjct: 270 EEI 272
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 90
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 91 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 150
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 151 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 195
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 196 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 252
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 253 E----------------------EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTF 288
Query: 351 SDV 353
++
Sbjct: 289 EEI 291
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 56
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 117 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 161
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 162 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 219 E----------------------EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTF 254
Query: 351 SDV 353
++
Sbjct: 255 EEI 257
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 98
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 99 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 159 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 203
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 204 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 261 E----------------------EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTF 296
Query: 351 SDV 353
++
Sbjct: 297 EEI 299
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 55
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 56 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 115
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 116 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 160
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 161 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 218 E----------------------EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTF 253
Query: 351 SDV 353
++
Sbjct: 254 EEI 256
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 131 EVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAF 190
E+ + LRHP LV L +D+ +++YEFM G L + + +S +
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMR 156
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA--KLSDFGLAKAGPQGDETHVSTRVM 248
KGL +H E ++ D K NI+ + + KL DFGL V+T
Sbjct: 157 QVCKGLCHMH--ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--- 211
Query: 249 GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
GT +AAPE + +D++S GV+ LL+G
Sbjct: 212 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 56
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 57 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 117 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 161
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 162 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 219 E----------------------EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTF 254
Query: 351 SDV 353
++
Sbjct: 255 EEI 257
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 55
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 56 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL 115
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 116 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 160
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 161 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 218 E----------------------EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTF 253
Query: 351 SDV 353
++
Sbjct: 254 EEI 256
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 49 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
LVKL ++ + +V E+ G + +HL R + + P + +A ++++ F +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 156
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+++D +++DFG AK V R GT Y A
Sbjct: 157 LHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLA 206
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 63 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMF 122
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 123 SHLRRIGRFXEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 174
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 175 VTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 226
Query: 283 G 283
G
Sbjct: 227 G 227
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G G FG V++ ++ + G + AVK + E + + E+ L P +V
Sbjct: 66 VGRGSFGEVHR---MKDKQTGFQ---CAVKKVRLEVFR-----VEELVACAGLSSPRIVP 114
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA-KGLAFLHNAER 204
L G E + E + GSL + + +P R + G A +GL +LH R
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT--R 169
Query: 205 PVIYRDFKTSNILLDSDYT-AKLSDFGLA---KAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++ D K N+LL SD + A L DFG A + G + GT + APE VM
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
A+ D++S ++L +L G
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 54
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 55 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 114
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 115 ARS------------FFWQVLEAVRHCHNC--GVLHRDIKDENILIDLNRGELKLIDFG- 159
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G
Sbjct: 160 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI----- 211
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
P +D+ +II R + + R + + L +CL+ P RP
Sbjct: 212 -------------PFEHDE----EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTF 252
Query: 351 SDV 353
++
Sbjct: 253 EEI 255
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 45/233 (19%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 84
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 145 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 189
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTG 283
+G +T V T GT Y+ PE++ RS V+S G++L +++ G
