Query 014082
Match_columns 431
No_of_seqs 186 out of 765
Neff 3.5
Searched_HMMs 46136
Date Fri Mar 29 01:41:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014082.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014082hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1518 Coproporphyrinogen III 100.0 2E-149 4E-154 1086.2 30.1 375 9-431 2-382 (382)
2 PRK05330 coproporphyrinogen II 100.0 6E-147 1E-151 1073.6 33.7 297 87-431 4-300 (300)
3 PF01218 Coprogen_oxidas: Copr 100.0 7E-148 1E-152 1078.8 13.2 296 91-431 1-296 (296)
4 COG0408 HemF Coproporphyrinoge 100.0 3E-145 6E-150 1046.4 28.6 300 86-431 3-303 (303)
5 PLN02873 coproporphyrinogen-II 100.0 6E-139 1E-143 1006.1 29.6 271 125-431 1-274 (274)
6 PF05936 DUF876: Bacterial pro 30.6 91 0.002 32.7 5.3 110 93-205 276-390 (425)
7 PHA02087 hypothetical protein 29.4 40 0.00087 28.4 2.0 23 272-300 60-82 (83)
8 PF03288 Pox_D5: Poxvirus D5 p 29.0 28 0.00061 27.9 1.1 14 252-265 25-38 (86)
9 PF04681 Bys1: Blastomyces yea 27.1 1.7E+02 0.0037 27.7 5.9 23 173-197 96-118 (155)
10 TIGR03807 RR_fam_repeat putati 25.6 39 0.00084 23.5 1.1 11 333-343 9-19 (27)
11 PF14226 DIOX_N: non-haem diox 25.4 30 0.00064 28.7 0.6 42 225-269 5-56 (116)
12 cd02901 Macro_Poa1p_like Macro 23.3 56 0.0012 28.3 1.9 19 246-265 36-54 (140)
13 PF12138 Spherulin4: Spherulat 21.8 75 0.0016 31.5 2.7 48 255-304 83-132 (253)
14 COG1949 Orn Oligoribonuclease 21.3 24 0.00053 34.0 -0.7 21 241-261 135-155 (184)
No 1
>KOG1518 consensus Coproporphyrinogen III oxidase CPO/HEM13 [Coenzyme transport and metabolism]
Probab=100.00 E-value=2e-149 Score=1086.17 Aligned_cols=375 Identities=62% Similarity=1.087 Sum_probs=340.1
Q ss_pred ccccceeeeecCcc---cccccCCCccccccCcccCCCCCCCcceeeeeccccccCCCCCCCCCCccccCCC-CccCCCC
Q 014082 9 ASSSFTLFRVPSSW---STKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRAAVSIEKETPETERPPTFLRESD-DKESSSS 84 (431)
Q Consensus 9 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~ 84 (431)
|+||++|..++.-+ ++++.-+++. . .-+.+ .-+.+++++.++. +|+++++..+.| |+.+++ |...+..
T Consensus 2 ~rh~~~l~s~gtfq~~~~~rg~~srg~-~---lgtgl-~~~~~~~~ah~~~-ai~pkv~gt~~~--fm~~~~sD~~~l~~ 73 (382)
T KOG1518|consen 2 ARHSSTLLSSGTFQPFSSHRGHYSRGS-T---LGTGL-PIRNKPNLAHRCS-AIEPKVPGTERP--FMAPPDSDDVTLPS 73 (382)
T ss_pred CccccCCcCCCcccccccccCCCCCCc-c---cccCc-ccccccchhhhhh-hhcCCCCCcccc--cccCCCCCcccCCC
Confidence 56788887776555 5555555552 1 12222 2233556665555 499999998888 555554 4556677
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeecccccCCCCCceEEEeeCCceEEeeeeEEEEEeccCCHHHHHHcc
Q 014082 85 SASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAK 164 (431)
Q Consensus 85 ~~~~~r~~~e~~~~~LQ~~Ic~~lE~ldg~~~F~~D~W~R~~GGGG~s~Vl~dG~VFEKaGVN~S~V~G~lpp~aa~~~~ 164 (431)
...+||++||.+|++.|++||++||++|++.+|.+|.|+|++||||||||||||+||||||||||+|+|.|||+|+++|+
T Consensus 74 ~~~~ir~~mE~lI~~~Qaevc~aleaidgg~kF~~D~W~r~eGGgGiscVlQDG~vFEKaGVnvSVV~G~l~p~Av~~mr 153 (382)
T KOG1518|consen 74 SSSSIRAQMETLIREAQAEVCQALEAIDGGQKFKVDRWTRGEGGGGISCVLQDGNVFEKAGVNVSVVYGVLPPEAVQAMR 153 (382)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhccccccceeeeecCCCCCceEEEEccCCeeecCCceEEEEeccCCHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCC-CCCCeEEeeeEEEecCCCCCCCceeceeeEEEecCCCCCCCCCCcceecccCCCCCCCCChhhHHHHHHHH
Q 014082 165 AAASDEKP-GPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQ 243 (431)
