BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014082
(431 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P35055|HEM6_SOYBN Coproporphyrinogen-III oxidase, chloroplastic OS=Glycine max GN=CPX
PE=2 SV=1
Length = 385
Score = 627 bits (1616), Expect = e-179, Method: Compositional matrix adjust.
Identities = 314/431 (72%), Positives = 335/431 (77%), Gaps = 47/431 (10%)
Query: 1 MPPTTAVSASSSFTLFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRAAVSIE 60
M + VSA S FR S T T I + R + P+ M +RA VSIE
Sbjct: 2 MHCASIVSAPSYAFPFR-----SGSASTTPTAISLTKRSWKPPPS--MAKGPVRATVSIE 54
Query: 61 KETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKED 120
KETPE RP TFLR D+ +SS+S VRARFEKMIR+AQD+VC A+E DGG +FKED
Sbjct: 55 KETPEANRPETFLRGVDEAQSSTS----VRARFEKMIREAQDTVCSALEAADGGAQFKED 110
Query: 121 VWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAA 180
VWSRPGGGGGISRVLQDGA+WEKAGVNVSVVYGVMPP+AYRAAK +D+KPGP+PFFAA
Sbjct: 111 VWSRPGGGGGISRVLQDGAVWEKAGVNVSVVYGVMPPDAYRAAKGVPTDQKPGPVPFFAA 170
Query: 181 GISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFH 240
GISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTDLTPAYIFEEDVKHFH
Sbjct: 171 GISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEEDVKHFH 230
Query: 241 STQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATEC 300
S QK ACDKF+PTFYPRFKKWCDDYFYIKHRGERRGLGG+FFDDLNDYDQEMLLSFATEC
Sbjct: 231 SIQKQACDKFEPTFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLNDYDQEMLLSFATEC 290
Query: 301 ANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESIL 360
ANSVIPAY+PIIEKRKD PF D KAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESIL
Sbjct: 291 ANSVIPAYLPIIEKRKDLPFNDHQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESIL 350
Query: 361 VSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKL 420
VSLPLTARWEYDH P+EGSEEWKL
Sbjct: 351 VSLPLTARWEYDH------------------------------------KPEEGSEEWKL 374
Query: 421 LDACINPKEWI 431
LDACINPKEWI
Sbjct: 375 LDACINPKEWI 385
>sp|Q9LR75|HEM6_ARATH Coproporphyrinogen-III oxidase, chloroplastic OS=Arabidopsis
thaliana GN=CPX PE=1 SV=1
Length = 386
Score = 614 bits (1584), Expect = e-175, Method: Compositional matrix adjust.
Identities = 302/388 (77%), Positives = 322/388 (82%), Gaps = 37/388 (9%)
Query: 44 PTFKMTTTTIRAAVSIEKETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDS 103
P +R +VSIEKE PETERP TFLR+SDD + SSS+SSVRARFE MIR AQDS
Sbjct: 36 PIRNKPNLALRCSVSIEKEVPETERPFTFLRDSDDV-TPSSSSSSVRARFETMIRAAQDS 94
Query: 104 VCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAA 163
VC AIE +GG KFKEDVWSRPGGGGGISRVLQDG ++EKAGVNVSVVYGVMPPEAYRAA
Sbjct: 95 VCDAIEAIEGGPKFKEDVWSRPGGGGGISRVLQDGNVFEKAGVNVSVVYGVMPPEAYRAA 154
Query: 164 KAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGG 223
K +ASD+KPGP+PFFAAG+SSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGG
Sbjct: 155 KGSASDQKPGPVPFFAAGVSSVLHPKNPFAPTLHFNYRYFETDAPKDVPGAPRQWWFGGG 214
Query: 224 TDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFD 283
TD TPAYIFEEDVKHFHS QK ACDKFDP+FYPRFKKWCDDYFYIKHR ERRGLGG+FFD
Sbjct: 215 TDFTPAYIFEEDVKHFHSIQKQACDKFDPSFYPRFKKWCDDYFYIKHRDERRGLGGIFFD 274
Query: 284 DLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYD 343
DLNDYDQEMLLSFATECANSV+PAYIPI+EKRKD FT+QHKAWQQLRRGRYVEFNLVYD
Sbjct: 275 DLNDYDQEMLLSFATECANSVVPAYIPIVEKRKDMEFTEQHKAWQQLRRGRYVEFNLVYD 334
Query: 344 RGTTFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFF 403
RGTTFGLKTGGRIESILVSLPL+ARWEYDH
Sbjct: 335 RGTTFGLKTGGRIESILVSLPLSARWEYDH------------------------------ 364
Query: 404 SLFSMQNPKEGSEEWKLLDACINPKEWI 431
P+EG+EEWKLLDACINPKEWI
Sbjct: 365 ------KPEEGTEEWKLLDACINPKEWI 386
>sp|Q42946|HEM6_TOBAC Coproporphyrinogen-III oxidase, chloroplastic OS=Nicotiana tabacum
GN=CPX PE=2 SV=1
Length = 397
Score = 585 bits (1508), Expect = e-166, Method: Compositional matrix adjust.
Identities = 301/428 (70%), Positives = 330/428 (77%), Gaps = 42/428 (9%)
Query: 8 SASSSFT-LFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTTT--TIRAAVSIEKETP 64
SAS S+T + P SW + T + +P F + T K T + + IEKE
Sbjct: 8 SASCSWTPTSQFPHSWHSSPSFLTKPLNLP--FTESYKTAKRPTPNYSFKVQAMIEKEVA 65
Query: 65 ETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSR 124
+ +P FLRESD + +S++SSVR RFEKM R+AQDSVC AIEK DGG KFKEDVWSR
Sbjct: 66 VSHKPDAFLRESDMGSNVTSNSSSVRGRFEKMRREAQDSVCLAIEKADGGAKFKEDVWSR 125
Query: 125 PGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAAS-DEKPGPIPFFAAGIS 183
PGGGGG S VLQDGA++EKAGVNVSVVYGVMPPEAYRAA+ + + KPGPIPFFAAG+S
Sbjct: 126 PGGGGGHSSVLQDGAVFEKAGVNVSVVYGVMPPEAYRAARPTDNGNVKPGPIPFFAAGVS 185
Query: 184 SVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQ 243
SVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTD TPAYIFEEDVKHFHS Q
Sbjct: 186 SVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDFTPAYIFEEDVKHFHSVQ 245
Query: 244 KSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANS 303
K+ACDKFD +FYPRFKKWC DYFYIKHR ERRGLGG+FFDD NDYDQEMLLSF+TECANS
Sbjct: 246 KAACDKFDASFYPRFKKWCVDYFYIKHRDERRGLGGIFFDDFNDYDQEMLLSFSTECANS 305
Query: 304 VIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSL 363
VIPAYIPI+EKRKDTPFTD+HKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSL
Sbjct: 306 VIPAYIPIVEKRKDTPFTDKHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSL 365
Query: 364 PLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDA 423
PLTARWEYDH P+EG+EEWKLLDA
Sbjct: 366 PLTARWEYDH------------------------------------KPEEGTEEWKLLDA 389
Query: 424 CINPKEWI 431
CINPKEWI
Sbjct: 390 CINPKEWI 397
>sp|Q7XPL2|HEM6_ORYSJ Coproporphyrinogen-III oxidase, chloroplastic OS=Oryza sativa
subsp. japonica GN=CPX PE=2 SV=2
Length = 399
Score = 583 bits (1504), Expect = e-166, Method: Compositional matrix adjust.