Sbjct: 190 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 45/233 (19%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 83
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 144 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 188
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTG 283
+G +T V T GT Y+ PE++ RS V+S G++L +++ G
Sbjct: 189 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 125/303 (41%), Gaps = 69/303 (22%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 25 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 78
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 79 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 138
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 139 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 183
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKT 290
+G +T V T GT Y+ PE++ RS V+S G++L +++ G +
Sbjct: 184 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 240
Query: 291 RPSKEQSLVDWARPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLM 350
+II R + + R + + L +CL+ P RP
Sbjct: 241 E----------------------EII--RGQVFFRQRVSXECQHLIRWCLALRPSDRPTF 276
Query: 351 SDV 353
++
Sbjct: 277 EEI 279
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 45/233 (19%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 84
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 145 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 189
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTG 283
+G +T V T GT Y+ PE++ RS V+S G++L +++ G
Sbjct: 190 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 45/233 (19%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 83
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 144 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 188
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTG 283
+G +T V T GT Y+ PE++ RS V+S G++L +++ G
Sbjct: 189 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 75 TITKSFRSDYILGEGGFGTV---YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
T+ K +++ +G G G V Y ++ NV + S P + K + E
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-------E 67
Query: 132 VNFLGQLRHPNLVKLIGYCC------EDDHRLLVYEFMFRGSLENHLFRKATVPLSWATR 185
+ + + H N++ L+ E +V E M + +L + + L
Sbjct: 68 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-----DANLCQVIQMELDHERM 122
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVST 245
+ + G+ LH+A +I+RD K SNI++ SD T K+ DFGLA+ G ++
Sbjct: 123 SYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 178
Query: 246 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE------LLTGRKSVDKTRPSKEQ 296
V+ Y Y APE ++ D++S G ++ E L GR +D+ EQ
Sbjct: 179 YVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 45/233 (19%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 84
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 145 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 189
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTG 283
+G +T V T GT Y+ PE++ RS V+S G++L +++ G
Sbjct: 190 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 45/233 (19%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 84
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 85 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 145 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 189
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTG 283
+G +T V T GT Y+ PE++ RS V+S G++L +++ G
Sbjct: 190 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 45/233 (19%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT- 130
E E + ++ +LG GGFG+VY G +RV +LPVA+K + K+ + E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNG 83
Query: 131 -----EVNFLGQLR--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHL 172
EV L ++ +++L+ + D +L+ E F F RG+L+ L
Sbjct: 84 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 173 FRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGL 231
R + + + HN V++RD K NIL+D + KL DFG
Sbjct: 144 ARS------------FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG- 188
Query: 232 AKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTG 283
+G +T V T GT Y+ PE++ RS V+S G++L +++ G
Sbjct: 189 --SGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
+G G FG V++ ++ + G + AVK + E + + E+ L P +V
Sbjct: 82 VGRGSFGEVHR---MKDKQTGFQ---CAVKKVRLEVFR-----VEELVACAGLSSPRIVP 130
Query: 146 LIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAA-KGLAFLHNAER 204
L G E + E + GSL + + +P R + G A +GL +LH R
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT--R 185
Query: 205 PVIYRDFKTSNILLDSDYT-AKLSDFGLA---KAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+++ D K N+LL SD + A L DFG A + G + GT + APE VM
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 245
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
A+ D++S ++L +L G
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 50 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
L KL ++ + +V E+ G + +HL R + + P + +A ++++ F +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 157
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+++D K++DFG AK V R GT Y A
Sbjct: 158 LHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 74 ETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVN 133
++ + F Y L E G + + + + S AVK++ K+ EV
Sbjct: 4 DSFSGRFEDVYQLQEDVLGEGAHARVQTCINL-ITSQEYAVKIIEKQPGHIRSRVFREVE 62
Query: 134 FLGQLR-HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGA 192
L Q + H N+++LI + E+D LV+E M GS+ +H+ ++ A+ ++
Sbjct: 63 MLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS--VVVQDV 120
Query: 193 AKGLAFLHNAERPVIYRDFKTSNILLDSDYT---AKLSDFGLAKA-GPQGDETHVSTRVM 248
A L FLHN + + +RD K NIL + K+ DF L GD + +ST +
Sbjct: 121 ASALDFLHN--KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 249 ----GTYGYAAPEYVMTGHLTA-----RSDVYSFGVVLLELLTG 283
G+ Y APE V A R D++S GV+L LL+G
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 50 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
