Your job contains 1 sequence.
>014085
MPRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK
LIGVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIKEALLDPYLSRYS
AIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGINT
LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA
TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE
QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI
SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI
IGFDFMEKPSR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014085
(431 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 1579 3.5e-162 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 718 8.2e-106 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 706 8.5e-104 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 692 2.9e-103 2
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 697 3.6e-103 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 697 4.6e-103 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 697 4.9e-103 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 697 5.7e-103 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 697 5.8e-103 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 697 7.4e-103 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 697 7.5e-103 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 697 7.8e-103 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 697 8.6e-103 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 697 1.1e-102 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 707 1.6e-102 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 707 1.6e-102 2
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 689 1.1e-101 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 703 1.6e-101 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 694 1.4e-100 2
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 680 1.6e-100 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 693 4.5e-100 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 692 4.5e-100 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 663 8.6e-100 2
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 670 1.1e-99 2
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 672 1.3e-99 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 691 3.0e-99 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 665 3.7e-99 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 668 4.2e-99 2
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 672 7.6e-99 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 655 1.1e-98 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 655 1.1e-98 2
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 662 2.2e-98 2
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 674 5.5e-98 2
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 666 4.7e-97 2
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 649 7.1e-97 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 665 2.7e-96 2
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 665 2.7e-96 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 661 3.9e-96 2
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 656 5.0e-96 2
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 684 6.9e-96 2
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 639 1.8e-95 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 657 2.1e-95 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 657 2.1e-95 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 657 2.6e-95 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 656 3.4e-95 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 657 4.1e-95 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 655 6.9e-95 2
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 602 2.6e-94 2
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 629 2.2e-93 2
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 639 2.4e-93 2
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 619 1.0e-92 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 610 1.3e-92 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 637 2.1e-92 2
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 604 2.1e-92 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 598 8.9e-92 2
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 597 8.9e-92 2
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 597 8.9e-92 2
ASPGD|ASPL0000001852 - symbol:AN6085 species:162425 "Emer... 575 1.0e-91 4
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 600 1.5e-91 2
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 600 1.5e-91 2
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 630 2.4e-91 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 638 3.8e-91 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 610 1.0e-90 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 610 1.0e-90 2
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 610 1.8e-90 2
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 587 3.4e-90 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 609 4.8e-90 2
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 589 5.6e-90 2
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 589 5.6e-90 2
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 609 6.1e-90 2
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 607 7.2e-90 2
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 607 8.0e-90 2
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 570 1.2e-89 2
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 636 2.4e-89 2
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 597 8.5e-89 2
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 585 1.0e-88 2
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 599 1.0e-88 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 610 1.3e-88 2
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 605 3.5e-88 2
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 604 1.0e-86 2
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 609 1.3e-86 2
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 601 1.3e-86 2
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 605 2.1e-86 2
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 605 2.1e-86 2
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 605 2.1e-86 2
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 605 2.1e-86 2
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 605 2.1e-86 2
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 605 2.1e-86 2
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 607 5.0e-85 2
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 607 5.0e-85 2
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 349 1.0e-83 3
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 349 1.0e-83 3
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 533 1.2e-83 2
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 550 2.5e-83 2
FB|FBgn0032194 - symbol:CG4901 species:7227 "Drosophila m... 526 2.5e-83 2
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 546 3.6e-82 2
UNIPROTKB|I3L1L6 - symbol:DHX33 "Putative ATP-dependent R... 670 7.4e-82 2
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 600 1.5e-81 2
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 521 7.4e-81 2
CGD|CAL0002969 - symbol:orf19.107 species:5476 "Candida a... 522 6.9e-80 2
WARNING: Descriptions of 209 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 1579 (560.9 bits), Expect = 3.5e-162, P = 3.5e-162
Identities = 321/443 (72%), Positives = 361/443 (81%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
RQKI + R+SLPIASVEKRLVEEV+KNDILIIVGETGSGKTTQLPQFL++AGFCR+GK+I
Sbjct: 31 RQKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMI 90
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G+TQP EE V+LGQ+VGYSIRFDD TS STR+K EALLD
Sbjct: 91 GITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLD 150
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS-----KSADGHSXXXXXXXXSDMI 168
P+LSRYS IIVDEAH+R+VHTDVLL LLKK+Q RS K+ G+ D
Sbjct: 151 PHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDA- 209
Query: 169 LDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEIL 228
G NG+ LK QGRK +PLKLIIMSASLDAR FSEYFG AKAVHVQGRQFPV+IL
Sbjct: 210 --NGPQQNGV--LKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDIL 265
Query: 229 YTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKL 288
YT++PE DY+DATL+TIFQ+H +E PGDILVFLTGQ+EIESVERLVQERL +PE RKL
Sbjct: 266 YTVHPESDYVDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKL 325
Query: 289 VTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDP 348
+ + IFS+LPSEQQM+VFAPA GFRKVILATNIAETS+TIPGI+YVIDPGFVKAR YDP
Sbjct: 326 LPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDP 385
Query: 349 VKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNV 408
KGMESL VVP SKAQ LQRSGRAGREGPGK FRLYPE EF+KLEDSTKPEIKRCNLSN+
Sbjct: 386 SKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNI 445
Query: 409 ILQLKALGVDDIIGFDFMEKPSR 431
ILQLKALG+DDI+GFDF++KPSR
Sbjct: 446 ILQLKALGIDDIVGFDFIDKPSR 468
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 718 (257.8 bits), Expect = 8.2e-106, Sum P(2) = 8.2e-106
Identities = 145/263 (55%), Positives = 197/263 (74%)
Query: 181 LKQCQGR--KFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYL 238
LK Q R K PLK+IIMSA+LDA FS+YF A ++++GRQFPV+I YT + DY+
Sbjct: 209 LKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGRQFPVQIYYTEEIQKDYV 268
Query: 239 DATLITIFQVHL------------DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 286
DA LIT+ Q+H+ +E GDILVFLTG++EIE++E+L+ +R+ +LP S+
Sbjct: 269 DAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLTGRDEIENLEKLLLDRIPRLPVGSK 328
Query: 287 KLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLY 346
L+ PIFS+LP EQQM+VF A G RKVILATNIAETS+TI GI+YV+D G VK++++
Sbjct: 329 DLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNIAETSLTINGIRYVVDSGAVKSKIF 388
Query: 347 DPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLS 406
+P G++SL ++PISKA A QR+GRAGRE GKC+RLY + F+KL+ S+ PEIKR N++
Sbjct: 389 NPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRLYTQETFEKLDTSSIPEIKRSNIA 448
Query: 407 NVILQLKALGVDDIIGFDFMEKP 429
NVILQLK +G++DI+ FDF+E P
Sbjct: 449 NVILQLKTIGINDILSFDFLESP 471
Score = 349 (127.9 bits), Expect = 8.2e-106, Sum P(2) = 8.2e-106
Identities = 70/159 (44%), Positives = 106/159 (66%)
Query: 1 MPRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
+P++ I Q++SLP+ + + L++ +++ +II+ ETG+GKTTQ+PQ+L+ G+ +D
Sbjct: 62 IPKE-IKLQKESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGY-KDNG 119
Query: 61 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EAL 111
+I +TQP +E GVELG +VGY +RFDD+T+ T++K EA+
Sbjct: 120 IIAITQPRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAM 179
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
LD LS+YS II+DEAHERT++TDVL GLLK +Q R K
Sbjct: 180 LDSSLSKYSVIILDEAHERTLNTDVLFGLLKSIQKRREK 218
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 706 (253.6 bits), Expect = 8.5e-104, Sum P(2) = 8.5e-104
Identities = 138/239 (57%), Positives = 180/239 (75%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKLI+ SA+LDA FS YF + GR +PVEI+YT PE DYLDA L+T+ Q+HL
Sbjct: 657 LKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLS 716
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 311
E PGDILVFLTGQEEI++ ++ ER L ++ +LV +P++S+LPSE Q R+F PA
Sbjct: 717 EGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPP 776
Query: 312 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 371
G RKV++ATNIAETS+TI GI YV+DPGFVK +DP GM+SL+V PIS+AQA QRSGR
Sbjct: 777 GGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGR 836
Query: 372 AGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
AGR GPGKC+RLY E+ + +++ S PEI+R NLS+ IL LKA+G++D++ FDFM+ P
Sbjct: 837 AGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPP 895
Score = 357 (130.7 bits), Expect = 8.5e-104, Sum P(2) = 8.5e-104
Identities = 73/144 (50%), Positives = 95/144 (65%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQP 67
+QR+ LP+ + K+ +E V KN IL+++GETGSGKTTQ+ Q+L G+ D K+IG TQP
Sbjct: 505 EQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQP 564
Query: 68 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSR 118
EE G +G+ VGY+IRF+D+TS T+IK E L+DP LS+
Sbjct: 565 RRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSK 624
Query: 119 YSAIIVDEAHERTVHTDVLLGLLK 142
YS II+DEAHERTV TDVL GLLK
Sbjct: 625 YSVIILDEAHERTVATDVLFGLLK 648
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 692 (248.7 bits), Expect = 2.9e-103, Sum P(2) = 2.9e-103
Identities = 138/250 (55%), Positives = 183/250 (73%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 240
LK+ R+ LK+I+ SA+LDA FS YF + GR FPVEILY+ PE DYLDA
Sbjct: 678 LKKATRRR-PDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILYSKDPESDYLDA 736
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 300
L T+ Q+H+DE PGDIL+FLTGQEEI++ ++ ER+ L + +L+ +P++S+LP+E
Sbjct: 737 ALTTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNE 796
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
Q R+F PA G RKV++ATNIAETS+TI I YV+DPGFVK YDP GM+SL+V PI
Sbjct: 797 MQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPI 856
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDD 419
S+AQA QR+GRAGR GPGKCFRLY E + ++ ++ PEI+R NLSN IL LKA+G++D
Sbjct: 857 SQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGIND 916
Query: 420 IIGFDFMEKP 429
++ FDFM+ P
Sbjct: 917 LLHFDFMDPP 926
Score = 368 (134.6 bits), Expect = 2.9e-103, Sum P(2) = 2.9e-103
Identities = 79/152 (51%), Positives = 101/152 (66%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+SLP+ + ++L++ V++N I+I+VGETGSGKTTQL Q+L AGF +G +IG T
Sbjct: 535 IKQQRESLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANEG-VIGCT 593
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G ELGQ VGY+IRF+D TS +TRIK E ++DP L
Sbjct: 594 QPRRVAAMSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDL 653
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
RYS I++DEAHERT+ TDVL LLKK R
Sbjct: 654 KRYSVIMLDEAHERTIATDVLFALLKKATRRR 685
Score = 46 (21.3 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 248 VHLDEA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSL 297
+H D P I LT EE+ ++ L E LL RK+ P+ SL
Sbjct: 918 LHFDFMDPPPINTMLTALEELYALSALDDEGLLT--RLGRKMADFPMEPSL 966
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 697 (250.4 bits), Expect = 3.6e-103, Sum P(2) = 3.6e-103
Identities = 134/244 (54%), Positives = 183/244 (75%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 706 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 765
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 766 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 825
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 826 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 885
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 886 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 945
Query: 426 MEKP 429
M+ P
Sbjct: 946 MDAP 949
Score = 361 (132.1 bits), Expect = 3.6e-103, Sum P(2) = 3.6e-103
Identities = 79/155 (50%), Positives = 101/155 (65%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 555 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 613
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 614 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 673
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 674 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 708
Score = 38 (18.4 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 47
+ SL + V++ E++ N +VGET + + P
Sbjct: 330 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 367
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 697 (250.4 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 134/244 (54%), Positives = 183/244 (75%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 675 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 734
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 735 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 794
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 795 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 854
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 855 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 914
Query: 426 MEKP 429
M+ P
Sbjct: 915 MDAP 918
Score = 361 (132.1 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 79/155 (50%), Positives = 101/155 (65%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 524 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 582
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 583 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 642
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 643 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 677
Score = 38 (18.4 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 47
+ SL + V++ E++ N +VGET + + P
Sbjct: 299 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 336
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 697 (250.4 bits), Expect = 4.9e-103, Sum P(2) = 4.9e-103
Identities = 134/244 (54%), Positives = 183/244 (75%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 706 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 765
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 766 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 825
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 826 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 885
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 886 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 945
Query: 426 MEKP 429
M+ P
Sbjct: 946 MDAP 949
Score = 361 (132.1 bits), Expect = 4.9e-103, Sum P(2) = 4.9e-103
Identities = 79/155 (50%), Positives = 101/155 (65%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 555 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 613
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 614 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 673
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 674 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 708
Score = 38 (18.4 bits), Expect = 5.7e-69, Sum P(2) = 5.7e-69
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 47
+ SL + V++ E++ N +VGET + + P
Sbjct: 330 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 367
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 697 (250.4 bits), Expect = 5.7e-103, Sum P(2) = 5.7e-103
Identities = 134/244 (54%), Positives = 183/244 (75%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 728 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 787
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 788 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 847
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 848 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 907
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 908 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 967
Query: 426 MEKP 429
M+ P
Sbjct: 968 MDAP 971
Score = 361 (132.1 bits), Expect = 5.7e-103, Sum P(2) = 5.7e-103
Identities = 79/155 (50%), Positives = 101/155 (65%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 577 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 635
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 636 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 695
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 696 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 730
Score = 38 (18.4 bits), Expect = 6.7e-69, Sum P(2) = 6.7e-69
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 47
+ SL + V++ E++ N +VGET + + P
Sbjct: 352 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 389
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 697 (250.4 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 134/244 (54%), Positives = 183/244 (75%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 730 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 789
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 790 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 849
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 850 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 909
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 910 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 969
Query: 426 MEKP 429
M+ P
Sbjct: 970 MDAP 973
Score = 361 (132.1 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 79/155 (50%), Positives = 101/155 (65%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 579 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 637
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 638 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 697
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 698 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 732
Score = 38 (18.4 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 47
+ SL + V++ E++ N +VGET + + P
Sbjct: 354 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 391
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 697 (250.4 bits), Expect = 7.4e-103, Sum P(2) = 7.4e-103
Identities = 133/244 (54%), Positives = 183/244 (75%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +KLI+ SA+LDA FS+YF A + GR +PVE+LYT PE DYLDA+LIT+
Sbjct: 696 QKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVM 755
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 756 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 815
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 816 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 875
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 876 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 935
Query: 426 MEKP 429
M+ P
Sbjct: 936 MDAP 939
Score = 359 (131.4 bits), Expect = 7.4e-103, Sum P(2) = 7.4e-103
Identities = 78/153 (50%), Positives = 100/153 (65%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
IL+QR+SLPI ++++L++ V N ILI++GETGSGKTTQ+ Q+L AG+ GK IG T
Sbjct: 548 ILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGK-IGCT 606
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G LGQ VGY+IRF+D TS T IK E L+DP L
Sbjct: 607 QPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 666
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
+Y+ I++DEAHERT+HTDVL GLLKK R+
Sbjct: 667 GQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRT 699
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 697 (250.4 bits), Expect = 7.5e-103, Sum P(2) = 7.5e-103
Identities = 134/244 (54%), Positives = 183/244 (75%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 698 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 757
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 758 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 817
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 818 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 877
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 878 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 937
Query: 426 MEKP 429
M+ P
Sbjct: 938 MDAP 941
Score = 359 (131.4 bits), Expect = 7.5e-103, Sum P(2) = 7.5e-103
Identities = 78/155 (50%), Positives = 101/155 (65%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ I++QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 547 QMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 605
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 606 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 665
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 666 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 700
Score = 38 (18.4 bits), Expect = 5.4e-69, Sum P(2) = 5.4e-69
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 47
+ SL + V++ E++ N +VGET + + P
Sbjct: 322 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 359
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 697 (250.4 bits), Expect = 7.8e-103, Sum P(2) = 7.8e-103
Identities = 134/244 (54%), Positives = 183/244 (75%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 702 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 761
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 762 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 821
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 822 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 881
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 882 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 941
Query: 426 MEKP 429
M+ P
Sbjct: 942 MDAP 945
Score = 359 (131.4 bits), Expect = 7.8e-103, Sum P(2) = 7.8e-103
Identities = 78/155 (50%), Positives = 101/155 (65%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ I++QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 551 QMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 609
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 610 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 669
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 670 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 704
Score = 38 (18.4 bits), Expect = 5.6e-69, Sum P(2) = 5.6e-69
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 47
+ SL + V++ E++ N +VGET + + P
Sbjct: 326 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 363
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 697 (250.4 bits), Expect = 8.6e-103, Sum P(2) = 8.6e-103
Identities = 134/244 (54%), Positives = 183/244 (75%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 716 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 775
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 776 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 835
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 836 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 895
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 896 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 955
Query: 426 MEKP 429
M+ P
Sbjct: 956 MDAP 959
Score = 359 (131.4 bits), Expect = 8.6e-103, Sum P(2) = 8.6e-103
Identities = 78/155 (50%), Positives = 101/155 (65%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ I++QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK I
Sbjct: 565 QMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-I 623
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LGQ VGY+IRF+D TS T IK E L+D
Sbjct: 624 GCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLID 683
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 684 PDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 718
Score = 38 (18.4 bits), Expect = 6.2e-69, Sum P(2) = 6.2e-69
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP 47
+ SL + V++ E++ N +VGET + + P
Sbjct: 340 KTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNP 377
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 697 (250.4 bits), Expect = 1.1e-102, Sum P(2) = 1.1e-102
Identities = 134/244 (54%), Positives = 183/244 (75%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 654 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 713
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 714 QIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 773
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+V PIS+AQA
Sbjct: 774 DPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAK 833
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+G++D++ FDF
Sbjct: 834 QRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDF 893
Query: 426 MEKP 429
M+ P
Sbjct: 894 MDAP 897
Score = 356 (130.4 bits), Expect = 1.1e-102, Sum P(2) = 1.1e-102
Identities = 77/152 (50%), Positives = 100/152 (65%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I++QR+SLPI ++++L++ V N ILI++GETGSGKTTQ+ Q+L AG+ GK IG T
Sbjct: 506 IIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCT 564
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G LGQ VGY+IRF+D TS T IK E L+DP L
Sbjct: 565 QPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 624
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 625 TQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 656
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 707 (253.9 bits), Expect = 1.6e-102, Sum P(2) = 1.6e-102
Identities = 142/261 (54%), Positives = 190/261 (72%)
Query: 170 DRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+R T+ + L + RK LKLII SA+LD+ FSEYF A + GR FPVEILY
Sbjct: 664 ERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILY 723
Query: 230 TLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLV 289
T PE DYL+A IT+ Q+HL E PGD+LVFLTGQEEI++ ++ ER+ + +L+
Sbjct: 724 TREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELI 783
Query: 290 TVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPV 349
+P++ +LPSE Q R+F PA AG RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+P
Sbjct: 784 ILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPK 843
Query: 350 KGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNV 408
GM+SL+V PIS+A A QRSGRAGR GPGKC+RLY E F D++ + PEI+R NL++
Sbjct: 844 SGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLAST 903
Query: 409 ILQLKALGVDDIIGFDFMEKP 429
+LQLKA+G++++I FDFM+ P
Sbjct: 904 LLQLKAMGINNLIDFDFMDAP 924
Score = 345 (126.5 bits), Expect = 1.6e-102, Sum P(2) = 1.6e-102
Identities = 77/152 (50%), Positives = 97/152 (63%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
+++QR+SLPI +++K L+E + N IL++VGETGSGKTTQ+ Q+ AG R GK IG T
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK-IGCT 591
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G +LG VGY+IRF+D TS T IK E L+DP L
Sbjct: 592 QPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDL 651
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
S YS I++DEAHERT+HTDVL GLLK R
Sbjct: 652 SGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 707 (253.9 bits), Expect = 1.6e-102, Sum P(2) = 1.6e-102
Identities = 142/261 (54%), Positives = 190/261 (72%)
Query: 170 DRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+R T+ + L + RK LKLII SA+LD+ FSEYF A + GR FPVEILY
Sbjct: 664 ERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILY 723
Query: 230 TLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLV 289
T PE DYL+A IT+ Q+HL E PGD+LVFLTGQEEI++ ++ ER+ + +L+
Sbjct: 724 TREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELI 783
Query: 290 TVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPV 349
+P++ +LPSE Q R+F PA AG RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+P
Sbjct: 784 ILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPK 843
Query: 350 KGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNV 408
GM+SL+V PIS+A A QRSGRAGR GPGKC+RLY E F D++ + PEI+R NL++
Sbjct: 844 SGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLAST 903
Query: 409 ILQLKALGVDDIIGFDFMEKP 429
+LQLKA+G++++I FDFM+ P
Sbjct: 904 LLQLKAMGINNLIDFDFMDAP 924
Score = 345 (126.5 bits), Expect = 1.6e-102, Sum P(2) = 1.6e-102
Identities = 77/152 (50%), Positives = 97/152 (63%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
+++QR+SLPI +++K L+E + N IL++VGETGSGKTTQ+ Q+ AG R GK IG T
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK-IGCT 591
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G +LG VGY+IRF+D TS T IK E L+DP L
Sbjct: 592 QPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDL 651
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
S YS I++DEAHERT+HTDVL GLLK R
Sbjct: 652 SGYSLIMLDEAHERTIHTDVLFGLLKAAARKR 683
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 689 (247.6 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 136/245 (55%), Positives = 180/245 (73%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K L++IIMSA+L+A FSE+F A+ ++ GRQ+PV+I YT PEPDYLDA L TIF
Sbjct: 237 KKRPALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRTIF 296
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H PGDILVFLTGQ+EIE++E L++ QLP ++ P+F+SLP EQQ++VF
Sbjct: 297 QLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVF 356
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA A RKV+L+TNIAETSVTI GI+YVID G K + ++ G+ESL V PIS++ A+
Sbjct: 357 LPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAM 416
Query: 367 QRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFM 426
QRSGRAGRE G+C+R+Y E +FDKL T PEIKR +LS +L LKA G +D+I F +M
Sbjct: 417 QRSGRAGREAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYM 476
Query: 427 EKPSR 431
+ PS+
Sbjct: 477 DPPSK 481
Score = 339 (124.4 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 70/155 (45%), Positives = 98/155 (63%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
R+ IL+QRK+LPI L ++++ N ++++VGETGSGK+TQ+PQFL + ++G +
Sbjct: 86 RKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEG-CV 144
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
+TQP E G LG++VGYSIRFDD TS TRIK E + D
Sbjct: 145 AITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELIND 204
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P LS+Y +I+DEAHERT+ TD+LLG +KK+ R
Sbjct: 205 PILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKR 239
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 703 (252.5 bits), Expect = 1.6e-101, Sum P(2) = 1.6e-101
Identities = 139/240 (57%), Positives = 182/240 (75%)
Query: 192 LKLIIMSASLDARGFSEYF-GCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 250
L+LI+ SA+LDA FSEYF GC + GR FPVEI+Y+ PE DYLDA LIT+ Q+HL
Sbjct: 723 LRLIVTSATLDADKFSEYFYGCP-IFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHL 781
Query: 251 DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 310
E PGD+L+FLTGQEEI++ ++ ER+ L + +LV +P++S+LPSE Q R+F PA
Sbjct: 782 TEPPGDMLLFLTGQEEIDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAP 841
Query: 311 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 370
G RKV++ATNIAETS+TI I YVIDPGFVK + YDP GM+SL+V PIS+AQA QR+G
Sbjct: 842 PGGRKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAG 901
Query: 371 RAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
RAGR GPGKCFRLY E + ++ +T P+I+R NLS+ IL LKA+G++D++ FDFM+ P
Sbjct: 902 RAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPP 961
Score = 341 (125.1 bits), Expect = 1.6e-101, Sum P(2) = 1.6e-101
Identities = 75/152 (49%), Positives = 96/152 (63%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+SLP+ ++L+E V +N +LI+VG+TGSGKTTQ+ Q+L AG+ G +IG T
Sbjct: 570 IKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKG-IIGCT 628
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G +LG VGY+IRF+D TS T+IK E LLDP L
Sbjct: 629 QPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDL 688
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+YS I++DEAHERT+ TDVL GLLK R
Sbjct: 689 KKYSVIMLDEAHERTIATDVLFGLLKTTLKRR 720
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 694 (249.4 bits), Expect = 1.4e-100, Sum P(2) = 1.4e-100
Identities = 136/250 (54%), Positives = 186/250 (74%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 240
LKQ R+ LK++I SA+L+A FS+YF A+ + GR FPV+I YT PE DYLDA
Sbjct: 644 LKQALQRR-PELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDA 702
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 300
+LIT+ Q+HL E PGDIL+FLTGQEEI++ +++ ER+ L L+ +P++S+LPSE
Sbjct: 703 SLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSE 762
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
Q ++F PA G RKV++ATNIAETS+TI GI YVIDPGF K + ++P GM+SL+V PI
Sbjct: 763 MQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPI 822
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDD 419
S+A A QRSGRAGR GPGKC+RLY E+ F +++ S+ PEI+R NL N +L +KA+G++D
Sbjct: 823 SQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGIND 882
Query: 420 IIGFDFMEKP 429
++ FDFM+ P
Sbjct: 883 LLNFDFMDPP 892
Score = 339 (124.4 bits), Expect = 1.4e-100, Sum P(2) = 1.4e-100
Identities = 75/154 (48%), Positives = 97/154 (62%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
+ I +QR+SLPI + + ++ V ++ +L+++GETGSGKTTQ+ Q+L AG+ GK IG
Sbjct: 499 RSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGK-IG 557
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQP EE G +LGQ VGY+IRF+D TS T IK E LLDP
Sbjct: 558 CTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDP 617
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
LS YS II+DEAHERT+ TDVL GLLK+ R
Sbjct: 618 NLSAYSVIILDEAHERTISTDVLFGLLKQALQRR 651
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 680 (244.4 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 131/242 (54%), Positives = 180/242 (74%)
Query: 191 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 250
PLK+I+MSA++D FS+YF A ++++GRQ P++I YT P+ DYL A L+++FQ+H
Sbjct: 215 PLKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIH- 273
Query: 251 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP 308
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ+RVF
Sbjct: 274 QEAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQG 333
Query: 309 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQR 368
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 334 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 393
Query: 369 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 428
+GRAGRE G C+RLY E+EF+K E T PEI+RCNL++VILQL A+ V +++ FDFM K
Sbjct: 394 TGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSK 453
Query: 429 PS 430
PS
Sbjct: 454 PS 455
Score = 337 (123.7 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 70/157 (44%), Positives = 97/157 (61%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
R+ + QR+SLPI +L+ ++R D +++GETGSGKTTQ+PQ+L+ G R G +I
Sbjct: 55 REALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQG-II 113
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
VTQP +E ELG+ VGY++RF+D TS TRIK EA+ D
Sbjct: 114 AVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISD 173
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
L +YS +I+DEAHERT+HTDVL G++K Q R +
Sbjct: 174 SLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKE 210
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 693 (249.0 bits), Expect = 4.5e-100, Sum P(2) = 4.5e-100
Identities = 134/244 (54%), Positives = 179/244 (73%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LKL+I SA++DA FS+YF A GR++PVEI YT PE DY+DA ++TI
Sbjct: 545 RFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTIL 604
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
+H+ E GDILVF TGQEEIE+ E +++ R+ L R+L+ PI+++LPSE Q ++F
Sbjct: 605 TIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIF 664
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P G RKV+LATNIAETS+TI GIKYV+DPGF K + Y+P GMESLL+ PISKA A
Sbjct: 665 EPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASAT 724
Query: 367 QRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR PGKC+RLY ++ LE++T PE++R NL++V+L LK+LG+ D+I FDF
Sbjct: 725 QRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDF 784
Query: 426 MEKP 429
M+ P
Sbjct: 785 MDPP 788
Score = 329 (120.9 bits), Expect = 4.5e-100, Sum P(2) = 4.5e-100
Identities = 69/154 (44%), Positives = 99/154 (64%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
+++ + R+SLPI + +L++ V ++ +L+IVG+TGSGKTTQ+PQ+L AG+ + GK +G
Sbjct: 395 EELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGK-VG 453
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQP +E GV+LG VGYSIRF+D TS T +K E L +P
Sbjct: 454 CTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEP 513
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L+ YS +IVDEAHERT+ TD+L GL+K + R
Sbjct: 514 DLASYSVVIVDEAHERTLSTDILFGLVKDIARFR 547
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 692 (248.7 bits), Expect = 4.5e-100, Sum P(2) = 4.5e-100
Identities = 137/240 (57%), Positives = 175/240 (72%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LK+I+ SA+LD+ FS YF + + GR FPVE+LYT PE DYL A L ++ Q+H+
Sbjct: 486 LKVIVTSATLDSNKFSRYFNNCPIITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVS 545
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 311
E GDILVFLTGQEEIE+ + ER+ L E +L+ +P++S+LPSE Q R+F P
Sbjct: 546 EPAGDILVFLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPP 605
Query: 312 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 371
G RKVILATNIAETS+TI GI YV+DPGFVK +YD GM+SL V PISKAQA QRSGR
Sbjct: 606 GSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGR 665
Query: 372 AGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 430
AGR GPGKC+RLY E ++K + +T PEI+R NLS+ IL LKA+G+ D++ F+FM+ PS
Sbjct: 666 AGRTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPS 725
Score = 325 (119.5 bits), Expect = 4.5e-100, Sum P(2) = 4.5e-100
Identities = 74/159 (46%), Positives = 98/159 (61%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDG---KLI 62
I +QR+ LP+ ++ +L+E +R N ++IVGETGSGKTTQ+ Q+++ G + G KLI
Sbjct: 329 IQEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLI 388
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G +LG VGY+IRF+D TS +T IK EAL D
Sbjct: 389 GCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALND 448
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKV--QNARSK 150
P ++RYS I++DEAHERT+ TDVL LLK QN K
Sbjct: 449 PNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLK 487
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 663 (238.4 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 129/244 (52%), Positives = 176/244 (72%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LKL+I SA+LDA FS +F A + GR++PV+I YT PE DY+DA +++
Sbjct: 394 RFRPELKLLISSATLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVL 453
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H + GDILVFLTGQ+EIE+ + ++ +R+ +L R+L+ +P++++LPS+ Q ++F
Sbjct: 454 QIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIF 513
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P RKVILATNIAETS+TI I YVIDPGF K ++ GMESL+VVPISKA A
Sbjct: 514 EPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASAN 573
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR PGKCFRLY + +LED+T PEI+R NL N +L LKALG++D+I FDF
Sbjct: 574 QRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDF 633
Query: 426 MEKP 429
++ P
Sbjct: 634 LDPP 637
Score = 347 (127.2 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 72/150 (48%), Positives = 97/150 (64%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQP 67
+ R+SLP+ ++ L+ V+++ +LII GETGSGKTTQ+PQ+L AGF +D K+IG TQP
Sbjct: 247 ETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQP 306
Query: 68 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSR 118
EE GV+LG VGYSIRF+D TS T +K E L +P L+
Sbjct: 307 RRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLAS 366
Query: 119 YSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
YS +I+DEAHERT+HTD+L GL+K + R
Sbjct: 367 YSVMIIDEAHERTLHTDILFGLVKDIARFR 396
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 670 (240.9 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 128/242 (52%), Positives = 180/242 (74%)
Query: 191 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 250
PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ DYL A L+++FQ+H
Sbjct: 224 PLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIH- 282
Query: 251 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP 308
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ+RVF
Sbjct: 283 QEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQG 342
Query: 309 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQR 368
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 343 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 402
Query: 369 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 428
+GRAGRE G C+RLY E+EF+K + T PEI+RCNL++V+LQL A+ V +++ FDFM K
Sbjct: 403 TGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSK 462
Query: 429 PS 430
PS
Sbjct: 463 PS 464
Score = 339 (124.4 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 70/151 (46%), Positives = 94/151 (62%)
Query: 9 QRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPX 68
QR+SLPI +L+ ++R D +++GETGSGKTTQ+PQ+L+ G R G +I VTQP
Sbjct: 70 QRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQG-IIAVTQPR 128
Query: 69 XXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRY 119
+E ELG+ VGY++RFDD TS TRIK EA+ D L +Y
Sbjct: 129 RVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKY 188
Query: 120 SAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
S +I+DEAHERT+HTDVL G++K Q R +
Sbjct: 189 SCVILDEAHERTIHTDVLFGVVKAAQKRRKE 219
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 672 (241.6 bits), Expect = 1.3e-99, Sum P(2) = 1.3e-99
Identities = 132/250 (52%), Positives = 180/250 (72%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 240
LK+ R+ L+LI+ SA+LDA FS YF + GR FPVEILYT PE DYLDA
Sbjct: 651 LKKLMKRRL-DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDA 709
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 300
LIT+ Q+HL E GDILVFLTGQEEI+S + + ER+ L + +L+ +P++S+LPSE
Sbjct: 710 ALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSE 769
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
Q R+F P G RKV++ATNIAE S+TI GI YV+DPGF K +Y+P +G+ESL++ PI
Sbjct: 770 MQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPI 829
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDD 419
S+A A QR+GRAGR GPGKC+RLY E+ + +++ ++ PEI+R NL L +KA+G++D
Sbjct: 830 SQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGIND 889
Query: 420 IIGFDFMEKP 429
++ FDFM+ P
Sbjct: 890 LLSFDFMDPP 899
Score = 353 (129.3 bits), Expect = 1.3e-99, Sum P(2) = 1.3e-99
Identities = 75/152 (49%), Positives = 97/152 (63%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I +QR+SLPI ++K L++ V N +L+++GETGSGKTTQ+ Q+L AG+ GK IG T
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGK-IGCT 566
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G LG+ VGY+IRF+D T T IK E L+D L
Sbjct: 567 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 626
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
S+YS I++DEAHERT+HTDVL GLLKK+ R
Sbjct: 627 SQYSVIMLDEAHERTIHTDVLFGLLKKLMKRR 658
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 691 (248.3 bits), Expect = 3.0e-99, Sum P(2) = 3.0e-99
Identities = 135/244 (55%), Positives = 182/244 (74%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K LKLI+ SA+LDA FS+YF A + GR FPVE+LYT PE DYLDA+LIT+
Sbjct: 727 QKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVM 786
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+HL E PGDIL+FLTGQEEI++ ++ ER+ L +L+ +P++S+LPSE Q R+F
Sbjct: 787 QIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIF 846
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA AG RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ GM+SL+V PIS+A A
Sbjct: 847 DPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAK 906
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGK +RLY E + D++ + PEI+R NL+ +LQLK +G++D++ FDF
Sbjct: 907 QRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDF 966
Query: 426 MEKP 429
M+ P
Sbjct: 967 MDAP 970
Score = 332 (121.9 bits), Expect = 3.0e-99, Sum P(2) = 3.0e-99
Identities = 74/152 (48%), Positives = 92/152 (60%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
+++QR+SLPI + L++ V N ILI++GETGSGKTTQ+ Q+L GF GK IG T
Sbjct: 579 LVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGK-IGCT 637
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G LGQ VGY+IRF+D TS T IK E L++ L
Sbjct: 638 QPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAEL 697
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
YS I++DEAHERT+HTDVL GLLK R
Sbjct: 698 KSYSVIMLDEAHERTIHTDVLFGLLKTAVQKR 729
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 665 (239.2 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 131/245 (53%), Positives = 180/245 (73%)
Query: 191 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 250
PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ DYL A L+++FQ+H
Sbjct: 174 PLKVIVMSATMDVDQFSQYFNGAPVLYLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIH- 232
Query: 251 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP 308
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ+RVF
Sbjct: 233 QEAPSSQDILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQA 292
Query: 309 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQR 368
A G RKVIL+TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SKAQA QR
Sbjct: 293 APKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQR 352
Query: 369 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK---RCNLSNVILQLKALGVDDIIGFDF 425
+GRAGRE G C+RLY E+EF+K + T PEI+ RCNL++V+LQL AL + +I+ FDF
Sbjct: 353 TGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDF 412
Query: 426 MEKPS 430
M KPS
Sbjct: 413 MSKPS 417
Score = 339 (124.4 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 71/158 (44%), Positives = 95/158 (60%)
Query: 2 PRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL 61
P QR+ LPI L+ ++R + +++GETGSGKTTQ+PQ+L+ AG R G +
Sbjct: 13 PPPPAASQRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQG-I 71
Query: 62 IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALL 112
I VTQP +E ELG+ VGY++RFDD TS TRIK EA+
Sbjct: 72 IAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIG 131
Query: 113 DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
DP L +YS +I+DEAHERT+HTDVL G++K Q R +
Sbjct: 132 DPILRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKE 169
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 668 (240.2 bits), Expect = 4.2e-99, Sum P(2) = 4.2e-99
Identities = 130/239 (54%), Positives = 177/239 (74%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKL+I SA++DA+ F YF A ++ GR + V+I YT PE +YL A + T+FQ+H+
Sbjct: 628 LKLLISSATMDAQKFQSYFDNAPIFNIPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVS 687
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 311
+ PGDILVFLTGQEEIE+ E+ +QE +L +++ PI+++LPS+ Q ++F P
Sbjct: 688 QGPGDILVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPP 747
Query: 312 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 371
RKV+LATNIAETS+TI GI YVIDPGFVK +++P GMESL+V P S+A A QR+GR
Sbjct: 748 KARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASANQRAGR 807
Query: 372 AGREGPGKCFRLYPE-NEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
AGR GPGKCFRLY + +++LE+ST PEI+R NLS+VIL LK+LG+D ++ FDFM+ P
Sbjct: 808 AGRVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPP 866
Score = 351 (128.6 bits), Expect = 4.2e-99, Sum P(2) = 4.2e-99
Identities = 74/154 (48%), Positives = 95/154 (61%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
Q I RK LPI ++++ V + +LIIVGETGSGKTTQLPQ+L AG+ ++G +G
Sbjct: 472 QTIEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVG 531
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQP EE GV+LG VGYSIRF+D TS T +K E L +P
Sbjct: 532 CTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEP 591
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L +YSA+++DEAHERTV TD+ GLLK + AR
Sbjct: 592 DLGQYSALMIDEAHERTVPTDIACGLLKDIAKAR 625
Score = 39 (18.8 bits), Expect = 3.3e-66, Sum P(2) = 3.3e-66
Identities = 7/26 (26%), Positives = 19/26 (73%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRK 28
RQ+ L++R++ +A + +++ EE ++
Sbjct: 298 RQEYLKKRETERLALLRRQVAEETQE 323
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 672 (241.6 bits), Expect = 7.6e-99, Sum P(2) = 7.6e-99
Identities = 128/242 (52%), Positives = 180/242 (74%)
Query: 191 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 250
PLK+++MSA++D FS+YF A ++++GRQ P++I YT P+ DYL A L+++FQ+H
Sbjct: 231 PLKVLVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIH- 289
Query: 251 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP 308