Identities = 285/387 (73%), Positives = 312/387 (80%), Gaps = 48/387 (12%)
Query: 53 IRAAVSIEKETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTD 112
+RA+V+IEKETPE+E PPTFLRE + S + + SVR RFE MIR Q VC A+E+ D
Sbjct: 51 VRASVAIEKETPESEPPPTFLRE----DGSGAGSGSVRERFEAMIRRVQGEVCAALEEAD 106
Query: 113 G-GGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAK------- 164
G G +F EDVWSRPGGGGGISRVLQDG ++EKAGVNVSVVYGVMPP+AYRAAK
Sbjct: 107 GSGARFVEDVWSRPGGGGGISRVLQDGRVFEKAGVNVSVVYGVMPPDAYRAAKGEAGKNG 166
Query: 165 AAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGT 224
AAA K GP+PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGT
Sbjct: 167 AAADGPKAGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGT 226
Query: 225 DLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDD 284
DLTP+YI EEDVKHFHS QK ACDKFDP+FYPRFKKWCDDYFYIKHR ERRGLGG+FFDD
Sbjct: 227 DLTPSYIIEEDVKHFHSVQKQACDKFDPSFYPRFKKWCDDYFYIKHRNERRGLGGIFFDD 286
Query: 285 LNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDR 344
LNDYDQEMLL+FATECA+SV+PAYIPIIE+RKDTPFT++HKAWQQLRRGRYVEFNLVYDR
Sbjct: 287 LNDYDQEMLLNFATECADSVVPAYIPIIERRKDTPFTEEHKAWQQLRRGRYVEFNLVYDR 346
Query: 345 GTTFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFS 404
GTTFGLKTGGRIESILVSLPLTARW+YDH
Sbjct: 347 GTTFGLKTGGRIESILVSLPLTARWQYDH------------------------------- 375
Query: 405 LFSMQNPKEGSEEWKLLDACINPKEWI 431
P+EG+EE KLLDACINPKEW+
Sbjct: 376 -----TPEEGTEERKLLDACINPKEWL 397
>sp|Q42840|HEM6_HORVU Coproporphyrinogen-III oxidase, chloroplastic OS=Hordeum vulgare
GN=CPX PE=2 SV=1
Length = 391
Score = 533 bits (1374), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/381 (70%), Positives = 291/381 (76%), Gaps = 46/381 (12%)
Query: 57 VSIEKETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGK 116
V+IEKE PE E P TFLRE + S + + SVR RFE MIR Q +C A+E+ DG GK
Sbjct: 51 VAIEKEVPEKEAPTTFLRE----DGSGAGSGSVRERFEGMIRRVQGEICAALEEADGSGK 106
Query: 117 -FKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAA-----SDE 170
F EDVWSRPGG SRVLQDG ++EKAGVNVS V GV P AYRAAK AA
Sbjct: 107 RFVEDVWSRPGGVCVHSRVLQDGNVFEKAGVNVSAVIGVCPRSAYRAAKGAAKNGAADGH 166
Query: 171 KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAY 230
K GP+PFF+AGISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPR WWFGGGTDLTP+Y
Sbjct: 167 KAGPVPFFSAGISSVLHPKNPFAPTLHFNYRYFETDAPKDVPGAPRSWWFGGGTDLTPSY 226
Query: 231 IFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQ 290
+ EEDVKHFHS QK CDKFDP+FYPRFKKWCDDYFYIKHR ERRGLGG+FFDDLNDYDQ
Sbjct: 227 LIEEDVKHFHSVQKQTCDKFDPSFYPRFKKWCDDYFYIKHRNERRGLGGIFFDDLNDYDQ 286
Query: 291 EMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGL 350
+MLL+FATECA SVIPAYIPIIE+RKDTPF ++ KAWQQ+RRGRYVEFNLVYDRGTTFGL
Sbjct: 287 DMLLNFATECAGSVIPAYIPIIERRKDTPFNEEQKAWQQVRRGRYVEFNLVYDRGTTFGL 346
Query: 351 KTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQN 410
KTGGRIESILVSLPLTARWEYDH
Sbjct: 347 KTGGRIESILVSLPLTARWEYDH------------------------------------K 370
Query: 411 PKEGSEEWKLLDACINPKEWI 431
P+EGSEEWKLLDACINPKEW+
Sbjct: 371 PEEGSEEWKLLDACINPKEWL 391
>sp|Q9V3D2|HEM6_DROME Coproporphyrinogen-III oxidase OS=Drosophila melanogaster GN=Coprox
PE=1 SV=1
Length = 390
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/357 (49%), Positives = 229/357 (64%), Gaps = 43/357 (12%)
Query: 78 DKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGG-KFKEDVWSRPGGGGGISRVLQ 136
D ++ ++R R E +I + Q C+A+E + G KFK D W RP GGGGI+ VLQ
Sbjct: 74 DSKALLGDKENMRHRMEILIMEIQAEFCRALEAEENCGQKFKVDRWERPEGGGGITCVLQ 133
Query: 137 DGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGP-IPFFAAGISSVLHPKNPFAPT 195
DG ++EKAGVN+SVV G +PP A + +A + K G +PFFA+G+S+V+HP+NP PT
Sbjct: 134 DGDVFEKAGVNISVVTGSLPPAAVQQMRARGKNLKEGASLPFFASGVSAVIHPRNPHVPT 193
Query: 196 LHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFY 255
+HFNYRYFE + K +QWWFGGGTDLTP Y+ E+D HFH T KSACD+ DPT+Y
Sbjct: 194 IHFNYRYFEVETAK----GEKQWWFGGGTDLTPYYLCEKDASHFHQTLKSACDEHDPTYY 249
Query: 256 PRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKR 315
PRFKKWCDDYF IKHR E RG+GG+FFDD++ +QE +F + CA +VIP+Y+P++ K
Sbjct: 250 PRFKKWCDDYFRIKHRNESRGIGGIFFDDIDSPNQEAAFNFVSSCARAVIPSYVPLVRKH 309
Query: 316 KDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHV 374
K+ + + + WQ LRRGRYVEFNL+YDRGT FGL T G R ESIL+SLPL ARWEY
Sbjct: 310 KNREYGNNERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLHARWEY--- 366
Query: 375 SFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI 431
M PK SEE KL+ NPK+W+
Sbjct: 367 ---------------------------------MHEPKSQSEEGKLMKVLKNPKDWV 390
>sp|P36551|HEM6_HUMAN Coproporphyrinogen-III oxidase, mitochondrial OS=Homo sapiens
GN=CPOX PE=1 SV=3
Length = 454
Score = 357 bits (916), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 222/346 (64%), Gaps = 43/346 (12%)
Query: 89 VRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNV 148
++ + E +I + Q VCQA+ + DGG F D W R GGGGIS VLQDG ++EKAGV++
Sbjct: 148 MKTKMELLILETQAQVCQALAQVDGGANFSVDRWERKEGGGGISCVLQDGCVFEKAGVSI 207
Query: 149 SVVYGVMPPEAYRAAKAAAS--DEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETD 206
SVV+G + EA + ++ K G +PF A G+SSV+HPKNP APT+HFNYRYFE +
Sbjct: 208 SVVHGNLSEEAAKQMRSRGKVLKTKDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVE 267
Query: 207 APKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYF 266
+QWWFGGG DLTP Y+ +ED HFH T K ACD+ P YP+FKKWCDDYF
Sbjct: 268 EADGN----KQWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYF 323
Query: 267 YIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKA 326
+I HRGERRG+GG+FFDDL+ +E + F CA +V+P+YIP+++K D FT Q K
Sbjct: 324 FIAHRGERRGIGGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKL 383
Query: 327 WQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHVSFLEHSGEYAS 385
WQQLRRGRYVEFNL+YDRGT FGL T G RIESIL+SLPLTARWEY
Sbjct: 384 WQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEY-------------- 429
Query: 386 DVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI 431
M +P E S+E ++L+ +P++W+
Sbjct: 430 ----------------------MHSPSENSKEAEILEVLRHPRDWV 453
>sp|Q3B7D0|HEM6_RAT Coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus
GN=Cpox PE=2 SV=1
Length = 443
Score = 352 bits (903), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 174/346 (50%), Positives = 219/346 (63%), Gaps = 43/346 (12%)
Query: 89 VRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNV 148
++ + E MI + Q VC+A+ + DG F D W R GGGGI+ VLQDG ++EKAGVN+
Sbjct: 137 MKTKMELMIMETQAQVCRALAQVDGVADFSVDRWERKEGGGGITCVLQDGRVFEKAGVNI 196
Query: 149 SVVYGVMPPEAYRA--AKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETD 206
SVV+G + EA ++ A +K G +PF A GISSV+HPKNP+APT+HFNYRYFE +
Sbjct: 197 SVVHGNLSEEAANQMRSRGKALKKKDGKLPFTAMGISSVIHPKNPYAPTMHFNYRYFEVE 256
Query: 207 APKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYF 266
WWFGGG DLTP Y+ ED HFH T K ACD+ P YP+FKKWCDDYF
Sbjct: 257 EAD----GKMHWWFGGGCDLTPTYLNREDAVHFHRTLKEACDQHGPDIYPKFKKWCDDYF 312
Query: 267 YIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKA 326
+I HRGERRG+GG+FFDDL+ +E F CA +V+P+Y+PI++K D +T Q K
Sbjct: 313 FIAHRGERRGIGGIFFDDLDSPSKEEAFRFVKTCAEAVVPSYVPIVKKHCDDSYTPQDKL 372
Query: 327 WQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHVSFLEHSGEYAS 385
WQQLRRGRYVEFNLVYDRGT FGL T G RIESIL+SLPLTARWEY
Sbjct: 373 WQQLRRGRYVEFNLVYDRGTKFGLFTPGSRIESILMSLPLTARWEY-------------- 418
Query: 386 DVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI 431
M +P E S+E ++L+ +PK+W+
Sbjct: 419 ----------------------MHSPPENSKEAEILEVLRHPKDWV 442
>sp|P36552|HEM6_MOUSE Coproporphyrinogen-III oxidase, mitochondrial OS=Mus musculus
GN=Cpox PE=1 SV=2
Length = 443
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 168/346 (48%), Positives = 216/346 (62%), Gaps = 43/346 (12%)
Query: 89 VRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNV 148
++ + E MI + Q VC+A+ + DG F D W R GGGGI+ VLQDG ++EKAGV++
Sbjct: 137 MKTKMELMIMETQAQVCRALAQVDGVADFTVDRWERKEGGGGITCVLQDGRVFEKAGVSI 196
Query: 149 SVVYGVMPPEAYRAAKAAAS--DEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETD 206
SVV+G + EA + K +PF A G+SSV+HPKNP+APT+HFNYRYFE +