L KL ++ + +V E+ G + +HL R + + P + +A ++++ F +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF------EY 157
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+++D K++DFG AK V R GT Y A
Sbjct: 158 LHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y AP +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 23/208 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT------EVNFLGQLR 139
LG G F V K R L A K + K + R ++ EV+ L Q+
Sbjct: 20 LGSGQFAIVKK------CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
H N++ L +L+ E + G L + L +K ++ AT + G+ +L
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI--LDGVNYL 131
Query: 200 HNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
H + + + D K NI LLD + KL DFGLA G E + GT + A
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVA 186
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE V L +D++S GV+ LL+G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 112/281 (39%), Gaps = 34/281 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLN--KEGLQGHREWLTEVNFLGQLRHPNL 143
L E G ++KG N + VKVL + R++ E L HPN+
Sbjct: 18 LNENHSGELWKGRWQGND--------IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 144 VKLIGYCCEDD--HRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHN 201
+ ++G C H L+ + GSL N L + + + A A+G AFLH
Sbjct: 70 LPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT 129
Query: 202 AERPVIYRD-FKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
E P+I R + ++ +D D TA++S + + + V PE
Sbjct: 130 LE-PLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPE--D 186
Query: 261 TGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQIIDPRL 320
T +A D +SF V+L EL+T +E D + ++ K L+ + P +
Sbjct: 187 TNRRSA--DXWSFAVLLWELVT-----------REVPFADLSNXEIGXK-VALEGLRPTI 232
Query: 321 ENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ 361
S ++ L C +++P RP +V LE Q
Sbjct: 233 PPGISPHVSK----LXKICXNEDPAKRPKFDXIVPILEKXQ 269
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
Query: 109 SLPVAVKVLNKEGLQGHREWLTEVNFLGQL-RHPNLVKLIGYCCEDDHRLLVYEFMFRGS 167
++ AVK+++K R+ E+ L + +HPN++ L + + +V E M G
Sbjct: 47 NMEFAVKIIDK----SKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102
Query: 168 LENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY----T 223
L + + R+ A+ ++ F K + +LH + V++RD K SNIL + +
Sbjct: 103 LLDKILRQKFFSEREASAVL--FTITKTVEYLH--AQGVVHRDLKPSNILYVDESGNPES 158
Query: 224 AKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
++ DFG AK E + T + APE + A D++S GV+L +LTG
Sbjct: 159 IRICDFGFAKQ--LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E + P LVKL ++ + +V E+ G +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMF 130
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D K
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIK 182
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT Y APE +++ D ++ GV++ E+
Sbjct: 183 VADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 234
Query: 283 G 283
G
Sbjct: 235 G 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 32/208 (15%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEG---LQGHREWLTEVNFLGQLRHPN 142
LG G FG V + +++ G A+K+L+K+ L+ L E L + P
Sbjct: 50 LGTGSFGRVM---LVKHMETGNH---YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 143 LVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR--KATVPLS--WATRMMIAFGAAKGLAF 198
L KL ++ + +V E+ G + +HL R + P + +A ++++ F +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF------EY 157
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVM---GTYGYAA 255
LH+ + +IYRD K N+++D K++DFG AK V R GT Y A
Sbjct: 158 LHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLA 207
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE +++ D ++ GV++ E+ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 116/275 (42%), Gaps = 46/275 (16%)
Query: 80 FRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR 139
F +LG+G FG V K R L S A+K + + + L+EV L L
Sbjct: 8 FEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLN 60
Query: 140 HP-------------NLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRM 186
H N VK + + + E+ G+L + L +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQQRDEYW 119
Query: 187 MIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQG------DE 240
+ + L+++H+ + +I+RD K NI +D K+ DFGLAK + D
Sbjct: 120 RLFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 241 THVS------TRVMGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELL----TGRKSVDK 289
++ T +GT Y A E + TGH + D+YS G++ E++ TG + V+
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNI 237
Query: 290 TRPSKEQSLV---DWARPKLNDKRKMLQII---DP 318
+ + S+ D+ K+ ++K+++++ DP
Sbjct: 238 LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDP 272
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 23/208 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT------EVNFLGQLR 139
LG G F V K R L A K + K + R ++ EV+ L Q+
Sbjct: 20 LGSGQFAIVKK------CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
H N++ L +L+ E + G L + L +K ++ AT + G+ +L
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI--LDGVNYL 131
Query: 200 HNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
H + + + D K NI LLD + KL DFGLA G E + GT + A
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVA 186
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE V L +D++S GV+ LL+G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 88/208 (42%), Gaps = 23/208 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHR------EWLTEVNFLGQLR 139
LG G F V K R L A K + K + R E EV+ L Q+
Sbjct: 20 LGSGQFAIVKK------CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
H N++ L +L+ E + G L + L +K ++ AT + G+ +L
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI--LDGVNYL 131
Query: 200 HNAERPVIYRDFKTSNI-LLDSDY---TAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
H + + + D K NI LLD + KL DFGLA G E + GT + A
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVA 186
