Query 014086
Match_columns 431
No_of_seqs 394 out of 3075
Neff 10.3
Searched_HMMs 13730
Date Mon Mar 25 05:15:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014086.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014086hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 100.0 5.7E-33 4.2E-37 234.4 18.7 176 98-357 3-178 (183)
2 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 4.2E-22 3E-26 143.0 9.5 80 101-180 2-81 (82)
3 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 5.1E-22 3.7E-26 142.5 9.9 79 276-354 3-81 (82)
4 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 5.7E-22 4.2E-26 145.4 10.1 85 98-182 6-90 (93)
5 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 8.1E-22 5.9E-26 143.1 10.8 84 98-181 4-87 (88)
6 d1whwa_ d.58.7.1 (A:) Probable 99.9 2.9E-21 2.1E-25 143.7 13.8 84 274-357 7-90 (99)
7 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 5.3E-22 3.9E-26 144.5 9.5 83 275-357 5-87 (89)
8 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 2E-21 1.4E-25 142.5 11.9 83 275-357 9-91 (93)
9 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.9 1.1E-21 8.3E-26 140.7 10.2 81 98-179 3-83 (84)
10 d2cqca1 d.58.7.1 (A:109-191) A 99.9 9.8E-22 7.1E-26 141.2 9.8 79 97-175 5-83 (83)
11 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 1.3E-21 9.5E-26 142.0 10.4 82 274-355 6-87 (88)
12 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 1.3E-21 9.2E-26 140.5 10.1 79 276-354 3-81 (82)
13 d1cvja1 d.58.7.1 (A:11-90) Pol 99.9 1.3E-21 9.4E-26 139.3 9.8 77 103-179 2-78 (80)
14 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 6.4E-22 4.6E-26 144.1 8.3 83 99-181 3-85 (89)
15 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 2.1E-21 1.5E-25 142.4 11.1 82 99-180 5-86 (93)
16 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 1.2E-21 8.8E-26 142.9 9.7 83 274-356 7-89 (90)
17 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 2.3E-21 1.7E-25 139.1 11.0 80 101-180 2-81 (82)
18 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.8 2.5E-21 1.8E-25 141.9 11.0 82 274-355 6-87 (93)
19 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 1.7E-21 1.2E-25 138.7 9.7 78 277-354 2-79 (80)
20 d2cq0a1 d.58.7.1 (A:231-320) E 99.8 1.4E-21 1E-25 142.6 9.4 83 99-181 6-88 (90)
21 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 1.8E-21 1.3E-25 140.1 9.6 82 276-357 2-83 (85)
22 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.8 8.3E-21 6E-25 150.8 14.4 84 274-357 41-124 (139)
23 d2cpza1 d.58.7.1 (A:383-484) C 99.8 2.6E-21 1.9E-25 144.4 10.3 84 99-182 16-99 (102)
24 d2cqga1 d.58.7.1 (A:96-185) TA 99.8 3.2E-21 2.3E-25 139.9 10.3 82 98-181 5-86 (90)
25 d2cpza1 d.58.7.1 (A:383-484) C 99.8 3.2E-21 2.3E-25 144.0 10.4 85 274-358 17-101 (102)
26 d1whwa_ d.58.7.1 (A:) Probable 99.8 3E-21 2.2E-25 143.6 10.2 85 98-182 5-89 (99)
27 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.8 3.3E-21 2.4E-25 140.9 10.2 85 275-359 5-89 (90)
28 d2cpha1 d.58.7.1 (A:454-547) P 99.8 7.5E-21 5.5E-25 139.6 12.0 84 274-357 7-92 (94)
29 d1b7fa2 d.58.7.1 (A:205-289) S 99.8 4.7E-21 3.4E-25 138.2 10.6 80 99-178 4-85 (85)
30 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 1.4E-20 1E-24 140.7 13.3 82 275-357 10-91 (103)
31 d2cpha1 d.58.7.1 (A:454-547) P 99.8 5.4E-21 3.9E-25 140.4 10.4 85 98-182 5-91 (94)
32 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 2.6E-21 1.9E-25 139.2 8.4 80 102-181 2-81 (85)
33 d1fxla2 d.58.7.1 (A:119-203) H 99.8 7.3E-21 5.3E-25 137.0 10.3 79 100-178 5-85 (85)
34 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 1.2E-21 8.4E-26 137.9 5.9 76 102-178 1-76 (77)
35 d2cqga1 d.58.7.1 (A:96-185) TA 99.8 7.1E-21 5.2E-25 138.1 10.2 82 274-357 7-88 (90)
36 d1fxla2 d.58.7.1 (A:119-203) H 99.8 6.1E-21 4.4E-25 137.4 9.7 78 275-352 6-85 (85)
37 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 3.9E-21 2.8E-25 137.4 8.5 79 102-180 2-80 (81)
38 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 5.2E-21 3.8E-25 134.1 8.9 75 103-178 1-75 (75)
39 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 4.5E-21 3.3E-25 137.1 8.7 79 276-354 2-80 (81)
40 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 1.3E-20 9.1E-25 133.3 10.8 76 277-353 2-77 (78)
41 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.8 1.9E-20 1.4E-24 136.5 12.0 83 274-358 7-89 (90)
42 d1b7fa2 d.58.7.1 (A:205-289) S 99.8 8.7E-21 6.4E-25 136.8 9.8 78 275-352 6-85 (85)
43 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 9.5E-21 7E-25 133.9 9.8 76 103-179 2-77 (78)
44 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 3.4E-21 2.5E-25 143.0 7.5 80 101-181 18-97 (101)
45 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 8.6E-21 6.3E-25 136.3 9.2 80 278-357 1-81 (83)
46 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 8.8E-21 6.4E-25 141.2 9.5 83 275-358 20-102 (103)
47 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.8 8.3E-21 6E-25 138.7 9.1 83 99-181 3-85 (90)
48 d2cqca1 d.58.7.1 (A:109-191) A 99.8 1.3E-20 9.8E-25 135.2 10.0 76 274-349 8-83 (83)
49 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 1.3E-20 9.1E-25 140.4 9.4 80 101-181 20-99 (103)
50 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.8 1.2E-20 8.5E-25 149.9 9.9 84 98-181 39-122 (139)
51 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 5.6E-20 4.1E-24 134.7 12.8 81 274-356 10-90 (93)
52 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 2.5E-20 1.8E-24 133.6 10.5 79 274-353 5-83 (84)
53 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 7E-21 5.1E-25 143.0 7.9 81 101-181 8-88 (104)
54 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 1.7E-20 1.3E-24 131.4 9.4 75 277-352 1-75 (75)
55 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 1.3E-20 9.1E-25 136.1 8.8 78 278-355 1-81 (85)
56 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 2.2E-20 1.6E-24 139.6 10.1 82 99-181 8-89 (103)
57 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 2.2E-20 1.6E-24 143.0 10.4 105 98-207 4-108 (114)
58 d1x0fa1 d.58.7.1 (A:183-257) N 99.8 7.4E-21 5.4E-25 132.7 7.0 75 103-178 1-75 (75)
59 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 6.2E-21 4.5E-25 134.1 6.4 76 276-352 1-76 (77)
60 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 3.2E-20 2.3E-24 132.0 10.2 77 101-178 2-78 (79)
61 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.8 4.3E-20 3.1E-24 134.6 11.0 82 98-181 5-86 (90)
62 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 1.7E-20 1.2E-24 139.3 8.9 80 275-355 18-97 (101)
63 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 1.3E-20 9.6E-25 135.3 8.0 78 104-181 1-79 (83)
64 d1x0fa1 d.58.7.1 (A:183-257) N 99.8 1.8E-20 1.3E-24 130.7 8.1 75 277-352 1-75 (75)
65 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 9.5E-20 6.9E-24 133.5 11.7 82 98-181 8-89 (93)
66 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 4.2E-20 3E-24 134.3 9.7 80 276-357 9-88 (89)
67 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 3.5E-20 2.6E-24 133.7 9.1 77 104-180 1-80 (85)
68 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 1.6E-20 1.2E-24 141.0 7.4 83 275-357 8-90 (104)
69 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 4.7E-20 3.4E-24 133.0 9.1 80 275-355 4-85 (86)
70 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 8E-20 5.8E-24 135.9 10.7 85 97-181 4-94 (98)
71 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 1.5E-19 1.1E-23 134.4 11.9 84 274-357 7-96 (98)
72 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 2.9E-20 2.1E-24 134.1 7.2 81 100-181 3-85 (86)
73 d2msta_ d.58.7.1 (A:) Neural R 99.8 5.8E-20 4.2E-24 129.3 8.5 75 277-352 1-75 (75)
74 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 1.8E-19 1.3E-23 129.0 10.9 77 272-353 5-82 (83)
75 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 1.2E-19 8.8E-24 128.9 9.6 76 276-352 3-78 (79)
76 d2msta_ d.58.7.1 (A:) Neural R 99.8 5.5E-20 4E-24 129.4 7.5 75 103-178 1-75 (75)
77 d2cpea1 d.58.7.1 (A:353-453) R 99.8 1.4E-19 1E-23 135.4 9.9 84 98-181 5-96 (101)
78 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 7.7E-20 5.6E-24 132.9 8.1 79 101-181 8-86 (89)
79 d2cpea1 d.58.7.1 (A:353-453) R 99.8 2E-19 1.5E-23 134.4 10.7 85 274-358 7-99 (101)
80 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 2.6E-19 1.9E-23 131.6 10.7 76 275-356 18-93 (96)
81 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 3.9E-19 2.9E-23 130.8 11.3 81 98-181 11-91 (95)
82 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 2.7E-19 2E-23 128.4 10.0 77 101-179 6-82 (85)
83 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 3E-19 2.2E-23 131.3 10.3 79 98-182 15-93 (96)
84 d2adca1 d.58.7.1 (A:335-443) P 99.8 6.1E-19 4.4E-23 133.8 12.4 76 276-356 3-79 (109)
85 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 5.7E-19 4.1E-23 129.9 11.7 78 275-355 14-91 (95)
86 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 8.6E-19 6.2E-23 131.5 12.8 83 274-358 14-97 (104)
87 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 5E-20 3.7E-24 138.0 5.7 85 274-358 17-101 (102)
88 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 3.1E-19 2.2E-23 132.9 9.3 80 100-180 17-96 (101)
89 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 6.3E-19 4.6E-23 130.0 10.8 75 275-357 15-90 (98)
90 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 1.2E-18 8.7E-23 130.5 12.5 85 274-359 14-98 (104)
91 d2f9da1 d.58.7.1 (A:12-125) Pr 99.8 6.3E-19 4.6E-23 134.7 11.2 78 275-355 7-84 (114)
92 d2cpja1 d.58.7.1 (A:65-150) No 99.8 4.6E-19 3.4E-23 127.5 8.9 75 276-356 9-83 (86)
93 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 2.7E-20 2E-24 135.5 2.4 81 98-180 10-90 (91)
94 d2cpja1 d.58.7.1 (A:65-150) No 99.8 4.7E-19 3.4E-23 127.5 8.8 78 100-183 7-84 (86)
95 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 6.6E-19 4.8E-23 123.0 9.2 74 102-178 1-74 (75)
96 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.8 1.5E-19 1.1E-23 125.8 5.6 71 104-174 1-71 (72)
97 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 1.2E-18 8.7E-23 128.5 10.8 83 276-358 2-88 (96)
98 d3begb1 d.58.7.1 (B:121-207) S 99.8 2.5E-19 1.8E-23 129.4 6.9 74 277-357 2-75 (87)
99 d2cpia1 d.58.7.1 (A:101-189) E 99.8 3.5E-19 2.5E-23 129.1 7.3 78 99-176 6-89 (89)
100 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 8.6E-20 6.3E-24 136.7 4.2 83 99-181 16-98 (102)
101 d2adca2 d.58.7.1 (A:444-531) P 99.8 1.2E-18 8.5E-23 126.4 10.1 78 274-355 9-87 (88)
102 d2cqpa1 d.58.7.1 (A:917-1002) 99.8 3E-19 2.2E-23 129.0 6.9 80 99-178 7-86 (86)
103 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 1.3E-18 9.5E-23 124.4 10.1 77 98-179 5-82 (83)
104 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 1.2E-18 8.7E-23 121.7 9.6 74 276-352 1-74 (75)
105 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 8.8E-19 6.4E-23 131.2 9.5 83 98-181 12-94 (104)
106 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 8.5E-19 6.2E-23 129.2 9.2 82 273-359 14-95 (96)
107 d1whxa_ d.58.7.1 (A:) Probable 99.8 1.4E-18 9.9E-23 132.4 10.6 78 274-357 9-86 (111)
108 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 7.7E-19 5.6E-23 124.3 8.5 74 274-355 4-77 (79)
109 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 5E-19 3.7E-23 128.1 7.6 77 275-358 5-81 (88)
110 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 1.6E-19 1.2E-23 131.3 4.8 80 274-355 12-91 (91)
111 d2cpda1 d.58.7.1 (A:223-308) A 99.8 1.7E-18 1.3E-22 124.9 10.1 77 275-357 8-84 (86)
112 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 1.4E-18 1E-22 124.6 9.5 76 276-353 7-82 (85)
113 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 3.1E-19 2.3E-23 126.6 5.7 77 276-358 2-79 (80)
114 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 4.9E-19 3.5E-23 131.8 6.9 79 275-354 18-96 (101)
115 d2adca2 d.58.7.1 (A:444-531) P 99.8 2.2E-18 1.6E-22 124.9 10.2 79 98-180 7-86 (88)
116 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.8 2.9E-19 2.1E-23 124.3 4.9 71 278-348 1-71 (72)
117 d2cpia1 d.58.7.1 (A:101-189) E 99.8 7.3E-19 5.3E-23 127.3 7.2 76 275-350 8-89 (89)
118 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.7 1.5E-18 1.1E-22 122.8 8.6 76 98-181 2-77 (79)
119 d2cqpa1 d.58.7.1 (A:917-1002) 99.7 5.2E-19 3.8E-23 127.7 6.0 78 275-352 9-86 (86)
120 d1wg4a_ d.58.7.1 (A:) Splicing 99.7 3E-18 2.2E-22 126.3 10.2 77 275-358 15-91 (98)
121 d1whxa_ d.58.7.1 (A:) Probable 99.7 1E-18 7.4E-23 133.1 7.6 76 99-180 8-83 (111)
122 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.7 2.3E-18 1.6E-22 129.2 9.3 80 100-181 14-94 (104)
123 d1weza_ d.58.7.1 (A:) Heteroge 99.7 1.4E-18 1E-22 129.5 8.0 83 273-358 13-95 (102)
124 d1wg1a_ d.58.7.1 (A:) Probable 99.7 2E-18 1.4E-22 124.7 8.3 76 275-357 5-80 (88)
125 d1nu4a_ d.58.7.1 (A:) Spliceso 99.7 1.9E-18 1.4E-22 125.9 8.3 80 275-357 3-86 (91)
126 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.7 3.5E-18 2.6E-22 119.2 9.3 74 104-184 1-74 (75)
127 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.7 9.6E-19 7E-23 124.0 6.2 75 102-182 2-77 (80)
128 d1nu4a_ d.58.7.1 (A:) Spliceso 99.7 1.4E-18 1E-22 126.6 7.3 80 100-182 2-85 (91)
129 d2cpya1 d.58.7.1 (A:536-638) R 99.7 1E-18 7.6E-23 130.7 6.7 82 98-180 5-86 (103)
130 d1fjca_ d.58.7.1 (A:) Nucleoli 99.7 1.1E-18 7.9E-23 128.6 6.7 80 98-182 13-92 (96)
131 d1whya_ d.58.7.1 (A:) Putative 99.7 6.4E-18 4.7E-22 124.6 10.8 76 274-355 16-93 (97)
132 d2cpda1 d.58.7.1 (A:223-308) A 99.7 5.7E-18 4.1E-22 122.1 10.1 76 100-181 7-82 (86)
133 d1wg1a_ d.58.7.1 (A:) Probable 99.7 1.9E-18 1.4E-22 124.8 7.6 79 100-185 4-82 (88)
134 d2disa1 d.58.7.1 (A:8-103) Hyp 99.7 2.6E-18 1.9E-22 126.6 8.2 82 101-182 1-86 (96)
135 d1wexa_ d.58.7.1 (A:) Heteroge 99.7 2.7E-17 2E-21 122.9 13.5 81 273-359 13-95 (104)
136 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.7 1E-17 7.4E-22 116.9 10.2 72 278-356 1-72 (75)
137 d2adba1 d.58.7.1 (A:177-284) P 99.7 3.7E-18 2.7E-22 128.7 8.5 81 273-357 5-87 (108)
138 d2adca1 d.58.7.1 (A:335-443) P 99.7 6.1E-18 4.5E-22 128.2 9.4 76 101-181 2-78 (109)
139 d1weza_ d.58.7.1 (A:) Heteroge 99.7 2.4E-18 1.8E-22 128.2 6.8 81 98-181 12-92 (102)
140 d2cq1a1 d.58.7.1 (A:51-138) Po 99.7 1.4E-17 1E-21 120.5 10.4 79 272-356 5-85 (88)
141 d1whya_ d.58.7.1 (A:) Putative 99.7 1.2E-17 8.8E-22 123.1 9.9 78 98-181 14-93 (97)
142 d3begb1 d.58.7.1 (B:121-207) S 99.7 3.4E-18 2.4E-22 123.4 6.6 71 103-180 2-72 (87)
143 d2cpya1 d.58.7.1 (A:536-638) R 99.7 4.3E-18 3.1E-22 127.3 6.6 82 275-357 8-89 (103)
144 d2cq1a1 d.58.7.1 (A:51-138) Po 99.7 2.1E-17 1.5E-21 119.6 10.0 78 98-181 5-84 (88)
145 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.7 3.6E-18 2.6E-22 123.5 5.9 77 99-182 3-79 (88)
146 d1wf2a_ d.58.7.1 (A:) Heteroge 99.7 7.4E-18 5.4E-22 124.1 7.6 74 100-181 14-88 (98)
147 d1wg4a_ d.58.7.1 (A:) Splicing 99.7 1.1E-17 8.1E-22 123.2 8.0 74 100-180 14-87 (98)
148 d1wela1 d.58.7.1 (A:412-523) R 99.7 3.1E-18 2.3E-22 129.9 4.6 82 98-180 15-96 (112)
149 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.7 1.1E-17 7.7E-22 123.6 7.3 81 98-184 15-98 (99)
150 d2adba1 d.58.7.1 (A:177-284) P 99.7 1.6E-17 1.2E-21 125.2 7.7 80 98-181 4-85 (108)
151 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.7 2.7E-17 2E-21 121.4 8.4 78 273-356 16-96 (99)
152 d1x4da1 d.58.7.1 (A:8-96) Matr 99.7 5.3E-17 3.8E-21 117.2 9.7 78 273-356 6-86 (89)
153 d1wexa_ d.58.7.1 (A:) Heteroge 99.7 1.3E-16 9.5E-21 119.1 11.5 79 98-182 12-92 (104)
154 d1weya_ d.58.7.1 (A:) Calcipre 99.7 5.4E-17 3.9E-21 120.5 8.9 78 275-358 5-87 (104)
155 d1x4da1 d.58.7.1 (A:8-96) Matr 99.7 6.7E-17 4.9E-21 116.6 8.5 80 98-183 5-87 (89)
156 d1wela1 d.58.7.1 (A:412-523) R 99.7 1E-17 7.5E-22 127.0 4.4 82 273-355 16-97 (112)
157 d1u2fa_ d.58.7.1 (A:) Splicing 99.6 3.7E-18 2.7E-22 124.3 -1.5 77 102-179 2-83 (90)
158 d1u2fa_ d.58.7.1 (A:) Splicing 99.6 7.5E-18 5.5E-22 122.6 -1.3 77 276-353 2-83 (90)
159 d1u1qa_ d.58.7.1 (A:) Nuclear 99.6 1.1E-15 7.7E-20 127.4 10.9 83 98-181 94-176 (183)
160 d1weya_ d.58.7.1 (A:) Calcipre 99.6 5.4E-16 3.9E-20 115.0 6.7 78 99-182 3-85 (104)
161 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=5.7e-33 Score=234.43 Aligned_cols=176 Identities=20% Similarity=0.417 Sum_probs=149.9
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
|.+.++|||+|||+++|+++|+++|++||.|.++.++++..++.++|||||+|.+.++|.+|+. +++..+.++.+.+..
T Consensus 3 p~~~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~-~~~~~~~~~~~~~~~ 81 (183)
T d1u1qa_ 3 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKR 81 (183)
T ss_dssp CHHHHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHH-hcCCcccccchhhhh
Confidence 3456899999999999999999999999999999999999999999999999999999999995 666777777776654
Q ss_pred ccccccccccCCCCCCCHHHHHHHHHhhCCCeeEEEEeecCCCCCCCcceEEeecCChhHHHHHHHHhCCCCcccCCCCC
Q 014086 178 SQAKYRLFIGNIPRNWGSEDLQKVVSEVGPGVTGVELVKDMKNSSNNRGFAFIEYHNHKCAEYSRQKMTNPNFKLGTNAP 257 (431)
Q Consensus 178 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~g~~i~~~~~~~~~~~~~~~~g~~fv~f~~~~~a~~a~~~~~~~~~~~~~~~~ 257 (431)
.......
