Query 014083
Match_columns 431
No_of_seqs 200 out of 1540
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 05:11:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014083.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014083hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3abz_A Beta-glucosidase I; gly 100.0 1.1E-90 3.6E-95 751.5 35.0 391 6-430 92-663 (845)
2 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 3.4E-89 1.2E-93 730.7 30.3 391 6-430 152-577 (822)
3 3zyz_A Beta-D-glucoside glucoh 100.0 8.3E-89 2.8E-93 726.8 33.1 384 7-430 104-525 (713)
4 1x38_A Beta-D-glucan exohydrol 100.0 1.1E-88 3.6E-93 716.6 32.5 396 6-430 137-564 (602)
5 2x41_A Beta-glucosidase; hydro 100.0 3.4E-88 1.2E-92 725.9 33.5 383 7-430 110-540 (721)
6 3bmx_A Uncharacterized lipopro 100.0 5.5E-82 1.9E-86 669.3 30.1 384 7-430 167-610 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 6.7E-68 2.3E-72 543.1 25.8 362 7-426 141-523 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 4.1E-55 1.4E-59 429.6 16.6 202 7-227 124-341 (351)
9 4g6c_A Beta-hexosaminidase 1; 100.0 2E-47 6.9E-52 374.1 10.5 190 7-216 123-322 (348)
10 4gvf_A Beta-hexosaminidase; TI 100.0 2.2E-47 7.6E-52 373.6 6.4 188 6-210 110-308 (349)
11 2oxn_A Beta-hexosaminidase; TI 100.0 1.5E-47 5.1E-52 374.4 4.2 186 6-210 107-302 (340)
12 4hs4_A Chromate reductase; tri 59.0 17 0.00059 31.7 6.3 56 325-391 62-122 (199)
13 1eiw_A Hypothetical protein MT 53.8 18 0.0006 28.6 4.8 75 332-429 34-110 (111)
14 3lcm_A SMU.1420, putative oxid 44.9 43 0.0015 28.9 6.4 55 325-390 62-131 (196)
15 3u7r_A NADPH-dependent FMN red 44.4 31 0.0011 29.9 5.4 56 324-390 55-116 (190)
16 3svl_A Protein YIEF; E. coli C 42.3 58 0.002 28.0 6.9 56 324-390 60-120 (193)
17 1rli_A Trp repressor binding p 41.0 47 0.0016 27.7 6.0 54 326-390 61-127 (184)
18 3fvw_A Putative NAD(P)H-depend 40.4 54 0.0019 28.1 6.4 55 324-389 55-121 (192)
19 3p0r_A Azoreductase; structura 40.2 41 0.0014 29.4 5.6 54 327-391 83-151 (211)
20 1t5b_A Acyl carrier protein ph 40.0 43 0.0015 28.4 5.7 53 328-391 78-145 (201)
21 2hpv_A FMN-dependent NADH-azor 39.2 43 0.0015 28.8 5.6 56 326-392 84-154 (208)
22 3k1y_A Oxidoreductase; structu 38.8 39 0.0013 29.2 5.2 56 324-390 73-130 (191)
23 1rtt_A Conserved hypothetical 38.1 30 0.001 29.5 4.3 55 325-390 61-120 (193)
24 3lab_A Putative KDPG (2-keto-3 37.2 60 0.0021 28.8 6.1 108 31-179 20-136 (217)
25 3vku_A L-LDH, L-lactate dehydr 36.3 18 0.0006 34.4 2.6 57 332-393 72-130 (326)
26 3u7i_A FMN-dependent NADH-azor 36.0 57 0.002 28.8 5.9 54 327-391 85-154 (223)
27 4h7p_A Malate dehydrogenase; s 34.1 12 0.0004 36.0 1.0 56 332-393 96-155 (345)
28 3ldh_A Lactate dehydrogenase; 34.0 19 0.00065 34.3 2.4 54 334-394 87-144 (330)
29 5mdh_A Malate dehydrogenase; o 33.5 27 0.00092 33.2 3.4 56 332-393 75-134 (333)
30 3dnf_A ISPH, LYTB, 4-hydroxy-3 32.9 1.9E+02 0.0065 26.9 9.0 130 239-405 125-258 (297)
31 1sqs_A Conserved hypothetical 32.2 90 0.0031 27.6 6.7 55 325-390 68-128 (242)
32 3ha2_A NADPH-quinone reductase 31.9 93 0.0032 26.4 6.4 57 324-391 39-105 (177)
33 2x0j_A Malate dehydrogenase; o 31.5 10 0.00035 35.5 0.1 55 333-394 66-124 (294)
34 1d4a_A DT-diaphorase, quinone 30.7 85 0.0029 28.6 6.3 55 325-390 82-151 (273)
35 1oju_A MDH, malate dehydrogena 30.3 10 0.00036 35.5 -0.1 57 332-393 65-123 (294)
36 3f2v_A General stress protein 28.2 89 0.003 26.9 5.7 57 324-391 46-113 (192)
37 3gfs_A FMN-dependent NADPH-azo 27.2 93 0.0032 25.8 5.5 55 325-390 52-108 (174)
38 3szu_A ISPH, 4-hydroxy-3-methy 26.9 47 0.0016 31.5 3.8 120 252-405 152-274 (328)
39 1o4u_A Type II quinolic acid p 26.8 1.3E+02 0.0045 27.8 6.8 109 38-209 116-234 (285)
40 7mdh_A Protein (malate dehydro 26.7 17 0.00059 35.2 0.8 57 332-394 104-164 (375)
41 4aj2_A L-lactate dehydrogenase 26.5 17 0.00057 34.7 0.6 54 333-393 84-141 (331)
42 2q62_A ARSH; alpha/beta, flavo 26.4 79 0.0027 28.5 5.2 55 325-390 87-148 (247)
43 3tem_A Ribosyldihydronicotinam 26.3 1.2E+02 0.004 26.8 6.2 55 325-390 81-150 (228)
44 3hhp_A Malate dehydrogenase; M 26.3 17 0.00058 34.3 0.6 55 332-393 65-123 (312)
45 3tl2_A Malate dehydrogenase; c 26.2 13 0.00045 35.1 -0.2 57 332-393 74-132 (315)
46 3nep_X Malate dehydrogenase; h 26.2 13 0.00044 35.2 -0.3 56 332-394 65-124 (314)
47 3pqe_A L-LDH, L-lactate dehydr 25.7 14 0.00047 35.2 -0.2 57 332-393 69-127 (326)
48 2vzf_A NADH-dependent FMN redu 25.3 71 0.0024 27.2 4.5 55 325-390 58-114 (197)
49 1mld_A Malate dehydrogenase; o 24.6 32 0.0011 32.3 2.2 56 332-394 64-123 (314)
50 3gvi_A Malate dehydrogenase; N 24.2 20 0.00067 34.1 0.6 56 332-394 71-130 (324)
51 4dcu_A GTP-binding protein ENG 23.9 1.3E+02 0.0046 29.4 6.8 45 330-387 96-140 (456)
52 2amj_A Modulator of drug activ 23.8 2.1E+02 0.0071 24.6 7.3 38 325-373 59-96 (204)
53 3r6w_A FMN-dependent NADH-azor 23.7 1.3E+02 0.0045 25.8 6.0 53 327-390 78-149 (212)
54 3qq5_A Small GTP-binding prote 23.5 1.8E+02 0.0061 28.4 7.5 47 326-387 103-149 (423)
55 1ez4_A Lactate dehydrogenase; 22.7 29 0.00098 32.7 1.5 56 332-394 68-127 (318)
56 2hjg_A GTP-binding protein ENG 22.6 1.5E+02 0.0051 28.8 6.8 45 330-387 76-120 (436)
57 1d2d_A TRNA synthetase, tRNA l 22.5 1.9E+02 0.0066 19.8 5.6 37 188-224 12-48 (59)
58 1ur5_A Malate dehydrogenase; o 22.3 18 0.00063 33.9 -0.0 55 333-394 67-125 (309)
59 3hyn_A Putative signal transdu 22.2 1.4E+02 0.0048 25.7 5.5 48 328-387 71-118 (189)
60 1smk_A Malate dehydrogenase, g 22.2 37 0.0013 32.0 2.1 58 331-393 71-130 (326)
61 4dhe_A Probable GTP-binding pr 22.0 1.5E+02 0.0051 25.1 6.0 41 334-387 113-153 (223)
62 2l1n_A Uncharacterized protein 21.9 20 0.00067 28.4 0.1 15 131-145 80-94 (120)
63 1mky_A Probable GTP-binding pr 21.9 1.7E+02 0.0058 28.5 7.0 46 329-387 74-119 (439)
64 1iq8_A Archaeosine tRNA-guanin 21.4 1.1E+02 0.0037 31.5 5.5 73 134-214 82-154 (582)
65 3fi9_A Malate dehydrogenase; s 20.6 17 0.00058 34.8 -0.7 55 332-393 72-131 (343)
66 4h08_A Putative hydrolase; GDS 20.5 1.4E+02 0.005 24.8 5.5 45 335-391 73-122 (200)
67 2g1u_A Hypothetical protein TM 20.3 1.5E+02 0.0051 23.9 5.4 70 334-426 82-152 (155)
68 1gng_X Frattide, glycogen synt 20.2 62 0.0021 20.0 2.0 20 186-209 14-33 (39)
No 1
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=1.1e-90 Score=751.50 Aligned_cols=391 Identities=30% Similarity=0.440 Sum_probs=339.9
Q ss_pred ccccee-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHccCCCCCCeeEEeeccccccCCCCCCCCCcccccc
Q 014083 6 MAGLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNA 84 (431)
Q Consensus 6 ~~G~~~-~aP~~di~~~p~~~r~~~~fgeDp~lv~~~~~a~i~G~q~~~~g~~gv~a~~KHfpg~g~~~~~~~~~~~~~~ 84 (431)
..|+|+ |||++||.|||+|||++|||||||+++++|+.|||+|||+. ||++|+|||||||++. .|...++
T Consensus 92 a~Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~-----gV~a~~KHFpg~g~e~----~r~~~~~ 162 (845)
T 3abz_A 92 AKNAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE-----GIAATVKHFVCNDLED----QRFSSNS 162 (845)
T ss_dssp HTTCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT-----TCBCEEEEETTCCCCT----TTTTCEE
T ss_pred HcCCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC-----CeeEEeeccccCCccc----CCccccC
Confidence 349999 99999999999999999999999999999999999999999 8999999999999643 4666778
Q ss_pred ccCHHHHHhhhcHHHHHHHHhCCcceEeecccccCCccCcCCHHHHHHHhhhhcCCCcEEECCchhhhhhhccccccCCh
Q 014083 85 RVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTP 164 (431)
Q Consensus 85 ~~~~~~l~~~~l~pF~~~i~~g~~~~vM~sy~~v~g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~~~~~~~~~~~~ 164 (431)
.+++++|+|+||+||+++|+++++.+|||||+.+||+|||+|+++|+++||+||||+|+|||||++|.
T Consensus 163 ~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~------------ 230 (845)
T 3abz_A 163 IVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTY------------ 230 (845)
T ss_dssp ECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCC------------
T ss_pred CCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhhccCCCeEEEcccccHH------------
Confidence 89999999999999999997444999999999999999999999999999999999999999998763
Q ss_pred HHHHHHHHHcCCCccCch---hhH-HHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhc----CCCCCCCCCCCCCCCCCc
Q 014083 165 EEAAADAIKAGLDLDCGP---FLA-IHTEGAVRGGL-LREEDVNLALAYTITVQMRLG----MFDGEPSAQPFGNLGPRD 235 (431)
Q Consensus 165 ~~~~~~al~AG~D~~~~~---~~~-~~l~~av~~g~-~~~~~l~~av~ril~~k~~~g----l~~~~p~~~~~~~~~~~~ 235 (431)
++++|++||+||+|.. +.. +.+.++|++|+ +++++||+||+|||++|+++| +|+ +|+..+ ....
T Consensus 231 --~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~~k~~~g~l~~~~~-~p~~~~----~~~~ 303 (845)
T 3abz_A 231 --TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVDNLEKTG-IVENGP----ESTS 303 (845)
T ss_dssp --CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHC-CCTTCC----CCCT
T ss_pred --HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHhCCcccccc-CCccCc----cccc
Confidence 2478999999999962 222 48999999999 999999999999999999999 998 665321 1224
Q ss_pred CCCHHHHHHHHHHhhcceEEeecCCCCCCCcCCCCCeEEEECCCCCccccccccccc-CCCCCCCHHHHHHHhhc--cce
Q 014083 236 VCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAG-VACGYTTPLQGISRYAK--TIH 312 (431)
Q Consensus 236 v~~~~~~~la~e~a~esivLLKN~~~~LPL~~~~~~kiavig~~a~~~~~~~G~~~~-~~~~~~t~~~~l~~~~~--~~~ 312 (431)
+++++|+++++++|++|||||||++++|||++ .+||+||||+++....++|++.. .+.+.++++++|++.+. +.|
T Consensus 304 ~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~Gggs~~~~~~~~vtpl~gi~~~~~~~v~y 381 (845)
T 3abz_A 304 NNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSGGGSASMNSYYVVSPYEGIVNKLGKEVDY 381 (845)
T ss_dssp TCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSCBSTTCCCBSCCCCHHHHHHHHHTSCCEE
T ss_pred cCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccCCCccCcccCCcCCHHHHHHHhhcCceee
Confidence 78999999999999999999999999999975 37999999999988766655543 56678999999988642 334
Q ss_pred eccCCcc------------------------------------c------------------------------------
Q 014083 313 QAGCFGV------------------------------------A------------------------------------ 320 (431)
Q Consensus 313 ~~g~~~~------------------------------------~------------------------------------ 320 (431)
..||... .
T Consensus 382 ~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (845)
T 3abz_A 382 TVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFV 461 (845)
T ss_dssp ECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEE
T ss_pred ccccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceeeeeccccceeecccccccccccccceeE
Confidence 4332100 0
Q ss_pred -----------------------------------------------------------------------c--------
Q 014083 321 -----------------------------------------------------------------------C-------- 321 (431)
Q Consensus 321 -----------------------------------------------------------------------~-------- 321 (431)
.
T Consensus 462 ~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~ 541 (845)
T 3abz_A 462 TLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGL 541 (845)
T ss_dssp EEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCC
T ss_pred EEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcccceeEEEecCCceeeEEEEeccCCcccc
Confidence 0
Q ss_pred ----------------CC-cccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEE
Q 014083 322 ----------------NG-NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLV 384 (431)
Q Consensus 322 ----------------~~-~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV 384 (431)
.+ ...+++++++|+++|++|||+|.++..++||.||++|.||+.|.+||++|++. ++|||||
T Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~~Q~~LI~aV~a~-~~~tVVV 620 (845)
T 3abz_A 542 VGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKA-NPNTVIV 620 (845)
T ss_dssp SSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCTTHHHHHHHHHHH-CSCEEEE
T ss_pred cccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCcccccCCHHHHHHHHHHHHh-CCCEEEE
Confidence 00 12356788999999999999999999999999999999999999999999985 5799999
Q ss_pred EeCCceeeecCcCCCCCccEEEEccCcchhhHHHHHHHhhcCCCCC
Q 014083 385 LMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPG 430 (431)
Q Consensus 385 ~~~g~P~~l~~~~~~~~v~ail~~~~~g~~~g~A~advL~G~~nPs 430 (431)
+++|+|++|+|++ +++|||++|||||++|+|+||||||++|||
T Consensus 621 l~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPS 663 (845)
T 3abz_A 621 NQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPN 663 (845)
T ss_dssp EECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCC
T ss_pred EeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCC
Confidence 9999999999983 799999999999999999999999999998
No 2
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=3.4e-89 Score=730.71 Aligned_cols=391 Identities=26% Similarity=0.383 Sum_probs=332.4
Q ss_pred ccccee-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHccCC----CCCCeeEEeeccccccCCCCCCCCCcc
Q 014083 6 MAGLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNT----GSRLKVAACCKHYTAYDLDNWNGVDRY 80 (431)
Q Consensus 6 ~~G~~~-~aP~~di~~~p~~~r~~~~fgeDp~lv~~~~~a~i~G~q~~~----~g~~gv~a~~KHfpg~g~~~~~~~~~~ 80 (431)
..|||+ |||++||.|||+|||++|||||||+++++|+.|||+|||+.. .+..||++|+|||||||... .+|.
T Consensus 152 a~Gin~~~aPvvDv~rdPr~GR~~EsfGEDP~lv~~~a~A~V~GlQ~~~~~~~~~~~gV~a~~KHFpG~G~~~---~~r~ 228 (822)
T 3rrx_A 152 ATGIEWSFAPTVAVVRDDRWGRTYESYSEDPDLVKRYAGEMVTGIQGDVGADFLKGSNRIATAKHFVGDGGTE---RGVD 228 (822)
T ss_dssp TTTCCEEEEEECCCCSCTTSTTGGGSSCSCHHHHHHHHHHHHHHHHCCSSTTTTCTTCCEEEEEEESCGGGBG---GGCT
T ss_pred hcCCcEeeccccccccCCCcCccccCCCCCHHHHHHHHHHHHHHHhcccccccccCCCeEEEeeeccCCCccc---cCcc
Confidence 459999 999999999999999999999999999999999999999851 12338999999999998532 2333
Q ss_pred ccccccCHHHHHhhhcHHHHHHHHhCCcceEeecccccCCccCcCCHHHHHHHhhhhcCCCcEEECCchhhhhhhccccc
Q 014083 81 HFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHY 160 (431)
Q Consensus 81 ~~~~~~~~~~l~~~~l~pF~~~i~~g~~~~vM~sy~~v~g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~~~~~~~~ 160 (431)
..++.+++++|+|+||+||+++|++| +.+|||||+.+||+|+|.|+++|+++||+||||+|+|||||++|.++..
T Consensus 229 ~~~~~vs~~~L~e~~L~PF~~aI~ag-~~sVM~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~---- 303 (822)
T 3rrx_A 229 RGNTLIDEKGLRDIHSAGYFSAINQG-VQSVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEG---- 303 (822)
T ss_dssp TCEECCCHHHHHHTTSHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTT----
T ss_pred CccCcCCHHHHHHHhhHHHHHHHHcC-CCEEEeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccchhhhhcC----
Confidence 44567899999999999999999987 8999999999999999999999999999999999999999999987753
Q ss_pred cCChHHHHHHHHHcCCCccCchh----hHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCC--CCCCCCCC
Q 014083 161 TRTPEEAAADAIKAGLDLDCGPF----LAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQ--PFGNLGPR 234 (431)
Q Consensus 161 ~~~~~~~~~~al~AG~D~~~~~~----~~~~l~~av~~g~~~~~~l~~av~ril~~k~~~gl~~~~p~~~--~~~~~~~~ 234 (431)
...+++++|++||+||+|.+. +++.+.++|++|+++++|||+||+|||++|+++|||+ +|+.. ++.. ...