Q Consensus 165 ~~~~~~~~-~~~~F~AtGISlViHPrNP~vPTvH~N~RyFe~~~~~~~~g~~~~wWFGGG~DLTP~Y~~eEDa~hFH~~l 243 (431)
++++..+. +.+||||+|||+||||+|||+||+|+||||||+ .+.+|. ++||||||+||||+|++|||++|||+++
T Consensus 154 a~~k~lk~~~~lpFfA~GvS~ViHP~NPhaPT~HfNYRYFE~---~~~dg~-kqWWFGGG~DlTPsyl~eeD~~hFH~~~ 229 (382)
T KOG1518|consen 154 ARHKNLKPTGPLPFFAAGVSSVIHPKNPHAPTTHFNYRYFET---ENADGV-KQWWFGGGADLTPSYLFEEDGKHFHQLH 229 (382)
T ss_pred hcccCCCCCCCCceeeccceeeeccCCCCCCceeeeeeEEEE---ecCCCc-EEEEecCCccCChhhhhhhhHHHHHHHH
Confidence 99986544 789999999999999999999999999999999 455665 8899999999999999999999999999
Q ss_pred HHhhhcCCCCchHHHHHHhhhhcCcCcCCCcCccceeeccCCCCcChhHHHHHHHHHHhhhhhhcHHHHHHhCCCCCCHH
Q 014082 244 KSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQ 323 (431)
Q Consensus 244 K~aCD~~~~~~Yp~fKkwCDeYFyIpHR~E~RGIGGIFFDdLn~~~~e~~faFv~~vg~afl~aYlPIv~rr~~~pyte~ 323 (431)
|+|||+|||++||+||||||+||||+||+|+|||||||||||++.|.|+.|+|+++|+++|+|+|+|||+|||+++||++
T Consensus 230 K~AcD~hdp~~YPrFKKWcDdYF~IkHR~E~RGiGGIFFDDld~~d~ee~f~fv~~Ca~avvPsYipiv~krkdmeft~~ 309 (382)
T KOG1518|consen 230 KEACDKHDPTFYPRFKKWCDDYFYIKHRKERRGIGGIFFDDLDEPDPEELFSFVTDCARAVVPSYIPIVEKRKDMEFTEQ 309 (382)
T ss_pred HHHhhccCCccchhHHhhhhhheeeeeccccccccceecccCCCCCHHHHHHHHHHHHHhhccccchhhhhhcCCCcChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcccceeEEEEeeeccceecccc-CCceeeeeeeCCCcccccccccccccccCccccccccccccCCCCCcccc
Q 014082 324 HKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFF 402 (431)
Q Consensus 324 er~wQl~RRGRYVEFNLvyDRGTkFGL~T-ggRiESILmSLPp~a~W~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (431)
||+||+|||||||||||+|||||+|||+| |.||||||||||.+|+|+|||
T Consensus 310 ek~wQ~lRRGrYvEFNliYDRGT~FGL~tpgsRiESILmsLPlha~w~y~h----------------------------- 360 (382)
T KOG1518|consen 310 EKQWQQLRRGRYVEFNLIYDRGTKFGLKTPGSRIESILMSLPLHASWEYMH----------------------------- 360 (382)
T ss_pred HHHHHHHhccceEEEEEEEecCceeeccCCcchhHhHhhcccchhhhhhhc-----------------------------
Confidence 99999999999999999999999999999 669999999999999999999
Q ss_pred ccccccCCCCCCCHHHHHHHHhcCCCCCC
Q 014082 403 FSLFSMQNPKEGSEEWKLLDACINPKEWI 431 (431)
Q Consensus 403 ~~~~~~~~p~~gs~E~~l~~~l~~PrdWv 431 (431)
.|.+||+|++||+|+.+|||||
T Consensus 361 -------~P~~~sre~~ll~V~~~P~eWv 382 (382)
T KOG1518|consen 361 -------EPKQGSREAKLLEVTHTPREWV 382 (382)
T ss_pred -------CCCCcchhhHHHHhhcCCcccC
Confidence 9999999999999999999997
No 2
>PRK05330 coproporphyrinogen III oxidase; Provisional
Probab=100.00 E-value=5.9e-147 Score=1073.61 Aligned_cols=297 Identities=53% Similarity=1.029 Sum_probs=287.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeecccccCCCCCceEEEeeCCceEEeeeeEEEEEeccCCHHHHHHcccc
Q 014082 87 SSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAA 166 (431)
Q Consensus 87 ~~~r~~~e~~~~~LQ~~Ic~~lE~ldg~~~F~~D~W~R~~GGGG~s~Vl~dG~VFEKaGVN~S~V~G~lpp~aa~~~~~~ 166 (431)
.++++++++||+.||++||++||++|++++|++|.|+|++||||+||||+||+||||||||||+|+|+++|+++++++++
T Consensus 4 ~~~~~~~~~~~~~lQ~~Ic~~lE~~dg~~~F~~d~W~R~~GGGG~~~vl~~G~VfEK~gVN~S~V~G~~~p~~~~~~~~~ 83 (300)
T PRK05330 4 EPDKARVKAWLLGLQDRICAALEALDGEARFVEDSWQRPEGGGGRSRVLENGRVFEKAGVNFSHVHGEFLPPSATAHRPE 83 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeEeccccCCCCCceEEEEeCCcEEEecceEEEEEecCCCHHHHHHhccC