T Consensus 82 ~~~~~~~------------------------------------------------------------------------- 88 (183)
T d1u1qa_ 82 AVSREDS------------------------------------------------------------------------- 88 (183)
T ss_dssp CCCTTGG-------------------------------------------------------------------------
T ss_pred hhhcccc-------------------------------------------------------------------------
Confidence 3321100
Q ss_pred ccccCCCCCCCCCCCCcccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhc
Q 014086 258 TVSWADPRNVDSSGASQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNT 337 (431)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l 337 (431)
.........++|||+|||+.+|+++|+++|+.||.|..+.|+.+..++.++|||||+|.+.++|.+|+. +
T Consensus 89 ---------~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~ 158 (183)
T d1u1qa_ 89 ---------QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-Q 158 (183)
T ss_dssp ---------GSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-S
T ss_pred ---------cccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-h
Confidence 000011223689999999999999999999999999999999999888889999999999999999997 6
Q ss_pred CCCccCCcEEEEEeccCCCC
Q 014086 338 EKYELDGQALECSLAKPQAD 357 (431)
Q Consensus 338 ~~~~~~g~~l~v~~a~~~~~ 357 (431)
++..|.|+.|+|.+|.++..
T Consensus 159 ~~~~~~G~~i~V~~A~~k~e 178 (183)
T d1u1qa_ 159 KYHTVNGHNCEVRKALSKQE 178 (183)
T ss_dssp SCEEETTEEEEEEECCCHHH
T ss_pred CCCeECCEEEEEEecCCccc
Confidence 88899999999999987644
No 2
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.86 E-value=4.2e-22 Score=143.02 Aligned_cols=80 Identities=24% Similarity=0.488 Sum_probs=77.5
Q ss_pred CCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccccc
Q 014086 101 GSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQA 180 (431)
Q Consensus 101 ~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~ 180 (431)
+++|||+|||+++|+++|+++|++||.|.+|+|++++.+|+++|||||+|.+.++|.+|++.||+..|.|+.|+|.++++
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999875
No 3
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.86 E-value=5.1e-22 Score=142.54 Aligned_cols=79 Identities=23% Similarity=0.342 Sum_probs=76.6
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
++|||+|||..+|+++|+++|++||.|.+|+|++++.++.++|||||+|.+.++|.+|++.|||..|.|++|+|.||+|
T Consensus 3 t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 3 TNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp SEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 6899999999999999999999999999999999988888899999999999999999999999999999999999986
No 4
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=5.7e-22 Score=145.39 Aligned_cols=85 Identities=27% Similarity=0.444 Sum_probs=80.5
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
....++|||+|||+++|+++|+++|++||.|.+|+|++++.+|+++|||||+|.+.++|.+|++.||+..|.|+.|+|.+
T Consensus 6 ~~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ 85 (93)
T d1x5ua1 6 RNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNK 85 (93)
T ss_dssp CCTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 014086 178 SQAKY 182 (431)
Q Consensus 178 ~~~~~ 182 (431)
+.++.
T Consensus 86 A~~~~ 90 (93)
T d1x5ua1 86 ASAHN 90 (93)
T ss_dssp TTTTS
T ss_pred cCCCC
Confidence 98754
No 5
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.86 E-value=8.1e-22 Score=143.08 Aligned_cols=84 Identities=21% Similarity=0.377 Sum_probs=79.2
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
..++++|||+|||+++|+++|+++|++||.|.+|++++++.+|+++|||||+|.+.++|.+|+..|||..|.|++|+|++
T Consensus 4 s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~ 83 (88)
T d1rk8a_ 4 SVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDW 83 (88)
T ss_dssp CC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 014086 178 SQAK 181 (431)
Q Consensus 178 ~~~~ 181 (431)
+.++
T Consensus 84 a~~k 87 (88)
T d1rk8a_ 84 CFVK 87 (88)
T ss_dssp SEEC
T ss_pred ecCC
Confidence 8754
No 6
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=2.9e-21 Score=143.71 Aligned_cols=84 Identities=20% Similarity=0.341 Sum_probs=79.6
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
.+++|||+|||+.+|+++|+++|++||.|..|+|+.++.++.++|||||+|.+.++|.+||..||+..|.|++|+|.+|.
T Consensus 7 ~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~ 86 (99)
T d1whwa_ 7 GSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPST 86 (99)
T ss_dssp SCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECC
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 34789999999999999999999999999999999999988899999999999999999999999999999999999998
Q ss_pred CCCC
Q 014086 354 PQAD 357 (431)
Q Consensus 354 ~~~~ 357 (431)
++..
T Consensus 87 ~~~~ 90 (99)
T d1whwa_ 87 IKKE 90 (99)
T ss_dssp CCST
T ss_pred CCCc
Confidence 7654
No 7
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=5.3e-22 Score=144.49 Aligned_cols=83 Identities=28% Similarity=0.424 Sum_probs=79.1
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.++|||+|||+++|+++|+++|++||.|.+|+|+.++.++.++|||||+|.+.++|.+|+..|||..|+|++|+|.||+|
T Consensus 5 ~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~p 84 (89)
T d2cqba1 5 KRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKP 84 (89)
T ss_dssp CSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 37999999999999999999999999999999999999888999999999999999999999999999999999999987
Q ss_pred CCC
Q 014086 355 QAD 357 (431)
Q Consensus 355 ~~~ 357 (431)
+..
T Consensus 85 ~~~ 87 (89)
T d2cqba1 85 MRI 87 (89)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 8
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=2e-21 Score=142.46 Aligned_cols=83 Identities=24% Similarity=0.366 Sum_probs=79.2
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.++|||+|||..+|+++|+++|++||.|.+|+|++++.++.++|||||+|.+.++|.+|+..|||..|.|+.|+|.||++
T Consensus 9 ~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~~ 88 (93)
T d1x5ua1 9 DATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASA 88 (93)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETTT
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC
Q 014086 355 QAD 357 (431)
Q Consensus 355 ~~~ 357 (431)
+..
T Consensus 89 ~~~ 91 (93)
T d1x5ua1 89 HNK 91 (93)
T ss_dssp TSC
T ss_pred CCC
Confidence 653
No 9
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.1e-21 Score=140.69 Aligned_cols=81 Identities=22% Similarity=0.530 Sum_probs=76.3
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
|.+.++|||+|||+++|+++|+++|++||.|..|+|++++.+|+++|||||+|.+.++|.+||+ +++..|.||.|+|..
T Consensus 3 pe~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~ 81 (84)
T d1l3ka1 3 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKR 81 (84)
T ss_dssp CGGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEE
T ss_pred CCCCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEe
Confidence 4456899999999999999999999999999999999999999999999999999999999995 799999999999987
Q ss_pred cc
Q 014086 178 SQ 179 (431)
Q Consensus 178 ~~ 179 (431)
|.
T Consensus 82 A~ 83 (84)
T d1l3ka1 82 AV 83 (84)
T ss_dssp CC
T ss_pred ee
Confidence 64
No 10
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=9.8e-22 Score=141.22 Aligned_cols=79 Identities=32% Similarity=0.534 Sum_probs=75.6
Q ss_pred CCCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeee
Q 014086 97 LPPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRC 175 (431)
Q Consensus 97 ~~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v 175 (431)
.|.++++|||+|||+++|+++|+++|++||.|.+|+|++++.+|+++|||||+|.+.++|.+|++.||+..|.||+|+|
T Consensus 5 ~p~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 5 NPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp SCCGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 3556789999999999999999999999999999999999999999999999999999999999999999999999987
No 11
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.85 E-value=1.3e-21 Score=141.96 Aligned_cols=82 Identities=13% Similarity=0.236 Sum_probs=77.9
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
..++|||+|||..+|+++|+++|++||.|.+|+|++++.++.++|||||+|.+.++|.+|+..|||..|.|+.|+|.||.
T Consensus 6 ~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a~ 85 (88)
T d1rk8a_ 6 EGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWCF 85 (88)
T ss_dssp -CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEESE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEec
Confidence 34799999999999999999999999999999999999888899999999999999999999999999999999999998
Q ss_pred CC
Q 014086 354 PQ 355 (431)
Q Consensus 354 ~~ 355 (431)
++
T Consensus 86 ~k 87 (88)
T d1rk8a_ 86 VK 87 (88)
T ss_dssp EC
T ss_pred CC
Confidence 65
No 12
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.3e-21 Score=140.54 Aligned_cols=79 Identities=27% Similarity=0.452 Sum_probs=76.4
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
++|||+|||..+|+++|+++|++||.|..|+++++..++.++|||||+|.+.++|.+|+..|||..|.|++|+|.||+|
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 5799999999999999999999999999999999988888899999999999999999999999999999999999986
No 13
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.3e-21 Score=139.32 Aligned_cols=77 Identities=27% Similarity=0.462 Sum_probs=75.2
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccc
Q 014086 103 EVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQ 179 (431)
Q Consensus 103 ~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~ 179 (431)
+|||+|||+++|+++|+++|++||+|.+|+|++++.+|+++|||||+|.+.++|.+|++.|+|..+.||+|+|.++.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999885
No 14
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=6.4e-22 Score=144.06 Aligned_cols=83 Identities=28% Similarity=0.545 Sum_probs=79.4
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
...++|||+|||+++|+++|+++|++||+|.+|+|++++.+|+++|||||+|.+.++|.+|++.+|+..|.|+.|+|.++
T Consensus 3 ~~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a 82 (89)
T d2cqba1 3 TTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82 (89)
T ss_dssp CCCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccc
Q 014086 179 QAK 181 (431)
Q Consensus 179 ~~~ 181 (431)
.++
T Consensus 83 ~p~ 85 (89)
T d2cqba1 83 KPM 85 (89)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 15
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.1e-21 Score=142.37 Aligned_cols=82 Identities=18% Similarity=0.355 Sum_probs=78.7
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
..+++|||+|||+++|+++|+++|++||.|.+|.+++++.+|+++|||||+|.+.++|..|++.||+..|.|+.|+|.++
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cc
Q 014086 179 QA 180 (431)
Q Consensus 179 ~~ 180 (431)
..
T Consensus 85 ~~ 86 (93)
T d1h2vz_ 85 AG 86 (93)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 16
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.2e-21 Score=142.90 Aligned_cols=83 Identities=23% Similarity=0.443 Sum_probs=79.0
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
...+|||+|||..+|+++|+++|++||.|..|+|+.++.++.+||||||+|.+.++|.+|++.|||..|.|+.|+|.||+
T Consensus 7 ~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~ak 86 (90)
T d2cq0a1 7 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAK 86 (90)
T ss_dssp SSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeee
Confidence 34789999999999999999999999999999999999888899999999999999999999999999999999999998
Q ss_pred CCC
Q 014086 354 PQA 356 (431)
Q Consensus 354 ~~~ 356 (431)
|..
T Consensus 87 p~~ 89 (90)
T d2cq0a1 87 PST 89 (90)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 17
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.3e-21 Score=139.14 Aligned_cols=80 Identities=24% Similarity=0.504 Sum_probs=77.1
Q ss_pred CCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccccc
Q 014086 101 GSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQA 180 (431)
Q Consensus 101 ~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~ 180 (431)
.++|||+|||+++++++|+++|++||.|.+|+++++..+|+++|||||+|.+.++|.+|++.|++..|.|+.|+|.++.|
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999875
No 18
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.5e-21 Score=141.89 Aligned_cols=82 Identities=23% Similarity=0.342 Sum_probs=78.0
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
.+++|||+|||+++|+++|+++|++||.|.+|.|++++.++.++|||||+|.+.++|..|+..|||..|+|++|+|.|+.
T Consensus 6 ~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~ 85 (93)
T d1h2vz_ 6 KSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDA 85 (93)
T ss_dssp TCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 34799999999999999999999999999999999999998899999999999999999999999999999999999986
Q ss_pred CC
Q 014086 354 PQ 355 (431)
Q Consensus 354 ~~ 355 (431)
..
T Consensus 86 ~~ 87 (93)
T d1h2vz_ 86 GF 87 (93)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 19
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.7e-21 Score=138.72 Aligned_cols=78 Identities=21% Similarity=0.290 Sum_probs=75.5
Q ss_pred EEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 277 AVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 277 ~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.|||+|||+.+|+++|+++|++||.|.+|+|++++.++.++|||||+|.++++|..|++.|||..+.|++|+|.||+.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 699999999999999999999999999999999999999999999999999999999999999999999999999963
No 20
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.4e-21 Score=142.59 Aligned_cols=83 Identities=20% Similarity=0.444 Sum_probs=79.5
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
.+.++|||+|||+++|+++|+++|++||.|.+|+|++++.+|.++|||||+|.+.++|.+|++.|++..|.|+.|+|.++
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccc
Q 014086 179 QAK 181 (431)
Q Consensus 179 ~~~ 181 (431)
.++
T Consensus 86 kp~ 88 (90)
T d2cq0a1 86 KPS 88 (90)
T ss_dssp SCC
T ss_pred eCC
Confidence 865
No 21
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.8e-21 Score=140.14 Aligned_cols=82 Identities=16% Similarity=0.274 Sum_probs=78.1
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccCC
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKPQ 355 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~~ 355 (431)
.+|||+|||..+|+++|+++|++||.|..|+|++++.++.++|||||+|.++++|..|+..|||..|.|++|.|.||.+.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 47999999999999999999999999999999999998889999999999999999999999999999999999999865
Q ss_pred CC
Q 014086 356 AD 357 (431)
Q Consensus 356 ~~ 357 (431)
..
T Consensus 82 ~~ 83 (85)
T d2u2fa_ 82 AK 83 (85)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 22
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.85 E-value=8.3e-21 Score=150.82 Aligned_cols=84 Identities=26% Similarity=0.432 Sum_probs=79.3
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
..++|||+|||+++|+++|+++|++||.|.+|+|++++.++.++|||||+|.+.++|.+||+.|||..|+|++|+|.||+
T Consensus 41 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~ 120 (139)
T d1u6fa1 41 VLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAA 120 (139)
T ss_dssp TTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 34789999999999999999999999999999999999988889999999999999999999999999999999999998
Q ss_pred CCCC
Q 014086 354 PQAD 357 (431)
Q Consensus 354 ~~~~ 357 (431)
+...
T Consensus 121 ~~~~ 124 (139)
T d1u6fa1 121 SGHQ 124 (139)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6554
No 23
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2.6e-21 Score=144.42 Aligned_cols=84 Identities=24% Similarity=0.473 Sum_probs=80.0
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
+++++|||+|||+++|+++|+++|+.||.|.++.++.++.+|+++|||||+|.+.++|.+||+.||+..|.|+.|+|.++
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccc
Q 014086 179 QAKY 182 (431)
Q Consensus 179 ~~~~ 182 (431)
.++.
T Consensus 96 ~~k~ 99 (102)
T d2cpza1 96 RSKN 99 (102)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 8653
No 24
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.2e-21 Score=139.94 Aligned_cols=82 Identities=27% Similarity=0.531 Sum_probs=76.1
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
...+++|||+|||+++|+++|+++|++||.|.+|+|++++.+|+++|||||+|.+.++|.+||+ +...|.||.|.|.+
T Consensus 5 ~~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~--~~~~l~Gr~i~v~~ 82 (90)
T d2cqga1 5 VQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS--QRHMIDGRWCDCKL 82 (90)
T ss_dssp CCCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHH--SCEEETTEEEEEEC
T ss_pred CcCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHh--cCCccCCEEeEEEe
Confidence 4467899999999999999999999999999999999999999999999999999999999997 44589999999999
Q ss_pred cccc
Q 014086 178 SQAK 181 (431)
Q Consensus 178 ~~~~ 181 (431)
+.++
T Consensus 83 a~~k 86 (90)
T d2cqga1 83 PNSK 86 (90)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 8764
No 25
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.2e-21 Score=144.00 Aligned_cols=85 Identities=19% Similarity=0.366 Sum_probs=80.6
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
++++|||+|||+++|+++|+++|+.||.|..+.++.+..++.+||||||+|.+.++|..||+.|||..|.|++|+|.||+
T Consensus 17 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~ 96 (102)
T d2cpza1 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKR 96 (102)
T ss_dssp TTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 44789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 014086 354 PQADQ 358 (431)
Q Consensus 354 ~~~~~ 358 (431)
++..+
T Consensus 97 ~k~~~ 101 (102)
T d2cpza1 97 SKNDS 101 (102)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 87764
No 26
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=3e-21 Score=143.58 Aligned_cols=85 Identities=26% Similarity=0.402 Sum_probs=80.2
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
+..+++|||+|||+++|+++|+++|++||.|.+|+|++++.+|+++|||||+|.+.++|.+||+.||+..|.||.|+|.+
T Consensus 5 ~~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~ 84 (99)
T d1whwa_ 5 SSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLP 84 (99)
T ss_dssp CCSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34577899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 014086 178 SQAKY 182 (431)
Q Consensus 178 ~~~~~ 182 (431)
+..+.
T Consensus 85 a~~~~ 89 (99)
T d1whwa_ 85 STIKK 89 (99)
T ss_dssp CCCCS
T ss_pred CCCCC
Confidence 88654
No 27
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.3e-21 Score=140.86 Aligned_cols=85 Identities=24% Similarity=0.417 Sum_probs=80.1
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.++|||+|||+++|+++|+++|++||.|..|.++.+..++.++|||||+|.++++|.+|+..|||..|.|++|+|.+|.+
T Consensus 5 ~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~~ 84 (90)
T d1x5sa1 5 EGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGK 84 (90)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEEC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 36899999999999999999999999999999999999898999999999999999999999999999999999999987
Q ss_pred CCCCC
Q 014086 355 QADQK 359 (431)
Q Consensus 355 ~~~~~ 359 (431)
....+
T Consensus 85 ~~~~r 89 (90)
T d1x5sa1 85 SSDNR 89 (90)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 76543
No 28
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=7.5e-21 Score=139.63 Aligned_cols=84 Identities=24% Similarity=0.428 Sum_probs=77.2
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCC-CCCcCCEEEEEeCCHHHHHHHHHhc-CCCccCCcEEEEEe
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKP-GQEKNRIGFVHFAERSSAMKALKNT-EKYELDGQALECSL 351 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~-~~~~rg~afV~F~~~~~A~~Al~~l-~~~~~~g~~l~v~~ 351 (431)
.+++|||+|||+.+++++|+.+|++||.|.+|+|+++.. ++.++|||||+|.+.++|.+|+..| |+..|.|++|+|.|
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~ 86 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 86 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEE
Confidence 347899999999999999999999999999999998754 6678999999999999999999998 89999999999999
Q ss_pred ccCCCC
Q 014086 352 AKPQAD 357 (431)
Q Consensus 352 a~~~~~ 357 (431)
|.....
T Consensus 87 A~~~~~ 92 (94)
T d2cpha1 87 ADSEVT 92 (94)
T ss_dssp CCCCCC
T ss_pred cCCCCC
Confidence 987654
No 29
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.84 E-value=4.7e-21 Score=138.18 Aligned_cols=80 Identities=23% Similarity=0.435 Sum_probs=75.6
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCC--eEeeec
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKG--KKIRCS 176 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g--~~i~v~ 176 (431)
...++|||+|||+++|+++|+++|++||.|.+|+|++++.+|+++|||||+|.+.++|.+|++.||+..+.| ++|+|.
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~ 83 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVR 83 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEE
Confidence 356889999999999999999999999999999999999999999999999999999999999999999976 889998
Q ss_pred cc
Q 014086 177 TS 178 (431)
Q Consensus 177 ~~ 178 (431)
+|
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 75
No 30
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.4e-20 Score=140.66 Aligned_cols=82 Identities=30% Similarity=0.476 Sum_probs=76.6
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.++|||+|||+.+|+++|+++|++||.|.+|+|++++.++.++|||||+|.+.++|.+||+.+|+ .|.|+.|+|.+|..
T Consensus 10 ~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~~ 88 (103)
T d2cqda1 10 FTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAYL 88 (103)
T ss_dssp SSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEESTT
T ss_pred CcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcCC
Confidence 36899999999999999999999999999999999999888899999999999999999998876 79999999999986
Q ss_pred CCC
Q 014086 355 QAD 357 (431)
Q Consensus 355 ~~~ 357 (431)
...
T Consensus 89 ~~~ 91 (103)
T d2cqda1 89 GAK 91 (103)
T ss_dssp TCC
T ss_pred CCC
Confidence 544
No 31
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=5.4e-21 Score=140.41 Aligned_cols=85 Identities=25% Similarity=0.492 Sum_probs=78.5
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCC-CCCCcceEEEEecCHHHHHHHHHHh-CCCccCCeEeee
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKD-SSENKGFAFVTFRNVELASKAIDKL-NNTEFKGKKIRC 175 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~-~g~~~g~afV~f~~~e~a~~al~~l-~~~~~~g~~i~v 175 (431)
...+++|||+|||+++++++|+++|++||.|.+|+|+++.. +|+++|||||+|.+.++|.+|++.| |+..|.|++|+|
T Consensus 5 ~~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V 84 (94)
T d2cpha1 5 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVL 84 (94)
T ss_dssp SSCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEE
Confidence 34578999999999999999999999999999999998854 7999999999999999999999998 899999999999
Q ss_pred ccccccc
Q 014086 176 STSQAKY 182 (431)
Q Consensus 176 ~~~~~~~ 182 (431)
.++..+.