T Consensus 304 --~~~ea~~~Al~AG~Dm~m~~~~~~~~~~~l~~aV~~G~i~e~rID~av~RIL~~K~~lGLfd-~p~~~~~~~~~-~~~ 379 (822)
T 3rrx_A 304 --CDLEQCAQAINAGVDVIMVPEHFEAFYHNTVKQVKAGVIAESRINDAVRRFLRAKIRWGVFT-KSKPSARPESQ-HPQ 379 (822)
T ss_dssp --CBTTBCHHHHHHTCCBEECTTTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTTT-SCCGGGSGGGS-CGG
T ss_pred --ChHHHHHHHHHcCCCEECCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCC-CCCcccccccc-ccc
Confidence 234678899999999999652 4678999999999999999999999999999999999 76531 1111 123
Q ss_pred cCCCHHHHHHHHHHhhcceEEeecCCCCCCCcCCCCCeEEEECCCCCccccccccccc----------CCCCCCCHHHHH
Q 014083 235 DVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAG----------VACGYTTPLQGI 304 (431)
Q Consensus 235 ~v~~~~~~~la~e~a~esivLLKN~~~~LPL~~~~~~kiavig~~a~~~~~~~G~~~~----------~~~~~~t~~~~l 304 (431)
.+++++|+++|+++|+||||||||++++|||++. +||+||||.|++...+.|+|+. ..++.++++++|
T Consensus 380 ~v~~~eh~~lAre~A~eSiVLLKN~~~~LPL~~~--~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi 457 (822)
T 3rrx_A 380 WLGAAEHRTLAREAVRKSLVLLKNNESILPIKAS--SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGL 457 (822)
T ss_dssp GTTCHHHHHHHHHHHHHHCEEEEEGGGCCSBCTT--SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHH
T ss_pred ccCCHHHHHHHHHHHHhceEEEecCCCccCCCCC--CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHH
Confidence 5789999999999999999999999999999865 7999999999987666666541 234678999999
Q ss_pred HHhhcc-----ceeccCCccccCCcccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCC---hhHHHHHHHHHhh
Q 014083 305 SRYAKT-----IHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLP---GRQQELVSRVAKA 376 (431)
Q Consensus 305 ~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~---~~q~~li~~l~~~ 376 (431)
++.+.. .|.. .. +.++++|++||++|++++.+++| ||.++.|| +.|.+||++|++
T Consensus 458 ~~~~~~~~~~v~~~~---------~~------~~a~~aDv~Iv~~Ge~~~~e~~g-Dr~~L~lp~g~~~q~~Li~av~a- 520 (822)
T 3rrx_A 458 QSQVTKAGGKITLSE---------SG------EYTSKPDVAIVVIGEEPYAEWFG-DIELLEFQHETKHALALLKQLKA- 520 (822)
T ss_dssp HHHHHHTTCEEEECT---------TC------CCSSCCSEEEEEEECCCCCGGGG-CCSCCBTTTTTCHHHHHHHHHHH-
T ss_pred HHHHHhcCCeEEEcc---------cc------cccccCCeEEEEecCCcccccCC-CcccccCCCCChHHHHHHHHHHH-
Confidence 987531 1211 00 23688999999999887767666 99999999 579999999987
Q ss_pred CCCCEEEEEeCCceeeecCcCCCCCccEEEEccCcchhhHHHHHHHhhcCC------CCC
Q 014083 377 SRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRA------NPG 430 (431)
Q Consensus 377 ~~~pvVvV~~~g~P~~l~~~~~~~~v~ail~~~~~g~~~g~A~advL~G~~------nPs 430 (431)
.+||||||+++|+|+.+.++. ++++|||++|+||++++ |+||||||++ |||
T Consensus 521 ~g~pvVvVl~sGrP~~l~~~~--~~~~Ail~aw~pG~eGg-AiAdVLfG~v~g~~~~nPS 577 (822)
T 3rrx_A 521 DNIPVVTVFLSGRPLWVNKEL--NASDAFVAAWLPGSEGE-GVADVLLTNKQGKTQFDFT 577 (822)
T ss_dssp TTCCEEEEEECSSCCBCHHHH--HTCSEEEEEECCCSBTH-HHHHHHBBCTTSCBSCCCC
T ss_pred hCCCEEEEEeCCcceeccchh--hhCCeEEEcCCCCchhH-HHHHHHhcccccccccCCC
Confidence 578999999999999996543 47999999999999987 9999999997 998
No 3
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=8.3e-89 Score=726.83 Aligned_cols=384 Identities=27% Similarity=0.377 Sum_probs=327.5
Q ss_pred cccee-eCcccc-ccCCCCCCccccccCCCHHHHHHHHHHHHHHHccCCCCCCeeEEeeccccccCCCCCCCCCcccccc
Q 014083 7 AGLTY-WSPNVN-IFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNA 84 (431)
Q Consensus 7 ~G~~~-~aP~~d-i~~~p~~~r~~~~fgeDp~lv~~~~~a~i~G~q~~~~g~~gv~a~~KHfpg~g~~~~~~~~~~~~~~ 84 (431)
.|+|+ |||++| +.|||+|||++|+|||||+++++|+.|||+|||+. ||++|+|||||||++.+ |.+.++
T Consensus 104 ~Gi~~~laP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~-----gV~a~~KHF~g~g~e~~----r~~~~~ 174 (713)
T 3zyz_A 104 SGIHVILGPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTINGIQSV-----GVQATAKHYILNEQELN----RETISS 174 (713)
T ss_dssp TTCSEECCCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHHHHHHHT-----TCEEEEEEETTCCCSTT----TTTCEE
T ss_pred cCCCEEECCeecccCCCCCCCcccccccCCHHHHHHHHHHHHHHHhhC-----CeEEEEecCccCCcccc----CccccC
Confidence 49999 999999 88999999999999999999999999999999999 89999999999997653 455677
Q ss_pred ccCHHHHHhhhcHHHHHHHHhCCcceEeecccccCCccCcCCHHHHHHHhhhhcCCCcEEECCchhhhhhhccccccCCh
Q 014083 85 RVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTP 164 (431)
Q Consensus 85 ~~~~~~l~~~~l~pF~~~i~~g~~~~vM~sy~~v~g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~~~~~~~~~~~~ 164 (431)
.+++++|+|+||+||+++|++| +.+|||||+.+||+|+|.|+++|+++||+||||+|+|||||++++
T Consensus 175 ~v~~~~l~e~~l~pF~~ai~ag-~~~VM~syn~vng~pa~~s~~ll~~iLR~e~GF~G~VvSD~~a~~------------ 241 (713)
T 3zyz_A 175 NPDDRTLHELYTWPFADAVQAN-VASVMCSYNKVNTTWACEDQYTLQTVLKDQLGFPGYVMTDWNAQH------------ 241 (713)
T ss_dssp CCCHHHHHHTTTHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHCCCCCCCSCCCSEEEESTTCCC------------
T ss_pred cCCHHHHHHhhhHHHHHHHHcC-CCeEEeeccccCCccCcCCHHHHHHHHHHHcCCCEEEEecCccHH------------
Confidence 8999999999999999999987 899999999999999999999999999999999999999998752
Q ss_pred HHHHHHHHHcCCCccCchh--------hHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcC
Q 014083 165 EEAAADAIKAGLDLDCGPF--------LAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDV 236 (431)
Q Consensus 165 ~~~~~~al~AG~D~~~~~~--------~~~~l~~av~~g~~~~~~l~~av~ril~~k~~~gl~~~~p~~~~~~~~~~~~v 236 (431)
++++|++||+||+|.+. +.+.|.++|++|+++++|||+||+|||++|+++|+|+ +|+.. ... ...
T Consensus 242 --~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RIL~~k~~lg~~~-~~~~~--~~~--~~~ 314 (713)
T 3zyz_A 242 --TTVQSANSGLDMSMPGTDFNGNNRLWGPALTNAVNSNQVPTSRVDDMVTRILAAWYLTGQDQ-AGYPS--FNI--SRN 314 (713)
T ss_dssp --CSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTS-TTCCC--CCT--TSC
T ss_pred --HHHHHHHcCCCEeCCCCcccchhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCcc-cCCCC--ccc--ccc
Confidence 35889999999999642 3478999999999999999999999999999999997 55521 111 112
Q ss_pred CCHHHHHHHHHHhhcceEEeecCCCCCCCcCCCCCeEEEECCCCCcccc-----------------cccccc--cCCCCC
Q 014083 237 CTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVT-----------------MIGNYA--GVACGY 297 (431)
Q Consensus 237 ~~~~~~~la~e~a~esivLLKN~~~~LPL~~~~~~kiavig~~a~~~~~-----------------~~G~~~--~~~~~~ 297 (431)
.+++|+++++++|+||||||||++++|||++. +||+||||.+..... ..|.++ ..+++.
T Consensus 315 ~~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~IaViG~~A~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~ 392 (713)
T 3zyz_A 315 VQGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIAVVGSAAIIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYF 392 (713)
T ss_dssp CCTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEEEESGGGSCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCC
T ss_pred cCHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEEEECCCccccccccccccccccccccCceecccCCCCcCcCCC
Confidence 36899999999999999999999999999864 799999999874210 112222 345677
Q ss_pred CCHHHHHHHhhccceeccCCccccCCcccHHHHHHHhhcCCEEEEEeeCCCCcccccC--------CCCCCCCChhHHHH
Q 014083 298 TTPLQGISRYAKTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFI--------DRAGLLLPGRQQEL 369 (431)
Q Consensus 298 ~t~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~--------dr~~l~l~~~q~~l 369 (431)
++++++|++.+.. .|+.. .......++++++.++++|++||++|.. ++||. ||+++.||..|.+|
T Consensus 393 ~t~~~~i~~~~~~---~g~~v-~~~~~~~~~~a~~~A~~aDv~Iv~vg~~---~gEg~~~~~g~~gDR~~l~Lp~~Q~~L 465 (713)
T 3zyz_A 393 VAPYDAINTRASS---QGTQV-TLSNTDNTSSGASAARGKDVAIVFITAD---SGEGYITVEGNAGDRNNLDPWHNGNAL 465 (713)
T ss_dssp CCHHHHHHHHHHT---TTCEE-EEECSCCHHHHHHHHTTCSEEEEEEEEC---CBCTTCCBTTBCSSCSCSSCSTTHHHH
T ss_pred CCHHHHHHHHhcc---CCeEE-EEeCCccHHHHHHHhhcCCEEEEEeccc---CCCCccccccCCCCcccccCChhHHHH
Confidence 8999999986521 01100 0011335788999999999999999853 46776 99999999999999
Q ss_pred HHHHHhhCCCCEEEEEeCCceeee-cCcCCCCCccEEEEccCcchhhHHHHHHHhhcCCCCC
Q 014083 370 VSRVAKASRGPVVLVLMCGGPVDV-SFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPG 430 (431)
Q Consensus 370 i~~l~~~~~~pvVvV~~~g~P~~l-~~~~~~~~v~ail~~~~~g~~~g~A~advL~G~~nPs 430 (431)
|++|++. ++|||||+++|+|++| +|+. .++++|||++|+|||++|+|+||||||++|||
T Consensus 466 i~~v~~~-~~~~VVVl~sG~p~~~~~w~~-~~~v~Ail~aw~pGqegG~AiAdvL~G~~nPS 525 (713)
T 3zyz_A 466 VQAVAGA-NSNVIVVVHSVGAIILEQILA-LPQVKAVVWAGLPSQESGNALVDVLWGDVSPS 525 (713)
T ss_dssp HHHHHHH-CSCEEEEEEESSCCCCHHHHT-CTTEEEEEECCCCGGGHHHHHHHHHTTSSCCC
T ss_pred HHHHHHh-CCCeEEEEecCCcccchhhhh-ccccCEEEEcCCCCchhhheehhhhcCCcCCC
Confidence 9999985 5799999999999999 6763 46899999999999999999999999999998
No 4
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=1.1e-88 Score=716.59 Aligned_cols=396 Identities=25% Similarity=0.374 Sum_probs=337.8
Q ss_pred ccccee-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHccCCCC-----------CCeeEEeeccccccCCCC
Q 014083 6 MAGLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGS-----------RLKVAACCKHYTAYDLDN 73 (431)
Q Consensus 6 ~~G~~~-~aP~~di~~~p~~~r~~~~fgeDp~lv~~~~~a~i~G~q~~~~g-----------~~gv~a~~KHfpg~g~~~ 73 (431)
..|||+ |||++||.|||+|||++|||||||++|++|+. ||+|||+.+.. ..||++|+|||||||.+.
T Consensus 137 a~Gi~~~~aP~vdv~r~p~~GR~~esfgeDP~lv~~~a~-~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~ 215 (602)
T 1x38_A 137 ATGIQYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTV 215 (602)
T ss_dssp HTTCCEECCCBCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCG
T ss_pred HcCCCEEeeceeccccCCCcCccccCcCCCHHHHHHHHH-HHHHhcCCCccccccccccccccCCeEEEeccccCCCccc
Confidence 349999 99999999999999999999999999999999 99999993210 128999999999999753
Q ss_pred CCCCCccccccccCHHHHHhhhcHHHHHHHHhCCcceEeecccccCCccCcCCHHHHHHHhhhhcCCCcEEECCchhhhh
Q 014083 74 WNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGV 153 (431)
Q Consensus 74 ~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~~g~~~~vM~sy~~v~g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~ 153 (431)
. ++...++.+++++|+|+||+||+++|++| +.+|||||+.+||+|+|+|+++|+++||+||||+|+|||||++|++
T Consensus 216 ~---~~~~~~~~~~~~~l~e~~l~pF~~ai~ag-~~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~ 291 (602)
T 1x38_A 216 D---GINENNTIINREGLMNIHMPAYKNAMDKG-VSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDR 291 (602)
T ss_dssp G---GCTTCEECCCHHHHHHHTSHHHHHHHHTT-CCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGG
T ss_pred c---CcccccCcCCHHHHHHHHHHHHHHHHHcC-CCEEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHH
Confidence 1 23334568899999999999999999987 8999999999999999999999999999999999999999999998
Q ss_pred hhccccccCChHHHHHHHHHcCCCccCch----hhHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 014083 154 LYNTQHYTRTPEEAAADAIKAGLDLDCGP----FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFG 229 (431)
Q Consensus 154 ~~~~~~~~~~~~~~~~~al~AG~D~~~~~----~~~~~l~~av~~g~~~~~~l~~av~ril~~k~~~gl~~~~p~~~~~~ 229 (431)
+...++ .+..+++++|++||+||+|.+ .+.+.+.++|++|+++++|||+||+|||++|+++|+|+ +|+..+
T Consensus 292 ~~~~~~--~~~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~-~p~~~~-- 366 (602)
T 1x38_A 292 ITTPAG--SDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NPYADP-- 366 (602)
T ss_dssp GSSSTT--TTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CCSCCG--
T ss_pred HHhhcC--CCHHHHHHHHHHcCCCcccCCcchhhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCC-CCCCCc--
Confidence 875443 467899999999999999864 24678999999999999999999999999999999999 776321
Q ss_pred CCCCCcCCCHHHHHHHHHHhhcceEEeecCC--C---CCCCcCCCCCeEEEECCCCCccccccccccc-------CCCCC
Q 014083 230 NLGPRDVCTPAHQQLALQAAHQGIVLLKNSA--R---TLPLSTLRHHTVAVIGPNSDVTVTMIGNYAG-------VACGY 297 (431)
Q Consensus 230 ~~~~~~v~~~~~~~la~e~a~esivLLKN~~--~---~LPL~~~~~~kiavig~~a~~~~~~~G~~~~-------~~~~~ 297 (431)
. ....+++++|+++++++|+||||||||++ + +|||+++ .+||+|+||.++....++|+|+. .+...
T Consensus 367 ~-~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~~LPL~~~-~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~ 444 (602)
T 1x38_A 367 A-MAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKK-APKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVG 444 (602)
T ss_dssp G-GGGGTTCHHHHHHHHHHHHHHCEEEEECSSTTSCCCCSCCSC-CSEEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSC
T ss_pred c-hhhccCCHHHHHHHHHHHHhceEEeccCCCCCcccccccCCC-CCEEEEEcCCCccccccCCcceeeccCCCCCCCCc
Confidence 1 12357899999999999999999999997 5 9999754 47999999999886555665532 24456
Q ss_pred CCHHHHHHHhhc----cceeccCCccccCCcccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHH
Q 014083 298 TTPLQGISRYAK----TIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRV 373 (431)
Q Consensus 298 ~t~~~~l~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l 373 (431)
.+++++|+++.. +.|..++ .. .+. .++++|++||++|.++..++|| ||.++.||..|.+||+++
T Consensus 445 ~t~~~~l~~~~~~~~~v~~~~~~---------~~-~~~-~a~~aD~viv~~g~~~~~e~~g-dr~~l~lp~~q~~li~~v 512 (602)
T 1x38_A 445 TTILEAVKAAVDPSTVVVFAENP---------DA-EFV-KSGGFSYAIVAVGEHPYTETKG-DNLNLTIPEPGLSTVQAV 512 (602)
T ss_dssp BCHHHHHHHHSCTTCEEEEESSC---------CH-HHH-HHTTCSCEEEEEECCCCCGGGG-CCSSCCCCSSSHHHHHHH
T ss_pred ccHHHHHHHHhCCCeEEEEcCCC---------CH-HHH-HHhhCCEEEEEeccCcccccCC-CcCCcCCChhHHHHHHHH
Confidence 789999998642 3344332 11 122 3889999999999888788888 999999999999999999
Q ss_pred HhhCCCCEEEEEeCCceeeecCcCCCCCccEEEEccCcchhhHHHHHHHhhcCCCCC
Q 014083 374 AKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPG 430 (431)
Q Consensus 374 ~~~~~~pvVvV~~~g~P~~l~~~~~~~~v~ail~~~~~g~~~g~A~advL~G~~nPs 430 (431)
++ ++|||||+++|+||+|.++. ++++|||++|+||+++ +|+||||||++|||
T Consensus 513 ~~--~~~~VvVl~~g~P~~l~~~~--~~~~Ail~a~~pG~~g-~AiadvL~G~~nPs 564 (602)
T 1x38_A 513 CG--GVRCATVLISGRPVVVQPLL--AASDALVAAWLPGSEG-QGVTDALFGDFGFT 564 (602)
T ss_dssp HT--TSCEEEEEECSSCCCCHHHH--HHCSEEEEEECCCSBT-HHHHHHHTTSSCCC
T ss_pred Hh--CCCEEEEEeCCCceeccchh--hccCeEEeccCCchHH-HHHHHHHcCCCCCC
Confidence 86 57999999999999996432 5899999999999997 99999999999998
No 5
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=3.4e-88 Score=725.92 Aligned_cols=383 Identities=28% Similarity=0.418 Sum_probs=333.1
Q ss_pred cccee-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHccCCCCCCeeEEeeccccccCCCCCCCCCccccccc
Q 014083 7 AGLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNAR 85 (431)
Q Consensus 7 ~G~~~-~aP~~di~~~p~~~r~~~~fgeDp~lv~~~~~a~i~G~q~~~~g~~gv~a~~KHfpg~g~~~~~~~~~~~~~~~ 85 (431)
.|+|+ |||++||.|||+|||++|||||||+++++|+.|||+|||+. ||++|+|||||||++. .|...++.