Confidence 35789999999999999999999999888999999999999999999999999999999999999999999999999876
Q ss_pred ccCCCCCCCCeEEeeeEEEecCCCCCCCceeceeeEEEecCCCCCCCCCCcceecccCCCCCCCCChhhHHHHHHHHHHh
Q 014082 167 ASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSA 246 (431)
Q Consensus 167 ~~~~~~~~~~F~AtGISlViHPrNP~vPTvH~N~RyFe~~~~~~~~g~~~~wWFGGG~DLTP~Y~~eEDa~hFH~~lK~a 246 (431)
. .+.+|+||||||||||+||||||||||||||++. ++|. .||||||+||||+|+++||++|||+++|++
T Consensus 84 ~-----~g~~f~A~GiSlViHP~NP~vPtvH~N~R~f~~~----~~g~--~wWFGGG~DLTP~y~~~eD~~~FH~~~K~~ 152 (300)
T PRK05330 84 L-----AGRSFEATGVSLVAHPRNPYVPTVHMNVRFFIAT----KPGP--VWWFGGGFDLTPYYPFEEDAVHFHRTAKDA 152 (300)
T ss_pred C-----CCCCeEEEeeeEEEecCCCCCCceeeEEEEEEEc----cCCC--ceeecCCccCCCCCCChHHHHHHHHHHHHH
Confidence 4 3688999999999999999999999999999982 2343 799999999999999999999999999999
Q ss_pred hhcCCCCchHHHHHHhhhhcCcCcCCCcCccceeeccCCCCcChhHHHHHHHHHHhhhhhhcHHHHHHhCCCCCCHHHHH
Q 014082 247 CDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKA 326 (431)
Q Consensus 247 CD~~~~~~Yp~fKkwCDeYFyIpHR~E~RGIGGIFFDdLn~~~~e~~faFv~~vg~afl~aYlPIv~rr~~~pyte~er~ 326 (431)
||+||+++||+||+|||+|||||||+|+||||||||||||+.++|++|+|+++||++||++|+|||+||+++|||++||+
T Consensus 153 Cd~~~~~~Y~~fK~wCD~YFyi~HR~E~RGvGGiFfD~l~~~~~e~~f~F~~~vg~~fl~aY~pIv~rr~~~~~te~er~ 232 (300)
T PRK05330 153 CDPFGPEYYPRFKKWCDEYFYLKHRNEPRGVGGIFFDDLNSPGFERDFAFTQAVGDAFLDAYLPIVERRKDTPYGERERE 232 (300)
T ss_pred HhccChhhhHHHHHHHHHhcChhhcCCCCCCCeeecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcccceeEEEEeeeccceeccccCCceeeeeeeCCCcccccccccccccccCccccccccccccCCCCCcccccccc
Q 014082 327 WQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLF 406 (431)
Q Consensus 327 wQl~RRGRYVEFNLvyDRGTkFGL~TggRiESILmSLPp~a~W~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (431)
|||+||||||||||||||||+|||+||||||||||||||+|+|+|||
T Consensus 233 ~Ql~rRGRYvEFNLvyDRGT~FGL~t~gr~EsILmSLPp~a~W~Y~~--------------------------------- 279 (300)
T PRK05330 233 FQLYRRGRYVEFNLVYDRGTLFGLQTGGRTESILMSLPPLVRWEYDY--------------------------------- 279 (300)
T ss_pred HHHhhccceEEEEeeeecCcHhhccCCCcceeEEEcCCCCCcccCCC---------------------------------
Confidence 99999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHhcCCCCCC
Q 014082 407 SMQNPKEGSEEWKLLDACINPKEWI 431 (431)
Q Consensus 407 ~~~~p~~gs~E~~l~~~l~~PrdWv 431 (431)
+|++||+|++| ++|++|||||
T Consensus 280 ---~p~~gs~E~~l-~~~~~prdW~ 300 (300)
T PRK05330 280 ---QPEPGSPEARL-SDFLKPRDWL 300 (300)
T ss_pred ---CCCCCCHHHHH-HHhcCCCCCC
Confidence 99999999999 9999999997
No 3
>PF01218 Coprogen_oxidas: Coproporphyrinogen III oxidase; InterPro: IPR001260 Coprogen oxidase (i.e. coproporphyrin III oxidase or coproporphyrinogenase) catalyses the oxidative decarboxylation of coproporphyrinogen III to proto-porhyrinogen IX in the haem and chlorophyll biosynthetic pathways [, ]. The protein is a homodimer containing two internally bound iron atoms per molecule of native protein []. The enzyme is active in the presence of molecular oxygen that acts as an electron acceptor. The enzyme is widely distributed having been found in a variety of eukaryotic and prokaryotic sources.; GO: 0004109 coproporphyrinogen oxidase activity, 0006779 porphyrin-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 3EJO_B 3DWR_B 1VJU_B 2QT8_B 3DWS_A 2AEX_A 1TKL_B 1TK1_A 1TLB_Q 1TXN_A ....