T Consensus 85 ~~A~~~~ 91 (94)
T d2cpha1 85 EWADSEV 91 (94)
T ss_dssp EECCCCC
T ss_pred EEcCCCC
Confidence 9998653
No 32
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2.6e-21 Score=139.21 Aligned_cols=80 Identities=21% Similarity=0.521 Sum_probs=76.9
Q ss_pred CEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccccc
Q 014086 102 SEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQAK 181 (431)
Q Consensus 102 ~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~~ 181 (431)
.+|||+|||+++|+++|+++|++||+|.+|+|++++.||+++|||||+|.++++|.+|++.|++..|.|++|.|.++.+.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999998753
No 33
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=7.3e-21 Score=136.98 Aligned_cols=79 Identities=22% Similarity=0.451 Sum_probs=74.1
Q ss_pred CCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCe--Eeeecc
Q 014086 100 HGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGK--KIRCST 177 (431)
Q Consensus 100 ~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~--~i~v~~ 177 (431)
.+++|||+|||+++|+++|+++|++||+|.+|+|++++.+|+++|||||+|.+.++|.+|++.|||..+.|+ +|+|.+
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 368899999999999999999999999999999999999999999999999999999999999999999984 588876
Q ss_pred c
Q 014086 178 S 178 (431)
Q Consensus 178 ~ 178 (431)
|
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 4
No 34
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=1.2e-21 Score=137.90 Aligned_cols=76 Identities=26% Similarity=0.531 Sum_probs=72.9
Q ss_pred CEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 102 SEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 102 ~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
++|||+|||+++|+++|+++|++||.|.+|+|++++.||+++|||||+|.+.++|.+||+ +++..|.||.|+|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 579999999999999999999999999999999999999999999999999999999996 7999999999999865
No 35
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=7.1e-21 Score=138.08 Aligned_cols=82 Identities=24% Similarity=0.442 Sum_probs=75.9
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
.+++|||+|||+++|+++|+++|++||.|..|+|++++.++.+||||||+|.+.++|.+||+.+ ..|+|+.|.|.+|.
T Consensus 7 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~--~~l~Gr~i~v~~a~ 84 (90)
T d2cqga1 7 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR--HMIDGRWCDCKLPN 84 (90)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSC--EEETTEEEEEECCC
T ss_pred CCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcC--CccCCEEeEEEeCC
Confidence 3478999999999999999999999999999999999999999999999999999999999854 48999999999998
Q ss_pred CCCC
Q 014086 354 PQAD 357 (431)
Q Consensus 354 ~~~~ 357 (431)
++..
T Consensus 85 ~k~~ 88 (90)
T d2cqga1 85 SKQS 88 (90)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 7654
No 36
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=6.1e-21 Score=137.40 Aligned_cols=78 Identities=27% Similarity=0.471 Sum_probs=73.9
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCC--cEEEEEec
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDG--QALECSLA 352 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g--~~l~v~~a 352 (431)
.++|||+|||+.+|+++|+++|++||.|.+|+|++++.++.++|||||+|.+.++|.+|++.|||..+.| ++|+|.||
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 3689999999999999999999999999999999999888889999999999999999999999999987 56999987
No 37
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.83 E-value=3.9e-21 Score=137.42 Aligned_cols=79 Identities=19% Similarity=0.333 Sum_probs=69.6
Q ss_pred CEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccccc
Q 014086 102 SEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQA 180 (431)
Q Consensus 102 ~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~ 180 (431)
+||||+|||+++|+++|+++|++||.|..+.++.+..+|+++|||||+|.+.++|.+|++.||+..|.|++|+|.++.|
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 7999999999999999999999999999999998888999999999999999999999999999999999999998864
No 38
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=5.2e-21 Score=134.11 Aligned_cols=75 Identities=28% Similarity=0.595 Sum_probs=71.7
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 103 EVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 103 ~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
+|||+|||+++|+++|+++|++||+|.+|.|++++.+++++|||||+|.+.++|.+||+ +++..|.|+.|.|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 49999999999999999999999999999999999999999999999999999999996 7999999999999764
No 39
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.83 E-value=4.5e-21 Score=137.07 Aligned_cols=79 Identities=14% Similarity=0.340 Sum_probs=69.9
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
++|||+|||+++|+++|+++|++||.|..+.++.+...+.++|||||+|.+.++|.+|++.|||..|.|++|+|.+++|
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 5899999999999999999999999999988888888888899999999999999999999999999999999999987
No 40
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=1.3e-20 Score=133.32 Aligned_cols=76 Identities=26% Similarity=0.427 Sum_probs=72.2
Q ss_pred EEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 277 AVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 277 ~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
+|||+|||+.+|+++|+++|++||.|.+|+|..++. +.++|||||+|.+.++|.+|++.|||..+.|++|+|++|.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~-g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRS-GRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSC-CCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeec-cccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 699999999999999999999999999999999874 4559999999999999999999999999999999999986
No 41
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.9e-20 Score=136.47 Aligned_cols=83 Identities=25% Similarity=0.370 Sum_probs=76.4
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
..++|||+|||..+|+++|+++|+.||.|.+|+|+++..+. +|||||+|.+.++|.+|+..|||..|.|+.|+|.||+
T Consensus 7 ~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~ 84 (90)
T d2cqia1 7 QPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 84 (90)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 34799999999999999999999999999999999987654 6999999999999999999999999999999999998
Q ss_pred CCCCC
Q 014086 354 PQADQ 358 (431)
Q Consensus 354 ~~~~~ 358 (431)
++..+
T Consensus 85 ~~~~~ 89 (90)
T d2cqia1 85 TPSSQ 89 (90)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 76553
No 42
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.83 E-value=8.7e-21 Score=136.75 Aligned_cols=78 Identities=31% Similarity=0.481 Sum_probs=74.4
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCC--cEEEEEec
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDG--QALECSLA 352 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g--~~l~v~~a 352 (431)
.++|||+|||.++|+++|+++|++||.|..|+|++++.++.++|||||+|.+.++|.+|++.|||..+.| ++|+|.||
T Consensus 6 ~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~A 85 (85)
T d1b7fa2 6 DTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 85 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEEC
Confidence 3689999999999999999999999999999999999888899999999999999999999999999976 89999997
No 43
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=9.5e-21 Score=133.93 Aligned_cols=76 Identities=17% Similarity=0.321 Sum_probs=72.8
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccc
Q 014086 103 EVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQ 179 (431)
Q Consensus 103 ~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~ 179 (431)
+|||+|||+++|+++|+++|++||.|.+|+|+.++ +|+++|||||+|.+.++|.+|++.+|+..+.|++|+|+++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 69999999999999999999999999999999885 79999999999999999999999999999999999998865
No 44
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=3.4e-21 Score=143.03 Aligned_cols=80 Identities=30% Similarity=0.498 Sum_probs=76.1
Q ss_pred CCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccccc
Q 014086 101 GSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQA 180 (431)
Q Consensus 101 ~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~ 180 (431)
.++|||+|||+++|+++|+++|+.||.|.+|+|+++..+|+++|||||+|.+.++|.+|+ .||+..|.|+.|+|.++.+
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~-~l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH-HHTTEEETTEEEEEEEHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHH-HHCCCEECCEEEEEEECCC
Confidence 378999999999999999999999999999999999999999999999999999999999 5999999999999998765
Q ss_pred c
Q 014086 181 K 181 (431)
Q Consensus 181 ~ 181 (431)
+
T Consensus 97 ~ 97 (101)
T d2cq4a1 97 E 97 (101)
T ss_dssp H
T ss_pred C
Confidence 4
No 45
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=8.6e-21 Score=136.29 Aligned_cols=80 Identities=16% Similarity=0.237 Sum_probs=74.9
Q ss_pred EEEecCCCCCCHHHHHHHHhccccEEE-EEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccCCC
Q 014086 278 VYVKNLPRNVTQDQLKKLFEHHGRITK-VVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKPQA 356 (431)
Q Consensus 278 l~V~nLp~~~t~~~L~~~F~~~G~v~~-v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~~~ 356 (431)
|||+|||+++|+++|+++|++||.|.. ++++++..++.++|||||+|.+.++|.+|+..|||..|.|++|+|.||.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 799999999999999999999999876 4788898888889999999999999999999999999999999999998765
Q ss_pred C
Q 014086 357 D 357 (431)
Q Consensus 357 ~ 357 (431)
.
T Consensus 81 ~ 81 (83)
T d1x5ta1 81 S 81 (83)
T ss_dssp C
T ss_pred c
Confidence 4
No 46
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=8.8e-21 Score=141.21 Aligned_cols=83 Identities=20% Similarity=0.419 Sum_probs=78.1
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.++|||+|||+++|+++|+++|++||.|..+.|++++.+..++|||||+|.+.++|.+||. +++..|.|+.|.|.+|.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 4799999999999999999999999999999999999998889999999999999999995 799999999999999998
Q ss_pred CCCC
Q 014086 355 QADQ 358 (431)
Q Consensus 355 ~~~~ 358 (431)
+...
T Consensus 99 ke~~ 102 (103)
T d1x4ba1 99 REES 102 (103)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 7654
No 47
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=8.3e-21 Score=138.66 Aligned_cols=83 Identities=27% Similarity=0.614 Sum_probs=78.9
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
.+.++|||+|||+++|+++|+++|++||.|..|.++++..+|.++|||||+|.+.++|.+|++.|++..|.|+.|+|.++
T Consensus 3 ~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a 82 (90)
T d1x5sa1 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82 (90)
T ss_dssp CCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEE
T ss_pred CCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccc
Q 014086 179 QAK 181 (431)
Q Consensus 179 ~~~ 181 (431)
.++
T Consensus 83 ~~~ 85 (90)
T d1x5sa1 83 GKS 85 (90)
T ss_dssp ECC
T ss_pred CCC
Confidence 754
No 48
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.3e-20 Score=135.18 Aligned_cols=76 Identities=22% Similarity=0.319 Sum_probs=73.1
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEE
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALEC 349 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v 349 (431)
+.++|||+|||+.+|+++|+++|++||.|.+|+|++++.++.++|||||+|.+.++|.+|+..|||..|+|++|+|
T Consensus 8 ~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 8 PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp GGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 4579999999999999999999999999999999999998889999999999999999999999999999999987
No 49
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.3e-20 Score=140.37 Aligned_cols=80 Identities=24% Similarity=0.529 Sum_probs=76.1
Q ss_pred CCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccccc
Q 014086 101 GSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQA 180 (431)
Q Consensus 101 ~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~ 180 (431)
.++|||+|||+++|+++|+++|++||.|..+.|++++.++.++|||||+|.+.++|.+|| .+++..|.|+.|.|.++.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al-~~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM-AARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHH-TSCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHH-HhCCCeECCEEEEEEECcc
Confidence 478999999999999999999999999999999999999999999999999999999999 5899999999999999876
Q ss_pred c
Q 014086 181 K 181 (431)
Q Consensus 181 ~ 181 (431)
+
T Consensus 99 k 99 (103)
T d1x4ba1 99 R 99 (103)
T ss_dssp C
T ss_pred c
Confidence 4
No 50
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.82 E-value=1.2e-20 Score=149.94 Aligned_cols=84 Identities=23% Similarity=0.449 Sum_probs=79.4
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
+...++|||+|||+++|+++|+++|++||.|.+|+|++++.||+++|||||+|.+.++|.+||+.||+..|.||+|+|.+
T Consensus 39 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~ 118 (139)
T d1u6fa1 39 PDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVAL 118 (139)
T ss_dssp TTTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 44567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 014086 178 SQAK 181 (431)
Q Consensus 178 ~~~~ 181 (431)
+..+
T Consensus 119 a~~~ 122 (139)
T d1u6fa1 119 AASG 122 (139)
T ss_dssp SSCC
T ss_pred cCCC
Confidence 8754
No 51
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=5.6e-20 Score=134.70 Aligned_cols=81 Identities=23% Similarity=0.405 Sum_probs=75.4
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
..++|||+|||+.+|+++|+++|++||.|..|+++.+..+ ++|||||+|.+.++|.+|+..||+..|.|+.|+|.||+
T Consensus 10 ~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~--~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~ 87 (93)
T d2cq3a1 10 TPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 87 (93)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTT--TCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccC--CcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecC
Confidence 3478999999999999999999999999999999988755 47999999999999999999999999999999999998
Q ss_pred CCC
Q 014086 354 PQA 356 (431)
Q Consensus 354 ~~~ 356 (431)
++.
T Consensus 88 ~r~ 90 (93)
T d2cq3a1 88 ARV 90 (93)
T ss_dssp SSC
T ss_pred cCC
Confidence 764
No 52
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.5e-20 Score=133.57 Aligned_cols=79 Identities=24% Similarity=0.405 Sum_probs=74.6
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
..++|||+|||+.+|+++|+++|++||.|..|+|++++.++.++|||||+|.+.++|.+|+. ++++.|.|+.|+|..|.
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 34799999999999999999999999999999999999999999999999999999999997 58899999999999874
No 53
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=7e-21 Score=143.04 Aligned_cols=81 Identities=28% Similarity=0.625 Sum_probs=77.6
Q ss_pred CCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccccc
Q 014086 101 GSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQA 180 (431)
Q Consensus 101 ~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~ 180 (431)
.++|||+|||+++|+++|+++|++||.|.+|+|++++.+|+++|||||+|.+.++|.+|++.|++..|.|+.|+|.++.+
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred c
Q 014086 181 K 181 (431)
Q Consensus 181 ~ 181 (431)
.
T Consensus 88 ~ 88 (104)
T d1p1ta_ 88 E 88 (104)
T ss_dssp T
T ss_pred C
Confidence 3
No 54
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.7e-20 Score=131.38 Aligned_cols=75 Identities=21% Similarity=0.396 Sum_probs=71.3
Q ss_pred EEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 277 AVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 277 ~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
+|||+|||+++|+++|+++|++||.|..|+|++++.++.++|||||+|.+.++|.+||. +++..|+|+.|.|..|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 59999999999999999999999999999999999999999999999999999999997 7999999999999764
No 55
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=1.3e-20 Score=136.09 Aligned_cols=78 Identities=28% Similarity=0.459 Sum_probs=72.5
Q ss_pred EEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCC---CcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 278 VYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQ---EKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 278 l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~---~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
|||+|||+++|+++|+++|++||.|.+|+|++++.+. .+||||||+|.+.++|.+|+..|||..|+|++|+|.||.+
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 8999999999999999999999999999999877654 3589999999999999999999999999999999999864
Q ss_pred C
Q 014086 355 Q 355 (431)
Q Consensus 355 ~ 355 (431)
.
T Consensus 81 ~ 81 (85)
T d2cpfa1 81 A 81 (85)
T ss_dssp S
T ss_pred C
Confidence 4
No 56
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.2e-20 Score=139.64 Aligned_cols=82 Identities=20% Similarity=0.498 Sum_probs=75.9
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
...++|||+|||+++|+++|+++|++||.|.+|+|++++.+|+++|||||+|.+.++|.+||+.+++ .|.||.|+|.++
T Consensus 8 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a 86 (103)
T d2cqda1 8 TTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLA 86 (103)
T ss_dssp CSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEES
T ss_pred CCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEc
Confidence 3457899999999999999999999999999999999999999999999999999999999987765 799999999887
Q ss_pred ccc
Q 014086 179 QAK 181 (431)
Q Consensus 179 ~~~ 181 (431)
..+
T Consensus 87 ~~~ 89 (103)
T d2cqda1 87 YLG 89 (103)
T ss_dssp TTT
T ss_pred CCC
Confidence 643
No 57
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.2e-20 Score=142.98 Aligned_cols=105 Identities=18% Similarity=0.307 Sum_probs=88.7
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
|+.+++|||+|||+++|+++|+++|++||.|.+|++..+ +.++|||||+|.+.++|.+|++.|||..|.|+.|+|.+
T Consensus 4 p~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~ 80 (114)
T d2f9da1 4 PEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLY 80 (114)
T ss_dssp TTCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred cCCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 456789999999999999999999999999999999865 66799999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCCHHHHHHHHHhhCC
Q 014086 178 SQAKYRLFIGNIPRNWGSEDLQKVVSEVGP 207 (431)
Q Consensus 178 ~~~~~~l~v~~lp~~~~~~~l~~~f~~~g~ 207 (431)
+...... ........++.+..+...+|.
T Consensus 81 a~~~~~~--~~~~~~~~~~~~~~~~~~~g~ 108 (114)
T d2f9da1 81 YNANRAF--QKMDTKKKEEQLKLLKEKYGI 108 (114)
T ss_dssp CCHHHHT--TTSCHHHHHHHHHHHHHHHCC
T ss_pred cCCCchh--hhhHHHHHHHHHHHHHHHhCC
Confidence 8754321 223333455677888888875
No 58
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=7.4e-21 Score=132.74 Aligned_cols=75 Identities=21% Similarity=0.520 Sum_probs=70.9
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 103 EVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 103 ~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
+|||+|||+++|+++|+++|++||+|.+|+|++++.+++++|||||+|.+.++|.+||+ .++..|.|+.|.|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 59999999999999999999999999999999999999999999999999999999995 6778899999998754
No 59
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=6.2e-21 Score=134.11 Aligned_cols=76 Identities=22% Similarity=0.430 Sum_probs=72.8
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
++|||+|||+++|+++|+++|++||.|.+++|++++.++.+||||||+|.+.++|.+|+. +|++.|+||.|.|.+|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 379999999999999999999999999999999999989999999999999999999997 6999999999999987
No 60
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.2e-20 Score=131.99 Aligned_cols=77 Identities=29% Similarity=0.601 Sum_probs=73.7
Q ss_pred CCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 101 GSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 101 ~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
.++|||+|||+++|+++|+++|++||.|..+.++.++.++.++|||||+|.+.++|.+|+ .+++..|.||.|+|+.|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al-~~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV-IQKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHH-HCSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHH-HhCCCEECCEEEEEEEC
Confidence 478999999999999999999999999999999999999999999999999999999999 58999999999999865
No 61
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4.3e-20 Score=134.55 Aligned_cols=82 Identities=18% Similarity=0.382 Sum_probs=75.7
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
..+.++|||+|||+++|+++|+++|++||+|.+|+|+.+..++ +|||||+|.+.++|.+|++.+++..|.|+.|+|.+
T Consensus 5 ~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~ 82 (90)
T d2cqia1 5 DGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNW 82 (90)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 4457899999999999999999999999999999999987554 89999999999999999999999999999999999
Q ss_pred cccc
Q 014086 178 SQAK 181 (431)
Q Consensus 178 ~~~~ 181 (431)
+.+.
T Consensus 83 a~~~ 86 (90)
T d2cqia1 83 ATTP 86 (90)
T ss_dssp CCCT
T ss_pred cCCC
Confidence 8753
No 62
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.7e-20 Score=139.26 Aligned_cols=80 Identities=18% Similarity=0.330 Sum_probs=75.9
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.++|||+|||+.+|+++|+++|+.||.|.+|+|+++..++.+||||||+|.+.++|.+|+. |||..|.|+.|+|.++.+
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECCC
Confidence 4789999999999999999999999999999999999989999999999999999999995 999999999999999864
Q ss_pred C
Q 014086 355 Q 355 (431)
Q Consensus 355 ~ 355 (431)
.
T Consensus 97 ~ 97 (101)
T d2cq4a1 97 E 97 (101)
T ss_dssp H
T ss_pred C
Confidence 3
No 63
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.3e-20 Score=135.30 Aligned_cols=78 Identities=26% Similarity=0.493 Sum_probs=73.8
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEE-EEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccccc
Q 014086 104 VYIGGIPHDASEHDLRDFCQSIGEVTE-VRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQAK 181 (431)
Q Consensus 104 l~V~nLp~~~t~~~l~~~f~~~G~v~~-v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~~ 181 (431)
|||+|||+++|+++|+++|++||.|.+ +++++++.+|+++|||||+|.+.++|.+|++.+++..+.|++|+|.++.++
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k 79 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK 79 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCC
Confidence 899999999999999999999999976 478999999999999999999999999999999999999999999998764
No 64
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=1.8e-20 Score=130.71 Aligned_cols=75 Identities=15% Similarity=0.358 Sum_probs=71.0
Q ss_pred EEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 277 AVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 277 ~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
+|||+|||+++|+++|+++|++||.|..|+|++++.++.+||||||+|.+.++|.+||+ ++++.|+|+.|.|..|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 59999999999999999999999999999999999999999999999999999999997 4777999999999876
No 65
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=9.5e-20 Score=133.47 Aligned_cols=82 Identities=30% Similarity=0.522 Sum_probs=76.0
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
....++|||+|||+++|+++|+++|++||+|.+|+++.+. +.++|||||+|.+.++|.+|++.||+..|.|+.|+|.+
T Consensus 8 ~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~--~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~ 85 (93)
T d2cq3a1 8 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE--RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 85 (93)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCT--TTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccc--cCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEe
Confidence 3457889999999999999999999999999999999886 44799999999999999999999999999999999999
Q ss_pred cccc
Q 014086 178 SQAK 181 (431)
Q Consensus 178 ~~~~ 181 (431)
+.++
T Consensus 86 A~~r 89 (93)
T d2cq3a1 86 ATAR 89 (93)
T ss_dssp CCSS
T ss_pred cCcC
Confidence 9865
No 66
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=4.2e-20 Score=134.29 Aligned_cols=80 Identities=23% Similarity=0.399 Sum_probs=74.7
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccCC
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKPQ 355 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~~ 355 (431)
.+|||+|||+.+|+++|+++|+.||.|..++|+.+..+ ++|||||+|.+.++|.+|+..|||..|+|++|+|.+|+++
T Consensus 9 ~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~--~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~ 86 (89)
T d1cvja2 9 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSR 86 (89)
T ss_dssp TEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTB--CCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCT
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCC--CcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCC
Confidence 57999999999999999999999999999999988754 4799999999999999999999999999999999999876
Q ss_pred CC
Q 014086 356 AD 357 (431)
Q Consensus 356 ~~ 357 (431)
..