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE V L +D++S GV+ LL+G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 23/208 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT------EVNFLGQLR 139
LG G F V K R L A K + K + R ++ EV+ L Q+
Sbjct: 20 LGSGQFAIVKK------CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
H N++ L +L+ E + G L + L +K ++ AT + G+ +L
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI--LDGVNYL 131
Query: 200 HNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
H + + + D K NI LLD + KL DFGLA G E + GT + A
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVA 186
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE V L +D++S GV+ LL+G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 113/286 (39%), Gaps = 39/286 (13%)
Query: 71 FELETITKSFRSDYI--LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREW 128
++ + S R D++ +G G FG + +R L VAVK + + G
Sbjct: 11 LDMPIMHDSDRYDFVKDIGSGNFG------VARLMRDKLTKELVAVKYIER-GAAIDENV 63
Query: 129 LTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMI 188
E+ LRHPN+V+ H ++ E+ G L + A
Sbjct: 64 QREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ 123
Query: 189 AFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTA--KLSDFGLAKAGPQGDETHVSTR 246
G+++ H+ + + +RD K N LLD K+ DFG +K+ + +
Sbjct: 124 QL--LSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-- 177
Query: 247 VMGTYGYAAPEYVMTGHLTAR-SDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPK 305
+GT Y APE ++ + +DV+S GV L +L G + D P+
Sbjct: 178 -VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE-----------DPEEPR 225
Query: 306 LNDKRKMLQIIDPRLENQYS----VRAAQKACSLAYYCLSQNPKAR 347
D RK +Q I L +YS +R + + C L +P R
Sbjct: 226 --DYRKTIQRI---LSVKYSIPDDIRISPECCHLISRIFVADPATR 266
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 89/208 (42%), Gaps = 23/208 (11%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT------EVNFLGQLR 139
LG G F V K R L A K + K + R ++ EV+ L Q+
Sbjct: 20 LGSGQFAIVKK------CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFL 199
H N++ L +L+ E + G L + L +K ++ AT + G+ +L
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI--LDGVNYL 131
Query: 200 HNAERPVIYRDFKTSNI-LLDSDYTA---KLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
H + + + D K NI LLD + KL DFGLA G E + GT + A
Sbjct: 132 HT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVA 186
Query: 256 PEYVMTGHLTARSDVYSFGVVLLELLTG 283
PE V L +D++S GV+ LL+G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 26/181 (14%)
Query: 113 AVKVLNKEG---LQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 169
A+K+L+K+ L+ L E L + P LVKL ++ + +V E++ G +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129
Query: 170 NHLFR--KATVPLS--WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK 225
+HL R + + P + +A ++++ F +LH+ + +IYRD K N+L+D +
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTF------EYLHSLD--LIYRDLKPENLLIDQQGYIQ 181
Query: 226 LSDFGLAKAGPQGDETHVSTRVM---GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
++DFG AK V R GT APE +++ D ++ GV++ E+
Sbjct: 182 VTDFGFAK--------RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA 233
Query: 283 G 283
G
Sbjct: 234 G 234
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 116/279 (41%), Gaps = 47/279 (16%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT------EVNFLGQL 138
+LG GGFG+VY G +RV +LPVA+K + K+ + E EV L ++
Sbjct: 11 LLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 139 R--HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGL 196
+++L+ + D +L+ E R LF T + + +F
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 197 AFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
A H V++RD K NIL+D + KL DFG +G +T V T GT Y+
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VYTDFDGTRVYSP 177
Query: 256 PEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKMLQ 314
PE++ RS V+S G++L +++ G + +
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------------------E 215
Query: 315 IIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
II R + + R + + L +CL+ P RP ++
Sbjct: 216 II--RGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 69/290 (23%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT------EVNFLGQL 138
+LG GGFG+VY G +RV +LPVA+K + K+ + E EV L ++
Sbjct: 11 LLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 139 R--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHLFRKATVPLSWATR 185
+++L+ + D +L+ E F F RG+L+ L R
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS---------- 114
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGLAKAGPQGDETHVS 244
+ + + HN V++RD K NIL+D + KL DFG +G +T V
Sbjct: 115 --FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VY 166
Query: 245 TRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWAR 303
T GT Y+ PE++ RS V+S G++L +++ G
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI------------------ 208
Query: 304 PKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDV 353
P +D+ +II R + + R + + L +CL+ P RP ++
Sbjct: 209 PFEHDE----EII--RGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 76 ITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFL 135
I + + + +G G +G V K + + R+ A K + K ++ + E+ +
Sbjct: 7 INQYYTLENTIGRGSWGEV-KIAVQKGTRIRR-----AAKKIPKYFVEDVDRFKQEIEIM 60
Query: 136 GQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKG 195
L HPN+++L ++ LV E G L + K S A R+M +A
Sbjct: 61 KSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA-- 118
Query: 196 LAFLHNAERPVIYRDFKTSNILL--DS-DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYG 252
+A+ H V +RD K N L DS D KL DFGLA G + T+V GT
Sbjct: 119 VAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKV-GTPY 173
Query: 253 YAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
Y +P+ V+ G D +S GV++ LL G
Sbjct: 174 YVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 122/287 (42%), Gaps = 70/287 (24%)
Query: 80 FRSDYILGEGGFGTVYKG---------------YIDENVRVGLKSLPVAVKVLNKEGLQG 124