Probab=100.00 E-value=6.5e-148 Score=1078.78 Aligned_cols=296 Identities=61% Similarity=1.168 Sum_probs=262.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeeecccccCCCCCceEEEeeCCceEEeeeeEEEEEeccCCHHHHHHccccccCC
Q 014082 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDE 170 (431)
Q Consensus 91 ~~~e~~~~~LQ~~Ic~~lE~ldg~~~F~~D~W~R~~GGGG~s~Vl~dG~VFEKaGVN~S~V~G~lpp~aa~~~~~~~~~~ 170 (431)
++|++||+.||++||++||++|++++|++|.|+|++||||+||||+||+||||||||||+|+|+++|+++++|+++++
T Consensus 1 ~~~~~~~~~lQ~~I~~~lE~~d~~~~F~~d~W~R~~gGgG~s~vl~~G~VfEKagVN~S~V~G~~~p~~a~~~~~~~~-- 78 (296)
T PF01218_consen 1 QRVEAWFRDLQDRICAALEALDGKAKFKEDEWERPEGGGGRSRVLEDGNVFEKAGVNVSVVHGDLPPAAAKAMRPRLA-- 78 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSSEEEEEEEEETTSEEEEEEEEES-SSEEEEEEEEEEEEEEC-HHHHHHCHSTTT--
T ss_pred ChHHHHHHHHHHHHHHHHHhhcCCCceEEcccccCCCCCceEEEEeCCeEEEecceEEEEEeccCCHHHHHHhhcccC--
Confidence 579999999999999999999988999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCCeEEeeeEEEecCCCCCCCceeceeeEEEecCCCCCCCCCCcceecccCCCCCCCCChhhHHHHHHHHHHhhhcC
Q 014082 171 KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKF 250 (431)
Q Consensus 171 ~~~~~~F~AtGISlViHPrNP~vPTvH~N~RyFe~~~~~~~~g~~~~wWFGGG~DLTP~Y~~eEDa~hFH~~lK~aCD~~ 250 (431)
+.+|+||||||||||+||||||+|||||||.+ +.++....||||||+||||+|+++||++|||+++|++||+|
T Consensus 79 ---~~~f~A~GiSlViHP~NP~vPt~H~N~R~f~~----~~~~~~~~~WFGGG~DLTP~y~~~eD~~~FH~~~K~~cd~~ 151 (296)
T PF01218_consen 79 ---GQPFFATGISLVIHPRNPMVPTVHMNYRYFIA----EKEGKTGQWWFGGGADLTPYYLFEEDAKHFHQTLKEACDPH 151 (296)
T ss_dssp ---TSEEEEEEEEEEEEESSTTS-EEEEEEEEEEE----ECTTSEEEEEEEEEEEEE-SS--HHHHHHHHHHHHHHHGGG
T ss_pred ---CCceEEeccceEeecCCCCCCceeceeeEEee----ccccCccccccccccCCCCCCCCHHHHHHHHHHHHHHHHhc
Confidence 67999999999999999999999999999966 34466678999999999999999999999999999999999
Q ss_pred CCCchHHHHHHhhhhcCcCcCCCcCccceeeccCCCCcChhHHHHHHHHHHhhhhhhcHHHHHHhCCCCCCHHHHHHHHH
Q 014082 251 DPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330 (431)
Q Consensus 251 ~~~~Yp~fKkwCDeYFyIpHR~E~RGIGGIFFDdLn~~~~e~~faFv~~vg~afl~aYlPIv~rr~~~pyte~er~wQl~ 330 (431)
|+++||+||+|||+|||||||+|+||||||||||||+.++|++|+|+++||++||++|+|||+||+++|||++||+|||+
T Consensus 152 ~~~~Yp~fK~wcD~YFyipHR~E~RGiGGIFfD~l~~~~~e~~f~f~~~vg~~fl~aY~pIv~rr~~~~~t~~er~~Ql~ 231 (296)
T PF01218_consen 152 DPSYYPRFKKWCDEYFYIPHRNEHRGIGGIFFDDLNTGDFEKDFAFVKDVGEAFLPAYLPIVERRKDEPYTEEEREWQLY 231 (296)
T ss_dssp -TTHHHHHHHHHHHHSEEGGGTEESSSEEEEEEEE-SS-HHHHHHHHHHHHHHHHHHHHHHHHHHTTS---HHHHHHHHH
T ss_pred ChHHHHHHHhhchhhcchhhcCCCcCCceeeeccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeEEEEeeeccceeccccCCceeeeeeeCCCcccccccccccccccCccccccccccccCCCCCccccccccccCC
Q 014082 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQN 410 (431)
Q Consensus 331 RRGRYVEFNLvyDRGTkFGL~TggRiESILmSLPp~a~W~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (431)
||||||||||||||||+|||+||||||||||||||+|+|+||| +
T Consensus 232 RRGRYvEFNLvyDRGT~FGL~t~gr~EsILmSLPp~a~W~Y~~------------------------------------~ 275 (296)
T PF01218_consen 232 RRGRYVEFNLVYDRGTKFGLQTGGRIESILMSLPPTARWEYDY------------------------------------Q 275 (296)
T ss_dssp HHHHHHHHHHHT-HHHHHHHHTT--HHHHGGGS-SEEE--TT--------------------------------------
T ss_pred hccceEEEEEEeccCceecccCCCchhhhhhcCchhcCccCCC------------------------------------C
Confidence 9999999999999999999999999999999999999999999 9
Q ss_pred CCCCCHHHHHHHHhcCCCCCC
Q 014082 411 PKEGSEEWKLLDACINPKEWI 431 (431)
Q Consensus 411 p~~gs~E~~l~~~l~~PrdWv 431 (431)
|++||+|++|+++|++|||||
T Consensus 276 p~~gs~E~~l~~~~~~prdWv 296 (296)