T Consensus 87 ~~ 88 (89)
T d1cvja2 87 KE 88 (89)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 67
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=3.5e-20 Score=133.68 Aligned_cols=77 Identities=25% Similarity=0.492 Sum_probs=72.6
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCC---CCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccccc
Q 014086 104 VYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSS---ENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQA 180 (431)
Q Consensus 104 l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g---~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~ 180 (431)
|||+|||+++|+++|+++|++||.|.+|.|++++.++ +++|||||+|.+.++|.+|++.+|+..|.|+.|+|.++..
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7999999999999999999999999999999987765 5799999999999999999999999999999999998864
No 68
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=1.6e-20 Score=141.03 Aligned_cols=83 Identities=24% Similarity=0.490 Sum_probs=78.4
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.++|||+|||+++|+++|+++|++||.|.+|+|++++.++.++|||||+|.+.++|.+|++.|||..|.|++|+|.||.+
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 36899999999999999999999999999999999998888899999999999999999999999999999999999986
Q ss_pred CCC
Q 014086 355 QAD 357 (431)
Q Consensus 355 ~~~ 357 (431)
...
T Consensus 88 ~~~ 90 (104)
T d1p1ta_ 88 EKN 90 (104)
T ss_dssp TTH
T ss_pred CCC
Confidence 544
No 69
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.81 E-value=4.7e-20 Score=132.99 Aligned_cols=80 Identities=26% Similarity=0.452 Sum_probs=70.0
Q ss_pred ccEEEEecCCCCCC-HHHHHHHHhccccEEEEEecCC-CCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 275 VKAVYVKNLPRNVT-QDQLKKLFEHHGRITKVVVPPA-KPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 275 ~~~l~V~nLp~~~t-~~~L~~~F~~~G~v~~v~i~~~-~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
.++|||+|||+++| +++|+++|++||.|.+|+|+.+ ..++.++|||||+|.+.++|.+|++ ||+..|.|+.|+|++|
T Consensus 4 ~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~a 82 (86)
T d2ghpa3 4 GREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSLA 82 (86)
T ss_dssp TTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEEC
T ss_pred CCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEEc
Confidence 37999999999986 5569999999999999999775 4677789999999999999999995 9999999999999999
Q ss_pred cCC
Q 014086 353 KPQ 355 (431)
Q Consensus 353 ~~~ 355 (431)
.++
T Consensus 83 ~~k 85 (86)
T d2ghpa3 83 DKK 85 (86)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 70
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=8e-20 Score=135.93 Aligned_cols=85 Identities=24% Similarity=0.447 Sum_probs=78.5
Q ss_pred CCCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhC------CCccCC
Q 014086 97 LPPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLN------NTEFKG 170 (431)
Q Consensus 97 ~~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~------~~~~~g 170 (431)
+..++++|||+|||+++|+++|+++|++||.|..+.++.+..+++++|||||+|.+.++|.+||+.++ +..+.|
T Consensus 4 ~~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~g 83 (98)
T d1x4ha1 4 DVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDG 83 (98)
T ss_dssp CCCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSS
T ss_pred CCCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECC
Confidence 34567899999999999999999999999999999999999999999999999999999999999887 566889
Q ss_pred eEeeecccccc
Q 014086 171 KKIRCSTSQAK 181 (431)
Q Consensus 171 ~~i~v~~~~~~ 181 (431)
|.|+|.++.++
T Consensus 84 r~l~v~~a~~k 94 (98)
T d1x4ha1 84 RQLKVDLAVTR 94 (98)
T ss_dssp CEEEEECCCCC
T ss_pred EEEEEEECCCC
Confidence 99999998764
No 71
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=1.5e-19 Score=134.38 Aligned_cols=84 Identities=23% Similarity=0.402 Sum_probs=77.6
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcC------CCccCCcEE
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTE------KYELDGQAL 347 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~------~~~~~g~~l 347 (431)
..++|||+|||+.+|+++|+++|++||.|..+.++.+..++.++|||||+|.+.++|.+|+..|| |..|.|++|
T Consensus 7 ~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l 86 (98)
T d1x4ha1 7 EGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQL 86 (98)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEE
T ss_pred CCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEE
Confidence 34789999999999999999999999999999999999999899999999999999999999886 567899999
Q ss_pred EEEeccCCCC
Q 014086 348 ECSLAKPQAD 357 (431)
Q Consensus 348 ~v~~a~~~~~ 357 (431)
+|.||.++..
T Consensus 87 ~v~~a~~k~~ 96 (98)
T d1x4ha1 87 KVDLAVTRDE 96 (98)
T ss_dssp EEECCCCCCC
T ss_pred EEEECCCCCc
Confidence 9999987543
No 72
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.80 E-value=2.9e-20 Score=134.10 Aligned_cols=81 Identities=27% Similarity=0.460 Sum_probs=71.1
Q ss_pred CCCEEEEcCCCCCCC-HHHHHHHhhccCCeEEEEEeeC-CCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 100 HGSEVYIGGIPHDAS-EHDLRDFCQSIGEVTEVRIMKG-KDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 100 ~~~~l~V~nLp~~~t-~~~l~~~f~~~G~v~~v~i~~~-~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
++++|||+|||+++| +++|+++|++||.|.+|+|+.+ ..+++++|||||+|.+.++|.+|++ +|+..|.|+.|+|.+
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 578999999999976 5569999999999999998774 5689999999999999999999995 999999999999999
Q ss_pred cccc
Q 014086 178 SQAK 181 (431)
Q Consensus 178 ~~~~ 181 (431)
+.++
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8754
No 73
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=5.8e-20 Score=129.30 Aligned_cols=75 Identities=24% Similarity=0.437 Sum_probs=72.0
Q ss_pred EEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 277 AVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 277 ~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
+|||+|||+++|+++|+++|+.||.|..+.++.++.++.++|||||+|.+.++|.+|+. +||+.|+|++|+|.+|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 59999999999999999999999999999999999888889999999999999999996 9999999999999986
No 74
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.80 E-value=1.8e-19 Score=128.99 Aligned_cols=77 Identities=21% Similarity=0.407 Sum_probs=70.9
Q ss_pred CCcccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccC-CcEEEEE
Q 014086 272 ASQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELD-GQALECS 350 (431)
Q Consensus 272 ~~~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~-g~~l~v~ 350 (431)
..++++|||+|||..+|+++|+++|+.||.|..|++++++ +|||||+|.+.++|.+|+..|||..|. |++|+|.
T Consensus 5 ~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~-----~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~ 79 (83)
T d2b0ga1 5 QPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNR-----HDIAFVEFTTELQSNAAKEALQGFKITPTHAMKIT 79 (83)
T ss_dssp CSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTT-----CSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeeccc-----ceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEE
Confidence 3456899999999999999999999999999999998764 789999999999999999999999884 6899999
Q ss_pred ecc
Q 014086 351 LAK 353 (431)
Q Consensus 351 ~a~ 353 (431)
||+
T Consensus 80 ~ak 82 (83)
T d2b0ga1 80 FAK 82 (83)
T ss_dssp ECC
T ss_pred Eec
Confidence 996
No 75
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.2e-19 Score=128.91 Aligned_cols=76 Identities=21% Similarity=0.395 Sum_probs=72.9
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
++|||+|||+++|+++|+++|++||.|..+.+..++.++.++|||||+|.+.++|.+|+. +||..|+||+|+|..|
T Consensus 3 r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 3 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp SEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 799999999999999999999999999999999999999999999999999999999985 8999999999999876
No 76
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=5.5e-20 Score=129.41 Aligned_cols=75 Identities=23% Similarity=0.628 Sum_probs=72.0
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 103 EVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 103 ~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
+|||+|||+++|+++|+++|++||.|..+.++.++.++.++|||||+|.+.++|.+|++ +++..|.||.|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 49999999999999999999999999999999999999999999999999999999995 9999999999999864
No 77
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.4e-19 Score=135.37 Aligned_cols=84 Identities=26% Similarity=0.487 Sum_probs=77.7
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCe--------EEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccC
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEV--------TEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFK 169 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v--------~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~ 169 (431)
....++|||+|||+++|+++|+++|+.||.| ..+.+..++.+|+++|||||+|.+.++|.+|++.||+..|.
T Consensus 5 ~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~ 84 (101)
T d2cpea1 5 DSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQ 84 (101)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEET
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEEC
Confidence 4567899999999999999999999999987 46778888889999999999999999999999999999999
Q ss_pred CeEeeecccccc
Q 014086 170 GKKIRCSTSQAK 181 (431)
Q Consensus 170 g~~i~v~~~~~~ 181 (431)
||.|+|.++.++
T Consensus 85 gr~i~V~~a~~~ 96 (101)
T d2cpea1 85 GSKLKVSLARKK 96 (101)
T ss_dssp TEECEEECSSCC
T ss_pred CEEEEEEEcCCC
Confidence 999999998754
No 78
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=7.7e-20 Score=132.87 Aligned_cols=79 Identities=20% Similarity=0.436 Sum_probs=73.9
Q ss_pred CCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccccc
Q 014086 101 GSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQA 180 (431)
Q Consensus 101 ~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~ 180 (431)
..+|||+|||+++|+++|+++|++||.|..|+|+.+. +.++|||||+|.+.++|.+|++.|||..|.|+.|+|.++.+
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~ 85 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 85 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 4689999999999999999999999999999999886 44789999999999999999999999999999999999876
Q ss_pred c
Q 014086 181 K 181 (431)
Q Consensus 181 ~ 181 (431)
+
T Consensus 86 ~ 86 (89)
T d1cvja2 86 R 86 (89)
T ss_dssp T
T ss_pred C
Confidence 4
No 79
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2e-19 Score=134.43 Aligned_cols=85 Identities=22% Similarity=0.336 Sum_probs=76.9
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEE--------EEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRIT--------KVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQ 345 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~--------~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~ 345 (431)
..++|||+|||+.+|+++|+++|+.||.|. .+.+..+..++.++|||||+|.+.++|.+|+..|||..|.|+
T Consensus 7 ~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr 86 (101)
T d2cpea1 7 DNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGS 86 (101)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETTE
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECCE
Confidence 347999999999999999999999999874 567778888888899999999999999999999999999999
Q ss_pred EEEEEeccCCCCC
Q 014086 346 ALECSLAKPQADQ 358 (431)
Q Consensus 346 ~l~v~~a~~~~~~ 358 (431)
+|+|.+|+++..+
T Consensus 87 ~i~V~~a~~~~p~ 99 (101)
T d2cpea1 87 KLKVSLARKKPPM 99 (101)
T ss_dssp ECEEECSSCCCCS
T ss_pred EEEEEEcCCCCCC
Confidence 9999999875543
No 80
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.6e-19 Score=131.61 Aligned_cols=76 Identities=22% Similarity=0.447 Sum_probs=71.6
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.++|||+|||..+++++|+++|++||.|.+|+|+++ ||||||+|.+.++|.+|+..|||..|.|+.|+|.|+++
T Consensus 18 ~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~ 91 (96)
T d1x4ga1 18 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 91 (96)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 368999999999999999999999999999999987 59999999999999999999999999999999999976
Q ss_pred CC
Q 014086 355 QA 356 (431)
Q Consensus 355 ~~ 356 (431)
..
T Consensus 92 ~p 93 (96)
T d1x4ga1 92 SP 93 (96)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 81
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=3.9e-19 Score=130.79 Aligned_cols=81 Identities=20% Similarity=0.441 Sum_probs=74.3
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
...+++|||+|||+++|+++|+++|++||.|..+.+..+ +.+++||||+|.+.++|.+|++.||+..|.|++|+|.+
T Consensus 11 ~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~ 87 (95)
T d1x4aa1 11 GNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 87 (95)
T ss_dssp CCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEEC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEe
Confidence 456789999999999999999999999999999998655 55799999999999999999999999999999999999
Q ss_pred cccc
Q 014086 178 SQAK 181 (431)
Q Consensus 178 ~~~~ 181 (431)
+.+.
T Consensus 88 a~~~ 91 (95)
T d1x4aa1 88 PRSG 91 (95)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 8754
No 82
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=2.7e-19 Score=128.39 Aligned_cols=77 Identities=25% Similarity=0.457 Sum_probs=72.1
Q ss_pred CCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccc
Q 014086 101 GSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQ 179 (431)
Q Consensus 101 ~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~ 179 (431)
.++|||+|||+++|+++|+++|+.||+|..|+|..+. +|+++|||||+|.+.++|.+||+ +++..+.|+.|.|.+..
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 6899999999999999999999999999999998875 79999999999999999999994 79999999999998754
No 83
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=3e-19 Score=131.32 Aligned_cols=79 Identities=29% Similarity=0.578 Sum_probs=73.5
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
.+..++|||+|||.++++++|+++|++||.|.+|+|+++ +|||||+|.+.++|.+|+..|++..|.|+.|+|.+
T Consensus 15 ~~~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ 88 (96)
T d1x4ga1 15 SPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYW 88 (96)
T ss_dssp CSSCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEC
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 445689999999999999999999999999999999875 89999999999999999999999999999999999
Q ss_pred ccccc
Q 014086 178 SQAKY 182 (431)
Q Consensus 178 ~~~~~ 182 (431)
+.++.
T Consensus 89 ak~~p 93 (96)
T d1x4ga1 89 GKESP 93 (96)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 87653
No 84
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=6.1e-19 Score=133.80 Aligned_cols=76 Identities=26% Similarity=0.351 Sum_probs=70.7
Q ss_pred cEEEEecCC-CCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 276 KAVYVKNLP-RNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 276 ~~l~V~nLp-~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
++|||+||| ..+|+++|+++|+.||.|..|+|++++ +|||||+|.+.++|.+|+..|||..|.|+.|+|.|++.
T Consensus 3 ~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~ 77 (109)
T d2adca1 3 SVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKH 77 (109)
T ss_dssp SEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSC
T ss_pred CEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 699999995 469999999999999999999999875 79999999999999999999999999999999999875
Q ss_pred CC
Q 014086 355 QA 356 (431)
Q Consensus 355 ~~ 356 (431)
..
T Consensus 78 ~~ 79 (109)
T d2adca1 78 QN 79 (109)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 85
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=5.7e-19 Score=129.90 Aligned_cols=78 Identities=22% Similarity=0.432 Sum_probs=71.5
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.++|||+|||+.+|+++|+++|+.||.|..+.+..+. .++|||||+|.+.++|..||+.||++.|.|++|+|.||++
T Consensus 14 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~---~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~ 90 (95)
T d1x4aa1 14 DCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRR---GGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRS 90 (95)
T ss_dssp SSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSS---SSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHhcCCceEEEEecccc---cccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccC
Confidence 4689999999999999999999999999999987654 2479999999999999999999999999999999999975
Q ss_pred C
Q 014086 355 Q 355 (431)
Q Consensus 355 ~ 355 (431)
.
T Consensus 91 ~ 91 (95)
T d1x4aa1 91 G 91 (95)
T ss_dssp C
T ss_pred C
Confidence 3
No 86
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=8.6e-19 Score=131.53 Aligned_cols=83 Identities=22% Similarity=0.420 Sum_probs=72.9
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCC-CCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAK-PGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~-~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
+.++|||+|||+++|+++|+++|+.|| |..++++.+. .++.++|||||+|.+.++|++|+ .||+..|.|+.|+|.+|
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEEC
Confidence 458999999999999999999999999 7788877765 45677999999999999998776 59999999999999999
Q ss_pred cCCCCC
Q 014086 353 KPQADQ 358 (431)
Q Consensus 353 ~~~~~~ 358 (431)
.+....
T Consensus 92 ~~~~~~ 97 (104)
T d1wi8a_ 92 DQAQDK 97 (104)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 876554
No 87
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=5e-20 Score=138.00 Aligned_cols=85 Identities=24% Similarity=0.316 Sum_probs=78.9
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
++++|||+|||..+++++|+++|+.||.|..+.+..+..++.++|||||+|.+.++|.+|+..|||..|.|++|+|.||+
T Consensus 17 ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak 96 (102)
T d2cpxa1 17 PNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 96 (102)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCC
Confidence 45799999999999999999999999999999888887777789999999999999999999999999999999999999
Q ss_pred CCCCC
Q 014086 354 PQADQ 358 (431)
Q Consensus 354 ~~~~~ 358 (431)
++..+
T Consensus 97 ~k~~r 101 (102)
T d2cpxa1 97 NKKQR 101 (102)
T ss_dssp CCSCC
T ss_pred CcccC
Confidence 86553
No 88
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3.1e-19 Score=132.89 Aligned_cols=80 Identities=20% Similarity=0.416 Sum_probs=74.8
Q ss_pred CCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccc
Q 014086 100 HGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQ 179 (431)
Q Consensus 100 ~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~ 179 (431)
+.++|||+|||+++|+++|+++|++||.|..+.++.+. +++++|||||+|.+.++|.+|++.|||..|.||++.|.++.
T Consensus 17 ~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~ 95 (101)
T d1x5oa1 17 DPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTE 95 (101)
T ss_dssp CTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCC
Confidence 45899999999999999999999999999999998884 68999999999999999999999999999999999998766
Q ss_pred c
Q 014086 180 A 180 (431)
Q Consensus 180 ~ 180 (431)
+
T Consensus 96 P 96 (101)
T d1x5oa1 96 P 96 (101)
T ss_dssp C
T ss_pred C
Confidence 4
No 89
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=6.3e-19 Score=129.98 Aligned_cols=75 Identities=23% Similarity=0.382 Sum_probs=68.4
Q ss_pred ccEEEEecCC-CCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 275 VKAVYVKNLP-RNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 275 ~~~l~V~nLp-~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
..+|||+||| ..+++++|+++|++||.|.+|+| +||||||+|.+.++|.+|+..|||+.|.|++|+|.|++
T Consensus 15 ~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 86 (98)
T d1wf2a_ 15 NSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAA 86 (98)
T ss_dssp CCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETT
T ss_pred CcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 3689999996 57889999999999999999998 26999999999999999999999999999999999998
Q ss_pred CCCC
Q 014086 354 PQAD 357 (431)
Q Consensus 354 ~~~~ 357 (431)
++..
T Consensus 87 ~~~~ 90 (98)
T d1wf2a_ 87 EPKV 90 (98)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 6543
No 90
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.2e-18 Score=130.47 Aligned_cols=85 Identities=19% Similarity=0.230 Sum_probs=75.6
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
...+|||+|||+++|+++|+++|+.||.|..+.++.+..++.++|||||+|.+.++|.+|+. +|+..|.||.|+|.+++
T Consensus 14 ~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~~ 92 (104)
T d1wg5a_ 14 NDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKSS 92 (104)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEEC
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEECC
Confidence 44689999999999999999999999999886666666677779999999999999999996 89999999999999998
Q ss_pred CCCCCC
Q 014086 354 PQADQK 359 (431)
Q Consensus 354 ~~~~~~ 359 (431)
+.....
T Consensus 93 ~~~~~~ 98 (104)
T d1wg5a_ 93 RAEVRT 98 (104)
T ss_dssp TTTSCC
T ss_pred HHHhcc
Confidence 776544
No 91
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=6.3e-19 Score=134.73 Aligned_cols=78 Identities=18% Similarity=0.341 Sum_probs=72.2
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
+++|||+|||+.+|+++|+++|++||.|.+|++..+. .++|||||+|.+.++|..|+..|||..|.|+.|+|.++.+
T Consensus 7 ~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~---~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~ 83 (114)
T d2f9da1 7 NRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTP---ETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNA 83 (114)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECST---TTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCH
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccC---CcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 4799999999999999999999999999999998654 3479999999999999999999999999999999999875
Q ss_pred C
Q 014086 355 Q 355 (431)
Q Consensus 355 ~ 355 (431)
.
T Consensus 84 ~ 84 (114)
T d2f9da1 84 N 84 (114)
T ss_dssp H
T ss_pred C
Confidence 4
No 92
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=4.6e-19 Score=127.50 Aligned_cols=75 Identities=28% Similarity=0.509 Sum_probs=71.3
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccCC
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKPQ 355 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~~ 355 (431)
++|||+|||.++++++|+++|++||.|.+|++.++ +|||||+|.+.++|.+|+..|||..|.|++|+|.||.+.
T Consensus 9 ~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~ 82 (86)
T d2cpja1 9 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHS 82 (86)
T ss_dssp TEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCc
Confidence 57999999999999999999999999999999876 589999999999999999999999999999999999866
Q ss_pred C
Q 014086 356 A 356 (431)
Q Consensus 356 ~ 356 (431)
.
T Consensus 83 ~ 83 (86)
T d2cpja1 83 A 83 (86)
T ss_dssp S
T ss_pred C
Confidence 4
No 93
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.77 E-value=2.7e-20 Score=135.52 Aligned_cols=81 Identities=17% Similarity=0.337 Sum_probs=74.5
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
+...++|||+|||+++|+++|+++|+.||.|..+.|+.+ .+|+++|||||+|.+.++|.+||+ +++..|.|+.|+|.+
T Consensus 10 ~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ 87 (91)
T d1fjeb1 10 STTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEK 87 (91)
T ss_dssp CSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEEC
T ss_pred CCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEe
Confidence 556779999999999999999999999999999988654 679999999999999999999995 999999999999998
Q ss_pred ccc
Q 014086 178 SQA 180 (431)
Q Consensus 178 ~~~ 180 (431)
+..