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ+RVF
Sbjct: 290 QEAPSSHDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQR 349
Query: 309 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQR 368
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 350 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 409
Query: 369 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 428
+GRAGRE G C+RLY E+EF+K E T PEI+RCNL++V+LQL A+ + +++ FDFM K
Sbjct: 410 TGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSK 469
Query: 429 PS 430
PS
Sbjct: 470 PS 471
Score = 329 (120.9 bits), Expect = 7.6e-99, Sum P(2) = 7.6e-99
Identities = 69/156 (44%), Positives = 96/156 (61%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
+ + QQR++LPI +L+ ++R D +++GETGSGKTTQ+PQ+L+ G R +I
Sbjct: 72 EAVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQA-IIA 130
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
VTQP +E ELG+ VGY++RFDD TS T+IK EA+ D
Sbjct: 131 VTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDC 190
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
L +YS II+DEAHERT+HTDVL G++K Q R +
Sbjct: 191 LLRKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKE 226
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 655 (235.6 bits), Expect = 1.1e-98, Sum P(2) = 1.1e-98
Identities = 131/240 (54%), Positives = 171/240 (71%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKL+I SA+LDA FS +F A + GR+FPV+I YT PE DY+DA ++TI Q+HL
Sbjct: 511 LKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLT 570
Query: 252 EA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 310
+ PGDILVFLTGQEEIE+V+ + ER L ++L+ +P++++LPS+ Q ++F P
Sbjct: 571 QPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTP 630
Query: 311 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 370
RKV+LATNIAETSVTI GI YVIDPGF K +D G+E L VV ISKA A QR+G
Sbjct: 631 KDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAG 690
Query: 371 RAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
RAGR GPGKCFRLY + +LE+ PEI+R NL NV+L LK+LG+ D++ FDF++ P
Sbjct: 691 RAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPP 750
Score = 355 (130.0 bits), Expect = 1.1e-98, Sum P(2) = 1.1e-98
Identities = 73/155 (47%), Positives = 98/155 (63%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ I + RKSLP+ + +E V+++ +LII GETGSGKTTQLPQ+L+ AGFC GK I
Sbjct: 354 KMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRI 413
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP +E G +LG +VGYSIRF+D TS T +K E L +
Sbjct: 414 GCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNE 473
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS +++DEAHERT+HTD+L GL+K + R
Sbjct: 474 PDLASYSVMMIDEAHERTLHTDILFGLVKDIARFR 508
Score = 37 (18.1 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 135 DVLLGLLKKVQNARSKSAD 153
D L+GLL++V+ S D
Sbjct: 882 DQLVGLLERVEIETKSSTD 900
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 655 (235.6 bits), Expect = 1.1e-98, Sum P(2) = 1.1e-98
Identities = 131/240 (54%), Positives = 171/240 (71%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKL+I SA+LDA FS +F A + GR+FPV+I YT PE DY+DA ++TI Q+HL
Sbjct: 511 LKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLT 570
Query: 252 EA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 310
+ PGDILVFLTGQEEIE+V+ + ER L ++L+ +P++++LPS+ Q ++F P
Sbjct: 571 QPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTP 630
Query: 311 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 370
RKV+LATNIAETSVTI GI YVIDPGF K +D G+E L VV ISKA A QR+G
Sbjct: 631 KDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAG 690
Query: 371 RAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
RAGR GPGKCFRLY + +LE+ PEI+R NL NV+L LK+LG+ D++ FDF++ P
Sbjct: 691 RAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPP 750
Score = 355 (130.0 bits), Expect = 1.1e-98, Sum P(2) = 1.1e-98
Identities = 73/155 (47%), Positives = 98/155 (63%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ I + RKSLP+ + +E V+++ +LII GETGSGKTTQLPQ+L+ AGFC GK I
Sbjct: 354 KMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRI 413
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP +E G +LG +VGYSIRF+D TS T +K E L +
Sbjct: 414 GCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNE 473
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS +++DEAHERT+HTD+L GL+K + R
Sbjct: 474 PDLASYSVMMIDEAHERTLHTDILFGLVKDIARFR 508
Score = 37 (18.1 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 135 DVLLGLLKKVQNARSKSAD 153
D L+GLL++V+ S D
Sbjct: 882 DQLVGLLERVEIETKSSTD 900
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 662 (238.1 bits), Expect = 2.2e-98, Sum P(2) = 2.2e-98
Identities = 126/244 (51%), Positives = 179/244 (73%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R+ LKL+I SA+++A F+ YF A ++ GR++PV+I YT PE +YL A + T+F
Sbjct: 515 RERKDLKLLISSATMNAEKFASYFDDAPIFNIPGRRYPVDIYYTPAPEANYLSAAITTVF 574
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H + GDIL+FLTGQ+EIE+ E + E +L ++LV PI+++LPSE Q ++F
Sbjct: 575 QIHTTQPKGDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSKIF 634
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P RKV+LATNIAETS+TI GI YVIDPG+VK +Y+P GM +L+VVP S+A A
Sbjct: 635 EPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASAN 694
Query: 367 QRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QRSGRAGR GPGKCFRLY + + +++E+ST PEI+R NL+ V+LQLK+LG+++++ F+F
Sbjct: 695 QRSGRAGRVGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEF 754
Query: 426 MEKP 429
M+ P
Sbjct: 755 MDPP 758
Score = 345 (126.5 bits), Expect = 2.2e-98, Sum P(2) = 2.2e-98
Identities = 74/156 (47%), Positives = 97/156 (62%)
Query: 3 RQKILQQ-RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL 61
RQ +Q+ RKSLPI + + + IL+IVGETGSGKTTQLPQ+L AG+ +DG
Sbjct: 362 RQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDGMR 421
Query: 62 IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALL 112
+G TQP +E GV++G VGYSIRF+D TS T +K E +
Sbjct: 422 VGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREFMT 481
Query: 113 DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+P LS YSA+++DEAHERTVHTD+LL L+K + R
Sbjct: 482 EPDLSSYSALMIDEAHERTVHTDILLALVKDLARER 517
Score = 37 (18.1 bits), Expect = 6.6e-66, Sum P(2) = 6.6e-66
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 3 RQKILQQRKSLPIASVEKRLVEE 25
RQ+ ++R++ IA K++ EE
Sbjct: 191 RQEYFKKRETEKIALFRKQVAEE 213
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 674 (242.3 bits), Expect = 5.5e-98, Sum P(2) = 5.5e-98
Identities = 129/239 (53%), Positives = 176/239 (73%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKL+I SA++DA FS++F A GR++PV+I +T PE DY+DA + T+ +H+
Sbjct: 550 LKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVK 609
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 311
E GD+LVFL GQEEIE+VE ++ ++ L R+L+ PI+++LPSE Q ++F P
Sbjct: 610 EPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPE 669
Query: 312 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 371
G RKV+LATNIAETS+TI GIKYV+DPGF K + Y+P GMESLLV PISKA A QR+GR
Sbjct: 670 GARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGR 729
Query: 372 AGREGPGKCFRLYPE-NEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
AGR PGKC+RLY N ++ LED+T PEI+R NL++V+L LK+LG+ +++ FDFM+ P
Sbjct: 730 AGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPP 788
Score = 330 (121.2 bits), Expect = 5.5e-98, Sum P(2) = 5.5e-98
Identities = 74/153 (48%), Positives = 97/153 (63%)
Query: 6 ILQQ-RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
+LQ+ RK+LPI + +L+ V+ + +LIIVGETGSGKTTQ+PQ+L AG+ + GK +G
Sbjct: 396 MLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGK-VGC 454
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPY 115
TQP +E G +LG VGYSIRF+D TS T +K E L +P
Sbjct: 455 TQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPD 514
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L YS IIVDEAHERT+ TD+L GL+K + AR
Sbjct: 515 LGSYSVIIVDEAHERTLRTDILFGLVKDIARAR 547
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 666 (239.5 bits), Expect = 4.7e-97, Sum P(2) = 4.7e-97
Identities = 124/242 (51%), Positives = 186/242 (76%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LK+II SA+++A FS++F A +++ GR+FPV+I YT PE +Y+ A + TIFQ+H+
Sbjct: 379 LKIIIASATINAEKFSQFFNNAPILNIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMT 438
Query: 252 EA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 310
+ PGDILVFLTGQ+EIE++E ++++ +L+L + ++ I+++LP E Q ++F P
Sbjct: 439 QPLPGDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTP 498
Query: 311 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 370
+ RK++LATNIAETS+TI GI YVIDPG+VK +Y+P GMESL+VVP S+A A QR+G
Sbjct: 499 SNTRKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAG 558
Query: 371 RAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
RAGR GPGKCFRL+ + F ++L+ + +PEI+R NL++VIL L +LG++D++GF+FM+ P
Sbjct: 559 RAGRVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPP 618
Query: 430 SR 431
S+
Sbjct: 619 SK 620
Score = 318 (117.0 bits), Expect = 4.7e-97, Sum P(2) = 4.7e-97
Identities = 67/151 (44%), Positives = 91/151 (60%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXX 69
RKSLP+ S + ++ + +N LI+VGETGSGKTTQLPQ+L AG+ R+ ++I TQP
Sbjct: 226 RKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQPRR 285
Query: 70 XXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----------KEALLDPYLSRY 119
E V+LG++VGY+IRFDD + +E L DP L +Y
Sbjct: 286 VAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLGKY 345
Query: 120 SAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
SAI++DEAHERT+ T++LL LLK V K
Sbjct: 346 SAIMIDEAHERTLSTEILLSLLKDVMMTTRK 376
Score = 39 (18.8 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 224 PVEILYTLYPEPDYL 238
P +Y L P+P YL
Sbjct: 823 PSSCIYKLKPKPKYL 837
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 649 (233.5 bits), Expect = 7.1e-97, Sum P(2) = 7.1e-97
Identities = 125/244 (51%), Positives = 175/244 (71%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LKL+I SA++DA FS+YF A ++ GR++ V YT PE DYLDA ++T+
Sbjct: 608 RFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVL 667
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ E GDILVFLTGQEE++ ++Q R L ++L+ I+S+LP++ Q ++F
Sbjct: 668 QIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIF 727
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P RKV+LATNIAETS+TI GI YVIDPGF K ++++P GMESL++ P+S+A A
Sbjct: 728 EPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASAN 787
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR GRAGR PGKCFRL+ FD +LE++T PEI+R NL NV+L LK++G++D++ FDF
Sbjct: 788 QRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNFDF 847
Query: 426 MEKP 429
M+ P
Sbjct: 848 MDPP 851
Score = 349 (127.9 bits), Expect = 7.1e-97, Sum P(2) = 7.1e-97
Identities = 75/155 (48%), Positives = 97/155 (62%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ I + RKSLP+ ++L++ VR+ +LIIVGETGSGKTTQ+PQ+L AGF + GK I
Sbjct: 457 KMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK-I 515
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST---------RIKEALLD 113
G TQP EE G +LG VGYSIRF+D TS T ++E L
Sbjct: 516 GCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTA 575
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS +I+DEAHERT+HTD+L GLLK + R
Sbjct: 576 PDLASYSVLIIDEAHERTLHTDILFGLLKDITRFR 610
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 665 (239.2 bits), Expect = 2.7e-96, Sum P(2) = 2.7e-96
Identities = 133/246 (54%), Positives = 178/246 (72%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
RK A KLI+ SA+LDA FS YF + + G+ FPVEIL++ PE DY++A+LIT+
Sbjct: 772 RKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVL 831
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK-LVTVPIFSSLPSEQQMRV 305
+HL+E PGDILVFLTGQ+EI + ++ ER+ +L S L+ +PI+SSLPSE Q +
Sbjct: 832 NIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVI 891
Query: 306 FAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQA 365
F PA G RK ILATNIAE S+TI GI +VIDPGF K + YD + M+SL+V PISKA A
Sbjct: 892 FEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANA 951
Query: 366 LQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 424
QR+GRAGR GPGKC+RLY E + +++ + + PEI+R NL +++L LKALG++D + FD
Sbjct: 952 KQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFD 1011
Query: 425 FMEKPS 430
FM+ PS
Sbjct: 1012 FMDSPS 1017
Score = 332 (121.9 bits), Expect = 2.7e-96, Sum P(2) = 2.7e-96
Identities = 73/153 (47%), Positives = 95/153 (62%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I +QR LPI +++ L++ + KN++LI++GETGSGKTTQ+PQ+L A + G ++G T
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKG-IVGCT 682
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G LGQ VGYSIRFDD TS T IK E L D L
Sbjct: 683 QPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLL 742
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
++YS II+DEAHERT+ TD+L LLK V R+
Sbjct: 743 TKYSFIILDEAHERTISTDILFCLLKDVVRKRA 775
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 665 (239.2 bits), Expect = 2.7e-96, Sum P(2) = 2.7e-96
Identities = 133/246 (54%), Positives = 178/246 (72%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
RK A KLI+ SA+LDA FS YF + + G+ FPVEIL++ PE DY++A+LIT+
Sbjct: 772 RKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVL 831
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK-LVTVPIFSSLPSEQQMRV 305
+HL+E PGDILVFLTGQ+EI + ++ ER+ +L S L+ +PI+SSLPSE Q +
Sbjct: 832 NIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVI 891
Query: 306 FAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQA 365
F PA G RK ILATNIAE S+TI GI +VIDPGF K + YD + M+SL+V PISKA A
Sbjct: 892 FEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANA 951
Query: 366 LQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 424
QR+GRAGR GPGKC+RLY E + +++ + + PEI+R NL +++L LKALG++D + FD
Sbjct: 952 KQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFD 1011
Query: 425 FMEKPS 430
FM+ PS
Sbjct: 1012 FMDSPS 1017
Score = 332 (121.9 bits), Expect = 2.7e-96, Sum P(2) = 2.7e-96
Identities = 73/153 (47%), Positives = 95/153 (62%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I +QR LPI +++ L++ + KN++LI++GETGSGKTTQ+PQ+L A + G ++G T
Sbjct: 624 INEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKG-IVGCT 682
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G LGQ VGYSIRFDD TS T IK E L D L
Sbjct: 683 QPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLL 742
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
++YS II+DEAHERT+ TD+L LLK V R+
Sbjct: 743 TKYSFIILDEAHERTISTDILFCLLKDVVRKRA 775
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 661 (237.7 bits), Expect = 3.9e-96, Sum P(2) = 3.9e-96
Identities = 128/244 (52%), Positives = 178/244 (72%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 554 RFRPDLKVLVASATLDTERFSSFFDDAPVFRIPGRRFPVDIYYTKAPEADYLEACVVSVL 613
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ ++PGD+LVFLTGQEEIE+ L+QER +L +L+ +PI+++LPS+ Q ++F
Sbjct: 614 QIHVTQSPGDVLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIF 673
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P G RKV++ATNIAETS+TI GI YVIDPGF K + Y+ GMESL+V P S+A A
Sbjct: 674 NPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASAN 733
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GKCFRLY F ++E++T PEI+R NL NV+L LK+LG++D+I FDF
Sbjct: 734 QRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDF 793
Query: 426 MEKP 429
M+ P
Sbjct: 794 MDPP 797
Score = 327 (120.2 bits), Expect = 3.9e-96, Sum P(2) = 3.9e-96
Identities = 70/155 (45%), Positives = 93/155 (60%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+Q I + R+SLPI + L+ + + IL+I GETGSGKTTQ+PQ+L G+ + G I
Sbjct: 402 KQSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTKGGMKI 461
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP +E V+LG VGYSIRF+D TS T +K E L +
Sbjct: 462 GCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFLTE 521
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS II+DEAHERT+HTD+L GL+K + R
Sbjct: 522 PDLASYSVIIIDEAHERTLHTDILFGLIKDIARFR 556
Score = 38 (18.4 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 8/39 (20%), Positives = 24/39 (61%)
Query: 2 PRQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGS 40
P++ ++++ P ++E++++E RKN ++ ++ S
Sbjct: 68 PKKHVVEK----PARAIERQVMEMERKNRTYTLLEDSES 102
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 656 (236.0 bits), Expect = 5.0e-96, Sum P(2) = 5.0e-96
Identities = 123/241 (51%), Positives = 180/241 (74%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LK+I+ SA+L++ FSEYF +++ G+ FPVE+LY+ P+ DY++A L + +H++
Sbjct: 629 LKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHIN 688
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 311
E PGDILVFLTGQEEI+S ++ +R+ L ++ +L+ +P++S+LPSE Q ++F P
Sbjct: 689 EGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPK 748
Query: 312 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 371
G RKV+ ATNIAETS+TI GI YV+DPGF K +Y+ G+E L+V PIS+AQA QR GR
Sbjct: 749 GSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGR 808
Query: 372 AGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 430
AGR GPGKC+RLY E+ F +++ ++T PEI+R NLS+ IL LKA+G++D++ FDFM+ P
Sbjct: 809 AGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPP 868
Query: 431 R 431
+
Sbjct: 869 K 869
Score = 335 (123.0 bits), Expect = 5.0e-96, Sum P(2) = 5.0e-96
Identities = 74/147 (50%), Positives = 93/147 (63%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QR++LP+ ++ L++ VR N L+IVGETGSGKTTQ+ Q+L GF G +IG T
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYG-MIGCT 534
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G ++G VGY+IRF+D T TRIK EALLDP +
Sbjct: 535 QPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEM 594
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKK 143
S+YS I++DEAHERTV TDVL LLKK
Sbjct: 595 SKYSVIMLDEAHERTVATDVLFALLKK 621
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 684 (245.8 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 134/246 (54%), Positives = 181/246 (73%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
RK PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ DYL A L+++F
Sbjct: 130 RKL-PLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALVSVF 188
Query: 247 QVHLDEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMR 304
Q+H EAP DILVFLTGQEEIE+V + ++ LP+ ++ +P+++SLP QQ+R
Sbjct: 189 QIH-QEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLR 247
Query: 305 VFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 364
VF A G RKVI+ATNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK Q
Sbjct: 248 VFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQ 307
Query: 365 ALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 424
A QR+GRAGRE G C+RLY ENEF+K E T PEI+RCNL++V+LQL A+ V +++ FD
Sbjct: 308 AWQRAGRAGREDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQLLAMKVPNVLTFD 367
Query: 425 FMEKPS 430
FM KPS
Sbjct: 368 FMSKPS 373
Score = 289 (106.8 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 63/124 (50%), Positives = 77/124 (62%)
Query: 36 GETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSI 95
GETGSGKTTQLPQ+L+ G R G +I VTQP +E ELG+ VGY++
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQG-VIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTV 64
Query: 96 RFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQN 146
RFDD +S TRIK EA+ D L +YS II+DEAHERTVHTDVL G++K Q
Sbjct: 65 RFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQR 124
Query: 147 ARSK 150
R +
Sbjct: 125 RRKE 128
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 639 (230.0 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 127/241 (52%), Positives = 173/241 (71%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKL+I SA+++A+ FSE+F +V GR++PV+I YTL PE +Y+ A + TIFQ+H
Sbjct: 372 LKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTT 431
Query: 252 EA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 310
++ PGDILVFLTGQEEIE + ++E + +L +++++ PI+++LP EQQ+++F P
Sbjct: 432 QSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTP 491
Query: 311 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 370
RKV+LATNIAETS+TI GI+YVIDPGFVK Y P GM LL VP S+A QR+G
Sbjct: 492 ENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAG 551
Query: 371 RAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
RAGR GPGKCFR++ + + +LE KPEI R NLSN +L L +LGV D+I F M+KP
Sbjct: 552 RAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKP 611
Query: 430 S 430
S
Sbjct: 612 S 612
Score = 330 (121.2 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 69/150 (46%), Positives = 95/150 (63%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-IGV 64
I + RK LP+ + L++E++KN +LII+GETGSGKTTQLPQ+L GF GKL I +
Sbjct: 216 IQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAI 275
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----------KEALLDP 114
TQP +E V LG+ VGY IRF+D+T+ + + +E L D
Sbjct: 276 TQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDS 335
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
LS+YS I++DEAHERT+ TD+L+GLLK +
Sbjct: 336 KLSKYSCIMIDEAHERTLATDILIGLLKDI 365
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 657 (236.3 bits), Expect = 2.1e-95, Sum P(2) = 2.1e-95
Identities = 127/244 (52%), Positives = 177/244 (72%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 545 RFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 604
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 605 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 664
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 665 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 724
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 725 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 784
Query: 426 MEKP 429
++ P
Sbjct: 785 LDPP 788
Score = 324 (119.1 bits), Expect = 2.1e-95, Sum P(2) = 2.1e-95
Identities = 71/155 (45%), Positives = 93/155 (60%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I R+SLP+ + L+ V + ILII GETGSGKTTQ+PQ+LF G+ + G I
Sbjct: 393 KESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKI 452
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R-------IKEALLD 113
TQP E GV+LG VGYSIRF+D TS T R ++E L +
Sbjct: 453 ACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE 512
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 513 PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 547
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 657 (236.3 bits), Expect = 2.1e-95, Sum P(2) = 2.1e-95
Identities = 127/244 (52%), Positives = 177/244 (72%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 545 RFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 604
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 605 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 664
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 665 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 724
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 725 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 784
Query: 426 MEKP 429
++ P
Sbjct: 785 LDPP 788
Score = 324 (119.1 bits), Expect = 2.1e-95, Sum P(2) = 2.1e-95
Identities = 71/155 (45%), Positives = 93/155 (60%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I R+SLP+ + L+ V + ILII GETGSGKTTQ+PQ+LF G+ + G I
Sbjct: 393 KESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKI 452
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R-------IKEALLD 113
TQP E GV+LG VGYSIRF+D TS T R ++E L +
Sbjct: 453 ACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE 512
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 513 PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 547
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 657 (236.3 bits), Expect = 2.6e-95, Sum P(2) = 2.6e-95
Identities = 127/244 (52%), Positives = 177/244 (72%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 544 RFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 603
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 604 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 663
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 664 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 723
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 724 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 783
Query: 426 MEKP 429
++ P
Sbjct: 784 LDPP 787
Score = 323 (118.8 bits), Expect = 2.6e-95, Sum P(2) = 2.6e-95
Identities = 69/155 (44%), Positives = 93/155 (60%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF G+ + G I
Sbjct: 392 KESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKI 451
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R-------IKEALLD 113
TQP E GV+LG VGYSIRF+D TS T R ++E L +
Sbjct: 452 ACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE 511
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 512 PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 546
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 656 (236.0 bits), Expect = 3.4e-95, Sum P(2) = 3.4e-95
Identities = 127/244 (52%), Positives = 177/244 (72%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 545 RFRPELKVLVASATLDTARFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 604
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 605 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 664
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 665 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 724
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 725 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 784
Query: 426 MEKP 429
++ P
Sbjct: 785 LDPP 788
Score = 323 (118.8 bits), Expect = 3.4e-95, Sum P(2) = 3.4e-95
Identities = 69/155 (44%), Positives = 93/155 (60%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF G+ + G I
Sbjct: 393 KESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKI 452
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R-------IKEALLD 113
TQP E GV+LG VGYSIRF+D TS T R ++E L +
Sbjct: 453 ACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE 512
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 513 PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 547
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 657 (236.3 bits), Expect = 4.1e-95, Sum P(2) = 4.1e-95
Identities = 127/244 (52%), Positives = 177/244 (72%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK+++ SA+LD FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 542 RFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 601
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 602 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 661
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 662 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 721
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 722 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 781
Query: 426 MEKP 429
++ P
Sbjct: 782 LDPP 785
Score = 321 (118.1 bits), Expect = 4.1e-95, Sum P(2) = 4.1e-95
Identities = 68/155 (43%), Positives = 93/155 (60%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ + R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF G+ + G I
Sbjct: 390 KESVQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKI 449
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R-------IKEALLD 113
TQP E GV+LG VGYSIRF+D TS T R ++E L +
Sbjct: 450 ACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE 509
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 510 PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 544
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 655 (235.6 bits), Expect = 6.9e-95, Sum P(2) = 6.9e-95
Identities = 126/244 (51%), Positives = 177/244 (72%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK+++ SA++D FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 541 RFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 600
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 601 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 660
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 661 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 720
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 721 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 780
Query: 426 MEKP 429
++ P
Sbjct: 781 LDPP 784
Score = 321 (118.1 bits), Expect = 6.9e-95, Sum P(2) = 6.9e-95
Identities = 69/155 (44%), Positives = 92/155 (59%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF G+ G I
Sbjct: 389 KESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKI 448
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R-------IKEALLD 113
TQP E GV+LG VGYSIRF+D TS T R ++E L +
Sbjct: 449 ACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE 508
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 509 PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 543
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 602 (217.0 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 123/267 (46%), Positives = 177/267 (66%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG---------------CAKAVHVQGRQ 222
+ LK+ R+ L++I+ SA+L A F YF K + ++GR
Sbjct: 156 LGILKKILKRR-PELRIIVSSATLQAEDFLRYFAGDESQQGPNGEVGGNTGKIISIEGRM 214
Query: 223 FPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLP 282
+PV+ L+ +Y++ ++ T+F +HL E GDIL+FLTG+EEIE+ +L+ ER L
Sbjct: 215 YPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFLTGREEIETAIQLISERATTLH 274
Query: 283 EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 342
S+ L+ +P+++ L ++QQM VF PA RKV+++TNIAE SVTI GI YV+D GF K
Sbjct: 275 PKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAK 334
Query: 343 ARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKR 402
R YDP G+E+L VPISKA A+QR+GRAGR PGKCFRLY ++ +++L D+T PEI+R
Sbjct: 335 LRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCFRLYTQHAYEQLPDATIPEIQR 394
Query: 403 CNLSNVILQLKALGVDDIIGFDFMEKP 429
NL+ VI+QLKALG+D+I+ FDF+ P
Sbjct: 395 SNLAPVIMQLKALGIDNIVRFDFLTSP 421
Score = 356 (130.4 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 76/145 (52%), Positives = 96/145 (66%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 72
LPIA ++ ++ V + I+VG+TGSGKTTQLPQ+L AG+C +GK I VTQP
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAVTQPRRVAA 81
Query: 73 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAII 123
EE +LG+ VGYSIRF+DRTS TRIK EAL+DP LSRYS I+
Sbjct: 82 TTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLSRYSVIM 141
Query: 124 VDEAHERTVHTDVLLGLLKKVQNAR 148
VDEAHER++ TD+LLG+LKK+ R
Sbjct: 142 VDEAHERSLSTDILLGILKKILKRR 166
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 629 (226.5 bits), Expect = 2.2e-93, Sum P(2) = 2.2e-93
Identities = 128/272 (47%), Positives = 187/272 (68%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +I+D ++ + +NT LK+ R++ +KLI+ SA++D++ FS +FG +
Sbjct: 774 SAIIMDEAHERS-LNTDVLFGILKKVMSRRY-DMKLIVTSATMDSKKFSMFFGDVPVFTI 831
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 278
GR FPV++L++ P DY+D+ + I +H+ + GDILVF+TGQE+IE+ V+ER+
Sbjct: 832 PGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVFMTGQEDIETTCATVEERI 891
Query: 279 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 338
QL + L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI YVID
Sbjct: 892 KQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDT 951
Query: 339 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTK 397
G+ K ++Y+P GM+SL V PISKA A QRSGRAGR GPG+C+RLY E+ F +L D+
Sbjct: 952 GYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNI 1011
Query: 398 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
PEI+R NL NV+L LK++GV +++ FDFM+ P
Sbjct: 1012 PEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPP 1043
Score = 343 (125.8 bits), Expect = 2.2e-93, Sum P(2) = 2.2e-93
Identities = 76/152 (50%), Positives = 98/152 (64%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I +QR+ LPI L++ +R+N+++IIVGETGSGKTTQL Q+L+ G+ + GK IG T
Sbjct: 652 IKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKFGK-IGCT 710
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE V LG VGYSIRF+D TS T IK E+ DP L
Sbjct: 711 QPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRESFNDPNL 770
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+YSAII+DEAHER+++TDVL G+LKKV + R
Sbjct: 771 DKYSAIIMDEAHERSLNTDVLFGILKKVMSRR 802
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 639 (230.0 bits), Expect = 2.4e-93, Sum P(2) = 2.4e-93
Identities = 125/244 (51%), Positives = 175/244 (71%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK++I SA++DA FS YF A +V GR++PV+I YT PE +Y+ A + TI
Sbjct: 560 RFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTIL 619
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H + GDILVFLTGQ+EIE + +QE L + +++ PI+++LPSE Q ++F
Sbjct: 620 QIHTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAKIF 679
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P G RKV+LATNIAETS+TI G+ +VID GFVK +Y+P GMESL+ VP S+A A
Sbjct: 680 DPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRASAD 739
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GPGKCFRLY ++ +L+ T PEI+R NL+N++L LK+LG+++++ FDF
Sbjct: 740 QRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDFDF 799
Query: 426 MEKP 429
M+ P
Sbjct: 800 MDAP 803
Score = 324 (119.1 bits), Expect = 2.4e-93, Sum P(2) = 2.4e-93
Identities = 72/155 (46%), Positives = 94/155 (60%)
Query: 4 QKILQQ-RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+K L+ RKSLP+ + L++ + + +L+IV ETGSGKTTQLPQFL AG+ + K I
Sbjct: 408 EKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKI 467
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
TQP +E V LGQ VGYSIRF++ TS T IK E L +
Sbjct: 468 CCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTE 527
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS II+DEAHERT+HTD+L GL+K + R
Sbjct: 528 PDLASYSVIIIDEAHERTLHTDILFGLVKDIARFR 562
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 619 (223.0 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 134/282 (47%), Positives = 185/282 (65%)
Query: 165 SDMILDRGNDTN-----GINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKA---- 215
S +ILD ++ I LK+ +K L+LI+ SA+LDA+ F ++F ++
Sbjct: 161 SVLILDEAHERTLYTDIAIGLLKKIL-KKRRDLRLIVASATLDAKKFQDFFNLNESGDAS 219
Query: 216 ------VHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIES 269
+ V+GR FPV+I YT+ P PDY+ AT+ T+ ++H E GD+L FLTGQEE+E
Sbjct: 220 KDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEK 279
Query: 270 VERLVQERLLQLPEASRK--LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSV 327
V L+QE+ L K L +P+++ LP +QMRVF A RKV++ATNIAETS+
Sbjct: 280 VVSLLQEQARTLSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSI 339
Query: 328 TIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPEN 387
TI G+ +VID FVK R Y+P +ESL+V PISKA A QR+GRAGR GKCFRLY E
Sbjct: 340 TINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEE 399
Query: 388 EFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
+F+KL +ST PE++R NL+ VILQLKALG+D+++ F F+ P
Sbjct: 400 DFEKLPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPP 441
Score = 324 (119.1 bits), Expect = 1.0e-92, Sum P(2) = 1.0e-92
Identities = 69/153 (45%), Positives = 94/153 (61%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I +QR+ LP+ ++ V ++IVGETGSGK+TQ+PQ+L AG+ +GK+IGVT
Sbjct: 37 IEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVT 96
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QP EE G LG VGY+IRFDD + +TRIK E + DP
Sbjct: 97 QPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPL 156
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L +YS +I+DEAHERT++TD+ +GLLKK+ R
Sbjct: 157 LKKYSVLILDEAHERTLYTDIAIGLLKKILKKR 189
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 610 (219.8 bits), Expect = 1.3e-92, Sum P(2) = 1.3e-92
Identities = 126/272 (46%), Positives = 186/272 (68%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 186 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFASFFGNVPIFHI 243
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 278
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 244 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 303
Query: 279 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 338
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 304 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 362
Query: 339 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 397
G+ K ++++P GM++L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T
Sbjct: 363 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 422
Query: 398 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
PEI+R NL+NV+L LK+LGV D++ F FM+ P
Sbjct: 423 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPP 454
Score = 332 (121.9 bits), Expect = 1.3e-92, Sum P(2) = 1.3e-92
Identities = 76/156 (48%), Positives = 101/156 (64%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ IL+QR+ LPI +V++ L+ +R N I+I+VGETGSGKTTQL Q+L G+ G +I
Sbjct: 61 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MI 119
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LG+ VGY+IRF+D TS ST IK E+L +
Sbjct: 120 GCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLRE 179
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
L YSAII+DEAHER+++TDVL GLL++V RS
Sbjct: 180 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRS 215
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 637 (229.3 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 132/248 (53%), Positives = 171/248 (68%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKL++MSA+L+A F EYF A + V GR PVEI YT PE DYL+A + T+ Q+H+
Sbjct: 217 LKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 276
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA- 310
E PGDILVFLTG+EEIE R + + + L + + VP++S+LP Q ++F PA
Sbjct: 277 EPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPV 336
Query: 311 -------AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 363
AG RK++++TNIAETS+TI GI YVIDPGF K ++Y+P +ESLLV PISKA
Sbjct: 337 PLTEGGPAG-RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKA 395
Query: 364 QALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIG 422
A QRSGRAGR PGKCFRLY E F+ L+ T PEI R NL+N +L LK LG+DD++
Sbjct: 396 SAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH 455
Query: 423 FDFMEKPS 430
FDFM+ P+
Sbjct: 456 FDFMDPPA 463
Score = 303 (111.7 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 70/158 (44%), Positives = 94/158 (59%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD---GK- 60
+IL++R+ LP+ + + + N LI+VGETGSGKTTQ+PQF+ A + G+
Sbjct: 57 EILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRK 116
Query: 61 -LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EA 110
L+G TQP +E V +G+ VGYSIRF+D TS+ T +K EA
Sbjct: 117 WLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREA 176
Query: 111 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+ DP L RY II+DEAHERT+ TDVL GLLK+V R
Sbjct: 177 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNR 214
Score = 40 (19.1 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 371 RAGREGPGKCFRLYPENEFDKLEDSTKPEIKR 402
+ E P CF + N K D+ + ++ R
Sbjct: 566 KQNNEDPNWCFENFVNNRAMKSADNVRQQLVR 597
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 604 (217.7 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 130/265 (49%), Positives = 176/265 (66%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 226
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNDTSDPPRDTCV-ILTVEGRTFPVD 246
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 284
I Y P PDY+ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 306
Query: 285 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 344
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 345 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 404
Y+P +E L+VVP+S+A A QR+GRAGR GKC+RLY E+ FD+L ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAFDQLPQSTVPEMQRSN 426
Query: 405 LSNVILQLKALGVDDIIGFDFMEKP 429
L+ VILQLKALG+D+++ F FM P
Sbjct: 427 LAPVILQLKALGIDNVLRFHFMSPP 451
Score = 336 (123.3 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
Identities = 69/153 (45%), Positives = 97/153 (63%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+ LP+ + ++ + ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QP EE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L++YSAI++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKR 199
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 598 (215.6 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 129/265 (48%), Positives = 174/265 (65%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 226
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDTCV-ILTVEGRTFPVD 246
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 284
I Y P PDY+ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGM 306
Query: 285 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 344
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRILPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 345 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 404
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E FD+L ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSN 426
Query: 405 LSNVILQLKALGVDDIIGFDFMEKP 429
L+ VILQLKALG+D+++ F FM P
Sbjct: 427 LAPVILQLKALGIDNVLRFHFMSPP 451
Score = 336 (123.3 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 68/153 (44%), Positives = 98/153 (64%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+ LP+ + ++ + ++I+GETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QP EE G LG VGY IRFDD T+ +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPL 166
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L++YSAI++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKR 199
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 597 (215.2 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 129/265 (48%), Positives = 173/265 (65%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 226
I LK+ Q RK L+L++ SA+LDA F ++F C + V+GR FPV+
Sbjct: 181 IGLLKKIQ-RKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCV-ILTVEGRTFPVD 238
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 284
I Y P PDY+ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 239 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 298
Query: 285 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 344
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 299 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 358
Query: 345 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 404
Y+P +E L+V P+S+A A QR+GRAGR GKC+RLY E FDKL T PE++R N
Sbjct: 359 AYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSN 418
Query: 405 LSNVILQLKALGVDDIIGFDFMEKP 429
L+ VILQLKALG+D+++ F FM P
Sbjct: 419 LAPVILQLKALGIDNVLRFHFMSPP 443
Score = 337 (123.7 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 70/153 (45%), Positives = 97/153 (63%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+ LP+ + ++ V ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 39 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 98
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QP EE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 99 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 158
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L++YSAI++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 159 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKR 191
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 597 (215.2 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 129/265 (48%), Positives = 173/265 (65%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 226
I LK+ Q RK L+L++ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-RKRGDLRLLVASATLDAEKFRDFFNQNETSDPTRDTCV-ILTVEGRTFPVD 246
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 284
I Y P PDY+ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGM 306
Query: 285 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 344
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 345 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 404
Y+P +E L+V P+S+A A QR+GRAGR GKC+RLY E FDKL T PE++R N
Sbjct: 367 AYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSN 426
Query: 405 LSNVILQLKALGVDDIIGFDFMEKP 429
L+ VILQLKALG+D+++ F FM P
Sbjct: 427 LAPVILQLKALGIDNVLRFHFMSPP 451
Score = 337 (123.7 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 70/153 (45%), Positives = 97/153 (63%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+ LP+ + ++ V ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QP EE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L++YSAI++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKR 199
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 575 (207.5 bits), Expect = 1.0e-91, Sum P(4) = 1.0e-91
Identities = 115/226 (50%), Positives = 156/226 (69%)
Query: 207 SEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEA-PGDILVFLTGQE 265
SE G A H++GRQFPV+ +Y+ P D++DA L IFQ+H E PGDILVFLTGQE
Sbjct: 355 SEKDGIA-VCHIKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQE 413
Query: 266 EIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAET 325
+E++E LV E + + K+ +P+F++LP Q RVF PA RK+ILATNIAET
Sbjct: 414 TVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAET 473
Query: 326 SVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYP 385
SVT+ G++YV+D G K + + G++SLLV PISK+ A+QR GRAGRE PG+C+RLY
Sbjct: 474 SVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYT 533
Query: 386 ENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
E ++ L++ PEI RC+LS IL +KA GVD++I F F+ +P R
Sbjct: 534 EKDYLALDEVNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPR 579
Score = 180 (68.4 bits), Expect = 1.0e-91, Sum P(4) = 1.0e-91
Identities = 42/110 (38%), Positives = 59/110 (53%)
Query: 59 GKLIGVTQPXXXXXXXXXXXXXEESGVELGQ-----RVGYSIRFDDRTSTSTRIK----- 108
G I +TQP EE G LG +VGYS+RFD S STR+K
Sbjct: 210 GGCIAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTSVSPSTRVKFLTEG 269
Query: 109 ----EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADG 154
E L DP+L++YSAI+VDE HER V+ D+++G L+ + + + + G
Sbjct: 270 MLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGRGG 319
Score = 145 (56.1 bits), Expect = 1.0e-91, Sum P(4) = 1.0e-91
Identities = 26/57 (45%), Positives = 41/57 (71%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
Q + + RK+LPI + + + +RKND+++++GETGSGK+TQ+PQFL +CR K
Sbjct: 138 QMLYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFLVDESWCRPTK 194
Score = 61 (26.5 bits), Expect = 1.0e-91, Sum P(4) = 1.0e-91
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 185 QGRKFAPLKLIIMSASLDARGFSEYF 210
+GR PLK ++MSA+ D E+F
Sbjct: 315 EGRGGVPLKAVVMSATADMESLQEFF 340
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 600 (216.3 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 129/265 (48%), Positives = 174/265 (65%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 226
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 284
I Y P PDY+ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 285 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 344
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 345 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 404
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E FDKL ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 426
Query: 405 LSNVILQLKALGVDDIIGFDFMEKP 429
L+ VILQLKALG+D+++ F FM P
Sbjct: 427 LAPVILQLKALGIDNVLRFHFMSPP 451
Score = 332 (121.9 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 68/153 (44%), Positives = 96/153 (62%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+ LP+ + ++ + ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QP EE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L++YS I++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 199
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 600 (216.3 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 129/265 (48%), Positives = 174/265 (65%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 226
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 284
I Y P PDY+ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 247 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 285 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 344
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 307 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 366
Query: 345 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 404
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E FDKL ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 426
Query: 405 LSNVILQLKALGVDDIIGFDFMEKP 429
L+ VILQLKALG+D+++ F FM P
Sbjct: 427 LAPVILQLKALGIDNVLRFHFMSPP 451
Score = 332 (121.9 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 68/153 (44%), Positives = 96/153 (62%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+ LP+ + ++ + ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QP EE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L++YS I++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 199
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 630 (226.8 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 129/247 (52%), Positives = 169/247 (68%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKL++MSA+L+A F +YF A + V GR PVEI YT PE DYL+A + T+ Q+H+
Sbjct: 213 LKLVVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMC 272
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 311
E PGDILVFLTG+EEIE R + + + L + + VP++S+LP Q ++F PA
Sbjct: 273 EPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPE 332
Query: 312 GF-------RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 364
RK++++TNIAETS+TI GI YVIDPGF K ++Y+P +ESLLV PISKA
Sbjct: 333 PVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKAS 392
Query: 365 ALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGF 423
A QRSGRAGR PGKCFRLY E F+ L+ T PEI R NL+N +L LK LG+DD++ F
Sbjct: 393 AHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 452
Query: 424 DFMEKPS 430
DFM+ P+
Sbjct: 453 DFMDPPA 459
Score = 300 (110.7 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 70/157 (44%), Positives = 94/157 (59%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHA--GFCRDGK--- 60
IL++R++LP+ ++ ++ + N LI+VGETGSGKTTQ+PQF+ A D +
Sbjct: 54 ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113
Query: 61 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EAL 111
L+G TQP EE V +G+ VGYSIRF+D +S T +K EA+
Sbjct: 114 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAM 173
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
DP L RY II+DEAHERT+ TDVL GLLK+V R
Sbjct: 174 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNR 210
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 638 (229.6 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 133/247 (53%), Positives = 173/247 (70%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LK+I+MSA+LDA+ F +YF A + V GR +PVEI YT PE DYL+A L T+ Q+H++
Sbjct: 223 LKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVE 282
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPE--ASRKLVTVPIFSSLPSEQQMRVFAPA 309
E PGDILVFLTG+EEIE R + L A+ L P++ SLP QQ R+F P
Sbjct: 283 EGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPT 342
Query: 310 A----AGF-RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 364
+G+ RKV+++TNIAETS+TI GI YV+DPGF K ++Y+P +ESLLV PISKA
Sbjct: 343 PEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKAS 402
Query: 365 ALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGF 423