T Consensus 110 ~Gi~~~~aP~vdi~r~p~~gR~~e~fgeDP~l~~~~a~a~v~G~q~~-----gV~a~~KHF~g~g~e~----~r~~~ds~ 180 (721)
T 2x41_A 110 YGVDVLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ-----GVGACIKHFVANNQET----NRMVVDTI 180 (721)
T ss_dssp TTCSEECCCBCCCCCSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHTT-----TCBCEEEEETTCCCCT----TTTTCEEE
T ss_pred hCCCEEeeceECCCCCCCCCcccccCCCCHHHHHHHHHHHHHHhhhC-----CeEEEecccccCCCCC----CCCcccCC
Confidence 49999 99999999999999999999999999999999999999999 8999999999999643 56677788
Q ss_pred cCHHHHHhhhcHHHHHHHHhCCcceEeecccccCCccCcCCHHHHHHHhhhhcCCCcEEECCchhhhhhhccccccCChH
Q 014083 86 VSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPE 165 (431)
Q Consensus 86 ~~~~~l~~~~l~pF~~~i~~g~~~~vM~sy~~v~g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~~~~~~~~~~~~~ 165 (431)
+++++|+|+||+||+++|+++++.+|||||+.+||+|||+|+++|+++||+||||+|+|||||+++.
T Consensus 181 ~~~~~l~e~~l~pF~~ai~~a~~~~vM~sy~~i~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~------------- 247 (721)
T 2x41_A 181 VSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGD------------- 247 (721)
T ss_dssp CCHHHHHHTHHHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEEECTTCSS-------------
T ss_pred CCHHHHHhhhHHHHHHHHHhcCCCEEEecCCCCCCccccCCHHHHHHHHHHhcCCCEEEEccCchHH-------------
Confidence 9999999999999999999555999999999999999999999999999999999999999998762
Q ss_pred HHHHHHHHcCCCccCch--hh--------HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCc
Q 014083 166 EAAADAIKAGLDLDCGP--FL--------AIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRD 235 (431)
Q Consensus 166 ~~~~~al~AG~D~~~~~--~~--------~~~l~~av~~g~~~~~~l~~av~ril~~k~~~gl~~~~p~~~~~~~~~~~~ 235 (431)
++++|++||+||+|.. .+ .+.+.++|++|++++++||+||+|||++|+++|+|+ +|+. ...
T Consensus 248 -~~~~al~AG~D~~m~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~Ril~~k~~~gl~~-~~~~-------~~~ 318 (721)
T 2x41_A 248 -NPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFK-NYRY-------SNK 318 (721)
T ss_dssp -CHHHHHHHTCCBBCSCCGGGTCTTCCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSGGGG-TCCC-------CSC
T ss_pred -HHHHHHHcCCCcccCCCcccccchhHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhCCCC-CCCc-------ccc
Confidence 3689999999999853 22 278999999999999999999999999999999999 6531 235
Q ss_pred CCCHHHHHHHHHHhhcceEEeecCCCCCCCcCCCCCeEEEECCCCCccccccc-ccccCCCCCCCHHHHHHHh-hc----
Q 014083 236 VCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIG-NYAGVACGYTTPLQGISRY-AK---- 309 (431)
Q Consensus 236 v~~~~~~~la~e~a~esivLLKN~~~~LPL~~~~~~kiavig~~a~~~~~~~G-~~~~~~~~~~t~~~~l~~~-~~---- 309 (431)
+++++|+++++++|+||||||||++ +|||++. +||+||||.+.....+++ +....+.+.++++++|+++ +.
T Consensus 319 ~~~~~h~~la~~~A~esiVLLKN~~-~LPL~~~--~kIaviG~~A~~~~~~g~gs~~~~~~~~vt~~~gl~~~G~~~~~~ 395 (721)
T 2x41_A 319 PDLEKHAKVAYEAGAEGVVLLRNEE-ALPLSEN--SKIALFGTGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEE 395 (721)
T ss_dssp CCHHHHHHHHHHHHHHHCEEEEESS-CCSCCTT--CCEEEESGGGTSCCCSCBSTTCCCCSCCCCHHHHHHHTTCCBCHH
T ss_pred cCCHHHHHHHHHHHHhchhhhcCCC-cCCCCCC--CEEEEEecCCcCccccCCCCCCcCcCCCCCHHHHHHHhccCCCCc
Confidence 7789999999999999999999998 9999864 799999999988765432 2233566788999999987 43
Q ss_pred --ccee-------------cc---CCcc--ccCCcccH--HHHHHHhhcCCEEEEEeeCCCCcccccCCCC----CCCCC
Q 014083 310 --TIHQ-------------AG---CFGV--ACNGNQLI--GAAEVAARQADATVLVMGLDQSIEAEFIDRA----GLLLP 363 (431)
Q Consensus 310 --~~~~-------------~g---~~~~--~~~~~~~~--~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~----~l~l~ 363 (431)
+.|. .| +... ...+...+ +++++.++++|++||++|.+ ++||.||. ++.||
T Consensus 396 ~~v~y~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp 472 (721)
T 2x41_A 396 LAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLS 472 (721)
T ss_dssp HHHHHHHHHHHHHHSTTTSCBC-----CBCCCCCSCCSCHHHHHHHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCC
T ss_pred eEEEEeecccccccccccCCCccceeccccCCCchhhhcHHHHHHHHhcCCEEEEEEecc---ccccccccCCCCCccCC
Confidence 3455 44 2100 11223445 78889999999999999975 68999999 99999
Q ss_pred hhHHHHHHHHH----hhCCCCEEEEEeCCceeee-cCcCCCCCccEEEEccCcchhhHHHHHHHhhcCCCCC
Q 014083 364 GRQQELVSRVA----KASRGPVVLVLMCGGPVDV-SFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPG 430 (431)
Q Consensus 364 ~~q~~li~~l~----~~~~~pvVvV~~~g~P~~l-~~~~~~~~v~ail~~~~~g~~~g~A~advL~G~~nPs 430 (431)
..|.+||++|+ + .++|||||+++|+||+| .|+ ++++|||++|+||+++|+|+||||||++|||
T Consensus 473 ~~q~~LI~~v~~~~~~-~~~~vVVVl~~g~P~~l~~~~---~~v~AiL~a~~pG~egg~AlAdVL~G~vnPS 540 (721)
T 2x41_A 473 DDETDLIKTVSREFHE-QGKKVIVLLNIGSPVEVVSWR---DLVDGILLVWQAGQETGRIVADVLTGRINPS 540 (721)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCEEEEEECSSCCCCTTTG---GGCSEEEECCCCGGGHHHHHHHHHHTSSCCC
T ss_pred HHHHHHHHHHHHHHHH-hCCCEEEEEecCCceEccchh---hcCCEEEEcCCCchhHHHHHHHHHcCCCCCC
Confidence 99999999998 6 46799999999999999 665 5799999999999999999999999999998
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=5.5e-82 Score=669.31 Aligned_cols=384 Identities=20% Similarity=0.249 Sum_probs=314.9
Q ss_pred cccee-eCccccccCCCCCCc-cccccCCCHHHHHHHHHHHHHHHccCCCCCCeeEEeeccccccCC---CCCCCCCccc
Q 014083 7 AGLTY-WSPNVNIFRDPRWGR-GQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDL---DNWNGVDRYH 81 (431)
Q Consensus 7 ~G~~~-~aP~~di~~~p~~~r-~~~~fgeDp~lv~~~~~a~i~G~q~~~~g~~gv~a~~KHfpg~g~---~~~~~~~~~~ 81 (431)
.|||+ |||++||.|||+||| ++|||||||++|++|+.|||+|||+. ||++|+|||||||. ++|.+.++.
T Consensus 167 ~Gi~~~~aPvvDv~r~p~~grig~rsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpg~g~~~~dsh~~~~~~- 240 (642)
T 3bmx_A 167 LGINTDFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQ-----DIASALKHFPGHGDTDVDSHYGLPLV- 240 (642)
T ss_dssp HTCCEECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHHHT-----TCEEEEEEETCCTTCSSCTTTSCCBC-
T ss_pred cCCCEEECCccccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHhC-----CceEEeccccCCCCccCCCCCCCcee-
Confidence 49999 999999999999996 89999999999999999999999999 89999999999984 455555543
Q ss_pred cccccCHHHHHhhhcHHHHHHHHhCCcceEeec---ccccC-------------CccCcCCHHHHHHHhhhhcCCCcEEE
Q 014083 82 FNARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVN-------------GKPTCADPDILKNTIHGQWRLDGYIV 145 (431)
Q Consensus 82 ~~~~~~~~~l~~~~l~pF~~~i~~g~~~~vM~s---y~~v~-------------g~pa~~s~~~l~~~LR~~~gf~G~v~ 145 (431)
.+++++|+|+||+||+++|++| +.+|||| |+.+| |+|||+|+++|+++||+||||+|+||
T Consensus 241 ---~~~~~~l~e~~l~PF~~ai~ag-~~~VM~ah~~y~~id~~~~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~Vv 316 (642)
T 3bmx_A 241 ---SHGQERLREVELYPFQKAIDAG-ADMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIV 316 (642)
T ss_dssp ---CCCHHHHHHTTHHHHHHHHHTT-CCEEEECCCBCTTTCCCEEECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSEEE
T ss_pred ---ccCHHHHhhhhHHHHHHHHHcC-CCEEEEccccccccCccccccccccccCcccccCCHHHHHHHhhCcCCCCEEEE
Confidence 4699999999999999999987 8999999 55667 78999999999999999999999999
Q ss_pred CCchhhhhhhccccccCChHHHHHHHHHcCCCccCch-------------hhHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q 014083 146 SDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP-------------FLAIHTEGAVRGGLLREEDVNLALAYTITV 212 (431)
Q Consensus 146 sD~~~~~~~~~~~~~~~~~~~~~~~al~AG~D~~~~~-------------~~~~~l~~av~~g~~~~~~l~~av~ril~~ 212 (431)
|||++|.++... .+..+++++|++||+||+|.+ .+.+.+.++|++|+++++|||+||+|||++
T Consensus 317 SD~~~m~ai~~~----~~~~~a~~~Al~AG~D~~l~~~~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~ 392 (642)
T 3bmx_A 317 TDALNMKAIADH----FGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISL 392 (642)
T ss_dssp CSCTTSHHHHTT----SCHHHHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred eCchhhHHHHhc----CCHHHHHHHHHHcCCCEecccccccccccchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHH
Confidence 999999998752 267899999999999998543 346789999999999999999999999999
Q ss_pred HHHhcCCCCC-CCCCCCC--CCCCCcCCCHHHHHHHHHHhhcceEEeecCCCCCCCcCCCCCeEEEECCCCCcccccccc
Q 014083 213 QMRLGMFDGE-PSAQPFG--NLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGN 289 (431)
Q Consensus 213 k~~~gl~~~~-p~~~~~~--~~~~~~v~~~~~~~la~e~a~esivLLKN~~~~LPL~~~~~~kiavig~~a~~~~~~~G~ 289 (431)
|+++|+|+ + |+..... ......+++++|+++++++|+||||||||++++|||++++.+||+|+||.+..
T Consensus 393 k~~~gl~~-~~p~~~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~iaviG~~~~~------- 464 (642)
T 3bmx_A 393 KIKRGMYP-ARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQ------- 464 (642)
T ss_dssp HHHTTCSS-CCCCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEEGGGCCSCCCCTTCEEEEEESSHHH-------
T ss_pred HHHcCCCc-CCCCcccccchhhhhhhcCCHHHHHHHHHHHHhCEEEEccCCCcCCCCCCCCCEEEEEeCCccc-------
Confidence 99999999 5 6531000 00013477899999999999999999999999999985455799999987422
Q ss_pred cccCCCCCCCHHHHHHHhh---ccceeccCCccccCCcccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhH
Q 014083 290 YAGVACGYTTPLQGISRYA---KTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ 366 (431)
Q Consensus 290 ~~~~~~~~~t~~~~l~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q 366 (431)
..+++++|+++. ...+..++... ......++++++.++++|+|||+++.......| ++.+|..|
T Consensus 465 -------~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~~e-----~~~l~~~q 531 (642)
T 3bmx_A 465 -------TASIEQTIHDLIKRKKIKPVSLSKMN-FASQVFKTEHEKQVKEADYIITGSYVVKNDPVV-----NDGVIDDT 531 (642)
T ss_dssp -------HHHHHHHHHHHHHTTSSCCCEEEEEE-CTTCCCCHHHHHHHHHCSEEEEEECCSSCCCCE-----ETTEECCC
T ss_pred -------hhhHHHHHHHhhCCCCeeEEeccCCC-CcchhhHHHHHHHHhhCCEEEEEecCCCCCchh-----ccCCcccc
Confidence 246789998875 22332222111 011245678889999999999965532111222 34456667
Q ss_pred ------------HHHHHHHHhhCCCCEEEEEeCCceeeecCcCCCCCccEEEEccCc--------chhhHHHHHHHhhcC
Q 014083 367 ------------QELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYP--------GQAGGAAIADVLFGR 426 (431)
Q Consensus 367 ------------~~li~~l~~~~~~pvVvV~~~g~P~~l~~~~~~~~v~ail~~~~~--------g~~~g~A~advL~G~ 426 (431)
.+||+++++ .+||||||.+ |+||++.|++ +++|||++|++ |+++++|+||||||+
T Consensus 532 ~~~~~~~~~~~~~~li~~~~~-~~~pvVvv~~-g~P~~l~~~~---~~~Ail~a~~~~G~~~g~~g~~~g~AiadvLfG~ 606 (642)
T 3bmx_A 532 ISDSSKWATVFPRAVMKAALQ-HNKPFVLMSL-RNPYDAANFE---EAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQ 606 (642)
T ss_dssp CCSSTTHHHHHHHHHHHHHHH-TTCCEEEEEC-SCGGGGGGCT---TCSEEEECSCCCCEETTEESCSHHHHHHHHHTTS
T ss_pred ccccccccchhHHHHHHHHHH-cCCCEEEEec-CChhcccccc---ccCeEEEEccCcccccccccchHHHHHHHHHcCC
Confidence 899999986 6789888765 8999999874 69999999999 799999999999999
Q ss_pred CCCC
Q 014083 427 ANPG 430 (431)
Q Consensus 427 ~nPs 430 (431)
+|||
T Consensus 607 ~nPs 610 (642)
T 3bmx_A 607 AKPK 610 (642)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 9998
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=6.7e-68 Score=543.15 Aligned_cols=362 Identities=17% Similarity=0.180 Sum_probs=276.2
Q ss_pred cccee-eCccccccCCCCCC-ccccccCCCHHHHHHHHHHHHHHHccCCCCCCeeEEeeccccccCC---CCCCCCCccc
Q 014083 7 AGLTY-WSPNVNIFRDPRWG-RGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDL---DNWNGVDRYH 81 (431)
Q Consensus 7 ~G~~~-~aP~~di~~~p~~~-r~~~~fgeDp~lv~~~~~a~i~G~q~~~~g~~gv~a~~KHfpg~g~---~~~~~~~~~~ 81 (431)
.|+|+ |||++||.|||+|| |++|||||||++|++|+.|||+|||+. ||++|+|||||||. ++|.+.+.
T Consensus 141 ~Gin~~fAPvvDv~r~P~~g~ig~rsfGEDP~lv~~~a~A~v~GlQ~~-----gV~a~~KHFpG~G~~~~Dsh~~~~~-- 213 (535)
T 3sql_A 141 LGINWVLAPVLDVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQY-----AVLTTAKHFPGHGDTATDSHLALPT-- 213 (535)
T ss_dssp HTCCEECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHTTS-----SCBCEEEEETCCCSCSCCTTTSCCB--
T ss_pred hCCCEEecCeeccCCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhhc-----ccceeeeeecccCCcccCCccCCCc--
Confidence 49999 99999999999999 789999999999999999999999999 89999999999985 34554443
Q ss_pred cccccCHHHHHhhhcHHHHHHHHhCCcceEeecccccC----CccCcCCHHHHHHHhhhhcCCCcEEECCchhhhhhhcc
Q 014083 82 FNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVN----GKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNT 157 (431)
Q Consensus 82 ~~~~~~~~~l~~~~l~pF~~~i~~g~~~~vM~sy~~v~----g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~~~~~ 157 (431)
+..++++|+|+||+||+++|++| +.+|||||+.+| +.|||+|+++|+++||+||||+|+|||||++|+++...
T Consensus 214 --v~~s~~~L~e~~L~PF~~aI~ag-~~sVM~ah~~v~~lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~ 290 (535)
T 3sql_A 214 --ISHDDTRLNTVELPPFKAAIQGG-VDAVMNAHLMIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQF 290 (535)
T ss_dssp --CCCCHHHHHHTTSHHHHHHHHTT-CSEEEECCCBBTTTBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT
T ss_pred --CCCCHHHHHHHHHHHHHHHHHcC-CCEEEecCccCCCcCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhc
Confidence 34689999999999999999987 899999998886 48999999999999999999999999999999998752
Q ss_pred ccccCChHHHHHHHHHcCCCccCch----hhHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 014083 158 QHYTRTPEEAAADAIKAGLDLDCGP----FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGP 233 (431)
Q Consensus 158 ~~~~~~~~~~~~~al~AG~D~~~~~----~~~~~l~~av~~g~~~~~~l~~av~ril~~k~~~gl~~~~p~~~~~~~~~~ 233 (431)
.+..+++++|++||+||+|.+ .+.+.+.++|++|+++++|||+||+|||++|+++|+|+ .|... . .