F +LG+G FG V K + +E + L + + + ++ ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 125 HREWLTEVNFLGQL----RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH------LFR 174
+ WL NF+ + + L + YC ++R L Y+ + +L LFR
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYC---ENRTL-YDLIHSENLNQQRDEYWRLFR 123
Query: 175 KATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA 234
+ + L+++H+ + +I+RD K NI +D K+ DFGLAK
Sbjct: 124 QIL----------------EALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKN 165
Query: 235 GPQG------DETHVS------TRVMGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELL 281
+ D ++ T +GT Y A E + TGH + D+YS G++ E++
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
Query: 282 ----TGRKSVDKTRPSKEQSLV---DWARPKLNDKRKMLQII---DP 318
TG + V+ + + S+ D+ K+ ++K+++++ DP
Sbjct: 226 YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDP 272
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 76 ITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFL 135
I + + + +G G +G V K + + R+ A K + K ++ + E+ +
Sbjct: 24 INQYYTLENTIGRGSWGEV-KIAVQKGTRIRR-----AAKKIPKYFVEDVDRFKQEIEIM 77
Query: 136 GQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKG 195
L HPN+++L ++ LV E G L + K S A R+M +A
Sbjct: 78 KSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA-- 135
Query: 196 LAFLHNAERPVIYRDFKTSNILL--DS-DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYG 252
+A+ H V +RD K N L DS D KL DFGLA G + T+V GT
Sbjct: 136 VAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKV-GTPY 190
Query: 253 YAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
Y +P+ V+ G D +S GV++ LL G
Sbjct: 191 YVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 117/297 (39%), Gaps = 49/297 (16%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVK 145
LGEGGF Y+D + ++L E Q E E + HPN+++
Sbjct: 37 LGEGGFS-----YVDLVEGLHDGHFYALKRILCHEQ-QDREEAQREADMHRLFNHPNILR 90
Query: 146 LIGYCCED----DHRLLVYEFMFRGSLENHLFR---KATVPLSWATRMMIAFGAAKGLAF 198
L+ YC + L+ F RG+L N + R K L+ + + G +GL
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF-LTEDQILWLLLGICRGLEA 149
Query: 199 LHNAERPVIYRDFKTSNILLDSDYTAKLSDFG---LAKAGPQGDETHVSTRVMG----TY 251
+H + +RD K +NILL + L D G A +G ++ + T
Sbjct: 150 IH--AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 252 GYAAPE-YVMTGH--LTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLND 308
Y APE + + H + R+DV+S G VL ++ G D +
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS------------ 255
Query: 309 KRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQ----NPKARPLMSDVVETLEPLQ 361
+ ++NQ S+ + + S + L+ +P RP + ++ LE LQ
Sbjct: 256 -------VALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 113 AVKVLNKEGLQGHREWLTEVNFLGQL-RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 171
AVKV++K R+ E+ L + +HPN++ L + H LV E M G L +
Sbjct: 56 AVKVIDK----SKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDK 111
Query: 172 LFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY----TAKLS 227
+ R+ A+ ++ G K + +LH+ + V++RD K SNIL + ++
Sbjct: 112 ILRQKFFSEREASFVLHTIG--KTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRIC 167
Query: 228 DFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
DFG AK E + T + APE + D++S G++L +L G
Sbjct: 168 DFGFAKQ--LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 45/220 (20%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT------EVNFLGQL 138
+LG GGFG+VY G +RV +LPVA+K + K+ + E EV L ++
Sbjct: 11 LLGSGGFGSVYSG-----IRVS-DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 139 R--HPNLVKLIGYCCEDDHRLLVYE--------FMF---RGSLENHLFRKATVPLSWATR 185
+++L+ + D +L+ E F F RG+L+ L R
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS---------- 114
Query: 186 MMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY-TAKLSDFGLAKAGPQGDETHVS 244
+ + + HN V++RD K NIL+D + KL DFG +G +T V
Sbjct: 115 --FFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDT-VY 166
Query: 245 TRVMGTYGYAAPEYVMTGHLTARS-DVYSFGVVLLELLTG 283
T GT Y+ PE++ RS V+S G++L +++ G
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 15/180 (8%)
Query: 109 SLPVAVKVLNKEGLQGHREWLTEVNFLGQL-RHPNLVKLIGYCCEDDHRLLVYEFMFRGS 167
++ AVKV++K R+ E+ L + +HPN++ L + H LV E M G
Sbjct: 52 NMEYAVKVIDK----SKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGE 107
Query: 168 LENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY----T 223
L + + R+ A+ ++ G K + +LH+ + V++RD K SNIL +
Sbjct: 108 LLDKILRQKFFSEREASFVLHTIG--KTVEYLHS--QGVVHRDLKPSNILYVDESGNPEC 163
Query: 224 AKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
++ DFG AK E + T + APE + D++S G++L +L G
Sbjct: 164 LRICDFGFAKQ--LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP--- 141
++G+G FG V K Y D V VA+K++ E + HR+ E+ L LR
Sbjct: 104 VIGKGSFGQVVKAY-DHKVHQH-----VALKMVRNEK-RFHRQAAEEIRILEHLRKQDKD 156
Query: 142 ---NLVKLIGYCCEDDHRLLVYEFMFRGSLE---NHLFRKATVPLSWATRMMIAFGAAKG 195
N++ ++ +H + +E + E + F+ ++PL A +
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK----FAHSILQC 212
Query: 196 LAFLHNAERPVIYRDFKTSNILLDSDYTA--KLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L LH +I+ D K NILL + K+ DFG + Q T + +R Y
Sbjct: 213 LDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----Y 265
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE ++ D++S G +L ELLTG
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP--- 141
++G+G FG V K Y D V VA+K++ E + HR+ E+ L LR
Sbjct: 104 VIGKGSFGQVVKAY-DHKVHQH-----VALKMVRNEK-RFHRQAAEEIRILEHLRKQDKD 156
Query: 142 ---NLVKLIGYCCEDDHRLLVYEFMFRGSLE---NHLFRKATVPLSWATRMMIAFGAAKG 195
N++ ++ +H + +E + E + F+ ++PL A +
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK----FAHSILQC 212
Query: 196 LAFLHNAERPVIYRDFKTSNILLDSDYTA--KLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L LH +I+ D K NILL + K+ DFG + Q T + +R Y
Sbjct: 213 LDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----Y 265
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE ++ D++S G +L ELLTG
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 125 HREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL---ENHLF---RKATV 178