A QR+GRAGR PGKCFRLY E F K L + T PEI R NLS+ +L+LK LG+DD++ F
Sbjct: 403 AQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHF 462
Query: 424 DFMEKPS 430
D+M+ P+
Sbjct: 463 DYMDPPA 469
Score = 290 (107.1 bits), Expect = 3.8e-91, Sum P(2) = 3.8e-91
Identities = 63/154 (40%), Positives = 91/154 (59%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR-DGKLIG 63
KIL+ R+ LP+ + ++ +N I++ VGETGSGKTTQ+PQF+ + I
Sbjct: 67 KILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIA 126
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQP +E V+LG+ VGY+IRF+D + +T +K EA+ D
Sbjct: 127 CTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDH 186
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
LSRYS II+DEAHERT+ TD+L+GL+K++ R
Sbjct: 187 MLSRYSCIILDEAHERTLATDILMGLMKRLATRR 220
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 610 (219.8 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 123/245 (50%), Positives = 172/245 (70%)
Query: 188 KFAPLKLIIMSASLDARGFSEYFG--CAKAVHVQGRQFPVEILYTLYPEPDYLDATLITI 245
K A LKLI+ SA++DA F+++FG C + GR FPVE+ + P DY+DA +
Sbjct: 583 KRADLKLIVTSATMDADKFADFFGGNCPTFT-IPGRTFPVELFHARTPVEDYVDAAVKQA 641
Query: 246 FQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 305
+HL GDIL+F+ GQE+IE +++E+L +L EA L +PI+S LPS+ Q ++
Sbjct: 642 VTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAP-PLAVLPIYSQLPSDLQAKI 700
Query: 306 FAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQA 365
F A G RK I+ATNIAETS+T+ GI +VIDPGF K ++Y+P GM++L + P+S+A A
Sbjct: 701 FQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASA 760
Query: 366 LQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 424
QR+GRAGR GPG+C+RLY E +F D+L ST PEI+R NL+NV+L LK+LGVDD++ F
Sbjct: 761 NQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFH 820
Query: 425 FMEKP 429
FM+ P
Sbjct: 821 FMDAP 825
Score = 332 (121.9 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 74/150 (49%), Positives = 99/150 (66%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
+ I QQR+ LP+ + ++++ +R+N+++IIVGETGSGKTTQL Q+L GF D LIG
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF-GDSGLIG 490
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQP +E GV+LGQ VGY+IRF+D TS T IK E L D
Sbjct: 491 CTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDG 550
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L +YSAII+DEAHER+++TDVL GLL++V
Sbjct: 551 SLDQYSAIIMDEAHERSLNTDVLFGLLREV 580
Score = 38 (18.4 bits), Expect = 8.1e-30, Sum P(2) = 8.1e-30
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 264 QEEIESVERLVQERLLQLPEASRKLVTV 291
Q+E+E + ++ + PE+SR++V V
Sbjct: 1090 QKEMER-RKEESDKAFKRPESSRRVVEV 1116
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 610 (219.8 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 123/245 (50%), Positives = 172/245 (70%)
Query: 188 KFAPLKLIIMSASLDARGFSEYFG--CAKAVHVQGRQFPVEILYTLYPEPDYLDATLITI 245
K A LKLI+ SA++DA F+++FG C + GR FPVE+ + P DY+DA +
Sbjct: 583 KRADLKLIVTSATMDADKFADFFGGNCPTFT-IPGRTFPVELFHARTPVEDYVDAAVKQA 641
Query: 246 FQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 305
+HL GDIL+F+ GQE+IE +++E+L +L EA L +PI+S LPS+ Q ++
Sbjct: 642 VTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAP-PLAVLPIYSQLPSDLQAKI 700
Query: 306 FAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQA 365
F A G RK I+ATNIAETS+T+ GI +VIDPGF K ++Y+P GM++L + P+S+A A
Sbjct: 701 FQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASA 760
Query: 366 LQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 424
QR+GRAGR GPG+C+RLY E +F D+L ST PEI+R NL+NV+L LK+LGVDD++ F
Sbjct: 761 NQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFH 820
Query: 425 FMEKP 429
FM+ P
Sbjct: 821 FMDAP 825
Score = 332 (121.9 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 74/150 (49%), Positives = 99/150 (66%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
+ I QQR+ LP+ + ++++ +R+N+++IIVGETGSGKTTQL Q+L GF D LIG
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGF-GDSGLIG 490
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQP +E GV+LGQ VGY+IRF+D TS T IK E L D
Sbjct: 491 CTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDG 550
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L +YSAII+DEAHER+++TDVL GLL++V
Sbjct: 551 SLDQYSAIIMDEAHERSLNTDVLFGLLREV 580
Score = 38 (18.4 bits), Expect = 8.1e-30, Sum P(2) = 8.1e-30
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 264 QEEIESVERLVQERLLQLPEASRKLVTV 291
Q+E+E + ++ + PE+SR++V V
Sbjct: 1090 QKEMER-RKEESDKAFKRPESSRRVVEV 1116
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 610 (219.8 bits), Expect = 1.8e-90, Sum P(2) = 1.8e-90
Identities = 126/272 (46%), Positives = 186/272 (68%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 647 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFASFFGNVPIFHI 704
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 278
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 705 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 764
Query: 279 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 338
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 765 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 339 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 397
G+ K ++++P GM++L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T
Sbjct: 824 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 883
Query: 398 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
PEI+R NL+NV+L LK+LGV D++ F FM+ P
Sbjct: 884 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPP 915
Score = 332 (121.9 bits), Expect = 1.8e-90, Sum P(2) = 1.8e-90
Identities = 76/156 (48%), Positives = 101/156 (64%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ IL+QR+ LPI +V++ L+ +R N I+I+VGETGSGKTTQL Q+L G+ G +I
Sbjct: 522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MI 580
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LG+ VGY+IRF+D TS ST IK E+L +
Sbjct: 581 GCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLRE 640
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
L YSAII+DEAHER+++TDVL GLL++V RS
Sbjct: 641 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRS 676
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 587 (211.7 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 128/266 (48%), Positives = 174/266 (65%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG----------CAKAVHVQGRQFPVEI 227
I LK+ Q +K L+LI+ SA+LDA F ++F + + V+GR FPV+I
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDI 247
Query: 228 LYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEAS 285
Y P PDY+ +T+ T ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 248 FYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMR 307
Query: 286 RKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARL 345
+ L +P+++ LPS QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 308 KHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRA 367
Query: 346 YDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYP--ENEFDKLEDSTKPEIKRC 403
Y+P +E L+VVP+SKA A QR+GRAGR GKC+RLY E +F+KL ST PE++R
Sbjct: 368 YNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRS 427
Query: 404 NLSNVILQLKALGVDDIIGFDFMEKP 429
NL+ VILQLKALG+D+++ F F+ P
Sbjct: 428 NLAPVILQLKALGIDNVLRFPFLSPP 453
Score = 332 (121.9 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 69/153 (45%), Positives = 95/153 (62%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+ LP+ + ++ V L+IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QP +E G LG VGY IRFDD T +TRIK E + DP
Sbjct: 107 QPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPL 166
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L+RYS +++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKR 199
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 609 (219.4 bits), Expect = 4.8e-90, Sum P(2) = 4.8e-90
Identities = 126/272 (46%), Positives = 186/272 (68%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 647 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFAAFFGNVPIFHI 704
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 278
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 705 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 764
Query: 279 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 338
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 765 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 339 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 397
G+ K ++++P GM++L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T
Sbjct: 824 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 883
Query: 398 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
PEI+R NL+NV+L LK+LGV D++ F FM+ P
Sbjct: 884 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPP 915
Score = 329 (120.9 bits), Expect = 4.8e-90, Sum P(2) = 4.8e-90
Identities = 75/156 (48%), Positives = 101/156 (64%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ IL+QR+ LPI +V++ L+ +R N I+I+VGETGSGKTTQL Q+L G+ G +I
Sbjct: 522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MI 580
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LG+ VGY+IRF+D TS +T IK E+L +
Sbjct: 581 GCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLRE 640
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
L YSAII+DEAHER+++TDVL GLL++V RS
Sbjct: 641 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRS 676
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 589 (212.4 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 126/265 (47%), Positives = 173/265 (65%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 226
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 286
I Y P PDY+ AT+ T+ ++H E GDIL FLTGQEE+E+V ++ E+ L
Sbjct: 247 IFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 287 K--LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 344
K L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GF+K R
Sbjct: 307 KKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLR 366
Query: 345 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 404
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E F++L ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSN 426
Query: 405 LSNVILQLKALGVDDIIGFDFMEKP 429
L+ V+LQLKALG+D ++ F FM P
Sbjct: 427 LAPVVLQLKALGIDSVLRFHFMSPP 451
Score = 328 (120.5 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 67/153 (43%), Positives = 96/153 (62%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+ LP+ + ++ V ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QP +E G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L++YS +++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKR 199
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 589 (212.4 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 126/265 (47%), Positives = 173/265 (65%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 226
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 189 IGLLKKIQ-KKRGDLRLIVASATLDAEKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 246
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 286
I Y P PDY+ AT+ T+ ++H E GDIL FLTGQEE+E+V ++ E+ L
Sbjct: 247 IFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGM 306
Query: 287 K--LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 344
K L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GF+K R
Sbjct: 307 KKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLR 366
Query: 345 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 404
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E F++L ST PE++R N
Sbjct: 367 AYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSN 426
Query: 405 LSNVILQLKALGVDDIIGFDFMEKP 429
L+ V+LQLKALG+D ++ F FM P
Sbjct: 427 LAPVVLQLKALGIDSVLRFHFMSPP 451
Score = 328 (120.5 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 67/153 (43%), Positives = 96/153 (62%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+ LP+ + ++ V ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVT 106
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QP +E G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPL 166
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L++YS +++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKR 199
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 609 (219.4 bits), Expect = 6.1e-90, Sum P(2) = 6.1e-90
Identities = 126/272 (46%), Positives = 186/272 (68%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 646 SAVIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFAAFFGNVPIFHI 703
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 278
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 704 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 763
Query: 279 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 338
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 764 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 822
Query: 339 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 397
G+ K ++++P GM++L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T
Sbjct: 823 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 882
Query: 398 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
PEI+R NL+NV+L LK+LGV D++ F FM+ P
Sbjct: 883 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPP 914
Score = 328 (120.5 bits), Expect = 6.1e-90, Sum P(2) = 6.1e-90
Identities = 74/156 (47%), Positives = 101/156 (64%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ IL+QR+ LPI +V++ L+ +R N I+I+VGETGSGKTTQL Q+L G+ G +I
Sbjct: 521 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MI 579
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LG+ VGY+IRF+D TS +T IK E+L +
Sbjct: 580 GCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLRE 639
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
L YSA+I+DEAHER+++TDVL GLL++V RS
Sbjct: 640 ADLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRS 675
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 607 (218.7 bits), Expect = 7.2e-90, Sum P(2) = 7.2e-90
Identities = 127/272 (46%), Positives = 186/272 (68%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +I+D ++ +NT LK+ R+ LKLI+ SA+++A FS +FG A +
Sbjct: 303 SCIIMDEAHE-RALNTDVLMGLLKKILARR-RDLKLIVTSATMNAERFSRFFGGAPEFII 360
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 278
GR FPV++ ++ P DY+D+ + + +H+ + PGDILVF+TGQE+IE+ LV ERL
Sbjct: 361 PGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVDERL 420
Query: 279 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 338
L + KL +PI+S +P+EQQ ++F AA G RKVI+ATNIAETS+T+ GI +V+D
Sbjct: 421 KLLNDPP-KLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDS 479
Query: 339 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 397
G+ K ++Y+P GM++L + PIS+A A QRSGRAGR GPGK +RLY E + +++ T
Sbjct: 480 GYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTI 539
Query: 398 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
PEI+R +LSN +L LK+LGV D++ FDFM+ P
Sbjct: 540 PEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPP 571
Score = 318 (117.0 bits), Expect = 7.2e-90, Sum P(2) = 7.2e-90
Identities = 70/152 (46%), Positives = 97/152 (63%)
Query: 3 RQKIL-QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL 61
+ K L +QR+ LP +V + L+ +R N ++++VGETGSGKTTQL QFL+ G+ + G +
Sbjct: 177 KSKTLREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKFG-M 235
Query: 62 IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALL 112
IG TQP EE V+LG VGY+IRF+D T +T IK E+L+
Sbjct: 236 IGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRESLV 295
Query: 113 DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L +YS II+DEAHER ++TDVL+GLLKK+
Sbjct: 296 QTDLDKYSCIIMDEAHERALNTDVLMGLLKKI 327
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 607 (218.7 bits), Expect = 8.0e-90, Sum P(2) = 8.0e-90
Identities = 126/272 (46%), Positives = 186/272 (68%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 648 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDADKFAAFFGNVPIFHI 705
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 278
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 706 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 765
Query: 279 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 338
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 766 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 824
Query: 339 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 397
G+ K ++++P GM++L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T
Sbjct: 825 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 884
Query: 398 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
PEI+R NL+NV+L LK+LGV D++ F FM+ P
Sbjct: 885 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPP 916
Score = 329 (120.9 bits), Expect = 8.0e-90, Sum P(2) = 8.0e-90
Identities = 75/156 (48%), Positives = 101/156 (64%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ IL+QR+ LPI +V++ L+ +R N I+I+VGETGSGKTTQL Q+L G+ G +I
Sbjct: 523 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYTDYG-MI 581
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LG+ VGY+IRF+D TS +T IK E+L +
Sbjct: 582 GCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLRE 641
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
L YSAII+DEAHER+++TDVL GLL++V RS
Sbjct: 642 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRS 677
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 570 (205.7 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 126/243 (51%), Positives = 163/243 (67%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKLI+MSA+L+A F +YF A + V GR PVEI YT DYL++ + T+ +H +
Sbjct: 224 LKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTN 283
Query: 252 EAPGDILVFLTGQEEIES----VERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFA 307
E GDILVFLTG+EEIE ++R +ER LP + T+P++SSLP QQ ++F
Sbjct: 284 EGTGDILVFLTGEEEIEDTCAKIQRETRER--GLPP----MKTLPLYSSLPIYQQSKIFD 337
Query: 308 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQ 367
RK I++TNIAETS+TI GI +V+DPGF K + Y+P +ESLLV PISKA A Q
Sbjct: 338 TCKE--RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQ 395
Query: 368 RSGRAGREGPGKCFRLYPENEFDKLE-DSTKPEIKRCNLSNVILQLKALGVDDIIGFDFM 426
R+GRAGR PGKCFRLY E F +L T PEI R NL++V+LQL LGV D++ FDFM
Sbjct: 396 RAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFM 455
Query: 427 EKP 429
+ P
Sbjct: 456 DPP 458
Score = 344 (126.2 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 68/153 (44%), Positives = 100/153 (65%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
+IL++RK LP+ ++ ++ +++N ++I+VGETGSGKTTQ+PQF+ AG R GK++GV
Sbjct: 69 EILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGV 128
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPY 115
TQP EE ELG+ VGYSIRF++ +S T +K E++ DP
Sbjct: 129 TQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPT 188
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L++Y II+DEAHERT+ TD+L GL+K + R
Sbjct: 189 LNKYDVIILDEAHERTLSTDILFGLIKDILKRR 221
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 636 (228.9 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 132/252 (52%), Positives = 177/252 (70%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R+ + LKL++MSA+LDA F +YF A + V GR PVEI YT PE DYL+A + T+
Sbjct: 214 RQRSDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVI 273
Query: 247 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 305
Q+H+ +E GDIL+FLTGQEEIE + ++ + L +L +P++S+LP Q R+
Sbjct: 274 QIHMCEEIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRI 333
Query: 306 FAPA----AAGF--RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVP 359
F PA A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV P
Sbjct: 334 FEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSP 393
Query: 360 ISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVD 418
ISKA A QRSGRAGR PGKCFRLY E F ++++D+T PEI R NL V+LQLK LG+D
Sbjct: 394 ISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGID 453
Query: 419 DIIGFDFMEKPS 430
D++ FDFM+ P+
Sbjct: 454 DLVHFDFMDPPA 465
Score = 275 (101.9 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 59/155 (38%), Positives = 90/155 (58%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
Q + ++R +LP+ + + + + +++VGETGSGKTTQ+PQ+ + K +
Sbjct: 63 QNLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSKGRKGVS 122
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQP EE V+LG+ VGYSIRF+D ++ T +K EA+ DP
Sbjct: 123 CTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDP 182
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
L +Y I++DEAHERT+ TD+L+G+LK+V RS
Sbjct: 183 MLDQYQVILLDEAHERTLATDILMGVLKEVIRQRS 217
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 597 (215.2 bits), Expect = 8.5e-89, Sum P(2) = 8.5e-89
Identities = 119/239 (49%), Positives = 168/239 (70%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKLI+ SA+++A+ FS++FG A + GR FPV+++++ P DY+D + + +H+
Sbjct: 449 LKLIVTSATMNAKRFSDFFGGAPDFTIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVS 508
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 311
GDILVF+TGQE+IE LV+ERL L + KL +PI+S +P++ Q ++F A
Sbjct: 509 MGTGDILVFMTGQEDIEVTCELVRERLDALNDPP-KLSILPIYSQMPADLQAKIFDRAPP 567
Query: 312 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 371
G RK I+ATNIAETS+T+ GI YV+D G+ K ++Y+P GM++L + PIS+A A QRSGR
Sbjct: 568 GVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGR 627
Query: 372 AGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
AGR GPGK FRL+ E F D+L T PEI+R NLSN IL +K+LGV D++ FDFM+ P
Sbjct: 628 AGRTGPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPP 686
Score = 323 (118.8 bits), Expect = 8.5e-89, Sum P(2) = 8.5e-89
Identities = 73/154 (47%), Positives = 97/154 (62%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
+ I +QR+ LP +V + L+ +R N ++I+VGETGSGKTTQL QFL+ G+ + G +IG
Sbjct: 294 KSIREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLG-MIG 352
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQP EE V+LG VGY+IRF+D TS T IK E+L +P
Sbjct: 353 CTQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEP 412
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L RYS II+DEAHER ++TDVL+GL KK+ R
Sbjct: 413 DLDRYSCIIMDEAHERALNTDVLMGLFKKILQRR 446
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 585 (211.0 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 119/272 (43%), Positives = 189/272 (69%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +I+D ++ + +NT LK+ R+ +KL++ SA+++++ FS++FG A +
Sbjct: 607 SVIIMDEAHERS-LNTDILMGLLKKVLSRR-RDIKLLVTSATMNSQKFSDFFGGAPQFTI 664
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 278
GR +PV+I++ P DY++A + + Q+HL + GDILVF+TGQE+IE+ ++ +RL
Sbjct: 665 PGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRL 724
Query: 279 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 338
QL +A R L +PI+S +P++ Q ++F A G RKV++ATNIAETS+T+ GI YV+D
Sbjct: 725 NQLHDAPR-LSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDT 783
Query: 339 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTK 397
G+ K ++Y+ G+++L V PIS+A A QR+GRAGR GPG +RLY E + + + ++T
Sbjct: 784 GYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTL 843
Query: 398 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
PEI+R NLSN +L LK+LGV++I FDFM++P
Sbjct: 844 PEIQRTNLSNTVLILKSLGVEEISDFDFMDRP 875
Score = 340 (124.7 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 74/150 (49%), Positives = 98/150 (65%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQP 67
+QR+ LP +V ++L+ +R N +LI+VGETGSGKTTQL QFL+ G+ R+G +IG TQP
Sbjct: 487 EQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNG-MIGCTQP 545
Query: 68 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSR 118
EE GV LG VGYSIRF+D T T IK E+L+ L +
Sbjct: 546 RRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEK 605
Query: 119 YSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
YS II+DEAHER+++TD+L+GLLKKV + R
Sbjct: 606 YSVIIMDEAHERSLNTDILMGLLKKVLSRR 635
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 599 (215.9 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 137/260 (52%), Positives = 176/260 (67%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 240
LKQ R+ + LK+IIMSA+LDA F YF A + V GR PVEI YT E DY++A
Sbjct: 245 LKQLSLRR-SDLKIIIMSATLDAAKFQRYFFEAPILAVPGRTHPVEIFYTAEAERDYIEA 303
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTV-PIFSSLP 298
++ T+ Q+H EA GDIL+FLTG+EEIE V R V+ + +L +A + V P++ +LP
Sbjct: 304 SVRTVLQIHATEAEGDILLFLTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLP 363
Query: 299 SEQQMRVF----APAAAGFR---KVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
+QQ ++F P G R K I+ATNIAETS+TI GI YV+DPGF K ++Y+
Sbjct: 364 PQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIR 423
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVIL 410
+ESLLV PIS+A A QR+GRAGR PGKCFRLY E F K L + T PEI R NLSN IL
Sbjct: 424 VESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTIL 483
Query: 411 QLKALGVDDIIGFDFMEKPS 430
+LK LGVDD++ FDFM+ P+
Sbjct: 484 ELKKLGVDDLVHFDFMDPPA 503
Score = 306 (112.8 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 65/155 (41%), Positives = 96/155 (61%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR-DGKLIG 63
KIL+ R++LP+ + ++ K I++ VGETGSGKTTQ+PQ++ + + K++
Sbjct: 99 KILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVA 158
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQP +E VELGQ VGYSIRF+++T+ ST +K E + DP
Sbjct: 159 CTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHDP 218
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
++RYS II+DEAHERT+ TD+L+ LLK++ RS
Sbjct: 219 NMTRYSCIIIDEAHERTLATDILMALLKQLSLRRS 253
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 610 (219.8 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 132/258 (51%), Positives = 170/258 (65%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 240
LKQ R+ LK+IIMSA+LDA F YF A + V GR +PVE+ YT + DYLD+
Sbjct: 231 LKQVVKRR-PDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDS 289
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTVPIFSSLP 298
+ T+ Q+H E GDIL+FLTG++EIE R + QL E L P++ SLP
Sbjct: 290 AIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLP 349
Query: 299 SEQQMRVFAPAAAGF-----RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
QQ R+F PA RKV+++TNIAETS+TI GI YV+DPGF K ++Y+P +E
Sbjct: 350 PHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVE 409
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQL 412
SLLV PISKA A QR+GRAGR PGKCFRLY E F K L + + PEI R NLS+ +L+L
Sbjct: 410 SLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLEL 469
Query: 413 KALGVDDIIGFDFMEKPS 430
K LG+DD++ FDFM+ P+
Sbjct: 470 KKLGIDDLVHFDFMDPPA 487
Score = 294 (108.6 bits), Expect = 1.3e-88, Sum P(2) = 1.3e-88
Identities = 68/153 (44%), Positives = 92/153 (60%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQF-LFHAGFCRDGKLIGV 64
IL+ R+ LP+ + ++ + N I++ VGETGSGKTTQ+PQF LF + +
Sbjct: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVAC 145
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPY 115
TQP EE V+LG+ VGYSIRF+++TS T +K EA+ D
Sbjct: 146 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 205
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
LSRYS II+DEAHERT+ TD+L+GLLK+V R
Sbjct: 206 LSRYSCIILDEAHERTLATDILMGLLKQVVKRR 238
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 605 (218.0 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 138/282 (48%), Positives = 183/282 (64%)
Query: 165 SDMILDRGND----TNGI-NTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQ 219
S +ILD ++ T+ + LK+ R+ LK+IIMSA+LDA+ F YF A + V
Sbjct: 216 STIILDEAHERTMSTDVLMGLLKEVVQRR-PDLKIIIMSATLDAQKFQRYFNDAPLLAVP 274
Query: 220 GRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQ---E 276
GR PVEI YT PE DY++A + T+ Q+H E GDIL+FLTG+EEIE R + +
Sbjct: 275 GRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAARKISLEGD 334
Query: 277 RLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA-----AGF--RKVILATNIAETSVTI 329
+++ +A L ++ SLP Q R+F PA G RKVI++TNIAETS+TI
Sbjct: 335 EMIREADAG-PLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTI 393
Query: 330 PGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF 389
GI YV+DPGF K ++Y+P +ESLLV PISKA A QR+GRAGR PGKCFRLY E+ F
Sbjct: 394 DGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAF 453
Query: 390 DK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 430
K L D T PEI R NLS+ +L+LK LG+DD++ FD M+ P+
Sbjct: 454 KKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPA 495
Score = 295 (108.9 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 69/153 (45%), Positives = 91/153 (59%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR-DGKLIGV 64
IL+ R+ LP+ + ++ +++ IL+ VGETGSGKTTQ+PQF+ + K+I
Sbjct: 92 ILKTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKMIAC 151
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPY 115
TQP E V LG+ VGYSIRF+D TS T +K EA+ D
Sbjct: 152 TQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDHE 211
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
LSRYS II+DEAHERT+ TDVL+GLLK+V R
Sbjct: 212 LSRYSTIILDEAHERTMSTDVLMGLLKEVVQRR 244
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 604 (217.7 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 124/253 (49%), Positives = 174/253 (68%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 255 RQRSDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 314
Query: 247 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 305
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L + +P++S+LP +QQ R+
Sbjct: 315 QIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRI 374
Query: 306 FAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 375 FEPPPPRKPNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVT 433
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGV 417
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG+
Sbjct: 434 AISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGI 493
Query: 418 DDIIGFDFMEKPS 430
DD++ FDFM+ P+
Sbjct: 494 DDLVHFDFMDPPA 506
Score = 282 (104.3 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 68/160 (42%), Positives = 93/160 (58%)
Query: 2 PRQ-KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
PR +IL++R LP+ ++R + + ++ ++VGETGSGKTTQ+PQ+ G
Sbjct: 99 PRYYEILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGP 158
Query: 61 LIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 109
GV TQP +E V LGQ VGYSIRF+D +S T +K E
Sbjct: 159 KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 218
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
A+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 219 AMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 258
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 609 (219.4 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 127/254 (50%), Positives = 176/254 (69%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R+ A LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 248 RQRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 307
Query: 247 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 304
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 308 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVG-DIKIIPLYSTLPPQQQQR 366
Query: 305 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 357
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 367 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 425
Query: 358 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 416
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 426 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 485
Query: 417 VDDIIGFDFMEKPS 430
+DD++ FDFM+ P+
Sbjct: 486 IDDLVHFDFMDPPA 499
Score = 276 (102.2 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 67/160 (41%), Positives = 92/160 (57%)
Query: 2 PRQ-KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
PR IL++R LP+ ++R + + ++ ++VGETGSGKTTQ+PQ+ G
Sbjct: 92 PRYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGP 151
Query: 61 LIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 109
GV TQP +E V LGQ VGYSIRF+D +S T +K E
Sbjct: 152 KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 211
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
A+ DP L RY II+DEAHERT+ TD+L+G+LK+V R+
Sbjct: 212 AMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRA 251
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 601 (216.6 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 133/261 (50%), Positives = 170/261 (65%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 240
LKQ R+ LK+IIMSA+LDA F YF A + V GR PVEI YT + DYLDA
Sbjct: 232 LKQVSVRR-PDLKIIIMSATLDAEKFQNYFNNAPLLAVPGRTHPVEIYYTPEFQRDYLDA 290
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQ---ERLLQLPEASRKLVTVPIFSSL 297
+ T+ Q+H E GDIL+FLTG+EEIE R + + L++ L P++ SL
Sbjct: 291 AIRTVLQIHATEGEGDILLFLTGEEEIEDACRKISLEGDELVREQNCG-PLKVYPLYGSL 349
Query: 298 PSEQQMRVFAPAAAG-------FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVK 350
P QQ ++F PA RKVI++TNIAETS+TI GI YV+DPGF K ++Y+P
Sbjct: 350 PPHQQQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRV 409
Query: 351 GMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVI 409
+ESLLV PISKA A QR+GRAGR PGKCFRLY E F K L + + PEI R NLS+ +
Sbjct: 410 RVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTV 469
Query: 410 LQLKALGVDDIIGFDFMEKPS 430
L+LK LG+DD++ FDFM+ P+
Sbjct: 470 LELKKLGIDDLVHFDFMDPPA 490
Score = 284 (105.0 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 63/153 (41%), Positives = 90/153 (58%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR-DGKLIGV 64
IL+ R+ LP+ + + ++ I++ VGETGSGKTTQ+PQF+ + GK +
Sbjct: 87 ILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQVAC 146
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPY 115
TQP +E VELG+ VGY+IRF++ + T +K EA+ D
Sbjct: 147 TQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMEDHD 206
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L+RYS II+DEAHERT+ TD+L+GLLK+V R
Sbjct: 207 LTRYSCIILDEAHERTLATDILMGLLKQVSVRR 239
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 605 (218.0 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 126/254 (49%), Positives = 176/254 (69%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 247 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 304
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 305 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 357
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 358 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 416
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 417 VDDIIGFDFMEKPS 430
+DD++ FDFM+ P+
Sbjct: 519 IDDLVHFDFMDPPA 532
Score = 278 (102.9 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 68/160 (42%), Positives = 91/160 (56%)
Query: 2 PRQ-KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
PR IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+ G
Sbjct: 125 PRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGP 184
Query: 61 LIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 109
GV TQP +E V LGQ VGYSIRF+D +S T +K E
Sbjct: 185 KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
A+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 245 AMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 100 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 134
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHS 97
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 605 (218.0 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 126/254 (49%), Positives = 176/254 (69%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 247 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 304
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 305 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 357
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 358 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 416
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 417 VDDIIGFDFMEKPS 430
+DD++ FDFM+ P+
Sbjct: 519 IDDLVHFDFMDPPA 532
Score = 278 (102.9 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 68/160 (42%), Positives = 91/160 (56%)
Query: 2 PRQ-KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
PR IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+ G
Sbjct: 125 PRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGP 184
Query: 61 LIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 109
GV TQP +E V LGQ VGYSIRF+D +S T +K E
Sbjct: 185 KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
A+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 245 AMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 100 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 134
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHS 97
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 605 (218.0 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 126/254 (49%), Positives = 176/254 (69%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 247 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 304
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 305 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 357
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 358 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 416
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 417 VDDIIGFDFMEKPS 430
+DD++ FDFM+ P+
Sbjct: 519 IDDLVHFDFMDPPA 532
Score = 278 (102.9 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 68/160 (42%), Positives = 91/160 (56%)
Query: 2 PRQ-KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
PR IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+ G
Sbjct: 125 PRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGP 184
Query: 61 LIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 109
GV TQP +E V LGQ VGYSIRF+D +S T +K E
Sbjct: 185 KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
A+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 245 AMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 100 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 134
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHS 97
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 605 (218.0 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 126/254 (49%), Positives = 176/254 (69%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 247 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 304
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 305 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 357
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 358 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 416
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 417 VDDIIGFDFMEKPS 430
+DD++ FDFM+ P+
Sbjct: 519 IDDLVHFDFMDPPA 532
Score = 278 (102.9 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 68/160 (42%), Positives = 91/160 (56%)
Query: 2 PRQ-KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
PR IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+ G
Sbjct: 125 PRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGP 184
Query: 61 LIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 109
GV TQP +E V LGQ VGYSIRF+D +S T +K E
Sbjct: 185 KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
A+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 245 AMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 100 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 134
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSAHSTHS 97
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 605 (218.0 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 126/254 (49%), Positives = 176/254 (69%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 247 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 304
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 305 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 357
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 358 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 416
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 417 VDDIIGFDFMEKPS 430
+DD++ FDFM+ P+
Sbjct: 519 IDDLVHFDFMDPPA 532
Score = 278 (102.9 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 68/160 (42%), Positives = 91/160 (56%)
Query: 2 PRQ-KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
PR IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+ G
Sbjct: 125 PRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGP 184
Query: 61 LIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 109
GV TQP +E V LGQ VGYSIRF+D +S T +K E
Sbjct: 185 KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
A+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 245 AMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 100 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 134
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHS 97
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 605 (218.0 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 126/254 (49%), Positives = 176/254 (69%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R+ + LK+I+MSA+LDA F YF + + GR PVEI YT PE DYL+A + T+
Sbjct: 281 RQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVI 340
Query: 247 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQL-PEASRKLVTVPIFSSLPSEQQMR 304
Q+H+ +E GD+L+FLTGQEEI+ + ++ + L PE + +P++S+LP +QQ R
Sbjct: 341 QIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVG-DIKIIPLYSTLPPQQQQR 399
Query: 305 VFAP-------AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 357
+F P A G RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV
Sbjct: 400 IFEPPPPKKQNGAIG-RKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLV 458
Query: 358 VPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALG 416
ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL +V+LQLK LG
Sbjct: 459 TAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLG 518
Query: 417 VDDIIGFDFMEKPS 430
+DD++ FDFM+ P+
Sbjct: 519 IDDLVHFDFMDPPA 532
Score = 278 (102.9 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 68/160 (42%), Positives = 91/160 (56%)
Query: 2 PRQ-KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
PR IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+ G
Sbjct: 125 PRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGP 184
Query: 61 LIGV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 109
GV TQP +E V LGQ VGYSIRF+D +S T +K E
Sbjct: 185 KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLRE 244
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
A+ DP L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 245 AMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRS 284
Score = 37 (18.1 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 100 RTSTSTRIKEALLDPYLSRYSAIIVDEAHE-RTVHT 134
R ST+ + A L P + +SA AH + H+
Sbjct: 62 RASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHS 97
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 607 (218.7 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 125/252 (49%), Positives = 170/252 (67%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R A +K++IMSA+LDA F YF + V GR FPVEI +T E DYL+A + T+
Sbjct: 225 RNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVI 284
Query: 247 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 305
Q+H+ +E GDIL+FLTGQEEIE + + + L + L +P++S+LP Q R+
Sbjct: 285 QIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRI 344
Query: 306 FAPA------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVP 359
F PA A RK +++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV P
Sbjct: 345 FEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCP 404
Query: 360 ISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVD 418
ISKA A+QR+GRAGR PGKCFRLY E + +++D T PEI R NL +V+LQLK LG +
Sbjct: 405 ISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTE 464
Query: 419 DIIGFDFMEKPS 430
D++ FDFM+ P+
Sbjct: 465 DLVHFDFMDPPA 476
Score = 263 (97.6 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 62/160 (38%), Positives = 90/160 (56%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH-AGFCRDG----- 59
I ++R LP+ +++ +E +R N + +VGETGSGKTTQ+PQ+ + G
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 60 -KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 109
+L+ TQP EE V LGQ VGYSIRF+D S T +K E
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLRE 188
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
A+ P L +Y +I+DEAHERT+ TD+L+GL+K++ R+
Sbjct: 189 AMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRA 228
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 607 (218.7 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 125/252 (49%), Positives = 170/252 (67%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
R A +K++IMSA+LDA F YF + V GR FPVEI +T E DYL+A + T+
Sbjct: 225 RNRADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVI 284
Query: 247 QVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRV 305
Q+H+ +E GDIL+FLTGQEEIE + + + L + L +P++S+LP Q R+
Sbjct: 285 QIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRI 344
Query: 306 FAPA------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVP 359
F PA A RK +++TNIAETS+TI G+ +VIDPGF K ++Y+P +ESLLV P
Sbjct: 345 FEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCP 404
Query: 360 ISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVD 418
ISKA A+QR+GRAGR PGKCFRLY E + +++D T PEI R NL +V+LQLK LG +
Sbjct: 405 ISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTE 464
Query: 419 DIIGFDFMEKPS 430
D++ FDFM+ P+
Sbjct: 465 DLVHFDFMDPPA 476
Score = 263 (97.6 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 62/160 (38%), Positives = 90/160 (56%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH-AGFCRDG----- 59
I ++R LP+ +++ +E +R N + +VGETGSGKTTQ+PQ+ + G
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 60 -KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 109
+L+ TQP EE V LGQ VGYSIRF+D S T +K E
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLRE 188
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
A+ P L +Y +I+DEAHERT+ TD+L+GL+K++ R+
Sbjct: 189 AMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRA 228
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 349 (127.9 bits), Expect = 1.0e-83, Sum P(3) = 1.0e-83
Identities = 66/117 (56%), Positives = 89/117 (76%)
Query: 314 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 373
RK+IL+TNI ETS+TI I YVID G K ++Y+P G+ESL+ +P SKA QR+GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 374 REGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 430
R+ GKCFRL+ + F L D++ PEI+RC +S++IL LK+LG+DDII FDF++ PS
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPS 919
Score = 284 (105.0 bits), Expect = 1.0e-83, Sum P(3) = 1.0e-83
Identities = 63/154 (40%), Positives = 93/154 (60%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
+KI+ +RK LPI S +++ ++ N ILI+VGETGSGK+TQL Q+L+ + G +I
Sbjct: 429 KKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNII- 487
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDP 114
TQP EE V++G+ VGY IRF ++TS +T+I + L +P
Sbjct: 488 CTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNP 547
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L S +I+DEAHER +HTDV+L ++K + N R
Sbjct: 548 TLEDISVLIIDEAHERALHTDVILPIVKDICNFR 581
Score = 275 (101.9 bits), Expect = 1.0e-83, Sum P(3) = 1.0e-83
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
++++I SA+LDA S YF CA +V GR++ V+I YT+ E +Y+ A +ITI Q+H+
Sbjct: 584 IRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHIT 643
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
+ GDILVFL GQ EIE V++ ++ +L +L R LV +PI+SSLP E Q R+F
Sbjct: 644 QGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 349 (127.9 bits), Expect = 1.0e-83, Sum P(3) = 1.0e-83
Identities = 66/117 (56%), Positives = 89/117 (76%)
Query: 314 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 373
RK+IL+TNI ETS+TI I YVID G K ++Y+P G+ESL+ +P SKA QR+GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 374 REGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPS 430
R+ GKCFRL+ + F L D++ PEI+RC +S++IL LK+LG+DDII FDF++ PS
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPS 919
Score = 284 (105.0 bits), Expect = 1.0e-83, Sum P(3) = 1.0e-83
Identities = 63/154 (40%), Positives = 93/154 (60%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
+KI+ +RK LPI S +++ ++ N ILI+VGETGSGK+TQL Q+L+ + G +I
Sbjct: 429 KKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNII- 487
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDP 114
TQP EE V++G+ VGY IRF ++TS +T+I + L +P
Sbjct: 488 CTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNP 547
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L S +I+DEAHER +HTDV+L ++K + N R
Sbjct: 548 TLEDISVLIIDEAHERALHTDVILPIVKDICNFR 581
Score = 275 (101.9 bits), Expect = 1.0e-83, Sum P(3) = 1.0e-83
Identities = 54/115 (46%), Positives = 79/115 (68%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
++++I SA+LDA S YF CA +V GR++ V+I YT+ E +Y+ A +ITI Q+H+
Sbjct: 584 IRVVISSATLDAEKISTYFNCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHIT 643
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
+ GDILVFL GQ EIE V++ ++ +L +L R LV +PI+SSLP E Q R+F
Sbjct: 644 QGKGDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 533 (192.7 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 117/276 (42%), Positives = 176/276 (63%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +ILD ++ + +NT +K+ + + K++I SA+LD SE+F ++V
Sbjct: 119 SVIILDEAHERS-LNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNV 177
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 278
G+ +PVEILY+ Y++++L +H+ E GDIL+F+TGQ++IE + ++E++
Sbjct: 178 PGKLYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKV 237
Query: 279 LQLPEAS-RKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVID 337
L E S + P+ SLP E Q+RVF+P R+ I++TNIAETS+T+ G+ YVID
Sbjct: 238 RSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
Query: 338 PGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDST 396
G+VK R Y+P GM SL V+ ISK QA QR+GRAGR PGKC+RLYP + D D+T
Sbjct: 298 SGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDAT 357
Query: 397 KPEIKRCNLSNVILQLKALGVDDI--IGFDFMEKPS 430
PEI+R +L+ +L LK+L + DI + FDF++ PS
Sbjct: 358 IPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPS 393
Score = 324 (119.1 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 67/149 (44%), Positives = 98/149 (65%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+LPI E+++VE V KN +++I+GETGSGK+TQL Q L G+ + G +I +TQP
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSG-VIAITQPRRVA 61
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAI 122
+E V LG+ VGY+IRF+DRT++ TRIK E+L +P L YS I
Sbjct: 62 AVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVI 121
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKS 151
I+DEAHER+++TD+LLGL+K++ R+ +
Sbjct: 122 ILDEAHERSLNTDILLGLVKRLVRIRASN 150
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 550 (198.7 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 115/248 (46%), Positives = 160/248 (64%)
Query: 192 LKLIIMSASLDARGFSEYF-----G-----CAKAVHVQGRQFPVEILYTLYPEPDYLDAT 241
L++I+ SA+LDA F ++F G A + V+GR PV + +T PDY +
Sbjct: 224 LRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSA 283
Query: 242 LITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQ 301
+ T+ +H E PGDILVFLTGQ+E+E V ++E L R L VP + +LP+ +
Sbjct: 284 VDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCDR-LWVVPCYGALPARE 342
Query: 302 QMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPIS 361