T Consensus 291 ----~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~~AV~~G~i~e~rId~av~RIL~~K~~lGl~~-~~~~~----~-~ 360 (535)
T 3sql_A 291 ----AAPDTVVVQAIAAGADILLMPPDVDGAIIAIETAIKTGQLSESRIYESVERIWQAKQKILTAT-PSTFP----Q-G 360 (535)
T ss_dssp ----SCHHHHHHHHHHHTCSBEESCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTSC-CCCTT----T-T
T ss_pred ----CCHHHHHHHHHHCCCCeecCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCC-CCccc----h-h
Confidence 267899999999999997643 35678999999999999999999999999999999998 44321 1 2
Q ss_pred CcCCCHHHHHHHHHHhhcceEEeecCCCCCCCc----CCCCCeEEEECCCCCcccccccccccCCCCCCCHHHHHHHh-h
Q 014083 234 RDVCTPAHQQLALQAAHQGIVLLKNSARTLPLS----TLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRY-A 308 (431)
Q Consensus 234 ~~v~~~~~~~la~e~a~esivLLKN~~~~LPL~----~~~~~kiavig~~a~~~~~~~G~~~~~~~~~~t~~~~l~~~-~ 308 (431)
..+++++|+++|+++|+||||| +++|||+ +++.++|+|||+.++.+.. +|.++..++| ++. +
T Consensus 361 ~~~~~~eh~~lA~e~A~eSiVL----~~~LPL~~~~~~~~~~~laVIG~~a~~~~~-----~g~~~~~~~P----~~~G~ 427 (535)
T 3sql_A 361 ISGDRPETRKTVAMVLERATKH----QKSLVKISSFPDNFARNLIVVDSVLKSPFL-----RPNCPAIAIP----QRHGY 427 (535)
T ss_dssp CCTTCHHHHHHHHHHHHHHCEE----CSSCCCCCCCSTTSEEEEEEESCGGGCTTC-----CTTCHHHHHH----HTTTE
T ss_pred hccCCHHHHHHHHHHHHhCeEE----CCcCCCCcccccCCCCEEEEECCCCCCccc-----CCCCCcccCH----HHcCc
Confidence 3688999999999999999999 3599998 3346799999999876542 2222223333 222 3
Q ss_pred ccceeccCCccccCCcccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeCC
Q 014083 309 KTIHQAGCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCG 388 (431)
Q Consensus 309 ~~~~~~g~~~~~~~~~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV~~~g 388 (431)
.+.+...++ +... ......-.+=+++-.++...+. . +. .+.++.|.+... ---+|+. |
T Consensus 428 ~~~~~~~~~---------~~~~-~~~~~~~~~q~f~r~~~f~~~~-------~-~~--~~~~~~l~~~~~-~~~~~~y-g 485 (535)
T 3sql_A 428 AAEIVELKT---------LPRL-QLEAIPTLIQCFLRGNPFTEKL-------A-DP--IDVLQKIAAQIP-LQGVIFY-G 485 (535)
T ss_dssp EEEEEETTT---------GGGB-CCCSSCEEEEEEECCCSSCSSC-------C-CC--HHHHHHHHHHSC-EEEEEEE-E
T ss_pred eEEEEcCcc---------cccc-ccCCCCeEEEEeecCCCCCCCc-------c-hH--HHHHHHHHhcCc-eeEEEEe-C
Confidence 333332221 0000 0011222334445444433222 2 22 567888876432 2344555 7
Q ss_pred ceeeecCcC-CCCCccEEEEccCcch--hhHHHHHHHhhcC
Q 014083 389 GPVDVSFAK-NDPRIGAILWVGYPGQ--AGGAAIADVLFGR 426 (431)
Q Consensus 389 ~P~~l~~~~-~~~~v~ail~~~~~g~--~~g~A~advL~G~ 426 (431)
+||.+.|+. ..| .|-++|.+|| +++.-+...|++.
T Consensus 486 ~py~~~~~~~~~~---~~p~~~~~gq~~~~q~~~~~~~~~~ 523 (535)
T 3sql_A 486 SPYFLEALQTTLP---EIPWWFSYGQMAIAQAEICTSLWEE 523 (535)
T ss_dssp CCTTHHHHHHHCT---TSCEEEESCCSHHHHHHHHHHTCSS
T ss_pred ChhHHHHHHHHhh---cCCcccCCccCHHHHHHHHHHHhcc
Confidence 999998874 233 4445678888 6777788888885
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=4.1e-55 Score=429.57 Aligned_cols=202 Identities=21% Similarity=0.341 Sum_probs=176.1
Q ss_pred cccee-eCccccccCCCCCCcc-ccccCCCHHHHHHHHHHHHHHHccCCCCCCeeEEeeccccccCCC---CCCCCCccc
Q 014083 7 AGLTY-WSPNVNIFRDPRWGRG-QETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLD---NWNGVDRYH 81 (431)
Q Consensus 7 ~G~~~-~aP~~di~~~p~~~r~-~~~fgeDp~lv~~~~~a~i~G~q~~~~g~~gv~a~~KHfpg~g~~---~~~~~~~~~ 81 (431)
.|||+ |||++||.|||+|||. .|||||||++|++|+.|||+|||+. ||++|+|||||||.. +|.+++.
T Consensus 124 ~Gi~~~~aPv~Dv~r~p~~~rig~RsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpG~g~~~~dsh~~~~~-- 196 (351)
T 3tev_A 124 VGINWNFTPVLDINVNPANPVIGDRAYGSDAARVTRHGRAALAGHTRE-----GVAPCAKHFPGHGDTHQDSHLALPR-- 196 (351)
T ss_dssp HTCCEECCCBCCCCCCTTCCSSGGGSSCSSHHHHHHHHHHHHHHHHTT-----TCEECEEEETCCTTCBCSSTTSCCE--
T ss_pred cCCCEeccceeEeccCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHc-----CCeEEeeeccCCCCCcCCCCcCCCc--
Confidence 49999 9999999999999976 5799999999999999999999999 899999999999853 5555443
Q ss_pred cccccCHHHHHhhhcHHHHHHHHhCCcceEeec---ccccCC-ccCcCCHHHHHHHhhhhcCCCcEEECCchhhhhhhcc
Q 014083 82 FNARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNG-KPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNT 157 (431)
Q Consensus 82 ~~~~~~~~~l~~~~l~pF~~~i~~g~~~~vM~s---y~~v~g-~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~~~~~ 157 (431)
+.+++++|+|.||+||+++ ++| +.+|||| |+.+|| .|||+|+++||++||+||||+|+|||||++|.++...
T Consensus 197 --~~~s~~~L~e~~l~PF~~a-~ag-~~~VM~aHi~y~~id~~~Pa~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~ 272 (351)
T 3tev_A 197 --VSKSRAELDAGELAPFRAL-LPE-TPAIMTAHIVYDALDAEHPATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDAN 272 (351)
T ss_dssp --ECCCHHHHHHTTTHHHHHH-GGG-CSEEEECSCEETTTBSSSCGGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHH
T ss_pred --CCCCHHHHHHhhhHHHHHH-hcC-CCEEEecceEecCCCCCcCccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhc
Confidence 4579999999999999999 766 8999999 778888 6999999999999999999999999999999998753
Q ss_pred ccccCChHHHHHHHHHcCCCccCchh-------hHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 014083 158 QHYTRTPEEAAADAIKAGLDLDCGPF-------LAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQP 227 (431)
Q Consensus 158 ~~~~~~~~~~~~~al~AG~D~~~~~~-------~~~~l~~av~~g~~~~~~l~~av~ril~~k~~~gl~~~~p~~~~ 227 (431)
+ +..+++++|++||+||+|.+. +.+.+.+++++ ++++||+||+|||++|+++|+|+ +||.++
T Consensus 273 --~--~~~~~~~~Al~AG~D~~l~~~~~~~~~~~~~~l~~av~~---~~~~id~av~RIL~~k~~~g~f~-~Py~~~ 341 (351)
T 3tev_A 273 --Y--GRGEAAVRALRAGADLVMALGRREVQQATLAAVAEYVPE---NQAAVATKRERLRALARRFPAQA-DETLDP 341 (351)
T ss_dssp --S--CHHHHHHHHHHHTCSBEECCSSHHHHHHHHHHHHHHGGG---CHHHHHHHHHHHHHHHHHSCCCC-------
T ss_pred --C--CHHHHHHHHHHcCCCEECCCCChhHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhCCCC-CCCCCh
Confidence 2 467999999999999998532 35678899988 99999999999999999999999 888543
No 9
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=100.00 E-value=2e-47 Score=374.14 Aligned_cols=190 Identities=19% Similarity=0.199 Sum_probs=160.6
Q ss_pred cccee-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHccCCCCCCeeEEeeccccccCCC---CCCCCCcccc
Q 014083 7 AGLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLD---NWNGVDRYHF 82 (431)
Q Consensus 7 ~G~~~-~aP~~di~~~p~~~r~~~~fgeDp~lv~~~~~a~i~G~q~~~~g~~gv~a~~KHfpg~g~~---~~~~~~~~~~ 82 (431)
.|||+ |||++||..++.+.++.|||||||++|++|+.|||+|||+. ||++|+|||||||.+ +|.+++..
T Consensus 123 ~Gi~~~~aPv~Dv~~gr~~~iG~rsfgeDP~lv~~~a~A~v~Glq~~-----GV~a~~KHFpG~G~~~~dsh~~~~v~-- 195 (348)
T 4g6c_A 123 CGIDMSFTPVLDLDYGHSKVIGDRAFHRDPRVVTLLAKSLNHGLSLA-----GMANCGKHFPGHGFAEADSHVALPTD-- 195 (348)
T ss_dssp TTCCEECCCBCCCCCSCCTTTGGGSCCSSHHHHHHHHHHHHHHHHHT-----TCCCCEEEETCSSSCCC----CCCEE--
T ss_pred cCCCEeecCccCCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHHhc-----CCceeeCCCCCCCCccCCCCCCCCcC--
Confidence 49999 99999998654445778999999999999999999999999 899999999999864 44444432
Q ss_pred ccccCHHHHHhhhcHHHHHHHHhCCcceEeec---ccccCCccCcCCHHHHHHHhhhhcCCCcEEECCchhhhhhhcccc
Q 014083 83 NARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQH 159 (431)
Q Consensus 83 ~~~~~~~~l~~~~l~pF~~~i~~g~~~~vM~s---y~~v~g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~~~~~~~ 159 (431)
..+.++|++.||+||+.+ ++| +.+|||| |+.+|++|||+|+++|+++||+||||+|+|||||++|.++..
T Consensus 196 --~~~~~el~~~~l~PF~~a-~ag-~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~~--- 268 (348)
T 4g6c_A 196 --DRTLDAILEQDVAPYDWL-GLS-LAAVIPAHVIYTQVDKRPAGFSRVWLQDILRGKLGFTGAIFSDDLSMEAARE--- 268 (348)
T ss_dssp --CCCHHHHHHTTSHHHHHH-GGG-CCEEEECSCEETTTCSSCGGGCHHHHCCCCCCCSCCCSEEEEEETTCGGGGT---
T ss_pred --CCCHHHHHHHHHHHHHHH-hcC-CCeEEecceeecCCCCccccCCHHHHHHHHhhccCCCeEEEccCCchhhhhh---
Confidence 347889999999999999 776 8999999 889999999999999999999999999999999999987642
Q ss_pred ccCChHHHHHHHHHcCCCccCchh---hHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Q 014083 160 YTRTPEEAAADAIKAGLDLDCGPF---LAIHTEGAVRGGLLREEDVNLALAYTITVQMRL 216 (431)
Q Consensus 160 ~~~~~~~~~~~al~AG~D~~~~~~---~~~~l~~av~~g~~~~~~l~~av~ril~~k~~~ 216 (431)
..+..+++++|++|||||+|.+. ....+.++++. ++++++++||++++.+.
T Consensus 269 -~~~~~e~a~~Al~AG~Dm~l~~~~~~~~~~~~~al~~-----~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 269 -GGTLTQAADAALAAGCDMVLVCNQPDAAEVVLNGLKA-----RASAESVRRIKRMRARG 322 (348)
T ss_dssp -TCCHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHCCC-------CHHHHHHHHTTSCCS
T ss_pred -cCCHHHHHHHHHHcCCCEECCCCChHHHHHHHHHhhc-----ccchHHHHHHHHHHhcc
Confidence 35788999999999999998643 45566777754 45789999999988763
No 10
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=100.00 E-value=2.2e-47 Score=373.56 Aligned_cols=188 Identities=17% Similarity=0.226 Sum_probs=159.5
Q ss_pred ccccee-eCccccccC-CCCCCccccccCCCHHHHHHHHHHHHHHHccCCCCCCeeEEeeccccccCCC---CCCCCCcc
Q 014083 6 MAGLTY-WSPNVNIFR-DPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLD---NWNGVDRY 80 (431)
Q Consensus 6 ~~G~~~-~aP~~di~~-~p~~~r~~~~fgeDp~lv~~~~~a~i~G~q~~~~g~~gv~a~~KHfpg~g~~---~~~~~~~~ 80 (431)
..|||+ ||||+||.| +|. +++|||||||++|++|+.|||+|||+. ||++|+|||||||.+ +|.+++..
T Consensus 110 a~Gin~~faPv~Dv~r~~~~--ig~rsfgeDP~lv~~~a~a~v~Glq~~-----GV~a~~KHFpG~G~~~~dsh~~~~v~ 182 (349)
T 4gvf_A 110 AMDIDISFAPVLDVGHISAA--IGERSYHADPAKALAMATRFIDGMHDA-----GMKTTGKHFPGHGAVTADSHKETPCD 182 (349)
T ss_dssp TTTCCEECCCBCCCCSCCTT--TGGGSSCSSHHHHHHHHHHHHHHHHHH-----TCCCEEEEETCCTTCCCCSSSSCCBC
T ss_pred HcCCCEEecCcccCCCCCCC--CcCcCCCCCHHHHHHHHHHHHHHHHHc-----CceeeecccccCCCcccCCCCCCCCC
Confidence 449999 999999987 454 458999999999999999999999999 899999999999964 44444432
Q ss_pred ccccccCHHHHHhhhcHHHHHHHHhCCcceEeec---ccccCCccCcCCHHHHHHHhhhhcCCCcEEECCchhhhhhhcc
Q 014083 81 HFNARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNT 157 (431)
Q Consensus 81 ~~~~~~~~~~l~~~~l~pF~~~i~~g~~~~vM~s---y~~v~g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~~~~~ 157 (431)
..+.++|++.||+||+.+|++|.+.+|||| |+.+|+.|||+|+++|+++||+||||+|+|||||++|.++.
T Consensus 183 ----~~s~~el~~~~l~PF~~aI~~g~~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~-- 256 (349)
T 4gvf_A 183 ----PRPETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAA-- 256 (349)
T ss_dssp ----CCCHHHHHHTHHHHHHHHHHTTCCSEEEECSCBCTTTCSSCGGGCHHHHCCCCCCCTCCCSEEEEEEGGGCCCG--
T ss_pred ----CcCHHHHHHHHhHHHHHHHHcCCCCeEeecccccCCCCCCCCcCCHHHHHHHHHHhcCCCEEEEecCCcccccc--
Confidence 357899999999999999999878999999 88899999999999999999999999999999999998763
Q ss_pred ccccCChHHHHHHHHHcCCCccCchh---hHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 014083 158 QHYTRTPEEAAADAIKAGLDLDCGPF---LAIHTEGAVRGGLLREEDVNLALAYTI 210 (431)
Q Consensus 158 ~~~~~~~~~~~~~al~AG~D~~~~~~---~~~~l~~av~~g~~~~~~l~~av~ril 210 (431)
...+..+++++|++||+||+|.+. ....+.+++.. ++++|+++++.|++
T Consensus 257 --~~~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~al~~--~~~~r~~~~~~r~~ 308 (349)
T 4gvf_A 257 --IMGSYAERAQASLDAGCDMILVCNNRKGAVSVLDNLSP--IKAERVTRLYHKGS 308 (349)
T ss_dssp --GGCCHHHHHHHHHHHTCSEEEECSCHHHHHHHHHHSCC--CCCGGGGGGCCCCC
T ss_pred --ccCCHHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHhhh--ccHHHHHHHhhcCC
Confidence 235788999999999999998643 34456677754 66777777666643
No 11
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=100.00 E-value=1.5e-47 Score=374.38 Aligned_cols=186 Identities=17% Similarity=0.185 Sum_probs=160.8
Q ss_pred ccccee-eCccccccCCCCCCccccccCCCHHHHHHHHHHHHHHHccCCCCCCeeEEeeccccccCCCC---CCCCCccc
Q 014083 6 MAGLTY-WSPNVNIFRDPRWGRGQETPGEDPVLTGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDN---WNGVDRYH 81 (431)
Q Consensus 6 ~~G~~~-~aP~~di~~~p~~~r~~~~fgeDp~lv~~~~~a~i~G~q~~~~g~~gv~a~~KHfpg~g~~~---~~~~~~~~ 81 (431)
..|||+ |||++||.|+ +|.|+.|||||||++|++|+.|||+|||+. ||++|+|||||||.+. |.+++.
T Consensus 107 a~Gi~~~~aPv~Dv~~~-~~~ig~rsfgeDP~lv~~~a~a~v~Glq~~-----gV~a~~KHFpG~G~~~~dsh~~~~v-- 178 (340)
T 2oxn_A 107 AHDVDLSFAPVLDMGFA-CKAIGNRAFGEDVQTVLKHSSAFLRGMKAV-----GMATTGKHFPGHGAVIADSHLETPY-- 178 (340)
T ss_dssp TTTCCEECCCBCCCCSC-STTTGGGSSCSSHHHHHHHHHHHHHHHHHT-----TCCCEEEEETCCTTCCSCCSSSSCB--
T ss_pred HhCCCEEecCccCCCCC-CCcCcCCCCCCCHHHHHHHHHHHHHHHHHC-----CceeeeccCcCCCCccCCCCCCCcc--
Confidence 349999 9999999999 788999999999999999999999999999 8999999999999643 333332
Q ss_pred cccccCHHHHHhhhcHHHHHHHHhCCcceEeec---ccccCCccCcCCHHHHHHHhhhhcCCCcEEECCchhhhhhhccc
Q 014083 82 FNARVSKQDLEDTYNVPFKACVVEGKVASVMCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQ 158 (431)
Q Consensus 82 ~~~~~~~~~l~~~~l~pF~~~i~~g~~~~vM~s---y~~v~g~pa~~s~~~l~~~LR~~~gf~G~v~sD~~~~~~~~~~~ 158 (431)
.+.++| +.||+||+++|++|++.+|||| |+.+|++|||+|+++|+++||+||||+|+|||||++|+++..