+ ++ E+ + +++ + G D ++YE+M S+ + + F + T
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 179 PLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQG 238
+ I +++HN E+ + +RD K SNIL+D + KLSDFG +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFGES------ 199
Query: 239 DETHVSTRVM---GTYGYAAPEYVM--TGHLTARSDVYSFGVVL 277
E V ++ GTY + PE+ + + A+ D++S G+ L
Sbjct: 200 -EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 22/228 (9%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLK------SLPVAVKVLNKEGLQGH 125
EL + + + G +G V G E + V +K S V +L+ L
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC-- 73
Query: 126 REWLTEVNFLGQLRHPNLVKL----IGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLS 181
+ L E+ L HPN++ L + + H+L + + R L + + +S
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQ-VIHDQRIVIS 132
Query: 182 WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG-PQGDE 240
+ GL LH A V++RD NILL + + DF LA+ ++
Sbjct: 133 PQHIQYFMYHILLGLHVLHEA--GVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 241 THVSTRVMGTYGYAAPEYVMTGH-LTARSDVYSFGVVLLELLTGRKSV 287
TH T Y APE VM T D++S G V+ E+ RK++
Sbjct: 191 THYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 22/228 (9%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLK------SLPVAVKVLNKEGLQGH 125
EL + + + G +G V G E + V +K S V +L+ L
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC-- 73
Query: 126 REWLTEVNFLGQLRHPNLVKL----IGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLS 181
+ L E+ L HPN++ L + + H+L + + R L + + +S
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQ-VIHDQRIVIS 132
Query: 182 WATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG-PQGDE 240
+ GL LH A V++RD NILL + + DF LA+ ++
Sbjct: 133 PQHIQYFMYHILLGLHVLHEA--GVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 241 THVSTRVMGTYGYAAPEYVMTGH-LTARSDVYSFGVVLLELLTGRKSV 287
TH T Y APE VM T D++S G V+ E+ RK++
Sbjct: 191 THYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 85 ILGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
++G+G F V + E + +K + VA K + GL + E + L+HP++
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVA-KFTSSPGLST-EDLKREASICHMLKHPHI 90
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+L+ D +V+EFM L + ++A ++ + + A + +
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 150
Query: 204 RPVIYRDFKTSNILLDSDYTA---KLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+I+RD K +LL S + KL FG+A G+ V+ +GT + APE V
Sbjct: 151 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPHFMAPEVVK 208
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
DV+ GV+L LL+G
Sbjct: 209 REPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 85 ILGEGGFGTVYKGYIDEN-VRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNL 143
++G+G F V + E + +K + VA K + GL + E + L+HP++
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVA-KFTSSPGLST-EDLKREASICHMLKHPHI 88
Query: 144 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE 203
V+L+ D +V+EFM L + ++A ++ + + A + +
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 204 RPVIYRDFKTSNILLDSDYTA---KLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVM 260
+I+RD K +LL S + KL FG+A G+ V+ +GT + APE V
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTPHFMAPEVVK 206
Query: 261 TGHLTARSDVYSFGVVLLELLTG 283
DV+ GV+L LL+G
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 113 AVKVLNKEGLQGHREWLTEVNFLGQL-RHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 171
AVK+++K R+ E+ L + +HPN++ L + + +V E G L +
Sbjct: 51 AVKIIDK----SKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDK 106
Query: 172 LFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDY----TAKLS 227
+ R+ A+ ++ F K + +LH + V++RD K SNIL + + ++
Sbjct: 107 ILRQKFFSEREASAVL--FTITKTVEYLH--AQGVVHRDLKPSNILYVDESGNPESIRIC 162
Query: 228 DFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
DFG AK E + T + APE + A D++S GV+L LTG
Sbjct: 163 DFGFAKQ--LRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
IA K L LH ++ VI+RD K SN+L+++ K+ DFG+ +G D T
Sbjct: 158 IAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGI--SGYLVDSV-AKTID 213
Query: 248 MGTYGYAAPEYV-----MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWA 302
G Y APE + G+ + +SD++S G+ ++EL R D W
Sbjct: 214 AGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYDS-----------WG 261
Query: 303 RPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE 355
P +++++ P+L + + + CL +N K RP ++++
Sbjct: 262 TP-FQQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 106/254 (41%), Gaps = 57/254 (22%)
Query: 82 SDYILGEGGFGTV-YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR- 139
S+ ILG G GTV ++G + PVAVK + + L E+ L +
Sbjct: 19 SEKILGYGSSGTVVFQG--------SFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDD 67
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMF------------RGSLENHLFRKATVPLSWATRMM 187
HPN+++ YC E R L S EN +K P+S ++
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 124
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLD--SDYTAK-----------LSDFGLAKA 234
A G+A LH+ + +I+RD K NIL+ S +TA +SDFGL K
Sbjct: 125 -----ASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 235 GPQGDETHVST--RVMGTYGYAAPEYVMTGH-------LTARSDVYSFGVVLLELLTGRK 285
G + + GT G+ APE + + LT D++S G V +L+ K
Sbjct: 178 LDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Query: 286 SVDKTRPSKEQSLV 299
+ S+E +++
Sbjct: 238 HPFGDKYSRESNII 251
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 53/250 (21%)
Query: 82 SDYILGEGGFGTV-YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR- 139
S+ ILG G GTV ++G + PVAVK + + L E+ L +
Sbjct: 37 SEKILGYGSSGTVVFQG--------SFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDD 85
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMF------------RGSLENHLFRKATVPLSWATRMM 187
HPN+++ YC E R L S EN +K P+S ++
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 142
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLD--SDYTAK-----------LSDFGLAKA 234