T PF01218_consen 276 PEPGSPEAELLEVLLKPRDWV 296 (296)
T ss_dssp --TTSHHHHHHHTHHHH----
T ss_pred CCCcCHHHHHHHHhcccCCCC
Confidence 999999999999999999997
No 4
>COG0408 HemF Coproporphyrinogen III oxidase [Coenzyme metabolism]
Probab=100.00 E-value=2.5e-145 Score=1046.36 Aligned_cols=300 Identities=54% Similarity=1.044 Sum_probs=291.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeecccccCCC-CCceEEEeeCCceEEeeeeEEEEEeccCCHHHHHHcc
Q 014082 86 ASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGG-GGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAK 164 (431)
Q Consensus 86 ~~~~r~~~e~~~~~LQ~~Ic~~lE~ldg~~~F~~D~W~R~~G-GGG~s~Vl~dG~VFEKaGVN~S~V~G~lpp~aa~~~~ 164 (431)
..+.++++++||++|||+||++||++|+..+|.+|.|+|++| |||+||||+||+||||+|||||+|+|++.|+++++|+
T Consensus 3 ~~~~~~~~~~~~~~Lqd~Ic~~le~~dg~~~F~~d~W~r~~g~GgG~~~vl~~G~vFEk~GVn~S~V~G~~~P~~~~~~r 82 (303)
T COG0408 3 IEPDKQAVKAWLLNLQDEICAALEALDGEAKFVEDSWQREEGGGGGRSRVLMDGAVFEKGGVNFSTVFGEFSPESATAMR 82 (303)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhhccceEEecccccccCCCCCCeeEEEecCceeeecCceeEEEecccChHHHhhCC
Confidence 457789999999999999999999999989999999999866 9999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCeEEeeeEEEecCCCCCCCceeceeeEEEecCCCCCCCCCCcceecccCCCCCCCCChhhHHHHHHHHH
Q 014082 165 AAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQK 244 (431)
Q Consensus 165 ~~~~~~~~~~~~F~AtGISlViHPrNP~vPTvH~N~RyFe~~~~~~~~g~~~~wWFGGG~DLTP~Y~~eEDa~hFH~~lK 244 (431)
++.+ +..|+|||||||+||+||+|||+|||||||++ .++|+.++||||||+||||+|+++||++|||+++|
T Consensus 83 p~~~-----g~~F~A~GiSlV~HP~NP~vPt~H~N~R~f~a----~~~~~~~vwWFGGGaDLTP~y~~~eD~~hfH~~~k 153 (303)
T COG0408 83 PELA-----GRRFFATGISLVAHPKNPYVPTVHLNVRYFEA----EKPGAEPVWWFGGGADLTPYYGFEEDAVHFHRAAK 153 (303)
T ss_pred chhc-----CCceEeeeeeEEEecCCCCCCceeeeEEEEEE----ecCCCCcceeecCCccCcccccchhHHHHHHHHHH
Confidence 9764 78999999999999999999999999999999 45677899999999999999999999999999999
Q ss_pred HhhhcCCCCchHHHHHHhhhhcCcCcCCCcCccceeeccCCCCcChhHHHHHHHHHHhhhhhhcHHHHHHhCCCCCCHHH
Q 014082 245 SACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQH 324 (431)
Q Consensus 245 ~aCD~~~~~~Yp~fKkwCDeYFyIpHR~E~RGIGGIFFDdLn~~~~e~~faFv~~vg~afl~aYlPIv~rr~~~pyte~e 324 (431)
++||+|++++||+||+|||||||||||+|+|||||||||||++.+++++|+|+++||++||++|+|||+||++++||++|
T Consensus 154 ~aC~~~~~~~YprfK~WCDeYFyLkHR~E~RGiGGiFfD~l~~~~~~~~Faf~qdvG~afl~aY~pIV~~r~~~~~te~e 233 (303)
T COG0408 154 DACDPHGPEDYPRFKKWCDEYFYLKHRNEPRGIGGIFFDDLNEPDFERDFAFTQDVGKAFLPAYLPIVERRKNMPWTERE 233 (303)
T ss_pred HHhcccChhhhhHHHHhhhhheeecccCCCCCcceeecccccCCCHHHHHHHHHHHHHHHhhhhHHHHHHhcCCCCchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcccceeEEEEeeeccceeccccCCceeeeeeeCCCcccccccccccccccCccccccccccccCCCCCcccccc
Q 014082 325 KAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFS 404 (431)
Q Consensus 325 r~wQl~RRGRYVEFNLvyDRGTkFGL~TggRiESILmSLPp~a~W~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (431)
|+||||||||||||||||||||+||||||||+|||||||||+|+|+|+|
T Consensus 234 r~fQl~RRGRYVEFNLvyDRGT~FGLqTgGr~ESILmSlPP~vrW~Y~~------------------------------- 282 (303)
T COG0408 234 REFQLYRRGRYVEFNLVYDRGTLFGLQTGGRVESILMSLPPLVRWEYDY------------------------------- 282 (303)
T ss_pred HHHHHHhccceEEEEEEEeccceEeeccCCchhhhhhcCCccccccCCC-------------------------------
Confidence 9999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHhcCCCCCC
Q 014082 405 LFSMQNPKEGSEEWKLLDACINPKEWI 431 (431)
Q Consensus 405 ~~~~~~p~~gs~E~~l~~~l~~PrdWv 431 (431)
+|++||+||+|+ ++++|||||
T Consensus 283 -----~P~~gs~ea~L~-~fl~prdW~ 303 (303)