T Consensus 88 ak~ 90 (91)
T d1fjeb1 88 PKG 90 (91)
T ss_dssp CCC
T ss_pred cCC
Confidence 875
No 94
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=4.7e-19 Score=127.47 Aligned_cols=78 Identities=29% Similarity=0.534 Sum_probs=72.5
Q ss_pred CCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccc
Q 014086 100 HGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQ 179 (431)
Q Consensus 100 ~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~ 179 (431)
..++|||+|||+++++++|+++|++||.|.+|++.++ +|||||+|.+.++|.+|++.||+..|.|+.|+|+++.
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~ 80 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFAC 80 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 3578999999999999999999999999999999765 7899999999999999999999999999999999998
Q ss_pred cccc
Q 014086 180 AKYR 183 (431)
Q Consensus 180 ~~~~ 183 (431)
....
T Consensus 81 ~~~~ 84 (86)
T d2cpja1 81 HSAS 84 (86)
T ss_dssp CCSC
T ss_pred CcCC
Confidence 7644
No 95
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.77 E-value=6.6e-19 Score=122.99 Aligned_cols=74 Identities=18% Similarity=0.262 Sum_probs=68.2
Q ss_pred CEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 102 SEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 102 ~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
++|||+|||+++++++|+++|+.||.|..|+++.++.. .++||||+|.+.++|.+|| .+++..|.|++|.|..+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~--~~~~afV~F~~~~~a~~Al-~~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKK--NFRFARIEFARYDGALAAI-TKTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTS--SSEEEEEEESSHHHHHHHH-TTTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccc--cceEEEEEEcchHHhHHHH-HhcCcEECCEEEEEEEC
Confidence 58999999999999999999999999999999998753 4679999999999999999 58999999999999754
No 96
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.5e-19 Score=125.82 Aligned_cols=71 Identities=25% Similarity=0.560 Sum_probs=69.0
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEee
Q 014086 104 VYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIR 174 (431)
Q Consensus 104 l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~ 174 (431)
|||+|||+++|+++|+++|++||.|..+++.+++.++.++|||||+|.+.++|.+|++.|||..|.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999874
No 97
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.2e-18 Score=128.49 Aligned_cols=83 Identities=14% Similarity=0.292 Sum_probs=73.9
Q ss_pred cEEEEecCCCCCCHHHHHHHHhcccc-EEEEEecCCC-CCCCcCCEEEEEeCCHHHHHHHHHhcCC--CccCCcEEEEEe
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGR-ITKVVVPPAK-PGQEKNRIGFVHFAERSSAMKALKNTEK--YELDGQALECSL 351 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~-v~~v~i~~~~-~~~~~rg~afV~F~~~~~A~~Al~~l~~--~~~~g~~l~v~~ 351 (431)
++|||+|||..+|+++|+++|+.||. |..|+++++. .++.++|||||+|.++++|.+|+..|++ ..+.|+.|+|.|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 58999999999999999999999996 9999999885 4566799999999999999999999864 456799999999
Q ss_pred ccCCCCC
Q 014086 352 AKPQADQ 358 (431)
Q Consensus 352 a~~~~~~ 358 (431)
|++....
T Consensus 82 A~p~~~~ 88 (96)
T d2disa1 82 AEPEIDV 88 (96)
T ss_dssp SCSSCST
T ss_pred cCCCCCC
Confidence 9876654
No 98
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=2.5e-19 Score=129.41 Aligned_cols=74 Identities=19% Similarity=0.272 Sum_probs=68.9
Q ss_pred EEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccCCC
Q 014086 277 AVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKPQA 356 (431)
Q Consensus 277 ~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~~~ 356 (431)
+|||+|||+.+|+++|+++|++||.|.++++.++ |||||+|.+.++|.+||..|||..|.|+.|+|.++++..
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~ 74 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKV 74 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCc
Confidence 6999999999999999999999999999999764 899999999999999999999999999999999887554
Q ss_pred C
Q 014086 357 D 357 (431)
Q Consensus 357 ~ 357 (431)
.
T Consensus 75 ~ 75 (87)
T d3begb1 75 D 75 (87)
T ss_dssp C
T ss_pred C
Confidence 3
No 99
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=3.5e-19 Score=129.07 Aligned_cols=78 Identities=21% Similarity=0.385 Sum_probs=71.2
Q ss_pred CCCCEEEEcCCCCCCCHHHH---HHHhhccCCeEEEEEeeCCCCCCC---cceEEEEecCHHHHHHHHHHhCCCccCCeE
Q 014086 99 PHGSEVYIGGIPHDASEHDL---RDFCQSIGEVTEVRIMKGKDSSEN---KGFAFVTFRNVELASKAIDKLNNTEFKGKK 172 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l---~~~f~~~G~v~~v~i~~~~~~g~~---~g~afV~f~~~e~a~~al~~l~~~~~~g~~ 172 (431)
...++|||+|||+++++++| +++|++||.|.+|.|++++.++.+ +|||||+|.+.++|.+|++.|||..|.||.
T Consensus 6 iq~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~ 85 (89)
T d2cpia1 6 VQKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRT 85 (89)
T ss_dssp CCSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEE
T ss_pred EecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEE
Confidence 34678999999999999999 678999999999999999877654 489999999999999999999999999999
Q ss_pred eeec
Q 014086 173 IRCS 176 (431)
Q Consensus 173 i~v~ 176 (431)
|+|+
T Consensus 86 lkvS 89 (89)
T d2cpia1 86 LKAS 89 (89)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9984
No 100
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=8.6e-20 Score=136.72 Aligned_cols=83 Identities=23% Similarity=0.295 Sum_probs=78.7
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
.++++|||+|||.++++++|+++|++||.|..+.++.+..+|+++|||||+|.+.++|.+|++.||+..|.|+.|+|.++
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 35789999999999999999999999999999999998888999999999999999999999999999999999999998
Q ss_pred ccc
Q 014086 179 QAK 181 (431)
Q Consensus 179 ~~~ 181 (431)
.++
T Consensus 96 k~k 98 (102)
T d2cpxa1 96 KNK 98 (102)
T ss_dssp CCC
T ss_pred CCc
Confidence 864
No 101
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.2e-18 Score=126.39 Aligned_cols=78 Identities=22% Similarity=0.393 Sum_probs=69.8
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCcc-CCcEEEEEec
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYEL-DGQALECSLA 352 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~-~g~~l~v~~a 352 (431)
++++|||+|||.++|+++|+++|+.||.|..+.+...+ ++|||||+|.+.++|.+|+..|||..| +|+.|+|+|+
T Consensus 9 Ps~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~----~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~s 84 (88)
T d2adca2 9 PSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQK----DRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFS 84 (88)
T ss_dssp SCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSS----STTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEEC
T ss_pred CCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeec----ccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeC
Confidence 45799999999999999999999999999888776543 368999999999999999999999988 5899999999
Q ss_pred cCC
Q 014086 353 KPQ 355 (431)
Q Consensus 353 ~~~ 355 (431)
++.
T Consensus 85 k~~ 87 (88)
T d2adca2 85 KST 87 (88)
T ss_dssp SSC
T ss_pred CCC
Confidence 853
No 102
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=3e-19 Score=129.00 Aligned_cols=80 Identities=19% Similarity=0.286 Sum_probs=71.7
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
+..++|||+|||+++++++|+++|+.||.|....++....+|+++|+|||+|.+.++|.+|++.||+..|.||+|+|+++
T Consensus 7 p~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 7 PGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp CSSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 44678999999999999999999999999977544555577999999999999999999999999999999999999753
No 103
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.76 E-value=1.3e-18 Score=124.44 Aligned_cols=77 Identities=17% Similarity=0.324 Sum_probs=70.2
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCcc-CCeEeeec
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEF-KGKKIRCS 176 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~-~g~~i~v~ 176 (431)
.+++++|||+|||.++|+++|+++|+.||.|..|+++++ .+|||||+|.+.++|.+|+..|+|..| .|+.|+|.
T Consensus 5 ~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~-----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~ 79 (83)
T d2b0ga1 5 QPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPN-----RHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKIT 79 (83)
T ss_dssp CSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTT-----TCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecc-----cceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEE
Confidence 445799999999999999999999999999999999765 378999999999999999999999888 47899999
Q ss_pred ccc
Q 014086 177 TSQ 179 (431)
Q Consensus 177 ~~~ 179 (431)
++.
T Consensus 80 ~ak 82 (83)
T d2b0ga1 80 FAK 82 (83)
T ss_dssp ECC
T ss_pred Eec
Confidence 875
No 104
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.76 E-value=1.2e-18 Score=121.66 Aligned_cols=74 Identities=27% Similarity=0.372 Sum_probs=68.5
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
++|||+|||+++++++|+++|+.||.|..|++.+++.+. ++||||+|.+.++|.+|+. +|+..|+|++|.|..+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~--~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKN--FRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSS--SEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeecccc--ceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 479999999999999999999999999999999987665 4799999999999999985 8999999999999876
No 105
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=8.8e-19 Score=131.21 Aligned_cols=83 Identities=20% Similarity=0.281 Sum_probs=75.8
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
.....+|||+|||+++|+++|+++|+.||.|..+.++.+..+++++|||||+|.++++|.+|++ +|+..|.||.|+|.+
T Consensus 12 ~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~ 90 (104)
T d1wg5a_ 12 TANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFK 90 (104)
T ss_dssp CSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEE
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEE
Confidence 3356789999999999999999999999999988888888889999999999999999999995 899999999999988
Q ss_pred cccc
Q 014086 178 SQAK 181 (431)
Q Consensus 178 ~~~~ 181 (431)
+...
T Consensus 91 ~~~~ 94 (104)
T d1wg5a_ 91 SSRA 94 (104)
T ss_dssp ECTT
T ss_pred CCHH
Confidence 7754
No 106
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.76 E-value=8.5e-19 Score=129.24 Aligned_cols=82 Identities=24% Similarity=0.417 Sum_probs=72.9
Q ss_pred CcccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 273 SQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 273 ~~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
...++|||+|||+++|+++|+++|++||.|..++. .+.++|||||+|.+.++|.+|+..|||..|.|++|+|.|+
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~-----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a 88 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQ-----DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYT 88 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEE-----TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeee-----cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 44589999999999999999999999999876654 3345899999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 014086 353 KPQADQK 359 (431)
Q Consensus 353 ~~~~~~~ 359 (431)
.++...+
T Consensus 89 ~~k~~~r 95 (96)
T d1fjca_ 89 GEKGGTR 95 (96)
T ss_dssp SSSCCCC
T ss_pred CCCCCCC
Confidence 9876643
No 107
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=1.4e-18 Score=132.37 Aligned_cols=78 Identities=21% Similarity=0.291 Sum_probs=71.7
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
..++|||+|||+.+++++|+++|+.||.|..|.|.+. +|||||+|.+.++|.+|+..|||..|.|++|.|.|+.
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~~------kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~ 82 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEG------GITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAP 82 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCSS------SSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEeecc------CceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECC
Confidence 3479999999999999999999999999999999653 6999999999999999999999999999999999997
Q ss_pred CCCC
Q 014086 354 PQAD 357 (431)
Q Consensus 354 ~~~~ 357 (431)
....
T Consensus 83 ~~~~ 86 (111)
T d1whxa_ 83 IGVF 86 (111)
T ss_dssp TTTT
T ss_pred CCcc
Confidence 6543
No 108
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=7.7e-19 Score=124.28 Aligned_cols=74 Identities=22% Similarity=0.365 Sum_probs=68.9
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
.+++|||+||+ +|+++|+++|++||.|.+|++.++ +|||||+|.+.++|.+|+..|||..|.|++|+|.||+
T Consensus 4 ~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~ 75 (79)
T d2bz2a1 4 KGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIAR 75 (79)
T ss_dssp CCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECC
T ss_pred CCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEec
Confidence 34799999996 899999999999999999999875 5899999999999999999999999999999999998
Q ss_pred CC
Q 014086 354 PQ 355 (431)
Q Consensus 354 ~~ 355 (431)
++
T Consensus 76 ~~ 77 (79)
T d2bz2a1 76 KQ 77 (79)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 109
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=5e-19 Score=128.08 Aligned_cols=77 Identities=25% Similarity=0.447 Sum_probs=69.5
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
+++|||+|||+.+|+++|+++|++||.|..|++..+. +|||||+|.+.++|.+|+. +++.|+|++|+|.+|.+
T Consensus 5 s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~-----~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~ 77 (88)
T d1wf0a_ 5 SSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPF-----RAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEP 77 (88)
T ss_dssp CCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCSSC-----CSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEeecc-----CceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCC
Confidence 4799999999999999999999999999999887653 7999999999999999985 78899999999999986
Q ss_pred CCCC
Q 014086 355 QADQ 358 (431)
Q Consensus 355 ~~~~ 358 (431)
+...
T Consensus 78 k~~~ 81 (88)
T d1wf0a_ 78 KHNS 81 (88)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 110
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.76 E-value=1.6e-19 Score=131.31 Aligned_cols=80 Identities=18% Similarity=0.220 Sum_probs=72.3
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
..++|||+|||+++|+++|+++|+.||.|..++|+.+ .++.++|||||+|.+.++|.+||+ |||..|.|++|+|.+|+
T Consensus 12 ~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 12 TPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp SSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCC
T ss_pred CCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecC
Confidence 4479999999999999999999999999999888654 455669999999999999999996 99999999999999998
Q ss_pred CC
Q 014086 354 PQ 355 (431)
Q Consensus 354 ~~ 355 (431)
.+
T Consensus 90 ~k 91 (91)
T d1fjeb1 90 GR 91 (91)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 111
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.7e-18 Score=124.89 Aligned_cols=77 Identities=32% Similarity=0.476 Sum_probs=70.4
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.++|||+|||+.+|+++|+++|++||.|..+.+.+. +|||||+|.+.++|.+|+..|||..|.|+.|+|.||+|
T Consensus 8 ~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~~------rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP 81 (86)
T d2cpda1 8 VKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKI------RDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKP 81 (86)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEEC------SSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEccc------cEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccC
Confidence 478999999999999999999999999887777443 69999999999999999999999999999999999987
Q ss_pred CCC
Q 014086 355 QAD 357 (431)
Q Consensus 355 ~~~ 357 (431)
...
T Consensus 82 ~~~ 84 (86)
T d2cpda1 82 VDK 84 (86)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 112
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.4e-18 Score=124.59 Aligned_cols=76 Identities=22% Similarity=0.326 Sum_probs=70.6
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
++|||+|||..+|+++|+++|+.||.|..|+|..+. ++.++|||||+|.+.++|.+||+ +++..|.|+.|.|.|+.
T Consensus 7 rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 7 RSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp TEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 799999999999999999999999999999998876 45569999999999999999995 79999999999999864
No 113
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=3.1e-19 Score=126.61 Aligned_cols=77 Identities=23% Similarity=0.366 Sum_probs=69.4
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCC-ccCCcEEEEEeccC
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKY-ELDGQALECSLAKP 354 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~-~~~g~~l~v~~a~~ 354 (431)
.+|||+|||.++|+++|+++|++||.|..+++.+. ||||||+|.+.++|.+|++.|||. .|.|++|+|.||.+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~~------rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLK------SGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEEE------TTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEecc------cceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCC
Confidence 47999999999999999999999999887766653 699999999999999999999986 59999999999998
Q ss_pred CCCC
Q 014086 355 QADQ 358 (431)
Q Consensus 355 ~~~~ 358 (431)
+..+
T Consensus 76 k~~r 79 (80)
T d2cqha1 76 KKLR 79 (80)
T ss_dssp CCCC
T ss_pred cCcC
Confidence 6553
No 114
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=4.9e-19 Score=131.78 Aligned_cols=79 Identities=11% Similarity=0.276 Sum_probs=73.0
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.++|||+|||+++|+++|+++|+.||.|..+++..+. ++.++|||||+|.+.++|.+|++.|||..|.|+++.|.++.|
T Consensus 18 ~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~P 96 (101)
T d1x5oa1 18 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 96 (101)
T ss_dssp TTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSSC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHhhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCCC
Confidence 4789999999999999999999999999999998885 456699999999999999999999999999999999888765
No 115
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.2e-18 Score=124.92 Aligned_cols=79 Identities=25% Similarity=0.370 Sum_probs=71.1
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCcc-CCeEeeec
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEF-KGKKIRCS 176 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~-~g~~i~v~ 176 (431)
.+++++|||+|||+++|+++|+++|+.||.|..+.++. ++++|||||+|.+.++|.+|+..|++..+ .|+.|+|.
T Consensus 7 ~pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~----~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~ 82 (88)
T d2adca2 7 FPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFF----QKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVS 82 (88)
T ss_dssp CCSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEEC----SSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEee----ecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEE
Confidence 35689999999999999999999999999999887765 34589999999999999999999999988 58999999
Q ss_pred cccc
Q 014086 177 TSQA 180 (431)
Q Consensus 177 ~~~~ 180 (431)
++++
T Consensus 83 ~sk~ 86 (88)
T d2adca2 83 FSKS 86 (88)
T ss_dssp ECSS
T ss_pred eCCC
Confidence 8864
No 116
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.9e-19 Score=124.33 Aligned_cols=71 Identities=25% Similarity=0.357 Sum_probs=68.4
Q ss_pred EEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEE
Q 014086 278 VYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALE 348 (431)
Q Consensus 278 l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~ 348 (431)
|||+|||.++|+++|+++|++||.|..+++.+++.++.++|||||+|.+.++|.+|+..|||..|.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999999999999999999999999999999999999999999998764
No 117
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=7.3e-19 Score=127.33 Aligned_cols=76 Identities=21% Similarity=0.423 Sum_probs=69.2
Q ss_pred ccEEEEecCCCCCCHHHH---HHHHhccccEEEEEecCCCCCCCc---CCEEEEEeCCHHHHHHHHHhcCCCccCCcEEE
Q 014086 275 VKAVYVKNLPRNVTQDQL---KKLFEHHGRITKVVVPPAKPGQEK---NRIGFVHFAERSSAMKALKNTEKYELDGQALE 348 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L---~~~F~~~G~v~~v~i~~~~~~~~~---rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~ 348 (431)
.++|||+|||+.+++++| +++|++||.|..|.|++++.+..+ +|||||+|.+.++|.+|+..|||..|.|+.|+
T Consensus 8 ~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lk 87 (89)
T d2cpia1 8 KNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLK 87 (89)
T ss_dssp SSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred cCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEE
Confidence 368999999999999999 678999999999999998766543 48999999999999999999999999999999
Q ss_pred EE
Q 014086 349 CS 350 (431)
Q Consensus 349 v~ 350 (431)
|+
T Consensus 88 vS 89 (89)
T d2cpia1 88 AS 89 (89)
T ss_dssp EE
T ss_pred EC
Confidence 85
No 118
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.5e-18 Score=122.80 Aligned_cols=76 Identities=22% Similarity=0.451 Sum_probs=70.6
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
|..+++|||+||+ +|+++|+++|++||.|.+|++.++ +|||||+|.+.++|.+|++.||+..|.|++|+|.+
T Consensus 2 p~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~ 73 (79)
T d2bz2a1 2 PRKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNI 73 (79)
T ss_dssp CCCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEE
T ss_pred CCCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEE
Confidence 6788999999996 899999999999999999999654 78999999999999999999999999999999999
Q ss_pred cccc
Q 014086 178 SQAK 181 (431)
Q Consensus 178 ~~~~ 181 (431)
+.++
T Consensus 74 a~~~ 77 (79)
T d2bz2a1 74 ARKQ 77 (79)
T ss_dssp CCSS
T ss_pred ecCC
Confidence 8754
No 119
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=5.2e-19 Score=127.73 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=68.8
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
.++|||+|||+++++++|+++|+.||.|....++....++.++|+|||+|.+.++|.+|++.||+..|.||+|+|+++
T Consensus 9 ~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 9 PTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 468999999999999999999999999876433333445667999999999999999999999999999999999986
No 120
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=3e-18 Score=126.26 Aligned_cols=77 Identities=18% Similarity=0.262 Sum_probs=71.3
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
..+|||+|||+.+++++|+++|++||.|..+.|.+ +|||||+|.+.++|.+||+.|||..|.|+.|+|.++++
T Consensus 15 ~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~ 87 (98)
T d1wg4a_ 15 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 87 (98)
T ss_dssp SCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEec
Confidence 46899999999999999999999999999999864 48999999999999999999999999999999999986
Q ss_pred CCCC
Q 014086 355 QADQ 358 (431)
Q Consensus 355 ~~~~ 358 (431)
...+
T Consensus 88 ~~~~ 91 (98)
T d1wg4a_ 88 YPER 91 (98)
T ss_dssp ECCC
T ss_pred CCCC
Confidence 5543
No 121
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=1e-18 Score=133.06 Aligned_cols=76 Identities=16% Similarity=0.173 Sum_probs=70.1
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
+.+++|||+|||+++++++|+++|++||.|..|.|. +++|||||+|.+.++|.+|++.|||..|.|+.|.|.++
T Consensus 8 r~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~------~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a 81 (111)
T d1whxa_ 8 RSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLP------EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWA 81 (111)
T ss_dssp EEEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECC------SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEE
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhhccCCccEEEee------ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEEC
Confidence 346899999999999999999999999999999884 35899999999999999999999999999999999887
Q ss_pred cc
Q 014086 179 QA 180 (431)
Q Consensus 179 ~~ 180 (431)
..