A G+A LH+ + +I+RD K NIL+ S +TA +SDFGL K
Sbjct: 143 -----ASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 235 GPQGDETHVST--RVMGTYGYAAPEYVMTG---HLTARSDVYSFGVVLLELLTGRKSVDK 289
G GT G+ APE + LT D++S G V +L+ K
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
Query: 290 TRPSKEQSLV 299
+ S+E +++
Sbjct: 256 DKYSRESNII 265
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 53/250 (21%)
Query: 82 SDYILGEGGFGTV-YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR- 139
S+ ILG G GTV ++G + PVAVK + + L E+ L +
Sbjct: 37 SEKILGYGSSGTVVFQG--------SFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDD 85
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMF------------RGSLENHLFRKATVPLSWATRMM 187
HPN+++ YC E R L S EN +K P+S ++
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 142
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLD--SDYTAK-----------LSDFGLAKA 234
A G+A LH+ + +I+RD K NIL+ S +TA +SDFGL K
Sbjct: 143 -----ASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 235 GPQGDETHVST--RVMGTYGYAAPEYVMTG---HLTARSDVYSFGVVLLELLTGRKSVDK 289
G GT G+ APE + LT D++S G V +L+ K
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
Query: 290 TRPSKEQSLV 299
+ S+E +++
Sbjct: 256 DKYSRESNII 265
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
IA K L LH ++ VI+RD K SN+L+++ K+ DFG+ +G D+
Sbjct: 114 IAVSIVKALEHLH-SKLSVIHRDVKPSNVLINALGQVKMCDFGI--SGYLVDDVAKDIDA 170
Query: 248 MGTYGYAAPEYV-----MTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWA 302
G Y APE + G+ + +SD++S G+ ++EL R D W
Sbjct: 171 -GCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYDS-----------WG 217
Query: 303 RPKLNDKRKMLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVE 355
P +++++ P+L + + + CL +N K RP ++++
Sbjct: 218 TP-FQQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 100/250 (40%), Gaps = 52/250 (20%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL-----------------QGHRE 127
++G G FG V V++ A+K+LNK + G +
Sbjct: 81 VIGRGAFGEV------AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 128 WLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMM 187
W+T +++ Q + NL ++ Y D L+ +F R E F + M+
Sbjct: 135 WITTLHYAFQDDN-NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARF--------YLAEMV 185
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV 247
IA + L ++H RD K NIL+D + +L+DFG + D T S+
Sbjct: 186 IAIDSVHQLHYVH--------RDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVA 236
Query: 248 MGTYGYAAPEYVMT-----GHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWA 302
+GT Y +PE + G D +S GV + E+L G P +SLV+
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET------PFYAESLVETY 290
Query: 303 RPKLNDKRKM 312
+N K +
Sbjct: 291 GKIMNHKERF 300
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 85 ILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHP--- 141
++G+G FG V K Y D V VA+K++ E + HR+ E+ L LR
Sbjct: 104 VIGKGXFGQVVKAY-DHKVHQH-----VALKMVRNEK-RFHRQAAEEIRILEHLRKQDKD 156
Query: 142 ---NLVKLIGYCCEDDHRLLVYEFMFRGSLE---NHLFRKATVPLSWATRMMIAFGAAKG 195
N++ ++ +H + +E + E + F+ ++PL A +
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK----FAHSILQC 212
Query: 196 LAFLHNAERPVIYRDFKTSNILLDSDYTA--KLSDFGLAKAGPQGDETHVSTRVMGTYGY 253
L LH +I+ D K NILL + K+ DFG + Q + +R Y
Sbjct: 213 LDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF-----Y 265
Query: 254 AAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
APE ++ D++S G +L ELLTG
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
Query: 138 LRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
LRHPN+V+ H +V E+ G L + A G++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS 129
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTA--KLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
+ H + V +RD K N LLD K++DFG +KA + +GT Y A
Sbjct: 130 YAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAVGTPAYIA 184
Query: 256 PEYVMTGHLTAR-SDVYSFGVVLLELLTG 283
PE ++ + +DV+S GV L +L G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 123/307 (40%), Gaps = 84/307 (27%)
Query: 73 LETITKSFRSDYILGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTE 131
LET +K + LG G FG V + + I+ R LK + LQ R E
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV-----------LQDPRYKNRE 50
Query: 132 VNFLGQLRHPNLVKLIGYCC------------EDDHRLL--------------------- 158
++ + L H N++KL+ Y DDH L
Sbjct: 51 LDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQN 110
Query: 159 -----VYEFM---FRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERPVIYRD 210
+ E++ L++ + ++P++ + + + + + F+H+ + +RD
Sbjct: 111 KYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLIS--IYIYQLFRAVGFIHSLG--ICHRD 166
Query: 211 FKTSNILLDS-DYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTG-HLTARS 268
K N+L++S D T KL DFG AK + + S + + Y APE ++ T
Sbjct: 167 IKPQNLLVNSKDNTLKLCDFGSAK---KLIPSEPSVAXICSRFYRAPELMLGATEYTPSI 223
Query: 269 DVYSFGVVLLELLTGRK------SVDKT--------RPSKEQSL--------VDWARPKL 306
D++S G V EL+ G+ S+D+ P+KEQ + V + K
Sbjct: 224 DLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKA 283
Query: 307 NDKRKML 313
D RK+L
Sbjct: 284 KDWRKIL 290
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 25/207 (12%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLT---------EVNFLG 136
LG G FG V+ E K+ V VK + KE + W+ E+ L
Sbjct: 32 LGSGAFGFVWTAVDKE------KNKEVVVKFIKKEKVL-EDCWIEDPKLGKVTLEIAILS 84
Query: 137 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRG-SLENHLFRKATVPLSWATRMMIAFGAAKG 195
++ H N++K++ LV E G L + R + A+ + +A G
Sbjct: 85 RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 196 LAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
L + +I+RD K NI++ D+T KL DFG A +G + GT Y A
Sbjct: 145 YLRLKD----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG---KLFYTFCGTIEYCA 197
Query: 256 PEYVMTG-HLTARSDVYSFGVVLLELL 281
PE +M + +++S GV L L+
Sbjct: 198 PEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 125/309 (40%), Gaps = 52/309 (16%)