QM+ F G RKV++ATNIAE S+TIPGI YVID G+VK R G+E+L+ V +S
Sbjct: 343 QMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVS 402
Query: 362 KAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDII 421
KA A QR+GRAGR PGKC+RLYPE+EF++ + T PEI+RC +++ ILQLKALGV ++
Sbjct: 403 KASAEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKALGVQNVH 462
Query: 422 GFDFMEKP 429
F ++ P
Sbjct: 463 RFHYLSPP 470
Score = 304 (112.1 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 67/153 (43%), Positives = 90/153 (58%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR LPI ++ + +IIVGETG GK+TQ+PQFL AG+ DG+ I +T
Sbjct: 70 IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVIT 129
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE LG VGY++RFDD + T++K E L DP L
Sbjct: 130 QPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLL 189
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
S+YS I++DEAHER+ +TD+LLGLL+K+ R+
Sbjct: 190 SKYSIIMIDEAHERSCNTDILLGLLRKIIQIRN 222
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 526 (190.2 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 107/249 (42%), Positives = 160/249 (64%)
Query: 182 KQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDAT 241
K+ + +K A LK+++ SA++D F YF C K ++++GR +PV +++T DY+
Sbjct: 209 KERRKQKLANLKVVVTSATMDIDHFGNYFNC-KGMYLEGRTYPVRVMHTKEEHEDYIHTV 267
Query: 242 LITIFQVHLDEAPG-DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 300
L+T+F +H D+L+FLTGQEEIES+ + +++ + L +++ L
Sbjct: 268 LVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQG 327
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
+Q+ F P A RKVILATNIAETS+TIPGI+ VID GFVK + ++ V G++ L V I
Sbjct: 328 KQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRI 387
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
SKAQA QR+GRAGR+ G C+R Y + E D D+T+PEI R N ++++LQL AL +D
Sbjct: 388 SKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQPEILRTNPTSMVLQLLALDID-C 446
Query: 421 IGFDFMEKP 429
FDF++ P
Sbjct: 447 NNFDFLDPP 455
Score = 328 (120.5 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 68/157 (43%), Positives = 100/157 (63%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
R I QQ+KSLP+ + R+++E+ ND ++I+ ETGSGKTTQ+PQFL AG+ ++G +I
Sbjct: 58 RTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNG-MI 116
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G+TQP +E +G VGY++RF+D TS +T+I+ E++ D
Sbjct: 117 GITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKD 176
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
L +YS II+DEAHERTV+ D+L G++K Q R K
Sbjct: 177 RLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRK 213
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 546 (197.3 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 116/249 (46%), Positives = 164/249 (65%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYF---GCAKA---VHVQGRQFPVEILYTLYPEPDYLDA 240
RK + LKLII SA++DA FSE+F G + + ++GR PV Y P DY+
Sbjct: 188 RKRSSLKLIISSATIDASFFSEFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKE 247
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 300
T+ T++++H E PGDIL FLTGQEE+ L++E + + + K++ P++ S+ S
Sbjct: 248 TVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREYIASSEQENLKVL--PMYGSMSST 305
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
Q+ VF G RKV+LATNIAETS+TIPGI YVID G+VK + Y+P +SL++VP+
Sbjct: 306 DQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPV 365
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
SKA A+QR+GRAGR PGK +RLY +++++ L PE++R LS ILQLKALG+ +I
Sbjct: 366 SKASAIQRAGRAGRMRPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKALGIGNI 425
Query: 421 IGFDFMEKP 429
+ FDF P
Sbjct: 426 LRFDFPSPP 434
Score = 297 (109.6 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 64/153 (41%), Positives = 95/153 (62%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
+++QR+ LPI +++ + K+ ++I+VGETGSGK+TQ+PQ+L+ G+ G LIG+T
Sbjct: 40 LMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKG-LIGIT 98
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
+P +E G +G VGY +RF + S+ T+IK E L DP L
Sbjct: 99 EPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLL 158
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
++Y IIVDEAHER + TD++LGLLKK+ RS
Sbjct: 159 TQYGVIIVDEAHERNMLTDMILGLLKKILRKRS 191
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 670 (240.9 bits), Expect = 7.4e-82, Sum P(2) = 7.4e-82
Identities = 128/242 (52%), Positives = 180/242 (74%)
Query: 191 PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 250
PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ DYL A L+++FQ+H
Sbjct: 134 PLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIH- 192
Query: 251 DEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP 308
EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SLP QQ+RVF
Sbjct: 193 QEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQG 252
Query: 309 AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQR 368
A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V +SK QA QR
Sbjct: 253 APKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQR 312
Query: 369 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 428
+GRAGRE G C+RLY E+EF+K + T PEI+RCNL++V+LQL A+ V +++ FDFM K
Sbjct: 313 TGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSK 372
Query: 429 PS 430
PS
Sbjct: 373 PS 374
Score = 170 (64.9 bits), Expect = 7.4e-82, Sum P(2) = 7.4e-82
Identities = 36/69 (52%), Positives = 46/69 (66%)
Query: 91 VGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLL 141
VGY++RFDD TS TRIK EA+ D L +YS +I+DEAHERT+HTDVL G++
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 120
Query: 142 KKVQNARSK 150
K Q R +
Sbjct: 121 KAAQKRRKE 129
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 600 (216.3 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 129/265 (48%), Positives = 174/265 (65%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 226
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 158 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 215
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 284
I Y P PDY+ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 216 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 275
Query: 285 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 344
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK R
Sbjct: 276 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLR 335
Query: 345 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 404
Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E FDKL ST PE++R N
Sbjct: 336 AYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSN 395
Query: 405 LSNVILQLKALGVDDIIGFDFMEKP 429
L+ VILQLKALG+D+++ F FM P
Sbjct: 396 LAPVILQLKALGIDNVLRFHFMSPP 420
Score = 237 (88.5 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 53/116 (45%), Positives = 71/116 (61%)
Query: 45 QLPQF--LFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTS 102
+LP F L AG+ +G+++GVTQP EE G LG VGY IRFDD T
Sbjct: 53 KLPVFKYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTD 112
Query: 103 T-STRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+TRIK E ++DP L++YS I++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 113 QLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 168
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 521 (188.5 bits), Expect = 7.4e-81, Sum P(2) = 7.4e-81
Identities = 114/272 (41%), Positives = 172/272 (63%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 647 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFASFFGNVPIFHI 704
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 278
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 705 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 764
Query: 279 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 338
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 765 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 339 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 397
G+ K ++ P G L ++ I K Q +G +G P +C RLY ++ + ++L +T
Sbjct: 824 GYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP-RCCRLYTQSAYKNELLTTTV 882
Query: 398 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
PEI+R NL+NV+L LK+LGV D++ F FM+ P
Sbjct: 883 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPP 914
Score = 332 (121.9 bits), Expect = 7.4e-81, Sum P(2) = 7.4e-81
Identities = 76/156 (48%), Positives = 101/156 (64%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ IL+QR+ LPI +V++ L+ +R N I+I+VGETGSGKTTQL Q+L G+ G +I
Sbjct: 522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MI 580
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE G LG+ VGY+IRF+D TS ST IK E+L +
Sbjct: 581 GCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLRE 640
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
L YSAII+DEAHER+++TDVL GLL++V RS
Sbjct: 641 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRS 676
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 522 (188.8 bits), Expect = 6.9e-80, Sum P(2) = 6.9e-80
Identities = 113/274 (41%), Positives = 175/274 (63%)
Query: 165 SDMILDRGND----TNGI-NTLKQC--QGRKFAPLKLIIMSASLDARGFSEYFGCAKAVH 217
S +ILD ++ T+ I LKQ G++ LK+++MSA+L+A FS +FG A ++
Sbjct: 294 STIILDEAHERTILTDLIMGFLKQIITSGKR-KDLKIVVMSATLNAELFSNFFGNAPILY 352
Query: 218 VQGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQER 277
++G+ +PV Y D +D + +I Q++L+E GD+L FL GQEEI++ + +++
Sbjct: 353 IEGKMYPVSQFYLDAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEIDNCVKSLEQL 412
Query: 278 LLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVID 337
QLP + +V +P++++L QQ ++F G RKVILATNIAETS+T+ G+KYVID
Sbjct: 413 APQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVID 472
Query: 338 PGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTK 397
G K +++ G+ +LL PIS+A A QR+GRAGRE GK FRLYPE+ + L +
Sbjct: 473 SGLRKIKVWKHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYMALPKQQE 532
Query: 398 PEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
EIKR ++ +L LK LGVDD++ + ++E P +
Sbjct: 533 SEIKRNDIILPVLTLKKLGVDDLLNWSWLEYPGQ 566
Score = 310 (114.2 bits), Expect = 6.9e-80, Sum P(2) = 6.9e-80
Identities = 64/150 (42%), Positives = 95/150 (63%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
Q++LQ R+ LPI + +++E + N + I++GETGSGK+TQ+PQFL + K+IG
Sbjct: 173 QQLLQIREKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMP----ENPKMIG 228
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
VTQP EE G +LGQ VGY +RF + T+ T++K E +LD
Sbjct: 229 VTQPRRVAAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDS 288
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L++YS II+DEAHERT+ TD+++G LK++
Sbjct: 289 NLTKYSTIILDEAHERTILTDLIMGFLKQI 318
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 195/433 (45%), Positives = 258/433 (59%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 72
LPIA + L+ V N + ++VG+TGSGKTTQ+PQFL AG+C DGKLIGVTQP
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVTQPRRIAA 80
Query: 73 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKEALLDPYLSRYSAIIVDEAHERTV 132
EE G E+G+ VGYSIRF+D TS +TRIK L D L R + +VD R
Sbjct: 81 TTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIK-FLTDGLLIREA--LVDPLLSR-- 135
Query: 133 HTDVLLGLLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPL 192
++ V+ V A +S +D++L G+ LK+ + +K L
Sbjct: 136 YSIVM------VDEAHERSVS-----------TDILL-------GL--LKKIR-KKRPEL 168
Query: 193 KLIIMSASLDARGFSEYF----GCAKA------------VHVQGRQFPVEILYTLYPEPD 236
++II SA+L A F +F G ++ V ++GR +P++ILY P D
Sbjct: 169 RIIISSATLQAEQFLAFFSSTLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAED 228
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 296
YL + T+ VH +E GDILVFLTG++EIE+ V ER L R L+ +P+FS
Sbjct: 229 YLQRAVSTVLDVHENEPDGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSG 288
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
L +EQQM +F A A RKVI +TNIAE SVTI GI YV+D GFVK R Y+P G+E+L
Sbjct: 289 LSTEQQMYIFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLT 348
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 416
VPISKA A QR+GRAGR PGKCFRLY E + L D+ PE++R NL+ ILQLKALG
Sbjct: 349 AVPISKAAAAQRAGRAGRTKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKALG 408
Query: 417 VDDIIGFDFMEKP 429
+D+++ FDF+ P
Sbjct: 409 IDNVLHFDFLTPP 421
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 534 (193.0 bits), Expect = 4.3e-79, Sum P(2) = 4.3e-79
Identities = 116/251 (46%), Positives = 168/251 (66%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL- 250
LKLII SA+++A+ FS +FG A + GR FPV+ +YT P DY++A + ++HL
Sbjct: 499 LKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLA 558
Query: 251 -DEAPGDILVFLTGQEEIESVERLVQERLLQLP---------EASRKLVTVPIFSSLPSE 300
D + GDIL+F+TGQE+IE+ +QE+ LQ+ E + +PI+S+LP++
Sbjct: 559 NDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPAD 618
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
Q ++F RK+I+ATNIAETS+TI GI+YVID G+ K ++Y+P G++SL++ PI
Sbjct: 619 LQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPI 678
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGV-D 418
SKA A QRSGRAGR PG +RLY E+ F + + T PEI+R NLSN +L LK+L V D
Sbjct: 679 SKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTD 738
Query: 419 DIIGFDFMEKP 429
++ F F++KP
Sbjct: 739 ELSKFPFIDKP 749
Score = 299 (110.3 bits), Expect = 4.3e-79, Sum P(2) = 4.3e-79
Identities = 65/151 (43%), Positives = 91/151 (60%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD-GKL 61
+ I ++ LP+ +L+ +R+N +++I+GETGSGKTTQL Q+L+ G+ D GK
Sbjct: 340 KDDIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKS 399
Query: 62 IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT-STSTRIK---------EAL 111
I VTQP E V LG+ VGYSIRF+D T S T++K E L
Sbjct: 400 IVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETL 459
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLK 142
LD L +YS +I+DEAHER+++TD+LLG K
Sbjct: 460 LDDTLDKYSCVIIDEAHERSLNTDILLGFFK 490
Score = 48 (22.0 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 386 ENEFDKLEDSTKPEIKRCN--LSNVILQLK 413
E+ DK+ED I+RC +VI +LK
Sbjct: 1005 EHTLDKVEDDIDINIRRCKDMRDSVIQELK 1034
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 481 (174.4 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 110/263 (41%), Positives = 163/263 (61%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD--- 236
LK +G K PLK+++MSA+L+ S ++G + GR +PV E L D
Sbjct: 159 LKGSRGNK-TPLKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKES 217
Query: 237 --YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQER--LLQL-----PEASRK 287
Y+ + VH +EA GDILVFLTGQ EIE L+ E+ +L +
Sbjct: 218 SVYVKEVVKMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDG 277
Query: 288 LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYD 347
L+ + ++ S+P++QQ ++F PA G RK ++ATNIA TS+TI GI+Y++D GFVK ++
Sbjct: 278 LLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHN 337
Query: 348 PVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLS 406
G++ L VVPISK++A QR+GRAGR GKCFR+Y ++ +D + + T PEI+R +L+
Sbjct: 338 SRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLT 397
Query: 407 NVILQLKALGVDDIIGFDFMEKP 429
+VIL LK LGV D+I F +++ P
Sbjct: 398 SVILTLKCLGVHDVIRFPYLDCP 420
Score = 336 (123.3 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 72/144 (50%), Positives = 93/144 (64%)
Query: 9 QRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPX 68
+ K LPI + +LV+ V +N LI+ GETGSGKTTQLPQ+L+ AG R+G+ IGVTQP
Sbjct: 14 ESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNGR-IGVTQPR 72
Query: 69 XXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRY 119
E V LG+ VGY +RFDD ++ T IK E L DP L++Y
Sbjct: 73 RVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLTQY 132
Query: 120 SAIIVDEAHERTVHTDVLLGLLKK 143
S +I+DEAHER+++TDVLLGLLKK
Sbjct: 133 SIVILDEAHERSLNTDVLLGLLKK 156
Score = 42 (19.8 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 404 NLSNVILQLKALGVDDII 421
NL+ +L+ ALG +DI+
Sbjct: 459 NLTRALLKAAALGCEDIM 476
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 513 (185.6 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 114/250 (45%), Positives = 160/250 (64%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL- 250
LKLI+ SA+++A F+++FG A H+ GR FPVE+ + DY++ + + +HL
Sbjct: 512 LKLIVTSATMNANRFTKFFGVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLG 571
Query: 251 -------DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQM 303
+ GDILVF+TGQE+IE L++E+L L E L PI+S++P + Q
Sbjct: 572 RWNADNNNANDGDILVFMTGQEDIEITCDLIKEKL-NLLEDPPPLDIFPIYSTMPQDLQK 630
Query: 304 RVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 363
++F RKV++ATNIAETS+T+ GIKYVID G VK ++Y+P GM++L VVPIS A
Sbjct: 631 KIFNKTNLQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLA 690
Query: 364 QALQRSGRAGREGPGKCFRLYPEN--EFDKLEDSTKPEIKRCNLSNVILQLKALGVDDII 421
A QRSGRAGR G G +RLY E E D + PEI+R NLSN++L LK+L V+DI
Sbjct: 691 NADQRSGRAGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDIN 750
Query: 422 GFDFMEKPSR 431
F F++ P +
Sbjct: 751 SFPFLDPPPK 760
Score = 315 (115.9 bits), Expect = 1.7e-78, Sum P(2) = 1.7e-78
Identities = 73/157 (46%), Positives = 95/157 (60%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC----RDG 59
Q I QQRKSLP +V L+ +R N + I++GETGSGKTTQL QFL+ GF ++G
Sbjct: 349 QDIQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDKNG 408
Query: 60 --KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTS-TRIK-------- 108
++I TQP EE +LG+ VGYSIRF+D+T T IK
Sbjct: 409 EKRIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILL 468
Query: 109 -EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
E L DP L+ YS II+DEAHER+++TD+LLGL K +
Sbjct: 469 REILADPMLANYSCIIMDEAHERSLNTDILLGLFKNL 505
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 361 (132.1 bits), Expect = 3.2e-78, Sum P(3) = 3.2e-78
Identities = 76/141 (53%), Positives = 100/141 (70%)
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
PI+S L SEQQ ++F RK+I++TNIAETS+T+ GIKYVID G+ K ++Y+ G
Sbjct: 776 PIYSQLSSEQQSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIG 833
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVIL 410
M+ L V PIS+A A QRSGRAGR G G C+RLY EN F L + PEI+R NLSNV+L
Sbjct: 834 MDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVL 893
Query: 411 QLKALGVDDIIGFDFMEKPSR 431
LK+L V ++ FDF++ PS+
Sbjct: 894 LLKSLHVQNLFEFDFIDVPSK 914
Score = 311 (114.5 bits), Expect = 3.2e-78, Sum P(3) = 3.2e-78
Identities = 66/151 (43%), Positives = 98/151 (64%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++++L+ ++SLPI + L++ V N+I+IIVGETGSGKTTQ+ Q+L+ G+ R+G +I
Sbjct: 469 KEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNG-II 527
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
TQP E V++G VGY+IRF+D T+ T+I+ E L D
Sbjct: 528 CCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLND 587
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L +YS II+DEAHER+++TDVLLG+LK +
Sbjct: 588 KELDKYSVIIMDEAHERSINTDVLLGILKNI 618
Score = 183 (69.5 bits), Expect = 3.2e-78, Sum P(3) = 3.2e-78
Identities = 50/135 (37%), Positives = 77/135 (57%)
Query: 165 SDMILDRGNDTNGINT------LKQ-CQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVH 217
S +I+D ++ + INT LK C R LKLI+ SA++DA+ FS +FG A +
Sbjct: 594 SVIIMDEAHERS-INTDVLLGILKNICLKRN--DLKLIVTSATIDAKKFSAFFGNAPIYN 650
Query: 218 VQGRQFPVEILYTLYPEPDYLDATLITIFQVHL-----DEAPGDILVFLTGQEEIESVER 272
+QGR F V I Y P DY++ + Q+H+ D GDIL+F+TGQE+I +
Sbjct: 651 IQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCY 710
Query: 273 LVQERLLQLPEASRK 287
L+ ER ++ E+ ++
Sbjct: 711 LLSERFYEVYESYKE 725
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 361 (132.1 bits), Expect = 3.2e-78, Sum P(3) = 3.2e-78
Identities = 76/141 (53%), Positives = 100/141 (70%)
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
PI+S L SEQQ ++F RK+I++TNIAETS+T+ GIKYVID G+ K ++Y+ G
Sbjct: 776 PIYSQLSSEQQSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIG 833
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVIL 410
M+ L V PIS+A A QRSGRAGR G G C+RLY EN F L + PEI+R NLSNV+L
Sbjct: 834 MDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVL 893
Query: 411 QLKALGVDDIIGFDFMEKPSR 431
LK+L V ++ FDF++ PS+
Sbjct: 894 LLKSLHVQNLFEFDFIDVPSK 914
Score = 311 (114.5 bits), Expect = 3.2e-78, Sum P(3) = 3.2e-78
Identities = 66/151 (43%), Positives = 98/151 (64%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++++L+ ++SLPI + L++ V N+I+IIVGETGSGKTTQ+ Q+L+ G+ R+G +I
Sbjct: 469 KEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNG-II 527
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
TQP E V++G VGY+IRF+D T+ T+I+ E L D
Sbjct: 528 CCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLND 587
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L +YS II+DEAHER+++TDVLLG+LK +
Sbjct: 588 KELDKYSVIIMDEAHERSINTDVLLGILKNI 618
Score = 183 (69.5 bits), Expect = 3.2e-78, Sum P(3) = 3.2e-78
Identities = 50/135 (37%), Positives = 77/135 (57%)
Query: 165 SDMILDRGNDTNGINT------LKQ-CQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVH 217
S +I+D ++ + INT LK C R LKLI+ SA++DA+ FS +FG A +
Sbjct: 594 SVIIMDEAHERS-INTDVLLGILKNICLKRN--DLKLIVTSATIDAKKFSAFFGNAPIYN 650
Query: 218 VQGRQFPVEILYTLYPEPDYLDATLITIFQVHL-----DEAPGDILVFLTGQEEIESVER 272
+QGR F V I Y P DY++ + Q+H+ D GDIL+F+TGQE+I +
Sbjct: 651 IQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCY 710
Query: 273 LVQERLLQLPEASRK 287
L+ ER ++ E+ ++
Sbjct: 711 LLSERFYEVYESYKE 725
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 522 (188.8 bits), Expect = 1.6e-77, Sum P(2) = 1.6e-77
Identities = 117/247 (47%), Positives = 154/247 (62%)
Query: 181 LKQCQGRKFA---PLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT------L 231
L+QCQ ++ PL+LIIMSA+L A F YF AK V V GR FP+E+ +
Sbjct: 297 LRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKS 356
Query: 232 YPEPDYLDATLITIFQVHLDEAPG-DILVFLTGQEEIESVERLVQERLLQLPEASRKLVT 290
+ DY+ +I + VHL E G DILVFLTG EEIE+V + E LP ++ L+
Sbjct: 357 FSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMP 416
Query: 291 VPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVK 350
VP++++L E+Q F G RKVI++TNIAETSVTIPGI+ VID G VK + ++
Sbjct: 417 VPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFN 476
Query: 351 GMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVIL 410
++ L V +SKAQA QR+GRAGR+ PGKC+RLY +F K E PEI RCNLS L
Sbjct: 477 RIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDFHKFEAENMPEILRCNLSATFL 536
Query: 411 QLKALGV 417
+L LG+
Sbjct: 537 ELMKLGM 543
Score = 289 (106.8 bits), Expect = 1.6e-77, Sum P(2) = 1.6e-77
Identities = 60/151 (39%), Positives = 91/151 (60%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXX 69
R LPI +VE++L+ E+ + LI++GETGSGK+TQ+PQ AG G I VTQP
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGS-IAVTQPRR 216
Query: 70 XXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDPYLSRYS 120
E G +G VGY +RF++ T T+I ++AL+ P L +YS
Sbjct: 217 VAAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYS 276
Query: 121 AIIVDEAHERTVHTDVLLGLLKKVQNARSKS 151
+I+DEAHER++H+DVL+ +L++ Q+ R ++
Sbjct: 277 CVIIDEAHERSLHSDVLMCILRQCQDQRRET 307
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 506 (183.2 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 102/239 (42%), Positives = 156/239 (65%)
Query: 193 KLIIMSASLDARGFSEYFGCAKA--VHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHL 250
+L++ SAS+DA S++FG K + ++G+ FPVE L+ P +Y+D+ + T+ ++
Sbjct: 173 RLVLSSASVDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENYVDSAIETVININS 232
Query: 251 DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAA 310
PGDILVFL+G++EIE + +++ L+ E + LV +P+ + L ++QMRVF
Sbjct: 233 TYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYD 292
Query: 311 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 370
FRKVI +TNIAETS+TI GI YV+D GF K R+Y+P L+ VPISK+ A+QRSG
Sbjct: 293 GDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSG 352
Query: 371 RAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
RAGR GK FRLY E + +++ + +I C++S ++L LK LG+ +I+ F F +P
Sbjct: 353 RAGRTMRGKVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRP 411
Score = 290 (107.1 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 63/150 (42%), Positives = 83/150 (55%)
Query: 9 QRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPX 68
Q+K LPI +L+ V +N I I++G TG GKTTQ+PQFL+ AG+ +IG TQP
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPR 80
Query: 69 XXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRY 119
E G GYSI+FD S T+IK E DP L RY
Sbjct: 81 RLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERY 140
Query: 120 SAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
S +I+DE HERT+ TD+LLG+LK++ R+
Sbjct: 141 SIVILDEVHERTLSTDLLLGVLKRILEKRN 170
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 505 (182.8 bits), Expect = 2.4e-76, Sum P(2) = 2.4e-76
Identities = 106/242 (43%), Positives = 158/242 (65%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
L++I+MSA+L A FSE+F A + V+GR+F V+ Y P D +DA + Q++
Sbjct: 230 LRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQG 289
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLP-EASRKLVT-VPIFSSLPSEQQMRVFAPA 309
E GDIL FL GQEEI+ ++++ + EA L+ P++++LP+ QQ VFAP
Sbjct: 290 EELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPI 349
Query: 310 AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRS 369
RKV+ +TNIAETSVTI G+K+V+D G K +++ G+ +LL VPIS+A A+QRS
Sbjct: 350 KGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRS 409
Query: 370 GRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
GRAGRE GK FRLY E+++ KL ++PEI R ++++ +L LK GVDD++ + + E P
Sbjct: 410 GRAGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENP 469
Query: 430 SR 431
+
Sbjct: 470 GK 471
Score = 286 (105.7 bits), Expect = 2.4e-76, Sum P(2) = 2.4e-76
Identities = 59/154 (38%), Positives = 94/154 (61%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF-CRDGKLIGV 64
+L+ R++LP+ ++ ++ + N + +++GETGSGK+TQ+PQF+ + + I V
Sbjct: 74 LLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAV 133
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPY 115
TQP +E G +LG++VGYS+RFD+ T+T TR+K E +++
Sbjct: 134 TQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSD 193
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKK-VQNAR 148
L YS I++DEAHERTV TD++LG LK +Q R
Sbjct: 194 LREYSVIVIDEAHERTVLTDLILGFLKSLIQGPR 227
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 528 (190.9 bits), Expect = 3.2e-76, Sum P(3) = 3.2e-76
Identities = 116/260 (44%), Positives = 158/260 (60%)
Query: 186 GRKFAPLKLIIMSASLDARGFSEYFGC------AKA---------VHVQGRQFPVEILYT 230
GR PLK++ MSA+ + +F AKA + ++GRQFPVEI+++
Sbjct: 295 GRGGLPLKVVAMSATANIETLENFFSIPQDDRKAKAESDGKAEQTLKIEGRQFPVEIIHS 354
Query: 231 LYPEPDYLDATLITIFQVHLDEA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLV 289
P P D + T+F++H E PGDILVFL GQE IE ++RL++E L K+
Sbjct: 355 PKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIEEYAATLASDVPKIK 414
Query: 290 TVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPV 349
+P+F L E Q F P RKV+LATNIAETSVT+PG++YVID G K + Y
Sbjct: 415 ALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYVIDTGKSKMKQYRAS 474
Query: 350 KGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVI 409
G+ESLLV ISK+ A+QR+GRAGRE PGKC+RLY E+ + ++ D+ PEI R N+
Sbjct: 475 LGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYKEMRDADLPEILRNNVREAA 534
Query: 410 LQLKALGVDDIIGFDFMEKP 429
L + A GVDD++ F M+ P
Sbjct: 535 LIMMARGVDDLLTFPLMDTP 554
Score = 151 (58.2 bits), Expect = 3.2e-76, Sum P(3) = 3.2e-76
Identities = 32/62 (51%), Positives = 45/62 (72%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
+L RK+LPI + + E +RKND+LI+VGETGSGK+TQ+PQFL +CR ++I +T
Sbjct: 110 LLPLRKALPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFLADEEWCRPRQVI-MT 168
Query: 66 QP 67
P
Sbjct: 169 LP 170
Score = 132 (51.5 bits), Expect = 3.2e-76, Sum P(3) = 3.2e-76
Identities = 31/73 (42%), Positives = 41/73 (56%)
Query: 91 VGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLL 141
VGYS+RFD T+IK E L DP L +YSA++VDE HER + D+L G L
Sbjct: 225 VGYSVRFDHNVPKGTKIKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFL 284
Query: 142 KKVQNARSKSADG 154
K++ + K G
Sbjct: 285 KQMLLSPDKPGRG 297
Score = 60 (26.2 bits), Expect = 1.1e-68, Sum P(3) = 1.1e-68
Identities = 20/63 (31%), Positives = 25/63 (39%)
Query: 59 GKLIGVTQPXXXXXXXXXXXXXEESGVEL------GQR-------VGYSIRFDDRTSTST 105
G +I VTQP E+G L G + VGYS+RFD T
Sbjct: 180 GGMIAVTQPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKGT 239
Query: 106 RIK 108
+IK
Sbjct: 240 KIK 242
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 469 (170.2 bits), Expect = 1.5e-75, Sum P(2) = 1.5e-75
Identities = 106/253 (41%), Positives = 160/253 (63%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 245
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 246 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 298
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 417
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 418 DDIIGFDFMEKPS 430
D+I F +++ P+
Sbjct: 444 HDVIRFPYLDPPN 456
Score = 323 (118.8 bits), Expect = 1.5e-75, Sum P(2) = 1.5e-75
Identities = 71/153 (46%), Positives = 93/153 (60%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 122
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 155
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 469 (170.2 bits), Expect = 1.5e-75, Sum P(2) = 1.5e-75
Identities = 106/253 (41%), Positives = 160/253 (63%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 245
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 246 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 298
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 417
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 418 DDIIGFDFMEKPS 430
D+I F +++ P+
Sbjct: 444 HDVIRFPYLDPPN 456
Score = 323 (118.8 bits), Expect = 1.5e-75, Sum P(2) = 1.5e-75
Identities = 71/153 (46%), Positives = 93/153 (60%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 122
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 155
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 469 (170.2 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 106/253 (41%), Positives = 160/253 (63%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 245
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 246 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 298
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 417
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 418 DDIIGFDFMEKPS 430
D+I F +++ P+
Sbjct: 444 HDVIRFPYLDPPN 456
Score = 323 (118.8 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 71/153 (46%), Positives = 93/153 (60%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 122
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 155
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 467 (169.5 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 106/253 (41%), Positives = 158/253 (62%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 245
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 246 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 298
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 417
PISK++ALQRSGRAGR GKCFR+Y + + + + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 418 DDIIGFDFMEKPS 430
D+I F +++ P+
Sbjct: 444 HDVIRFPYLDPPN 456
Score = 325 (119.5 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 72/153 (47%), Positives = 93/153 (60%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 122
EE LG +VGY +RFDD +S T IK LL DP LS++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVI 170
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 155
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEH 203
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 469 (170.2 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 106/253 (41%), Positives = 160/253 (63%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 245
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 246 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 298
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 417
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 418 DDIIGFDFMEKPS 430
D+I F +++ P+
Sbjct: 444 HDVIRFPYLDPPN 456
Score = 322 (118.4 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
Identities = 71/153 (46%), Positives = 93/153 (60%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 122
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVI 170
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 155
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEH 203
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 469 (170.2 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 106/253 (41%), Positives = 160/253 (63%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 245
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 204 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 263
Query: 246 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 298
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 264 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 323
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 324 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 383
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 417
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 384 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 443
Query: 418 DDIIGFDFMEKPS 430
D+I F +++ P+
Sbjct: 444 HDVIRFPYLDPPN 456
Score = 321 (118.1 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 70/153 (45%), Positives = 93/153 (60%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+ PI K++++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 122
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 155
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 203
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 469 (170.2 bits), Expect = 3.7e-75, Sum P(2) = 3.7e-75
Identities = 106/253 (41%), Positives = 160/253 (63%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 245
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 282 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 341
Query: 246 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 298
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 342 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 401
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 402 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 461
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 417
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 462 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 521
Query: 418 DDIIGFDFMEKPS 430
D+I F +++ P+
Sbjct: 522 HDVIRFPYLDPPN 534
Score = 323 (118.8 bits), Expect = 3.7e-75, Sum P(2) = 3.7e-75
Identities = 71/153 (46%), Positives = 93/153 (60%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 130 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 188
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 122
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 189 AISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 248
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 155
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 249 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 281
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 655 (235.6 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 126/244 (51%), Positives = 177/244 (72%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK+++ SA++D FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 60 RFRPELKVLVASATMDTARFSTFFDGAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 119
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 120 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 179
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 180 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 239
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 240 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 299
Query: 426 MEKP 429
++ P
Sbjct: 300 LDPP 303
Score = 99 (39.9 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
S+ ++VDEAHERT+HTD+L GL+K V R
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFR 62
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 655 (235.6 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 126/244 (51%), Positives = 177/244 (72%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK+++ SA++D FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 60 RFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 119
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 120 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 179
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GMESL V P SKA A
Sbjct: 180 QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN 239
Query: 367 QRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDF 425
QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L LK+LG+ D++ FDF
Sbjct: 240 QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF 299
Query: 426 MEKP 429
++ P
Sbjct: 300 LDPP 303
Score = 99 (39.9 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
S+ ++VDEAHERT+HTD+L GL+K V R
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFR 62
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 361 (132.1 bits), Expect = 1.3e-71, Sum P(3) = 1.3e-71
Identities = 75/170 (44%), Positives = 109/170 (64%)
Query: 263 GQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNI 322
G++E + E +E L + A+ L +P++S LP+++QMRVF G R I+ATN+
Sbjct: 704 GEDEEDEEEEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNV 763
Query: 323 AETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFR 382
AETS+TIPG++YV+D G K R Y+ G++S V +SKA A QRSGRAGR GPG C+R
Sbjct: 764 AETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYR 823
Query: 383 LYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
LY F+ E +KPEI R + +++LQ+K++ + +II F F P R
Sbjct: 824 LYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDR 873
Score = 295 (108.9 bits), Expect = 1.3e-71, Sum P(3) = 1.3e-71
Identities = 64/160 (40%), Positives = 94/160 (58%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF-CRDGK--- 60
+I + R LP+ E +++E + ND++II GETGSGKTTQ+PQFL+ AGF D
Sbjct: 383 EIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYP 442
Query: 61 -LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EA 110
++G+TQP E G + G +VGY IRFD T++K E
Sbjct: 443 GMVGITQPRRVAAVSMAERVANELG-DHGHKVGYQIRFDSTAKEDTKVKFMTDGVLLREM 501
Query: 111 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
+ D L++YS+II+DEAHER ++TD+L+G+L + R+K
Sbjct: 502 MHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAK 541
Score = 138 (53.6 bits), Expect = 1.3e-71, Sum P(3) = 1.3e-71
Identities = 41/90 (45%), Positives = 49/90 (54%)
Query: 192 LKLIIMSASLDARGFSE---YFGCAKAV-HVQGRQFPVEILYTLYPEPDYLDATLITIFQ 247
LKLIIMSA+L FSE F A V V RQFPV I + +Y D +
Sbjct: 553 LKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCK 612
Query: 248 VHLDEAPGDILVFLTGQEEI-ESVERLVQE 276
+H PG ILVFLTGQ+EI V+RL +E
Sbjct: 613 IHQKLPPGAILVFLTGQQEITHMVKRLRKE 642
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 351 (128.6 bits), Expect = 2.9e-70, Sum P(3) = 2.9e-70
Identities = 73/168 (43%), Positives = 107/168 (63%)
Query: 265 EEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAE 324
+E E E ++E + ++ +P++S LP+++Q+RVF P G R V+LATN+AE
Sbjct: 654 DENEEEEFKIEEE--EAGTGPSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAE 711
Query: 325 TSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLY 384
TS+TIPGI+YV D G K R YD + G++S V ISKA A QR GRAGR GPG C+RLY
Sbjct: 712 TSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLY 771
Query: 385 PENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
+++ L++ PE+ R +L V+LQLK++ + ++ F F P R
Sbjct: 772 SSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPER 819
Score = 299 (110.3 bits), Expect = 2.9e-70, Sum P(3) = 2.9e-70
Identities = 66/161 (40%), Positives = 97/161 (60%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF-CRDGK--- 60
+I R +LP+ S E+R++E + N+I+++ G TGSGKTTQ+PQFLF AG+ D
Sbjct: 349 EIQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPG 408
Query: 61 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EAL 111
+IG+TQP EE G + Q+VGY IRF+ + T +K E
Sbjct: 409 MIGITQPRRVAAVSMSKRVAEELG-DHSQKVGYQIRFEGTVNKDTAVKFMTDGVLLREVA 467
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSA 152
D L +YSAI+VDEAHER+V+TD+L+G+L ++ R++ A
Sbjct: 468 QDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMA 508
Score = 130 (50.8 bits), Expect = 2.9e-70, Sum P(3) = 2.9e-70
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 191 PLKLIIMSASLDARGFSE---YFGCAKAV-HVQGRQFPVEILYTLYPEPDYLDATLITIF 246
PLKL+IMSA+L +E F V V+GRQ+PV + + DY++ I
Sbjct: 516 PLKLVIMSATLRIEDLTENKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKIS 575
Query: 247 QVHLDEAPGDILVFLTGQEEIESVER 272
+ H PG +LVFLTGQ EI + +
Sbjct: 576 RGHKKLPPGGMLVFLTGQNEITQLSK 601
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 349 (127.9 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 73/149 (48%), Positives = 96/149 (64%)
Query: 282 PEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 341
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 576 PDASLPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 635
Query: 342 KARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK 401
K R YD V G+ S V +S+A A QR+GRAGR PG C+RLY F E PEI
Sbjct: 636 KKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQFPPPEIT 695
Query: 402 RCNLSNVILQLKALGVDDIIGFDFMEKPS 430
R + ++ILQ+KAL ++ +I F F PS
Sbjct: 696 RRPVEDLILQMKALNIEKVINFPFPTPPS 724
Score = 291 (107.5 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 62/153 (40%), Positives = 96/153 (62%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQP 67
++R LPI + E+ ++E V ++ I+I+ GETGSGKTTQ+PQFL+ AG+ D +IG+T+P
Sbjct: 241 EERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGITEP 300
Query: 68 XXXXXXXXXXXXXEESGVELGQRV-GYSIRFDDRTSTSTRIK---EALL------DPYLS 117
+E + L QRV Y IR++ + TRIK + +L D L
Sbjct: 301 RRVAAVAMSQRVAKE--MNLSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLL 358
Query: 118 RYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
RY +++DEAHER+V+TD+L+GLL ++ + R+K
Sbjct: 359 RYKVVLIDEAHERSVYTDILIGLLSRIVSLRAK 391
Score = 118 (46.6 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 31/100 (31%), Positives = 52/100 (52%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY- 232
++ + + ++ PLKL+IMSA+L F++ + + V+ RQFPV + +
Sbjct: 382 LSRIVSLRAKRHLPLKLLIMSATLRVEDFTQNQRLFPQPPPVIKVESRQFPVTVHFNKRT 441
Query: 233 PEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVER 272
P DY + ++H G ILVFLTGQ E+ ++ R
Sbjct: 442 PLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCR 481
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 338 (124.0 bits), Expect = 6.8e-68, Sum P(3) = 6.8e-68
Identities = 69/147 (46%), Positives = 95/147 (64%)
Query: 283 EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 342
++S L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G VK
Sbjct: 572 DSSLPLYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVK 631
Query: 343 ARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKR 402
R YD + G+ S V IS+A A QR+GRAGR PG C+RLY F E + PEI +
Sbjct: 632 KRFYDKITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMDFEKFSAPEITK 691
Query: 403 CNLSNVILQLKALGVDDIIGFDFMEKP 429
+ ++ILQ+KAL ++ +I F F P
Sbjct: 692 RPVEDLILQMKALNIEKVINFPFPTPP 718
Score = 284 (105.0 bits), Expect = 6.8e-68, Sum P(3) = 6.8e-68
Identities = 62/156 (39%), Positives = 93/156 (59%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
+I + R LPI + E+ ++E + +N I++I GETGSGKTTQ+PQFL+ AG+ +IG+
Sbjct: 234 EIQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGI 293
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRV-GYSIRFDDRTSTSTRIK---------EALLDP 114
T+P +E + L RV Y IR++ T+ T+IK E D
Sbjct: 294 TEPRRVAAVSMSQRVAKE--MNLSHRVVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDF 351
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
LS+Y II+DEAHER+++TD+L+GLL ++ R K
Sbjct: 352 LLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREK 387
Score = 135 (52.6 bits), Expect = 6.8e-68, Sum P(3) = 6.8e-68
Identities = 36/95 (37%), Positives = 51/95 (53%)
Query: 187 RKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLDAT 241
+K PLKLIIMSA+L F+E + G + V RQFPV + + P DY
Sbjct: 387 KKGLPLKLIIMSATLRVEDFTENTRLFAGTPPVLQVDARQFPVTVHFNKKTPLDDYSGEC 446
Query: 242 LITIFQVHLDEAPGDILVFLTGQEEIESVERLVQE 276
+ ++H G ILVFLTGQ E+ S+ R +++
Sbjct: 447 FRKVCKIHRMLPSGGILVFLTGQAEVHSLCRRLRK 481
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 351 (128.6 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 73/149 (48%), Positives = 96/149 (64%)
Query: 282 PEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 341
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 575 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKV 634
Query: 342 KARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK 401
K R YD V G+ S V +S+A A QR+GRAGR PG C+RLY F E PEI
Sbjct: 635 KKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEIT 694
Query: 402 RCNLSNVILQLKALGVDDIIGFDFMEKPS 430
R + ++ILQ+KAL ++ +I F F PS
Sbjct: 695 RRPVEDLILQMKALNIEKVINFPFPTPPS 723
Score = 282 (104.3 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 62/153 (40%), Positives = 94/153 (61%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQP 67
++R LPI + E+ ++E V ++ I+I+ GETGSGKTTQ+PQFL+ AG+ + +IGVT+P
Sbjct: 243 EERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVTEP 302
Query: 68 XXXXXXXXXXXXXEESGVELGQRV-GYSIRFDDRTSTSTRIK---EALL------DPYLS 117
+E + L RV Y IR++ + TRIK + +L D L
Sbjct: 303 RRVAAVAMSQRVAKE--MNLSHRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLL 360
Query: 118 RYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
+Y +I+DEAHER+V+TD+LLGLL ++ R+K
Sbjct: 361 KYKVVIIDEAHERSVYTDILLGLLSRIVALRAK 393
Score = 120 (47.3 bits), Expect = 1.7e-67, Sum P(3) = 1.7e-67
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 185 QGRKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLD 239
+ ++ PLKL+IMSA+L F++ + + V+ RQFPV + + P DY
Sbjct: 391 RAKRHLPLKLLIMSATLRVEDFTQNQRLFTTPPPVIKVESRQFPVTVHFNKRTPLDDYSG 450
Query: 240 ATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQE 276
+ ++H G ILVFLTGQ E+ ++ R +++
Sbjct: 451 ECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRLRK 487
Score = 44 (20.5 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 171 RGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCA 213
+G T + +K+ + A LKL + L A G EY GC+
Sbjct: 823 KGRRTR-VAQMKRTWAGQGASLKLGDLMVLLGAVGACEYAGCS 864
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 347 (127.2 bits), Expect = 5.9e-67, Sum P(3) = 5.9e-67
Identities = 73/149 (48%), Positives = 96/149 (64%)
Query: 282 PEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 341
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 580 PDASLPLHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 639
Query: 342 KARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK 401
K R YD V G+ S V +S+A A QR+GRAGR PG C+RLY F E PEI
Sbjct: 640 KKRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYPPPEIT 699
Query: 402 RCNLSNVILQLKALGVDDIIGFDFMEKPS 430
R + ++ILQ+KAL ++ +I F F PS
Sbjct: 700 RRPVEDLILQMKALNIEKVINFPFPTPPS 728
Score = 283 (104.7 bits), Expect = 5.9e-67, Sum P(3) = 5.9e-67
Identities = 64/153 (41%), Positives = 93/153 (60%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQP 67
++R LPI S E+ ++E V ++ I+II GETGSGKTTQ+PQFL+ AG+ D +IGVT+P
Sbjct: 245 EERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVTEP 304
Query: 68 XXXXXXXXXXXXXEESGVELGQRV-GYSIRFDDRTSTSTRIK---EALL------DPYLS 117
+E + L RV Y IR++ + TRIK + +L D L
Sbjct: 305 RRVAAVAMSQRVAKE--MNLSPRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLL 362
Query: 118 RYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
+Y +I+DEAHER+V+TD+L+GLL ++ R K
Sbjct: 363 KYKVVIIDEAHERSVYTDILIGLLSRIVCLREK 395
Score = 118 (46.6 bits), Expect = 5.9e-67, Sum P(3) = 5.9e-67
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 187 RKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLDAT 241
++ PLKL+IMSA+L F++ + + V+ RQFPV + + P DY
Sbjct: 395 KRHLPLKLLIMSATLRVEDFTQNQRLFTQPPPVIKVESRQFPVTVHFNKRTPLEDYSGEC 454
Query: 242 LITIFQVHLDEAPGDILVFLTGQEEIESVER 272
+ ++H G ILVFLTGQ E+ ++ R
Sbjct: 455 FRKVCKIHRMLPAGGILVFLTGQAEVHALCR 485
Score = 42 (19.8 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCA 213
+K+ + A LKL + L A G EY GC+
Sbjct: 837 MKRIWAGQGASLKLGDLMVLLGAVGACEYAGCS 869
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 389 (142.0 bits), Expect = 9.4e-67, Sum P(2) = 9.4e-67
Identities = 101/279 (36%), Positives = 152/279 (54%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR--DGK---LIGV 64
R +LPI E +VE+++ ND++II GETGSGKTTQ+PQFL+ +GF G +IGV
Sbjct: 402 RDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGV 461
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST-RIK---------EALLDP 114
TQP EE VE G+ VGY IR+D + +S +IK E D
Sbjct: 462 TQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDF 521
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXXXXXXXXSDMILDRGND 174
LS+YS+I++DEAHER ++TD+L+GLL ++ R K + ++ N
Sbjct: 522 LLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKK-----------LYLKSLATNKANG 570
Query: 175 TNGINTLKQCQGRKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYT 230
T G++ + PLKL++MSA+L F++ + +++ RQFPV I +
Sbjct: 571 TIGVDMIY--------PLKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFN 622
Query: 231 LYPE-PDYLDATLITIFQVHLDEAPGDILVFLTGQEEIE 268
E +Y+D + ++H + G ILVF+TG++EIE
Sbjct: 623 KKTELVNYIDECYKKVVKIHKNLPSGGILVFVTGKQEIE 661
Score = 335 (123.0 bits), Expect = 9.4e-67, Sum P(2) = 9.4e-67
Identities = 69/143 (48%), Positives = 93/143 (65%)
Query: 288 LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYD 347
L +P++S+LP+ +QMRVF G R V++ATN+AETS+TIP IKYV+D G VK R Y+
Sbjct: 846 LFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYN 905
Query: 348 PVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLS 406
G+ S V SKA A QR+GRAGR GPG C+R+Y F D + +KPEI +
Sbjct: 906 KDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFSKPEILMIPID 965
Query: 407 NVILQLKALGVDDIIGFDFMEKP 429
+ILQ+K++G+ I GF F P
Sbjct: 966 GMILQMKSMGIQKITGFPFPTPP 988
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 165/441 (37%), Positives = 245/441 (55%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR SLPI K ++ + K L+I+G TG GK+TQ+PQ+LF +G+ + I T
Sbjct: 48 IQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILCT 107
Query: 66 QPXXXXXXXXXXXXXEESGVE-LGQRVGYSIRFDDRTST-STRIK---------EALLDP 114
QP +E G + +G+ VGYS+RFD++ S TRIK E +LDP
Sbjct: 108 QPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDP 167
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXXXXXXXXSDMILDRGND 174
L +YS I++DEAHER++ TD+L+GLLKKVQ R+ + + ++ ND
Sbjct: 168 LLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNAND 227
Query: 175 TNGINTLKQCQGRKFAPLKLIIMSASLDARGFS---EYFGCAKAVHVQGRQFPVEILYTL 231
Q K I+ S++ R + Y + + ++Q + ++T
Sbjct: 228 FFNFFNYNQTND-KSKDTSTIL---SIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTT 283
Query: 232 YPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 291
P D L +F +E + L+ T ++ E + + Q+ Q + K +
Sbjct: 284 QPPGDIL------VFLTGQEEI--EKLI-QTLDDKFEILRQYHQQHHHQQQQPFMKYSLL 334
Query: 292 PIFSSLPSEQQMRVFAPAAAG--FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPV 349