T Consensus 179 ----~~~~~l-~~~l~PF~~ai~~g~~~~VM~aHv~y~~id~~Pa~~s~~ll~~lLR~elGF~G~VvSD~l~m~~~~~-- 251 (340)
T 2oxn_A 179 ----DERETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAV-- 251 (340)
T ss_dssp ----CCCSCC-HHHHHHHHHHHHHTCCSEEEECSCBBTTTBSSCGGGCHHHHTCCCCCCTCCCSEEEEEEGGGSCHHH--
T ss_pred ----CCHHHH-HHHHHHHHHHHHcCCCCeeeeccccccccCCcCcccCHHHHHHHhhcccCCCeEEEcccchhhhhhc--
Confidence 123788 9999999999999878999999 888999999999999999999999999999999999987643
Q ss_pred cccCChHHHHHHHHHcCCCccCchh---hHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 014083 159 HYTRTPEEAAADAIKAGLDLDCGPF---LAIHTEGAVRGGLLREEDVNLALAYTI 210 (431)
Q Consensus 159 ~~~~~~~~~~~~al~AG~D~~~~~~---~~~~l~~av~~g~~~~~~l~~av~ril 210 (431)
..+..+++++|++||+||+|.+. ....+.++++ .++++|+++++.|+.
T Consensus 252 --~~~~~ea~~~Al~AG~Dm~l~~~~~~~~~~~~~av~--~~~~~Rl~~~~~~~~ 302 (340)
T 2oxn_A 252 --MGGPVERSHQALVAGCDMILICNKREAAVEVLDNLP--IMEVPQAEALLKKQQ 302 (340)
T ss_dssp --HCSHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHSC--CCCCGGGGGGSCSCC
T ss_pred --cCCHHHHHHHHHHcCCCEEcCCCCHHHHHHHHHHHH--HhhHHHHHHHhhccc
Confidence 24778999999999999998642 3457777774 488899988887664
No 12
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=59.00 E-value=17 Score=31.66 Aligned_cols=56 Identities=21% Similarity=0.275 Sum_probs=40.3
Q ss_pred ccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh-----hCCCCEEEEEeCCcee
Q 014083 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMCGGPV 391 (431)
Q Consensus 325 ~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~-----~~~~pvVvV~~~g~P~ 391 (431)
..+.+..+...+||.+|++.=+ + +..+|+.-+++|+.+.. -.+||+.++..+++++
T Consensus 62 ~~~~~~~~~i~~AD~iVi~tP~---Y--------~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg~~ 122 (199)
T 4hs4_A 62 APVLTMAQQIATADAVVIVTPE---Y--------NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPGMI 122 (199)
T ss_dssp HHHHHHHHHHHHSSEEEEEECC---B--------TTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSSSS
T ss_pred HHHHHHHHHHHhCCEEEEEcCc---c--------CCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCCCc
Confidence 4566778889999999986522 2 45678888899998853 2468888887765543
No 13
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=53.83 E-value=18 Score=28.64 Aligned_cols=75 Identities=17% Similarity=0.128 Sum_probs=42.6
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeCCceeeecCcCC-CC-CccEEEEcc
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKN-DP-RIGAILWVG 409 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV~~~g~P~~l~~~~~-~~-~v~ail~~~ 409 (431)
...+.+|++||.+|.++.. .+.+..-|+... ..+||+|.|- |+.+..++. .. ..+.++ .|
T Consensus 34 ~~I~~~~~vIvL~G~~t~~------------s~wv~~EI~~A~-~~gkpIigV~----~~g~~~~P~~l~~~a~~iV-~W 95 (111)
T 1eiw_A 34 ATPEDADAVIVLAGLWGTR------------RDEILGAVDLAR-KSSKPIITVR----PYGLENVPPELEAVSSEVV-GW 95 (111)
T ss_dssp CCSSSCSEEEEEGGGTTTS------------HHHHHHHHHHHT-TTTCCEEEEC----CSSSSCCCTTHHHHCSEEE-CS
T ss_pred CccccCCEEEEEeCCCcCC------------ChHHHHHHHHHH-HcCCCEEEEE----cCCCCcCCHHHHhhCceec-cC
Confidence 4578899999999865311 233444444433 4689988773 333322221 11 133443 56
Q ss_pred CcchhhHHHHHHHhhcCCCC
Q 014083 410 YPGQAGGAAIADVLFGRANP 429 (431)
Q Consensus 410 ~~g~~~g~A~advL~G~~nP 429 (431)
. .+.+.+.|-|..+|
T Consensus 96 n-----~~~I~~aI~~~~~~ 110 (111)
T 1eiw_A 96 N-----PHCIRDALEDALDV 110 (111)
T ss_dssp C-----HHHHHHHHHHHHCC
T ss_pred C-----HHHHHHHHHhccCC
Confidence 5 36778887777666
No 14
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=44.86 E-value=43 Score=28.86 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=40.1
Q ss_pred ccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh---------------hCCCCEEEEEeCCc
Q 014083 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 389 (431)
Q Consensus 325 ~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~---------------~~~~pvVvV~~~g~ 389 (431)
.++.+..+....+|.+|++.=. + +..+|..=+.+|+.+.. ..+|+++++..+|+
T Consensus 62 ~~~~~~~~~l~~AD~iV~~~P~---y--------~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~ 130 (196)
T 3lcm_A 62 AEMEKYRDLVTWADHLIFIFPI---W--------WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNT 130 (196)
T ss_dssp GGGHHHHHHHHHCSEEEEEEEC---B--------TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECch---h--------hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCC
Confidence 4567777889999999886422 1 45678877888988731 23688888888888
Q ss_pred e
Q 014083 390 P 390 (431)
Q Consensus 390 P 390 (431)
|
T Consensus 131 ~ 131 (196)
T 3lcm_A 131 P 131 (196)
T ss_dssp C
T ss_pred c
Confidence 8
No 15
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=44.38 E-value=31 Score=29.89 Aligned_cols=56 Identities=11% Similarity=0.103 Sum_probs=38.4
Q ss_pred cccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh------hCCCCEEEEEeCCce
Q 014083 324 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK------ASRGPVVLVLMCGGP 390 (431)
Q Consensus 324 ~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~------~~~~pvVvV~~~g~P 390 (431)
++.+.+..+...++|.+|++.=++ +..+|+.=+++|.-+.. -.+||+.+|..++++
T Consensus 55 p~~~~~l~~~i~~aD~~ii~tPeY-----------n~s~pg~LKn~iDwlsr~~~~~~~~gKpv~~v~~S~G~ 116 (190)
T 3u7r_A 55 PESVLRLKDRIEHSDAVLAITPEY-----------NRSYPGMIKNAIDWATRPYGQNSWKGKPAAVIGTSPGV 116 (190)
T ss_dssp CHHHHHHHHHHHTSSEEEEECCCB-----------TTBCCHHHHHHHHHHHCSTTCCTTTTCEEEEEEEESST
T ss_pred CHHHHHHHHHHHhCCcEEEechhh-----------cccCCHHHHHHHHHhcccccCCccCCCEEEEEEeCCch
Confidence 345566778899999999875332 44678888888887741 246888877665443
No 16
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=42.31 E-value=58 Score=27.98 Aligned_cols=56 Identities=21% Similarity=0.289 Sum_probs=38.6
Q ss_pred cccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh-----hCCCCEEEEEeCCce
Q 014083 324 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMCGGP 390 (431)
Q Consensus 324 ~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~-----~~~~pvVvV~~~g~P 390 (431)
+..+.+..+....||.+|++.=+ + +..+|+.=+.+++.+.. -.+||+.++..++++
T Consensus 60 ~~~~~~l~~~i~~AD~iv~~sP~---y--------~~~~~~~lK~~iD~~~~~~~~~~~gK~~~~~~~s~g~ 120 (193)
T 3svl_A 60 PATVEALAEQIRQADGVVIVTPE---Y--------NYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGV 120 (193)
T ss_dssp CHHHHHHHHHHHHSSEEEEEECC---B--------TTBCCHHHHHHHHHHHTSTTCTTTTCEEEEEEECSST
T ss_pred CHHHHHHHHHHHHCCEEEEEecc---c--------CCCCCHHHHHHHHHHhhcCccccCCCeEEEEEeCCCC
Confidence 34567778889999999886422 1 45678877888988863 246787777665443
No 17
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=41.01 E-value=47 Score=27.74 Aligned_cols=54 Identities=9% Similarity=0.057 Sum_probs=35.4
Q ss_pred cHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh-------------hCCCCEEEEEeCCce
Q 014083 326 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-------------ASRGPVVLVLMCGGP 390 (431)
Q Consensus 326 ~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~-------------~~~~pvVvV~~~g~P 390 (431)
++.+..+...++|.+|++.=.. ...+|..=+.+|+.+.. ..+|+++++..+|+|
T Consensus 61 ~~~~~~~~l~~aD~ii~~~P~y-----------~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~ 127 (184)
T 1rli_A 61 DYDSIIERILQCHILIFATPIY-----------WFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDN 127 (184)
T ss_dssp CHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESSC
T ss_pred CHHHHHHHHHhCCEEEEEeCcc-----------ccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCCC
Confidence 4566677889999999864221 34567666778876531 236788877776664
No 18
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=40.39 E-value=54 Score=28.05 Aligned_cols=55 Identities=16% Similarity=0.267 Sum_probs=38.2
Q ss_pred cccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh------------hCCCCEEEEEeCCc
Q 014083 324 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK------------ASRGPVVLVLMCGG 389 (431)
Q Consensus 324 ~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~------------~~~~pvVvV~~~g~ 389 (431)
+.++.+..+...+||.+|++. |.+ +...|+.-+.+++.+.. -.+||++++..+|+
T Consensus 55 ~~~~~~~~~~i~~AD~iV~~s---P~y--------~~~~p~~lK~~iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg 121 (192)
T 3fvw_A 55 HPEVAHAREEVQEADAIWIFS---PVY--------NYAIPGPVKNLLDWLSRSLDLSDPTGPSVLQDKIVTVSSVANG 121 (192)
T ss_dssp CHHHHHHHHHHHHCSEEEEEC---CCB--------TTBCCHHHHHHHHHHTSCSCSSCTTSCCTTTTCEEEEEEESCC
T ss_pred cHHHHHHHHHHHhCCEEEEEC---ccc--------ccCCCHHHHHHHHHhhccccccCCCCCccCCCCEEEEEEeCCC
Confidence 345677788899999998853 222 45678888889988862 24577777766655
No 19
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=40.20 E-value=41 Score=29.39 Aligned_cols=54 Identities=17% Similarity=0.155 Sum_probs=38.4
Q ss_pred HHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh---------------hCCCCEEEEEeCCcee
Q 014083 327 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGGPV 391 (431)
Q Consensus 327 ~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~---------------~~~~pvVvV~~~g~P~ 391 (431)
..+..+....+|.+|++.=.. +..+|..=+.+|+.+.. ..+|+++++..+|+||
T Consensus 83 ~~~~~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~ 151 (211)
T 3p0r_A 83 ADKYLNQFLEADKVVFGFPLW-----------NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVY 151 (211)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCC
Confidence 456677889999998865221 45678777888888742 1367888888778886
No 20
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=40.00 E-value=43 Score=28.39 Aligned_cols=53 Identities=13% Similarity=0.194 Sum_probs=36.2
Q ss_pred HHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh---------------hCCCCEEEEEeCCcee
Q 014083 328 GAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGGPV 391 (431)
Q Consensus 328 ~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~---------------~~~~pvVvV~~~g~P~ 391 (431)
.+..+....+|.+|++. |.+ ...+|..-+.+|+.+.. ..+|+++++..+|+++
T Consensus 78 ~~~~~~l~~aD~iv~~~---P~y--------~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~ 145 (201)
T 1t5b_A 78 DELIAELKAHDVIVIAA---PMY--------NFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIH 145 (201)
T ss_dssp HHHHHHHHHCSEEEEEC---CCB--------TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCC
T ss_pred HHHHHHHHhCCEEEEEe---Ccc--------cCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCC
Confidence 44567788999988753 222 34567777888988852 2467888887777765
No 21
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=39.21 E-value=43 Score=28.80 Aligned_cols=56 Identities=18% Similarity=0.172 Sum_probs=38.0
Q ss_pred cHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh---------------hCCCCEEEEEeCCce
Q 014083 326 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGGP 390 (431)
Q Consensus 326 ~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~---------------~~~~pvVvV~~~g~P 390 (431)
++.+..+....||.+|++.=. + +..+|..=+.+|+.+.. ..+|+++++..+|++
T Consensus 84 ~~~~~~~~l~~aD~iv~~~P~---y--------~~~~pa~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~~ 152 (208)
T 2hpv_A 84 RFNELTDQFLSADKVVIANPM---W--------NLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGF 152 (208)
T ss_dssp HHHHHHHHHHHCSEEEEEEEC---B--------TTBCCHHHHHHHHHHCCBTTTEEEETTEEEESCCSCEEEEEEEESSC
T ss_pred HHHHHHHHHHhCCEEEEEecc---c--------cCCCCHHHHHHHHHHhcCCcEeecCCCCCccCCCCCeEEEEEecCCC
Confidence 345566788899999886422 1 45678777888988752 136777777776776
Q ss_pred ee
Q 014083 391 VD 392 (431)
Q Consensus 391 ~~ 392 (431)
+.
T Consensus 153 ~~ 154 (208)
T 2hpv_A 153 YE 154 (208)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 22
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=38.78 E-value=39 Score=29.17 Aligned_cols=56 Identities=11% Similarity=0.115 Sum_probs=38.7
Q ss_pred cccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh--hCCCCEEEEEeCCce
Q 014083 324 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK--ASRGPVVLVLMCGGP 390 (431)
Q Consensus 324 ~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~--~~~~pvVvV~~~g~P 390 (431)
+.++.+..+....||.+|++.=.+ +..+|+.=+.+|..+.. -.+||++++..+|.+
T Consensus 73 ~~~~~~~~~~i~~AD~ivi~sP~Y-----------~~~~~~~lK~~iD~~~~~~l~gK~~~~v~t~G~~ 130 (191)
T 3k1y_A 73 TTKLEEITSALSASDGLVVATPVF-----------KASYTGLFKMFFDILDTDALTGMPTIIAATAGSA 130 (191)
T ss_dssp CHHHHHHHHHHHHCSEEEEEEECB-----------TTBSCHHHHHHHHHSCTTTTTTCEEEEEEEESSS
T ss_pred CHHHHHHHHHHHHCCEEEEEcCcc-----------CCcCcHHHHHHHHHhhhhhcCCCEEEEEEeCCCc
Confidence 356777888999999999865322 45677777888887642 246888877665544
No 23
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=38.12 E-value=30 Score=29.49 Aligned_cols=55 Identities=15% Similarity=0.206 Sum_probs=36.3
Q ss_pred ccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh-----hCCCCEEEEEeCCce
Q 014083 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMCGGP 390 (431)
Q Consensus 325 ~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~-----~~~~pvVvV~~~g~P 390 (431)
.++.+..+...++|.+|++. |.+ +..+|+.=+.+|+.+.. ..+||++++..+|++
T Consensus 61 ~~~~~~~~~l~~aD~ii~~s---P~y--------~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~gg~ 120 (193)
T 1rtt_A 61 PAVERFREQIRAADALLFAT---PEY--------NYSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAGR 120 (193)
T ss_dssp HHHHHHHHHHHHCSEEEEEC---CEE--------TTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEECSST
T ss_pred HHHHHHHHHHHhCCEEEEEc---ccc--------ccCcCHHHHHHHHHhccccCcccCCCeEEEEEeCCCC
Confidence 34566677888999988753 222 23467767788888753 246777777666444
No 24
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=37.22 E-value=60 Score=28.81 Aligned_cols=108 Identities=17% Similarity=0.191 Sum_probs=64.3
Q ss_pred cCCCHHHHHHHHHHHHHH-HccCC-----CCC-CeeEEeeccccccCCCCCCCCCccccccccCHHHHHhhhcHHHHHHH
Q 014083 31 PGEDPVLTGKYAASYVRG-LQGNT-----GSR-LKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACV 103 (431)
Q Consensus 31 fgeDp~lv~~~~~a~i~G-~q~~~-----~g~-~gv~a~~KHfpg~g~~~~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i 103 (431)
-++||+..-.++.|.++| +.--. ++. .-+-...|+||.- ........+.++ ++.++
T Consensus 20 r~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~---------~IGAGTVlt~~~--------a~~ai 82 (217)
T 3lab_A 20 VIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEA---------IVGAGTVCTADD--------FQKAI 82 (217)
T ss_dssp CCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTS---------EEEEECCCSHHH--------HHHHH
T ss_pred EcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCC---------eEeeccccCHHH--------HHHHH
Confidence 367888888888888875 11100 000 0112223455532 111111234333 35788
Q ss_pred HhCCcceEeecccccCCccCcCCHHHHHHHhhhhc--CCCcEEECCchhhhhhhccccccCChHHHHHHHHHcCCCcc
Q 014083 104 VEGKVASVMCSYNQVNGKPTCADPDILKNTIHGQW--RLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLD 179 (431)
Q Consensus 104 ~~g~~~~vM~sy~~v~g~pa~~s~~~l~~~LR~~~--gf~G~v~sD~~~~~~~~~~~~~~~~~~~~~~~al~AG~D~~ 179 (431)
++| +.-|++ |. ++++++.--.+..+ .++|.++.++. |+.| +.+|+++|.|++
T Consensus 83 ~AG-A~fivs--------P~-~~~evi~~~~~~~v~~~~~~~~~PG~~-------------TptE-~~~A~~~Gad~v 136 (217)
T 3lab_A 83 DAG-AQFIVS--------PG-LTPELIEKAKQVKLDGQWQGVFLPGVA-------------TASE-VMIAAQAGITQL 136 (217)
T ss_dssp HHT-CSEEEE--------SS-CCHHHHHHHHHHHHHCSCCCEEEEEEC-------------SHHH-HHHHHHTTCCEE
T ss_pred HcC-CCEEEe--------CC-CcHHHHHHHHHcCCCccCCCeEeCCCC-------------CHHH-HHHHHHcCCCEE
Confidence 888 776765 32 68888876666655 68999998864 3444 678899999987
No 25
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=36.25 E-value=18 Score=34.45 Aligned_cols=57 Identities=19% Similarity=0.277 Sum_probs=28.3
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCC-C-hhHHHHHHHHHhhCCCCEEEEEeCCceeee
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLL-P-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 393 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l-~-~~q~~li~~l~~~~~~pvVvV~~~g~P~~l 393 (431)
+..+++|+||++.|.. ..+|.+|.++-- + +--.++++.+.+.+. +.++++. +||+++
T Consensus 72 ~a~~~aDiVvi~ag~~---~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvv-tNPvdi 130 (326)
T 3vku_A 72 SDAKDADLVVITAGAP---QKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVA-ANPVDI 130 (326)
T ss_dssp GGGTTCSEEEECCCCC-------------------CHHHHHHHHHTTTC-CSEEEEC-SSSHHH
T ss_pred HHhcCCCEEEECCCCC---CCCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEc-cCchHH
Confidence 3578899999987753 245556654321 1 112456667766443 4555545 599887
No 26
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=35.98 E-value=57 Score=28.82 Aligned_cols=54 Identities=13% Similarity=0.291 Sum_probs=37.6
Q ss_pred HHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh---------------h-CCCCEEEEEeCCce
Q 014083 327 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------A-SRGPVVLVLMCGGP 390 (431)
Q Consensus 327 ~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~---------------~-~~~pvVvV~~~g~P 390 (431)
..+..+....+|.+|+..=.. +..+|..=+.+++.+.. . .+|+++++..+|++
T Consensus 85 ~~~l~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~~g~~f~~~~~g~~~~l~~gK~~~~i~t~gg~ 153 (223)
T 3u7i_A 85 MSEILQQFKSANTYVIVLPLH-----------NFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGI 153 (223)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCCBTTTEEECSSCEEESCCSSCEEEEEEECSSC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------hccCCHHHHHHHHHHhhcCCceecCCCCCcccccCCCEEEEEEeCCCC
Confidence 455677889999998865322 45678777888888742 1 35777877777776
Q ss_pred e
Q 014083 391 V 391 (431)
Q Consensus 391 ~ 391 (431)
|
T Consensus 154 ~ 154 (223)
T 3u7i_A 154 Y 154 (223)
T ss_dssp C
T ss_pred C
Confidence 5
No 27
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=34.13 E-value=12 Score=36.00 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=30.4
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhH----HHHHHHHHhhCCCCEEEEEeCCceeee
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 393 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q----~~li~~l~~~~~~pvVvV~~~g~P~~l 393 (431)
++.+++|+||++-|... ++|.+|.++ =..- +++.+.+.+...+.++|++. +||++.