T Consensus 82 ~~ 83 (111)
T d1whxa_ 82 PI 83 (111)
T ss_dssp ET
T ss_pred CC
Confidence 54
No 122
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.3e-18 Score=129.20 Aligned_cols=80 Identities=21% Similarity=0.528 Sum_probs=71.9
Q ss_pred CCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCC-CCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 100 HGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGK-DSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 100 ~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~-~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
+.++|||+|||+++|+++|+++|+.|| |..++++.+. .+++++|||||+|.+.++|++|+ .||+..|.||.|+|.++
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEEC
Confidence 358999999999999999999999999 7777777765 47899999999999999999888 69999999999999998
Q ss_pred ccc
Q 014086 179 QAK 181 (431)
Q Consensus 179 ~~~ 181 (431)
.++
T Consensus 92 ~~~ 94 (104)
T d1wi8a_ 92 DQA 94 (104)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 123
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.4e-18 Score=129.47 Aligned_cols=83 Identities=18% Similarity=0.264 Sum_probs=72.2
Q ss_pred CcccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 273 SQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 273 ~~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
....+|||+|||+++|+++|+++|..||. ..|+++.+..+ .++|||||+|.+.++|.+|++ +|+..|+||.|+|.++
T Consensus 13 ~~~~~v~v~nLp~~~te~dl~~~F~~~~~-~~v~~~~~~~g-~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s 89 (102)
T d1weza_ 13 TTGHCVHMRGLPYRATENDIYNFFSPLNP-MRVHIEIGPDG-RVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLN 89 (102)
T ss_dssp SSSCEEEEESCCTTCCHHHHHHSSCSCCC-SEEEEEESSSS-CEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHhccCc-ceeeeEEecCC-cceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEc
Confidence 34479999999999999999999999984 57777777655 458999999999999999986 8999999999999999
Q ss_pred cCCCCC
Q 014086 353 KPQADQ 358 (431)
Q Consensus 353 ~~~~~~ 358 (431)
.+....
T Consensus 90 ~~~~~~ 95 (102)
T d1weza_ 90 STAGTS 95 (102)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 876543
No 124
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2e-18 Score=124.74 Aligned_cols=76 Identities=22% Similarity=0.345 Sum_probs=66.1
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
+++|||+|||+++++++|+++|++||. ..+.+.+ ++|||||+|.+.++|.+|+..||+..|.|++|+|+|++.
T Consensus 5 s~~i~V~nLp~~~t~~~l~~lF~~~G~-~~~~~~~------~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~ 77 (88)
T d1wg1a_ 5 SSGILVKNLPQDSNCQEVHDLLKDYDL-KYCYVDR------NKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPT 77 (88)
T ss_dssp CCCEEEESCCSSCCHHHHHHHTCSSCC-CCEEEEG------GGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCEEEEeCCCCccChHHHHHHHHhcCc-eeeeeec------cCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 478999999999999999999999992 3333322 369999999999999999999999999999999999976
Q ss_pred CCC
Q 014086 355 QAD 357 (431)
Q Consensus 355 ~~~ 357 (431)
...
T Consensus 78 ~~~ 80 (88)
T d1wg1a_ 78 DAL 80 (88)
T ss_dssp CCC
T ss_pred CCC
Confidence 544
No 125
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.9e-18 Score=125.94 Aligned_cols=80 Identities=28% Similarity=0.502 Sum_probs=71.1
Q ss_pred ccEEEEecCCCCCCHHHHH----HHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 014086 275 VKAVYVKNLPRNVTQDQLK----KLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECS 350 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~----~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~ 350 (431)
+++|||+|||..+|+++|+ .+|++||.|.+|++.+. +.++|||||+|.+.++|.+|+..|||..|.|+.|+|.
T Consensus 3 ~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~---~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~ 79 (91)
T d1nu4a_ 3 NHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRS---LKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQ 79 (91)
T ss_dssp CSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHH---HHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeee---ccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 4799999999999999886 46899999999998653 3457999999999999999999999999999999999
Q ss_pred eccCCCC
Q 014086 351 LAKPQAD 357 (431)
Q Consensus 351 ~a~~~~~ 357 (431)
||+++..
T Consensus 80 ~ak~~~~ 86 (91)
T d1nu4a_ 80 YAKTDSD 86 (91)
T ss_dssp ECSSCCT
T ss_pred EeCCCch
Confidence 9987643
No 126
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=3.5e-18 Score=119.22 Aligned_cols=74 Identities=23% Similarity=0.411 Sum_probs=66.7
Q ss_pred EEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccccccc
Q 014086 104 VYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQAKYR 183 (431)
Q Consensus 104 l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~~~~ 183 (431)
|||+|||+++|+++|+++|++|| +..+.+ ++++|||||+|.+.++|.+|++.||+..+.|++|+|+++..+..
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~~ 73 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDAL 73 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTTC
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCCc
Confidence 79999999999999999999999 555554 45699999999999999999999999999999999999987654
Q ss_pred c
Q 014086 184 L 184 (431)
Q Consensus 184 l 184 (431)
|
T Consensus 74 l 74 (75)
T d1wi6a1 74 L 74 (75)
T ss_dssp C
T ss_pred c
Confidence 4
No 127
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=9.6e-19 Score=124.02 Aligned_cols=75 Identities=25% Similarity=0.449 Sum_probs=68.4
Q ss_pred CEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCC-ccCCeEeeeccccc
Q 014086 102 SEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNT-EFKGKKIRCSTSQA 180 (431)
Q Consensus 102 ~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~-~~~g~~i~v~~~~~ 180 (431)
++|||+|||+++|+++|+++|++||.|.++++.. ++|||||+|.+.++|.+|++.|||. .+.|++|+|.++.+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~------~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLL------KSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEE------ETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEec------ccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCC
Confidence 4699999999999999999999999998877765 4899999999999999999999996 59999999999886
Q ss_pred cc
Q 014086 181 KY 182 (431)
Q Consensus 181 ~~ 182 (431)
+.
T Consensus 76 k~ 77 (80)
T d2cqha1 76 KK 77 (80)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 128
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.4e-18 Score=126.59 Aligned_cols=80 Identities=20% Similarity=0.428 Sum_probs=72.3
Q ss_pred CCCEEEEcCCCCCCCHHHHHH----HhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeee
Q 014086 100 HGSEVYIGGIPHDASEHDLRD----FCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRC 175 (431)
Q Consensus 100 ~~~~l~V~nLp~~~t~~~l~~----~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v 175 (431)
++++|||+|||+++|+++|++ +|++||+|.+|++.. +++++|||||+|.+.++|.+|++.+|+..+.|+.|+|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v 78 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRI 78 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 468999999999999999864 689999999998865 3778999999999999999999999999999999999
Q ss_pred ccccccc
Q 014086 176 STSQAKY 182 (431)
Q Consensus 176 ~~~~~~~ 182 (431)
.++.++.
T Consensus 79 ~~ak~~~ 85 (91)
T d1nu4a_ 79 QYAKTDS 85 (91)
T ss_dssp EECSSCC
T ss_pred EEeCCCc
Confidence 9987653
No 129
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1e-18 Score=130.74 Aligned_cols=82 Identities=18% Similarity=0.221 Sum_probs=73.6
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
.....+|||+|||+++|+++|+++|+.||.|..+.++....+|+++|||||+|.+.++|.+||+ +++..|.||.|.|.+
T Consensus 5 ~~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~ 83 (103)
T d2cpya1 5 NSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHV 83 (103)
T ss_dssp CSCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEE
T ss_pred CCCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEE
Confidence 3456789999999999999999999999999876666666789999999999999999999995 999999999999987
Q ss_pred ccc
Q 014086 178 SQA 180 (431)
Q Consensus 178 ~~~ 180 (431)
+..
T Consensus 84 ~~~ 86 (103)
T d2cpya1 84 VTL 86 (103)
T ss_dssp ECH
T ss_pred CCH
Confidence 653
No 130
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.74 E-value=1.1e-18 Score=128.64 Aligned_cols=80 Identities=16% Similarity=0.306 Sum_probs=72.3
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
..+.++|||+|||+++|+++|+++|++||.|..++. +++++|||||+|.+.++|.+|++.||+..|.|+.|+|.+
T Consensus 13 ~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~-----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~ 87 (96)
T d1fjca_ 13 VRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQ-----DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYY 87 (96)
T ss_dssp TTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEE-----TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeee-----cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 345789999999999999999999999998876642 478999999999999999999999999999999999999
Q ss_pred ccccc
Q 014086 178 SQAKY 182 (431)
Q Consensus 178 ~~~~~ 182 (431)
+.++.
T Consensus 88 a~~k~ 92 (96)
T d1fjca_ 88 TGEKG 92 (96)
T ss_dssp CSSSC
T ss_pred eCCCC
Confidence 88654
No 131
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.74 E-value=6.4e-18 Score=124.61 Aligned_cols=76 Identities=18% Similarity=0.350 Sum_probs=70.3
Q ss_pred cccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCC--cEEEEEe
Q 014086 274 QVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDG--QALECSL 351 (431)
Q Consensus 274 ~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g--~~l~v~~ 351 (431)
++++|||+|||+++|+++|+++|++||.|..|++.++ ++||||+|.+.++|.+|++.||+..|.| ++|+|.|
T Consensus 16 Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ 89 (97)
T d1whya_ 16 PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDF 89 (97)
T ss_dssp CCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEE
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEe
Confidence 4589999999999999999999999999999999876 5899999999999999999999999986 5899999
Q ss_pred ccCC
Q 014086 352 AKPQ 355 (431)
Q Consensus 352 a~~~ 355 (431)
|++.
T Consensus 90 ak~~ 93 (97)
T d1whya_ 90 AKSG 93 (97)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9854
No 132
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=5.7e-18 Score=122.11 Aligned_cols=76 Identities=24% Similarity=0.305 Sum_probs=70.1
Q ss_pred CCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccc
Q 014086 100 HGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQ 179 (431)
Q Consensus 100 ~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~ 179 (431)
..++|||+|||+++|+++|+++|++||.|..+.+.+ ++|||||+|.+.++|.+|+..||+..|.|+.|+|.++.
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~------~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~ak 80 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKK------IRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 80 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEE------CSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEcc------ccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEecc
Confidence 357999999999999999999999999998887744 58999999999999999999999999999999999987
Q ss_pred cc
Q 014086 180 AK 181 (431)
Q Consensus 180 ~~ 181 (431)
+.
T Consensus 81 P~ 82 (86)
T d2cpda1 81 PV 82 (86)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 133
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.9e-18 Score=124.80 Aligned_cols=79 Identities=24% Similarity=0.371 Sum_probs=68.9
Q ss_pred CCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccc
Q 014086 100 HGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQ 179 (431)
Q Consensus 100 ~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~ 179 (431)
.+++|||+|||+++|+++|+++|++|| +..+.+ ++++|||||+|.+.++|.+|++.||+..|.|++|+|.++.
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~ 76 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQP 76 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 468999999999999999999999999 333443 4469999999999999999999999999999999999997
Q ss_pred cccccc
Q 014086 180 AKYRLF 185 (431)
Q Consensus 180 ~~~~l~ 185 (431)
.+..+.
T Consensus 77 ~~~~~~ 82 (88)
T d1wg1a_ 77 TDALLC 82 (88)
T ss_dssp CCCCCS
T ss_pred CCCCCC
Confidence 665443
No 134
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=2.6e-18 Score=126.64 Aligned_cols=82 Identities=26% Similarity=0.441 Sum_probs=73.3
Q ss_pred CCEEEEcCCCCCCCHHHHHHHhhccCC-eEEEEEeeCC-CCCCCcceEEEEecCHHHHHHHHHHhCCC--ccCCeEeeec
Q 014086 101 GSEVYIGGIPHDASEHDLRDFCQSIGE-VTEVRIMKGK-DSSENKGFAFVTFRNVELASKAIDKLNNT--EFKGKKIRCS 176 (431)
Q Consensus 101 ~~~l~V~nLp~~~t~~~l~~~f~~~G~-v~~v~i~~~~-~~g~~~g~afV~f~~~e~a~~al~~l~~~--~~~g~~i~v~ 176 (431)
+++|||+|||.++|+++|+++|++||+ |..|+++++. .+|+++|||||+|.+.++|.+|++.|++. .+.|+.|+|.
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 368999999999999999999999996 9999999885 46899999999999999999999988654 4679999999
Q ss_pred cccccc
Q 014086 177 TSQAKY 182 (431)
Q Consensus 177 ~~~~~~ 182 (431)
++.++.
T Consensus 81 ~A~p~~ 86 (96)
T d2disa1 81 WAEPEI 86 (96)
T ss_dssp ESCSSC
T ss_pred EcCCCC
Confidence 998653
No 135
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=2.7e-17 Score=122.88 Aligned_cols=81 Identities=22% Similarity=0.258 Sum_probs=72.3
Q ss_pred CcccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhc--CCCccCCcEEEEE
Q 014086 273 SQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNT--EKYELDGQALECS 350 (431)
Q Consensus 273 ~~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l--~~~~~~g~~l~v~ 350 (431)
.++++|||+|||..+|+++|+++|++||.|.+|++.+. ||+|||+|.+.++|.+|+..+ ++..+.|++|+|.
T Consensus 13 ~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~ 86 (104)
T d1wexa_ 13 SVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFN 86 (104)
T ss_dssp CCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEE
Confidence 45689999999999999999999999999999999875 599999999999999999977 5677899999999
Q ss_pred eccCCCCCC
Q 014086 351 LAKPQADQK 359 (431)
Q Consensus 351 ~a~~~~~~~ 359 (431)
|++.+....
T Consensus 87 ~s~~~~~~~ 95 (104)
T d1wexa_ 87 YSTSKRITR 95 (104)
T ss_dssp ECSSSSCCC
T ss_pred EcCCCccCC
Confidence 998655443
No 136
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=1e-17 Score=116.87 Aligned_cols=72 Identities=19% Similarity=0.324 Sum_probs=65.3
Q ss_pred EEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccCCC
Q 014086 278 VYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKPQA 356 (431)
Q Consensus 278 l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~~~ 356 (431)
|||+|||+++++++|+++|++|| +..+.+.+ ++|||||+|.+.++|.+|+..|||..+.|++|+|+|++...
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~~~------~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFVDK------YKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDA 72 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEEET------TTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTT
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceeecc------cceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCC
Confidence 79999999999999999999999 56666544 36999999999999999999999999999999999997654
No 137
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.7e-18 Score=128.68 Aligned_cols=81 Identities=22% Similarity=0.273 Sum_probs=72.8
Q ss_pred CcccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCcc--CCcEEEEE
Q 014086 273 SQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYEL--DGQALECS 350 (431)
Q Consensus 273 ~~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~--~g~~l~v~ 350 (431)
.+..+|||+|||+.+|+++|+++|++||.|..|.|..++ ++|||||+|.+.++|.+|+..|||..| .+++|+|.
T Consensus 5 s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~ 80 (108)
T d2adba1 5 SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRID 80 (108)
T ss_dssp CCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEE
T ss_pred CCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEE
Confidence 445799999999999999999999999999999998764 369999999999999999999999988 57899999
Q ss_pred eccCCCC
Q 014086 351 LAKPQAD 357 (431)
Q Consensus 351 ~a~~~~~ 357 (431)
|+++...
T Consensus 81 ~s~~~~~ 87 (108)
T d2adba1 81 FSKLTSL 87 (108)
T ss_dssp ECSSCSC
T ss_pred ecCCccc
Confidence 9987554
No 138
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=6.1e-18 Score=128.16 Aligned_cols=76 Identities=25% Similarity=0.341 Sum_probs=70.3
Q ss_pred CCEEEEcCCCC-CCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccc
Q 014086 101 GSEVYIGGIPH-DASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQ 179 (431)
Q Consensus 101 ~~~l~V~nLp~-~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~ 179 (431)
+++|||+|||+ .+|+++|+++|+.||.|..|+|++++ +|||||+|.+.++|.+|++.|++..|.|+.|+|.++.
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~ 76 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSK 76 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCS
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 58999999965 59999999999999999999998873 7999999999999999999999999999999999986
Q ss_pred cc
Q 014086 180 AK 181 (431)
Q Consensus 180 ~~ 181 (431)
..
T Consensus 77 ~~ 78 (109)
T d2adca1 77 HQ 78 (109)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 139
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=2.4e-18 Score=128.21 Aligned_cols=81 Identities=22% Similarity=0.305 Sum_probs=72.1
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
+....+|||+|||+++|+++|+++|+.||. ..|.++.+. ++.++|||||+|.+.++|.+||+ +|+..|.||.|+|.+
T Consensus 12 ~~~~~~v~v~nLp~~~te~dl~~~F~~~~~-~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~ 88 (102)
T d1weza_ 12 STTGHCVHMRGLPYRATENDIYNFFSPLNP-MRVHIEIGP-DGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFL 88 (102)
T ss_dssp CSSSCEEEEESCCTTCCHHHHHHSSCSCCC-SEEEEEESS-SSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEE
T ss_pred CCCCCEEEEeCCCCcCCHHHHHHHHhccCc-ceeeeEEec-CCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 456789999999999999999999999984 578888775 48999999999999999999995 899999999999988
Q ss_pred cccc
Q 014086 178 SQAK 181 (431)
Q Consensus 178 ~~~~ 181 (431)
+...
T Consensus 89 s~~~ 92 (102)
T d1weza_ 89 NSTA 92 (102)
T ss_dssp ECCC
T ss_pred cCCC
Confidence 7654
No 140
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=1.4e-17 Score=120.52 Aligned_cols=79 Identities=15% Similarity=0.283 Sum_probs=71.4
Q ss_pred CCcccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhc--CCCccCCcEEEE
Q 014086 272 ASQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNT--EKYELDGQALEC 349 (431)
Q Consensus 272 ~~~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l--~~~~~~g~~l~v 349 (431)
..++++|||+|||..+|+++|+++|++||.|..|++.++ +|||||+|.+.++|.+|+..+ ++..+.|++|+|
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v 78 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYI 78 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEE
Confidence 345689999999999999999999999999999999876 489999999999999999865 578899999999
Q ss_pred EeccCCC
Q 014086 350 SLAKPQA 356 (431)
Q Consensus 350 ~~a~~~~ 356 (431)
.|++.+.
T Consensus 79 ~~sk~~~ 85 (88)
T d2cq1a1 79 QYSNHKE 85 (88)
T ss_dssp EECSCSS
T ss_pred EECCCCC
Confidence 9998654
No 141
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72 E-value=1.2e-17 Score=123.10 Aligned_cols=78 Identities=18% Similarity=0.432 Sum_probs=71.0
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCC--eEeee
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKG--KKIRC 175 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g--~~i~v 175 (431)
.+++++|||+|||+++|+++|+++|++||.|..|++.++ ++||||+|.+.++|.+|++.||+..|.| ++|+|
T Consensus 14 ~~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v 87 (97)
T d1whya_ 14 ANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRV 87 (97)
T ss_dssp CCCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEE
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEE
Confidence 345799999999999999999999999999999999764 7899999999999999999999999986 58999
Q ss_pred cccccc
Q 014086 176 STSQAK 181 (431)
Q Consensus 176 ~~~~~~ 181 (431)
.++++.
T Consensus 88 ~~ak~~ 93 (97)
T d1whya_ 88 DFAKSG 93 (97)
T ss_dssp EECCCC
T ss_pred EeCCCC
Confidence 988754
No 142
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=3.4e-18 Score=123.38 Aligned_cols=71 Identities=27% Similarity=0.434 Sum_probs=66.4
Q ss_pred EEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccccc
Q 014086 103 EVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQA 180 (431)
Q Consensus 103 ~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~~ 180 (431)
+|||+|||+++|+++|+++|++||.|.+|+++. .|||||+|.+.++|.+||+.||+..|.|+.|+|.++..
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~ 72 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYR-------DGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRV 72 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEECT-------TSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhcccccccccc-------cceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEec
Confidence 699999999999999999999999999999864 48999999999999999999999999999999987654
No 143
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=4.3e-18 Score=127.34 Aligned_cols=82 Identities=13% Similarity=0.139 Sum_probs=71.1
Q ss_pred ccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 275 VKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 275 ~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
..+|||+|||+++|+++|+++|+.||.|..+.++....++.++|||||+|.+.++|.+||. ||+..|+||.|.|.++..
T Consensus 8 ~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~~ 86 (103)
T d2cpya1 8 KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVTL 86 (103)
T ss_dssp CCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEECH
T ss_pred ceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECCH
Confidence 3689999999999999999999999998875444554566669999999999999999996 899999999999999865
Q ss_pred CCC
Q 014086 355 QAD 357 (431)
Q Consensus 355 ~~~ 357 (431)
...