P++S L +Q++VF RK+I++TNIAETS+TI G+ YV+D GFVK + YD
Sbjct: 335 PMYSGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDSE 394
Query: 350 KGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKL-EDSTKPEIKRCNLSNV 408
G+ESL++VP SK+ A QR+GRAGR GKC+RLY E ++KL D T PEI+R NL+N
Sbjct: 395 SGLESLVIVPTSKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNT 454
Query: 409 ILQLKALGVDDIIGFDFMEKP 429
ILQLKALG+D+I+ FDF+ +P
Sbjct: 455 ILQLKALGIDNILNFDFISQP 475
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 314 (115.6 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 62/145 (42%), Positives = 96/145 (66%)
Query: 288 LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYD 347
L +P++S L SE+Q R+F P G R +++TN+AETS+TIP IKYV+D G K RLYD
Sbjct: 617 LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYD 676
Query: 348 PVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLS 406
+ G+ + +V SKA A QR+GRAGR G C+RLY + D ED ++P+I++ +
Sbjct: 677 KLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVE 736
Query: 407 NVILQLKALGVDDIIGFDFMEKPSR 431
+++LQ++ +G+D ++ F F P +
Sbjct: 737 DLMLQMRCMGIDRVVHFPFPSPPDQ 761
Score = 289 (106.8 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 65/155 (41%), Positives = 96/155 (61%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
++ R LPI + E++++E + +N I+I+ GETGSGKTTQLPQFL+ AG+ + K+IGV
Sbjct: 252 EVQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQH-KMIGV 310
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPY 115
T+P E + + V Y IRF+ + +TRIK + +L D
Sbjct: 311 TEPRRVAAIAMSKRVAHEMNLPESE-VSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFL 369
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
LS+YS II+DEAHER+V+TD+L+GLL ++ R K
Sbjct: 370 LSKYSVIILDEAHERSVYTDILVGLLSRIVPLRHK 404
Score = 123 (48.4 bits), Expect = 1.7e-64, Sum P(3) = 1.7e-64
Identities = 32/86 (37%), Positives = 45/86 (52%)
Query: 191 PLKLIIMSASLDARGFSEYFGCAKA----VHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
PLKLIIMSA+L F+E K + V+ RQFPV I + DY+
Sbjct: 408 PLKLIIMSATLRVSDFTENTRLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTL 467
Query: 247 QVHLDEAPGDILVFLTGQEEIESVER 272
++H G IL+F+TGQ+E+ + R
Sbjct: 468 KIHNKLPEGGILIFVTGQQEVNQLVR 493
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 344 (126.2 bits), Expect = 1.2e-63, Sum P(5) = 1.2e-63
Identities = 68/151 (45%), Positives = 101/151 (66%)
Query: 281 LPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 340
+P+ + + ++SSLP+++Q +F P RKVIL+TNIAETSVTIP IKYVID G
Sbjct: 393 MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGK 452
Query: 341 VKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEI 400
VK + +D +G L V ISK A+QRSGRAGRE PG+ +R+Y + E++ + PEI
Sbjct: 453 VKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEI 512
Query: 401 KRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
R +L+ + L+LKA+ +++ + F+F E P +
Sbjct: 513 FRSDLTQIYLELKAMNINNPLEFNFPENPRK 543
Score = 136 (52.9 bits), Expect = 1.2e-63, Sum P(5) = 1.2e-63
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 86 ELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDV 136
++G VGY+IRF + S TRIK E + DP L +Y +I+DE HER++ TDV
Sbjct: 97 DIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDV 156
Query: 137 LLGLLKKVQNARSK 150
LLG K + R K
Sbjct: 157 LLGYTKILLQKRKK 170
Score = 102 (41.0 bits), Expect = 1.2e-63, Sum P(5) = 1.2e-63
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 11 KSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFL 50
+ LPI + + + ++KN+++II GETG GKTTQ+PQ +
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQII 41
Score = 83 (34.3 bits), Expect = 1.2e-63, Sum P(5) = 1.2e-63
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 251 DEAPGDILVFLTGQEEIESVERLVQERL 278
D++ GDILVFL GQEEIE V +++E+L
Sbjct: 313 DKSLGDILVFLPGQEEIEMVNIMLKEKL 340
Score = 79 (32.9 bits), Expect = 1.2e-63, Sum P(5) = 1.2e-63
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +K+I+MSA+ D F+++F + + + + I Y DY+ + + TI
Sbjct: 166 QKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTIL 225
Query: 247 QVH 249
Q+H
Sbjct: 226 QIH 228
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 344 (126.2 bits), Expect = 1.2e-63, Sum P(5) = 1.2e-63
Identities = 68/151 (45%), Positives = 101/151 (66%)
Query: 281 LPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 340
+P+ + + ++SSLP+++Q +F P RKVIL+TNIAETSVTIP IKYVID G
Sbjct: 393 MPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGK 452
Query: 341 VKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEI 400
VK + +D +G L V ISK A+QRSGRAGRE PG+ +R+Y + E++ + PEI
Sbjct: 453 VKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEI 512
Query: 401 KRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
R +L+ + L+LKA+ +++ + F+F E P +
Sbjct: 513 FRSDLTQIYLELKAMNINNPLEFNFPENPRK 543
Score = 136 (52.9 bits), Expect = 1.2e-63, Sum P(5) = 1.2e-63
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 86 ELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDV 136
++G VGY+IRF + S TRIK E + DP L +Y +I+DE HER++ TDV
Sbjct: 97 DIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDV 156
Query: 137 LLGLLKKVQNARSK 150
LLG K + R K
Sbjct: 157 LLGYTKILLQKRKK 170
Score = 102 (41.0 bits), Expect = 1.2e-63, Sum P(5) = 1.2e-63
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 11 KSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFL 50
+ LPI + + + ++KN+++II GETG GKTTQ+PQ +
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQII 41
Score = 83 (34.3 bits), Expect = 1.2e-63, Sum P(5) = 1.2e-63
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 251 DEAPGDILVFLTGQEEIESVERLVQERL 278
D++ GDILVFL GQEEIE V +++E+L
Sbjct: 313 DKSLGDILVFLPGQEEIEMVNIMLKEKL 340
Score = 79 (32.9 bits), Expect = 1.2e-63, Sum P(5) = 1.2e-63
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +K+I+MSA+ D F+++F + + + + I Y DY+ + + TI
Sbjct: 166 QKRKKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTIL 225
Query: 247 QVH 249
Q+H
Sbjct: 226 QIH 228
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 445 (161.7 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 108/257 (42%), Positives = 151/257 (58%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 240
LKQ R+ LK+II SA++D FS++F A + V GR +PVE+ Y D ++
Sbjct: 223 LKQLLPRR-PDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSES 281
Query: 241 T---LITIFQV--HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIF 294
L IFQ L DE GDIL+F+ G+ EI + +R L+ E VP++
Sbjct: 282 DRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADALSKRNLRDTEI------VPLY 335
Query: 295 SSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMES 354
+ L + +Q ++F P A R+++LATN+AETS+T+PGIKYVIDPG + Y ++
Sbjct: 336 ARLSAGEQNKIFQPHAG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 393
Query: 355 LLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKA 414
L + PIS+A A QR GR GR G C RLY E +F + T PEI R NL++VILQ+ A
Sbjct: 394 LPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTA 453
Query: 415 LGVDDIIGFDFMEKPSR 431
LG+ DI F F+E P +
Sbjct: 454 LGLGDIEAFPFVEAPDK 470
Score = 242 (90.2 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 55/141 (39%), Positives = 81/141 (57%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 72
LP++ + + + + ++I+ GETGSGKTTQLP+ G + G LIG TQP
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYG-LIGHTQPRRLAA 145
Query: 73 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAII 123
EE ELG VGY +RF D+ S T+IK + +L D +L++Y II
Sbjct: 146 RSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTII 205
Query: 124 VDEAHERTVHTDVLLGLLKKV 144
+DEAHER+++ D +LG LK++
Sbjct: 206 IDEAHERSLNIDFILGYLKQL 226
Score = 45 (20.9 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 221 RQFPVEILYTLYPEPDYLDATL--ITIFQVHLDEAPGDILVFLTG 263
+ P + P P+Y DA L +T F++ L +A L +TG
Sbjct: 919 KSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRRMTG 963
Score = 38 (18.4 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 7/29 (24%), Positives = 18/29 (62%)
Query: 265 EEIESVERLVQERLLQLPEASRKLVTVPI 293
EE+ ++ +++ +L E+ ++L +PI
Sbjct: 481 EELGAINDQIKDPKKRLTESGKQLARLPI 509
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 445 (161.7 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 108/257 (42%), Positives = 151/257 (58%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 240
LKQ R+ LK+II SA++D FS++F A + V GR +PVE+ Y D ++
Sbjct: 223 LKQLLPRR-PDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSES 281
Query: 241 T---LITIFQV--HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIF 294
L IFQ L DE GDIL+F+ G+ EI + +R L+ E VP++
Sbjct: 282 DRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADALSKRNLRDTEI------VPLY 335
Query: 295 SSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMES 354
+ L + +Q ++F P A R+++LATN+AETS+T+PGIKYVIDPG + Y ++
Sbjct: 336 ARLSAGEQNKIFQPHAG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 393
Query: 355 LLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKA 414
L + PIS+A A QR GR GR G C RLY E +F + T PEI R NL++VILQ+ A
Sbjct: 394 LPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTA 453
Query: 415 LGVDDIIGFDFMEKPSR 431
LG+ DI F F+E P +
Sbjct: 454 LGLGDIEAFPFVEAPDK 470
Score = 242 (90.2 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 55/141 (39%), Positives = 81/141 (57%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 72
LP++ + + + + ++I+ GETGSGKTTQLP+ G + G LIG TQP
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYG-LIGHTQPRRLAA 145
Query: 73 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAII 123
EE ELG VGY +RF D+ S T+IK + +L D +L++Y II
Sbjct: 146 RSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTII 205
Query: 124 VDEAHERTVHTDVLLGLLKKV 144
+DEAHER+++ D +LG LK++
Sbjct: 206 IDEAHERSLNIDFILGYLKQL 226
Score = 45 (20.9 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 221 RQFPVEILYTLYPEPDYLDATL--ITIFQVHLDEAPGDILVFLTG 263
+ P + P P+Y DA L +T F++ L +A L +TG
Sbjct: 919 KSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRRMTG 963
Score = 38 (18.4 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 7/29 (24%), Positives = 18/29 (62%)
Query: 265 EEIESVERLVQERLLQLPEASRKLVTVPI 293
EE+ ++ +++ +L E+ ++L +PI
Sbjct: 481 EELGAINDQIKDPKKRLTESGKQLARLPI 509
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 434 (157.8 bits), Expect = 7.9e-62, Sum P(2) = 7.9e-62
Identities = 106/256 (41%), Positives = 152/256 (59%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT-LYPEPDYLD 239
LK+ R+ LK+II SA++D FS +F A + V GR +PVE+ Y + E D +
Sbjct: 213 LKELLPRR-PDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTE 271
Query: 240 AT-LITIFQV--HLD-EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
L IF L E+ GDIL+F++G+ EI + + L L R +P+++
Sbjct: 272 RDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK--LNL----RHTEILPLYA 325
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
L + +Q RVF + +G R+++LATN+AETS+T+PGIKYVIDPG + Y ++ L
Sbjct: 326 RLSNSEQNRVFQ-SHSG-RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRL 383
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
+ PIS+A A QR GR GR G C RLY E++F + T PEI R NL++VILQ+ AL
Sbjct: 384 PIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTAL 443
Query: 416 GVDDIIGFDFMEKPSR 431
G+ DI F F+E P +
Sbjct: 444 GLGDIAAFPFVEAPDK 459
Score = 241 (89.9 bits), Expect = 7.9e-62, Sum P(2) = 7.9e-62
Identities = 55/142 (38%), Positives = 81/142 (57%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+LP++ ++ ++E +R + ++I+ GETGSGKTTQLP+ G G LIG TQP
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLA 134
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAI 122
EE E G +GY +RF D S +T +K + +L D L +Y I
Sbjct: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194
Query: 123 IVDEAHERTVHTDVLLGLLKKV 144
I+DEAHER+++ D LLG LK++
Sbjct: 195 IIDEAHERSLNIDFLLGYLKEL 216
Score = 37 (18.1 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 266 EIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFA 307
++E+V++ Q+ + +LP A R+ V + E ++ FA
Sbjct: 1236 KVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFA 1277
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 358 (131.1 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 101/290 (34%), Positives = 151/290 (52%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF------CRD 58
++ + RK LPI +E+ ++E + ++ +II G+TG GKTTQ+PQFL+ AGF R
Sbjct: 233 EVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRS 292
Query: 59 GKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL--- 112
G +IG+TQP E GV LG+ VG+ +R+D + ++ IK + +L
Sbjct: 293 G-IIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLRE 351
Query: 113 ---DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXXXXXXXXSDMIL 169
D L RYS II+DEAHER+++TD+L+G+L +V R + + L
Sbjct: 352 IQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKS----------L 401
Query: 170 DRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGF---SEYF-GCAKAVHVQGRQFPV 225
G G T +CQ PLKLI+MSA+L F F + V RQ+PV
Sbjct: 402 QSG----GTVT-SECQ---ITPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPV 453
Query: 226 EILYTLYPE-PDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESV-ERL 273
I ++ E DY+ + +H G ILVF+TGQ E++ + E+L
Sbjct: 454 TIHFSKKTEIVDYIGEAYKKVMSIHKKLPQGGILVFVTGQREVDYLCEKL 503
Score = 314 (115.6 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 67/144 (46%), Positives = 91/144 (63%)
Query: 287 KLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLY 346
KL +P+++ L Q+RVF R V++ATN+AETS+TIPGIKYV+D G VK + Y
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 347 DPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKL-EDSTKPEIKRCNL 405
D GMES V IS+A A QR+GRAGR GPG C+RLY F + E+S+ PEI + +
Sbjct: 706 DSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPV 765
Query: 406 SNVILQLKALGVDDIIGFDFMEKP 429
VIL +K++ + + F F P
Sbjct: 766 DGVILLMKSMNIPKVENFPFPTPP 789
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 427 (155.4 bits), Expect = 4.4e-61, Sum P(2) = 4.4e-61
Identities = 107/249 (42%), Positives = 142/249 (57%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DYLDA----- 240
LK+I+MSA+++ FS YFG A V V GR FP+ ++Y EP + LD
Sbjct: 304 LKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLR 363
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 300
L I + E GD+LVFL+G EI SV Q +++ V +P+ S+L
Sbjct: 364 VLEAIDNKYPPEERGDLLVFLSGMAEISSVLEAAQT----YASRTQRWVVLPLHSALSVA 419
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
Q +VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP + L I
Sbjct: 420 DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWI 479
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
S+A A QR GRAGR GPG CFRLY E+++D PEI+R L ++LQ+K++ V D
Sbjct: 480 SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDP 539
Query: 421 IGFDFMEKP 429
F F+E P
Sbjct: 540 RTFPFIEPP 548
Score = 239 (89.2 bits), Expect = 4.4e-61, Sum P(2) = 4.4e-61
Identities = 50/149 (33%), Positives = 85/149 (57%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
K+ +R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ+L AGF +
Sbjct: 153 KLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VAC 208
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDPY 115
TQP ES + G +VGY IRF+ + +T+I ++ +P
Sbjct: 209 TQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPS 268
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L +Y +IVDE HER +H D LLG+L+++
Sbjct: 269 LPQYQVLIVDEVHERHLHNDFLLGVLRRL 297
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 427 (155.4 bits), Expect = 5.0e-61, Sum P(2) = 5.0e-61
Identities = 107/249 (42%), Positives = 142/249 (57%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DYLDA----- 240
LK+I+MSA+++ FS YFG A V V GR FP+ ++Y EP + LD
Sbjct: 309 LKVILMSATINISLFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLR 368
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 300
L I + E GD+LVFL+G EI SV Q +++ V +P+ S+L
Sbjct: 369 VLEAIDNKYPPEERGDLLVFLSGMAEISSVLEAAQT----YASRTQRWVVLPLHSALSVA 424
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
Q +VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP + L I
Sbjct: 425 DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWI 484
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
S+A A QR GRAGR GPG CFRLY E+++D PEI+R L ++LQ+K++ V D
Sbjct: 485 SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDP 544
Query: 421 IGFDFMEKP 429
F F+E P
Sbjct: 545 RTFPFIEPP 553
Score = 239 (89.2 bits), Expect = 5.0e-61, Sum P(2) = 5.0e-61
Identities = 50/149 (33%), Positives = 85/149 (57%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
K+ +R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ+L AGF +
Sbjct: 158 KLQHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VAC 213
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDPY 115
TQP ES + G +VGY IRF+ + +T+I ++ +P
Sbjct: 214 TQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPS 273
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L +Y +IVDE HER +H D LLG+L+++
Sbjct: 274 LPQYQVLIVDEVHERHLHNDFLLGVLRRL 302
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 423 (154.0 bits), Expect = 5.7e-61, Sum P(2) = 5.7e-61
Identities = 105/249 (42%), Positives = 144/249 (57%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DYLDA----- 240
LK+I+MSA+++ FS YF A V V GR FP+ ++Y EP + LD
Sbjct: 305 LKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLR 364
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 300
L +I + E GD+LVFL+G EI +V Q +++ V +P+ S+L
Sbjct: 365 VLESIDHKYPPEERGDLLVFLSGMAEISAVLEAAQT----YASHTQRWVVLPLHSALSVA 420
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
Q +VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP ++ L I
Sbjct: 421 DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWI 480
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
S+A A QR GRAGR GPG CFRLY E+++D PEI+R L +++LQ+K++ V D
Sbjct: 481 SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDP 540
Query: 421 IGFDFMEKP 429
F F+E P
Sbjct: 541 RTFPFIEPP 549
Score = 242 (90.2 bits), Expect = 5.7e-61, Sum P(2) = 5.7e-61
Identities = 52/153 (33%), Positives = 87/153 (56%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
K+ ++R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ+L AGF +
Sbjct: 154 KLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VAC 209
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDPY 115
TQP ES + G +VGY IRF+ S +T+I ++ +P
Sbjct: 210 TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPS 269
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L +Y +IVDE HER +H D LLG+L+++ R
Sbjct: 270 LPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTR 302
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 417 (151.9 bits), Expect = 9.4e-61, Sum P(2) = 9.4e-61
Identities = 103/247 (41%), Positives = 146/247 (59%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY----TLYPEPDYLD-----ATL 242
LKL+I SA++D FS +F A V V GR +PVEI Y + E D + A L
Sbjct: 220 LKLVITSATIDPERFSRHFDNAPIVRVPGRTYPVEIRYRPPDSAEEESDETERGEQQAIL 279
Query: 243 ITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQ 302
+ ++H + GDIL+FL+G+ EI R E L + A +++ P++S L +Q
Sbjct: 280 DAVDELHRENT-GDILIFLSGEREI----RDTAESLRKHHPADCEVL--PLYSRLTVSEQ 332
Query: 303 MRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISK 362
++F P G R+++LATN+AETS+T+PGI+ VID G+ + Y ++ L + IS+
Sbjct: 333 EKIFKPH--GRRRIVLATNVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISR 390
Query: 363 AQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIG 422
A A QR+GR GR GPG C RLY E +F + T PEI R NL+ VILQ+KAL + DI
Sbjct: 391 ASANQRAGRCGRVGPGVCIRLYSEQDFLNRPEFTDPEILRTNLAAVILQMKALNLGDIRV 450
Query: 423 FDFMEKP 429
F F+E P
Sbjct: 451 FPFVEPP 457
Score = 248 (92.4 bits), Expect = 9.4e-61, Sum P(2) = 9.4e-61
Identities = 57/145 (39%), Positives = 79/145 (54%)
Query: 7 LQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQ 66
L+ + LP++ + E +R+N ++I+ GETGSGKTTQLP+ AG G IG TQ
Sbjct: 68 LEYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQG-YIGHTQ 126
Query: 67 PXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLS 117
P +E LG+ VGY +RF D+T + IK E D +L
Sbjct: 127 PRRIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLD 186
Query: 118 RYSAIIVDEAHERTVHTDVLLGLLK 142
+Y +IVDEAHER+++ D LLG LK
Sbjct: 187 QYDTLIVDEAHERSLNIDFLLGYLK 211
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 425 (154.7 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 102/253 (40%), Positives = 145/253 (57%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 240
LKQ +K LK+II SA++D FS++F A + V GR +PVE Y + D
Sbjct: 212 LKQIL-KKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADL 270
Query: 241 TLITIFQVHLDEAP----GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 296
I +DE GDIL+F+ G+ EI + R + E +P+++
Sbjct: 271 DQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRRNYRDTEI------LPLYAR 324
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
L +Q +VF+ + G R+++LATN+AETS+T+PGI+YVIDPG + Y ++ L
Sbjct: 325 LSYGEQSKVFS-SHTG-RRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLP 382
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 416
+ PIS+A A QR GR GR GPG C RLY E +F+ T PEI R NL++VILQ+ A+G
Sbjct: 383 IEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTDPEILRTNLASVILQMLAIG 442
Query: 417 VDDIIGFDFMEKP 429
+ DI F F+E P
Sbjct: 443 LGDIAAFPFIEPP 455
Score = 239 (89.2 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 54/146 (36%), Positives = 80/146 (54%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+LP++ + + + + + N ++II GETGSGKTTQLP+ G G IG TQP
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRG-FIGHTQPRRLA 133
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAI 122
EE LG+ VG+ +RF D + + IK + +L D YL +Y I
Sbjct: 134 ARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTI 193
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNAR 148
I+DEAHER+++ D +LG LK++ R
Sbjct: 194 IIDEAHERSLNIDFILGYLKQILKKR 219
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 425 (154.7 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 102/253 (40%), Positives = 145/253 (57%)
Query: 181 LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDA 240
LKQ +K LK+II SA++D FS++F A + V GR +PVE Y + D
Sbjct: 212 LKQIL-KKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYPVETRYRPLVQDTEADL 270
Query: 241 TLITIFQVHLDEAP----GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 296
I +DE GDIL+F+ G+ EI + R + E +P+++
Sbjct: 271 DQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRRNYRDTEI------LPLYAR 324
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
L +Q +VF+ + G R+++LATN+AETS+T+PGI+YVIDPG + Y ++ L
Sbjct: 325 LSYGEQSKVFS-SHTG-RRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQRLP 382
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 416
+ PIS+A A QR GR GR GPG C RLY E +F+ T PEI R NL++VILQ+ A+G
Sbjct: 383 IEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTDPEILRTNLASVILQMLAIG 442
Query: 417 VDDIIGFDFMEKP 429
+ DI F F+E P
Sbjct: 443 LGDIAAFPFIEPP 455
Score = 239 (89.2 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 54/146 (36%), Positives = 80/146 (54%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+LP++ + + + + + N ++II GETGSGKTTQLP+ G G IG TQP
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRG-FIGHTQPRRLA 133
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAI 122
EE LG+ VG+ +RF D + + IK + +L D YL +Y I
Sbjct: 134 ARSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTI 193
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNAR 148
I+DEAHER+++ D +LG LK++ R
Sbjct: 194 IIDEAHERSLNIDFILGYLKQILKKR 219
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 463 (168.0 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 114/281 (40%), Positives = 166/281 (59%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +I+D ++ + +NT LK+ R+ L+L+IMSA+ DA+ S+YF + V
Sbjct: 422 SCVIIDEAHERS-LNTDLLLALLKKLLSRRI-DLRLVIMSATADAKQLSQYFFSCGILLV 479
Query: 219 QGRQFPVEILYTLYPEPD---------YLDATLITIFQVHLDEAPGDILVFLTGQEEIE- 268
GR FPVEI+Y+ + Y+ + ++H E G IL FLT Q E+E
Sbjct: 480 NGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEW 539
Query: 269 SVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVT 328
+ ER + P A + +P+ L E+Q RVF G RKVI ATNIAETS+T
Sbjct: 540 ACERFIT------PSA----IALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLT 588
Query: 329 IPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENE 388
IPG+KYVID G VK Y+P GM L V +S++ A QR+GRAGR PG+C+RLY +N+
Sbjct: 589 IPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKND 648
Query: 389 FDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
FD + + +PEI+R +L +L++ ALGV++I F+F++ P
Sbjct: 649 FDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAP 689
Score = 201 (75.8 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 51/156 (32%), Positives = 83/156 (53%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
R++ + LPI + +++++++ + I++++GETGSGK+TQL QFL +G ++
Sbjct: 296 RRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIV 355
Query: 63 GVTQPXXXXXXXXXXXXXEES-GVELGQRVGYSIRFDDRTSTSTRI----KEALLDPY-- 115
TQP EES G V + F S+++ LL Y
Sbjct: 356 -CTQPRKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMK 414
Query: 116 ---LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
LS S +I+DEAHER+++TD+LL LLKK+ + R
Sbjct: 415 DRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRR 450
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 417 (151.9 bits), Expect = 3.2e-60, Sum P(2) = 3.2e-60
Identities = 105/251 (41%), Positives = 143/251 (56%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT-------------LYPEPDYL 238
LK+I+MSA+++ FS YF A V V GR FP+ ++Y L P P +L
Sbjct: 307 LKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRP-FL 365
Query: 239 DATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLP 298
L I + E GD+LVFL+G EI +V Q +++ V +P+ S+L
Sbjct: 366 -RVLEAIDNKYPPEERGDLLVFLSGMAEITTVLDAAQA----YASLTQRWVVLPLHSALS 420
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
Q +VF A AG RK IL+TNIAETSVTI GI++V+D G VK YDP ++ L
Sbjct: 421 VSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEF 480
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVD 418
IS+A A QR GRAGR GPG C+RLY E+++D PEI+R L ++LQ+K++ V
Sbjct: 481 WISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVG 540
Query: 419 DIIGFDFMEKP 429
D F F+E P
Sbjct: 541 DPRTFPFIEPP 551
Score = 241 (89.9 bits), Expect = 3.2e-60, Sum P(2) = 3.2e-60
Identities = 51/149 (34%), Positives = 86/149 (57%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
K+ ++R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ+L AGF +
Sbjct: 156 KLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VAC 211
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDPY 115
TQP ES + G +VGY IRF+ S +T+I ++ +P
Sbjct: 212 TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPS 271
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L +Y +IVDE HER +H D LLG+L+++
Sbjct: 272 LPQYQVLIVDEVHERHLHNDFLLGVLQRL 300
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 421 (153.3 bits), Expect = 6.6e-60, Sum P(2) = 6.6e-60
Identities = 106/249 (42%), Positives = 144/249 (57%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DYLDAT-LIT 244
LK+I+MSA+++ FS YFG A V V GR FP+ ++Y EP + LD I
Sbjct: 305 LKVILMSATVNTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIR 364
Query: 245 IFQV----HLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 300
+ + + E GD+LVFL+G EI +V Q + S + V +P+ S+L
Sbjct: 365 VLEAIDSKYPPEERGDLLVFLSGLAEIGAVLEAAQAHARR----SGRWVVLPLHSTLSVA 420
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
Q +VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP ++ L I
Sbjct: 421 AQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWI 480
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
S+A A QR GRAGR GPG CFRLY E+++D PEI+R L ++LQ+K++ V D
Sbjct: 481 SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDP 540
Query: 421 IGFDFMEKP 429
F F+E P
Sbjct: 541 RTFPFIEPP 549
Score = 234 (87.4 bits), Expect = 6.6e-60, Sum P(2) = 6.6e-60
Identities = 51/149 (34%), Positives = 86/149 (57%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
++ ++R +LPI+ R+++ ++++ ++++ G+TG GK+TQ+PQ+L AGF +
Sbjct: 154 RLQRERAALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VAC 209
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---KEALL------DPY 115
TQP ES + G +VGY IRF+ S +T+I LL +P
Sbjct: 210 TQPRRIACISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQREPT 269
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L +Y +IVDE HER +H D LLG+L+++
Sbjct: 270 LPQYRVLIVDEVHERHLHNDFLLGVLQRL 298
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 421 (153.3 bits), Expect = 8.6e-60, Sum P(2) = 8.6e-60
Identities = 98/249 (39%), Positives = 149/249 (59%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT-LYPEP-----DYLDA----- 240
L+L++MSA+++ + FS YF A + V GR FP++++Y + PE + LD
Sbjct: 305 LRLVLMSATINIKLFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLR 364
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 300
L I Q + E GD+L+FL+G EI +++ Q +++ + +P+ S+L
Sbjct: 365 VLQGIDQRYPQEERGDLLLFLSGVAEISTIQEACQTYATH----TQRWIVLPLHSTLSLA 420
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
QQ +VF A G RK I++TNIAETSVTI G+++V+D G VK +DP M+ L I
Sbjct: 421 QQDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWI 480
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
S+A + QR GRAGR GPG C+RLY E+++D PEI R L ++ILQ+K++G+ D
Sbjct: 481 SRASSEQRKGRAGRTGPGVCYRLYSESDYDAFAPYPVPEIHRVALDSLILQMKSMGLGDP 540
Query: 421 IGFDFMEKP 429
F F++ P
Sbjct: 541 RTFTFIDPP 549
Score = 233 (87.1 bits), Expect = 8.6e-60, Sum P(2) = 8.6e-60
Identities = 55/153 (35%), Positives = 85/153 (55%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
K+ +++KSLPI ++VE VR + ++++ G+TG GK+TQ+PQ+L +G I
Sbjct: 154 KLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLASGINN----IAC 209
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---KEALL------DPY 115
TQP ES + G +VGY IRF+ + +T++ E LL D
Sbjct: 210 TQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQQDAS 269
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L +Y +IVDE HER +H D LLG+L+ + + R
Sbjct: 270 LGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLR 302
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 334 (122.6 bits), Expect = 1.3e-59, Sum P(3) = 1.3e-59
Identities = 73/168 (43%), Positives = 100/168 (59%)
Query: 265 EEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAE 324
EE E E +E + L +P++S LP++QQM+VF G R I+ATN+AE
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAE 807
Query: 325 TSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLY 384
TS+TIPGI+YV+D G K R Y+ G++S V +SKA A QR+GRAGR GPG C+RLY
Sbjct: 808 TSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLY 867
Query: 385 PENEF-DKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
F D + PEI R +++L +K++G+D I F F P R
Sbjct: 868 SSAVFEDFFPQFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDR 915
Score = 198 (74.8 bits), Expect = 1.3e-59, Sum P(3) = 1.3e-59
Identities = 47/98 (47%), Positives = 58/98 (59%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF---CRD--GK 60
I QQR LP+ + E R++E V +D +I+ GETGSGKTTQ+PQFL+ AGF D
Sbjct: 436 IQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPG 495
Query: 61 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFD 98
+IGVTQP E G + G RVGY IRFD
Sbjct: 496 MIGVTQPRRVAAVSMAERVGSELG-DHGHRVGYQIRFD 532
Score = 159 (61.0 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 40/104 (38%), Positives = 56/104 (53%)
Query: 61 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD-------RTSTSTR------- 106
+IGVTQP E G + G RVGY IRFD T+ +
Sbjct: 496 MIGVTQPRRVAAVSMAERVGSELG-DHGHRVGYQIRFDTTIKNEGKENGTALKFMTDGVL 554
Query: 107 IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
++E + D L++YSAII+DEAHER ++TD+L+G+L +V R K
Sbjct: 555 LREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRK 598
Score = 148 (57.2 bits), Expect = 1.3e-59, Sum P(3) = 1.3e-59
Identities = 39/93 (41%), Positives = 52/93 (55%)
Query: 189 FAPLKLIIMSASLDARGFSEYFGCAKA----VHVQGRQFPVEILYTLYPEPDYLDATLIT 244
+ PLKLIIMSA+L FSE K ++VQ RQ+PV I + DYL+
Sbjct: 607 YKPLKLIIMSATLRVSDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKK 666
Query: 245 IFQVHLDEAPGDILVFLTGQEEIES-VERLVQE 276
++H G IL+FLTGQ EI + V++L QE
Sbjct: 667 TCKIHRKLPEGGILIFLTGQNEITTLVKKLRQE 699
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 422 (153.6 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 105/249 (42%), Positives = 143/249 (57%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP-EP-----DYLDA----- 240
LK+++MSA+++ FS YFG A V V GR FP+ ++Y EP + LD
Sbjct: 305 LKVVLMSATINISLFSSYFGNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLR 364
Query: 241 TLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSE 300
L I + E GD+LVFL+G EI +V Q +++ V +P+ S+L
Sbjct: 365 VLEAIDNKYPPEERGDLLVFLSGMAEISAVLEPAQA----YASHTQRWVVLPLHSALSVA 420
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
Q +VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP ++ L I
Sbjct: 421 DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWI 480
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
S+A A QR GRAGR GPG CFRLY E+++D PEI+R L ++LQ+K++ V D
Sbjct: 481 SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDP 540
Query: 421 IGFDFMEKP 429
F F+E P
Sbjct: 541 RTFPFIEPP 549
Score = 229 (85.7 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
Identities = 50/149 (33%), Positives = 85/149 (57%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
K+ ++R +LPIA +++ ++++ ++++ G+TG GK+TQ+PQ+L AG C +
Sbjct: 154 KLQRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAG-CSH---VAC 209
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDPY 115
TQP ES + G +VGY IRF+ S +T+I ++ +P
Sbjct: 210 TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQREPS 269
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L +Y +IVDE HER +H D LLG+L+++
Sbjct: 270 LPQYQVLIVDEVHERHLHNDFLLGVLQRL 298
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 321 (118.1 bits), Expect = 5.3e-59, Sum P(2) = 5.3e-59
Identities = 69/155 (44%), Positives = 92/155 (59%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF G+ G I
Sbjct: 389 KESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKI 448
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTST--R-------IKEALLD 113
TQP E GV+LG VGYSIRF+D TS T R ++E L +
Sbjct: 449 ACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE 508
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P L+ YS ++VDEAHERT+HTD+L GL+K V R
Sbjct: 509 PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR 543
Score = 318 (117.0 bits), Expect = 5.3e-59, Sum P(2) = 5.3e-59
Identities = 59/129 (45%), Positives = 90/129 (69%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK+++ SA++D FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 541 RFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 600
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 601 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 660
Query: 307 APAAAGFRK 315
P G RK
Sbjct: 661 QPTPPGARK 669
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 351 (128.6 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 74/149 (49%), Positives = 96/149 (64%)
Query: 282 PEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 341
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 369 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 428
Query: 342 KARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK 401
K R YD V G+ S V +S+A A QR+GRAGR PG C+RLY F E PEI
Sbjct: 429 KKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEIT 488
Query: 402 RCNLSNVILQLKALGVDDIIGFDFMEKPS 430
R + ++ILQ+KAL V+ +I F F PS
Sbjct: 489 RRPVEDLILQMKALNVEKVINFPFPTPPS 517
Score = 294 (108.6 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 65/153 (42%), Positives = 95/153 (62%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQP 67
++R LPI S E+ ++E V ++ I+I+ GETGSGKTTQ+PQFL+ AGF + +IGVT+P
Sbjct: 34 EERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEP 93
Query: 68 XXXXXXXXXXXXXEESGVELGQRV-GYSIRFDDRTSTSTRIK---EALL------DPYLS 117
+E + L QRV Y IR++ + TRIK + +L D L
Sbjct: 94 RRVAAVAMSQRVAKE--MNLSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLL 151
Query: 118 RYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
RY +I+DEAHER+V+TD+L+GLL ++ R+K
Sbjct: 152 RYKVVIIDEAHERSVYTDILIGLLSRIVTLRAK 184
Score = 119 (46.9 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 41/136 (30%), Positives = 64/136 (47%)
Query: 185 QGRKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLD 239
+ ++ PLKL+IMSA+L F++ + + V+ RQFPV + + P DY
Sbjct: 182 RAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSG 241
Query: 240 ATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPS 299
+ ++H G ILVFLTGQ E+ ++ R RL + SR S
Sbjct: 242 ECFRKVCKIHRMLPAGGILVFLTGQAEVHALCR----RLRKAFPPSRARPQEKDDDQKDS 297
Query: 300 EQQMRVFAPAAAGFRK 315
++MR F + A +K
Sbjct: 298 VEEMRKFKKSRARAKK 313
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 459 (166.6 bits), Expect = 9.0e-59, Sum P(2) = 9.0e-59
Identities = 114/282 (40%), Positives = 164/282 (58%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEY-FGCAKAVH 217
S +I+D ++ + +NT L++ R+ L+L+IMSA+ DA S+Y F C +H
Sbjct: 419 SCVIIDEAHERS-LNTDLLLALLRKLLSRRI-DLRLVIMSATADANQLSQYLFDCG-ILH 475
Query: 218 VQGRQFPVEILYTLYPEPD---------YLDATLITIFQVHLDEAPGDILVFLTGQEEIE 268
V GR FPVEI+Y+ + Y + ++H E G IL FLT Q E+E
Sbjct: 476 VNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVE 535
Query: 269 -SVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSV 327
+ ER V P A + +P+ L E+Q VF G RKVI ATNIAETS+
Sbjct: 536 WACERFVA------PSA----IALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSL 584
Query: 328 TIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPEN 387
TIPG+KYVID G VK Y+P GM L V +S++ A QR+GRAGR PG+C+RLY +
Sbjct: 585 TIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKT 644
Query: 388 EFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
+FD + + +PEI+R +L +L++ ALG+D+I F+F++ P
Sbjct: 645 DFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAP 686
Score = 191 (72.3 bits), Expect = 9.0e-59, Sum P(2) = 9.0e-59
Identities = 49/146 (33%), Positives = 78/146 (53%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 72
LPI + +++++++ I++++GETGSGK+TQL QFL +G ++ TQP
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIV-CTQPRKIAA 361
Query: 73 XXXXXXXXEES-GVELGQRVGYSIRFDDRTSTSTRI----KEALLDPY-----LSRYSAI 122
EES G V + F S+++ LL Y LS S +
Sbjct: 362 MTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCV 421
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNAR 148
I+DEAHER+++TD+LL LL+K+ + R
Sbjct: 422 IIDEAHERSLNTDLLLALLRKLLSRR 447
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 351 (128.6 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 74/149 (49%), Positives = 96/149 (64%)
Query: 282 PEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFV 341
P+AS L +P++S L E+Q +VF P G R ++ATN+AETS+TIPGIKYV+D G V
Sbjct: 582 PDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKV 641
Query: 342 KARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIK 401
K R YD V G+ S V +S+A A QR+GRAGR PG C+RLY F E PEI
Sbjct: 642 KKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEIT 701
Query: 402 RCNLSNVILQLKALGVDDIIGFDFMEKPS 430
R + ++ILQ+KAL V+ +I F F PS
Sbjct: 702 RRPVEDLILQMKALNVEKVINFPFPTPPS 730
Score = 294 (108.6 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 65/153 (42%), Positives = 95/153 (62%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQP 67
++R LPI S E+ ++E V ++ I+I+ GETGSGKTTQ+PQFL+ AGF + +IGVT+P
Sbjct: 247 EERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEP 306
Query: 68 XXXXXXXXXXXXXEESGVELGQRV-GYSIRFDDRTSTSTRIK---EALL------DPYLS 117
+E + L QRV Y IR++ + TRIK + +L D L
Sbjct: 307 RRVAAVAMSQRVAKE--MNLSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLL 364
Query: 118 RYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
RY +I+DEAHER+V+TD+L+GLL ++ R+K
Sbjct: 365 RYKVVIIDEAHERSVYTDILIGLLSRIVTLRAK 397
Score = 119 (46.9 bits), Expect = 3.6e-32, Sum P(2) = 3.6e-32
Identities = 41/136 (30%), Positives = 64/136 (47%)
Query: 185 QGRKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLD 239
+ ++ PLKL+IMSA+L F++ + + V+ RQFPV + + P DY
Sbjct: 395 RAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSG 454
Query: 240 ATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPS 299
+ ++H G ILVFLTGQ E+ ++ R RL + SR S
Sbjct: 455 ECFRKVCKIHRMLPAGGILVFLTGQAEVHALCR----RLRKAFPPSRARPQEKDDDQKDS 510
Query: 300 EQQMRVFAPAAAGFRK 315
++MR F + A +K
Sbjct: 511 VEEMRKFKKSRARAKK 526
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 394 (143.8 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 100/256 (39%), Positives = 144/256 (56%)
Query: 192 LKLIIMSASLDARGFSEYFGC-----AKAVHVQGRQFPVEILYTLYPEPDYLD------- 239
LKLII SA++D + F+++F A + V GR FPVE+ Y + +D
Sbjct: 245 LKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDDQSPQ 304
Query: 240 -ATLITIFQVHLDEAP----GDILVFLTGQEEI-ESVERLVQERLLQLPEASRKLVTVPI 293
+I+ +DE GDILVFL G+ EI ++ LV+ L R +P+
Sbjct: 305 EVDIISGILSAVDELSDCGNGDILVFLNGEREIRDTAAALVKANL-------RHTNVLPL 357
Query: 294 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
++ L +Q ++F P + R ++LATN+AETS+T+PGIKYVIDPG + Y ++
Sbjct: 358 YARLTVSEQNQIFKPHSG--RNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ 415
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLK 413
L + P+S+A A QRSGR GR G C RLY E+++ + T PEI R NL+ VILQ+
Sbjct: 416 RLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSRAEFTDPEILRTNLATVILQMH 475
Query: 414 ALGVDDIIGFDFMEKP 429
AL + DI F F+E P
Sbjct: 476 ALDLGDIANFPFVEAP 491
Score = 252 (93.8 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 57/143 (39%), Positives = 83/143 (58%)
Query: 11 KSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXX 70
+ LPI+ ++ + N ++II GETGSGKTTQ+P+ G DG LIG TQP
Sbjct: 97 EGLPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDG-LIGHTQPRRI 155
Query: 71 XXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSA 121
EE G +LG++VGY +RF+D+ S + IK + +L D L +Y
Sbjct: 156 AARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDRLLLKYDT 215
Query: 122 IIVDEAHERTVHTDVLLGLLKKV 144
II+DEAHER+++ D +LG LK++
Sbjct: 216 IIIDEAHERSLNIDFILGYLKQI 238
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 373 (136.4 bits), Expect = 4.7e-58, Sum P(2) = 4.7e-58
Identities = 90/248 (36%), Positives = 135/248 (54%)
Query: 193 KLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY----------TLYPEPDYLDATL 242
+++I SA+++ FS YF + + +PV +++ T E L+ +
Sbjct: 154 RIVISSATINTAMFSRYFNECPVIKIDAVAYPVTVIFDPPDTPASTHTKEAEAALLEKIV 213
Query: 243 ITIFQVHLDEAPGDILVFLTGQEEIES-VERLVQERLLQLPEASRKLVTVPIFSSLPSEQ 301
+ +V G IL+FL G+ I++ + RL ER RKL +P++ L E+
Sbjct: 214 CIVERVIASRDKGAILIFLPGERSIKNCITRLSHERWF------RKLFLLPLYGRLSKEE 267
Query: 302 QMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPIS 361
Q +VF A G RKV++ATNIAETS+TI + VID G VK Y+P+ SL PIS
Sbjct: 268 QEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPIS 327
Query: 362 KAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDII 421
+A QR GRAGR G C+RLY ++F++ E T EI R +LS V++++ LG+ D
Sbjct: 328 QASCNQRRGRAGRVRAGTCYRLYSRDDFEQREPYTLEEIYRTDLSEVVMRMAELGIHDFE 387
Query: 422 GFDFMEKP 429
FDF+ P
Sbjct: 388 HFDFISPP 395
Score = 254 (94.5 bits), Expect = 4.7e-58, Sum P(2) = 4.7e-58
Identities = 60/148 (40%), Positives = 86/148 (58%)
Query: 11 KSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXX 70
K LP+ S + +++ + + ++++ TGSGKTTQLP L AG+ +G IGVTQP
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGY-NEGGAIGVTQPRRI 63
Query: 71 XXXXXXXXXXEES-GVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYS 120
++ V+ G VGY +RF+D T T+IK E LDP LS+YS
Sbjct: 64 AVLSVSEFIAKQVLHVQPGI-VGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYS 122
Query: 121 AIIVDEAHERTVHTDVLLGLLKKVQNAR 148
I+VDEAHER+++ D +LGLLK+V R
Sbjct: 123 IIMVDEAHERSLNIDFILGLLKRVLQQR 150
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 589 (212.4 bits), Expect = 3.9e-56, P = 3.9e-56
Identities = 128/313 (40%), Positives = 198/313 (63%)
Query: 119 YSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGI 178
Y+ D E+T+ + G+L + ++ R D +S D +R +T+ +
Sbjct: 642 YAIRFEDCTSEKTMIKYMTDGILLR-ESLRESDLDHYSAVIM-----DEAHERSLNTDVL 695
Query: 179 -NTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDY 237
L++ R+ + LKLI+ SA++D+ F+ +FG H+ GR FPV+IL++ P+ DY
Sbjct: 696 FGLLREVVSRR-SDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDY 754
Query: 238 LDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSL 297
++A + Q+HL GDIL+F+ GQE+IE + ERL L A L +PI+S L
Sbjct: 755 VEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENAPA-LAVLPIYSQL 813
Query: 298 PSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 357
PS+ Q ++F A G RK I+ATNIAETS+T+ GI +V+D G+ K ++++P GM++L V
Sbjct: 814 PSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQV 873
Query: 358 VPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALG 416
PIS+A A QR+GRAGR GPG+C+RLY ++ F +++ +T PEI+R NL+NV+L LK+LG
Sbjct: 874 YPISQANANQRAGRAGRTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLKSLG 933
Query: 417 VDDIIGFDFMEKP 429
V D++ F FM+ P
Sbjct: 934 VQDLLLFHFMDPP 946
Score = 324 (119.1 bits), Expect = 8.4e-28, P = 8.4e-28
Identities = 71/156 (45%), Positives = 101/156 (64%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ +L+QR+ LPI +V ++L+ +R N+I+I+VGETGSGKTTQL Q+L G+ G ++
Sbjct: 553 KKTLLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTSYG-MV 611
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP EE LG+ VGY+IRF+D TS T IK E+L +
Sbjct: 612 GCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLRESLRE 671
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
L YSA+I+DEAHER+++TDVL GLL++V + RS
Sbjct: 672 SDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRS 707
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 301 (111.0 bits), Expect = 4.2e-56, Sum P(3) = 4.2e-56
Identities = 64/125 (51%), Positives = 82/125 (65%)
Query: 305 VFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 364
VF A G RK IL+TNIAETSVTI GI++V+D G VK YDP ++ L IS+A
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 365 ALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFD 424
A QR GRAGR GPG CFRLY E+++D PEI+R L +++LQ+K++ V D F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFP 459
Query: 425 FMEKP 429
F+E P
Sbjct: 460 FIEPP 464
Score = 242 (90.2 bits), Expect = 4.2e-56, Sum P(3) = 4.2e-56
Identities = 52/153 (33%), Positives = 87/153 (56%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
K+ ++R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ+L AGF +
Sbjct: 154 KLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VAC 209
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDPY 115
TQP ES + G +VGY IRF+ S +T+I ++ +P
Sbjct: 210 TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPS 269
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L +Y +IVDE HER +H D LLG+L+++ R
Sbjct: 270 LPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTR 302
Score = 84 (34.6 bits), Expect = 4.2e-56, Sum P(3) = 4.2e-56
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEI 227
LK+I+MSA+++ FS YF A V V GR FP+ +
Sbjct: 305 LKVILMSATINISLFSSYFSNAPVVQVPGRLFPITV 340
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 331 (121.6 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 69/148 (46%), Positives = 94/148 (63%)
Query: 283 EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 342
+ S L +P++S L EQQ +VF P AG R ++ATN+AETS+TIPGIKYV+D G VK
Sbjct: 575 DPSIPLYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVK 634
Query: 343 ARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKR 402
R YD V G+ S V IS+A A QR+GRAGR PG C+RLY F ++ EI R
Sbjct: 635 KRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGDFSLFSEAEITR 694
Query: 403 CNLSNVILQLKALGVDDIIGFDFMEKPS 430
+ +++LQ+K L ++ ++ F F PS
Sbjct: 695 RPVEDLVLQMKDLNIEKVVNFPFPTPPS 722
Score = 286 (105.7 bits), Expect = 9.9e-56, Sum P(2) = 9.9e-56
Identities = 61/155 (39%), Positives = 95/155 (61%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
+I + R LP+ + E+ ++E V+ ++ +++ GETGSGKTTQ+PQFL+ AGF G +IGV
Sbjct: 244 EIQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGIIGV 303
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPY 115
T+P E + G V Y IR++ + +T+IK + +L D
Sbjct: 304 TEPRRVAAISMSHRVATEMNLSSGV-VSYQIRYEGNVTENTKIKVMTDGVLLKEIQRDFL 362
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
L +YS II+DEAHER+V+TD+L+GLL ++ R+K
Sbjct: 363 LQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNK 397
Score = 145 (56.1 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 84 GVELGQRVGYSIRFDDRTSTSTRIKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKK 143
GV +RV +I R +T + ++ Y RY + + + + VLL +++
Sbjct: 302 GVTEPRRVA-AISMSHRVATEMNLSSGVVS-YQIRYEGNVTENTKIKVMTDGVLLKEIQR 359
Query: 144 VQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDA 203
+ S +D+++ ++ + + +K P+KLIIMSA+L
Sbjct: 360 DFLLQKYSVIIIDEAHERSVYTDILIGL------LSRIVPLRNKKGLPMKLIIMSATLRV 413
Query: 204 RGFSE----YFGCAKAVHVQGRQFPVEILYTLY-PEPDYLDATLITIFQVHLDEAPGDIL 258
F+E + + V+ RQF V + + P DY T I ++H PG IL
Sbjct: 414 EDFTENKRLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGIL 473
Query: 259 VFLTGQEEIESVERLVQE 276
VFLTGQ E+ SV R +++
Sbjct: 474 VFLTGQAEVHSVCRRLRK 491
Score = 45 (20.9 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 255 GDILVFLTGQEEIESVERLVQERLLQLPEAS-RKLVTVPIFSSLPSEQQM 303
GD +F E E R V++ +LQ+ + + K+V P F + PS + +
Sbjct: 682 GDFSLF----SEAEITRRPVEDLVLQMKDLNIEKVVNFP-FPTPPSSEAL 726
Score = 37 (18.1 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 116 LSRYSAIIVDEAHE 129
L YSA+ VDE E
Sbjct: 529 LDNYSALPVDEGDE 542
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 469 (170.2 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 106/253 (41%), Positives = 160/253 (63%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 245
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 127 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 186
Query: 246 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 298
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 187 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 246
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VV
Sbjct: 247 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 306
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 417
PISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L +
Sbjct: 307 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 366
Query: 418 DDIIGFDFMEKPS 430
D+I F +++ P+
Sbjct: 367 HDVIRFPYLDPPN 379
Score = 126 (49.4 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 107 IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 155
+K L DP L+++S II+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 78 LKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 126
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 318 (117.0 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
Identities = 68/171 (39%), Positives = 101/171 (59%)
Query: 264 QEEIESVERLV--QERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATN 321
Q E E ++++ + + S + +P++S L +E QM+VF + G R I+ATN
Sbjct: 676 QSETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATN 735
Query: 322 IAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCF 381
+AETS+TIP I+YV+D G K R+Y+ ++ V ISKA A QR+GRAGR GPG C+
Sbjct: 736 VAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCY 795