T Consensus 96 ~a~~~advVvi~aG~pr---kpGmtR~DL--l~~Na~I~~~~~~~i~~~a~~~~~vlvv-sNPvd~ 155 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR---KAGMERKDL--LEMNARIFKEQGEAIAAVAASDCRVVVV-GNPANT 155 (345)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHH--HHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHH--HHHhHHHHHHHHHHHHhhccCceEEEEe-CCCcch
Confidence 45789999998766432 445554332 1111 23344555533334554444 599875
No 28
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=33.99 E-value=19 Score=34.31 Aligned_cols=54 Identities=19% Similarity=0.120 Sum_probs=32.5
Q ss_pred hhcCCEEEEEeeCCCCcccccCCCCCCCCChhH----HHHHHHHHhhCCCCEEEEEeCCceeeec
Q 014083 334 ARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDVS 394 (431)
Q Consensus 334 a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q----~~li~~l~~~~~~pvVvV~~~g~P~~l~ 394 (431)
.+++|+||++.|... .+|.+|.++ -..- .++++.+.+.+ .+.++++. +||.++.
T Consensus 87 ~~daDiVIitaG~p~---kpG~tR~dl--l~~N~~I~k~i~~~I~k~~-P~a~ilvv-tNPvdi~ 144 (330)
T 3ldh_A 87 SAGSKLVVITAGARQ---QEGESRLNL--VQRNVNIFKFIIPNIVKHS-PDCLKELH-PELGTDK 144 (330)
T ss_dssp CSSCSEEEECCSCCC---CSSCCTTGG--GHHHHHHHHHHHHHHHHHC-TTCEEEEC-SSSHHHH
T ss_pred hCCCCEEEEeCCCCC---CCCCCHHHH--HHhhHHHHHHHHHHHHhhC-CCceEEeC-CCccHHH
Confidence 688999999887542 456666443 2222 34455666553 34555555 4998873
No 29
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=33.48 E-value=27 Score=33.23 Aligned_cols=56 Identities=18% Similarity=0.323 Sum_probs=31.9
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhH----HHHHHHHHhhCCCCEEEEEeCCceeee
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 393 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q----~~li~~l~~~~~~pvVvV~~~g~P~~l 393 (431)
+..+++|+||++.|.. + .+|.+|.++ -..- +++++++.+...+-+++++. +||.++
T Consensus 75 ~~~~daDvVvitAg~p-r--kpG~tR~dl--l~~N~~i~~~i~~~i~~~~~~~~~vivv-sNPvd~ 134 (333)
T 5mdh_A 75 IAFKDLDVAILVGSMP-R--RDGMERKDL--LKANVKIFKCQGAALDKYAKKSVKVIVV-GNPANT 134 (333)
T ss_dssp HHTTTCSEEEECCSCC-C--CTTCCTTTT--HHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEEeCCCC-C--CCCCCHHHH--HHHHHHHHHHHHHHHHHhCCCCeEEEEc-CCchHH
Confidence 4578999999876643 2 355565443 2222 34556666544323334445 499887
No 30
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=32.86 E-value=1.9e+02 Score=26.87 Aligned_cols=130 Identities=8% Similarity=0.073 Sum_probs=66.9
Q ss_pred HHHHHHHHHHh--hcceEEeecCCCCCCCcCCCCCeEEEECCCCCcccccccccccCCCCCCCHHHHHHHhhcc--ceec
Q 014083 239 PAHQQLALQAA--HQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYAKT--IHQA 314 (431)
Q Consensus 239 ~~~~~la~e~a--~esivLLKN~~~~LPL~~~~~~kiavig~~a~~~~~~~G~~~~~~~~~~t~~~~l~~~~~~--~~~~ 314 (431)
||-.-+.-++. ...+.++++...+--|... ++++++.....+.. .+..+.+.|++.++. .+..
T Consensus 125 pEV~G~~g~~~~~~~~~~vV~~~ed~~~l~~~--~kv~~vsQTT~s~~-----------~~~~iv~~L~~r~p~~~~~~t 191 (297)
T 3dnf_A 125 PEVIGTLGYLRACNGKGIVVETLEDIGEALKH--ERVGIVAQTTQNEE-----------FFKEVVGEIALWVKEVKVINT 191 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGGGGGGGC--SEEEEEECTTCCHH-----------HHHHHHHHHHHHSSEEEEECC
T ss_pred ceEEeeccccccCCCcEEEEcCHHHHHhcCCC--CcEEEEEecCCcHH-----------HHHHHHHHHHHhCCCCCCCCC
Confidence 45555555542 4567888887655444322 68999863321110 112344566665431 1211
Q ss_pred cCCccccCCcccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeCCceeeec
Q 014083 315 GCFGVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVS 394 (431)
Q Consensus 315 g~~~~~~~~~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV~~~g~P~~l~ 394 (431)
-|.. +...-+.+.+.+++.|++||+-|.+ +.+-..|.+-..+ .++|+..| -+..=++..
T Consensus 192 IC~A----T~~RQ~av~~la~~~D~miVVGg~n---------------SSNT~rL~eia~~-~~~~ty~I-e~~~el~~~ 250 (297)
T 3dnf_A 192 ICNA----TSLRQESVKKLAPEVDVMIIIGGKN---------------SGNTRRLYYISKE-LNPNTYHI-ETAEELQPE 250 (297)
T ss_dssp CCSH----HHHHHHHHHHHGGGSSEEEEESCTT---------------CHHHHHHHHHHHH-HCSSEEEE-SSGGGCCGG
T ss_pred ccHH----HHHHHHHHHHHHhhCCEEEEECCCC---------------CchhHHHHHHHHh-cCCCEEEe-CChHHCCHH
Confidence 2211 1223345567888999988764432 2334555555444 45687655 333445556
Q ss_pred CcCCCCCccEE
Q 014083 395 FAKNDPRIGAI 405 (431)
Q Consensus 395 ~~~~~~~v~ai 405 (431)
|+. .++.|
T Consensus 251 wl~---~~~~V 258 (297)
T 3dnf_A 251 WFR---GVKRV 258 (297)
T ss_dssp GGT---TCSEE
T ss_pred HhC---CCCEE
Confidence 664 55554
No 31
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=32.15 E-value=90 Score=27.58 Aligned_cols=55 Identities=9% Similarity=0.027 Sum_probs=36.9
Q ss_pred ccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh------hCCCCEEEEEeCCce
Q 014083 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK------ASRGPVVLVLMCGGP 390 (431)
Q Consensus 325 ~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~------~~~~pvVvV~~~g~P 390 (431)
.++.+..+...+||.+|+..=.. +..+|+.=+.+|+.+.. -.+||++++..+|++
T Consensus 68 ~~~~~~~~~l~~AD~iI~~sP~y-----------~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g~~ 128 (242)
T 1sqs_A 68 DDGGVIKKELLESDIIIISSPVY-----------LQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESN 128 (242)
T ss_dssp STHHHHHHHHHHCSEEEEEEEEC-----------SSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEESSC
T ss_pred HHHHHHHHHHHHCCEEEEEcccc-----------ccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCCCC
Confidence 45677778899999999865322 34567777788887631 236777777665543
No 32
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=31.86 E-value=93 Score=26.39 Aligned_cols=57 Identities=14% Similarity=0.101 Sum_probs=39.9
Q ss_pred cccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh----------hCCCCEEEEEeCCcee
Q 014083 324 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK----------ASRGPVVLVLMCGGPV 391 (431)
Q Consensus 324 ~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~----------~~~~pvVvV~~~g~P~ 391 (431)
..++.+..+....||.+|+..=. + .+..|..=+.+++.+.. -.+|+++++..+|+|.
T Consensus 39 ~~D~~~~~~~l~~aD~iV~~~P~---y--------~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~ 105 (177)
T 3ha2_A 39 DFNVEQEQSLLLQNDRIILEFPL---Y--------WYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNG 105 (177)
T ss_dssp TCCHHHHHHHHHTCSEEEEEEEC---B--------TTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCG
T ss_pred cccHHHHHHHHHhCCEEEEECCh---h--------hccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCCh
Confidence 35577778899999999886421 1 35567777788887631 2468888888888874
No 33
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=31.54 E-value=10 Score=35.52 Aligned_cols=55 Identities=15% Similarity=0.347 Sum_probs=31.7
Q ss_pred HhhcCCEEEEEeeCCCCcccccCCCCCCCCChhH----HHHHHHHHhhCCCCEEEEEeCCceeeec
Q 014083 333 AARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDVS 394 (431)
Q Consensus 333 ~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q----~~li~~l~~~~~~pvVvV~~~g~P~~l~ 394 (431)
..+.+|+||++.|... ++|.+|.++- ..- +++++++++.+. +.++++. +||+|..
T Consensus 66 ~~~~aDvVvitAG~pr---kpGmtR~dLl--~~Na~I~~~i~~~i~~~~p-~aivlvv-sNPvd~~ 124 (294)
T 2x0j_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLA--HKNAGIIKDIAKKIVENAP-ESKILVV-TNPMDVM 124 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSSCHHHHH--HHHHHHHHHHHHHHHTTST-TCEEEEC-SSSHHHH
T ss_pred HhCCCCEEEEecCCCC---CCCCchHHHH--HHHHHHHHHHHHHHHhcCC-ceEEEEe-cCcchhh
Confidence 4788999998877542 4455553321 111 244556666544 4455545 4999863
No 34
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=30.72 E-value=85 Score=28.57 Aligned_cols=55 Identities=22% Similarity=0.201 Sum_probs=38.5
Q ss_pred ccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh---------------hCCCCEEEEEeCCc
Q 014083 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 389 (431)
Q Consensus 325 ~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~---------------~~~~pvVvV~~~g~ 389 (431)
.++.+..+....||.+|+..=.. ++.+|..=+.+|+.+.. ..+|++++++.+|+
T Consensus 82 dd~~~~~~~l~~AD~IV~~~P~y-----------~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg 150 (273)
T 1d4a_A 82 PDIVAEQKKLEAADLVIFQFPLQ-----------WFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGG 150 (273)
T ss_dssp HHHHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECchh-----------hccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCC
Confidence 34666677889999999865222 45667777788887732 13688888888888
Q ss_pred e
Q 014083 390 P 390 (431)
Q Consensus 390 P 390 (431)
|
T Consensus 151 ~ 151 (273)
T 1d4a_A 151 S 151 (273)
T ss_dssp C
T ss_pred C
Confidence 7
No 35
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=30.27 E-value=10 Score=35.47 Aligned_cols=57 Identities=16% Similarity=0.324 Sum_probs=31.1
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCC--hhHHHHHHHHHhhCCCCEEEEEeCCceeee
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLP--GRQQELVSRVAKASRGPVVLVLMCGGPVDV 393 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~--~~q~~li~~l~~~~~~pvVvV~~~g~P~~l 393 (431)
++.+++|+||++.|... ++|.+|.++-.. +--.++++.+.+.+ ...++++.+ ||+++
T Consensus 65 ~a~~~aDiVViaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvs-NPvd~ 123 (294)
T 1oju_A 65 SLLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVT-NPMDV 123 (294)
T ss_dssp GGGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECS-SSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeC-CcchH
Confidence 45788999999877532 344444332100 00123445565543 345655554 99987
No 36
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=28.23 E-value=89 Score=26.92 Aligned_cols=57 Identities=14% Similarity=0.159 Sum_probs=39.8
Q ss_pred cccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh-----------hCCCCEEEEEeCCcee
Q 014083 324 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----------ASRGPVVLVLMCGGPV 391 (431)
Q Consensus 324 ~~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~-----------~~~~pvVvV~~~g~P~ 391 (431)
..++.+..+....||.+|+..=. + .+.+|..=+.+++.+.. -.+|+++++..+|+|-
T Consensus 46 ~~dv~~~~~~l~~AD~iv~~~P~---y--------~~~~pa~lK~~iDrv~~~g~~y~~~g~~l~gK~~~~~~t~G~~~ 113 (192)
T 3f2v_A 46 KIDVAAEQKLIETHDSLVWQFPI---Y--------WFNCPPLLKQWLDEVLTYGWAYGSKGKALKGRKIALAVSLGAPA 113 (192)
T ss_dssp CCCHHHHHHHHHTSSSEEEEEEC---B--------TTBCCHHHHHHHHHHSCBTTTBSSSCCSSTTCEEEEEEEESSCG
T ss_pred chhHHHHHHHHHhCCEEEEEcCh---h--------hcCCCHHHHHHHHHHhhcCccccCCCCCCCCCEEEEEEeCCCCh
Confidence 34577778889999999885421 1 35677777888888731 2367888887878873
No 37
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=27.16 E-value=93 Score=25.79 Aligned_cols=55 Identities=20% Similarity=0.219 Sum_probs=33.3
Q ss_pred ccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHH--hhCCCCEEEEEeCCce
Q 014083 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA--KASRGPVVLVLMCGGP 390 (431)
Q Consensus 325 ~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~--~~~~~pvVvV~~~g~P 390 (431)
..+.+..+...++|.+|++.=++ +..+|+.=+.+++.+. .-.+||+.++..+++.
T Consensus 52 ~~~~~~~~~i~~aD~ii~~tP~y-----------~~~~p~~lk~~lD~l~~~~~~gK~~~~~~~sgg~ 108 (174)
T 3gfs_A 52 LKVQELKQRVTKADAIVLLSPEY-----------HSGMSGALKNALDFLSSEQFKYKPVALLAVAGGG 108 (174)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECS-----------SSSCCHHHHHHHHTCCHHHHTTCEEEEEEECCST
T ss_pred HHHHHHHHHHHHCCEEEEEcCCc-----------CCCCCHHHHHHHHHhCHhhhCCCcEEEEEECCCC
Confidence 34566667788888888754222 3456766677776542 1246777776655443
No 38
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=26.93 E-value=47 Score=31.47 Aligned_cols=120 Identities=11% Similarity=0.153 Sum_probs=58.4
Q ss_pred ceEEeecCCCC--CCCcCCCCCeEEEECCCCCcccccccccccCCCCCCCHHHHHHHhhccceeccCCccccC-CcccHH
Q 014083 252 GIVLLKNSART--LPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYAKTIHQAGCFGVACN-GNQLIG 328 (431)
Q Consensus 252 sivLLKN~~~~--LPL~~~~~~kiavig~~a~~~~~~~G~~~~~~~~~~t~~~~l~~~~~~~~~~g~~~~~~~-~~~~~~ 328 (431)
.+.++++...+ ||+.. .++++++.....+.. .+..+.+.|++.++..+.+-. +.-|. +...-+
T Consensus 152 ~~~vV~~~edv~~l~~~~--~~kv~~vsQTT~s~~-----------~~~~iv~~L~~r~p~i~~~~~-ntIC~AT~~RQ~ 217 (328)
T 3szu_A 152 GMYLVESPDDVWKLTVKN--EEKLSFMTQTTLSVD-----------DTSDVIDALRKRFPKIVGPRK-DDICYATTNRQE 217 (328)
T ss_dssp CEEEECSHHHHHHCCCSC--TTSEEEEECTTSCHH-----------HHHHHHHHHHHHCTTCBCCSS-CSCCHHHHHHHH
T ss_pred cEEEECCHHHHHhCCcCC--CCeEEEEEecCCcHH-----------HHHHHHHHHHHhCcccccCCC-CCcCHHHHHHHH
Confidence 46667765433 55532 257998863321110 112344566665432111100 11111 122334
Q ss_pred HHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeCCceeeecCcCCCCCccEE
Q 014083 329 AAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAI 405 (431)
Q Consensus 329 ~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV~~~g~P~~l~~~~~~~~v~ai 405 (431)
.+.+.+++.|++||+-|.+ +.+-..|.+-.. ..++|+..| -+..=++..|+. .++.|
T Consensus 218 av~~lA~~vD~miVVGg~n---------------SSNT~rL~eia~-~~g~~ty~I-e~~~el~~~wl~---g~~~V 274 (328)
T 3szu_A 218 AVRALAEQAEVVLVVGSKN---------------SSNSNRLAELAQ-RMGKRAFLI-DDAKDIQEEWVK---EVKCV 274 (328)
T ss_dssp HHHHHHHHCSEEEEECCTT---------------CHHHHHHHHHHH-HTTCEEEEE-SSGGGCCHHHHT---TCSEE
T ss_pred HHHHHHHhCCEEEEeCCCC---------------CchHHHHHHHHH-HhCCCEEEe-CChHHCCHHHhC---CCCEE
Confidence 5567888999998764432 223445555444 456676654 333445556664 45544
No 39
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=26.80 E-value=1.3e+02 Score=27.75 Aligned_cols=109 Identities=21% Similarity=0.187 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHccCCCCCCeeEEeeccccccCCCCCCCCCccccccccCHHHHHhhhcHHHHHHHHhCCc--------c
Q 014083 38 TGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKV--------A 109 (431)
Q Consensus 38 v~~~~~a~i~G~q~~~~g~~gv~a~~KHfpg~g~~~~~~~~~~~~~~~~~~~~l~~~~l~pF~~~i~~g~~--------~ 109 (431)
++..++.|++-+++. .++.|=|..||- |.++ +.++..|+. +
T Consensus 116 IAT~t~~~v~~~~~~-----~i~~TRKt~Pgl-------------------r~~~-------kyAv~~GGg~nHR~gL~d 164 (285)
T 1o4u_A 116 VATTTRRFAEKLKHA-----KIAATRKILPGL-------------------GVLQ-------KIAVVHGGGDPHRLDLSG 164 (285)
T ss_dssp HHHHHHHHHHTCSSS-----EEECCSCCCTTT-------------------HHHH-------HHHHHHHTCC--------
T ss_pred HHHHHHHHHHHhCCC-----EEeecCCCChhh-------------------HHHH-------HHHHHhCCCCCccCCCcc
Confidence 456677777776664 688888888873 1122 223333321 3
Q ss_pred eEeecccccCCccCcCC-HHHHHHHhhhhcCCC-cEEECCchhhhhhhccccccCChHHHHHHHHHcCCCccCchhhHHH
Q 014083 110 SVMCSYNQVNGKPTCAD-PDILKNTIHGQWRLD-GYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPFLAIH 187 (431)
Q Consensus 110 ~vM~sy~~v~g~pa~~s-~~~l~~~LR~~~gf~-G~v~sD~~~~~~~~~~~~~~~~~~~~~~~al~AG~D~~~~~~~~~~ 187 (431)
+||.--|.+ .++.+ ...+ ...|+..+++ -+.+ ++ .+. +-+..|+++|.|++|...