Query: 86 LGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNK-----EGLQGHREWLTEVNFLGQLRH 140
LGEG FG V + ID + G + VAVK++ E + + L +N
Sbjct: 22 LGEGAFGKVVEC-IDH--KAGGRH--VAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNST 76
Query: 141 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKAT--VPLSWATRMMIAFGAAKGLAF 198
V+++ + H +V+E + L + F K +P +A+ K + F
Sbjct: 77 FRCVQMLEWFEHHGHICIVFELL---GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 199 LHNAERPVIYRDFKTSNIL-LDSDYTA------------------KLSDFGLAKAGPQGD 239
LH+ + + + D K NIL + SDYT K+ DFG A +
Sbjct: 134 LHSNK--LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH 191
Query: 240 ETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQ--- 296
T VSTR Y APE ++ + DV+S G +L+E G +V T SKE
Sbjct: 192 STLVSTR-----HYRAPEVILALGWSQPCDVWSIGCILIEYYLGF-TVFPTHDSKEHLAM 245
Query: 297 ---SLVDWARPKLNDKRKMLQIIDPRL---ENQYSVRAAQKACS-LAYYCLSQNPKARPL 349
L + + RK RL E+ + R +AC L + LSQ+ + L
Sbjct: 246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL 305
Query: 350 MSDVVETLE 358
+ + LE
Sbjct: 306 FDLIQKMLE 314
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 104/254 (40%), Gaps = 57/254 (22%)
Query: 82 SDYILGEGGFGTV-YKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLR- 139
S+ ILG G GTV ++G + PVAVK + + L E+ L +
Sbjct: 19 SEKILGYGSSGTVVFQG--------SFQGRPVAVKRMLIDFCDIA---LMEIKLLTESDD 67
Query: 140 HPNLVKLIGYCCEDDHRLLVYEFMF------------RGSLENHLFRKATVPLSWATRMM 187
HPN+++ YC E R L S EN +K P+S ++
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI- 124
Query: 188 IAFGAAKGLAFLHNAERPVIYRDFKTSNILLD--SDYTAK-----------LSDFGLAKA 234
A G+A LH+ + +I+RD K NIL+ S +TA +SDFGL K
Sbjct: 125 -----ASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 235 GPQGDETHVST--RVMGTYGYAAPEYVMTGH-------LTARSDVYSFGVVLLELLTGRK 285
G GT G+ APE + + LT D++S G V +L+ K
Sbjct: 178 LDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Query: 286 SVDKTRPSKEQSLV 299
+ S+E +++
Sbjct: 238 HPFGDKYSRESNII 251
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 94/221 (42%), Gaps = 29/221 (13%)
Query: 76 ITKSFRSDYILGEGGFGTVYKGY-IDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNF 134
+ FR +G G FG +Y G I N V +K V K H + L E
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------HPQLLYESKI 55
Query: 135 LGQLRH----PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAF 190
L+ PN V+ G E D+ +LV + + SLE+ LF + LS T +M+A
Sbjct: 56 YRILQGGTGIPN-VRWFG--VEGDYNVLVMD-LLGPSLED-LFNFCSRKLSLKTVLMLAD 110
Query: 191 GAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAK---LSDFGLAKA-GPQGDETHVSTR 246
+ F+H+ + ++RD K N L+ A + DFGLAK H+ R
Sbjct: 111 QMINRVEFVHS--KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYR 168
Query: 247 ----VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 283
+ GT YA+ + + R D+ S G VL+ L G
Sbjct: 169 ENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 10/149 (6%)
Query: 138 LRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
LRHPN+V+ H +V E+ G L + A G++
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS 129
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTA--KLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
+ H + V +RD K N LLD K+ DFG +K+ + +GT Y A
Sbjct: 130 YCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIA 184
Query: 256 PEYVMTGHLTAR-SDVYSFGVVLLELLTG 283
PE ++ + +DV+S GV L +L G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 10/149 (6%)
Query: 138 LRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLA 197
LRHPN+V+ H +V E+ G L + A G++
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS 128
Query: 198 FLHNAERPVIYRDFKTSNILLDSDYTA--KLSDFGLAKAGPQGDETHVSTRVMGTYGYAA 255
+ H + V +RD K N LLD K+ DFG +K+ + +GT Y A
Sbjct: 129 YCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIA 183
Query: 256 PEYVMTGHLTAR-SDVYSFGVVLLELLTG 283
PE ++ + +DV+S GV L +L G
Sbjct: 184 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDY---TAKLSDFGLAKAGPQGDETHVSTRVMGT 250
+G+ +LH + +++ D K NILL S Y K+ DFG+++ E +MGT
Sbjct: 142 EGVYYLH--QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR---EIMGT 196
Query: 251 YGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 282
Y APE + +T +D+++ G++ LLT
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 194 KGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQG------DETHVS--- 244
+ L+++H+ + +I+R+ K NI +D K+ DFGLAK + D ++
Sbjct: 127 EALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 245 ---TRVMGTYGYAAPEYVM-TGHLTARSDVYSFGVVLLELL 281
T +GT Y A E + TGH + D YS G++ E +
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 102/256 (39%), Gaps = 62/256 (24%)
Query: 72 ELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGL--------- 122
E++ + F ++G G FG V + R+ A+K+LNK +
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERI------YAMKILNKWEMLKRAETACF 121
Query: 123 --------QGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR 174
G +W+T +++ Q +++H LV ++ G L L +
Sbjct: 122 REERDVLVNGDCQWITALHYAFQ--------------DENHLYLVMDYYVGGDLLTLLSK 167
Query: 175 -KATVPLSWAT----RMMIAFGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDF 229
+ +P A M++A + L ++H RD K N+LLD + +L+DF
Sbjct: 168 FEDKLPEDMARFYIGEMVLAIDSIHQLHYVH--------RDIKPDNVLLDVNGHIRLADF 219
Query: 230 GLAKAGPQGDETHVSTRVMGTYGYAAPEYVMT-----GHLTARSDVYSFGVVLLELLTGR 284
G + D T S+ +GT Y +PE + G D +S GV + E+L G
Sbjct: 220 G-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
Query: 285 KSVDKTRPSKEQSLVD 300
P +SLV+
Sbjct: 279 T------PFYAESLVE 288
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,109,428
Number of Sequences: 62578
Number of extensions: 479724
Number of successful extensions: 3944
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 1249
Number of HSP's gapped (non-prelim): 1105
length of query: 431
length of database: 14,973,337
effective HSP length: 102
effective length of query: 329
effective length of database: 8,590,381
effective search space: 2826235349
effective search space used: 2826235349
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)