Query: 382 RLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
RLY FD + PEI R + +++LQ+K + +D+I F F P R
Sbjct: 796 RLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGR 846
Score = 290 (107.1 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
Identities = 68/157 (43%), Positives = 93/157 (59%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC----RDGK 60
+I + R +LPI + E+R++E++ ND++II G TGSGKTTQLPQFLF AGF +
Sbjct: 390 EIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPG 449
Query: 61 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL----- 112
+I +TQP EE +V Y IRFD + T IK + +L
Sbjct: 450 MIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELS 508
Query: 113 -DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
D L+ YSA+IVDEAHER+V+TD+LLGLL ++ R
Sbjct: 509 SDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLR 545
Score = 160 (61.4 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 41/111 (36%), Positives = 61/111 (54%)
Query: 187 RKFAPLKLIIMSASLDARGFSE---YFGCAKAV-HVQGRQFPVEILYTLYPEPDYLDATL 242
+K PLKLIIMSA+L FSE F + + RQ+PV I + +PDYL
Sbjct: 553 QKVKPLKLIIMSATLRVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAF 612
Query: 243 ITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTV 291
+ +H G ILVFLTGQ+E+E + +++++R ++ P SR + V
Sbjct: 613 DKVCLIHKRLPAGSILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVV 663
Score = 46 (21.3 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 10/53 (18%), Positives = 28/53 (52%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF 55
++ +L+++ LP++ + RL + V D+ ++ + +T ++ +GF
Sbjct: 139 KKSLLEEKLGLPLSDADSRLYKVV---DVETTTTKSSTAETNAPEKYSTRSGF 188
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 320 (117.7 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 75/191 (39%), Positives = 110/191 (57%)
Query: 235 PDYLDATLITIFQVHL--DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVP 292
PD + LI H+ E PG +LVF+TG ++I S++ ++ L L + + K++ +
Sbjct: 557 PDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSL-LGDPN-KVLLLA 614
Query: 293 IFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGM 352
S+ S +Q +F G RK++LATN+AETS+TI + YVID G K YD +
Sbjct: 615 CHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNT 674
Query: 353 ESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQL 412
LL ISKA A QR GRAGR PG+C+ LYP ++ D +PE+ R L ++ LQ+
Sbjct: 675 PCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQI 734
Query: 413 KALGVDDIIGF 423
K+LG+ I F
Sbjct: 735 KSLGLGSISEF 745
Score = 194 (73.4 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 47/151 (31%), Positives = 76/151 (50%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF-CRDGKLI 62
QK++ RK+LP + L++ + N ++++ GETG GKTTQLPQ++ + G
Sbjct: 290 QKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATC 349
Query: 63 GV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEAL 111
+ TQP E G ++G+ VGY +R + TR+ + L
Sbjct: 350 SIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLL 409
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLK 142
+D L + ++VDE HER ++ D LL +LK
Sbjct: 410 VDRSLKGVTHVVVDEIHERGMNEDFLLIVLK 440
Score = 108 (43.1 bits), Expect = 1.3e-53, Sum P(3) = 1.3e-53
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 166 DMILDRG-NDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 224
D I +RG N+ + LK R+ LKLI+MSA+L+A FS YFG A A+H+ G +P
Sbjct: 423 DEIHERGMNEDFLLIVLKDLLPRR-PDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYP 481
Query: 225 VEILYTLYPEPDYLDAT 241
V + DYL+ +
Sbjct: 482 VRAHFL----EDYLETS 494
Score = 39 (18.8 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 202 DARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDY 237
D R F A + + RQ+ ++ + P P+Y
Sbjct: 160 DRRDFDHISALATRMGLHSRQYSKIVVISKAPLPNY 195
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 560 (202.2 bits), Expect = 4.7e-53, P = 4.7e-53
Identities = 128/333 (38%), Positives = 202/333 (60%)
Query: 102 STSTRIKEALLDPYLSR---YSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXX 158
S + R+ + + D L Y+ D ERTV + G+L + ++ R D +S
Sbjct: 594 SVAKRVSDEM-DTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLR-ESLRDPELDSYSAI 651
Query: 159 XXXXXXSDMILDRGNDTNGI-NTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVH 217
D +R T+ + L++ R+ LKLI+ SA++D+ F+ +FG
Sbjct: 652 IM-----DEAHERSLSTDVLFGLLREIVARRH-DLKLIVTSATMDSSKFATFFGNVPTFT 705
Query: 218 VQGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQER 277
+ GR FPV+++++ DY+++ + QVHL GD+L+F+ GQE+IE +++ER
Sbjct: 706 IPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEER 765
Query: 278 LLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVID 337
L ++ A L +PI+S LPS+ Q ++F ++ G RK ++ATNIAETS+T+ GI YVID
Sbjct: 766 LAEIDNAPA-LSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVID 824
Query: 338 PGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDST 396
G+ K ++Y+P GM++L + PIS+A A QRSGRAGR GPG+ +RLY + ++ D+L T
Sbjct: 825 SGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALT 884
Query: 397 KPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
PEI+R NL+N +L LK+LGV D++ F FM+ P
Sbjct: 885 VPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPP 917
Score = 319 (117.4 bits), Expect = 2.7e-27, P = 2.7e-27
Identities = 69/151 (45%), Positives = 97/151 (64%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I +QR+ LP+ + + L+ +R+N ++IIVGETGSGKTTQL Q+L G+ + G +I
Sbjct: 524 KKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRG-MI 582
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQP +E +LG+ VGY+IRF+D TS T IK E+L D
Sbjct: 583 GCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRD 642
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
P L YSAII+DEAHER++ TDVL GLL+++
Sbjct: 643 PELDSYSAIIMDEAHERSLSTDVLFGLLREI 673
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 302 (111.4 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 67/162 (41%), Positives = 100/162 (61%)
Query: 3 RQKILQQ-RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL 61
R K +Q+ R LPI + E R+VE + +N + ++ GETGSGKTTQ+PQFL+ AG+ +G+L
Sbjct: 225 RSKEIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGEL 284
Query: 62 IGVTQPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRTSTSTRI---------KEA 110
IG+T+P + GVEL + V Y IR++ S +T I KE
Sbjct: 285 IGITEPRRVAAIAMA----QRVGVELAKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEM 340
Query: 111 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSA 152
D L +YS I++DEAHER++++DVL+G+L ++ RSK+A
Sbjct: 341 EQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTA 382
Score = 283 (104.7 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 65/178 (36%), Positives = 93/178 (52%)
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 311
EA D F G ++ + V+ + P L +P++S L +Q RVF A
Sbjct: 541 EAFDDYEEFENGDGDLSDGK--VENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPA 598
Query: 312 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 371
G R +++TN+AETS+TIPG+KYVID GF K RLYD + G+ V IS+A QR+GR
Sbjct: 599 GMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGR 658
Query: 372 AGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
AGR G +RLY + PEI ++L LK++ + ++ F F P
Sbjct: 659 AGRISAGHAYRLYSSAVYQDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAP 716
Score = 125 (49.1 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 191 PLKLIIMSASLDARGFS--EYFGCA--KAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
PL+L+IMSA+L F+ + F K + V RQFPV + + DY+ +
Sbjct: 384 PLRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTC 443
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQER 277
++H PG ILVF+TGQ E++ + +++R
Sbjct: 444 RIHETLPPGAILVFVTGQHEVKQLITKLKKR 474
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 315 (115.9 bits), Expect = 5.0e-52, Sum P(3) = 5.0e-52
Identities = 74/166 (44%), Positives = 99/166 (59%)
Query: 254 PGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAG 312
PG +LVFL G EI+ + E+L R+ +R V P+ SSL +E+Q VF G
Sbjct: 890 PGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNR-CVVYPLHSSLSNEEQQAVFTRPQNG 948
Query: 313 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 372
K+I++TNIAETSVTI + YVID G +K + YD + MESL V +S+A ALQR GRA
Sbjct: 949 VTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRA 1008
Query: 373 GREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGV 417
GR G CF L+ + F+ L PEI+R L + L++K L V
Sbjct: 1009 GRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEV 1054
Score = 194 (73.4 bits), Expect = 5.0e-52, Sum P(3) = 5.0e-52
Identities = 55/149 (36%), Positives = 75/149 (50%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV--- 64
+QR+ LP + ++E + KN +L+I G TG GKTTQ+PQF+ F + G+ V
Sbjct: 577 EQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILD-NFLQTGRPDRVANI 635
Query: 65 --TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK----EALL-----D 113
TQP +E LG GY IR + S+ TR+ LL D
Sbjct: 636 ICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLEGD 695
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLK 142
P LS + +IVDE HERT +D LL +LK
Sbjct: 696 PELSGVTHVIVDEVHERTEESDFLLLVLK 724
Score = 101 (40.6 bits), Expect = 5.0e-52, Sum P(3) = 5.0e-52
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 188 KFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
K LK+I+MSA+L+A FS+YF +H+ GR FPVE
Sbjct: 729 KRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVE 767
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 320 (117.7 bits), Expect = 8.9e-52, Sum P(3) = 8.9e-52
Identities = 74/163 (45%), Positives = 98/163 (60%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 313
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF AG
Sbjct: 847 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGV 906
Query: 314 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 373
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 907 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 966
Query: 374 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKAL 415
R G CF L+ + ++ +L PEI+R L + L++K L
Sbjct: 967 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKIL 1009
Score = 201 (75.8 bits), Expect = 8.9e-52, Sum P(3) = 8.9e-52
Identities = 55/157 (35%), Positives = 79/157 (50%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
Q ILQ+R+SLP + ++ +RK+ +++I G TG GKTTQ+PQF+ + +
Sbjct: 535 QSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVA 594
Query: 64 ---VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL---- 112
TQP +E +G VGY IR + S++TR+ LL
Sbjct: 595 NIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLE 654
Query: 113 -DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
D L S IIVDE HERT +D LL +LK + + R
Sbjct: 655 GDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQR 691
Score = 86 (35.3 bits), Expect = 8.9e-52, Sum P(3) = 8.9e-52
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
L++I+MSA+L+A FS+YF + + GR FPV+
Sbjct: 694 LQVILMSATLNAELFSDYFNSCPVITIPGRTFPVD 728
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 318 (117.0 bits), Expect = 6.0e-51, Sum P(3) = 6.0e-51
Identities = 74/163 (45%), Positives = 97/163 (59%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 313
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 842 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGV 901
Query: 314 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 373
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 902 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 961
Query: 374 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKAL 415
R G CF L+ + F+ +L PEI+R L + L++K L
Sbjct: 962 RVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKIL 1004
Score = 192 (72.6 bits), Expect = 6.0e-51, Sum P(3) = 6.0e-51
Identities = 51/153 (33%), Positives = 77/153 (50%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
Q +LQ+R+SLP + +++ + K+ +L++ G TG GKTTQ+PQF+ + +
Sbjct: 528 QSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVA 587
Query: 64 ---VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL---- 112
TQP +E +G VGY IR + S++TR+ LL
Sbjct: 588 NIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLE 647
Query: 113 -DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
D L + IIVDE HERT +D LL +LK +
Sbjct: 648 GDTALQGVTHIIVDEVHERTEESDFLLLVLKDI 680
Score = 89 (36.4 bits), Expect = 6.0e-51, Sum P(3) = 6.0e-51
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
L++I+MSA+L+A FSEYF + + GR FPV+
Sbjct: 687 LQVILMSATLNAELFSEYFNSCPVITIPGRTFPVD 721
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 320 (117.7 bits), Expect = 7.6e-51, Sum P(3) = 7.6e-51
Identities = 74/163 (45%), Positives = 97/163 (59%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 313
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 843 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGV 902
Query: 314 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 373
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 903 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 962
Query: 374 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKAL 415
R G CF L+ + F+ +L PEI+R L + L++K L
Sbjct: 963 RVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKIL 1005
Score = 189 (71.6 bits), Expect = 7.6e-51, Sum P(3) = 7.6e-51
Identities = 52/153 (33%), Positives = 77/153 (50%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
Q ILQ+R+SLP + +++ + ++ +L+I G TG GKTTQ+PQF+ + +
Sbjct: 531 QSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEKVA 590
Query: 64 ---VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL---- 112
TQP +E +G VGY IR + S++TR+ LL
Sbjct: 591 NIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLE 650
Query: 113 -DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
D L + IIVDE HERT +D LL +LK +
Sbjct: 651 GDTSLQGVTHIIVDEVHERTEESDFLLLVLKDI 683
Score = 89 (36.4 bits), Expect = 7.6e-51, Sum P(3) = 7.6e-51
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
L++I+MSA+L+A FSEYF + + GR FPV+
Sbjct: 690 LQVILMSATLNAELFSEYFSSCPVITIPGRTFPVD 724
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 310 (114.2 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 77/201 (38%), Positives = 110/201 (54%)
Query: 234 EPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 291
E D +D LI I + L+E G ILVFL G + I ++ L+ +++ S K + +
Sbjct: 380 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFLII 436
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 437 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 496
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 411
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 497 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQ 556
Query: 412 LKALGVDDIIGF--DFMEKPS 430
+K L + I F M+ PS
Sbjct: 557 IKILRLGGIAYFLSRLMDPPS 577
Score = 176 (67.0 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 51/156 (32%), Positives = 72/156 (46%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 65
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 118 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCT 176
Query: 66 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 113
QP E G GY IR R +T ++ D
Sbjct: 177 QPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 236
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
PYLS S I++DE HER + +DVL+ ++K + N RS
Sbjct: 237 PYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 272
Score = 99 (39.9 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 231
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 274 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 312
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 329 (120.9 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 74/163 (45%), Positives = 100/163 (61%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 313
PG +L+FL G EI+ + +Q L S++ V P+ SSL SE+Q VF AG
Sbjct: 840 PGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGV 899
Query: 314 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 373
K+I++TNIAETSVTI + YVID G +K + YDP KGMESL +S+A ALQR GRAG
Sbjct: 900 IKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAG 959
Query: 374 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKAL 415
R G CF L+ + ++ +L PEI+R L + L++K L
Sbjct: 960 RVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKIL 1002
Score = 179 (68.1 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 49/157 (31%), Positives = 75/157 (47%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
Q +L +R+ LP + +++ + + +L++ G TG GKTTQ+PQF+ A +
Sbjct: 528 QSMLHERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVA 587
Query: 64 ---VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL---- 112
TQP +E +G VGY IR + S++TR+ LL
Sbjct: 588 NIICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLE 647
Query: 113 -DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
D L + +IVDE HERT +D LL +LK + R
Sbjct: 648 GDLTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQR 684
Score = 88 (36.0 bits), Expect = 1.2e-50, Sum P(3) = 1.2e-50
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
L++I+MSA+L+A FS+YF +++ GR FPV+
Sbjct: 687 LRIILMSATLNAELFSQYFHSCPIINIPGRTFPVD 721
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 356 (130.4 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 77/152 (50%), Positives = 100/152 (65%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I++QR+SLPI ++++L++ V N ILI++GETGSGKTTQ+ Q+L AG+ GK IG T
Sbjct: 468 IIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCT 526
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QP EE G LGQ VGY+IRF+D TS T IK E L+DP L
Sbjct: 527 QPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 586
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 587 TQYAIIMLDEAHERTIHTDVLFGLLKKTVQKR 618
Score = 202 (76.2 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 41/77 (53%), Positives = 54/77 (70%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+K +KLI+ SA+LDA FS+YF A + GR +PVEILYT PE DYLDA+LIT+
Sbjct: 616 QKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVM 675
Query: 247 QVHLDEAPGDILVFLTG 263
Q+HL E PG+ +V + G
Sbjct: 676 QIHLTEPPGEWIVMIHG 692
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 304 (112.1 bits), Expect = 3.3e-50, Sum P(3) = 3.3e-50
Identities = 72/191 (37%), Positives = 109/191 (57%)
Query: 235 PDYLDATLITIFQVHL--DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVP 292
PD + LI H+ E PG +LVFLTG ++I S+ ++ L L + +R L+ +
Sbjct: 518 PDCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPL-LGDPNRVLLLM- 575
Query: 293 IFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGM 352
S+ + +Q +F A RK++LATN+AE S+TI + +V+D G K YD +
Sbjct: 576 CHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNT 635
Query: 353 ESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQL 412
LL IS+A A QR GRAGR PG+C+ LYP+ +D + PE+ R L+++ LQ+
Sbjct: 636 PCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQI 695
Query: 413 KALGVDDIIGF 423
K+L V+ I F
Sbjct: 696 KSLQVESIAEF 706
Score = 187 (70.9 bits), Expect = 3.3e-50, Sum P(3) = 3.3e-50
Identities = 45/151 (29%), Positives = 78/151 (51%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF-CRDGKLIGV 64
+L+ RK+LP ++RL++ + +N ++++ GETG GKTTQLPQ++ + G +
Sbjct: 253 MLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNI 312
Query: 65 --TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLD 113
TQP E G LG+ VG+ +R + +T + + L D
Sbjct: 313 ICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSD 372
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L+ + + VDE HER ++ D L+ +LK++
Sbjct: 373 RNLNGVTHVFVDEIHERGMNEDFLIIVLKEL 403
Score = 98 (39.6 bits), Expect = 3.3e-50, Sum P(3) = 3.3e-50
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 166 DMILDRG-NDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 224
D I +RG N+ I LK+ R+ L+L++MSA+L+A FS Y+G A +H+ G P
Sbjct: 384 DEIHERGMNEDFLIIVLKELLPRR-PDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHP 442
Query: 225 VE 226
V+
Sbjct: 443 VK 444
Score = 37 (18.1 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 19 EKRLVEEVRKNDILIIVGE 37
+K+L+ RKN I +V E
Sbjct: 477 QKQLMPRKRKNQITTLVEE 495
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 310 (114.2 bits), Expect = 4.2e-50, Sum P(3) = 4.2e-50
Identities = 77/201 (38%), Positives = 110/201 (54%)
Query: 234 EPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 291
E D +D LI I + L+E G ILVFL G + I ++ L+ +++ S K + +
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFLII 522
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 523 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 582
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 411
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 583 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQ 642
Query: 412 LKALGVDDIIGF--DFMEKPS 430
+K L + I F M+ PS
Sbjct: 643 IKILRLGGIAYFLSRLMDPPS 663
Score = 176 (67.0 bits), Expect = 4.2e-50, Sum P(3) = 4.2e-50
Identities = 51/156 (32%), Positives = 72/156 (46%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 65
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCT 262
Query: 66 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 113
QP E G GY IR R +T ++ D
Sbjct: 263 QPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 322
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
PYLS S I++DE HER + +DVL+ ++K + N RS
Sbjct: 323 PYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 358
Score = 99 (39.9 bits), Expect = 4.2e-50, Sum P(3) = 4.2e-50
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 231
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 360 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 398
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 367 (134.2 bits), Expect = 6.4e-50, Sum P(2) = 6.4e-50
Identities = 87/240 (36%), Positives = 132/240 (55%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
L++I+MSA++ A + G A + +GR +PV + + + + L + + ++ +
Sbjct: 151 LRIIVMSATMAAAPVAALLGDAPVITSEGRNYPVALRHIPPNDRENLPSAVARAVRIAVR 210
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 311
E GDIL FL G EI +L+ + P LV VP++ LP +Q R P
Sbjct: 211 ECEGDILAFLPGVGEIRRCGQLLADD----PPLHAPLV-VPLYGDLPFVEQERAILPVP- 264
Query: 312 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 371
G RKV+LAT IAETS+TI G++ V+D G + YDP G+ L+ +S A A QR+GR
Sbjct: 265 GRRKVVLATTIAETSLTIEGVRVVVDGGQTRRLRYDPASGLNRLVTERVSAASATQRAGR 324
Query: 372 AGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
AGR GPG C+RL+PE++ L + PEI +L+ + L L GV D +++ P R
Sbjct: 325 AGRLGPGTCYRLWPEHDQQALLAADPPEILIADLAPLALDLAHWGVSDPASLAWLDPPPR 384
Score = 189 (71.6 bits), Expect = 6.4e-50, Sum P(2) = 6.4e-50
Identities = 48/142 (33%), Positives = 72/142 (50%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 72
LP+ V L+ + + + ++ G+GKTT++P L A + +GK I + +P
Sbjct: 4 LPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWL-NGKRIIMLEPRRLAA 62
Query: 73 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAII 123
G E G VGY+IRFD R S TR++ E +L DP L A+I
Sbjct: 63 TNAARWMARSLGEEAGATVGYAIRFDRRVSARTRVEVVTEGILTRRLQSDPLLEGVGAVI 122
Query: 124 VDEAHERTVHTDVLLGLLKKVQ 145
DE HER++H+D+ L L + VQ
Sbjct: 123 FDEFHERSIHSDLALALCRDVQ 144
Score = 40 (19.1 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 208 EYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDAT 241
E FGCA V + PV +++ L P L T
Sbjct: 768 EMFGCADTPAVAWGRVPV-VVHLLSPAGRPLQVT 800
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 302 (111.4 bits), Expect = 1.0e-49, Sum P(3) = 1.0e-49
Identities = 82/199 (41%), Positives = 110/199 (55%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIF 294
+D L+ H+D+ G ILVFL G EI + RL + AS + +P+
Sbjct: 864 VDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAAS--YRFRGASGDWL-LPLH 920
Query: 295 SSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMES 354
SS+ S +Q +VF G RKVI+ATNIAETS+TI + YVID G K Y+P K + S
Sbjct: 921 SSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSS 980
Query: 355 LLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTK-PEIKRCNLSNVILQLK 413
++ +SKA A QR GRAGR PG CF LY + F+KL + PE+ R L + L +K
Sbjct: 981 MVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIK 1040
Query: 414 ALGVDDIIGF--DFMEKPS 430
LG+ I F +E PS
Sbjct: 1041 LLGLGQIKPFLSKALEPPS 1059
Score = 187 (70.9 bits), Expect = 1.0e-49, Sum P(3) = 1.0e-49
Identities = 55/168 (32%), Positives = 87/168 (51%)
Query: 1 MPRQK-ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF-------H 52
M + K +L+ R +LPI+ V+K +++++++ D+L++ GETGSGKTTQ+PQF+ H
Sbjct: 584 MQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGH 643
Query: 53 AGFCRDGKLIGVTQPXXXXXXXXXXXXXEES--GVELGQRVGYSIRFDDRTSTSTRI--- 107
G+C I TQP E G + V Y +R + S TR+
Sbjct: 644 GGYCN----IICTQPRAITVAQRVADERCEPPPGFD-NSVVAYQVRHQNARSDKTRLLFC 698
Query: 108 ------KEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
++ + D L + IIVDE HER++ D LL +LK + +S
Sbjct: 699 TTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQS 746
Score = 99 (39.9 bits), Expect = 1.0e-49, Sum P(3) = 1.0e-49
Identities = 25/62 (40%), Positives = 32/62 (51%)
Query: 182 KQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE--ILYTLYPEPDYLD 239
KQ LK+I+MSA++DA FS YFG + QGR PV L +Y YL
Sbjct: 744 KQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLL 803
Query: 240 AT 241
A+
Sbjct: 804 AS 805
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 314 (115.6 bits), Expect = 2.0e-49, Sum P(3) = 2.0e-49
Identities = 73/163 (44%), Positives = 97/163 (59%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 313
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 799 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGV 858
Query: 314 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 373
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 859 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAG 918
Query: 374 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKAL 415
R G CF L+ + ++ +L PEI+R L + L++K L
Sbjct: 919 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKIL 961
Score = 180 (68.4 bits), Expect = 2.0e-49, Sum P(3) = 2.0e-49
Identities = 51/156 (32%), Positives = 77/156 (49%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG-- 63
ILQ+R+ LP + +++ + K+ +++I G TG GKTTQ+PQF+ + +
Sbjct: 488 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 547
Query: 64 -VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL-----D 113
TQP +E +G VGY IR + S++TR+ LL D
Sbjct: 548 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 607
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
L + IIVDE HERT +D LL +LK + R+
Sbjct: 608 ATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRA 643
Score = 90 (36.7 bits), Expect = 2.0e-49, Sum P(3) = 2.0e-49
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 190 APLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
A L++I+MSA+LDA FS+YF + + GR FPV+
Sbjct: 643 ATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVD 679
Score = 39 (18.8 bits), Expect = 3.2e-14, Sum P(3) = 3.2e-14
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 250 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPE 283
L+E D+ + L Q+E ESV+ + ++ L +
Sbjct: 721 LEEVEEDLRLALHLQDEEESVKDTIPDQQLDFKQ 754
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 314 (115.6 bits), Expect = 2.3e-49, Sum P(3) = 2.3e-49
Identities = 73/163 (44%), Positives = 97/163 (59%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 313
PG ILVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 852 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGV 911
Query: 314 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 373
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 912 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAG 971
Query: 374 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKAL 415
R G CF L+ + ++ +L PEI+R L + L++K L
Sbjct: 972 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKIL 1014
Score = 180 (68.4 bits), Expect = 2.3e-49, Sum P(3) = 2.3e-49
Identities = 51/156 (32%), Positives = 77/156 (49%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG-- 63
ILQ+R+ LP + +++ + K+ +++I G TG GKTTQ+PQF+ + +
Sbjct: 541 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 600
Query: 64 -VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL-----D 113
TQP +E +G VGY IR + S++TR+ LL D
Sbjct: 601 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 660
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
L + IIVDE HERT +D LL +LK + R+
Sbjct: 661 ATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRA 696
Score = 90 (36.7 bits), Expect = 2.3e-49, Sum P(3) = 2.3e-49
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 190 APLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
A L++I+MSA+LDA FS+YF + + GR FPV+
Sbjct: 696 ATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVD 732
Score = 39 (18.8 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 250 LDEAPGDILVFLTGQEEIESVERLVQERLLQLPE 283
L+E D+ + L Q+E ESV+ + ++ L +
Sbjct: 774 LEEVEEDLRLALHLQDEEESVKDTIPDQQLDFKQ 807
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 313 (115.2 bits), Expect = 2.9e-49, Sum P(3) = 2.9e-49
Identities = 72/163 (44%), Positives = 97/163 (59%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 313
PG +LVFL G EI+ + +Q L S + V P+ SSL SE+Q VF G
Sbjct: 849 PGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGV 908
Query: 314 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 373
K+I++TNIAETS+TI + YVID G +K + YD KGMESL +S+A ALQR GRAG
Sbjct: 909 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAG 968
Query: 374 REGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKAL 415
R G CF L+ + ++ +L PEI+R L + L++K L
Sbjct: 969 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKIL 1011
Score = 180 (68.4 bits), Expect = 2.9e-49, Sum P(3) = 2.9e-49
Identities = 51/156 (32%), Positives = 77/156 (49%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG-- 63
ILQ+R+ LP + +++ + K+ +++I G TG GKTTQ+PQF+ + +
Sbjct: 538 ILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANI 597
Query: 64 -VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL-----D 113
TQP +E +G VGY IR + S++TR+ LL D
Sbjct: 598 ICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGD 657
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
L + IIVDE HERT +D LL +LK + R+
Sbjct: 658 ATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRA 693
Score = 90 (36.7 bits), Expect = 2.9e-49, Sum P(3) = 2.9e-49
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 190 APLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
A L++I+MSA+LDA FS+YF + + GR FPV+
Sbjct: 693 ATLQVILMSATLDAGLFSKYFSYCPVITIPGRAFPVD 729
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 301 (111.0 bits), Expect = 3.8e-49, Sum P(3) = 3.8e-49
Identities = 83/201 (41%), Positives = 110/201 (54%)
Query: 236 DYLDATLITIFQVHLDEA--PGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVP 292
D +D L+ H+D+ G IL+FL G EI + + L + P A L P
Sbjct: 895 DRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLL---P 951
Query: 293 IFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGM 352
+ SS+ S +Q +VF G RKVI ATNIAETS+TI + YVID G K Y+P K +
Sbjct: 952 LHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKL 1011
Query: 353 ESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTK-PEIKRCNLSNVILQ 411
S++ IS+A A QR+GRAGR PG CF LY F+KL + PE+ R L + LQ
Sbjct: 1012 SSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQ 1071
Query: 412 LKALGVDDIIGF--DFMEKPS 430
+K LG+ I F +E PS
Sbjct: 1072 IKLLGLGHIKPFLSRALEPPS 1092
Score = 189 (71.6 bits), Expect = 3.8e-49, Sum P(3) = 3.8e-49
Identities = 56/164 (34%), Positives = 84/164 (51%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF-------HAGFCRD 58
+L+ R +LPI+ V+ +++ +++ D+L++ GETGSGKTTQ+PQF+ H G+C
Sbjct: 607 MLKTRTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCN- 665
Query: 59 GKLIGVTQPXXXXXXXXXXXXXEE---SGVELGQR-VGYSIRFDDRTSTSTRI----KEA 110
I TQP +E S L VGY +R + S TR+
Sbjct: 666 ---IICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGI 722
Query: 111 LL-----DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
LL D L+ + IIVDE HER++ D LL +LK + +S
Sbjct: 723 LLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQS 766
Score = 93 (37.8 bits), Expect = 3.8e-49, Sum P(3) = 3.8e-49
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV--EILYTLYPEPDYL 238
LK+I+MSA++DA FS YFG + QGR PV L +Y +YL
Sbjct: 774 LKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYL 822
Score = 39 (18.8 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 384 YPENEFDKLEDSTKPEIKRCNLSNVILQL 412
Y + ++ D T+ +KR N + +L
Sbjct: 873 YVSSNYNSYSDQTQQNLKRLNEDRIDYEL 901
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 310 (114.2 bits), Expect = 5.7e-49, Sum P(3) = 5.7e-49
Identities = 78/210 (37%), Positives = 115/210 (54%)
Query: 225 VEILYTLYPEPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLP 282
V++L + + D +D LI I + L+E G ILVFL G + I ++ L+ +++
Sbjct: 452 VDVLQMM--DDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF-- 507
Query: 283 EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 342
S K + +P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K
Sbjct: 508 -KSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIK 566
Query: 343 ARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKR 402
+D + ++ +SKA A QR GRAGR PG C+ LY L+D PEI R
Sbjct: 567 ETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILR 626
Query: 403 CNLSNVILQLKALGVDDIIGF--DFMEKPS 430
L + LQ+K L + I F M+ PS
Sbjct: 627 TPLEELCLQIKILRLGGIAYFLSRLMDPPS 656
Score = 165 (63.1 bits), Expect = 5.7e-49, Sum P(3) = 5.7e-49
Identities = 52/165 (31%), Positives = 75/165 (45%)
Query: 2 PRQKILQQ-RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
PR +Q+ RK LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK
Sbjct: 188 PRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYIERGK 246
Query: 61 ----LIGVTQPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STS 104
I TQP E G GY IR R +T
Sbjct: 247 GSACRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTG 306
Query: 105 TRIKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
++ D LS S I++DE HER + +DVL+ ++K + + RS
Sbjct: 307 IILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRS 351
Score = 99 (39.9 bits), Expect = 5.7e-49, Sum P(3) = 5.7e-49
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 231
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 353 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 391
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 308 (113.5 bits), Expect = 2.0e-48, Sum P(3) = 2.0e-48
Identities = 75/201 (37%), Positives = 110/201 (54%)
Query: 234 EPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 291
+ + +D LI I + L+E G ILVFL G + I ++ L+ +++ S K + +
Sbjct: 468 DDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFIII 524
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 525 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 584
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 411
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 585 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQ 644
Query: 412 LKALGVDDIIGF--DFMEKPS 430
+K L + I F M+ PS
Sbjct: 645 IKILRLGGIAHFLSRLMDPPS 665
Score = 163 (62.4 bits), Expect = 2.0e-48, Sum P(3) = 2.0e-48
Identities = 48/155 (30%), Positives = 71/155 (45%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 65
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 206 REKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCT 264
Query: 66 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 113
QP E G GY IR R +T ++ D
Sbjct: 265 QPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 324
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
P+LS S I++DE HER + +DVL+ ++K + + R
Sbjct: 325 PHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYR 359
Score = 98 (39.6 bits), Expect = 2.0e-48, Sum P(3) = 2.0e-48
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 231
LK+++MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 362 LKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 400
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 307 (113.1 bits), Expect = 3.4e-48, Sum P(3) = 3.4e-48
Identities = 76/201 (37%), Positives = 111/201 (55%)
Query: 234 EPDYLDATLITIFQVH--LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 291
+ D +D LI H L+E G ILVFL G + I ++ L+ +++ ++ R L+ +
Sbjct: 580 DDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF--KSDRFLI-I 636
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 637 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 696
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 411
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 697 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQ 756
Query: 412 LKALGVDDIIGF--DFMEKPS 430
+K L + I F M+ PS
Sbjct: 757 IKILRLGGIAYFLSRLMDPPS 777
Score = 160 (61.4 bits), Expect = 3.4e-48, Sum P(3) = 3.4e-48
Identities = 48/155 (30%), Positives = 70/155 (45%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 65
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 318 REKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYIERGKGSACRIVCT 376
Query: 66 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 113
QP E G GY IR R +T ++ D
Sbjct: 377 QPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 436
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+LS S I++DE HER + +DVL+ ++K + N R
Sbjct: 437 SHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFR 471
Score = 102 (41.0 bits), Expect = 3.4e-48, Sum P(3) = 3.4e-48
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 189 FAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 231
F P LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 470 FRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 512
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 304 (112.1 bits), Expect = 4.1e-48, Sum P(3) = 4.1e-48
Identities = 81/214 (37%), Positives = 117/214 (54%)
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHL--DEAPGDILVFLTGQEEIESVERLVQE 276
QG+Q + + T+ PE +D +LI + D G ILVFL G ++I ++
Sbjct: 516 QGQQLLDKYMATINPEQ--VDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKT----RQ 569
Query: 277 RLLQLP--EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKY 334
RLL+ P S K + + S +P+ +Q +VF G RK++LATNIAE++VTI + Y
Sbjct: 570 RLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVY 629
Query: 335 VIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLED 394
VID G +K + YDP + +L +SKA A QR GRAGR PG C+ LY + D
Sbjct: 630 VIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPD 689
Query: 395 STKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 428
PEIKR + + LQ+K L + DF++K
Sbjct: 690 FKVPEIKRMPVEELCLQVKILDPNCKTN-DFLQK 722
Score = 169 (64.5 bits), Expect = 4.1e-48, Sum P(3) = 4.1e-48
Identities = 46/153 (30%), Positives = 72/153 (47%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF-HAGFC-RDGKL 61
++I + R LPI S + + V N +++I GETG GKTTQ+PQ+L H R+
Sbjct: 178 KEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCK 237
Query: 62 IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALLDPYLS 117
I TQP E G +G+ +GY +R + + + LL +
Sbjct: 238 IVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVG 297
Query: 118 RYSA--------IIVDEAHERTVHTDVLLGLLK 142
+ S IIVDE HER ++D +L +++
Sbjct: 298 KGSVSSVSDITHIIVDEIHERDCYSDFMLAIIR 330
Score = 98 (39.6 bits), Expect = 4.1e-48, Sum P(3) = 4.1e-48
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
L+LI+MSA+LDA FS YFG V V G +PV LY
Sbjct: 339 LRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTLY 376
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 306 (112.8 bits), Expect = 5.1e-48, Sum P(3) = 5.1e-48
Identities = 76/201 (37%), Positives = 112/201 (55%)
Query: 234 EPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 291
+ D +D LI I + L+E G ILVFL G + I ++ L+ +++ ++ R L+ +
Sbjct: 458 DDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF--KSDRFLI-I 514
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 515 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 574
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 411
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 575 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQ 634
Query: 412 LKALGVDDIIGF--DFMEKPS 430
+K L + I F M+ PS
Sbjct: 635 IKILRLGGIAYFLSRLMDPPS 655
Score = 160 (61.4 bits), Expect = 5.1e-48, Sum P(3) = 5.1e-48
Identities = 51/164 (31%), Positives = 74/164 (45%)
Query: 2 PRQKILQQ-RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD-G 59
PR +Q+ RK LP ++K LV + + + +I GETG GKTTQ+ QF+ R G
Sbjct: 187 PRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNYIERGIG 246
Query: 60 KLIGV--TQPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STST 105
+ TQP E G GY IR R +T
Sbjct: 247 SACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGI 306
Query: 106 RIKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
++ D LS S I++DE HER + +DVL+ ++K + + RS
Sbjct: 307 ILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRS 350
Score = 99 (39.9 bits), Expect = 5.1e-48, Sum P(3) = 5.1e-48
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 231
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 352 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 390
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 293 (108.2 bits), Expect = 6.0e-48, Sum P(3) = 6.0e-48
Identities = 70/176 (39%), Positives = 101/176 (57%)
Query: 245 IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV-PIFSSLPSEQQM 303
++ + +E G ILVFL G ++I + ++ + + R + V P+ S + S +Q
Sbjct: 413 VYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQ 472
Query: 304 RVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 363
VF AG RKVI++T IAETSVTI + YVI+ G KA YD ++SL V ++KA
Sbjct: 473 AVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKA 532
Query: 364 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDD 419
QR GRAGR PG C+ L+ D+++D PEI R L ++IL LK L +DD
Sbjct: 533 NTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHIDD 588
Score = 221 (82.9 bits), Expect = 6.0e-48, Sum P(3) = 6.0e-48
Identities = 54/154 (35%), Positives = 76/154 (49%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF---CRDGK 60
+K L+ RK LP +++ VR+N +++IVG TG GKTTQ+PQ L C
Sbjct: 144 KKRLEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSC 203
Query: 61 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTS----------TSTRIKEA 110
I TQP E LG VGY IR + R + T +++
Sbjct: 204 RIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQL 263
Query: 111 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
DP + S +I+DE HER+V TD+L+GLLK +
Sbjct: 264 QSDPLMHNLSVLILDEIHERSVETDLLMGLLKVI 297
Score = 80 (33.2 bits), Expect = 6.0e-48, Sum P(3) = 6.0e-48
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
LK+I+MSA++ + F +YF ++G FPV++LY
Sbjct: 304 LKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLY 341
Score = 41 (19.5 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 100 RTSTSTRIK-EALLDPYLSR----YSAIIVDE 126
R R+K EA+++PYL R Y + ++D+
Sbjct: 363 RDPPERRMKHEAMIEPYLRRIRNSYDSRVLDK 394
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 338 (124.0 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 65/131 (49%), Positives = 96/131 (73%)
Query: 301 QQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPI 360
QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK ++P G++ L VVPI
Sbjct: 278 QQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPI 337
Query: 361 SKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVILQLKALGVDD 419
SK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +L++V+L LK L + D
Sbjct: 338 SKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD 397
Query: 420 IIGFDFMEKPS 430
+I F +++ P+
Sbjct: 398 VIRFPYLDPPN 408
Score = 193 (73.0 bits), Expect = 1.7e-47, Sum P(2) = 1.7e-47
Identities = 46/104 (44%), Positives = 59/104 (56%)
Query: 61 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL---- 112
+IGVTQP EE LG +VGY +RFDD +S T IK LL
Sbjct: 1 MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHIL 60
Query: 113 -DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 155
DP L+++S II+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 61 GDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 104
Score = 142 (55.0 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 49/154 (31%), Positives = 74/154 (48%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 245
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 105 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 164
Query: 246 FQVHLDEAPGDILVFLTGQEEIE-SVERLVQ--ERL---LQLPEASRK-LVTVPIFSSLP 298
+HL+E GDILVFLTGQ EIE S E L Q E + + + + L+ +P + S+
Sbjct: 165 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 224
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGI 332
+ Q + K I + T +TI GI
Sbjct: 225 TVSQTSLTFVTHIQIMKQISENQHSLTGLTIAGI 258
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 498 (180.4 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 111/259 (42%), Positives = 170/259 (65%)
Query: 186 GRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YL- 238
GRK +K+++MSA+L+ SE+FG +H+ GR +PV EI L D Y+
Sbjct: 148 GRK-TEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVT 206
Query: 239 DATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL------LQLPEASRK-LVTV 291
+A +T+ +HL+E GDILVFLTGQ EIE L+ ++ ++ + S + L+ +
Sbjct: 207 EAVKVTL-DIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLIL 265
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
P++ S+ ++QQ R+F PA G RK +++TNIA TS+TI G++YV+D GFVK ++P G
Sbjct: 266 PLYGSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVG 325
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSNVIL 410
++ L VVPISK++A+QR+GRAGR GK +RLY +++ + D T PEIKR +L++VIL
Sbjct: 326 LDILEVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVIL 385
Query: 411 QLKALGVDDIIGFDFMEKP 429
LK L V D+I F ++++P
Sbjct: 386 TLKCLSVHDVIRFPYLDRP 404
Score = 305 (112.4 bits), Expect = 3.3e-26, P = 3.3e-26
Identities = 81/208 (38%), Positives = 111/208 (53%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 72
LPI + LV V + LI+ GETGSGK+TQLP++L+ AG + G IGVTQP
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGA-IGVTQPRRVAT 59
Query: 73 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAII 123
EE G LG VGY +RFDD +S T IK L DP LS+YS II
Sbjct: 60 ISVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIII 119
Query: 124 VDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQ 183
+DEAHER++ TD+L GLLKK+ ++K + + + +D+ ++ G ++
Sbjct: 120 LDEAHERSLSTDILFGLLKKLF-LQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLH 178
Query: 184 CQGRKFAPLKLIIMSASLDAR--GFSEY 209
GR + P+K I + L R G S Y
Sbjct: 179 IPGRSY-PVKEIFCNL-LSPRDTGSSAY 204
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 293 (108.2 bits), Expect = 2.1e-47, Sum P(3) = 2.1e-47
Identities = 75/189 (39%), Positives = 104/189 (55%)
Query: 236 DYLDATLITIFQVHLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIF 294
D ++AT+ I ++ E G ILVFLTG +EI + E++ L S K + +P+
Sbjct: 488 DLVEATIEHICRL---EGGGAILVFLTGWDEISKLLEKINMNNFLG---DSSKFLVLPLH 541
Query: 295 SSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMES 354
S+P+ Q +F RK++LATNIAE+S+TI + YV+D G K YD + +
Sbjct: 542 GSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVAC 601
Query: 355 LLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKA 414
LL ISKA A QR GRAGR G C+RLYP+ +D PEI R L + L +K+
Sbjct: 602 LLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKS 661
Query: 415 LGVDDIIGF 423
L V I F
Sbjct: 662 LQVGSIGSF 670
Score = 203 (76.5 bits), Expect = 2.1e-47, Sum P(3) = 2.1e-47
Identities = 49/146 (33%), Positives = 74/146 (50%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR----DGKLIGVT 65
R+ LP +++ + V +N +L++ GETG GKTTQLPQF+ D +I T
Sbjct: 225 REKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNII-CT 283
Query: 66 QPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDPYL 116
QP E G +G+ VGY IR + + S TR+ + + DP L
Sbjct: 284 QPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNL 343
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLK 142
+ S ++VDE HER ++ D LL +L+
Sbjct: 344 TNVSHLLVDEIHERGMNEDFLLIILR 369
Score = 94 (38.1 bits), Expect = 2.1e-47, Sum P(3) = 2.1e-47
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 166 DMILDRG-NDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 224
D I +RG N+ + L+ R+ L+LI+MSA+++A FS YFG + +H+ G FP
Sbjct: 352 DEIHERGMNEDFLLIILRDLLPRR-PDLRLILMSATINADMFSTYFGNSPTMHIPGFTFP 410
Query: 225 VEILY 229
V L+
Sbjct: 411 VAELF 415
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 310 (114.2 bits), Expect = 3.4e-47, Sum P(3) = 3.4e-47
Identities = 76/193 (39%), Positives = 109/193 (56%)
Query: 228 LYTLYP---EPDYLDATLITIFQVHLD-EAPGDILVFLTGQEEIESVERLVQERLLQLPE 283
+Y + P P+ +++ L I + D G IL+FL G EI+SV + + L P
Sbjct: 722 IYLMEPMTINPELIESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPR 781
Query: 284 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 343
A K + VP+ S+L E Q VF A G RK++L+TNIAETSVTI +V+D G +K
Sbjct: 782 AG-KFILVPLHSALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKE 840
Query: 344 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKR 402
+ +D + MESL +V +S+A A QR GRAGR PG C LY + + PEI+R
Sbjct: 841 KCFDSNRNMESLDLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQR 900
Query: 403 CNLSNVILQLKAL 415
L ++L++K L
Sbjct: 901 VPLEQIVLRIKTL 913
Score = 149 (57.5 bits), Expect = 3.4e-47, Sum P(3) = 3.4e-47
Identities = 39/114 (34%), Positives = 58/114 (50%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
QKI+ RK LP + +R++ + + +++I GETG GK+TQ+PQF+ F R +L
Sbjct: 444 QKIIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPA 503
Query: 62 --------IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI 107
I TQP E +GQ VGY IR +++ S STR+
Sbjct: 504 KENLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRL 557
Score = 114 (45.2 bits), Expect = 2.9e-35, Sum P(2) = 2.9e-35
Identities = 33/93 (35%), Positives = 44/93 (47%)
Query: 65 TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKEA----LL-----DPY 115
TQP E +GQ VGY IR +++ S STR+ LL DP
Sbjct: 515 TQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPL 574
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L + +IVDE HER+ +D LL +LK + R
Sbjct: 575 LGSVTHVIVDEVHERSEESDFLLLILKNLLRER 607
Score = 103 (41.3 bits), Expect = 3.4e-47, Sum P(3) = 3.4e-47
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 166 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 225
D + +R +++ + + + R+ LK+I+MSA+L+A FS+YFG A + + GR FPV
Sbjct: 584 DEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFSDYFGGAPVLDIPGRTFPV 643
Query: 226 EILY 229
+ L+
Sbjct: 644 QQLF 647
>UNIPROTKB|Q9KUC1 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 330 (121.2 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 86/229 (37%), Positives = 125/229 (54%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQV--- 248
LK+++MSA+LD + A V QGR FP+EI Y +P D L+T Q
Sbjct: 150 LKIVVMSATLDQQALQNLLPQASYVESQGRGFPIEIRY----QPLRSDEPLVTAMQRQIR 205
Query: 249 HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFA 307
HL G +L FL G S+ +L + QL + + ++ P++ + Q R A
Sbjct: 206 HLLQHETGSLLAFLPGAA---SINQLTE----QLSDLASEVEICPLYGQMEFAAQQRAIA 258
Query: 308 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQ 367
P AAG RKV+LATNIAETS+TI GI+ V+D G ++ +D G+ L V I+++ A Q
Sbjct: 259 PTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQ 318