T Consensus 87 ~~~ 89 (103)
T d2cpya1 87 EDM 89 (103)
T ss_dssp HHH
T ss_pred HHh
Confidence 433
No 144
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=2.1e-17 Score=119.61 Aligned_cols=78 Identities=21% Similarity=0.315 Sum_probs=70.8
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHh--CCCccCCeEeee
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKL--NNTEFKGKKIRC 175 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l--~~~~~~g~~i~v 175 (431)
.+++++|||+|||+++|+++|+++|++||.|.++++.++ ++||||+|.+.++|.+|++.+ ++..+.|++|+|
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v 78 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYI 78 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEE
Confidence 567899999999999999999999999999999998764 789999999999999999865 577899999999
Q ss_pred cccccc
Q 014086 176 STSQAK 181 (431)
Q Consensus 176 ~~~~~~ 181 (431)
.++..+
T Consensus 79 ~~sk~~ 84 (88)
T d2cq1a1 79 QYSNHK 84 (88)
T ss_dssp EECSCS
T ss_pred EECCCC
Confidence 998754
No 145
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=3.6e-18 Score=123.49 Aligned_cols=77 Identities=31% Similarity=0.498 Sum_probs=69.2
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
..+++|||+|||+++|+++|+++|++||.|.+|++.. .+++||||+|.+.++|.+|+. ++..|.|++|+|.++
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~-----~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a 75 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPK-----PFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNA 75 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCS-----SCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEee-----ccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeC
Confidence 3578999999999999999999999999999998753 468999999999999999994 788899999999998
Q ss_pred cccc
Q 014086 179 QAKY 182 (431)
Q Consensus 179 ~~~~ 182 (431)
.++.
T Consensus 76 ~~k~ 79 (88)
T d1wf0a_ 76 EPKH 79 (88)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7653
No 146
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=7.4e-18 Score=124.13 Aligned_cols=74 Identities=22% Similarity=0.379 Sum_probs=67.9
Q ss_pred CCCEEEEcCCC-CCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 100 HGSEVYIGGIP-HDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 100 ~~~~l~V~nLp-~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
..++|||+||| ..+++++|+++|++||.|.+|+| ++|||||+|.+.++|.+|++.||+..|.|++|+|.++
T Consensus 14 ~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a 85 (98)
T d1wf2a_ 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLA 85 (98)
T ss_dssp CCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEET
T ss_pred CCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 45789999997 57889999999999999999998 3799999999999999999999999999999999998
Q ss_pred ccc
Q 014086 179 QAK 181 (431)
Q Consensus 179 ~~~ 181 (431)
...
T Consensus 86 ~~~ 88 (98)
T d1wf2a_ 86 AEP 88 (98)
T ss_dssp TSC
T ss_pred CCC
Confidence 754
No 147
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=1.1e-17 Score=123.17 Aligned_cols=74 Identities=26% Similarity=0.412 Sum_probs=68.6
Q ss_pred CCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccc
Q 014086 100 HGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQ 179 (431)
Q Consensus 100 ~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~ 179 (431)
..++|||+|||+++++++|+++|++||.|..|.|.+ +|||||+|.+.++|.+||+.||+..|.|+.|+|.+..
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~ 86 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIR 86 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEe
Confidence 467899999999999999999999999999999863 6899999999999999999999999999999998765
Q ss_pred c
Q 014086 180 A 180 (431)
Q Consensus 180 ~ 180 (431)
.
T Consensus 87 ~ 87 (98)
T d1wg4a_ 87 V 87 (98)
T ss_dssp E
T ss_pred c
Confidence 4
No 148
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=3.1e-18 Score=129.86 Aligned_cols=82 Identities=21% Similarity=0.293 Sum_probs=74.1
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
.....+|||+|||+++|+++|+++|+.||.|..+.++.+..+|+++|||||+|.+.++|.+|| .+|+..|+||.|.|..
T Consensus 15 ~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al-~~~~~~i~gR~i~V~~ 93 (112)
T d1wela1 15 HEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAAL-CRHKQYMGNRFIQVHP 93 (112)
T ss_dssp CCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHH-TSCSBCSTTSCBEEEE
T ss_pred CCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHH-HcCCCcCCCEEEEEEE
Confidence 345779999999999999999999999999988777777778999999999999999999999 4999999999999987
Q ss_pred ccc
Q 014086 178 SQA 180 (431)
Q Consensus 178 ~~~ 180 (431)
+..
T Consensus 94 ~~~ 96 (112)
T d1wela1 94 ITK 96 (112)
T ss_dssp ECH
T ss_pred cCh
Confidence 654
No 149
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.70 E-value=1.1e-17 Score=123.65 Aligned_cols=81 Identities=20% Similarity=0.339 Sum_probs=72.4
Q ss_pred CCCCCEEEEcCCCCC-CCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHH--HhCCCccCCeEee
Q 014086 98 PPHGSEVYIGGIPHD-ASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAID--KLNNTEFKGKKIR 174 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~-~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~--~l~~~~~~g~~i~ 174 (431)
+..+++|||+|||.+ +|+++|+++|+.||.|.+|.++++ +|+|||+|.+.++|.+|++ .+++..|.|+.|+
T Consensus 15 ~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~ 88 (99)
T d1x4fa1 15 QELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVK 88 (99)
T ss_dssp SCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCE
T ss_pred CCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEEE
Confidence 456789999999986 899999999999999999999764 7899999999999999997 4788899999999
Q ss_pred eccccccccc
Q 014086 175 CSTSQAKYRL 184 (431)
Q Consensus 175 v~~~~~~~~l 184 (431)
|.++..+..|
T Consensus 89 V~~s~~~~~l 98 (99)
T d1x4fa1 89 VDLSEKYKKL 98 (99)
T ss_dssp EEEECSCSSS
T ss_pred EEEcCCcccC
Confidence 9999876554
No 150
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.6e-17 Score=125.15 Aligned_cols=80 Identities=13% Similarity=0.106 Sum_probs=71.8
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCcc--CCeEeee
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEF--KGKKIRC 175 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~--~g~~i~v 175 (431)
+....+|||+|||+++|+++|+++|++||.|..|.|+.++ ++|||||+|.+.++|.+|+..||+..| .|++|+|
T Consensus 4 ~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v 79 (108)
T d2adba1 4 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRI 79 (108)
T ss_dssp CCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEE
T ss_pred CCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEE
Confidence 4456789999999999999999999999999999998764 589999999999999999999999988 5788999
Q ss_pred cccccc
Q 014086 176 STSQAK 181 (431)
Q Consensus 176 ~~~~~~ 181 (431)
.++..+
T Consensus 80 ~~s~~~ 85 (108)
T d2adba1 80 DFSKLT 85 (108)
T ss_dssp EECSSC
T ss_pred EecCCc
Confidence 887654
No 151
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=2.7e-17 Score=121.44 Aligned_cols=78 Identities=18% Similarity=0.322 Sum_probs=70.2
Q ss_pred CcccEEEEecCCCC-CCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHH--hcCCCccCCcEEEE
Q 014086 273 SQVKAVYVKNLPRN-VTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALK--NTEKYELDGQALEC 349 (431)
Q Consensus 273 ~~~~~l~V~nLp~~-~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~--~l~~~~~~g~~l~v 349 (431)
..+++|||+|||.. +|+++|+++|++||.|.+|+++++ +|||||+|.+.++|.+|+. .+++..|.|++|+|
T Consensus 16 ~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V 89 (99)
T d1x4fa1 16 ELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKV 89 (99)
T ss_dssp CCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEE
T ss_pred CCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEEEE
Confidence 44579999999985 899999999999999999999876 4899999999999999997 47888999999999
Q ss_pred EeccCCC
Q 014086 350 SLAKPQA 356 (431)
Q Consensus 350 ~~a~~~~ 356 (431)
.||+...
T Consensus 90 ~~s~~~~ 96 (99)
T d1x4fa1 90 DLSEKYK 96 (99)
T ss_dssp EEECSCS
T ss_pred EEcCCcc
Confidence 9997554
No 152
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=5.3e-17 Score=117.18 Aligned_cols=78 Identities=18% Similarity=0.213 Sum_probs=69.8
Q ss_pred CcccEEEEecCCCC-CCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhc--CCCccCCcEEEE
Q 014086 273 SQVKAVYVKNLPRN-VTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNT--EKYELDGQALEC 349 (431)
Q Consensus 273 ~~~~~l~V~nLp~~-~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l--~~~~~~g~~l~v 349 (431)
..+++|||+|||.. +|+++|+++|++||.|.+|.+.++ +++|||+|.+.++|..|+..| ++..+.|++|+|
T Consensus 6 ~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~------k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V 79 (89)
T d1x4da1 6 ETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK------INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRV 79 (89)
T ss_dssp CCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS------SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc------ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEE
Confidence 34589999999986 789999999999999999999886 489999999999999999966 678899999999
Q ss_pred EeccCCC
Q 014086 350 SLAKPQA 356 (431)
Q Consensus 350 ~~a~~~~ 356 (431)
.||+...
T Consensus 80 ~~s~~~~ 86 (89)
T d1x4da1 80 HLSQKYK 86 (89)
T ss_dssp EEECCCT
T ss_pred EECCCcc
Confidence 9997543
No 153
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=1.3e-16 Score=119.10 Aligned_cols=79 Identities=22% Similarity=0.228 Sum_probs=70.9
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHh--CCCccCCeEeee
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKL--NNTEFKGKKIRC 175 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l--~~~~~~g~~i~v 175 (431)
.+++++|||+|||+++|+++|+++|++||.|..|++.++ +++|||+|.+.++|.+|+..+ ++..+.|++|+|
T Consensus 12 ~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v 85 (104)
T d1wexa_ 12 VSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFF 85 (104)
T ss_dssp CCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEE
Confidence 456899999999999999999999999999999999754 889999999999999999877 456789999999
Q ss_pred ccccccc
Q 014086 176 STSQAKY 182 (431)
Q Consensus 176 ~~~~~~~ 182 (431)
.++..++
T Consensus 86 ~~s~~~~ 92 (104)
T d1wexa_ 86 NYSTSKR 92 (104)
T ss_dssp EECSSSS
T ss_pred EEcCCCc
Confidence 9987643
No 154
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68 E-value=5.4e-17 Score=120.54 Aligned_cols=78 Identities=15% Similarity=0.107 Sum_probs=69.8
Q ss_pred ccEEEEecCCCCC-C----HHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEE
Q 014086 275 VKAVYVKNLPRNV-T----QDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALEC 349 (431)
Q Consensus 275 ~~~l~V~nLp~~~-t----~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v 349 (431)
+.+|||+||+..+ + .++|+.+|++||.|.++++++. ++||||+|.+.++|.+|+..|||..|.|++|+|
T Consensus 5 ~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v 78 (104)
T d1weya_ 5 SSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKS------FKRVRINFSNPLSAADARLRLHKTEFLGKEMKL 78 (104)
T ss_dssp CCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETT------TTEEEEECSSTTHHHHHHHTSTTSEETTEECEE
T ss_pred CceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecC------CCEEEEEECCHHHHHHHHHHhcccccCCCEeEE
Confidence 4789999999886 3 3569999999999999999865 589999999999999999999999999999999
Q ss_pred EeccCCCCC
Q 014086 350 SLAKPQADQ 358 (431)
Q Consensus 350 ~~a~~~~~~ 358 (431)
.||++....
T Consensus 79 ~~a~~~~~~ 87 (104)
T d1weya_ 79 YFAQTLHIG 87 (104)
T ss_dssp ECCCCSSCC
T ss_pred eecccCCCC
Confidence 999866553
No 155
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.67 E-value=6.7e-17 Score=116.62 Aligned_cols=80 Identities=21% Similarity=0.200 Sum_probs=71.2
Q ss_pred CCCCCEEEEcCCCCC-CCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHh--CCCccCCeEee
Q 014086 98 PPHGSEVYIGGIPHD-ASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKL--NNTEFKGKKIR 174 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~-~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l--~~~~~~g~~i~ 174 (431)
...+++|||+|||.. +|+++|.++|+.||.|.+|.++++ +++|||+|.+.++|..|++.+ ++..+.|++|+
T Consensus 5 ~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~------k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~ 78 (89)
T d1x4da1 5 VETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK------INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVR 78 (89)
T ss_dssp CCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS------SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECE
T ss_pred CCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc------ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEE
Confidence 456899999999986 889999999999999999999765 679999999999999999866 67789999999
Q ss_pred ecccccccc
Q 014086 175 CSTSQAKYR 183 (431)
Q Consensus 175 v~~~~~~~~ 183 (431)
|.++.....
T Consensus 79 V~~s~~~~~ 87 (89)
T d1x4da1 79 VHLSQKYKR 87 (89)
T ss_dssp EEEECCCTT
T ss_pred EEECCCccc
Confidence 999876543
No 156
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1e-17 Score=126.95 Aligned_cols=82 Identities=17% Similarity=0.256 Sum_probs=71.7
Q ss_pred CcccEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 273 SQVKAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 273 ~~~~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
....+|||+|||+.+|+++|+++|+.||.|..+.++.+...+.++|||||+|.+.++|.+|+. ||+..|+||.|.|.++
T Consensus 16 ~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~ 94 (112)
T d1wela1 16 EAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPI 94 (112)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEE
T ss_pred CCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEc
Confidence 345799999999999999999999999998775555555566679999999999999999995 8999999999999988
Q ss_pred cCC
Q 014086 353 KPQ 355 (431)
Q Consensus 353 ~~~ 355 (431)
.+.
T Consensus 95 ~~~ 97 (112)
T d1wela1 95 TKK 97 (112)
T ss_dssp CHH
T ss_pred ChH
Confidence 654
No 157
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=3.7e-18 Score=124.28 Aligned_cols=77 Identities=22% Similarity=0.492 Sum_probs=68.5
Q ss_pred CEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEe-----eCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeec
Q 014086 102 SEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIM-----KGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCS 176 (431)
Q Consensus 102 ~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~-----~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~ 176 (431)
++|||+|||+++|+++|+++|++||.|..+.+. .+..+++++|||||+|.+.++|.+|+ .|||..|.|+.|+|.
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~-~l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAM-AFDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGG-GGSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHH-hhCCcEECCEEEEEC
Confidence 789999999999999999999999988766553 34567889999999999999999999 599999999999997
Q ss_pred ccc
Q 014086 177 TSQ 179 (431)
Q Consensus 177 ~~~ 179 (431)
.+.
T Consensus 81 r~k 83 (90)
T d1u2fa_ 81 RPH 83 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
No 158
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=7.5e-18 Score=122.59 Aligned_cols=77 Identities=19% Similarity=0.398 Sum_probs=66.7
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecC-----CCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPP-----AKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECS 350 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~-----~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~ 350 (431)
++|||+|||+.+|+++|+++|+.||.|..+.+.. +..+..++|||||+|.+.++|.+|+. |||..|.|+.|+|.
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 6899999999999999999999999887766653 23455668999999999999999985 99999999999996
Q ss_pred ecc
Q 014086 351 LAK 353 (431)
Q Consensus 351 ~a~ 353 (431)
.++
T Consensus 81 r~k 83 (90)
T d1u2fa_ 81 RPH 83 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 433
No 159
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.1e-15 Score=127.45 Aligned_cols=83 Identities=28% Similarity=0.547 Sum_probs=77.8
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecc
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCST 177 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~ 177 (431)
....++|||+|||+.+|+++|+++|+.||.|..+.++.+..+|+++|||||+|.+.++|.+||+ +++..+.|+.|+|.+
T Consensus 94 ~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~~ 172 (183)
T d1u1qa_ 94 HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRK 172 (183)
T ss_dssp TCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEEE
T ss_pred ccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEe
Confidence 4567899999999999999999999999999999999999999999999999999999999995 788999999999998
Q ss_pred cccc
Q 014086 178 SQAK 181 (431)
Q Consensus 178 ~~~~ 181 (431)
+.++
T Consensus 173 A~~k 176 (183)
T d1u1qa_ 173 ALSK 176 (183)
T ss_dssp CCCH
T ss_pred cCCc
Confidence 8654
No 160
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.60 E-value=5.4e-16 Score=115.03 Aligned_cols=78 Identities=22% Similarity=0.198 Sum_probs=69.5
Q ss_pred CCCCEEEEcCCCCCC-CH----HHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEe
Q 014086 99 PHGSEVYIGGIPHDA-SE----HDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKI 173 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~-t~----~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i 173 (431)
..+++|||+||+.++ ++ ++|+++|+.||.|.++++++ +++||||+|.+.++|.+|++.|||..|.|+.|
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k------~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l 76 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFK------SFKRVRINFSNPLSAADARLRLHKTEFLGKEM 76 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEET------TTTEEEEECSSTTHHHHHHHTSTTSEETTEEC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEec------CCCEEEEEECCHHHHHHHHHHhcccccCCCEe
Confidence 357899999999886 33 56999999999999999975 48899999999999999999999999999999
Q ss_pred eeccccccc
Q 014086 174 RCSTSQAKY 182 (431)
Q Consensus 174 ~v~~~~~~~ 182 (431)
+|.++....
T Consensus 77 ~v~~a~~~~ 85 (104)
T d1weya_ 77 KLYFAQTLH 85 (104)
T ss_dssp EEECCCCSS
T ss_pred EEeecccCC
Confidence 999987653
No 161
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=1.3e-16 Score=118.43 Aligned_cols=76 Identities=17% Similarity=0.227 Sum_probs=70.4
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEec
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLA 352 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a 352 (431)
+.++|++++..+++++|+++|++||.|.+|+|+++. ++.++|||||+|.+.++|.+|+..|||+.|+||+|+|.|.
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~-~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNL-GDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSS-SSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCC-CCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 468889999999999999999999999999998775 5566999999999999999999999999999999999986
No 162
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2.9e-16 Score=116.55 Aligned_cols=76 Identities=29% Similarity=0.341 Sum_probs=70.2
Q ss_pred CEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 102 SEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 102 ~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
+.++|++++.++++++|+++|++||.|.+|+|+++ .+|+++|||||+|.+.++|.+|++.|||..+.||+|+|.++
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 34778888888999999999999999999999877 57999999999999999999999999999999999999865
No 163
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=9.8e-15 Score=107.59 Aligned_cols=65 Identities=20% Similarity=0.370 Sum_probs=58.8
Q ss_pred CcccEEEEec--CCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccC
Q 014086 273 SQVKAVYVKN--LPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELD 343 (431)
Q Consensus 273 ~~~~~l~V~n--Lp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~ 343 (431)
.++++|+|.| ||..+|+++|+++|++||.|..|++.++ ++||||+|.+.++|.+|+..|||..|.
T Consensus 16 ~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i~ 82 (101)
T d2cq2a1 16 YATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEVV 82 (101)
T ss_dssp SCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEEE
T ss_pred CCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCCC
Confidence 3457888865 9999999999999999999999999876 489999999999999999999998873
No 164
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=9.8e-15 Score=107.59 Aligned_cols=66 Identities=18% Similarity=0.291 Sum_probs=59.3
Q ss_pred CCCCCCEEEEcC--CCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCcc
Q 014086 97 LPPHGSEVYIGG--IPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEF 168 (431)
Q Consensus 97 ~~~~~~~l~V~n--Lp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~ 168 (431)
...++++|+|.| ||.++|+++|+++|++||.|..|+++++ ++||||+|.+.++|.+|+..|||..+
T Consensus 14 ~~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 14 VSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp CSSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 345678899955 9999999999999999999999998764 78999999999999999999999876
No 165
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.2e-14 Score=109.78 Aligned_cols=72 Identities=19% Similarity=0.308 Sum_probs=64.3
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCH-HHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAER-SSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~-~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
..+||+|||..+|+++|+++|++||.|.+|.|+++ +|||||+|.+. ++|..|+..||+..+.++.+.|.++.
T Consensus 12 ~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 12 LLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEV 84 (113)
T ss_dssp EEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEE
T ss_pred eEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEee
Confidence 56799999999999999999999999999999976 59999999995 78999999999988887777776654
No 166
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=2.2e-14 Score=105.30 Aligned_cols=81 Identities=16% Similarity=0.294 Sum_probs=69.4
Q ss_pred CcccEEEEecC--CCCC---------CHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCc
Q 014086 273 SQVKAVYVKNL--PRNV---------TQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYE 341 (431)
Q Consensus 273 ~~~~~l~V~nL--p~~~---------t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~ 341 (431)
..+++|+|+|| |..+ ..++|+..|++||.|..|.+..+. ++|||||+|.+.++|.+|+..|||+.
T Consensus 6 ~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~----~~G~~fV~f~~~e~A~~A~~~lng~~ 81 (99)
T d2dita1 6 RHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRH----PDGVASVSFRDPEEADYCIQTLDGRW 81 (99)
T ss_dssp CSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTC----TTCEEEEECSCHHHHHHHHHHSTTCE
T ss_pred CCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCC----CccEEEEEECCHHHHHHHHHHhCCcE
Confidence 34589999999 5432 236899999999999999987764 46999999999999999999999999
Q ss_pred cCCcEEEEEeccCCCC
Q 014086 342 LDGQALECSLAKPQAD 357 (431)
Q Consensus 342 ~~g~~l~v~~a~~~~~ 357 (431)
|+||+|+|.|+.+...