Sbjct: 197 SVVHGNLSEEAANQMRGRGKTLKTKDSKLPFTAMGVSSVIHPKNPYAPTMHFNYRYFEVE 256
Query: 207 APKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYF 266
WWFGGG DLTP Y+ +ED HFH T K ACD+ P YP+FKKWCDDYF
Sbjct: 257 EADGNT----HWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDIYPKFKKWCDDYF 312
Query: 267 YIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKA 326
+I HRGERRG+GG+FFDDL+ +E F CA +V+P+Y+PI++K D +T + K
Sbjct: 313 FIVHRGERRGIGGIFFDDLDSPSKEEAFRFVKTCAEAVVPSYVPIVKKHCDDSYTPRDKL 372
Query: 327 WQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHVSFLEHSGEYAS 385
WQQLRRGRYVEFNL+YDRGT FGL T G RIESIL+SLPLTARWEY
Sbjct: 373 WQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEY-------------- 418
Query: 386 DVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI 431
M +P E S+E ++L+ +PK+W+
Sbjct: 419 ----------------------MHSPPENSKEAEILEVLRHPKDWV 442
>sp|P11353|HEM6_YEAST Coproporphyrinogen-III oxidase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HEM13 PE=1 SV=2
Length = 328
Score = 318 bits (814), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 211/356 (59%), Gaps = 53/356 (14%)
Query: 89 VRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPG-GGGGISRVLQDGAIWEKAGVN 147
+R + E +IR Q + Q +E D KF D W+R GGGG S V+QDG +EK GVN
Sbjct: 12 IRQQMEALIRRKQAEITQGLESIDTV-KFHADTWTRGNDGGGGTSMVIQDGTTFEKGGVN 70
Query: 148 VSVVYGVMPPEAYRAAKA------AASDEKPG-----PIPFFAAGISSVLHPKNPFAPTL 196
VSVVYG + P A A KA D K G + FFA G+S V+HP NP APT
Sbjct: 71 VSVVYGQLSPAAVSAMKADHKNLRLPEDPKTGLPVTDGVKFFACGLSMVIHPVNPHAPTT 130
Query: 197 HFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYP 256
H NYRYFET + G P+ WWFGGG DLTP+Y++EED + FH K A DK D YP
Sbjct: 131 HLNYRYFET---WNQDGTPQTWWFGGGADLTPSYLYEEDGQLFHQLHKDALDKHDTALYP 187
Query: 257 RFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRK 316
RFKKWCD+YFYI HR E RG+GG+FFDD ++ D + +L +C ++ +P+Y+ I+++RK
Sbjct: 188 RFKKWCDEYFYITHRKETRGIGGIFFDDYDERDPQEILKMVEDCFDAFLPSYLTIVKRRK 247
Query: 317 DTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHVS 375
D P+T + + WQ +RRGRYVEFNL+YDRGT FGL+T G R+ESIL+SLP A W Y+H
Sbjct: 248 DMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWLYNH-- 305
Query: 376 FLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI 431
+P GS E KLL+ P+EW+
Sbjct: 306 ----------------------------------HPAPGSREAKLLEVTTKPREWV 327
>sp|Q9UTE2|HEM6_SCHPO Probable coproporphyrinogen-III oxidase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=hem13 PE=3 SV=1
Length = 312
Score = 311 bits (798), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 150/295 (50%), Positives = 198/295 (67%), Gaps = 8/295 (2%)
Query: 82 SSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIW 141
S + + + EK+I D Q + +E DG KF +D W++ GG GIS V+QDG ++
Sbjct: 2 SDITVEPIGKQMEKLILDVQQEIVAGLEAVDGQ-KFFQDKWTKGEGGYGISCVIQDGNVF 60
Query: 142 EKAGVNVSVVYGVMPPEAYRAAKA--AASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFN 199
EK GVN S+V G + +A + +A D +PFFAAGIS V+HP+NP APT H N
Sbjct: 61 EKGGVNTSIVQGKLNQDAVQRMRANHEGIDRTAKELPFFAAGISMVIHPRNPMAPTTHLN 120
Query: 200 YRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFK 259
YRYFE + WWFGGG DLTP+ +FEED KHFH K ACD+ DPTFYPRFK
Sbjct: 121 YRYFELV----NSDGKKIWWFGGGADLTPSILFEEDGKHFHKLHKEACDRHDPTFYPRFK 176
Query: 260 KWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTP 319
KW D+YF IKHR E RG+GG+FFDDL++ D + L +F +CA++ +PAY+PI+EKRK+
Sbjct: 177 KWADEYFLIKHRKETRGIGGIFFDDLSEKDPQELFAFVKDCAHTFLPAYVPIMEKRKNME 236
Query: 320 FTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDH 373
FT+ K +Q +RRG Y EFN++YDRGT FGL+ R+ESIL++LPL A W Y +
Sbjct: 237 FTEDDKEFQLIRRGYYAEFNVMYDRGTWFGLQAPEPRVESILMTLPLHASWRYKY 291
>sp|Q5N3S5|HEM6_SYNP6 Coproporphyrinogen-III oxidase, aerobic OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemF
PE=3 SV=1
Length = 342
Score = 309 bits (791), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 212/372 (56%), Gaps = 77/372 (20%)
Query: 87 SSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGV 146
S R R ++ ++ QD +C +E DGGG+F+ED W RP GGGG SRV+++G ++E+ GV
Sbjct: 16 SDSRERVKQFMQTLQDEICAGLEALDGGGQFREDSWERPEGGGGRSRVIREGNVFEQGGV 75
Query: 147 NVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETD 206
N S V+G P + A A+ +FA G S VLHP+NP+ PT+H NYRYFE
Sbjct: 76 NFSEVWGEKLPPSILAQYPEAAGHG-----YFATGTSMVLHPRNPYIPTVHLNYRYFE-- 128
Query: 207 APKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYF 266
A WWFGGG DLTP Y F ED KHFHS+ K+ACD+ P FY FK WCD+YF
Sbjct: 129 -------AGPVWWFGGGADLTPYYPFAEDAKHFHSSFKAACDRHYPQFYDVFKLWCDEYF 181
Query: 267 YIKHRGERRGLGGLFFD------DL---------------------NDYDQEMLLSFATE 299
++KHRGE RG+GG+FFD DL +D + E L +FA +
Sbjct: 182 FLKHRGETRGIGGIFFDYQDGRGDLYNKGPAPSGPAGQKAAEVGIVSDLNWEKLFAFAQD 241
Query: 300 CANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESI 359
C + +PAY PI+E+RKDTP+ D+ + +Q RRGRYVEFNLVYDRGT FGL+T GR ESI
Sbjct: 242 CGRTFLPAYSPIVERRKDTPWGDRERQFQLYRRGRYVEFNLVYDRGTIFGLQTNGRTESI 301
Query: 360 LVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWK 419
L+SLP RWEY M P+ GS E +
Sbjct: 302 LMSLPPLVRWEY------------------------------------MYQPEAGSREQE 325
Query: 420 LLDACINPKEWI 431
L D + P++W+
Sbjct: 326 LYDVFLKPQDWV 337
>sp|Q8DL15|HEM6_THEEB Coproporphyrinogen-III oxidase, aerobic OS=Thermosynechococcus
elongatus (strain BP-1) GN=hemF PE=3 SV=2
Length = 338
Score = 302 bits (773), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/321 (45%), Positives = 194/321 (60%), Gaps = 41/321 (12%)
Query: 81 SSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAI 140
+S++ S R R ++D QD +CQ +E DGG +F+ED W RP GGGG SRV+++G +
Sbjct: 7 ASTAVPSDSRQRVATFLKDLQDQICQGLEAADGGAQFQEDTWQRPEGGGGRSRVMKNGQL 66
Query: 141 WEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNY 200
E+ GVN S V+G P + A + A+ F+A G S VLHP+NP+ PT+H NY
Sbjct: 67 LEQGGVNFSEVWGEQLPPSILAQRPEAAG-----YGFYATGTSMVLHPRNPYVPTVHLNY 121
Query: 201 RYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKK 260
RYFE A WWFGGG DLTP Y F ED KHFH ++ACD+ +YP FK+
Sbjct: 122 RYFE---------AGPVWWFGGGADLTPYYPFAEDAKHFHQVHQAACDRHHREYYPVFKR 172
Query: 261 WCDDYFYIKHRGERRGLGGLFFDDLNDYDQEM---------------------------L 293
WCD+YFY+KHRGE RG+GG+FFD + D+E+ L
Sbjct: 173 WCDEYFYLKHRGETRGVGGIFFDYQDGSDRELYRGPNPDGEAARYSQRVGSIGSRSWEDL 232
Query: 294 LSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTG 353
+F C + + AY+PI+E+R+ + D+ + +Q RRGRYVEFNLVYDRGT FGL+T
Sbjct: 233 FAFIQSCGQAFLEAYLPIVERRRHLTYGDRERQFQLYRRGRYVEFNLVYDRGTIFGLQTN 292
Query: 354 GRIESILVSLPLTARWEYDHV 374
GR ESIL+SLP RWEY +
Sbjct: 293 GRTESILMSLPPLVRWEYGYT 313
>sp|Q7NEK3|HEM6_GLOVI Coproporphyrinogen-III oxidase, aerobic OS=Gloeobacter violaceus
(strain PCC 7421) GN=hemF PE=3 SV=1
Length = 289
Score = 302 bits (773), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 141/277 (50%), Positives = 187/277 (67%), Gaps = 15/277 (5%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMP 156
++ QD++ +E DG G+F ED+W R GGGG SR+L +G ++E+AG+ S V+G
Sbjct: 1 MQSLQDNITSRLEAVDGEGRFVEDLWEREEGGGGRSRILTEGRVFERAGIGFSEVHGSHL 60
Query: 157 PEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPR 216
P + + A PF+ G S VLHP+NP+ PT+H NYRYFE A
Sbjct: 61 PPSILQQRPEAEGH-----PFYVTGTSMVLHPRNPYVPTVHLNYRYFE---------AGP 106
Query: 217 QWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRG 276
WWFGGG DLTP Y F ED HFH+T K+ACD DP +YPRFKKWCD+YFY+KHR E RG
Sbjct: 107 VWWFGGGADLTPYYGFVEDAAHFHATLKAACDAHDPEYYPRFKKWCDEYFYLKHRQEPRG 166
Query: 277 LGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYV 336
+GG+FFD + D E + +FA C N+ +PAY+PI+E+R P+ ++ + +Q RRGRYV
Sbjct: 167 VGGIFFDYVQG-DWEKIFAFAQSCGNAFLPAYLPIVERRHTLPYAERERNFQLYRRGRYV 225
Query: 337 EFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
EFNLV+DRGT FGL+T GRIESIL+S+P RWEY++
Sbjct: 226 EFNLVWDRGTIFGLQTNGRIESILMSMPPLVRWEYNY 262
>sp|Q0VTD7|HEM6_ALCBS Coproporphyrinogen-III oxidase, aerobic OS=Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573) GN=hemF PE=3 SV=1
Length = 302
Score = 296 bits (758), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/278 (52%), Positives = 180/278 (64%), Gaps = 11/278 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG-VM 155