T Consensus 165 ~vlikdnHi---~~~G~i~~av-~~ar~~~~~~~~I~V-EV-------------~tl-eea~eA~~aGaD~I~LDn---- 221 (285)
T 1o4u_A 165 CVMIKDNHL---KMYGSAERAV-QEVRKIIPFTTKIEV-EV-------------ENL-EDALRAVEAGADIVMLDN---- 221 (285)
T ss_dssp CEEECHHHH---HHHSSHHHHH-HHHHTTSCTTSCEEE-EE-------------SSH-HHHHHHHHTTCSEEEEES----
T ss_pred cEEEchhHH---hhcCCHHHHH-HHHHHhCCCCceEEE-Ee-------------CCH-HHHHHHHHcCCCEEEECC----
Confidence 455542222 12222 2334 4567777774 3433 21 122 446788999999987543
Q ss_pred HHHHHhCCCCCHHHHHHHHHHH
Q 014083 188 TEGAVRGGLLREEDVNLALAYT 209 (431)
Q Consensus 188 l~~av~~g~~~~~~l~~av~ri 209 (431)
.+.+.+.++++++
T Consensus 222 ---------~~~e~l~~av~~l 234 (285)
T 1o4u_A 222 ---------LSPEEVKDISRRI 234 (285)
T ss_dssp ---------CCHHHHHHHHHHH
T ss_pred ---------CCHHHHHHHHHHh
Confidence 4667777777665
No 40
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=26.74 E-value=17 Score=35.24 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=30.2
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHH----HHHHHHHhhCCCCEEEEEeCCceeeec
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQ----ELVSRVAKASRGPVVLVLMCGGPVDVS 394 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~----~li~~l~~~~~~pvVvV~~~g~P~~l~ 394 (431)
+..+++|+||++-|.. + ++|.+|.++ -..-. ++++.+.+......++++. +||+++.
T Consensus 104 ~~~~daDvVVitag~p-r--kpG~tR~DL--l~~N~~I~k~i~~~i~~~a~p~~ivlVv-sNPvD~~ 164 (375)
T 7mdh_A 104 EVFEDVDWALLIGAKP-R--GPGMERAAL--LDINGQIFADQGKALNAVASKNVKVLVV-GNPCNTN 164 (375)
T ss_dssp HHTTTCSEEEECCCCC-C--CTTCCHHHH--HHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHHH
T ss_pred HHhCCCCEEEEcCCCC-C--CCCCCHHHH--HHHHHHHHHHHHHHHHHhcCCCeEEEEe-cCchhHH
Confidence 5678999999876542 2 345444322 11111 2333455432334555545 5998763
No 41
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=26.54 E-value=17 Score=34.68 Aligned_cols=54 Identities=24% Similarity=0.359 Sum_probs=31.8
Q ss_pred HhhcCCEEEEEeeCCCCcccccCCCCCCCCChhH----HHHHHHHHhhCCCCEEEEEeCCceeee
Q 014083 333 AARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 393 (431)
Q Consensus 333 ~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q----~~li~~l~~~~~~pvVvV~~~g~P~~l 393 (431)
..+++|+||++.|... ++|.+|.++ -..- .++.+.+.+.+ ...++++. +||+++
T Consensus 84 ~~~~aDiVvi~aG~~~---kpG~tR~dL--~~~N~~I~~~i~~~i~~~~-p~a~vlvv-tNPvdi 141 (331)
T 4aj2_A 84 VTANSKLVIITAGARQ---QEGESRLNL--VQRNVNIFKFIIPNVVKYS-PQCKLLIV-SNPVDI 141 (331)
T ss_dssp GGTTEEEEEECCSCCC---CTTCCGGGG--HHHHHHHHHHHHHHHHHHC-TTCEEEEC-SSSHHH
T ss_pred HhCCCCEEEEccCCCC---CCCccHHHH--HHHHHHHHHHHHHHHHHHC-CCeEEEEe-cChHHH
Confidence 4788999998877542 456555443 2222 34455566543 34555545 599887
No 42
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=26.37 E-value=79 Score=28.46 Aligned_cols=55 Identities=9% Similarity=0.101 Sum_probs=36.9
Q ss_pred ccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh-------hCCCCEEEEEeCCce
Q 014083 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-------ASRGPVVLVLMCGGP 390 (431)
Q Consensus 325 ~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~-------~~~~pvVvV~~~g~P 390 (431)
..+.+..+....||.+|++.=++ +..+|+.=+.+|..+.. -.+||+.++..+|++
T Consensus 87 d~~~~l~~~i~~AD~iI~~sP~Y-----------n~sipa~LKn~iD~l~~~~~~~~~l~gK~v~~v~tsG~~ 148 (247)
T 2q62_A 87 PKVQELRELSIWSEGQVWVSPER-----------HGAMTGIMKAQIDWIPLSTGSIRPTQGKTLAVMQVSGGS 148 (247)
T ss_dssp HHHHHHHHHHHHCSEEEEEEECS-----------SSSCCHHHHHHHHTSCSCBTTBCSSTTCEEEEEEECSSS
T ss_pred HHHHHHHHHHHHCCEEEEEeCCC-----------CCCccHHHHHHHHHhhhccCcccccCCCEEEEEEeCCCc
Confidence 34677788899999999865322 34567777778877632 236777777665543
No 43
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=26.27 E-value=1.2e+02 Score=26.83 Aligned_cols=55 Identities=20% Similarity=0.239 Sum_probs=37.1
Q ss_pred ccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh---------------hCCCCEEEEEeCCc
Q 014083 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 389 (431)
Q Consensus 325 ~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~---------------~~~~pvVvV~~~g~ 389 (431)
.++.+..+....+|.+|+..=. + ...+|..=+.+++.+.. ..+|++++++.+|+
T Consensus 81 dd~~~~~~~l~~aD~iv~~~P~---y--------~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~ 149 (228)
T 3tem_A 81 SDITDEQKKVREADLVIFQFPL---Y--------WFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGG 149 (228)
T ss_dssp HHHHHHHHHHHHCSEEEEEEEC---B--------TTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECCh---h--------hcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCC
Confidence 4455666788999999886422 1 34567777778887631 24678888878777
Q ss_pred e
Q 014083 390 P 390 (431)
Q Consensus 390 P 390 (431)
|
T Consensus 150 ~ 150 (228)
T 3tem_A 150 T 150 (228)
T ss_dssp C
T ss_pred C
Confidence 6
No 44
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=26.26 E-value=17 Score=34.34 Aligned_cols=55 Identities=25% Similarity=0.376 Sum_probs=30.5
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhH----HHHHHHHHhhCCCCEEEEEeCCceeee
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 393 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q----~~li~~l~~~~~~pvVvV~~~g~P~~l 393 (431)
+..+++|+||++.|... ++|.+|.++ -..- .++++.+.+.+. +.++++. +||+++
T Consensus 65 ~~~~~aDivii~ag~~r---kpG~~R~dl--l~~N~~I~~~i~~~i~~~~p-~a~vlvv-tNPvd~ 123 (312)
T 3hhp_A 65 PALEGADVVLISAGVAR---KPGMDRSDL--FNVNAGIVKNLVQQVAKTCP-KACIGII-TNPVNT 123 (312)
T ss_dssp HHHTTCSEEEECCSCSC---CTTCCHHHH--HHHHHHHHHHHHHHHHHHCT-TSEEEEC-SSCHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHHHCC-CcEEEEe-cCcchh
Confidence 45789999998877532 344444322 1111 234455555443 4454445 599876
No 45
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=26.24 E-value=13 Score=35.10 Aligned_cols=57 Identities=21% Similarity=0.381 Sum_probs=31.5
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCC--hhHHHHHHHHHhhCCCCEEEEEeCCceeee
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLP--GRQQELVSRVAKASRGPVVLVLMCGGPVDV 393 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~--~~q~~li~~l~~~~~~pvVvV~~~g~P~~l 393 (431)
+..+++|+||++.|... .+|.+|.++-.. +--+++++.+.+.+ ...++++. +||.++
T Consensus 74 ~a~~~aDvVIiaag~p~---kpg~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vlvv-sNPvd~ 132 (315)
T 3tl2_A 74 ADTADSDVVVITAGIAR---KPGMSRDDLVATNSKIMKSITRDIAKHS-PNAIIVVL-TNPVDA 132 (315)
T ss_dssp GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEC-CChHHH
Confidence 35789999999887542 344444322100 01134455666544 34555545 599887
No 46
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=26.15 E-value=13 Score=35.21 Aligned_cols=56 Identities=16% Similarity=0.335 Sum_probs=28.5
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCChh----HHHHHHHHHhhCCCCEEEEEeCCceeeec
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGR----QQELVSRVAKASRGPVVLVLMCGGPVDVS 394 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~----q~~li~~l~~~~~~pvVvV~~~g~P~~l~ 394 (431)
+..+++|+||++.|... .+|.+|.++ -.. -.++.+.+.+.+ .+.++++. +||+++.
T Consensus 65 ~a~~~aDvVii~ag~~~---kpG~~R~dl--~~~N~~i~~~i~~~i~~~~-p~a~vivv-tNPvd~~ 124 (314)
T 3nep_X 65 GPTEDSDVCIITAGLPR---SPGMSRDDL--LAKNTEIVGGVTEQFVEGS-PDSTIIVV-ANPLDVM 124 (314)
T ss_dssp GGGTTCSEEEECCCC----------CHHH--HHHHHHHHHHHHHHHHTTC-TTCEEEEC-CSSHHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHH--HHhhHHHHHHHHHHHHHhC-CCcEEEec-CCchhHH
Confidence 35788999999877532 344444322 111 134445565543 34555545 5998873
No 47
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=25.71 E-value=14 Score=35.19 Aligned_cols=57 Identities=21% Similarity=0.240 Sum_probs=30.9
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCC-C-hhHHHHHHHHHhhCCCCEEEEEeCCceeee
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLL-P-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 393 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l-~-~~q~~li~~l~~~~~~pvVvV~~~g~P~~l 393 (431)
+..+++|+||++.|... ++|.+|.++-. . .--.++++.+.+.+ ...++++. +||+++
T Consensus 69 ~a~~~aDvVvi~ag~p~---kpG~~R~dL~~~N~~Iv~~i~~~I~~~~-p~a~vlvv-tNPvd~ 127 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQ---KPGETRLELVEKNLKIFKGIVSEVMASG-FDGIFLVA-TNPVDI 127 (326)
T ss_dssp GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEEC-SSSHHH
T ss_pred HHhCCCCEEEEecccCC---CCCccHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEc-CChHHH
Confidence 35788999999887532 33444332210 0 01134455666544 34555545 599887
No 48
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=25.33 E-value=71 Score=27.24 Aligned_cols=55 Identities=13% Similarity=0.144 Sum_probs=34.6
Q ss_pred ccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh--hCCCCEEEEEeCCce
Q 014083 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK--ASRGPVVLVLMCGGP 390 (431)
Q Consensus 325 ~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~--~~~~pvVvV~~~g~P 390 (431)
.++....+...++|.+|++.-.+ +..+|+.=+.+++.+.. -.+||++++...|.+
T Consensus 58 ~~~~~~~~~i~~aD~ii~~sP~y-----------~~~~p~~lK~~ld~l~~~~~~gK~~~~~~tgg~~ 114 (197)
T 2vzf_A 58 AKLKEAVDATCNADGLIVATPIY-----------KASYTGLLKAFLDILPQFALAGKAALPLATGGSP 114 (197)
T ss_dssp HHHHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHTTSCTTTTTTCEEEEEEEESSG
T ss_pred HHHHHHHHHHHHCCEEEEEeCcc-----------CCCCCHHHHHHHHhccccccCCCEEEEEEECCCc
Confidence 34566667888999998865322 23456666777776531 236787777665543
No 49
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=24.58 E-value=32 Score=32.29 Aligned_cols=56 Identities=16% Similarity=0.290 Sum_probs=30.7
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhH----HHHHHHHHhhCCCCEEEEEeCCceeeec
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDVS 394 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q----~~li~~l~~~~~~pvVvV~~~g~P~~l~ 394 (431)
++.+++|+||++.|... .+|.+|.++ -... .++++.+.+.+. ..++++. .||+++.
T Consensus 64 ~a~~~aDvVvi~ag~~~---~~g~~r~dl--~~~n~~i~~~i~~~i~~~~p-~a~viv~-sNPv~~~ 123 (314)
T 1mld_A 64 DCLKGCDVVVIPAGVPR---KPGMTRDDL--FNTNATIVATLTAACAQHCP-DAMICII-SNPVNST 123 (314)
T ss_dssp HHHTTCSEEEECCSCCC---CTTCCGGGG--HHHHHHHHHHHHHHHHHHCT-TSEEEEC-SSCHHHH
T ss_pred HHhCCCCEEEECCCcCC---CCCCcHHHH--HHHHHHHHHHHHHHHHhhCC-CeEEEEE-CCCcchh
Confidence 45789999999887542 334444332 1122 234445554443 3344445 5999864
No 50
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=24.25 E-value=20 Score=34.05 Aligned_cols=56 Identities=18% Similarity=0.315 Sum_probs=29.5
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhH----HHHHHHHHhhCCCCEEEEEeCCceeeec
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDVS 394 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q----~~li~~l~~~~~~pvVvV~~~g~P~~l~ 394 (431)
++.+++|+||++.|... .+|.+|.++ -... .++++.+.+.+ ...++++. +||+++.
T Consensus 71 ~a~~~aDiVIiaag~p~---k~G~~R~dl--~~~N~~i~~~i~~~i~~~~-p~a~iivv-tNPvd~~ 130 (324)
T 3gvi_A 71 AAIEGADVVIVTAGVPR---KPGMSRDDL--LGINLKVMEQVGAGIKKYA-PEAFVICI-TNPLDAM 130 (324)
T ss_dssp GGGTTCSEEEECCSCCC---C-----CHH--HHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHH
T ss_pred HHHCCCCEEEEccCcCC---CCCCCHHHH--HHhhHHHHHHHHHHHHHHC-CCeEEEec-CCCcHHH
Confidence 45789999999887532 344444332 1112 34445555544 34555555 4998873
No 51
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=23.90 E-value=1.3e+02 Score=29.41 Aligned_cols=45 Identities=22% Similarity=0.327 Sum_probs=30.0
Q ss_pred HHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeC
Q 014083 330 AEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMC 387 (431)
Q Consensus 330 ~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV~~~ 387 (431)
+...+..+|++|+++... -.+.....++.+.+.+ .++|+|+|++-
T Consensus 96 ~~~~~~~ad~il~VvD~~------------~~~~~~d~~l~~~l~~-~~~pvilV~NK 140 (456)
T 4dcu_A 96 AEIAMDEADVIIFMVNGR------------EGVTAADEEVAKILYR-TKKPVVLAVNK 140 (456)
T ss_dssp HHHHHHHCSEEEEEEESS------------SCSCHHHHHHHHHHTT-CCSCEEEEEEC
T ss_pred HHhhHhhCCEEEEEEeCC------------CCCChHHHHHHHHHHH-cCCCEEEEEEC
Confidence 345667899999987521 1244555666666654 67899988773
No 52
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=23.82 E-value=2.1e+02 Score=24.55 Aligned_cols=38 Identities=16% Similarity=-0.025 Sum_probs=27.4
Q ss_pred ccHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHH
Q 014083 325 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRV 373 (431)
Q Consensus 325 ~~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l 373 (431)
.++.+..+....||.+|++.=. + ++.+|..=+.+|+.+
T Consensus 59 ~d~~~~~~~l~~AD~iV~~~P~---y--------~~s~pa~LK~~iDrv 96 (204)
T 2amj_A 59 YDVKAEVQNFLWADVVIWQMPG---W--------WMGAPWTVKKYIDDV 96 (204)
T ss_dssp CCHHHHHHHHHHCSEEEEEEEC---B--------TTBCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCCEEEEECCc---c--------ccCCCHHHHHHHHHH
Confidence 4577778899999999986522 1 456777777888875
No 53
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=23.74 E-value=1.3e+02 Score=25.80 Aligned_cols=53 Identities=11% Similarity=0.171 Sum_probs=36.1
Q ss_pred HHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHh-------------------hCCCCEEEEEeC
Q 014083 327 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-------------------ASRGPVVLVLMC 387 (431)
Q Consensus 327 ~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~-------------------~~~~pvVvV~~~ 387 (431)
..+..+....+|.+|+..=. + +..+|..=+.+|+.+.. ..+|+++++..+
T Consensus 78 ~~~~~~~l~~AD~iV~~~P~---y--------~~~~pa~lK~~iD~~~~~g~~f~~~~~~g~~~~~~~l~gK~~~~i~t~ 146 (212)
T 3r6w_A 78 SDQLVGELFDSDLLVISTPM---Y--------NFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSR 146 (212)
T ss_dssp HHHHHHHHHHCSEEEEEEEC---B--------TTBCCHHHHHHHHHHCCBTTTEEEEECC-CEEEEECCCSCEEEEEEEC
T ss_pred HHHHHHHHHhCCEEEEEcCc---c--------cccCCHHHHHHHHHHhhCCceeecccCCCCccccccCCCCEEEEEEec
Confidence 45566788999999886422 1 45678777888888831 135778877777
Q ss_pred Cce
Q 014083 388 GGP 390 (431)
Q Consensus 388 g~P 390 (431)
|.|
T Consensus 147 g~~ 149 (212)
T 3r6w_A 147 GGH 149 (212)
T ss_dssp SSS
T ss_pred CCC
Confidence 744
No 54
>3qq5_A Small GTP-binding protein; hydrogenase, H-cluster, HYDA maturation, GTP-binding domain, maturation enzyme, oxidoreductase; 2.99A {Thermotoga neapolitana}
Probab=23.47 E-value=1.8e+02 Score=28.43 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=32.3
Q ss_pred cHHHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeC
Q 014083 326 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMC 387 (431)
Q Consensus 326 ~~~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV~~~ 387 (431)
..+.....+..+|.+|+++.. .......++++.+.+ .++|+|+|+|-
T Consensus 103 ~~~~~~~~l~~aD~vllVvD~--------------~~~~~~~~~l~~l~~-~~~piIvV~NK 149 (423)
T 3qq5_A 103 RVEKARRVFYRADCGILVTDS--------------APTPYEDDVVNLFKE-MEIPFVVVVNK 149 (423)
T ss_dssp CHHHHHHHHTSCSEEEEECSS--------------SCCHHHHHHHHHHHH-TTCCEEEECCC
T ss_pred HHHHHHHHHhcCCEEEEEEeC--------------CChHHHHHHHHHHHh-cCCCEEEEEeC
Confidence 455566778889999998732 234455677777775 47898888653
No 55
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=22.74 E-value=29 Score=32.73 Aligned_cols=56 Identities=21% Similarity=0.292 Sum_probs=26.9
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHH----HHHHHHHhhCCCCEEEEEeCCceeeec
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQ----ELVSRVAKASRGPVVLVLMCGGPVDVS 394 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~----~li~~l~~~~~~pvVvV~~~g~P~~l~ 394 (431)
++.+++|+||++.|... .+|.+|.++ -.... ++++.+.+.+ ...++++. .||+++.