T Consensus 82 ~~gr~i~v~~~~g~~~ 97 (99)
T d2dita1 82 FGGRQITAQAWDGTTD 97 (99)
T ss_dssp ETTEECEEEECCSCCC
T ss_pred ECCEEEEEEEeCCcCC
Confidence 9999999999976543
No 167
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.51 E-value=8.9e-15 Score=102.60 Aligned_cols=75 Identities=13% Similarity=0.160 Sum_probs=63.9
Q ss_pred CCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeE-eeeccc
Q 014086 100 HGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKK-IRCSTS 178 (431)
Q Consensus 100 ~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~-i~v~~~ 178 (431)
+.+.|+|.+||++++++ |..+|++||.|.++++. ++++||||+|.+.++|.+|| .+||..|.|+. |.|.++
T Consensus 3 ~~~wV~V~G~p~~~~~~-il~~F~~~G~I~~~~~~------~~~~~~fV~f~~~~~A~~Al-~~nG~~~~g~~~vgV~~~ 74 (81)
T d1wwha1 3 DDTWVTVFGFPQASASY-ILLQFAQYGNILKHVMS------NTGNWMHIRYQSKLQARKAL-SKDGRIFGESIMIGVKPC 74 (81)
T ss_dssp GGGEEEEECCCGGGHHH-HHHHHHTTSCEEEEEEC------SSSSEEEEEESSHHHHHHHH-TTTTCEETTTEECEEEEC
T ss_pred cccEEEEECCChHHHHH-HHHHHHhhhhhheEEec------CCCCEEEEEEcccHHHHHHH-hcCCCeECCcEEEEEEeC
Confidence 35789999999999865 44689999999999874 45899999999999999999 49999999985 568887
Q ss_pred cccc
Q 014086 179 QAKY 182 (431)
Q Consensus 179 ~~~~ 182 (431)
..+.
T Consensus 75 ~~k~ 78 (81)
T d1wwha1 75 IDKN 78 (81)
T ss_dssp CCHH
T ss_pred CChh
Confidence 6543
No 168
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.6e-14 Score=109.04 Aligned_cols=76 Identities=13% Similarity=0.174 Sum_probs=65.2
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCH-HHHHHHHHHhCCCccCCeEeeec
Q 014086 98 PPHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNV-ELASKAIDKLNNTEFKGKKIRCS 176 (431)
Q Consensus 98 ~~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~-e~a~~al~~l~~~~~~g~~i~v~ 176 (431)
+.--..+||+|||+++|+++|+++|++||+|.+|.|+++ +|||||.|.+. ++|..|+..+++..+.++.+.|.
T Consensus 8 ~~g~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~ 81 (113)
T d1owxa_ 8 KIGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVT 81 (113)
T ss_dssp CCCCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEE
T ss_pred CCCCeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEE
Confidence 333345599999999999999999999999999999864 89999999995 78999999999999888877776
Q ss_pred ccc
Q 014086 177 TSQ 179 (431)
Q Consensus 177 ~~~ 179 (431)
+..
T Consensus 82 ~~~ 84 (113)
T d1owxa_ 82 WEV 84 (113)
T ss_dssp EEE
T ss_pred Eee
Confidence 543
No 169
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=2.7e-14 Score=104.81 Aligned_cols=81 Identities=27% Similarity=0.419 Sum_probs=70.4
Q ss_pred CCCCCCEEEEcCC--CCCC---------CHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCC
Q 014086 97 LPPHGSEVYIGGI--PHDA---------SEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNN 165 (431)
Q Consensus 97 ~~~~~~~l~V~nL--p~~~---------t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~ 165 (431)
...++++|+|+|| |.++ .+++|++.|++||.|..|.+..+ .++|+|||+|.+.++|.+|+..|||
T Consensus 4 ~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng 79 (99)
T d2dita1 4 RMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDG 79 (99)
T ss_dssp CCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTT
T ss_pred CCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCC
Confidence 4568999999999 6543 23689999999999999998764 4589999999999999999999999
Q ss_pred CccCCeEeeecccccc
Q 014086 166 TEFKGKKIRCSTSQAK 181 (431)
Q Consensus 166 ~~~~g~~i~v~~~~~~ 181 (431)
..|.||+|+|.+..++
T Consensus 80 ~~~~gr~i~v~~~~g~ 95 (99)
T d2dita1 80 RWFGGRQITAQAWDGT 95 (99)
T ss_dssp CEETTEECEEEECCSC
T ss_pred cEECCEEEEEEEeCCc
Confidence 9999999999987654
No 170
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=2.7e-14 Score=106.05 Aligned_cols=82 Identities=13% Similarity=0.270 Sum_probs=70.2
Q ss_pred cccEEEEecC--CCCC--------CHHHHHHHHhccccEEEEEecCCCCCC--CcCCEEEEEeCCHHHHHHHHHhcCCCc
Q 014086 274 QVKAVYVKNL--PRNV--------TQDQLKKLFEHHGRITKVVVPPAKPGQ--EKNRIGFVHFAERSSAMKALKNTEKYE 341 (431)
Q Consensus 274 ~~~~l~V~nL--p~~~--------t~~~L~~~F~~~G~v~~v~i~~~~~~~--~~rg~afV~F~~~~~A~~Al~~l~~~~ 341 (431)
++++|.|+|| |..+ ..++|++.|++||.|.+|.|+++..+. ..+|++||+|.+.++|.+|+..|||+.
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 4589999999 4433 346899999999999999998876553 346899999999999999999999999
Q ss_pred cCCcEEEEEeccCC
Q 014086 342 LDGQALECSLAKPQ 355 (431)
Q Consensus 342 ~~g~~l~v~~a~~~ 355 (431)
|+||.|.|.|+.+.
T Consensus 83 f~gR~v~v~f~~~~ 96 (104)
T d1o0pa_ 83 FANRVVVTKYCDPD 96 (104)
T ss_dssp SSSSCCEEEEECHH
T ss_pred ECCeEEEEEEcCHH
Confidence 99999999998753
No 171
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=8.8e-14 Score=97.41 Aligned_cols=72 Identities=18% Similarity=0.182 Sum_probs=62.7
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcE-EEEEeccC
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQA-LECSLAKP 354 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~-l~v~~a~~ 354 (431)
+.|+|.|+|++++++.| ++|++||.|.++++.++ +|||||+|.+.++|.+||. +||..|+|+. |.|..+..
T Consensus 5 ~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~~~------~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~~ 76 (81)
T d1wwha1 5 TWVTVFGFPQASASYIL-LQFAQYGNILKHVMSNT------GNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCID 76 (81)
T ss_dssp GEEEEECCCGGGHHHHH-HHHHTTSCEEEEEECSS------SSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECCC
T ss_pred cEEEEECCChHHHHHHH-HHHHhhhhhheEEecCC------CCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCCC
Confidence 68999999999987655 57999999999998755 5999999999999999995 8999999985 57888765
Q ss_pred C
Q 014086 355 Q 355 (431)
Q Consensus 355 ~ 355 (431)
+
T Consensus 77 k 77 (81)
T d1wwha1 77 K 77 (81)
T ss_dssp H
T ss_pred h
Confidence 4
No 172
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=1.8e-13 Score=101.54 Aligned_cols=82 Identities=22% Similarity=0.325 Sum_probs=70.1
Q ss_pred CCCCEEEEcCC--CCCC--------CHHHHHHHhhccCCeEEEEEeeCCCC--CCCcceEEEEecCHHHHHHHHHHhCCC
Q 014086 99 PHGSEVYIGGI--PHDA--------SEHDLRDFCQSIGEVTEVRIMKGKDS--SENKGFAFVTFRNVELASKAIDKLNNT 166 (431)
Q Consensus 99 ~~~~~l~V~nL--p~~~--------t~~~l~~~f~~~G~v~~v~i~~~~~~--g~~~g~afV~f~~~e~a~~al~~l~~~ 166 (431)
+++++|.|+|| |.++ ..++|++.|++||.|.+|.|.++..+ ....|++||+|.+.++|.+|+..|||.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 35889999999 5543 34579999999999999999887654 345689999999999999999999999
Q ss_pred ccCCeEeeeccccc
Q 014086 167 EFKGKKIRCSTSQA 180 (431)
Q Consensus 167 ~~~g~~i~v~~~~~ 180 (431)
.+.||.|.|.+...
T Consensus 82 ~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 82 KFANRVVVTKYCDP 95 (104)
T ss_dssp CSSSSCCEEEEECH
T ss_pred EECCeEEEEEEcCH
Confidence 99999999998763
No 173
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.32 E-value=2.1e-06 Score=55.05 Aligned_cols=61 Identities=23% Similarity=0.408 Sum_probs=56.0
Q ss_pred HHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEecc
Q 014086 290 DQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAK 353 (431)
Q Consensus 290 ~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~ 353 (431)
+.|.+.|.+++.|.++.|....++.. .|-|...+..+|..|+..||.+.|++++|.|+++.
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~dg~~---~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTDYQL---KAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCSTTC---CEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHhheeEEEEEEEeccCCcE---EEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 45678899999999999999887765 79999999999999999999999999999999986
No 174
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.86 E-value=9.5e-06 Score=54.85 Aligned_cols=56 Identities=23% Similarity=0.328 Sum_probs=49.8
Q ss_pred HHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEeccC
Q 014086 290 DQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEKYELDGQALECSLAKP 354 (431)
Q Consensus 290 ~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~~~~~g~~l~v~~a~~ 354 (431)
.+|.+.|..||+|.-||++.+ ..+|+|.+-+.|.+|+. +++..+.|+.|+|....+
T Consensus 39 ~~Llq~l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~~~~ 94 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQG--------QMLVTFADSHSALSVLD-VDGMKVKGRAVKISGPSS 94 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEETT--------EEEEECSCSHHHHHHHH-GGGSEETTEEEEEECCCC
T ss_pred HHHHHHHhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHhc-cCCeEEcceEEEEecCCC
Confidence 467888999999999999876 48999999999999997 899999999999987543
No 175
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.80 E-value=2.2e-05 Score=53.09 Aligned_cols=54 Identities=26% Similarity=0.402 Sum_probs=48.4
Q ss_pred HHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeeccc
Q 014086 116 HDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTS 178 (431)
Q Consensus 116 ~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~ 178 (431)
.+|.+.|..||+|.-|+++.+ ..+|+|.+-..|.+|+ .+++..+.|+.|.|...
T Consensus 39 ~~Llq~l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al-~l~g~~v~G~~l~It~~ 92 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQG--------QMLVTFADSHSALSVL-DVDGMKVKGRAVKISGP 92 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEETT--------EEEEECSCSHHHHHHH-HGGGSEETTEEEEEECC
T ss_pred HHHHHHHhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHh-ccCCeEEcceEEEEecC
Confidence 467888999999999999865 5999999999999999 59999999999999754
No 176
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.76 E-value=9.7e-05 Score=50.91 Aligned_cols=78 Identities=12% Similarity=0.152 Sum_probs=62.2
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCc--CCEEEEEeCCHHHHHHHHHhcCCCccCC-----cEEE
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEK--NRIGFVHFAERSSAMKALKNTEKYELDG-----QALE 348 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~--rg~afV~F~~~~~A~~Al~~l~~~~~~g-----~~l~ 348 (431)
++|.|+.||+.+|++++.+.++..|.+........+.+... -.-|||.|.+.++...-.+.++|+.|-+ .+-.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~ 81 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAI 81 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeE
Confidence 58999999999999999999999999888877665533221 1359999999999999999999988743 2446
Q ss_pred EEecc
Q 014086 349 CSLAK 353 (431)
Q Consensus 349 v~~a~ 353 (431)
|++|.
T Consensus 82 VE~AP 86 (91)
T d1uw4a_ 82 VEFAP 86 (91)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 66664
No 177
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.75 E-value=6.4e-05 Score=51.85 Aligned_cols=68 Identities=21% Similarity=0.254 Sum_probs=57.8
Q ss_pred CEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCC--cceEEEEecCHHHHHHHHHHhCCCccC
Q 014086 102 SEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSEN--KGFAFVTFRNVELASKAIDKLNNTEFK 169 (431)
Q Consensus 102 ~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~--~g~afV~f~~~e~a~~al~~l~~~~~~ 169 (431)
+.|.||+||+..|++++.+.++..|.+.....+..+.+-+. -.-|||.|.+.+++....+..+|..+.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~ 71 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL 71 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEE
Confidence 57999999999999999999999999998888776554322 245999999999999999999988764
No 178
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.67 E-value=0.00011 Score=47.01 Aligned_cols=61 Identities=25% Similarity=0.247 Sum_probs=52.3
Q ss_pred HHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCCccCCeEeeecccc
Q 014086 116 HDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNTEFKGKKIRCSTSQ 179 (431)
Q Consensus 116 ~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~~~~g~~i~v~~~~ 179 (431)
+-|.+.|+++|.|.++.+....+ | .-.|-|...+..+|..|+..|+...|++++|.|+++.
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~d-g--~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTD-Y--QLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCS-T--TCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHhheeEEEEEEEeccC-C--cEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 34667899999999999977633 3 4469999999999999999999999999999998765
No 179
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.85 E-value=0.049 Score=37.10 Aligned_cols=58 Identities=21% Similarity=0.303 Sum_probs=47.4
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhC
Q 014086 99 PHGSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLN 164 (431)
Q Consensus 99 ~~~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~ 164 (431)
+....||.-.+|......+|.++|+.||.|.--.| - --.|||...+.++|..++..+.
T Consensus 13 p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI-d-------dTSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 13 PKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI-D-------DTSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE-E-------TTEEEEECSCHHHHHHHHHHHH
T ss_pred CCcceeEEEeCCcccchhHHHHHhcCCCceEEEEe-c-------CceEEEEecCHHHHHHHHHHhc
Confidence 34567899999999999999999999998875554 2 2369999999999999886543
No 180
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.88 E-value=0.11 Score=35.28 Aligned_cols=55 Identities=18% Similarity=0.312 Sum_probs=44.3
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcC
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTE 338 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~ 338 (431)
..+|.-..|..+...+|.++|++||.|.=--| .+ --|||...+.++|..++..++
T Consensus 16 dHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI-dd-------TSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 16 DHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI-DD-------TSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE-ET-------TEEEEECSCHHHHHHHHHHHH
T ss_pred ceeEEEeCCcccchhHHHHHhcCCCceEEEEe-cC-------ceEEEEecCHHHHHHHHHHhc
Confidence 57899999999999999999999997543222 22 259999999999999887543
No 181
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=43.90 E-value=23 Score=24.52 Aligned_cols=40 Identities=10% Similarity=0.220 Sum_probs=29.8
Q ss_pred HHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhC
Q 014086 116 HDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLN 164 (431)
Q Consensus 116 ~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~ 164 (431)
.++++.+..+|.+ +| || +-..+|..|.+.++|.+|++.+.
T Consensus 60 ~~~~~~L~~~g~~---~M-----SG-SGstvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---RL-----TG-TGACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHHHTTTSCE---EE-----CT-TSSCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHHHhhcccc---ee-----cC-CCCEEEEEeCCHHHHHHHHHHcC
Confidence 3566777888853 33 23 45679999999999999998775
No 182
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=36.88 E-value=26 Score=22.32 Aligned_cols=53 Identities=11% Similarity=0.176 Sum_probs=36.7
Q ss_pred EEEecCCCCCCHHHHHHHHhc-cc-cEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHH
Q 014086 278 VYVKNLPRNVTQDQLKKLFEH-HG-RITKVVVPPAKPGQEKNRIGFVHFAERSSAMKA 333 (431)
Q Consensus 278 l~V~nLp~~~t~~~L~~~F~~-~G-~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~A 333 (431)
-|+=-++..++..+|+..++. |+ .|..|..+....+ +--|||++.....|...
T Consensus 23 ~y~F~V~~~A~K~~IK~AVe~lf~VkV~~Vnt~~~~~~---~KkA~V~L~~~~~a~di 77 (81)
T d1vqos1 23 KLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDG---EKKAVVRLSEDDDAQEV 77 (81)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECTTS---SEEEEEEECTTSCHHHH
T ss_pred EEEEEEcCcCCHHHHHHHHHHHcCCceeEEEEeEcCCC---cEEEEEEeCCCCcHHHH
Confidence 444556789999999999976 55 4777776554432 23699999877666554
No 183
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.19 E-value=53 Score=20.35 Aligned_cols=57 Identities=11% Similarity=0.232 Sum_probs=46.0
Q ss_pred CCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEec----CHHHHHHHHHHh
Q 014086 101 GSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFR----NVELASKAIDKL 163 (431)
Q Consensus 101 ~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~----~~e~a~~al~~l 163 (431)
.-+|.|.|+.-..-...|...|+..--|..+.+-.. .+.+-|.|. +.++..++|+.+
T Consensus 9 ~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~------~~~v~v~~d~~~~~~~~i~~~i~~~ 69 (79)
T d1kvja_ 9 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLE------EKNATIIYDPKLQTPKTLQEAIDDM 69 (79)
T ss_dssp EEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETT------TTEEEEEECTTTCCHHHHHHHHHHH
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECC------CCEEEEEECCCCCCHHHHHHHHHhc
Confidence 457899999988888999999999988988888543 667899984 667778888654
No 184
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=30.95 E-value=63 Score=21.85 Aligned_cols=44 Identities=16% Similarity=0.149 Sum_probs=32.4
Q ss_pred HHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHhCCC
Q 014086 116 HDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKLNNT 166 (431)
Q Consensus 116 ~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l~~~ 166 (431)
.+|++.+..+|... +.|- | |-..+|..|.+.+.|.++.+.+...
T Consensus 66 ~~~~~~l~~~g~~~-~~mS-----G-SGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLMS-----G-SGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-EEEC-----T-TSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-eeec-----C-CCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 45677777888643 4441 2 4567999999999999999988654
No 185
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=29.99 E-value=74 Score=21.34 Aligned_cols=48 Identities=8% Similarity=-0.134 Sum_probs=37.5
Q ss_pred HHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHHHh
Q 014086 116 HDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAIDKL 163 (431)
Q Consensus 116 ~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~~l 163 (431)
+.+.+.|++.|-+.......-...|..+-....+|.++++-.+|.+-+
T Consensus 32 ~~~~~~Lk~~Gl~r~~~~~iwNk~~~fr~~~i~EYkd~~Afk~Cq~i~ 79 (109)
T d2od6a1 32 PVWVKEMKSRGLLKFSMNRVWNKGEVFRVVMTYEYKDRASFEANIAYL 79 (109)
T ss_dssp HHHHHHHHTTTEEEEEEEEECSSSSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEEEeCCCCcEEEEEEEEECCHHHHHHHHHHH
Confidence 456677888898877665555555777888899999999999998754
No 186
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=23.08 E-value=33 Score=27.28 Aligned_cols=30 Identities=23% Similarity=0.321 Sum_probs=23.2
Q ss_pred cEEEEecCCCCCCHHHHHHHHhccccEEEE
Q 014086 276 KAVYVKNLPRNVTQDQLKKLFEHHGRITKV 305 (431)
Q Consensus 276 ~~l~V~nLp~~~t~~~L~~~F~~~G~v~~v 305 (431)
....|+|||++++..-|..++.....+..+
T Consensus 91 ~~~vvgNlPY~Iss~Il~~l~~~~~~~~~~ 120 (252)
T d1qyra_ 91 PLRVFGNLPYNISTPLMFHLFSYTDAIADM 120 (252)
T ss_dssp CEEEEEECCTTTHHHHHHHHHTTGGGEEEE
T ss_pred CeEEEecchHHHHHHHHHHhcccccceehh
Confidence 367889999999999998887655444443
No 187
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=20.63 E-value=39 Score=26.86 Aligned_cols=45 Identities=11% Similarity=0.201 Sum_probs=32.7
Q ss_pred CCEEEEcCCCCCCCHHHHHHHhhccCCeEEEEEeeCCCCCCCcceEEEEecCHHHHHHHHH
Q 014086 101 GSEVYIGGIPHDASEHDLRDFCQSIGEVTEVRIMKGKDSSENKGFAFVTFRNVELASKAID 161 (431)
Q Consensus 101 ~~~l~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~e~a~~al~ 161 (431)
.....|+|||+.++-.=|..++.....+..+.++.. .|-|++-+.
T Consensus 90 ~~~~vvgNlPY~Iss~Il~~l~~~~~~~~~~~~m~Q----------------kEvA~Ri~A 134 (252)
T d1qyra_ 90 QPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQ----------------KEVVNRLVA 134 (252)
T ss_dssp SCEEEEEECCTTTHHHHHHHHHTTGGGEEEEEEEEE----------------HHHHHHHHC
T ss_pred CCeEEEecchHHHHHHHHHHhcccccceehhhhhhh----------------HHHHHHhcc
Confidence 356889999999999988888776555655555443 577787663
No 188
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=20.23 E-value=1e+02 Score=20.81 Aligned_cols=41 Identities=15% Similarity=0.157 Sum_probs=29.3
Q ss_pred HHHHHHHhccccEEEEEecCCCCCCCcCCEEEEEeCCHHHHHHHHHhcCC
Q 014086 290 DQLKKLFEHHGRITKVVVPPAKPGQEKNRIGFVHFAERSSAMKALKNTEK 339 (431)
Q Consensus 290 ~~L~~~F~~~G~v~~v~i~~~~~~~~~rg~afV~F~~~~~A~~Al~~l~~ 339 (431)
.++++.+..+|. ++| +++ -...|..|.+.++|..|+..+..
T Consensus 60 ~~~~~~L~~~g~---~~M-----SGS-GstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 60 DAVLSWLLEYAP---SRL-----TGT-GACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHHTTTSC---EEE-----CTT-SSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHHhhccc---cee-----cCC-CCEEEEEeCCHHHHHHHHHHcCc
Confidence 456666778885 233 222 13789999999999999998853
Done!