+ D QD +C A+ DG F+ED W R GGGG SRVL++GA+ EK GVN S V+G +
Sbjct: 13 LLDLQDRICDALGAEDGAATFREDSWEREQGGGGRSRVLENGAVIEKGGVNFSHVFGEQL 72
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A A A F A G+S V+HPKNP+ PT H N R+F + + P
Sbjct: 73 PPSATEARPELAGRS------FQAMGVSLVIHPKNPYVPTSHANVRFFVAEKEGEAP--- 123
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y FEEDV H+H T K AC F YP FK WCDDYFY+KHR E R
Sbjct: 124 -VWWFGGGFDLTPYYGFEEDVVHWHQTAKVACQPFGKEIYPEFKTWCDDYFYLKHRNEPR 182
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN +D + + ++ +PAY PI+ +RKD F D+ + +Q RRGRY
Sbjct: 183 GVGGLFFDDLNRFDFDTSFALMRSIGDAYVPAYQPILARRKDHEFGDRERQFQLYRRGRY 242
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
VEFNLVYDRGT FGL++GGR ESIL+SLP RW+YD+
Sbjct: 243 VEFNLVYDRGTIFGLQSGGRTESILMSLPPLVRWDYDY 280
>sp|Q8YX58|HEM62_NOSS1 Coproporphyrinogen-III oxidase, aerobic 2 OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=hemF2 PE=3 SV=1
Length = 347
Score = 292 bits (747), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 192/307 (62%), Gaps = 39/307 (12%)
Query: 90 RARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVS 149
R R ++ +++ QD +C A+E+ DG F +D W R GG G +RV+++G ++E+ GVN S
Sbjct: 31 RQRSQQFMQNLQDEICTALEQLDGKASFHQDHWERAEGGEGRTRVIREGRVFEQGGVNFS 90
Query: 150 VVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPK 209
V+G P + A + A+ + FFA G S VLHP+NP+ PT+H NYRYFE
Sbjct: 91 AVWGNSLPASILAQRPEAAGHE-----FFATGTSMVLHPRNPYVPTVHLNYRYFE----- 140
Query: 210 DTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIK 269
A WWFGGG DLTP Y F+ED HFH T K+ACD +P +YP FK+WCD+YFY++
Sbjct: 141 ----AGPIWWFGGGADLTPYYAFKEDAVHFHQTLKNACDVHNPEYYPTFKRWCDEYFYLR 196
Query: 270 HRGERRGLGGLFFD----------------DLNDYDQEM---------LLSFATECANSV 304
HR E+RG+GG+FFD + Y Q++ + +F C +
Sbjct: 197 HREEQRGIGGIFFDYQDASGKLYVESQTDSSVAIYSQKVGNVARNWEDIFAFVQSCGQAF 256
Query: 305 IPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLP 364
+PAY+PI+E+R+ + D+ + +Q RRGRYVEFNLVYDRGT FGL+T GR ESIL+SLP
Sbjct: 257 LPAYLPIVERRQGIEYGDRQRNFQLYRRGRYVEFNLVYDRGTVFGLQTKGRTESILMSLP 316
Query: 365 LTARWEY 371
ARWEY
Sbjct: 317 PLARWEY 323
>sp|Q8YZ37|HEM61_NOSS1 Coproporphyrinogen-III oxidase, aerobic 1 OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=hemF1 PE=3 SV=1
Length = 317
Score = 291 bits (746), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 150/303 (49%), Positives = 185/303 (61%), Gaps = 40/303 (13%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMP 156
++ QD + QA+ K DGG +F ED W RP GGGG SRVL+DGAI+E+AGVN S V+G
Sbjct: 1 MKQLQDEITQALTKLDGGSEFHEDSWERPEGGGGRSRVLRDGAIFEQAGVNFSEVWGSHL 60
Query: 157 PEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPR 216
P + A + A F+A G S VLHP+NP+ PT+H NYRYFE A
Sbjct: 61 PPSILAQRPEAEGHG-----FYATGTSLVLHPRNPYVPTVHLNYRYFE---------AGP 106
Query: 217 QWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRG 276
WWFGGG DLTP Y F ED HFH T K ACD+ P +YP FK+WCD+YFY+KHR E RG
Sbjct: 107 VWWFGGGADLTPYYPFAEDAAHFHQTLKLACDEHHPEYYPVFKRWCDEYFYLKHRDETRG 166
Query: 277 LGGLFFD----------------DLNDY----------DQEMLLSFATECANSVIPAYIP 310
+GGLFFD + +Y D E L SF + +PAY+P
Sbjct: 167 VGGLFFDYQDGQGVLYRGPNPKGEAANYSNQVGEPASRDWEDLFSFIQGSGKAFLPAYVP 226
Query: 311 IIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWE 370
I+E+R + D+ + +Q RRGRYVEFNLVYDRGT FGL+T GR ESIL+SLP RWE
Sbjct: 227 IVERRHGMEYGDRQRNFQLYRRGRYVEFNLVYDRGTIFGLQTNGRTESILMSLPPLVRWE 286
Query: 371 YDH 373
Y +
Sbjct: 287 YGY 289
>sp|Q21PU0|HEM6_SACD2 Coproporphyrinogen-III oxidase, aerobic OS=Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024) GN=hemF PE=3 SV=1
Length = 303
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/291 (50%), Positives = 185/291 (63%), Gaps = 13/291 (4%)
Query: 82 SSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIW 141
++S+ +V+A + + QD +CQ + DG F ED W RP GGGG SRVL +GA+
Sbjct: 2 TASNKQAVKA----YLLNLQDKICQVLAAVDGKETFVEDSWQRPEGGGGRSRVLTNGAVI 57
Query: 142 EKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYR 201
EK GVN S V+G P A A A + F A G+S V+HP NP PT H N R
Sbjct: 58 EKGGVNFSHVHGSSMP-----ASATAHRPELAGRSFEAMGVSLVIHPNNPHVPTSHANVR 112
Query: 202 YFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKW 261
+F + GA WWFGGG DLTP Y +ED +H+H+T K+AC F YPR+KKW
Sbjct: 113 FFIAE----KEGAEPVWWFGGGYDLTPYYGNDEDCRHWHNTAKAACAPFGEDKYPRYKKW 168
Query: 262 CDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFT 321
CD+YFY+KHR E RG+GGLFFDDLN+ + +F +S AY+PI+E+RKD P+
Sbjct: 169 CDEYFYLKHRDEPRGVGGLFFDDLNELGFDQSFAFMQAVGDSYTQAYVPIVERRKDEPYN 228
Query: 322 DQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
+ +Q RRGRYVEFNLVYDRGT FGL+TGGR ESIL+SLP RWEYD
Sbjct: 229 QAQRDFQLYRRGRYVEFNLVYDRGTLFGLQTGGRTESILMSLPPLVRWEYD 279
>sp|Q7V9T7|HEM6_PROMA Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=hemF PE=3 SV=1
Length = 343
Score = 289 bits (740), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 200/343 (58%), Gaps = 40/343 (11%)
Query: 81 SSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAI 140
S S ++ R + + + QD +C+ +E DG G F+E+ W RP GGGG SRV+++G I
Sbjct: 2 SLSQPSTQSRVKVKSFLTGLQDDICKGLENIDGEGTFQEESWERPEGGGGRSRVMREGRI 61
Query: 141 WEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNY 200
+E+ GVN S V+G P + + A K +FA G S VLHP+NP+ PT+H NY
Sbjct: 62 FEQGGVNFSEVHGEELPPSILNQRPEAKGHK-----WFATGTSMVLHPRNPYIPTVHLNY 116
Query: 201 RYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKK 260
RYFE A WWFGGG DLTP Y + +D +HFH + ACD +P + FK
Sbjct: 117 RYFE---------AGPVWWFGGGADLTPYYPYLKDTRHFHKIHQEACDSINPKLHKVFKP 167
Query: 261 WCDDYFYIKHRGERRGLGGLFFD-----------------------DLNDYDQ--EMLLS 295
WCD+YF++KHR E RG+GG+FFD +L +Y E L S
Sbjct: 168 WCDEYFFLKHRNESRGVGGIFFDYQDGSGKLYKGQNPNGLSSIASKELGEYKLSWEDLFS 227
Query: 296 FATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGR 355
A C N+ +P+YIPIIEKR + F+D+ + +Q RRGRYVEFNLV+DRGT FGL+T GR
Sbjct: 228 LAKACGNAFLPSYIPIIEKRHNQTFSDRERNFQLYRRGRYVEFNLVWDRGTIFGLQTNGR 287
Query: 356 IESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSW-TDE 397
ESIL+SLP ARWEY + E +DV + W TDE
Sbjct: 288 TESILMSLPPLARWEYGFKAPPESRESLLTDVFTKPQEWFTDE 330
>sp|A2C524|HEM6_PROM1 Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus
(strain NATL1A) GN=hemF PE=3 SV=1
Length = 348
Score = 288 bits (738), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 196/323 (60%), Gaps = 39/323 (12%)
Query: 76 SDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVL 135
S ++ ++ A++ RAR +K++ + QD +C +E DG GKF E+ W RP GGGG SRVL
Sbjct: 2 SSSQDKANLPANNSRARAKKLVLELQDEICAGLETIDGEGKFLEESWERPEGGGGRSRVL 61
Query: 136 QDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPT 195
+DG I+E+ GVN S V+G P + + + A +FA G S VLHPKNP+ PT
Sbjct: 62 KDGKIFEQGGVNFSEVHGNELPPSIISQRPEAKGHS-----WFATGTSMVLHPKNPYIPT 116
Query: 196 LHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFY 255
+H NYRYFE A WWFGGG DLTP Y + D +HFHS K+ACD D +
Sbjct: 117 VHLNYRYFE---------AGPVWWFGGGADLTPFYPYLSDTRHFHSCHKNACDTIDKDLH 167
Query: 256 PRFKKWCDDYFYIKHRGERRGLGGLFFD-----------------------DLNDY--DQ 290
FK WCD+YF++KHR E RG+GG+F+D +L +Y +
Sbjct: 168 KVFKPWCDEYFFLKHRNETRGVGGIFYDYQDGSGLLYKGQNANGKASKIAKELGEYSLNW 227
Query: 291 EMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGL 350
E L S A C + +P+Y PII+KRK+ F+ + + +Q RRGRY EFNLV+DRGT FGL
Sbjct: 228 ENLFSLAKACGQAFLPSYEPIIKKRKNQSFSTKERDFQLYRRGRYAEFNLVWDRGTIFGL 287
Query: 351 KTGGRIESILVSLPLTARWEYDH 373
+T GR ESIL+SLP ARWEY +
Sbjct: 288 QTNGRTESILMSLPPLARWEYGY 310
>sp|A4XNB8|HEM6_PSEMY Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas mendocina
(strain ymp) GN=hemF PE=3 SV=1
Length = 304
Score = 288 bits (737), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 141/277 (50%), Positives = 184/277 (66%), Gaps = 11/277 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG-VM 155
+ D QD +C A+E DG F+ED W RP GGGG +RV+++GA+ EK GVN S V+G +
Sbjct: 12 LLDLQDRICAALEAEDGQALFREDAWQRPAGGGGRTRVIENGALIEKGGVNFSHVFGDSL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP+NP+ PT H N R+F + + P
Sbjct: 72 PPSA-----SAHRPELAGR-GFQALGVSLVIHPENPYVPTSHANVRFFSAEKEGEEP--- 122