T COG0408 283 -----QPEPGSPEAALS-VFLKPRDWV 303 (303)
T ss_pred -----CCCCCCchhhhh-hhcCccccC
Confidence 999999999999 899999997
No 5
>PLN02873 coproporphyrinogen-III oxidase
Probab=100.00 E-value=6.4e-139 Score=1006.06 Aligned_cols=271 Identities=82% Similarity=1.442 Sum_probs=258.7
Q ss_pred CCCCCceEEEeeCCceEEeeeeEEEEEeccCCHHHHHHcccccc---CCCCCCCCeEEeeeEEEecCCCCCCCceeceee
Q 014082 125 PGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAAS---DEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYR 201 (431)
Q Consensus 125 ~~GGGG~s~Vl~dG~VFEKaGVN~S~V~G~lpp~aa~~~~~~~~---~~~~~~~~F~AtGISlViHPrNP~vPTvH~N~R 201 (431)
++||||+||||+||+||||||||||+|||+++|+++++|++++. ....++.+|+||||||||||+||||||+|||||
T Consensus 1 ~~gGGG~t~vl~~G~VfEK~gVN~S~V~G~~~p~~~~~~~~~~~~~~~~~~~~~~f~A~GiSlViHP~NP~vPtvH~N~R 80 (274)
T PLN02873 1 PGGGGGISRVLQDGNVFEKAGVNVSVVYGTMPPEAYRAATGRGSRKGGDPAGGVPFFAAGLSSVMHPKNPMAPTFHFNYR 80 (274)
T ss_pred CCCCCCeEEEEECCeEEEecceEEEEEecCCCHHHHHhhCcccccccccccCCCCeEEEEeeEEEecCCCCCCceeeEEE
Confidence 46899999999999999999999999999999999999998762 112357899999999999999999999999999
Q ss_pred EEEecCCCCCCCCCCcceecccCCCCCCCCChhhHHHHHHHHHHhhhcCCCCchHHHHHHhhhhcCcCcCCCcCccceee
Q 014082 202 YFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLF 281 (431)
Q Consensus 202 yFe~~~~~~~~g~~~~wWFGGG~DLTP~Y~~eEDa~hFH~~lK~aCD~~~~~~Yp~fKkwCDeYFyIpHR~E~RGIGGIF 281 (431)
||++..+..++|..++||||||+||||+|+++||++|||+++|++||+|++++||+||+|||+|||||||+|+|||||||
T Consensus 81 ~fe~~~~~~~~g~~~~wWFGGG~DLTP~y~~~eD~~~FH~~~K~aCd~~~~~~Y~~fK~wCD~YFyi~HR~E~RGvGGiF 160 (274)
T PLN02873 81 YFETDAPKDVPGAPRQWWFGGGTDLTPSYLFEEDVKHFHGTYKDVCDKHDPEFYPRFKKWCDDYFYIKHRGERRGLGGIF 160 (274)
T ss_pred EEEEeccccccCCCCCceecCcccCCCCCCChHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhcchhhcCCCCCCceee
Confidence 99995544456777899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcChhHHHHHHHHHHhhhhhhcHHHHHHhCCCCCCHHHHHHHHHcccceeEEEEeeeccceeccccCCceeeeee
Q 014082 282 FDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILV 361 (431)
Q Consensus 282 FDdLn~~~~e~~faFv~~vg~afl~aYlPIv~rr~~~pyte~er~wQl~RRGRYVEFNLvyDRGTkFGL~TggRiESILm 361 (431)
|||||+.++|++|+|+++||++||+||+|||+||++++||++||+|||+||||||||||||||||+|||+||||||||||
T Consensus 161 fDdln~~~~e~~f~f~~~vg~afl~aY~pIv~rr~~~~~te~er~~Ql~RRGRYvEFNLvyDRGT~FGL~t~gr~EsILm 240 (274)
T PLN02873 161 FDDLNDRDQEDLLAFATDVANSVVPAYLPIVEKRKDDPFTEEQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILV 240 (274)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHhHHHHHHhCCCCCCHHHHHHHHHhCcceEEEEeeeecCchhhccCCCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCcccccccccccccccCccccccccccccCCCCCccccccccccCCCCCCCHHHHHHHHhcCCCCCC
Q 014082 362 SLPLTARWEYDHVSFLEHSGEYASDVTKSLKSWTDEGSFFFFSLFSMQNPKEGSEEWKLLDACINPKEWI 431 (431)
Q Consensus 362 SLPp~a~W~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~gs~E~~l~~~l~~PrdWv 431 (431)
||||+|+|+||| +|++||+|++|+++|++|||||
T Consensus 241 SLPp~a~W~Y~~------------------------------------~p~~gs~E~~l~~~l~~prdW~ 274 (274)
T PLN02873 241 SLPPTARWEYDH------------------------------------QPEEGSEEAELLDALRNPREWV 274 (274)
T ss_pred cCCCCCcccCCC------------------------------------CCCCCCHHHHHHHHhhCCCCCC
Confidence 999999999999 9999999999999999999997
No 6
>PF05936 DUF876: Bacterial protein of unknown function (DUF876); InterPro: IPR010263 This family consists of a series of hypothetical bacterial sequences of unknown function. They are associated with a type VI secretion locus suggesting a possible virulence role [].