Query: 368 RSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 416
R+GRAGR PG C RLY E + + +PE+ +L+ + L+L G
Sbjct: 319 RAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPLALELAQWG 367
Score = 186 (70.5 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 48/144 (33%), Positives = 75/144 (52%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 72
LPI V +L+ + + LI+ G+GK+T P L AG GK+I + +P
Sbjct: 4 LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFH-GKII-MLEPRRLAA 61
Query: 73 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAII 123
++ G E+GQRVGY +R ++R S +T+++ E ++ DP L +I
Sbjct: 62 RNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLI 121
Query: 124 VDEAHERTVHTDVLLGLLKKVQNA 147
DE HER++H D L L +VQ+A
Sbjct: 122 FDEFHERSIHADTALALALEVQSA 145
>TIGR_CMR|VC_0601 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 330 (121.2 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 86/229 (37%), Positives = 125/229 (54%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQV--- 248
LK+++MSA+LD + A V QGR FP+EI Y +P D L+T Q
Sbjct: 150 LKIVVMSATLDQQALQNLLPQASYVESQGRGFPIEIRY----QPLRSDEPLVTAMQRQIR 205
Query: 249 HL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFA 307
HL G +L FL G S+ +L + QL + + ++ P++ + Q R A
Sbjct: 206 HLLQHETGSLLAFLPGAA---SINQLTE----QLSDLASEVEICPLYGQMEFAAQQRAIA 258
Query: 308 PAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQ 367
P AAG RKV+LATNIAETS+TI GI+ V+D G ++ +D G+ L V I+++ A Q
Sbjct: 259 PTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLKTGITRLEQVRIAQSSAEQ 318
Query: 368 RSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 416
R+GRAGR PG C RLY E + + +PE+ +L+ + L+L G
Sbjct: 319 RAGRAGRLEPGICVRLYSEAQLKQQPWVPEPEMLHTDLAPLALELAQWG 367
Score = 186 (70.5 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 48/144 (33%), Positives = 75/144 (52%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 72
LPI V +L+ + + LI+ G+GK+T P L AG GK+I + +P
Sbjct: 4 LPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFH-GKII-MLEPRRLAA 61
Query: 73 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAII 123
++ G E+GQRVGY +R ++R S +T+++ E ++ DP L +I
Sbjct: 62 RNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVDVLI 121
Query: 124 VDEAHERTVHTDVLLGLLKKVQNA 147
DE HER++H D L L +VQ+A
Sbjct: 122 FDEFHERSIHADTALALALEVQSA 145
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 309 (113.8 bits), Expect = 8.3e-45, Sum P(2) = 8.3e-45
Identities = 74/192 (38%), Positives = 109/192 (56%)
Query: 235 PDYLDATLITIFQVHL--DEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTV 291
PD + LI ++ +E PG IL+FLTG ++I S+ E+L + P+ ++ +
Sbjct: 477 PDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDL---VMLL 533
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
S+ + +Q +F A+G RK++LATNIAETS+TI + +VID G K YD +
Sbjct: 534 ACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNN 593
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 411
LL ISK A QR GRAGR PG+C+ LYP+ +D + PEI R L ++ LQ
Sbjct: 594 TPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQ 653
Query: 412 LKALGVDDIIGF 423
+K+L + I F
Sbjct: 654 IKSLNLGSISEF 665
Score = 204 (76.9 bits), Expect = 8.3e-45, Sum P(2) = 8.3e-45
Identities = 51/159 (32%), Positives = 79/159 (49%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF-CRDGKLI 62
Q++L R SLP ++ + +N +++I GETG GKTTQ+PQF+ + G
Sbjct: 211 QRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFS 270
Query: 63 GV--TQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI---------KEAL 111
+ TQP E G +LG+ VGY +R + TR+ + L
Sbjct: 271 SIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLL 330
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSK 150
+D L + +IVDE HER ++ D LL +LK + + RS+
Sbjct: 331 VDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSE 369
Score = 105 (42.0 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 166 DMILDRG-NDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 224
D I +RG N+ + LK R+ + LKLI+MSA+LDA FS YFG A +++ G +P
Sbjct: 344 DEIHERGMNEDFLLIILKDLLSRR-SELKLILMSATLDAELFSSYFGGAGVIYIPGFTYP 402
Query: 225 V 225
V
Sbjct: 403 V 403
Score = 37 (18.1 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 8/43 (18%), Positives = 18/43 (41%)
Query: 195 IIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDY 237
+I D R F + A + + + ++++ P P+Y
Sbjct: 76 VISREKKDRRDFDKLAALATTLGLYSHAYAKVVVFSKIPLPNY 118
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 278 (102.9 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 72/193 (37%), Positives = 108/193 (55%)
Query: 238 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 295
LD + ++ + H EA G IL+FL G +EI + +R++ + A R V + + S
Sbjct: 605 LDLIMHLLYNICHSCEA-GAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFM-LHS 662
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++ + Q +V AG RK+IL+TNIAETS+T+ + +VID G VK + +D + + L
Sbjct: 663 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 722
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
+V ISKA A+QR GRAGR PG CFRL+ F + + PE+ R L + L K L
Sbjct: 723 KMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL 782
Query: 416 GVDDIIGFDFMEK 428
+ DF+ K
Sbjct: 783 APVNCAIADFLMK 795
Score = 203 (76.5 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 54/145 (37%), Positives = 77/145 (53%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK--LIGVTQP 67
R+SLP+ ++ +V+ +++N +++IVGETGSGKTTQ+PQFL F ++G I TQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 68 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL------DPYLS 117
E +GQ +GY IR + R S T + LL D LS
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 118 RYSAIIVDEAHERTVHTDVLLGLLK 142
+ +IVDE HER +D LL L+
Sbjct: 308 TVTHVIVDEVHERDRFSDFLLTKLR 332
Score = 92 (37.4 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+K LKLI+ SA+LD F YFG +++QGR F V+ ++
Sbjct: 336 QKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 378
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 244 (91.0 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 59/151 (39%), Positives = 87/151 (57%)
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG-----------CAKAVHVQGRQFPVE 226
I LK+ Q +K L+LI+ SA+LDA F ++F C + V+GR FPV+
Sbjct: 154 IGLLKKIQ-KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCV-ILTVEGRTFPVD 211
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPEA 284
I Y P PDY+ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 212 IFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGM 271
Query: 285 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRK 315
R L +P+++ LPS +QM+VF + RK
Sbjct: 272 KRHLRVLPMYAGLPSFEQMKVFERVSRSVRK 302
Score = 237 (88.5 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 53/116 (45%), Positives = 71/116 (61%)
Query: 45 QLPQF--LFHAGFCRDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTS 102
+LP F L AG+ +G+++GVTQP EE G LG VGY IRFDD T
Sbjct: 49 KLPVFKYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTD 108
Query: 103 T-STRIK---------EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+TRIK E ++DP L++YS I++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 109 QLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR 164
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 285 (105.4 bits), Expect = 3.9e-43, Sum P(3) = 3.9e-43
Identities = 79/242 (32%), Positives = 130/242 (53%)
Query: 201 LDARGFSEYFGC-AKAVHVQGRQFPVEILYTLYPEPDY-LDATLITIFQVHLDEAPGDIL 258
++A+ + E + C A+ + + +E+L + + + L+ T I + ++E G IL
Sbjct: 448 IEAK-YHESWPCYARTLRDRFSDTTIEVLGMMDDDDNIDLELTAALIRHIAVNENEGAIL 506
Query: 259 VFLTGQEEIESVERLVQERLLQLPEASR-KLVTVPIFSSLP--SEQQM-----RVFAPAA 310
VFL G + I ++ L+ Q+ ++ R + + +P+ S +P S+ Q+ +VF
Sbjct: 507 VFLPGWDNISTLNDLLMSD--QMFKSGRYRFIIIPLHSLMPTVSQTQVISLFPQVFKKPP 564
Query: 311 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 370
G RK+++ATNIAETS+TI + YVID G +K +D + ++ +S A A QR G
Sbjct: 565 PGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRKG 624
Query: 371 RAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF--DFMEK 428
RAGR PGKC+ LY L++ PEI+R L + LQ+K L + I F M+
Sbjct: 625 RAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKVLKLGPIATFLQKTMDP 684
Query: 429 PS 430
PS
Sbjct: 685 PS 686
Score = 185 (70.2 bits), Expect = 3.9e-43, Sum P(3) = 3.9e-43
Identities = 52/159 (32%), Positives = 78/159 (49%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR-DGKLIG 63
++L+ RK LP + + LV + N +L+I GETG GKTTQ+ QF+ R G L
Sbjct: 212 EMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCR 271
Query: 64 V--TQPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKE 109
V TQP E +G+ GY IR R +T ++
Sbjct: 272 VVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQW 331
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
DPYLS + +++DE HER+V +D+L+ ++K + AR
Sbjct: 332 LHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTAR 370
Score = 88 (36.0 bits), Expect = 3.9e-43, Sum P(3) = 3.9e-43
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 225
LK+++MSA+L+A FS+YF +H+ G FPV
Sbjct: 373 LKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPV 406
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 272 (100.8 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 67/193 (34%), Positives = 109/193 (56%)
Query: 238 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 295
LD + ++ + H +A G +L+FL G +EI + +R++ + + +++ + + S
Sbjct: 606 LDLIMHLLYNICHSCDA-GAVLIFLPGYDEIVGLRDRILFDDK-RFADSTHRYQVFMLHS 663
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++ + Q +V AG RK+IL+TNIAETS+T+ + +VID G VK + +D + + L
Sbjct: 664 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 723
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
+V ISKA A+QR GRAGR PG CFRL+ F + + PE+ R L + L K L
Sbjct: 724 KMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL 783
Query: 416 GVDDIIGFDFMEK 428
+ DF+ K
Sbjct: 784 APVNCPIADFLMK 796
Score = 203 (76.5 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 54/145 (37%), Positives = 77/145 (53%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK--LIGVTQP 67
R+SLP+ ++ +V+ +++N +++IVGETGSGKTTQ+PQFL F ++G I TQP
Sbjct: 190 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 248
Query: 68 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL------DPYLS 117
E +GQ +GY IR + R S T + LL D LS
Sbjct: 249 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 308
Query: 118 RYSAIIVDEAHERTVHTDVLLGLLK 142
+ +IVDE HER +D LL L+
Sbjct: 309 TVTHVIVDEVHERDRFSDFLLTKLR 333
Score = 92 (37.4 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+K LKLI+ SA+LD F YFG +++QGR F V+ ++
Sbjct: 337 QKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 379
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 272 (100.8 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 68/193 (35%), Positives = 108/193 (55%)
Query: 238 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 295
LD + ++ + H +A G IL+FL G +EI + +R++ + + + + + + S
Sbjct: 621 LDLIMHLLYNICHSCDA-GAILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQVFMLHS 678
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++ + Q +V AG RK+IL+TNIAETS+T+ + +VID G VK + +D + + L
Sbjct: 679 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 738
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
+V ISKA A+QR GRAGR PG CFRL+ F + + PE+ R L + L K L
Sbjct: 739 KMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL 798
Query: 416 GVDDIIGFDFMEK 428
+ DF+ K
Sbjct: 799 APVNCTIADFLMK 811
Score = 203 (76.5 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 54/145 (37%), Positives = 77/145 (53%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK--LIGVTQP 67
R+SLP+ ++ +V+ +++N +++IVGETGSGKTTQ+PQFL F ++G I TQP
Sbjct: 205 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 263
Query: 68 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL------DPYLS 117
E +GQ +GY IR + R S T + LL D LS
Sbjct: 264 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 323
Query: 118 RYSAIIVDEAHERTVHTDVLLGLLK 142
+ +IVDE HER +D LL L+
Sbjct: 324 TVTHVIVDEVHERDRFSDFLLTKLR 348
Score = 92 (37.4 bits), Expect = 1.1e-42, Sum P(3) = 1.1e-42
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+K LKLI+ SA+LD F YFG +++QGR F V+ ++
Sbjct: 352 QKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 394
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 267 (99.0 bits), Expect = 1.2e-42, Sum P(3) = 1.2e-42
Identities = 68/193 (35%), Positives = 108/193 (55%)
Query: 238 LDATLITIFQV-HLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 295
LD + ++ + H +A G IL+FL G +EI + +R++ + + + + + + S
Sbjct: 605 LDLIMHLLYNICHGCDA-GAILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQVFMLHS 662
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++ + Q +V AG RK+IL+TNIAETS+T+ + +VID G VK + +D + + L
Sbjct: 663 NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML 722
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
+V ISKA A+QR GRAGR PG CFRL+ F + + PE+ R L + L K L
Sbjct: 723 KMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL 782
Query: 416 GVDDIIGFDFMEK 428
+ DF+ K
Sbjct: 783 APVNCPIADFLMK 795
Score = 203 (76.5 bits), Expect = 1.2e-42, Sum P(3) = 1.2e-42
Identities = 54/145 (37%), Positives = 77/145 (53%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK--LIGVTQP 67
R+SLP+ ++ +V+ +++N +++IVGETGSGKTTQ+PQFL F ++G I TQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 68 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALL------DPYLS 117
E +GQ +GY IR + R S T + LL D LS
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLS 307
Query: 118 RYSAIIVDEAHERTVHTDVLLGLLK 142
+ +IVDE HER +D LL L+
Sbjct: 308 TVTHVIVDEVHERDRFSDFLLTKLR 332
Score = 92 (37.4 bits), Expect = 1.2e-42, Sum P(3) = 1.2e-42
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+K LKLI+ SA+LD F YFG +++QGR F V+ ++
Sbjct: 336 QKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 378
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 329 (120.9 bits), Expect = 6.8e-42, Sum P(2) = 6.8e-42
Identities = 79/238 (33%), Positives = 124/238 (52%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKL+IMSA+LD + A V +GR FPVE Y P D + L
Sbjct: 150 LKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLR 209
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 311
+ G +L+FL G EI+ V+ + R+ ++ P++ +L Q + PA
Sbjct: 210 QESGSLLLFLPGVGEIQRVQEQLASRI------GSDVLLCPLYGALSLNDQRKAILPAPQ 263
Query: 312 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 371
G RKV+LATNIAETS+TI GI+ V+D + +DP G+ L+ +S+A QR+GR
Sbjct: 264 GMRKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGR 323
Query: 372 AGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKP 429
AGR PG L + + ++ ++PEI + +LS ++++L G D ++++P
Sbjct: 324 AGRLEPGISLHLIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQP 381
Score = 151 (58.2 bits), Expect = 6.8e-42, Sum P(2) = 6.8e-42
Identities = 47/144 (32%), Positives = 72/144 (50%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLP-QFLFHAGFCRDGKLIGVTQPXXX 70
SLP+A+V L+ + +++ TG+GK+T LP Q L H G +GK+I + +P
Sbjct: 3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGI--NGKII-LLEPRRL 59
Query: 71 XXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSA 121
E + G VGY +R + +TR++ E +L DP LS
Sbjct: 60 AARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGL 119
Query: 122 IIVDEAHERTVHTDVLLGLLKKVQ 145
+I+DE HER++ D+ L LL VQ
Sbjct: 120 VILDEFHERSLQADLALALLLDVQ 143
>TIGR_CMR|CPS_4302 [details] [associations]
symbol:CPS_4302 "ATP-dependent helicase HrpB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 RefSeq:YP_270952.1
ProteinModelPortal:Q47W70 STRING:Q47W70 DNASU:3518946
GeneID:3518946 KEGG:cps:CPS_4302 PATRIC:21471457
BioCyc:CPSY167879:GI48-4312-MONOMER Uniprot:Q47W70
Length = 845
Score = 329 (120.9 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 80/240 (33%), Positives = 130/240 (54%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LK+++MSA+LD S+ A ++ +GR +P+E+ Y + + + +
Sbjct: 156 LKILLMSATLDIEYLSQALPDAYLLNSEGRSYPIEVSYQAPRAHQRWREHALAVIKDKMY 215
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAA 311
G ILVFL G +I R + + L+ K+ P+F L ++Q + AP +
Sbjct: 216 NHIGSILVFLPGVADI----RFLLDSLMAQKVEGVKIC--PLFGELSLKEQQQAIAPCLS 269
Query: 312 GFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGR 371
G RK++LATNIAETS+TI GI VID G K ++D M L+ ISKA A+QR+GR
Sbjct: 270 GHRKIVLATNIAETSLTIDGIDLVIDCGLEKVAVFDSASLMNKLMQKQISKASAVQRAGR 329
Query: 372 AGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
AGR G+C RLY +++F++ + +I++ +L +++ GV + +E PS+
Sbjct: 330 AGRLMHGQCIRLYGKDDFERRPLHSVNDIQQADLLPTLIEAARWGVTALAELPLLELPSK 389
Score = 149 (57.5 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 40/142 (28%), Positives = 73/142 (51%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 72
LPI +++++ + + + + LI+ G+GK+T LP +L + K+ + QP
Sbjct: 9 LPIEAIKQQFCQSLDEQNTLILSAPPGAGKSTCLPLWLLTLPSLANKKIY-LLQPRRLAV 67
Query: 73 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAII 123
+ ++G+ VGY +R D +TSTSTR++ E +L D L + ++
Sbjct: 68 KNIATFLAAQLKEKVGETVGYRLRNDSKTSTSTRLEVITEGILTQIIQKDAELLGTALVV 127
Query: 124 VDEAHERTVHTDVLLGLLKKVQ 145
DE HER++ D+ L ++VQ
Sbjct: 128 FDEFHERSLQGDLAFALTREVQ 149
>UNIPROTKB|J3KSW6 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000580030 Uniprot:J3KSW6
Length = 268
Score = 321 (118.1 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 70/153 (45%), Positives = 93/153 (60%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+ PI K++++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQP
Sbjct: 32 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 90
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIKE----ALL-----DPYLSRYSAI 122
EE LG +VGY +RFDD +S T IK LL DP L+++S I
Sbjct: 91 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 150
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGH 155
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 151 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 183
Score = 133 (51.9 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 33/83 (39%), Positives = 46/83 (55%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD-----YLDATLITI 245
LK+++MSA+++ S +FG + GR +PV E L D Y+ A +
Sbjct: 184 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 243
Query: 246 FQVHLDEAPGDILVFLTGQEEIE 268
+HL+E GDILVFLTGQ EIE
Sbjct: 244 MDIHLNEMAGDILVFLTGQFEIE 266
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 308 (113.5 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 73/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 734
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 735 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 795 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 853
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 854 HMPEKTAVEFLSK 866
Score = 172 (65.6 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 452 RGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGA 510
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 511 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLR 570
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 571 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
Score = 81 (33.6 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 268 (99.4 bits), Expect = 3.9e-41, Sum P(3) = 3.9e-41
Identities = 65/167 (38%), Positives = 89/167 (53%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 313
PG +LVFL G I ++++ ++ S + +P+ S +P E+Q +VF P G
Sbjct: 653 PGAVLVFLPGWNLIYTMQKHLENNS---HFGSHRYQILPLHSQIPREEQRKVFDPVPDGV 709
Query: 314 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 373
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRAG
Sbjct: 710 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 769
Query: 374 REGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
R PG CF L FD+LE PE+ R L + L +K L + I
Sbjct: 770 RVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGI 816
Score = 203 (76.5 bits), Expect = 3.9e-41, Sum P(3) = 3.9e-41
Identities = 54/153 (35%), Positives = 81/153 (52%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
Q +LQ+R+ LP+ E ++E + +N ++II G TG GKTTQ+PQ++ F ++ +
Sbjct: 382 QSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILD-DFIQNDRAAE 440
Query: 62 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL-- 111
I VTQP E G E G+ GYS+RF+ R S + L
Sbjct: 441 CNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 500
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L+ + S +IVDE HER ++TD LL +L+ V
Sbjct: 501 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDV 533
Score = 79 (32.9 bits), Expect = 3.9e-41, Sum P(3) = 3.9e-41
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 189 FAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
+ +++++MSA++D F EYF + V GR FPV+
Sbjct: 537 YPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQ 574
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 391 (142.7 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 99/255 (38%), Positives = 145/255 (56%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDAT---------- 241
LKLI+MSA+++ F YF A V V GR FP+++ + +P ++D +
Sbjct: 216 LKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVRW--HPIKQFIDQSDKKTHKIDPE 273
Query: 242 -LITIFQVHLDEAP----GDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 296
+ I ++ + P GD L+FL G EI +V E L E + + + + S+
Sbjct: 274 PYLKILELIDKQFPSTQRGDALIFLNGVAEIS----MVAEHLKNYAELTNGWIILMLHST 329
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
L E+Q +VF A G RK IL+TN+AETSVTI GI++VID G V ++P G + L
Sbjct: 330 LSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLT 389
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 416
+SKA A QR GRAGR GPG C+RLY + +F+K++D T EI R +L + L++ +L
Sbjct: 390 EFWVSKASANQRKGRAGRTGPGICYRLYSQEQFEKMDDFTVSEINRVSLQEMALKMISLN 449
Query: 417 VD-DIIGFDFMEKPS 430
+ D F F+EKPS
Sbjct: 450 LGLDPRTFPFIEKPS 464
Score = 84 (34.6 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 113 DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
D L +Y+ II+DE HER + +D+L+GLL+ + R
Sbjct: 178 DSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKR 213
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 308 (113.5 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 73/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 732
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 733 NIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 792
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 793 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAK-I 851
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 852 HMPEKTAVEFLSK 864
Score = 171 (65.3 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 43/157 (27%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 450 RGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGA 508
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 509 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLR 568
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 569 KLQSNPSLEGVSHVVVDEVHERDVNTDFLLILLKGLQ 605
Score = 81 (33.6 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 566 LLRKLQS--NPSLEGVSHVVV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 618
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 619 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 648
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 303 (111.7 bits), Expect = 4.3e-41, Sum P(2) = 4.3e-41
Identities = 76/195 (38%), Positives = 110/195 (56%)
Query: 238 LDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTVPI 293
LD LIT + Q+ PG IL FL G +EI+ V Q+RLL++ + SR LV +P+
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGV----QQRLLEMLGSQNSRYLV-LPV 747
Query: 294 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
S++P Q +F G RK++LATNIAETS+TI I +V+D G K YD +
Sbjct: 748 HSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVS 807
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLK 413
L V +SK+ +QR GRAGR G + L+P + DK+ PEI R L N+++Q K
Sbjct: 808 CLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAK 867
Query: 414 ALGVDDIIGFDFMEK 428
+ + + +F+ K
Sbjct: 868 -IHMPEKTAVEFLSK 881
Score = 176 (67.0 bits), Expect = 4.3e-41, Sum P(2) = 4.3e-41
Identities = 43/152 (28%), Positives = 76/152 (50%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIG 63
Q+ LP+ + ++ + +N +++I G+TG GKTT++PQ L + +G+ +
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVV 531
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIKEALLD 113
+TQP +E G + + VGY +R + + + +++ +
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGN 591
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 592 PSLEGVSHVVVDEVHERDVNTDFLLILLKGIQ 623
Score = 84 (34.6 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 165 SDMILDRGNDTNGINT---LKQCQG-RKFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQ 219
S +++D ++ + +NT L +G +K P L+L++MSA+ D + FS YFG V V
Sbjct: 598 SHVVVDEVHERD-VNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCPVVKVP 656
Query: 220 GRQFPVEILY 229
G +PV+ Y
Sbjct: 657 GFMYPVKEYY 666
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 303 (111.7 bits), Expect = 4.3e-41, Sum P(2) = 4.3e-41
Identities = 76/195 (38%), Positives = 110/195 (56%)
Query: 238 LDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTVPI 293
LD LIT + Q+ PG IL FL G +EI+ V Q+RLL++ + SR LV +P+
Sbjct: 693 LDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGV----QQRLLEMLGSQNSRYLV-LPV 747
Query: 294 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
S++P Q +F G RK++LATNIAETS+TI I +V+D G K YD +
Sbjct: 748 HSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVS 807
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLK 413
L V +SK+ +QR GRAGR G + L+P + DK+ PEI R L N+++Q K
Sbjct: 808 CLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAK 867
Query: 414 ALGVDDIIGFDFMEK 428
+ + + +F+ K
Sbjct: 868 -IHMPEKTAVEFLSK 881
Score = 176 (67.0 bits), Expect = 4.3e-41, Sum P(2) = 4.3e-41
Identities = 43/152 (28%), Positives = 76/152 (50%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIG 63
Q+ LP+ + ++ + +N +++I G+TG GKTT++PQ L + +G+ +
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVV 531
Query: 64 VTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIKEALLD 113
+TQP +E G + + VGY +R + + + +++ +
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGN 591
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 592 PSLEGVSHVVVDEVHERDVNTDFLLILLKGIQ 623
Score = 84 (34.6 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 165 SDMILDRGNDTNGINT---LKQCQG-RKFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQ 219
S +++D ++ + +NT L +G +K P L+L++MSA+ D + FS YFG V V
Sbjct: 598 SHVVVDEVHERD-VNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCPVVKVP 656
Query: 220 GRQFPVEILY 229
G +PV+ Y
Sbjct: 657 GFMYPVKEYY 666
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 308 (113.5 bits), Expect = 4.6e-41, Sum P(2) = 4.6e-41
Identities = 73/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 622 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 678
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 679 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 738
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 739 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 797
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 798 HMPEKTAVEFLSK 810
Score = 170 (64.9 bits), Expect = 4.6e-41, Sum P(2) = 4.6e-41
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 396 RGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGA 454
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 455 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLR 514
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 515 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 551
Score = 81 (33.6 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 512 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 564
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 565 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 594
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 308 (113.5 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 73/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 825
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 826 HMPEKTAVEFLSK 838
Score = 170 (64.9 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 424 RGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGA 482
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 483 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLR 542
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 543 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
Score = 81 (33.6 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 307 (113.1 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 72/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 825
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 826 HMPEKTAVEFLSK 838
Score = 170 (64.9 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 424 RGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGA 482
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 483 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLR 542
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 543 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
Score = 81 (33.6 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 306 (112.8 bits), Expect = 6.3e-41, Sum P(2) = 6.3e-41
Identities = 72/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 825
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 826 HMPEKTAVEFLSK 838
Score = 171 (65.3 bits), Expect = 6.3e-41, Sum P(2) = 6.3e-41
Identities = 45/157 (28%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R I Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 424 RGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGA 482
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 483 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLR 542
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 543 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
Score = 81 (33.6 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 306 (112.8 bits), Expect = 6.3e-41, Sum P(2) = 6.3e-41
Identities = 72/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 825
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 826 HMPEKTAVEFLSK 838
Score = 171 (65.3 bits), Expect = 6.3e-41, Sum P(2) = 6.3e-41
Identities = 45/157 (28%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R I Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 424 RGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGA 482
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 483 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLR 542
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 543 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
Score = 81 (33.6 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 308 (113.5 bits), Expect = 6.7e-41, Sum P(2) = 6.7e-41
Identities = 73/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 676 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 732
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+TI I +V+D G K YD + L
Sbjct: 733 NIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCL 792
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 793 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAK-I 851
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 852 HMPEKTAVEFLSK 864
Score = 169 (64.5 bits), Expect = 6.7e-41, Sum P(2) = 6.7e-41
Identities = 43/157 (27%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 450 RGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGA 508
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 509 RCNVIITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLR 568
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 569 KLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQ 605
Score = 78 (32.5 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 165 SDMILDRGNDTNGINT---LKQCQG-RKFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQ 219
S +++D ++ + +NT L +G ++ P L+L++MSA+ D FS YFG + V
Sbjct: 580 SHVVVDEEHERD-VNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVP 638
Query: 220 GRQFPVEILY 229
G +PV+ Y
Sbjct: 639 GFMYPVKEHY 648
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 307 (113.1 bits), Expect = 6.7e-41, Sum P(2) = 6.7e-41
Identities = 72/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 681 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 737
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 738 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 797
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 798 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 856
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 857 HMPEKTAVEFLSK 869
Score = 170 (64.9 bits), Expect = 6.7e-41, Sum P(2) = 6.7e-41
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 452 RGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGA 510
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 511 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLR 570
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 571 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
Score = 81 (33.6 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 306 (112.8 bits), Expect = 6.7e-41, Sum P(2) = 6.7e-41
Identities = 72/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 673 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 729
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 730 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 789
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 790 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 848
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 849 HMPEKTAVEFLSK 861
Score = 171 (65.3 bits), Expect = 6.7e-41, Sum P(2) = 6.7e-41
Identities = 45/157 (28%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R I Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 447 RGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGA 505
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 506 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLR 565
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 566 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 602
Score = 81 (33.6 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 563 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 615
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 616 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 645
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 307 (113.1 bits), Expect = 6.8e-41, Sum P(2) = 6.8e-41
Identities = 72/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 734
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 735 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 795 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 853
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 854 HMPEKTAVEFLSK 866
Score = 170 (64.9 bits), Expect = 6.8e-41, Sum P(2) = 6.8e-41
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 452 RGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGA 510
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 511 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLR 570
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 571 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
Score = 81 (33.6 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 306 (112.8 bits), Expect = 6.8e-41, Sum P(2) = 6.8e-41
Identities = 72/193 (37%), Positives = 110/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 678 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 734
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS+T+ I +V+D G K YD + L
Sbjct: 735 NIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCL 794
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 795 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 853
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 854 HMPEKTAVEFLSK 866
Score = 171 (65.3 bits), Expect = 6.8e-41, Sum P(2) = 6.8e-41
Identities = 45/157 (28%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R I Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 452 RGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGA 510
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 511 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLR 570
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 571 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 607
Score = 81 (33.6 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 568 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 620
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 621 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 268 (99.4 bits), Expect = 9.8e-41, Sum P(3) = 9.8e-41
Identities = 65/167 (38%), Positives = 89/167 (53%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGF 313
PG +LVFL G I ++++ ++ S + +P+ S +P E+Q +VF P G
Sbjct: 652 PGAVLVFLPGWNLIYTMQKHLENNS---HFGSHRYQILPLHSQIPREEQRKVFDPVPDGV 708
Query: 314 RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAG 373
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRAG
Sbjct: 709 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 768
Query: 374 REGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
R PG CF L FD+LE PE+ R L + L +K L + I
Sbjct: 769 RVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGI 815
Score = 202 (76.2 bits), Expect = 9.8e-41, Sum P(3) = 9.8e-41
Identities = 54/153 (35%), Positives = 80/153 (52%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
Q +LQ+R+ LP+ E ++E + N ++II G TG GKTTQ+PQ++ F ++ +
Sbjct: 381 QSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILD-DFIQNDRAAE 439
Query: 62 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL-- 111
I VTQP E G E G+ GYS+RF+ R S + L
Sbjct: 440 CNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 499
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
L+ + S +IVDE HER ++TD LL +L+ V
Sbjct: 500 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDV 532
Score = 79 (32.9 bits), Expect = 9.8e-41, Sum P(3) = 9.8e-41
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 189 FAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
+ +++++MSA++D F EYF + V GR FPV+
Sbjct: 536 YPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQ 573
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 305 (112.4 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 73/193 (37%), Positives = 109/193 (56%)
Query: 238 LDATLITIFQVHLDEA--PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
LD L+T +H+D PG IL FL G +EI+ V++ +QE L + E+ K + +P+ S
Sbjct: 650 LDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEAL-GMHES--KYLILPVHS 706
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
++P Q +F G RK++LATNIAETS TI I +V+D G K YD + L
Sbjct: 707 NIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCL 766
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V +S+A +QR GRAGR G + L+P + +K+ PEI R L N++LQ K +
Sbjct: 767 ETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAK-I 825
Query: 416 GVDDIIGFDFMEK 428
+ + +F+ K
Sbjct: 826 HMPEKTAVEFLSK 838
Score = 170 (64.9 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 424 RGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGA 482
Query: 61 --LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRT----------STSTRIK 108
+ +TQP E G L + VG+ +R + + + ++
Sbjct: 483 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLR 542
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 543 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ 579
Score = 81 (33.6 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 140 LLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSA 199
LL+K+Q+ + S +G S D + +R +T+ + L + R L+L++MSA
Sbjct: 540 LLRKLQS--NPSLEGVSHVIV-----DEVHERDVNTDFLLILLKGLQRLNPALRLVLMSA 592
Query: 200 SLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+ D FS YFG + V G +PV+ Y
Sbjct: 593 TGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|Q8EJ41 [details] [associations]
symbol:hrpB "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 346 (126.9 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 89/245 (36%), Positives = 134/245 (54%)
Query: 166 DMILDRGNDTN-GINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 224
D I +R T+ G+ + Q LK++ MSA+L SE A + +GR FP
Sbjct: 123 DEIHERHLTTDLGLALALEVQSSLRDDLKILAMSATLSGLALSELMPYAALLKSEGRTFP 182
Query: 225 VEILYTLYPEP----DYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQ 280
VEI+Y D+L T++ D P DILVFL G+ EI V + + ERL
Sbjct: 183 VEIIYRAVAGQQHWLDHLSRTVLDSAASITDSGPQDILVFLPGKAEILRVAQYLAERL-- 240
Query: 281 LPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 340
+ SR + P++ L +++Q R A+G RK++L+TN+AE+S+TI GI VID G+
Sbjct: 241 --DGSRVAIC-PLYGELSAQEQDRAIKADASGRRKIVLSTNVAESSLTIEGIGLVIDSGY 297
Query: 341 VKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEI 400
+ ++P G+ L + IS+A A QR+GRAGR G C RL+ + E +L + +PEI
Sbjct: 298 KRQASFNPKTGVTRLSLKRISQASATQRAGRAGRLAAGVCIRLWGQEEHQRLLKADEPEI 357
Query: 401 KRCNL 405
+ +L
Sbjct: 358 SQADL 362
Score = 122 (48.0 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+LPI S+ L + + +I+ TG+GK+T LP + G+++ + +P
Sbjct: 3 NLPIHSLLPSLRDAFATHAQVILEAPTGAGKSTALPLAMLDWAEI-SGRIL-MLEPRRVA 60
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAI 122
+GQ VG+ +R + + S TR++ E +L DP L+ I
Sbjct: 61 ARSVAQFIASCRQQAVGQEVGFRVRGEAKVSRDTRLEIVTEGILTRMIQQDPELTGIDMI 120
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNA 147
I DE HER + TD+ L L +VQ++
Sbjct: 121 IFDEIHERHLTTDLGLALALEVQSS 145
>TIGR_CMR|SO_0632 [details] [associations]
symbol:SO_0632 "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 346 (126.9 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 89/245 (36%), Positives = 134/245 (54%)
Query: 166 DMILDRGNDTN-GINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 224
D I +R T+ G+ + Q LK++ MSA+L SE A + +GR FP
Sbjct: 123 DEIHERHLTTDLGLALALEVQSSLRDDLKILAMSATLSGLALSELMPYAALLKSEGRTFP 182
Query: 225 VEILYTLYPEP----DYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQ 280
VEI+Y D+L T++ D P DILVFL G+ EI V + + ERL
Sbjct: 183 VEIIYRAVAGQQHWLDHLSRTVLDSAASITDSGPQDILVFLPGKAEILRVAQYLAERL-- 240
Query: 281 LPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 340
+ SR + P++ L +++Q R A+G RK++L+TN+AE+S+TI GI VID G+
Sbjct: 241 --DGSRVAIC-PLYGELSAQEQDRAIKADASGRRKIVLSTNVAESSLTIEGIGLVIDSGY 297
Query: 341 VKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEI 400
+ ++P G+ L + IS+A A QR+GRAGR G C RL+ + E +L + +PEI
Sbjct: 298 KRQASFNPKTGVTRLSLKRISQASATQRAGRAGRLAAGVCIRLWGQEEHQRLLKADEPEI 357
Query: 401 KRCNL 405
+ +L
Sbjct: 358 SQADL 362
Score = 122 (48.0 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXX 71
+LPI S+ L + + +I+ TG+GK+T LP + G+++ + +P
Sbjct: 3 NLPIHSLLPSLRDAFATHAQVILEAPTGAGKSTALPLAMLDWAEI-SGRIL-MLEPRRVA 60
Query: 72 XXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAI 122
+GQ VG+ +R + + S TR++ E +L DP L+ I
Sbjct: 61 ARSVAQFIASCRQQAVGQEVGFRVRGEAKVSRDTRLEIVTEGILTRMIQQDPELTGIDMI 120
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNA 147
I DE HER + TD+ L L +VQ++
Sbjct: 121 IFDEIHERHLTTDLGLALALEVQSS 145
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 304 (112.1 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 87/253 (34%), Positives = 134/253 (52%)
Query: 180 TLKQCQGRKFAPLKLIIMSASLD-ARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYL 238
TLK +G L+L + A+ E+ G ++ Q + + + T+ PE +
Sbjct: 502 TLKSKEG--ITALELAEKENQFETAQIIREHAGNIQSNSQQAQDLLDKYMATIKPEE--V 557
Query: 239 DATLIT--IFQVHLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFS 295
D LI + ++ D G ILVFL G EEI E+L+ +R S K + + + S
Sbjct: 558 DVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFA---HSAKFIILCLHS 614
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
+P+E+Q +VF G RK++LATNIAE++VTI + YVID G +K + YDP + +L
Sbjct: 615 RVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTL 674
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
+SKA A QR+GRAGR G C+ LY + L + PE+ R + + LQ+K L
Sbjct: 675 QSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKML 734
Query: 416 GVDDIIGFDFMEK 428
+ + DF++K
Sbjct: 735 DPNCNVN-DFLQK 746
Score = 172 (65.6 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 48/154 (31%), Positives = 73/154 (47%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF-HAGFCRDG--K 60
++I + R LPIAS ++ V N +++I GETG GKTTQ+PQ+L H + K
Sbjct: 208 REIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACK 267
Query: 61 LIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI----KEALLDPYL 116
+I TQP E G +G+ VGY +R + + LL +
Sbjct: 268 II-CTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLI 326
Query: 117 SR--------YSAIIVDEAHERTVHTDVLLGLLK 142
+ + IIVDE HER ++D +L +L+
Sbjct: 327 GKGVNSSVPDITHIIVDEIHERDSYSDFMLMILR 360
Score = 97 (39.2 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
L+LI+MSA+LDA FSEYFG V V G +PV +
Sbjct: 369 LRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFF 406
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 92/211 (43%), Positives = 138/211 (65%)
Query: 165 SDMILDRGNDTNGINT------LKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHV 218
S +I+D ++ + +NT L++ R+ + LKLI+ SA++DA F+ +FG H+
Sbjct: 57 SAIIMDEAHERS-LNTDVLFGLLREVVARR-SDLKLIVTSATMDAEKFASFFGNVPIFHI 114
Query: 219 QGRQFPVEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERL 278
GR FPV+IL++ P+ DY++A + QVHL APGDIL+F+ GQE+IE + E L
Sbjct: 115 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 174
Query: 279 LQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 338
+L A L +PI+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID
Sbjct: 175 EELENAPA-LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 233
Query: 339 GFVKARLYDPVKGMESLLVVPISKAQALQRS 369
G+ K ++++P GM++L + PIS+A A QRS
Sbjct: 234 GYCKLKVFNPRIGMDALQIYPISQANANQRS 264
Score = 175 (66.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 81 EESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAIIVDEAHERT 131
EE G LG+ VGY+IRF+D TS ST IK E+L + L YSAII+DEAHER+
Sbjct: 9 EEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERS 68
Query: 132 VHTDVLLGLLKKVQNARS 149
++TDVL GLL++V RS
Sbjct: 69 LNTDVLFGLLREVVARRS 86
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 260 (96.6 bits), Expect = 3.9e-40, Sum P(3) = 3.9e-40
Identities = 63/173 (36%), Positives = 98/173 (56%)
Query: 257 ILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRK 315
IL+FL G +EI + +R++ + + + + + + S++ + Q +V AG RK
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRK 683
Query: 316 VILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGRE 375
+IL+TNIAETS+T+ + +VID G VK + +D + + L +V ISKA A+QR GRAGR
Sbjct: 684 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRC 743
Query: 376 GPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 428
PG CFRL+ F + + PE+ R L + L K L + DF+ K
Sbjct: 744 RPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMK 796
Score = 194 (73.4 bits), Expect = 3.9e-40, Sum P(3) = 3.9e-40
Identities = 54/146 (36%), Positives = 77/146 (52%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK--LIGVTQP 67
R+SLP+ ++ +V+ +++N +++IVGETGSGKTTQ+PQFL F ++G I TQP
Sbjct: 189 RQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQP 247
Query: 68 XXXXXXXXXXXXXEESGVELGQRVGYSIRFDDR-TSTSTRI----KEALL------DPYL 116
E +GQ +GY IR + R S T + LL D L
Sbjct: 248 RRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTL 307
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLK 142
S + +IVDE HER +D LL L+
Sbjct: 308 STVTHVIVDEVHERDRFSDFLLTKLR 333
Score = 92 (37.4 bits), Expect = 3.9e-40, Sum P(3) = 3.9e-40
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+K LKLI+ SA+LD F YFG +++QGR F V+ ++
Sbjct: 337 QKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMF 379
>TIGR_CMR|SPO_0972 [details] [associations]
symbol:SPO_0972 "ATP-dependent helicase HrpB"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
RefSeq:YP_166224.1 ProteinModelPortal:Q5LUT1 GeneID:3192888
KEGG:sil:SPO0972 PATRIC:23375231 HOGENOM:HOG000244610
ProtClustDB:CLSK933398 Uniprot:Q5LUT1
Length = 816
Score = 305 (112.4 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 83/238 (34%), Positives = 126/238 (52%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE---ILYTLYPEPDYLDAT--LITIF 246
L L+ MSA+LDA + A V QGR +PVE + + L P ++A L+
Sbjct: 150 LILLAMSATLDAGPVAALMD-APMVTSQGRAYPVETRWLDHPLGPRARRVEALADLVAKA 208
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
+ + G +LVFL G+ EI + L+ RL P++ P+F ++P Q
Sbjct: 209 EAETRDLGGSLLVFLPGEGEIRRAQTLLSARL---PDSC---TLRPLFGAMPFAAQRAAI 262
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
PA G R V+LAT+IAETS+TIP ++ V+D G + +DP GM L+ +++A+A
Sbjct: 263 RPATEG-RNVVLATSIAETSLTIPDVRVVVDMGQARRARFDPGSGMTRLVTERVTRAEAT 321
Query: 367 QRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDD-IIGF 423
QR+GRAGR G C+RL+ E L EI+ +L+ + L+L G + +GF
Sbjct: 322 QRAGRAGRVAEGICYRLWTRGEEGALAAFPPAEIEAADLTGLALELALWGAEPGALGF 379
Score = 154 (59.3 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 44/144 (30%), Positives = 71/144 (49%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPXXXXX 72
LPI L+ +R ++ G+GKTT++P L AG +G+++ + +P
Sbjct: 4 LPIDDALPDLISALRAQGRAVLQAPPGAGKTTRVPLALLSAGLT-NGRIV-MLEPRRLAA 61
Query: 73 XXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL------DPYLSRYSAII 123
E G +GQ VGY IR + + + +TRI+ E +L +P L A+I
Sbjct: 62 RAAAERMAETLGEPVGQTVGYRIRGEAKRTNATRIEVVTEGILTRMLQAEPDLPGIGAVI 121
Query: 124 VDEAHERTVHTDVLLGLLKKVQNA 147
DE HER+++ D+ L L +V A
Sbjct: 122 FDEFHERSLNADLGLALCLEVTEA 145
>GENEDB_PFALCIPARUM|MAL13P1.14 [details] [associations]
symbol:MAL13P1.14 "ATP-dependent DEAD box
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 245 (91.3 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 55/157 (35%), Positives = 87/157 (55%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I + R SLP+ E+ L+E V D++ + G+TG GK+TQ+PQFL+ GF + I
Sbjct: 448 KEHIDKVRASLPVLDYEQELIEAVLNYDVVFVNGDTGCGKSTQVPQFLYEYGFTSNDYFI 507
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFD-------DRTSTSTR---IKEALL 112
G+TQP +E E+ GY IRF+ + T +KE +
Sbjct: 508 GITQPRKIAVKSICNRLNDELNEEI---CGYQIRFEKSYFLKHSKIKVMTEGILLKEIMS 564
Query: 113 DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
D LS+YS II+DEAHER+++ D+++G+L + R+
Sbjct: 565 DFILSKYSVIILDEAHERSINMDIIIGILSIISKIRN 601
Score = 178 (67.7 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 39/92 (42%), Positives = 54/92 (58%)
Query: 283 EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 342
+ S L ++S LP + QM +F R IL+TNIAETS+T+P I+YVID G K
Sbjct: 877 DGSGTLKVFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEK 936
Query: 343 ARLYDPVKGMESLLVVPISKAQALQRSGRAGR 374
++Y + ++ ISK A+QR GRAGR
Sbjct: 937 RKIYSNLNDYSYYIIDNISKCSAIQRKGRAGR 968
Score = 104 (41.7 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 191 PLKLIIMSASLDARGF--SEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQV 248
P+K+IIMSA+++ ++ F V++ ++ V + Y DY++ I Q+
Sbjct: 613 PIKIIIMSATINDNNLFQNKIFQNFTTVNIPTQKVQVIDHFLSYTPKDYVEEAKRKIIQI 672
Query: 249 HLDEAPGDILVFLTGQEEI 267
H G ILVFLT QEEI
Sbjct: 673 HKKLPQGSILVFLTSQEEI 691
Score = 59 (25.8 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 378 GKCFRLYPENEFDKL--EDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
G ++LY N ++ D+ P I L ++IL L + + ++ F F+ KP +
Sbjct: 988 GHVYKLYSSNYYNYFFKNDNDYP-ILNYPLDSLILYLLSFNIKNVENFPFINKPDK 1042