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED +++H AC F YPRFK WCD YF++KHRGE R
Sbjct: 123 -VWWFGGGFDLTPYYANEEDCRYWHQVAFDACAPFGAEVYPRFKAWCDRYFHLKHRGEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ I AY+PI+++RK TPF ++ + +Q RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTCFAFMRAIGDAYIQAYLPIVQRRKLTPFGEREREFQAFRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
VEFNLV+DRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 242 VEFNLVFDRGTLFGLQSGGRTESILMSLPPMVRWGYD 278
>sp|A5VWK4|HEM6_PSEP1 Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=hemF PE=3 SV=1
Length = 303
Score = 288 bits (737), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/277 (51%), Positives = 181/277 (65%), Gaps = 11/277 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W R GGGG +RV+ DG + EK GVN S V+G +
Sbjct: 12 LLDLQDRICSALETEDGGARFVEDAWVREAGGGGRTRVIGDGKVIEKGGVNFSHVFGAGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + G
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPYNPHVPTSHANVRFFIAE----KEGEE 121
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED H+H + AC F YPR+K WCD YF++KHRGE R
Sbjct: 122 AVWWFGGGFDLTPYYGNEEDCVHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ I AY+PI+++RKDTP+T Q + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTCFAFIRAIGDAYINAYLPIVQRRKDTPYTPQQREFQEYRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYD 278
>sp|B0KF35|HEM6_PSEPG Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas putida
(strain GB-1) GN=hemF PE=3 SV=1
Length = 303
Score = 288 bits (736), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 181/277 (65%), Gaps = 11/277 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W R GGGG +RV+ DG + EK GVN S V+G +
Sbjct: 12 LLDLQDRICSALETEDGGARFVEDAWVREAGGGGRTRVIGDGKVIEKGGVNFSHVFGAGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + G
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPHNPHVPTSHANVRFF----IAEKEGEE 121
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED H+H + AC F YPR+K WCD YF++KHRGE R
Sbjct: 122 AVWWFGGGFDLTPYYGNEEDCIHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ + AY+PI+++RKDTP+T Q + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTCFAFIRAIGDAYVNAYLPIVQRRKDTPYTPQQREFQEYRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYD 278
>sp|B8GTF9|HEM6_THISH Coproporphyrinogen-III oxidase, aerobic OS=Thioalkalivibrio sp.
(strain HL-EbGR7) GN=hemF PE=3 SV=1
Length = 304
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/272 (50%), Positives = 183/272 (67%), Gaps = 9/272 (3%)
Query: 101 QDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAY 160
QD +CQ I DG G+FKED W+R GGGG SRVL +GA++E+AG+N S V G P +
Sbjct: 18 QDRICQGIAGADGSGEFKEDSWTREEGGGGRSRVLTEGAVFEQAGINFSHVTGASLPPSA 77
Query: 161 RAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWF 220
A + + + F A G+S V+HP+NP+ PT H N R+F + GA WWF
Sbjct: 78 TAHRPELAGRR-----FQATGVSLVIHPRNPYVPTSHANVRFFIAE----KEGAEPIWWF 128
Query: 221 GGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGL 280
GGG DLTP Y +ED H+H K+AC+ F P YPR+K+WCD+YF+++HR E RG+GGL
Sbjct: 129 GGGFDLTPYYGEDEDCVHWHRVAKAACEPFGPEVYPRYKQWCDEYFFLRHRNEPRGVGGL 188
Query: 281 FFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNL 340
FFDDLN++ E +F + + AY+PI+ +RKDTP+ ++ + +Q RRGRYVEFNL
Sbjct: 189 FFDDLNEWGFEKSFAFMRSVGDHYLDAYLPIVARRKDTPYGERERDFQLYRRGRYVEFNL 248
Query: 341 VYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
VYDRGT FGL++GGR ESIL+SLP RW Y+
Sbjct: 249 VYDRGTLFGLQSGGRTESILMSLPPLVRWRYN 280
>sp|Q3KKE0|HEM6_PSEPF Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas fluorescens
(strain Pf0-1) GN=hemF PE=1 SV=1
Length = 304
Score = 287 bits (734), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/277 (51%), Positives = 183/277 (66%), Gaps = 11/277 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W+RP GGGG +RV+++G + EK GVN S V+G +
Sbjct: 12 LLDLQDRICAALETEDGGTRFVEDAWTRPAGGGGRTRVIENGTVIEKGGVNFSHVFGSGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + + P
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPHNPHVPTSHANVRFFIAEKEGEEP--- 122
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED H+H + AC F P YPR+K WCD YF+IKHR E R
Sbjct: 123 -VWWFGGGFDLTPYYGNEEDCIHWHRVAEKACAPFGPDVYPRYKAWCDTYFHIKHRHEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ I AY+PI+++RK+ FT + + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTSFAFMRAIGDAYIDAYLPIVQRRKNDAFTARQREFQEFRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWAYD 278
>sp|B4EZS7|HEM6_PROMH Coproporphyrinogen-III oxidase, aerobic OS=Proteus mirabilis
(strain HI4320) GN=hemF PE=3 SV=1
Length = 302
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/282 (50%), Positives = 179/282 (63%), Gaps = 9/282 (3%)
Query: 92 RFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVV 151
R + QDS+C AIE D F++D W R GGGG +R+L GAI+E+AGVN S V
Sbjct: 8 RVQSFFLSLQDSICHAIENIDQKATFQQDNWQREAGGGGRTRMLTQGAIFEQAGVNFSHV 67
Query: 152 YGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDT 211
YG P + A + S + F A G+S V+HP NP+ PT H N R+F + +
Sbjct: 68 YGDALPASATAHRPELSGRR-----FQAMGVSLVIHPLNPYIPTSHANVRFFIAEKEGED 122
Query: 212 PGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHR 271
P WWFGGG DLTP Y FEEDV H+H KS CD F +Y R+KKWCDDYFY+KHR
Sbjct: 123 P----VWWFGGGFDLTPYYGFEEDVIHWHKVAKSVCDPFSQDYYARYKKWCDDYFYLKHR 178
Query: 272 GERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLR 331
E RG+GGLFFDDLN D + F + AY+PI+EKRK P+ ++ + +Q R
Sbjct: 179 NEPRGVGGLFFDDLNTPDFDHCFEFVQHVGQGYLDAYLPIVEKRKSIPWGERERQFQLYR 238
Query: 332 RGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RGRYVEFNLV+DRGT FGL++GGR ESIL+S+P R+ YD+
Sbjct: 239 RGRYVEFNLVWDRGTLFGLQSGGRTESILMSMPPLVRFAYDY 280
>sp|Q46IN4|HEM6_PROMT Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus
(strain NATL2A) GN=hemF PE=3 SV=1
Length = 348
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/323 (45%), Positives = 196/323 (60%), Gaps = 39/323 (12%)
Query: 76 SDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVL 135
S ++ ++ A++ RAR +K++ + QD +C +E DG GKF E+ W RP GGGG SRVL
Sbjct: 2 SSSQDKANLPANNSRARAKKLVLELQDEICAGLETIDGEGKFLEESWERPEGGGGRSRVL 61
Query: 136 QDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPT 195
+DG I+E+ GVN S V+G P + + + A +FA G S VLHPK+P+ PT
Sbjct: 62 KDGQIFEQGGVNFSEVHGNELPPSIISQRPEAKGHS-----WFATGTSMVLHPKSPYIPT 116
Query: 196 LHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFY 255
+H NYRYFE A WWFGGG DLTP Y + D +HFHS K+ACD D +
Sbjct: 117 VHLNYRYFE---------AGPVWWFGGGADLTPFYPYLSDTRHFHSCHKNACDTIDKDLH 167
Query: 256 PRFKKWCDDYFYIKHRGERRGLGGLFFD-----------------------DLNDY--DQ 290
FK WCD+YF++KHR E RG+GG+F+D +L +Y +
Sbjct: 168 KVFKPWCDEYFFLKHRNETRGVGGIFYDYQDGSGLLYKGQNANGKASKIAKELGEYSLNW 227
Query: 291 EMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGL 350
E L S A C + +P+Y PII+KRK+ F+ + + +Q RRGRY EFNLV+DRGT FGL
Sbjct: 228 ENLFSLAKACGQAFLPSYEPIIKKRKNQSFSTKERDFQLYRRGRYAEFNLVWDRGTIFGL 287
Query: 351 KTGGRIESILVSLPLTARWEYDH 373
+T GR ESIL+SLP ARWEY +
Sbjct: 288 QTNGRTESILMSLPPLARWEYGY 310
>sp|Q1I2G6|HEM6_PSEE4 Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas entomophila
(strain L48) GN=hemF PE=3 SV=1
Length = 303
Score = 286 bits (731), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/277 (51%), Positives = 181/277 (65%), Gaps = 11/277 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W R GGGG +RV+ +G + EK GVN S V+G +
Sbjct: 12 LLDLQDRICSALETEDGGARFVEDAWVRDAGGGGRTRVIGEGKVIEKGGVNFSHVFGAGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + G
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPHNPHVPTSHANVRFF----IAEKEGEE 121
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED H+H + AC F YPR+K WCD YF++KHRGE R
Sbjct: 122 AVWWFGGGFDLTPYYGNEEDCVHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ + AY+PII++RKDTP+T + + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTCFAFMRAIGDAYVDAYLPIIQRRKDTPYTAKQREFQEYRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYD 278
>sp|B7V0Q9|HEM6_PSEA8 Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas aeruginosa