Probab=30.55 E-value=91 Score=32.71 Aligned_cols=110 Identities=20% Similarity=0.175 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCeeecccccCCCCCceEEEeeCCceEEeeeeEEEEEeccCCHHHHHH-ccccccCCC
Q 014082 93 FEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRA-AKAAASDEK 171 (431)
Q Consensus 93 ~e~~~~~LQ~~Ic~~lE~ldg~~~F~~D~W~R~~GGGG~s~Vl~dG~VFEKaGVN~S~V~G~lpp~aa~~-~~~~~~~~~ 171 (431)
...=|..|.+.|.+.|+.+- ..+...-.+++. +.|=..+.+.|-.+++++-.=+.+ +++++++-..+ .....|...
T Consensus 276 l~~~F~~l~~~lr~~L~~v~-~~~~~~l~l~~~-~~g~~~~~~~d~~l~~~~~f~LaV-~a~~~~~~l~~~~p~~~Kigs 352 (425)
T PF05936_consen 276 LGPCFSPLFDLLRQLLSEVI-EQPAISLPLEQR-SDGIYVAQLPDSSLLEGARFYLAV-RADMPAEELREQFPQQAKIGS 352 (425)
T ss_pred HHHHHHHHHHHHHHHHHhhc-cCCcEEEEEEEC-CCCEEEEEcCChhhccCceEEEEE-eCCCCHHHHHHHHHhhcEECC
Confidence 34445677788888888773 234555566644 356677888889999888776655 88888874332 222111000
Q ss_pred CCC----CCeEEeeeEEEecCCCCCCCceeceeeEEEe
Q 014082 172 PGP----IPFFAAGISSVLHPKNPFAPTLHFNYRYFET 205 (431)
Q Consensus 172 ~~~----~~F~AtGISlViHPrNP~vPTvH~N~RyFe~ 205 (431)
.+. ..----||-|.-=|+-|-.=.+|.++.||++
T Consensus 353 ~~~i~~Lv~~aLpGi~L~~l~~~P~~lp~~~g~~YF~l 390 (425)
T PF05936_consen 353 PEQIRELVNRALPGIPLQHLPRPPRQLPYRSGYVYFEL 390 (425)
T ss_pred HHHHHHHHHHhCCCCcccccCCCCccCccCCCCEEEEE
Confidence 000 0112458888888999998889999999999
No 7
>PHA02087 hypothetical protein
Probab=29.43 E-value=40 Score=28.45 Aligned_cols=23 Identities=43% Similarity=0.712 Sum_probs=17.9
Q ss_pred CCcCccceeeccCCCCcChhHHHHHHHHH
Q 014082 272 GERRGLGGLFFDDLNDYDQEMLLSFATEC 300 (431)
Q Consensus 272 ~E~RGIGGIFFDdLn~~~~e~~faFv~~v 300 (431)
-|.-|=|||-||| |+.|.|...|
T Consensus 60 pe~~ggggi~fdd------eem~~f~d~v 82 (83)
T PHA02087 60 PESEGGGGITFDD------EEMFHFFDEV 82 (83)
T ss_pred CcccCCCceeecc------HHHHHHHHhh
Confidence 3677889999998 7888876543
No 8
>PF03288 Pox_D5: Poxvirus D5 protein-like; InterPro: IPR004968 This domain is found at the C terminus of phage P4 alpha protein and related proteins. Phage P4 DNA replication depends on the product of the alpha gene, which has origin recognition ability, DNA helicase activity, and DNA primase activity. The structure of the protein can be summarised as follows: The N terminus provides the primase activity, the central region is the helicase/nucleoside triphosphatase domain and the ori DNA recognition resides in the C-terminal 1/3 of the protein []. The domain is also found at the C terminus of a number of proteins from orthopox viruses including vaccinia virus D5. D5 encodes a 90kDa protein that is transiently expressed at early times after infection. It has an nucleoside triphosphatase activity which is independent of common nucleic acid cofactors and it can hydrolyse all the common ribo- and deoxyribonucleoside triphosphates to diphosphates in the presence of a divalent cation [].; PDB: 1KA8_E.
Probab=28.98 E-value=28 Score=27.91 Aligned_cols=14 Identities=29% Similarity=1.120 Sum_probs=12.3
Q ss_pred CCchHHHHHHhhhh
Q 014082 252 PTFYPRFKKWCDDY 265 (431)
Q Consensus 252 ~~~Yp~fKkwCDeY 265 (431)
..+|..||.||++.
T Consensus 25 ~~lY~~Y~~wc~~n 38 (86)
T PF03288_consen 25 KDLYDAYKEWCEEN 38 (86)
T ss_dssp TBHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 46899999999986
No 9
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C. Bys1 is expressed specifically in the high temperature, unicellular yeast morphology and codes for a protein of 18.6 kDa that contains multiple putative phosphorylation sites, a hydrophobic N terminus, and two 34-amino-acid domains with similarly spaced nine-amino-acid degenerative repeating motifs []. The molecular function of this protein is not known.
Probab=27.11 E-value=1.7e+02 Score=27.72 Aligned_cols=23 Identities=26% Similarity=0.483 Sum_probs=18.3
Q ss_pred CCCCeEEeeeEEEecCCCCCCCcee
Q 014082 173 GPIPFFAAGISSVLHPKNPFAPTLH 197 (431)
Q Consensus 173 ~~~~F~AtGISlViHPrNP~vPTvH 197 (431)
.|.||. |=.|+++|.+|.+|.|+
T Consensus 96 fGdPF~--G~~v~v~ps~~~Cp~I~ 118 (155)
T PF04681_consen 96 FGDPFA--GHKVTVNPSDPSCPSIV 118 (155)
T ss_pred cCCCcC--CCEEEEecCCCCCCceE
Confidence 477884 45566799999999998
No 10
>TIGR03807 RR_fam_repeat putative cofactor-binding repeat. This model describes a small repeat found in a family of proteins that crosses the plasma membrane by twin-arginine translation, which usually signifies the presence of a bound cofactor. This repeat shows similarity to the beta-helical repeat, in which three beta-strands per repeat wind once per repeat around in a right-handed helical stack of parallel beta structure.