T Consensus 68 ~a~~~aDvVii~ag~~~---~~g~~R~dl--~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~~~ 127 (318)
T 1ez4_A 68 SDCKDADLVVITAGAPQ---KPGESRLDL--VNKNLNILSSIVKPVVDSG-FDGIFLVA-ANPVDIL 127 (318)
T ss_dssp GGGTTCSEEEECCCC-------------C--HHHHHHHHHHHHHHHHHTT-CCSEEEEC-SSSHHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHHhC-CCeEEEEe-CCcHHHH
Confidence 34789999999887532 345555443 22222 3344454433 34444445 5999873
No 56
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=22.56 E-value=1.5e+02 Score=28.83 Aligned_cols=45 Identities=22% Similarity=0.336 Sum_probs=28.1
Q ss_pred HHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeC
Q 014083 330 AEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMC 387 (431)
Q Consensus 330 ~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV~~~ 387 (431)
+...++.+|++|+++.... .+.....++.+.+. ..++|+|+|++-
T Consensus 76 ~~~~~~~ad~il~vvD~~~------------~~~~~d~~~~~~l~-~~~~pvilv~NK 120 (436)
T 2hjg_A 76 AEIAMDEADVIIFMVNGRE------------GVTAADEEVAKILY-RTKKPVVLAVNK 120 (436)
T ss_dssp HHHHHHHCSEEEEEEETTT------------CSCHHHHHHHHHHT-TCCSCEEEEEEC
T ss_pred HHHHHHhCCEEEEEEeCCC------------CCCHHHHHHHHHHH-HcCCCEEEEEEC
Confidence 3456788999998885321 12344445555554 367899988774
No 57
>1d2d_A TRNA synthetase, tRNA ligase; tRNA synthetase (ligase), protein transcription; NMR {Cricetulus griseus} SCOP: a.16.1.3 PDB: 1r1b_A
Probab=22.46 E-value=1.9e+02 Score=19.78 Aligned_cols=37 Identities=8% Similarity=0.076 Sum_probs=28.7
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 014083 188 TEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPS 224 (431)
Q Consensus 188 l~~av~~g~~~~~~l~~av~ril~~k~~~gl~~~~p~ 224 (431)
....++....+.+.|+.+|..++.+|..+-...+.++
T Consensus 12 ~VR~LKa~kA~k~~i~~aV~~Ll~LK~~~~~~tg~~~ 48 (59)
T 1d2d_A 12 VVRKLKAEKAPKAKVTEAVECLLSLKAEYKEKTGKEY 48 (59)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHHHHCSSSSSSC
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3444566678899999999999999999876654444
No 58
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=22.31 E-value=18 Score=33.86 Aligned_cols=55 Identities=20% Similarity=0.300 Sum_probs=27.5
Q ss_pred HhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHH----HHHHHHHhhCCCCEEEEEeCCceeeec
Q 014083 333 AARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQ----ELVSRVAKASRGPVVLVLMCGGPVDVS 394 (431)
Q Consensus 333 ~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~----~li~~l~~~~~~pvVvV~~~g~P~~l~ 394 (431)
..+++|+||+++|... .+|.+|.++ -.... ++.+.+.+.+ .+.++++. .||+++.
T Consensus 67 a~~~aD~Vi~a~g~p~---~~g~~r~dl--~~~n~~i~~~i~~~i~~~~-p~a~vi~~-tNPv~~~ 125 (309)
T 1ur5_A 67 DTANSDVIVVTSGAPR---KPGMSREDL--IKVNADITRACISQAAPLS-PNAVIIMV-NNPLDAM 125 (309)
T ss_dssp GGTTCSEEEECCCC-----------CHH--HHHHHHHHHHHHHHHGGGC-TTCEEEEC-CSSHHHH
T ss_pred HHCCCCEEEEcCCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHhhC-CCeEEEEc-CCchHHH
Confidence 4788999999987542 334444332 12222 3444454433 35555545 5998873
No 59
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=22.19 E-value=1.4e+02 Score=25.75 Aligned_cols=48 Identities=8% Similarity=0.022 Sum_probs=30.1
Q ss_pred HHHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeC
Q 014083 328 GAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMC 387 (431)
Q Consensus 328 ~~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV~~~ 387 (431)
....+..+.++.+|+++|.+... ...+..=|+......++|+|+|-..
T Consensus 71 rrLReRI~~Sk~vIllIs~~T~~------------s~~v~wEIe~Ai~~~~~PII~Vy~~ 118 (189)
T 3hyn_A 71 PRLHTRLDNSKNIILFLSSITAN------------SRALREEMNYGIGTKGLPVIVIYPD 118 (189)
T ss_dssp HHHHHHHHTEEEEEEECCTTCCC------------CHHHHHHHHHHTTTTCCCEEEEETT
T ss_pred HHHHHHHHhcCcEEEEEecCccc------------cchhHHHHHHHHHhcCCcEEEEECC
Confidence 34567888999999999865321 2344444444332368898887543
No 60
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=22.15 E-value=37 Score=32.03 Aligned_cols=58 Identities=22% Similarity=0.328 Sum_probs=31.1
Q ss_pred HHHhhcCCEEEEEeeCCCCcccccCCCCCCCCC--hhHHHHHHHHHhhCCCCEEEEEeCCceeee
Q 014083 331 EVAARQADATVLVMGLDQSIEAEFIDRAGLLLP--GRQQELVSRVAKASRGPVVLVLMCGGPVDV 393 (431)
Q Consensus 331 ~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~--~~q~~li~~l~~~~~~pvVvV~~~g~P~~l 393 (431)
.++.+++|+||++.|... .+|.+|.++..- +.-.++++.+.+... +.+|++. .||+++
T Consensus 71 ~~al~gaDvVi~~ag~~~---~~g~~r~dl~~~N~~~~~~i~~~i~~~~p-~~~viv~-SNPv~~ 130 (326)
T 1smk_A 71 EAALTGMDLIIVPAGVPR---KPGMTRDDLFKINAGIVKTLCEGIAKCCP-RAIVNLI-SNPVNS 130 (326)
T ss_dssp HHHHTTCSEEEECCCCCC---CSSCCCSHHHHHHHHHHHHHHHHHHHHCT-TSEEEEC-CSSHHH
T ss_pred HHHcCCCCEEEEcCCcCC---CCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEE-CCchHH
Confidence 356789999999887532 233333222100 112345555555443 3444444 599988
No 61
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=21.98 E-value=1.5e+02 Score=25.13 Aligned_cols=41 Identities=17% Similarity=0.215 Sum_probs=26.4
Q ss_pred hhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeC
Q 014083 334 ARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMC 387 (431)
Q Consensus 334 a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV~~~ 387 (431)
...+|.+|+++.... .+...+.++++.+.. .++|+|+|++-
T Consensus 113 ~~~~d~vi~v~d~~~------------~~~~~~~~~~~~l~~-~~~p~i~v~nK 153 (223)
T 4dhe_A 113 RPQLCGMILMMDARR------------PLTELDRRMIEWFAP-TGKPIHSLLTK 153 (223)
T ss_dssp CTTEEEEEEEEETTS------------CCCHHHHHHHHHHGG-GCCCEEEEEEC
T ss_pred CcCcCEEEEEEeCCC------------CCCHHHHHHHHHHHh-cCCCEEEEEec
Confidence 344778888875321 234556677777765 56798888763
No 62
>2l1n_A Uncharacterized protein; DUF1823, hypothetical protein, cyanobacteria, structural GEN PSI-biology, protein structure initiative; NMR {Synechococcus elongatus}
Probab=21.89 E-value=20 Score=28.44 Aligned_cols=15 Identities=20% Similarity=0.503 Sum_probs=12.6
Q ss_pred HHHhhhhcCCCcEEE
Q 014083 131 KNTIHGQWRLDGYIV 145 (431)
Q Consensus 131 ~~~LR~~~gf~G~v~ 145 (431)
+++|+++|||+|+-|
T Consensus 80 KQlLKe~LgFkGYki 94 (120)
T 2l1n_A 80 KQLLKEELGFAGYSI 94 (120)
T ss_dssp TTHHHHTTCCCCCCG
T ss_pred HHHHHHhcCCCceee
Confidence 478899999999954
No 63
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=21.88 E-value=1.7e+02 Score=28.46 Aligned_cols=46 Identities=20% Similarity=0.159 Sum_probs=28.6
Q ss_pred HHHHHhhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhhCCCCEEEEEeC
Q 014083 329 AAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMC 387 (431)
Q Consensus 329 ~~~~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~~~~pvVvV~~~ 387 (431)
.+...++++|++|+++.... .+.....++.+.+.+ .++|+|+|++-
T Consensus 74 ~~~~~~~~ad~il~V~D~~~------------~~~~~d~~i~~~l~~-~~~p~ilv~NK 119 (439)
T 1mky_A 74 VTLNMIREADLVLFVVDGKR------------GITKEDESLADFLRK-STVDTILVANK 119 (439)
T ss_dssp HHHHHHTTCSEEEEEEETTT------------CCCHHHHHHHHHHHH-HTCCEEEEEES
T ss_pred HHHHHHHhCCEEEEEEECCC------------CCCHHHHHHHHHHHH-cCCCEEEEEeC
Confidence 34556789999999885321 133344445554543 46899888774
No 64
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=21.38 E-value=1.1e+02 Score=31.50 Aligned_cols=73 Identities=16% Similarity=0.100 Sum_probs=46.0
Q ss_pred hhhhcCCCcEEECCchhhhhhhccccccCChHHHHHHHHHcCCCccCchhhHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Q 014083 134 IHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTEGAVRGGLLREEDVNLALAYTITVQ 213 (431)
Q Consensus 134 LR~~~gf~G~v~sD~~~~~~~~~~~~~~~~~~~~~~~al~AG~D~~~~~~~~~~l~~av~~g~~~~~~l~~av~ril~~k 213 (431)
|++=+||+|-|+||.+..+.... .....++++...---.-|.|+.|.-... -....+.+++.+|+.|-+++-
T Consensus 82 lh~F~~w~~~iltDSGgfQv~s~-g~~~ltpe~~~~iq~~lg~DI~m~lD~~-------~~~~~~~~~~~~s~~rT~rw~ 153 (582)
T 1iq8_A 82 IHRMLDYNGIIEVDSGSFQLMKY-GSIEVSNREIIEFQHRIGVDIGTFLDIP-------TPPDAPREQAVKELEITLSRA 153 (582)
T ss_dssp HHHHHTCCSEEEEECSTTHHHHS-SCCSSCHHHHHHHHHHTTCSBBCCCCCC-------CCTTCCHHHHHHHHHHHHHHH
T ss_pred hheeccCCCCceecccccccccc-cccccCHHHHHHHHHhhCCCEEEecCcC-------CCCCCCHHHHHHHHHHHHHHH
Confidence 67777999999999998775543 2234577776555556799998742100 011345666666666666554
Q ss_pred H
Q 014083 214 M 214 (431)
Q Consensus 214 ~ 214 (431)
.
T Consensus 154 ~ 154 (582)
T 1iq8_A 154 R 154 (582)
T ss_dssp H
T ss_pred H
Confidence 4
No 65
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=20.58 E-value=17 Score=34.83 Aligned_cols=55 Identities=18% Similarity=0.172 Sum_probs=27.0
Q ss_pred HHhhcCCEEEEEeeCCCCcccccCCCCCCCCChh----HHHHHHHHHhhCCCCEE-EEEeCCceeee
Q 014083 332 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGR----QQELVSRVAKASRGPVV-LVLMCGGPVDV 393 (431)
Q Consensus 332 ~~a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~----q~~li~~l~~~~~~pvV-vV~~~g~P~~l 393 (431)
+..+++|+||++.|... ++|.+|.++ -.. -+++++.+.+.+. +.+ +++. +||+++
T Consensus 72 ~al~dADvVvitaG~p~---kpG~~R~dL--l~~N~~I~~~i~~~i~~~~p-~a~~vlvv-sNPvd~ 131 (343)
T 3fi9_A 72 EALTDAKYIVSSGGAPR---KEGMTREDL--LKGNAEIAAQLGKDIKSYCP-DCKHVIII-FNPADI 131 (343)
T ss_dssp HHHTTEEEEEECCC----------CHHHH--HHHHHHHHHHHHHHHHHHCT-TCCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEEccCCCC---CCCCCHHHH--HHHHHHHHHHHHHHHHHhcc-CcEEEEEe-cCchHH
Confidence 45788999999877532 344444322 111 1244555665443 343 4444 599876
No 66
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=20.48 E-value=1.4e+02 Score=24.80 Aligned_cols=45 Identities=16% Similarity=0.192 Sum_probs=25.3
Q ss_pred hcCCEEEEEeeCCCCcccccCCCCCCCCChhH-----HHHHHHHHhhCCCCEEEEEeCCcee
Q 014083 335 RQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ-----QELVSRVAKASRGPVVLVLMCGGPV 391 (431)
Q Consensus 335 ~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q-----~~li~~l~~~~~~pvVvV~~~g~P~ 391 (431)
...|+||+.+|.+. +..+.++ .++|+.+.+......| ++.+..|+
T Consensus 73 ~~pd~Vvi~~G~ND-----------~~~~~~~~~~~l~~ii~~l~~~~p~~~i-i~~~~~P~ 122 (200)
T 4h08_A 73 TKFDVIHFNNGLHG-----------FDYTEEEYDKSFPKLIKIIRKYAPKAKL-IWANTTPV 122 (200)
T ss_dssp SCCSEEEECCCSSC-----------TTSCHHHHHHHHHHHHHHHHHHCTTCEE-EEECCCCC
T ss_pred CCCCeEEEEeeeCC-----------CCCCHHHHHHHHHHHHHHHhhhCCCccE-EEeccCCC
Confidence 46799999888763 2334433 4567777654433333 33433454
No 67
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=20.34 E-value=1.5e+02 Score=23.85 Aligned_cols=70 Identities=13% Similarity=0.118 Sum_probs=39.3
Q ss_pred hhcCCEEEEEeeCCCCcccccCCCCCCCCChhHHHHHHHHHhh-CCCCEEEEEeCCceeeecCcCCCCCccEEEEccCcc
Q 014083 334 ARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKA-SRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYPG 412 (431)
Q Consensus 334 a~~aD~vIv~~g~~~~~~~eg~dr~~l~l~~~q~~li~~l~~~-~~~pvVvV~~~g~P~~l~~~~~~~~v~ail~~~~~g 412 (431)
...+|++|++++. +.....+..+++. .+...|++.. .+|-....+.. -.++ ++ .|.
T Consensus 82 ~~~ad~Vi~~~~~-----------------~~~~~~~~~~~~~~~~~~~iv~~~-~~~~~~~~l~~-~G~~-vi---~p~ 138 (155)
T 2g1u_A 82 MEKADMVFAFTND-----------------DSTNFFISMNARYMFNVENVIARV-YDPEKIKIFEE-NGIK-TI---CPA 138 (155)
T ss_dssp GGGCSEEEECSSC-----------------HHHHHHHHHHHHHTSCCSEEEEEC-SSGGGHHHHHT-TTCE-EE---CHH
T ss_pred cccCCEEEEEeCC-----------------cHHHHHHHHHHHHHCCCCeEEEEE-CCHHHHHHHHH-CCCc-EE---cHH
Confidence 5678998887642 1223333334433 4444454444 35554444432 2455 43 688
Q ss_pred hhhHHHHHHHhhcC
Q 014083 413 QAGGAAIADVLFGR 426 (431)
Q Consensus 413 ~~~g~A~advL~G~ 426 (431)
+..+..+++.|.+.
T Consensus 139 ~~~a~~l~~~l~~~ 152 (155)
T 2g1u_A 139 VLMIEKVKEFIIGS 152 (155)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcc
Confidence 88889999988764
No 68
>1gng_X Frattide, glycogen synthase kinase-3 beta; transferase, protein kinase, GSK3/frattide complex, phosphorylated, active; HET: PTR; 2.6A {Homo sapiens}
Probab=20.17 E-value=62 Score=20.04 Aligned_cols=20 Identities=20% Similarity=0.081 Sum_probs=15.5
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHHH
Q 014083 186 IHTEGAVRGGLLREEDVNLALAYT 209 (431)
Q Consensus 186 ~~l~~av~~g~~~~~~l~~av~ri 209 (431)
..+.+.+.+|.+ |.+||+|+
T Consensus 14 ~lLQ~Llr~G~L----IkEAVrRl 33 (39)
T 1gng_X 14 RLLQQLVLSGNL----IKEAVRRL 33 (39)
T ss_dssp HHHHHHHHHTCH----HHHHHHHH
T ss_pred HHHHHHHHhCcH----HHHHHHHH
Confidence 466788888876 78888886
Done!