(strain LESB58) GN=hemF PE=3 SV=1
Length = 305
Score = 285 bits (730), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 183/283 (64%), Gaps = 11/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D QD +C A+E DG +F ED W RP GGGG +RV+ DGA+ EK GVN S
Sbjct: 6 AAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSH 65
Query: 151 VYG-VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPK 209
V+G +PP A +A E G F A G+S V+HP+NP PT H N R+F +
Sbjct: 66 VFGDSLPPSA-----SAHRPELAGR-GFQALGVSLVIHPENPHVPTSHANVRFFCAEKEG 119
Query: 210 DTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIK 269
+ P WWFGGG DLTP Y EED H+H + AC F YPR+K+WCD YF++K
Sbjct: 120 EEP----VWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLK 175
Query: 270 HRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQ 329
HR E RG+GGLFFDDLN +D + +F ++ I AY+PI+++RK TPF ++ + +Q
Sbjct: 176 HRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQA 235
Query: 330 LRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
RRGRYVEFNLV+DRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 236 YRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYD 278
>sp|P43898|HEM6_PSEAE Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=hemF PE=3 SV=1
Length = 305
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 183/283 (64%), Gaps = 11/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D QD +C A+E DG +F ED W RP GGGG +RV+ DGA+ EK GVN S
Sbjct: 6 AAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSH 65
Query: 151 VYG-VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPK 209
V+G +PP A +A E G F A G+S V+HP+NP PT H N R+F +
Sbjct: 66 VFGDSLPPSA-----SAHRPELAGR-GFQALGVSLVIHPENPHVPTSHANVRFFCAEKEG 119
Query: 210 DTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIK 269
+ P WWFGGG DLTP Y EED H+H + AC F YPR+K+WCD YF++K
Sbjct: 120 EEP----VWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLK 175
Query: 270 HRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQ 329
HR E RG+GGLFFDDLN +D + +F ++ I AY+PI+++RK TPF ++ + +Q
Sbjct: 176 HRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQA 235
Query: 330 LRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
RRGRYVEFNLV+DRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 236 YRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYD 278
>sp|Q02V57|HEM6_PSEAB Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas aeruginosa
(strain UCBPP-PA14) GN=hemF PE=3 SV=1
Length = 305
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 183/283 (64%), Gaps = 11/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D QD +C A+E DG +F ED W RP GGGG +RV+ DGA+ EK GVN S
Sbjct: 6 AAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSH 65
Query: 151 VYG-VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPK 209
V+G +PP A +A E G F A G+S V+HP+NP PT H N R+F +
Sbjct: 66 VFGDSLPPSA-----SAHRPELAGR-GFQALGVSLVIHPENPHVPTSHANVRFFCAEKEG 119
Query: 210 DTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIK 269
+ P WWFGGG DLTP Y EED H+H + AC F YPR+K+WCD YF++K
Sbjct: 120 EEP----VWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLK 175
Query: 270 HRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQ 329
HR E RG+GGLFFDDLN +D + +F ++ I AY+PI+++RK TPF ++ + +Q
Sbjct: 176 HRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQA 235
Query: 330 LRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
RRGRYVEFNLV+DRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 236 YRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYD 278
>sp|A6UX86|HEM6_PSEA7 Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas aeruginosa
(strain PA7) GN=hemF PE=3 SV=1
Length = 305
Score = 285 bits (729), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 183/283 (64%), Gaps = 11/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D QD +C A+E DG +F ED W RP GGGG +RV+ DGA+ EK GVN S
Sbjct: 6 AAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSH 65
Query: 151 VYG-VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPK 209
V+G +PP A +A E G F A G+S V+HP+NP PT H N R+F +
Sbjct: 66 VFGDSLPPSA-----SAHRPELAGR-GFQALGVSLVIHPENPHVPTSHANVRFFCAEKAG 119
Query: 210 DTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIK 269
+ P WWFGGG DLTP Y EED H+H + AC F YPR+K+WCD YF++K
Sbjct: 120 EEP----VWWFGGGFDLTPYYASEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLK 175
Query: 270 HRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQ 329
HR E RG+GGLFFDDLN +D + +F ++ I AY+PI+++RK TPF ++ + +Q
Sbjct: 176 HRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQA 235
Query: 330 LRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
RRGRYVEFNLV+DRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 236 YRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYD 278
>sp|B1J4A2|HEM6_PSEPW Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas putida
(strain W619) GN=hemF PE=3 SV=1
Length = 303
Score = 285 bits (728), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 142/277 (51%), Positives = 180/277 (64%), Gaps = 11/277 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W R GGGG +RV+ DG + EK GVN S V+G +
Sbjct: 12 LLDLQDRICSALETEDGGARFVEDAWVREAGGGGRTRVIGDGKLIEKGGVNFSHVFGSGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + G
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPHNPHVPTSHANVRFF----IAEKEGEE 121
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED H+H + AC F YPR+K WCD YF+IKHRGE R
Sbjct: 122 AVWWFGGGFDLTPYYGNEEDCIHWHRVAEQACAPFGADVYPRYKAWCDRYFHIKHRGEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++ + +F ++ + AY+PI+++RKDTP+T + + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWGFDTCFAFIRAIGDAYVDAYLPIVQRRKDTPYTAEQREFQEYRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYD 278
>sp|Q0T273|HEM6_SHIF8 Coproporphyrinogen-III oxidase, aerobic OS=Shigella flexneri
serotype 5b (strain 8401) GN=hemF PE=3 SV=1
Length = 299
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/280 (50%), Positives = 183/280 (65%), Gaps = 10/280 (3%)
Query: 94 EKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG 153
++ + + QD++CQ + DG +F ED W R GGGG SRVL++G ++E+AGVN S V+G
Sbjct: 9 KQFLLNLQDTICQQLTAVDGA-EFVEDSWQREAGGGGRSRVLRNGGVFEQAGVNFSHVHG 67
Query: 154 VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPG 213
EA A+ A E G F A G+S V+HP NP+ PT H N R+F + PG
Sbjct: 68 ----EAMPASATAHRPELAGR-SFEAMGVSLVVHPHNPYVPTSHANVRFFIAE----KPG 118
Query: 214 APRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGE 273
A WWFGGG DLTP Y FEED H+H T + C F YPR+KKWCDDYFY+KHR E
Sbjct: 119 AEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCQPFGEDVYPRYKKWCDDYFYLKHRNE 178
Query: 274 RRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRG 333
+RG+GGLFFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 179 QRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238
Query: 334 RYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RYVEFNLV+DRGT FGL+TGGR ESIL+S+P RWEYD+
Sbjct: 239 RYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDY 278
>sp|Q83QN1|HEM6_SHIFL Coproporphyrinogen-III oxidase, aerobic OS=Shigella flexneri
GN=hemF PE=3 SV=1
Length = 299
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/280 (50%), Positives = 183/280 (65%), Gaps = 10/280 (3%)
Query: 94 EKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG 153
++ + + QD++CQ + DG +F ED W R GGGG SRVL++G ++E+AGVN S V+G
Sbjct: 9 KQFLLNLQDTICQQLTAVDGA-EFVEDSWQREAGGGGRSRVLRNGGVFEQAGVNFSHVHG 67
Query: 154 VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPG 213
EA A+ A E G F A G+S V+HP NP+ PT H N R+F + PG
Sbjct: 68 ----EAMPASATAHRPELAGR-SFEAMGVSLVVHPHNPYVPTSHANVRFFIAE----KPG 118
Query: 214 APRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGE 273
A WWFGGG DLTP Y FEED H+H T + C F YPR+KKWCDDYFY+KHR E
Sbjct: 119 AEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCQPFGEDVYPRYKKWCDDYFYLKHRNE 178
Query: 274 RRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRG 333
+RG+GGLFFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 179 QRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238