Probab=25.62 E-value=39 Score=23.52 Aligned_cols=11 Identities=45% Similarity=0.839 Sum_probs=8.8
Q ss_pred cceeEEEEeee
Q 014082 333 GRYVEFNLVYD 343 (431)
Q Consensus 333 GRYVEFNLvyD 343 (431)
|+|+|||.+-.
T Consensus 9 G~y~~~d~~vs 19 (27)
T TIGR03807 9 GIYLEFDAVVT 19 (27)
T ss_pred EEEEeeeeEEe
Confidence 89999997643
No 11
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=25.43 E-value=30 Score=28.69 Aligned_cols=42 Identities=19% Similarity=0.418 Sum_probs=28.7
Q ss_pred CCCCCCCChhhHHHHHHHHHHhhhcCC----------CCchHHHHHHhhhhcCcC
Q 014082 225 DLTPAYIFEEDVKHFHSTQKSACDKFD----------PTFYPRFKKWCDDYFYIK 269 (431)
Q Consensus 225 DLTP~Y~~eEDa~hFH~~lK~aCD~~~----------~~~Yp~fKkwCDeYFyIp 269 (431)
||.+ ..++....-+.+.+||..+| .++..+..++|.++|-+|
T Consensus 5 Dls~---~~~~~~~~~~~l~~A~~~~GFf~l~nhGi~~~l~~~~~~~~~~fF~lp 56 (116)
T PF14226_consen 5 DLSP---DPADREEVAEQLRDACEEWGFFYLVNHGIPQELIDRVFAAAREFFALP 56 (116)
T ss_dssp EHGG---CHHHHHHHHHHHHHHHHHTSEEEEESSSSSHHHHHHHHHHHHHHHCSH
T ss_pred ECCC---CCccHHHHHHHHHHHHHhCCEEEEecccccchhhHHHHHHHHHHHHhh
Confidence 6666 56777788888889997665 234566666677776655
No 12
>cd02901 Macro_Poa1p_like Macro domain, Poa1p_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. Members of this family show similarity to the yeast protein Poa1p, reported to be a phosphatase specific for Appr-1"-p, a tRNA splicing metabolite. Poa1p may play a role in tRNA splicing regulation.
Probab=23.33 E-value=56 Score=28.34 Aligned_cols=19 Identities=26% Similarity=0.620 Sum_probs=13.6
Q ss_pred hhhcCCCCchHHHHHHhhhh
Q 014082 246 ACDKFDPTFYPRFKKWCDDY 265 (431)
Q Consensus 246 aCD~~~~~~Yp~fKkwCDeY 265 (431)
+-++| |..+..++++|.++
T Consensus 36 i~~~~-p~~~~~~~~~~~~~ 54 (140)
T cd02901 36 FKEKF-PEFVEEYRAACKKK 54 (140)
T ss_pred HHHHC-cHHHHHHHHHHHhc
Confidence 33345 67788889999875
No 13
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=21.79 E-value=75 Score=31.50 Aligned_cols=48 Identities=23% Similarity=0.252 Sum_probs=28.6
Q ss_pred hHHHHHHhhhhcCcCcCCCc--CccceeeccCCCCcChhHHHHHHHHHHhhh
Q 014082 255 YPRFKKWCDDYFYIKHRGER--RGLGGLFFDDLNDYDQEMLLSFATECANSV 304 (431)
Q Consensus 255 Yp~fKkwCDeYFyIpHR~E~--RGIGGIFFDdLn~~~~e~~faFv~~vg~af 304 (431)
-..=++--|+|.--.-..+. =+|.|||||...... ......+.+.+.+
T Consensus 83 ~~~V~~dI~~Y~~W~~~~~~~~~~vdGIFfDE~p~~~--~~~~y~~~l~~~v 132 (253)
T PF12138_consen 83 LSEVKADIDTYASWYGQSEDYGYRVDGIFFDEAPNDY--ANLPYYQNLYNYV 132 (253)
T ss_pred HHHHHHHHHHHhhccccccCCCcccceEEEecCCCcH--HHHHHHHHHHHHH
Confidence 44456666666555443332 589999999875422 4455555555443
No 14
>COG1949 Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
Probab=21.29 E-value=24 Score=34.01 Aligned_cols=21 Identities=33% Similarity=0.496 Sum_probs=19.0
Q ss_pred HHHHHhhhcCCCCchHHHHHH
Q 014082 241 STQKSACDKFDPTFYPRFKKW 261 (431)
Q Consensus 241 ~~lK~aCD~~~~~~Yp~fKkw 261 (431)
.++|++|.++.|+.|..|||-
T Consensus 135 STlKELa~RW~P~i~~~~~K~ 155 (184)
T COG1949 135 STLKELARRWNPEILAGFKKG 155 (184)
T ss_pred HHHHHHHHhhCcHhhhccccc
Confidence 579999999999999999984
Done!