Score = 40 (19.1 bits), Expect = 3.2e-17, Sum P(4) = 3.2e-17
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 170 DRGNDTNGINTLKQCQG 186
++ ND NGIN + G
Sbjct: 392 EKKNDINGINGINHING 408
>UNIPROTKB|Q8IET8 [details] [associations]
symbol:MAL13P1.14 "ATP dependent DEAD-box helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 245 (91.3 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 55/157 (35%), Positives = 87/157 (55%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I + R SLP+ E+ L+E V D++ + G+TG GK+TQ+PQFL+ GF + I
Sbjct: 448 KEHIDKVRASLPVLDYEQELIEAVLNYDVVFVNGDTGCGKSTQVPQFLYEYGFTSNDYFI 507
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFD-------DRTSTSTR---IKEALL 112
G+TQP +E E+ GY IRF+ + T +KE +
Sbjct: 508 GITQPRKIAVKSICNRLNDELNEEI---CGYQIRFEKSYFLKHSKIKVMTEGILLKEIMS 564
Query: 113 DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
D LS+YS II+DEAHER+++ D+++G+L + R+
Sbjct: 565 DFILSKYSVIILDEAHERSINMDIIIGILSIISKIRN 601
Score = 178 (67.7 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 39/92 (42%), Positives = 54/92 (58%)
Query: 283 EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 342
+ S L ++S LP + QM +F R IL+TNIAETS+T+P I+YVID G K
Sbjct: 877 DGSGTLKVFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEK 936
Query: 343 ARLYDPVKGMESLLVVPISKAQALQRSGRAGR 374
++Y + ++ ISK A+QR GRAGR
Sbjct: 937 RKIYSNLNDYSYYIIDNISKCSAIQRKGRAGR 968
Score = 104 (41.7 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 191 PLKLIIMSASLDARGF--SEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQV 248
P+K+IIMSA+++ ++ F V++ ++ V + Y DY++ I Q+
Sbjct: 613 PIKIIIMSATINDNNLFQNKIFQNFTTVNIPTQKVQVIDHFLSYTPKDYVEEAKRKIIQI 672
Query: 249 HLDEAPGDILVFLTGQEEI 267
H G ILVFLT QEEI
Sbjct: 673 HKKLPQGSILVFLTSQEEI 691
Score = 59 (25.8 bits), Expect = 1.3e-39, Sum P(4) = 1.3e-39
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 378 GKCFRLYPENEFDKL--EDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSR 431
G ++LY N ++ D+ P I L ++IL L + + ++ F F+ KP +
Sbjct: 988 GHVYKLYSSNYYNYFFKNDNDYP-ILNYPLDSLILYLLSFNIKNVENFPFINKPDK 1042
Score = 40 (19.1 bits), Expect = 3.2e-17, Sum P(4) = 3.2e-17
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 170 DRGNDTNGINTLKQCQG 186
++ ND NGIN + G
Sbjct: 392 EKKNDINGINGINHING 408
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 310 (114.2 bits), Expect = 2.6e-39, Sum P(2) = 2.6e-39
Identities = 75/202 (37%), Positives = 110/202 (54%)
Query: 234 EPDYLDATLITIFQVH--LDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 291
+ D +D LI H L+E G ILVFL G + I ++ L+ +++ S + + +
Sbjct: 447 DDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDRFIII 503
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
P+ S +P+ Q +VF G RK+++ATNIAETS+TI + +VID G +K +D
Sbjct: 504 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNN 563
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 411
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L + LQ
Sbjct: 564 ISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQ 623
Query: 412 LKALGVDDIIGF--DFMEKPSR 431
+K L + I F M+ PSR
Sbjct: 624 IKILKLGGIAYFLSKLMDPPSR 645
Score = 149 (57.5 bits), Expect = 2.6e-39, Sum P(2) = 2.6e-39
Identities = 44/146 (30%), Positives = 66/146 (45%)
Query: 19 EKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVTQPXXXXXXX 74
++ LV + N + +I GETG GKTTQ+ QF+ + GK I TQP
Sbjct: 194 KQELVNLINNNRVTVISGETGCGKTTQVTQFILD-DYIERGKGSTCRIVCTQPRRISAIS 252
Query: 75 XXXXXXEESGVELG--QRVGYSIRFDDRT----------STSTRIKEALLDPYLSRYSAI 122
E G + GY IR R +T ++ D +LS S +
Sbjct: 253 VAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHV 312
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNAR 148
++DE HER + +DVL+ ++K + N R
Sbjct: 313 VLDEIHERNLQSDVLMSIIKDLLNVR 338
Score = 96 (38.9 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LK+I+MSA+L+A FSEYF +H+ G FPV + Y L D ++ T + D
Sbjct: 341 LKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPV-VEYLL---EDVIEKLRYT--PENTD 394
Query: 252 EAPGDILVFLTG---QEEIESVERLVQERLLQLPEASRKL 288
P F+ G + E E E + +ER PE R+L
Sbjct: 395 RRPRWKKGFMQGHISRPEKEEKEEIYRERW---PEYLRQL 431
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 261 (96.9 bits), Expect = 6.4e-39, Sum P(3) = 6.4e-39
Identities = 69/188 (36%), Positives = 100/188 (53%)
Query: 236 DYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
+ L+A L+ I ++ PG ILVFL G I ++ + +Q + + S+ + +P S
Sbjct: 638 ELLEALLMHIKSKNI---PGAILVFLPGWNLIFALMKFLQNTNI-FGDTSQYQI-LPCHS 692
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
+P ++Q +VF P G K+IL+TNIAETS+TI I +VID + +L+ + S
Sbjct: 693 QIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSY 752
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKAL 415
V SK QR GRAGR PG CF L F LED+ PE+ R L + L +K L
Sbjct: 753 ATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLL 812
Query: 416 GVDDIIGF 423
+ I F
Sbjct: 813 RLGSIHHF 820
Score = 181 (68.8 bits), Expect = 6.4e-39, Sum P(3) = 6.4e-39
Identities = 51/150 (34%), Positives = 76/150 (50%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC--RDGKL 61
++ L+ R+ LPIA++ ++ + N ++II G TG GKTTQ+ Q++ C + G
Sbjct: 375 RQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYA 434
Query: 62 -IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTS-----TSTRIKEALL 112
I VTQP E +LG VGYS+RF+ R + + L
Sbjct: 435 NIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL 494
Query: 113 DPYLSRYSAIIVDEAHERTVHTDVLLGLLK 142
+ L S IIVDE HER V++D LL +L+
Sbjct: 495 EAGLRGVSHIIVDEIHERDVNSDFLLVILR 524
Score = 91 (37.1 bits), Expect = 6.4e-39, Sum P(3) = 6.4e-39
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 189 FAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
+ L +I+MSA++D FS+YFG + V GR FPV+
Sbjct: 530 YPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQ 567
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 279 (103.3 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 71/189 (37%), Positives = 98/189 (51%)
Query: 231 LYPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESV-ERLVQERLLQLPE 283
LY P ++ LI V+LD++P G +L+FL G I+ + + L +R
Sbjct: 837 LYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFY--- 893
Query: 284 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 343
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 894 -SERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 952
Query: 344 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 403
Y M SL+ +SKA ALQR GRAGR G CFRLY F+ D + PEI R
Sbjct: 953 NKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLDYSVPEILRV 1012
Query: 404 NLSNVILQL 412
L + L +
Sbjct: 1013 PLEELCLHI 1021
Score = 157 (60.3 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 39/113 (34%), Positives = 58/113 (51%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH---AGFCRDGK 60
Q++L++R+ LP+ +VE ++++ ++++ GETGSGK+TQ+P FL C K
Sbjct: 562 QRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARK 621
Query: 61 L-IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 107
I TQP EE G E G GY IR + R S STR+
Sbjct: 622 CNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRL 674
Score = 115 (45.5 bits), Expect = 2.6e-34, Sum P(3) = 2.6e-34
Identities = 37/99 (37%), Positives = 46/99 (46%)
Query: 65 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 112
TQP EE G E G GY IR + R S STR+ LL
Sbjct: 627 TQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 686
Query: 113 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 687 QEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRS 725
Score = 88 (36.0 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+K + L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 722 QKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH 764
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 231 (86.4 bits), Expect = 1.4e-38, Sum P(4) = 1.4e-38
Identities = 54/129 (41%), Positives = 72/129 (55%)
Query: 304 RVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 363
+VF G RK+++ATNIAETS+TI + YVID G +K +D + ++ +SKA
Sbjct: 521 QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 580
Query: 364 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF 423
A QR GRAGR PG C+ LY L+D PEI R L + LQ+K L + I F
Sbjct: 581 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF 640
Query: 424 --DFMEKPS 430
M+ PS
Sbjct: 641 LSRLMDPPS 649
Score = 176 (67.0 bits), Expect = 1.4e-38, Sum P(4) = 1.4e-38
Identities = 51/156 (32%), Positives = 72/156 (46%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 65
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCT 262
Query: 66 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 113
QP E G GY IR R +T ++ D
Sbjct: 263 QPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 322
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
PYLS S I++DE HER + +DVL+ ++K + N RS
Sbjct: 323 PYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS 358
Score = 99 (39.9 bits), Expect = 1.4e-38, Sum P(4) = 1.4e-38
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 231
LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 360 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 398
Score = 64 (27.6 bits), Expect = 1.4e-38, Sum P(4) = 1.4e-38
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 234 EPDYLDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLL 279
E D +D LI I + L+E G ILVFL G + I ++ L+ +++
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM 513
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 271 (100.5 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 68/188 (36%), Positives = 96/188 (51%)
Query: 232 YPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESVERLVQ-ERLLQLPEA 284
Y P ++ LI +LD +P G +L+FL G I+ + L+ +R L +
Sbjct: 840 YMNPYKINLELILELLAYLDRSPQFKNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLCDR 899
Query: 285 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKAR 344
R + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 900 HR---LIALHSVLSTQDQAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKEN 956
Query: 345 LYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCN 404
Y M SL +SKA ALQR GRAGR G CFR+Y + F+ + + PEI R
Sbjct: 957 RYHESSQMSSLEETFVSKASALQRQGRAGRVRDGFCFRMYTRDRFESFMEYSVPEILRVP 1016
Query: 405 LSNVILQL 412
L + L +
Sbjct: 1017 LEELCLHI 1024
Score = 162 (62.1 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 39/112 (34%), Positives = 57/112 (50%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
QK L++R+ LP+ +VE ++K+ ++++ GETGSGK+TQ+P FL +G
Sbjct: 565 QKFLKERQELPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKC 624
Query: 62 -IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 107
I TQP EE G E G GY IR + RT +TR+
Sbjct: 625 NIVCTQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRL 676
Score = 126 (49.4 bits), Expect = 7.8e-35, Sum P(3) = 7.8e-35
Identities = 38/99 (38%), Positives = 48/99 (48%)
Query: 65 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 112
TQP EE G E G GY IR + RT +TR+ LL
Sbjct: 629 TQPRRISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRKL 688
Query: 113 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
D LS S +IVDE HER+VH+D LL +LK++ + RS
Sbjct: 689 QEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRS 727
Score = 94 (38.1 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 188 KFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDAT 241
K + L LI+MSA++D+ FS YF + + GR +PVE+ + D ++AT
Sbjct: 725 KRSDLHLILMSATVDSEKFSSYFAHCPILRISGRSYPVEVFHV----EDVIEAT 774
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 274 (101.5 bits), Expect = 4.3e-38, Sum P(2) = 4.3e-38
Identities = 68/168 (40%), Positives = 90/168 (53%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIFSSLPSEQQMRVFAPAAAG 312
PG +LVFL G I ++ Q+ L P + + +P+ S +P E+Q +VF P AG
Sbjct: 642 PGAVLVFLPGWNLIYTM----QKHLEMNPHFGNHRYQILPLHSQIPREEQRKVFDPVPAG 697
Query: 313 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 372
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRA
Sbjct: 698 VTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRA 757
Query: 373 GREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
GR PG CF L FD+LE PE+ R L + L +K L + I
Sbjct: 758 GRVRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIKLLRLGGI 805
Score = 207 (77.9 bits), Expect = 4.3e-38, Sum P(2) = 4.3e-38
Identities = 56/156 (35%), Positives = 82/156 (52%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
Q ILQ+R+ LP+ E ++E + +N ++I+ G TG GKTTQ+PQF+ F ++ +
Sbjct: 375 QAILQERELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILD-DFIQNDRAAE 433
Query: 62 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL-- 111
I VTQP E G E G+ GYS+RF+ R S + L
Sbjct: 434 CNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 493
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 147
L+ + S +IVDE HER ++TD LL +L+ V A
Sbjct: 494 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQA 529
Score = 79 (32.9 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 166 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 225
D I +R +T+ + + + + + +++++MSA++D F EYF + V GR +PV
Sbjct: 507 DEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPV 566
Query: 226 E 226
+
Sbjct: 567 Q 567
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 275 (101.9 bits), Expect = 6.4e-38, Sum P(3) = 6.4e-38
Identities = 70/189 (37%), Positives = 98/189 (51%)
Query: 231 LYPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESV-ERLVQERLLQLPE 283
LY P ++ LI V+LD++P G +L+FL G I+ + + L +R
Sbjct: 838 LYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFY--- 894
Query: 284 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 343
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 895 -SERYQLIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 953
Query: 344 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 403
Y M SL+ +SKA ALQR GRAGR G CFRLY F+ + + PEI R
Sbjct: 954 NKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLEYSVPEILRV 1013
Query: 404 NLSNVILQL 412
L + L +
Sbjct: 1014 PLEELCLHI 1022
Score = 156 (60.0 bits), Expect = 6.4e-38, Sum P(3) = 6.4e-38
Identities = 39/113 (34%), Positives = 58/113 (51%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH---AGFCRDGK 60
Q++L++R+ LP+ +VE ++++ ++++ GETGSGK+TQ+P FL C K
Sbjct: 563 QRLLKERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARK 622
Query: 61 L-IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 107
I TQP EE G E G GY IR + R S STR+
Sbjct: 623 CNIVCTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRL 675
Score = 113 (44.8 bits), Expect = 1.9e-33, Sum P(3) = 1.9e-33
Identities = 37/99 (37%), Positives = 46/99 (46%)
Query: 65 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 112
TQP EE G E G GY IR + R S STR+ LL
Sbjct: 628 TQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 687
Query: 113 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 688 QEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRS 726
Score = 88 (36.0 bits), Expect = 6.4e-38, Sum P(3) = 6.4e-38
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+K + L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 723 QKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH 765
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 275 (101.9 bits), Expect = 6.7e-38, Sum P(2) = 6.7e-38
Identities = 68/168 (40%), Positives = 91/168 (54%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIFSSLPSEQQMRVFAPAAAG 312
PG +LVFL G I ++ Q+ L P+ S + +P+ S +P E+Q +VF P AG
Sbjct: 651 PGAVLVFLPGWNLIYTM----QKHLEMNPDFGSHRYQILPLHSQIPREEQRKVFDPVPAG 706
Query: 313 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 372
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRA
Sbjct: 707 VTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRA 766
Query: 373 GREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
GR PG CF L F++LE PE+ R L + L +K L + I
Sbjct: 767 GRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGI 814
Score = 204 (76.9 bits), Expect = 6.7e-38, Sum P(2) = 6.7e-38
Identities = 56/154 (36%), Positives = 81/154 (52%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL---- 61
ILQ+R+ LP+ E ++E + +N ++II G TG GKTTQ+PQF+ F ++ +
Sbjct: 382 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILD-DFIQNDRAAECN 440
Query: 62 IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL--LD 113
I VTQP E G E G+ GYS+RF+ R S + L L+
Sbjct: 441 IVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKLE 500
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 147
+ S +IVDE HER ++TD LL +L+ V A
Sbjct: 501 AGIRGISHVIVDEIHERDINTDFLLVVLRDVVQA 534
Score = 79 (32.9 bits), Expect = 8.3e-25, Sum P(2) = 8.3e-25
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 166 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 225
D I +R +T+ + + + + + +++++MSA++D F EYF + V GR +PV
Sbjct: 512 DEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPV 571
Query: 226 E 226
+
Sbjct: 572 Q 572
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 276 (102.2 bits), Expect = 8.7e-38, Sum P(3) = 8.7e-38
Identities = 69/189 (36%), Positives = 97/189 (51%)
Query: 231 LYPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESVERLVQ-ERLLQLPE 283
LY P ++ LI ++LD +P G +L+FL G I+ + L+ +R
Sbjct: 835 LYMNPHKINLDLILELLIYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRF---- 890
Query: 284 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 343
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 891 FSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 950
Query: 344 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 403
Y M SL+ +SKA ALQR GRAGR G CFR+Y F+ D + PEI R
Sbjct: 951 NKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRV 1010
Query: 404 NLSNVILQL 412
L + L +
Sbjct: 1011 PLEELCLHI 1019
Score = 151 (58.2 bits), Expect = 8.7e-38, Sum P(3) = 8.7e-38
Identities = 37/113 (32%), Positives = 58/113 (51%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD---GK 60
Q++L++R+ LP+ +VE ++++ ++++ GETGSGK+TQ+P FL + K
Sbjct: 560 QRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSK 619
Query: 61 L-IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 107
I TQP +E G E G GY IR + R S STR+
Sbjct: 620 CNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRL 672
Score = 112 (44.5 bits), Expect = 9.8e-34, Sum P(3) = 9.8e-34
Identities = 36/99 (36%), Positives = 46/99 (46%)
Query: 65 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 112
TQP +E G E G GY IR + R S STR+ LL
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 684
Query: 113 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 685 QEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 723
Score = 90 (36.7 bits), Expect = 8.7e-38, Sum P(3) = 8.7e-38
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+K + L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 720 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 762
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 267 (99.0 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 75/248 (30%), Positives = 127/248 (51%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKLI+ + L S Y+G + V+ + PVE++Y + D ++ + IF++H
Sbjct: 211 LKLIVNCSPLLTSKLSSYYGDVPVIEVRNKH-PVEVVYLSGAQKDSFESVIRLIFEIHRS 269
Query: 252 EAPGDILVFLTGQEEIESVERLV-QERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPA- 309
GD++VFL +++IE LV QE P+ LV +P++ P E+ +F P
Sbjct: 270 GEKGDVVVFLACEQDIEKTYELVCQEGSNLNPDVG-DLVVIPLY---PKEK-CSLFRPVD 324
Query: 310 ------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 363
R+V+L T+ E+ + +K+VID G + ++Y+P SL++ PIS++
Sbjct: 325 ETEKRCQVYQRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQS 384
Query: 364 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKP-EIKRCNLSNVILQLKALGVDDIIG 422
QA R G GK F LY E K KP E++ NL++++L +K + + +
Sbjct: 385 QAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGR 444
Query: 423 FDFMEKPS 430
DFM +P+
Sbjct: 445 CDFMNRPA 452
Score = 205 (77.2 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 52/158 (32%), Positives = 87/158 (55%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC-----RDG 59
K+L++R+ LPI + +E + +N ++++ G++ GK++Q+PQ+ A +C + G
Sbjct: 54 KLLKEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWC--AEYCLSIHYQHG 111
Query: 60 KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EA 110
+I TQ +E V +G VGY I F++ +T T ++ E
Sbjct: 112 GVI-CTQAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREM 170
Query: 111 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+ +P+L Y II+D+ HER++ TDVLLGLLK V AR
Sbjct: 171 MSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLAR 208
Score = 39 (18.8 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 282 PEASRKLVTVPIFSSLPSEQQMRVFAPAA 310
PE +LV FS+LP + + AA
Sbjct: 687 PELFMQLVPQYYFSNLPPSESKDILQQAA 715
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 275 (101.9 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 64/177 (36%), Positives = 98/177 (55%)
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
++ L + G IL+FL G EI R + + L +P+ +SL +++Q +VF
Sbjct: 880 ELSLAQKSGGILIFLPGVAEIN--------RACGMLRSLNCLHVLPLHASLETKEQRKVF 931
Query: 307 APAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQAL 366
P +G RKV++ATN+AETS+TI I V+D G VK YD M L S A
Sbjct: 932 VPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACK 991
Query: 367 QRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF 423
QR GRAGR G+C++LY ++ + +PE++R L + L ++A+G+ D+ GF
Sbjct: 992 QRRGRAGRVQAGECYKLYTRKLESQMAERPEPEMRRVPLEQLCLSVRAMGIADVRGF 1048
Score = 158 (60.7 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 40/108 (37%), Positives = 56/108 (51%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQF----LFHAGFCRDG 59
+K+L QR+ LP + +V V ++ + II GETGSGK+TQ QF L+ G
Sbjct: 624 RKMLGQRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAA 683
Query: 60 KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRI 107
++ VTQP +E ++GQ VGY IR + RT TRI
Sbjct: 684 NIL-VTQPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRI 730
Score = 84 (34.6 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 130 RTVHTDVLLG-LLKKVQNARSKSADG-HSXXXXXXXXSDMILDRGNDTNGINTLKQCQGR 187
+T T V G LL+++Q + + D S D + +R DT+ + ++ + +
Sbjct: 727 KTRITFVTTGVLLRRLQVSGGRVEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLK 786
Query: 188 KFAPLKLIIMSASLDARGFSEYF---GCAKA-VHVQGRQFPVEILY 229
+ LKL++MSA+LD+ F+ YF G V + GR FPV Y
Sbjct: 787 QRRDLKLVLMSATLDSATFASYFVQDGIRVGQVEIAGRTFPVTDYY 832
Score = 72 (30.4 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
L+ S +++DE HER++ TD LL +++ V R
Sbjct: 756 LADVSHVVIDEVHERSLDTDFLLSIIRDVLKQR 788
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 271 (100.5 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 69/186 (37%), Positives = 100/186 (53%)
Query: 236 DYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIF 294
+ ++A L+ I +++ PG +LVFL G I ++ Q+ L P S + +P+
Sbjct: 632 ELIEALLLYIETLNV---PGAVLVFLPGWNLIYTM----QKHLEMNPHFGSHRYQILPLH 684
Query: 295 SSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMES 354
S +P E+Q +VF P +G K+IL+TNIAETS+TI + YVID K +L+ M +
Sbjct: 685 SQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTN 744
Query: 355 LLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKA 414
V SK QR GRAGR PG CF L F++LE PE+ R L + L +K
Sbjct: 745 YATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKL 804
Query: 415 LGVDDI 420
L + I
Sbjct: 805 LRLGGI 810
Score = 206 (77.6 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 56/155 (36%), Positives = 79/155 (50%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
Q +LQ+R+ LP+ E ++E + +N ++II G TG GKTTQ+PQF+ D
Sbjct: 376 QAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAEC 435
Query: 62 -IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL--L 112
I VTQP E G E G+ GYS+RF+ R S + L L
Sbjct: 436 NIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL 495
Query: 113 DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 147
+ + S +IVDE HER ++TD LL +L+ V A
Sbjct: 496 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQA 530
Score = 82 (33.9 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 166 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 225
D I +R +T+ + + + + + +++++MSA++D F EYF + V GR FPV
Sbjct: 508 DEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPV 567
Query: 226 E 226
+
Sbjct: 568 Q 568
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 271 (100.5 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 69/186 (37%), Positives = 100/186 (53%)
Query: 236 DYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIF 294
+ ++A L+ I +++ PG +LVFL G I ++ Q+ L P S + +P+
Sbjct: 632 ELIEALLLYIETLNV---PGAVLVFLPGWNLIYTM----QKHLEMNPHFGSHRYQILPLH 684
Query: 295 SSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMES 354
S +P E+Q +VF P +G K+IL+TNIAETS+TI + YVID K +L+ M +
Sbjct: 685 SQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTN 744
Query: 355 LLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKA 414
V SK QR GRAGR PG CF L F++LE PE+ R L + L +K
Sbjct: 745 YATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKL 804
Query: 415 LGVDDI 420
L + I
Sbjct: 805 LRLGGI 810
Score = 206 (77.6 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 56/155 (36%), Positives = 79/155 (50%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
Q +LQ+R+ LP+ E ++E + +N ++II G TG GKTTQ+PQF+ D
Sbjct: 376 QAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAEC 435
Query: 62 -IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL--L 112
I VTQP E G E G+ GYS+RF+ R S + L L
Sbjct: 436 NIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL 495
Query: 113 DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 147
+ + S +IVDE HER ++TD LL +L+ V A
Sbjct: 496 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQA 530
Score = 82 (33.9 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 166 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 225
D I +R +T+ + + + + + +++++MSA++D F EYF + V GR FPV
Sbjct: 508 DEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTFPV 567
Query: 226 E 226
+
Sbjct: 568 Q 568
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 269 (99.8 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 67/168 (39%), Positives = 89/168 (52%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIFSSLPSEQQMRVFAPAAAG 312
PG +LVFL G I ++ Q+ L P S + +P+ S +P E+Q +VF P G
Sbjct: 650 PGAVLVFLPGWNLIYTM----QKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVG 705
Query: 313 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 372
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRA
Sbjct: 706 VTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRA 765
Query: 373 GREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
GR PG CF L F++LE PE+ R L + L +K L + I
Sbjct: 766 GRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGI 813
Score = 208 (78.3 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 57/156 (36%), Positives = 82/156 (52%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
Q ILQ+R+ LP+ E ++E + +N ++II G TG GKTTQ+PQF+ F ++ +
Sbjct: 379 QAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILD-DFIQNDRAAE 437
Query: 62 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL-- 111
I VTQP E G E G+ GYS+RF+ R S + L
Sbjct: 438 CNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 497
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 147
L+ + S +IVDE HER ++TD LL +L+ V A
Sbjct: 498 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQA 533
Score = 79 (32.9 bits), Expect = 5.2e-24, Sum P(2) = 5.2e-24
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 166 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 225
D I +R +T+ + + + + + +++++MSA++D F EYF + V GR +PV
Sbjct: 511 DEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPV 570
Query: 226 E 226
+
Sbjct: 571 Q 571
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 269 (99.8 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 67/168 (39%), Positives = 89/168 (52%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIFSSLPSEQQMRVFAPAAAG 312
PG +LVFL G I ++ Q+ L P S + +P+ S +P E+Q +VF P G
Sbjct: 650 PGAVLVFLPGWNLIYTM----QKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVG 705
Query: 313 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 372
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRA
Sbjct: 706 VTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRA 765
Query: 373 GREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
GR PG CF L F++LE PE+ R L + L +K L + I
Sbjct: 766 GRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGI 813
Score = 208 (78.3 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
Identities = 57/156 (36%), Positives = 82/156 (52%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
Q ILQ+R+ LP+ E ++E + +N ++II G TG GKTTQ+PQF+ F ++ +
Sbjct: 379 QAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILD-DFIQNDRAAE 437
Query: 62 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTSTR---IKEAL-- 111
I VTQP E G E G+ GYS+RF+ R S + L
Sbjct: 438 CNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRK 497
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 147
L+ + S +IVDE HER ++TD LL +L+ V A
Sbjct: 498 LEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQA 533
Score = 79 (32.9 bits), Expect = 5.2e-24, Sum P(2) = 5.2e-24
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 166 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 225
D I +R +T+ + + + + + +++++MSA++D F EYF + V GR +PV
Sbjct: 511 DEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPV 570
Query: 226 E 226
+
Sbjct: 571 Q 571
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 276 (102.2 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 69/189 (36%), Positives = 97/189 (51%)
Query: 231 LYPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESV-ERLVQERLLQLPE 283
LY P ++ LI +LD++P G +L+FL G I+ + + L +R
Sbjct: 838 LYMNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFY--- 894
Query: 284 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 343
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 895 -SERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 953
Query: 344 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 403
Y M SL+ +SKA ALQR GRAGR G CFR+Y F+ D + PEI R
Sbjct: 954 NKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRV 1013
Query: 404 NLSNVILQL 412
L + L +
Sbjct: 1014 PLEELCLHI 1022
Score = 148 (57.2 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 36/113 (31%), Positives = 57/113 (50%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
QK+L++R+ LP+ +VE ++++ ++++ GETGSGK+TQ+P FL + +
Sbjct: 563 QKLLKERQQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASK 622
Query: 62 --IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 107
I TQP +E G E G GY IR + R STR+
Sbjct: 623 CNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRL 675
Score = 109 (43.4 bits), Expect = 2.0e-33, Sum P(3) = 2.0e-33
Identities = 36/99 (36%), Positives = 45/99 (45%)
Query: 65 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 112
TQP +E G E G GY IR + R STR+ LL
Sbjct: 628 TQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKL 687
Query: 113 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
D LS S +IVDE HER+V +D LL +LK++ RS
Sbjct: 688 QEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 726
Score = 90 (36.7 bits), Expect = 1.8e-37, Sum P(3) = 1.8e-37
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+K + L LI+MSA++D+ FS YF + + GR +PVE+ +
Sbjct: 723 QKRSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 765
>UNIPROTKB|B0V0F7 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 PROSITE:PS00690
GO:GO:0005524 GO:GO:0003676 eggNOG:COG1643 GO:GO:0008026
HGNC:HGNC:2739 EMBL:CR759873 IPI:IPI00894447 SMR:B0V0F7
Ensembl:ENST00000456005 UCSC:uc011elj.1 Uniprot:B0V0F7
Length = 188
Score = 318 (117.0 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 59/129 (45%), Positives = 90/129 (69%)
Query: 188 KFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIF 246
+F P LK+++ SA++D FS +F A + GR+FPV+I YT PE DYL+A ++++
Sbjct: 60 RFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL 119
Query: 247 QVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVF 306
Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI+++LPS+ Q R+F
Sbjct: 120 QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF 179
Query: 307 APAAAGFRK 315
P G RK
Sbjct: 180 QPTPPGARK 188
Score = 99 (39.9 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
S+ ++VDEAHERT+HTD+L GL+K V R
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFR 62
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 250 (93.1 bits), Expect = 2.5e-37, Sum P(3) = 2.5e-37
Identities = 64/204 (31%), Positives = 106/204 (51%)
Query: 234 EPDYLDATLITIFQVHL-----DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKL 288
+ D +D +I VH+ + IL+FL G E+I L++ + E +
Sbjct: 924 QSDDVDHEMILQLIVHIVTKVSSTSEDSILIFLPGWEDISQTRELMRRHPMLRNE--NEF 981
Query: 289 VTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDP 348
+ +P+ SS+ + Q +VF RK++L+TNIAETS+TI + YVID VK + ++
Sbjct: 982 LILPLHSSVSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHET 1041
Query: 349 VKGMESLLVVPISKAQALQRSGRAGR-EGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSN 407
+ + V K+ QR GRAGR G C+ + + ++ LE+ E++R L
Sbjct: 1042 QRDLTLFQTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNTLEEFQLSEMRRMPLHE 1101
Query: 408 VILQLKALGVDDIIGF--DFMEKP 429
+ LQ+K L + D+IGF + +E P
Sbjct: 1102 LCLQVKVLVLGDVIGFLSEALEPP 1125
Score = 223 (83.6 bits), Expect = 2.5e-37, Sum P(3) = 2.5e-37
Identities = 57/158 (36%), Positives = 79/158 (50%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLF-------HAGFC 56
++I Q+R LPI L+E ++ N I+II+G+TG GKTTQ+PQF+ HA +C
Sbjct: 708 KRIYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYC 767
Query: 57 RDGKLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTR---------- 106
I +TQP E ++G VGY IRFD+ T
Sbjct: 768 N----IVMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGIL 823
Query: 107 IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKV 144
+K D L S + +DE HER +HTD LL +LKK+
Sbjct: 824 LKRMYSDMKLHNVSHLFIDEVHERDIHTDFLLIILKKL 861
Score = 50 (22.7 bits), Expect = 2.5e-37, Sum P(3) = 2.5e-37
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAV 216
L++I+MSA++D S YFG +
Sbjct: 868 LRVILMSATMDNSLVSAYFGTCPVI 892
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 274 (101.5 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 88/312 (28%), Positives = 143/312 (45%)
Query: 122 IIVDEAHERTVHTDVLL----GLLKKVQNARSKSADGHSXXXXXXXXSDMILDRGNDTNG 177
+ VD H T T +++ G L +V+ S A H D G T
Sbjct: 407 VSVDYRHSETSATALMIASGRGFLSQVEQLISMGASVHCKSSNGWMALDWAKHFGQ-TEV 465
Query: 178 INTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDY 237
++ L+ A ++ S +LD + G + + R+ ++ E
Sbjct: 466 VDLLESYS----ASME----SGNLDESSLVQASG--NDLGAEDRELLKAYHHSFDDEKVD 515
Query: 238 LDATLITIFQVHLDEAPGDILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFSS 296
LD + ++ + G IL+FL G +EI S+ +R++ + + A K + S+
Sbjct: 516 LDLIMHLLYNICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSN 575
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
+ + Q V +G RK+IL+TNIAETS+T+ + +VID G +K + +D + + L
Sbjct: 576 MQTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLK 635
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 416
V ISKA A+QR GRAGR PG CF L+ F + + PE++R L + L K L
Sbjct: 636 TVWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLEFQTPELRRMPLQELCLHTKLLA 695
Query: 417 VDDIIGFDFMEK 428
+ DF+ K
Sbjct: 696 PVNCPVVDFLMK 707
Score = 199 (75.1 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 55/151 (36%), Positives = 80/151 (52%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL---IGVTQ 66
R+SLP+ ++ +V+ +++N +++IVGETGSGKTTQ+PQFL C + + I TQ
Sbjct: 100 RQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDD--CYENGVPCRIFCTQ 157
Query: 67 PXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---EALL-------DPYL 116
P E ++GQ VGY IR + R S T + +L D L
Sbjct: 158 PRRLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSAL 217
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKV-QN 146
S + +IVDE HER +D LL L+ + QN
Sbjct: 218 STVTHVIVDEVHERDRFSDFLLIKLRDILQN 248
Score = 102 (41.0 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
LKLII SA+LDA F +YFG +H+QGR F V+ ++
Sbjct: 252 LKLIISSAALDANLFIKYFGSCPVIHIQGRPFEVKEMF 289
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 232 (86.7 bits), Expect = 3.6e-37, Sum P(4) = 3.6e-37
Identities = 54/129 (41%), Positives = 72/129 (55%)
Query: 304 RVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 363
+VF G RK+++ATNIAETS+TI + YVID G +K +D + ++ +SKA
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 574
Query: 364 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF 423
A QR GRAGR PG C+ LY L+D PEI R L + LQ+K L + I F
Sbjct: 575 NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF 634
Query: 424 --DFMEKPS 430
M+ PS
Sbjct: 635 LSRLMDPPS 643
Score = 160 (61.4 bits), Expect = 3.6e-37, Sum P(4) = 3.6e-37
Identities = 48/155 (30%), Positives = 70/155 (45%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 65
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 198 REKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYIERGKGSACRIVCT 256
Query: 66 QPXXXXXXXXXXXXXEESGVELGQ--RVGYSIRFDDRT----------STSTRIKEALLD 113
QP E G GY IR R +T ++ D
Sbjct: 257 QPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 316
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+LS S I++DE HER + +DVL+ ++K + N R
Sbjct: 317 SHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFR 351
Score = 102 (41.0 bits), Expect = 3.6e-37, Sum P(4) = 3.6e-37
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 189 FAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 231
F P LK+I+MSA+L+A FSEYFG +H+ G FPV + Y L
Sbjct: 350 FRPDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV-VEYLL 392
Score = 62 (26.9 bits), Expect = 3.6e-37, Sum P(4) = 3.6e-37
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 234 EPDYLDATLITIFQVH--LDEAPGDILVFLTGQEEIESVERLVQERLL 279
+ D +D LI H L+E G ILVFL G + I ++ L+ +++
Sbjct: 460 DDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM 507
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 273 (101.2 bits), Expect = 4.0e-37, Sum P(3) = 4.0e-37
Identities = 69/189 (36%), Positives = 96/189 (50%)
Query: 231 LYPEPDYLDATLITIFQVHLDEAP------GDILVFLTGQEEIESVERLVQ-ERLLQLPE 283
LY P ++ LI +LD +P G +L+FL G I+ + L+ +R
Sbjct: 835 LYMNPHKINLDLILELLTYLDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRF---- 890
Query: 284 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 343
S + + + S L ++ Q F G RK++LATNIAET +TIP + +VID G K
Sbjct: 891 FSERYKVIALHSILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKE 950
Query: 344 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 403
Y M SL+ +SKA ALQR GRAGR G CFR+Y F+ D + PEI R
Sbjct: 951 NKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRV 1010
Query: 404 NLSNVILQL 412
L + L +
Sbjct: 1011 PLEELCLHI 1019
Score = 150 (57.9 bits), Expect = 4.0e-37, Sum P(3) = 4.0e-37
Identities = 37/113 (32%), Positives = 58/113 (51%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD-GKL- 61
Q++L++R+ LP+ +VE ++++ ++++ GETGSGK+TQ+P FL + G
Sbjct: 560 QRLLKERQQLPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTTK 619
Query: 62 --IGVTQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI 107
I TQP +E G E G GY IR + R S STR+
Sbjct: 620 CNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRL 672
Score = 112 (44.5 bits), Expect = 3.5e-33, Sum P(3) = 3.5e-33
Identities = 36/99 (36%), Positives = 46/99 (46%)
Query: 65 TQPXXXXXXXXXXXXXEESGVELG-----QRVGYSIRFDDRTSTSTRI----KEALL--- 112
TQP +E G E G GY IR + R S STR+ LL
Sbjct: 625 TQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKL 684
Query: 113 --DPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARS 149
D L+ S +IVDE HER+V +D LL +LK++ RS
Sbjct: 685 QEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS 723
Score = 89 (36.4 bits), Expect = 4.0e-37, Sum P(3) = 4.0e-37
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 187 RKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
+K + L LI+MSA++D FS YF + + GR +PVE+ +
Sbjct: 720 QKRSDLHLILMSATVDCEKFSTYFTHCPILRISGRSYPVEVFH 762
Score = 38 (18.4 bits), Expect = 7.9e-32, Sum P(3) = 7.9e-32
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQ 145
S Y ++E E T++ G +KK Q
Sbjct: 778 SEYCQKFLEEEEEITINVTTKAGGIKKYQ 806
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 408 (148.7 bits), Expect = 5.4e-37, P = 5.4e-37
Identities = 129/435 (29%), Positives = 213/435 (48%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH-AGFCRDGKLI 62
+ I +R+SLPI + ++ ++++ +LII G TGSGK+TQLPQ++ A R I
Sbjct: 200 RNIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRAPVRI 259
Query: 63 GVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK--------EAL-LD 113
V+QP +E G G VGY+IR + + S++T + AL +D
Sbjct: 260 VVSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMD 319
Query: 114 P--YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSXXXXXXXXSDMILDR 171
+ + +I+DEAHER + TD LL L K++ ++ H D L+
Sbjct: 320 KKSFFKNTTHLIIDEAHERDLDTDFLL-LATKLELQKNP----HLRLVLMSATMD--LEA 372
Query: 172 GNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAV-HVQGRQFPVEILYT 230
++ G T+ +GR F + + + L G+ + K + G++ P E+L
Sbjct: 373 LSNYFGGGTVMDVEGRSFE-VSIYHLEDILSKTGYM-HPRMEKFLGKPTGKETPSELLAA 430
Query: 231 LYP-----EPDYLDATLITIFQVHLDEAP-GDILVFLTGQEEIESVERLVQERLLQLPEA 284
Y PD + ++++ ++ L + G ++V+L G ++ S+ ++ LP
Sbjct: 431 YYGGNTIVHPDIDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLES---SLPR- 486
Query: 285 SRKLVTVPIFSSLPSEQQMRVFAPAAAGFR-KVILATNIAETSVTIPGIKYVIDPGFVKA 343
++ + + S + + +Q +VF G R K+IL+TNI +TS+TIP + YVID G K
Sbjct: 487 -EQITIILLHSQVDNSEQRKVFR-TYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKM 544
Query: 344 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 403
+ YD L + IS+A A QR+GRAGR G C+RLY + ++ T PEI R
Sbjct: 545 KTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRR 604
Query: 404 NLSNVILQLKALGVD 418
L + L K D
Sbjct: 605 TLDEICLLTKLAAPD 619
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 272 (100.8 bits), Expect = 5.7e-37, Sum P(2) = 5.7e-37
Identities = 70/173 (40%), Positives = 89/173 (51%)
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIFSSLPSEQQMRVFAPAA 310
E PG +LVFL G I +Q+ L P + +P+ S +P E+Q RVF P
Sbjct: 654 EVPGAVLVFLPGWNLIY----FMQKHLEMNPHFGGHQYRILPLHSQIPREEQRRVFEPVP 709
Query: 311 AGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSG 370
G KVIL+TNIAETS+TI + +V+D K +L+ M + V SK QR G
Sbjct: 710 DGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKG 769
Query: 371 RAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGF 423
RAGR PG CF L F+KLE PEI R L V L +K L + I F
Sbjct: 770 RAGRVRPGFCFHLCSRARFEKLETHMTPEIFRTPLHEVALSIKLLRLGGIGNF 822
Score = 199 (75.1 bits), Expect = 5.7e-37, Sum P(2) = 5.7e-37
Identities = 53/156 (33%), Positives = 82/156 (52%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
Q IL +R LP+ + +++++ + N ++II G TG GKTTQ+PQ++ F + G+
Sbjct: 386 QTILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDE-FIKGGRASD 444
Query: 62 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTST---RIKEAL-- 111
I VTQP E G ++G+ GYS+RF+ R S + L
Sbjct: 445 CNIVVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRK 504
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 147
L+ + S +IVDE HER ++TD LL +L+ V A
Sbjct: 505 LESGIRGISHVIVDEIHERDINTDFLLVVLRDVVQA 540
Score = 78 (32.5 bits), Expect = 2.7e-24, Sum P(2) = 2.7e-24
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 166 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 225
D I +R +T+ + + + + + +++I+MSA++D F EYF + V GR PV
Sbjct: 518 DEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFNCPVIEVHGRAHPV 577
Query: 226 E 226
+
Sbjct: 578 Q 578
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 262 (97.3 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 74/248 (29%), Positives = 128/248 (51%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKLII + S Y+G + V+ + PVE++Y + D ++ + IF++H
Sbjct: 218 LKLIINCSPFLISRLSSYYGNVPLLEVRNKH-PVEVVYLSGAQKDPFESVVRLIFEIHRS 276
Query: 252 EAPGDILVFLTGQEEIESVERLV-QERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPA- 309
GD++VFL +++IE +V QE P+ +LV +P++ P E+ +F P
Sbjct: 277 GEQGDVVVFLACEQDIEKTYEIVCQEGSNLNPDVG-ELVVIPLY---PKEK-CSLFRPVD 331
Query: 310 ------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKA 363
A R+V+L T+ E+ + +++VID G + ++Y+P SL++ PIS++
Sbjct: 332 ETEKRCQASQRRVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANSLVLQPISQS 391
Query: 364 QALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKP-EIKRCNLSNVILQLKALGVDDIIG 422
QA R G GK F LY E K KP E++ NL++++L +K + + +
Sbjct: 392 QAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGR 451
Query: 423 FDFMEKPS 430
DFM +P+
Sbjct: 452 CDFMNRPA 459
Score = 203 (76.5 bits), Expect = 8.1e-37, Sum P(2) = 8.1e-37
Identities = 52/158 (32%), Positives = 87/158 (55%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC-----RDG 59
K+L++R+ LPI + +E + +N ++++ G++ GK++Q+PQ+ A +C + G
Sbjct: 61 KLLKEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWC--AEYCLSIHYQHG 118
Query: 60 KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EA 110
+I TQ +E V +G VGY I F++ +T T ++ E
Sbjct: 119 GVI-CTQVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREM 177
Query: 111 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+ +P+L Y II+D+ HER++ TDVLLGLLK V AR
Sbjct: 178 MSNPFLGSYGVIILDDVHERSLATDVLLGLLKDVLLAR 215
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 238 (88.8 bits), Expect = 8.1e-37, Sum P(3) = 8.1e-37
Identities = 59/166 (35%), Positives = 92/166 (55%)
Query: 257 ILVFLTGQEEIESV-ERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRK 315
ILVFL G EI ++ + L+ +R Q + + P+ S++ +E+Q F G RK
Sbjct: 970 ILVFLPGIAEIRTLNDLLLGDRSFQ-----QNWLVYPLHSTIATEEQEAAFLVPPHGMRK 1024
Query: 316 VILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGRE 375
++LATNIAET +TIP + VID G + +D + M L+ IS+A A QR GRAGR
Sbjct: 1025 IVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGRV 1084
Query: 376 GPGKCFRLYPENEFDKL-EDSTKPEIKRCNLSNVILQLKALGVDDI 420
G CF ++ + D + D PE+ R +L ++ +++K + I
Sbjct: 1085 QQGLCFHMFTKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGGI 1130
Score = 182 (69.1 bits), Expect = 8.1e-37, Sum P(3) = 8.1e-37
Identities = 54/165 (32%), Positives = 86/165 (52%)
Query: 2 PR-QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK 60
PR Q +L+ R LP+ + ++++ V ++ ++I+ GETG GK+TQ+P FL + GK
Sbjct: 679 PRYQNMLRSRMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQ-GK 737
Query: 61 LIGV--TQPXXXXXXXXXXXXXEESGV---ELGQR---VGYSIRFDDRTSTSTRIKEA-- 110
+ T+P EE G +LG VGYSIR + TS TR+ A
Sbjct: 738 ACKIYCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATT 797
Query: 111 -----LLDPY--LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+L+ L + +++DE HER++ +D LL +LKK+ R
Sbjct: 798 GIVMRMLEGSNDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRR 842
Score = 101 (40.6 bits), Expect = 8.1e-37, Sum P(3) = 8.1e-37
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 166 DMILDRGNDTNGIN-TLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFP 224
D + +R D++ + LK+ R+ LK+++MSA++DA FS Y A ++V GR FP
Sbjct: 819 DEVHERSIDSDFLLIVLKKLMTRR-KDLKVVLMSATVDADRFSNYLDGAPVLNVPGRTFP 877
Query: 225 VEILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIE 268
V++ + D ++ T TI Q + P + LV + E+E
Sbjct: 878 VQVNFL----EDAVELTGYTIDQ----KVPQERLVEIDEDAEVE 913
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 261 (96.9 bits), Expect = 8.5e-37, Sum P(2) = 8.5e-37
Identities = 75/247 (30%), Positives = 126/247 (51%)
Query: 192 LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLDATLITIFQVHLD 251
LKLII S+ S Y+G + V+ +Q PVE++Y + + L++ L IF++H
Sbjct: 211 LKLIINSSPHLISKLSSYYGNVPLIEVK-KQHPVEVVYLSGAQKESLESILRLIFEIHQS 269
Query: 252 EAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAP--- 308
GDI+VFL +++IE +V + L +LV VP++ P E+ +F P
Sbjct: 270 GEKGDIVVFLACEQDIEKAYEIVCQEGSNLNPDLGELVVVPLY---PKEK-CALFKPNDE 325
Query: 309 ----AAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQ 364
R+V+L + E+ + +++VID G + ++Y+P SL+ PIS++Q
Sbjct: 326 TEKRCQVYQRRVVLTASSGESLIWSNTVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQ 385
Query: 365 ALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKP-EIKRCNLSNVILQLKALGVDDIIGF 423
A R G GK F LY E K KP E++ NL++++L +K + + +
Sbjct: 386 AEIRKQILGSSSSGKLFCLYSEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGHC 445
Query: 424 DFMEKPS 430
DFM +P+
Sbjct: 446 DFMNRPA 452
Score = 204 (76.9 bits), Expect = 8.5e-37, Sum P(2) = 8.5e-37
Identities = 53/158 (33%), Positives = 85/158 (53%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC-----RDG 59
K+L++R+ LPI + +E + +N I+I+ G+ GK++Q+PQ+ A +C + G
Sbjct: 54 KLLKEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWC--AEYCLSIHYQHG 111
Query: 60 KLIGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDDRTSTSTRIK---------EA 110
++ TQ +E V +G VGY I F++ S+ T ++ E
Sbjct: 112 GVV-CTQVHKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSETILRYCTDDMLQREM 170
Query: 111 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNAR 148
+ P+L Y II+D+ HER++ TDVLLGLLK V AR
Sbjct: 171 MSSPFLGNYGVIILDDIHERSIATDVLLGLLKDVLLAR 208
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 274 (101.5 bits), Expect = 9.8e-37, Sum P(2) = 9.8e-37
Identities = 70/168 (41%), Positives = 89/168 (52%)
Query: 254 PGDILVFLTGQEEIESVERLVQERLLQLPE-ASRKLVTVPIFSSLPSEQQMRVFAPAAAG 312
PG +LVFL G I ++ Q+ L P S +P+ S +P ++Q +VF P G
Sbjct: 652 PGAVLVFLPGWNLIYAM----QKHLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDG 707
Query: 313 FRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRA 372
KVIL+TNIAETS+TI + YVID K +L+ M + V SK QR GRA
Sbjct: 708 IIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRA 767
Query: 373 GREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDI 420
GR PG CF L + FDKLE PEI R L V L +K L + I
Sbjct: 768 GRVRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIKLLRLGGI 815
Score = 194 (73.4 bits), Expect = 9.8e-37, Sum P(2) = 9.8e-37
Identities = 53/156 (33%), Positives = 82/156 (52%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-- 61
+++L R+SLP+ E+ ++ V + ++II G TG GKTTQ+PQ++ + R+ +
Sbjct: 381 KQVLIDRESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDE-YIRNDRAAQ 439
Query: 62 --IGVTQPXXXXXXXXXXXXXEESGVELGQRVGYSIRFDD---RTSTST---RIKEAL-- 111
I VTQP E G E+G+ GYS+RF+ R S + L
Sbjct: 440 CNIVVTQPRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRK 499
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNA 147
L+ + S +IVDE HER ++TD LL +L+ V A
Sbjct: 500 LESGIRGISHVIVDEIHERDINTDFLLVVLRDVIQA 535
Score = 86 (35.3 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 166 DMILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV 225
D I +R +T+ + + + + F +++I+MSA++D F EYF + V GR FPV
Sbjct: 513 DEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIEVFGRTFPV 572
Query: 226 EILY 229
+ Y
Sbjct: 573 QEYY 576
WARNING: HSPs involving 59 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 431 410 0.00079 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 309
No. of states in DFA: 576 (61 KB)
Total size of DFA: 208 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.63u 0.09s 31.72t Elapsed: 00:00:01
Total cpu time: 31.68u 0.10s 31.78t Elapsed: 00:00:01
Start: Tue May 21 05:18:22 2013 End: Tue May 21 05:18:23 2013
WARNINGS ISSUED: 2