Query: 334 RYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RYVEFNLV+DRGT FGL+TGGR ESIL+S+P RWEYD+
Sbjct: 239 RYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDY 278
>sp|B1JSJ6|HEM6_YERPY Coproporphyrinogen-III oxidase, aerobic OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=hemF
PE=3 SV=1
Length = 309
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 178/283 (62%), Gaps = 9/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + QD++C A+ + DG +F E+ W R GGGG SRVL +GA++E+AGVN S
Sbjct: 7 ALIKTYLLTLQDNICAALAQADGHAEFTEECWVREEGGGGRSRVLVNGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G M P A A A + F A G+S V+HP NP+ PT H N R+F +
Sbjct: 67 VSGAMLP-----ASATAHRPELAGRSFQALGVSLVIHPLNPYLPTSHANVRFFIAE---- 117
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
PG WWFGGG DLTP Y FEED H+H S C F YPR+KKWCDDYFYIKH
Sbjct: 118 KPGEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN D +F + + AY+PI+ +RK + D+ + +Q
Sbjct: 178 RQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RRGRYVEFNLV+DRGT FGL+TGGR ESIL+SLP RWEY++
Sbjct: 238 RRGRYVEFNLVWDRGTLFGLQTGGRTESILMSLPPLVRWEYNY 280
>sp|Q668I6|HEM6_YERPS Coproporphyrinogen-III oxidase, aerobic OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=hemF
PE=3 SV=1
Length = 309
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 178/283 (62%), Gaps = 9/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + QD++C A+ + DG +F E+ W R GGGG SRVL +GA++E+AGVN S
Sbjct: 7 ALIKTYLLTLQDNICAALAQADGHAEFTEECWVREEGGGGRSRVLVNGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G M P A A A + F A G+S V+HP NP+ PT H N R+F +
Sbjct: 67 VSGAMLP-----ASATAHRPELAGRSFQALGVSLVIHPLNPYLPTSHANVRFFIAE---- 117
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
PG WWFGGG DLTP Y FEED H+H S C F YPR+KKWCDDYFYIKH
Sbjct: 118 KPGEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN D +F + + AY+PI+ +RK + D+ + +Q
Sbjct: 178 RQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RRGRYVEFNLV+DRGT FGL+TGGR ESIL+SLP RWEY++
Sbjct: 238 RRGRYVEFNLVWDRGTLFGLQTGGRTESILMSLPPLVRWEYNY 280
>sp|A4TMK2|HEM6_YERPP Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis (strain
Pestoides F) GN=hemF PE=3 SV=1
Length = 309
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 178/283 (62%), Gaps = 9/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + QD++C A+ + DG +F E+ W R GGGG SRVL +GA++E+AGVN S
Sbjct: 7 ALIKTYLLTLQDNICAALAQADGHAEFTEECWVREEGGGGRSRVLVNGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G M P A A A + F A G+S V+HP NP+ PT H N R+F +
Sbjct: 67 VSGAMLP-----ASATAHRPELAGRSFQALGVSLVIHPLNPYLPTSHANVRFFIAE---- 117
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
PG WWFGGG DLTP Y FEED H+H S C F YPR+KKWCDDYFYIKH
Sbjct: 118 KPGEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN D +F + + AY+PI+ +RK + D+ + +Q
Sbjct: 178 RQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RRGRYVEFNLV+DRGT FGL+TGGR ESIL+SLP RWEY++
Sbjct: 238 RRGRYVEFNLVWDRGTLFGLQTGGRTESILMSLPPLVRWEYNY 280
>sp|Q1CJZ7|HEM6_YERPN Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=hemF PE=3 SV=1
Length = 309
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 178/283 (62%), Gaps = 9/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + QD++C A+ + DG +F E+ W R GGGG SRVL +GA++E+AGVN S
Sbjct: 7 ALIKTYLLTLQDNICAALAQADGHAEFTEECWVREEGGGGRSRVLVNGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G M P A A A + F A G+S V+HP NP+ PT H N R+F +
Sbjct: 67 VSGAMLP-----ASATAHRPELAGRSFQALGVSLVIHPLNPYLPTSHANVRFFIAE---- 117
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
PG WWFGGG DLTP Y FEED H+H S C F YPR+KKWCDDYFYIKH
Sbjct: 118 KPGEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN D +F + + AY+PI+ +RK + D+ + +Q
Sbjct: 178 RQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RRGRYVEFNLV+DRGT FGL+TGGR ESIL+SLP RWEY++
Sbjct: 238 RRGRYVEFNLVWDRGTLFGLQTGGRTESILMSLPPLVRWEYNY 280
>sp|A9QZK6|HEM6_YERPG Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis bv.
Antiqua (strain Angola) GN=hemF PE=3 SV=1
Length = 309
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 178/283 (62%), Gaps = 9/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + QD++C A+ + DG +F E+ W R GGGG SRVL +GA++E+AGVN S
Sbjct: 7 ALIKTYLLTLQDNICAALAQADGHAEFTEECWVREEGGGGRSRVLVNGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G M P A A A + F A G+S V+HP NP+ PT H N R+F +
Sbjct: 67 VSGAMLP-----ASATAHRPELAGRSFQALGVSLVIHPLNPYLPTSHANVRFFIAE---- 117
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
PG WWFGGG DLTP Y FEED H+H S C F YPR+KKWCDDYFYIKH
Sbjct: 118 KPGEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN D +F + + AY+PI+ +RK + D+ + +Q
Sbjct: 178 RQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RRGRYVEFNLV+DRGT FGL+TGGR ESIL+SLP RWEY++
Sbjct: 238 RRGRYVEFNLVWDRGTLFGLQTGGRTESILMSLPPLVRWEYNY 280
>sp|Q8ZCF9|HEM6_YERPE Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis GN=hemF
PE=3 SV=1
Length = 309
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 178/283 (62%), Gaps = 9/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + QD++C A+ + DG +F E+ W R GGGG SRVL +GA++E+AGVN S
Sbjct: 7 ALIKTYLLTLQDNICAALAQADGHAEFTEECWVREEGGGGRSRVLVNGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G M P A A A + F A G+S V+HP NP+ PT H N R+F +
Sbjct: 67 VSGAMLP-----ASATAHRPELAGRSFQALGVSLVIHPLNPYLPTSHANVRFFIAE---- 117
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
PG WWFGGG DLTP Y FEED H+H S C F YPR+KKWCDDYFYIKH
Sbjct: 118 KPGEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN D +F + + AY+PI+ +RK + D+ + +Q
Sbjct: 178 RQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RRGRYVEFNLV+DRGT FGL+TGGR ESIL+SLP RWEY++
Sbjct: 238 RRGRYVEFNLVWDRGTLFGLQTGGRTESILMSLPPLVRWEYNY 280
>sp|B2K962|HEM6_YERPB Coproporphyrinogen-III oxidase, aerobic OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=hemF
PE=3 SV=1
Length = 309
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 178/283 (62%), Gaps = 9/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + QD++C A+ + DG +F E+ W R GGGG SRVL +GA++E+AGVN S
Sbjct: 7 ALIKTYLLTLQDNICAALAQADGHAEFTEECWVREEGGGGRSRVLVNGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G M P A A A + F A G+S V+HP NP+ PT H N R+F +
Sbjct: 67 VSGAMLP-----ASATAHRPELAGRSFQALGVSLVIHPLNPYLPTSHANVRFFIAE---- 117
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
PG WWFGGG DLTP Y FEED H+H S C F YPR+KKWCDDYFYIKH
Sbjct: 118 KPGEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN D +F + + AY+PI+ +RK + D+ + +Q
Sbjct: 178 RQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RRGRYVEFNLV+DRGT FGL+TGGR ESIL+SLP RWEY++
Sbjct: 238 RRGRYVEFNLVWDRGTLFGLQTGGRTESILMSLPPLVRWEYNY 280
>sp|Q1C5T7|HEM6_YERPA Coproporphyrinogen-III oxidase, aerobic OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=hemF PE=3 SV=1
Length = 309
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 178/283 (62%), Gaps = 9/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + QD++C A+ + DG +F E+ W R GGGG SRVL +GA++E+AGVN S
Sbjct: 7 ALIKTYLLTLQDNICAALAQADGHAEFTEECWVREEGGGGRSRVLVNGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G M P A A A + F A G+S V+HP NP+ PT H N R+F +
Sbjct: 67 VSGAMLP-----ASATAHRPELAGRSFQALGVSLVIHPLNPYLPTSHANVRFFIAE---- 117
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
PG WWFGGG DLTP Y FEED H+H S C F YPR+KKWCDDYFYIKH
Sbjct: 118 KPGEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN D +F + + AY+PI+ +RK + D+ + +Q
Sbjct: 178 RQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RRGRYVEFNLV+DRGT FGL+TGGR ESIL+SLP RWEY++
Sbjct: 238 RRGRYVEFNLVWDRGTLFGLQTGGRTESILMSLPPLVRWEYNY 280
>sp|Q88RQ6|HEM6_PSEPK Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas putida
(strain KT2440) GN=hemF PE=3 SV=1
Length = 303
Score = 284 bits (727), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 141/277 (50%), Positives = 181/277 (65%), Gaps = 11/277 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W R GGGG +RV+ +G + EK GVN S V+G +
Sbjct: 12 LLDLQDRICSALETEDGGARFVEDAWVREAGGGGRTRVIGEGNVIEKGGVNFSHVFGSGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + G
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPHNPHVPTSHANVRFF----IAEKEGEE 121
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED H+H + AC F YPR+K WCD YF++KHRGE R
Sbjct: 122 AVWWFGGGFDLTPYYGNEEDCIHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ + AY+PI+++RK+TP+T Q + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTCFAFIRAIGDAFVDAYLPIVQRRKNTPYTPQQREFQEYRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYD 278
>sp|Q4KKQ4|HEM6_PSEF5 Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas fluorescens
(strain Pf-5 / ATCC BAA-477) GN=hemF PE=3 SV=1
Length = 305
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/277 (50%), Positives = 180/277 (64%), Gaps = 11/277 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W+RP GGGG +RV+ DGA+ EK GVN S V+G +
Sbjct: 12 LLDLQDRICAALETEDGGARFIEDAWTRPAGGGGRTRVIGDGAVIEKGGVNFSHVFGSGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + + P
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPHNPHVPTSHANVRFFIAEKEGEEP--- 122
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y +D H+H + AC F YPR+K WCD YF+IKHR E R
Sbjct: 123 -VWWFGGGFDLTPYYGNIDDCVHWHRVAERACAPFGADVYPRYKAWCDSYFHIKHRNEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ I AY+PI+++RK +T Q + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTSFAFMRAIGDAYIEAYLPIVQRRKAAAYTAQQREFQEFRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYD 278
>sp|Q5X5U7|HEM6_LEGPA Coproporphyrinogen-III oxidase, aerobic OS=Legionella pneumophila
(strain Paris) GN=hemF PE=3 SV=1
Length = 311
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/281 (48%), Positives = 178/281 (63%), Gaps = 9/281 (3%)
Query: 92 RFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVV 151
+ + + Q+++C +E DG +F ED W R GGGG +R++ +G ++EKAGVN S V
Sbjct: 14 QIKSYLLQLQNTICVLLESIDGKTRFHEDSWQRAAGGGGRTRIMTNGNVFEKAGVNFSHV 73
Query: 152 YGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDT 211
G P A A+A E+ F A G+S V+HP+NP+ PT H N R+F +
Sbjct: 74 SGEQLP-----ASASAHREELAGRHFSALGVSLVIHPQNPYVPTTHANVRFFVAEKEDSE 128
Query: 212 PGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHR 271
P WWFGGG DLTP Y F ED +H+H T +AC F T YP+FK+WCDDYF+IKHR
Sbjct: 129 P----VWWFGGGFDLTPYYGFVEDCEHWHQTALNACLPFGETIYPKFKRWCDDYFFIKHR 184
Query: 272 GERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLR 331
E RG+GGLFFDD N+ + + I AY PI+ +RKD PF ++ KA+Q R
Sbjct: 185 NEARGIGGLFFDDYNEISFDHSFELMRSIGDHFILAYEPIVARRKDIPFGNREKAFQNYR 244
Query: 332 RGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYD 372
RGRY EFNLVYDRGT FGL++GGR ESIL+SLP T WEY+
Sbjct: 245 RGRYAEFNLVYDRGTLFGLQSGGRTESILMSLPPTVHWEYN 285
>sp|B7N626|HEM6_ECOLU Coproporphyrinogen-III oxidase, aerobic OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=hemF PE=3 SV=1
Length = 299
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/280 (50%), Positives = 183/280 (65%), Gaps = 10/280 (3%)
Query: 94 EKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG 153
++ + + QD++CQ + DG +F ED W R GGGG SRVL++G ++E+AGVN S V+G
Sbjct: 9 KQFLLNLQDTICQQLSAVDGA-EFVEDSWQREAGGGGRSRVLRNGGVFEQAGVNFSHVHG 67
Query: 154 VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPG 213
EA A+ A E G F A GIS V+HP NP+ PT H N R+F + PG
Sbjct: 68 ----EAMPASATAHRPELAGR-SFEAMGISLVVHPHNPYVPTSHANVRFFIAE----KPG 118
Query: 214 APRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGE 273
A WWFGGG DLTP Y FEED H+H T + C F YPR+KKWCD+YFY+KHR E
Sbjct: 119 AEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCQPFGEDVYPRYKKWCDEYFYLKHRNE 178
Query: 274 RRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRG 333
+RG+GGLFFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 179 QRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTNAYLPIVERRKAMAYGERERNFQLYRRG 238
Query: 334 RYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RYVEFNLV+DRGT FGL+TGGR ESIL+S+P RWEYD+
Sbjct: 239 RYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDY 278
>sp|Q32DB7|HEM6_SHIDS Coproporphyrinogen-III oxidase, aerobic OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=hemF PE=3 SV=1
Length = 299
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/280 (50%), Positives = 183/280 (65%), Gaps = 10/280 (3%)
Query: 94 EKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG 153
++ + + QD++CQ + DG +F ED W R GGGG SRVL++G ++E+AGVN S V+G
Sbjct: 9 KQFLLNLQDTICQQLTAVDGA-EFVEDSWQRESGGGGRSRVLRNGGVFEQAGVNFSHVHG 67
Query: 154 VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPG 213
EA A+ A E G F A G+S V+HP NP+ PT H N R+F + PG
Sbjct: 68 ----EAMPASATAHRPELAGR-SFEAMGVSLVVHPHNPYVPTSHANVRFFIAE----KPG 118
Query: 214 APRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGE 273
A WWFGGG DLTP Y FEED H+H T + C F YPR+KKWCDDYFY+KHR E
Sbjct: 119 AEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDDYFYLKHRNE 178
Query: 274 RRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRG 333
+RG+GGLFFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 179 QRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYAERERNFQLYRRG 238
Query: 334 RYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RYVEFNLV+DRGT FGL+TGGR ESIL+S+P RWEYD+
Sbjct: 239 RYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDY 278
>sp|A7FG82|HEM6_YERP3 Coproporphyrinogen-III oxidase, aerobic OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=hemF PE=3 SV=1
Length = 309
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/283 (50%), Positives = 178/283 (62%), Gaps = 9/283 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + QD++C A+ + DG +F E+ W R GGGG SRVL +GA++E+AGVN S
Sbjct: 7 ALIKTYLLTLQDNICGALAQADGHAEFTEECWVREEGGGGRSRVLVNGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G M P A A A + F A G+S V+HP NP+ PT H N R+F +
Sbjct: 67 VSGAMLP-----ASATAHRPELAGRSFQALGVSLVIHPLNPYLPTSHANVRFFIAE---- 117
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
PG WWFGGG DLTP Y FEED H+H S C F YPR+KKWCDDYFYIKH
Sbjct: 118 KPGEDAVWWFGGGFDLTPYYGFEEDAIHWHQVAHSLCQPFGEQIYPRYKKWCDDYFYIKH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN D +F + + AY+PI+ +RK + D+ + +Q
Sbjct: 178 RQEARGIGGLFFDDLNSPDFMTCFNFTQAVGDGFLAAYMPIVARRKALGWGDRERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
RRGRYVEFNLV+DRGT FGL+TGGR ESIL+SLP RWEY++
Sbjct: 238 RRGRYVEFNLVWDRGTLFGLQTGGRTESILMSLPPLVRWEYNY 280
>sp|B1LMN0|HEM6_ECOSM Coproporphyrinogen-III oxidase, aerobic OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=hemF PE=3 SV=1
Length = 299
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 183/281 (65%), Gaps = 12/281 (4%)
Query: 94 EKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG 153
++ + + QD++CQ + DG +F ED W R GGGG SRVL++G ++E+AGVN S V+G
Sbjct: 9 KQFLLNLQDTICQQLSAVDGA-EFVEDSWLREAGGGGRSRVLRNGGVFEQAGVNFSHVHG 67
Query: 154 -VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTP 212
VMP A A A + F A G+S V+HP NP+ PT H N R+F + P
Sbjct: 68 EVMP------ASATAHRPELAGRSFEAMGVSLVVHPHNPYVPTSHANVRFFIAE----KP 117
Query: 213 GAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRG 272
GA WWFGGG DLTP Y FEED H+H T + C F YPR+KKWCD+YFY+KHR
Sbjct: 118 GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCQPFGEDVYPRYKKWCDEYFYLKHRN 177
Query: 273 ERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRR 332
E+RG+GGLFFDDLN D + +F AY+PI+E+RK + ++ + +Q RR
Sbjct: 178 EQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTNAYLPIVERRKTMAYGERERNFQLYRR 237
Query: 333 GRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDH 373
GRYVEFNLV+DRGT FGL+TGGR ESIL+S+P RWEYD+
Sbjct: 238 GRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDY 278
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,238,391
Number of Sequences: 539616
Number of extensions: 8292699
Number of successful extensions: 19306
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 18270
Number of HSP's gapped (non-prelim): 401
length of query: 431
length of database: 191,569,459
effective HSP length: 120
effective length of query: 311
effective length of database: 126,815,539
effective search space: 39439632629
effective search space used: 39439632629
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)