Query 014092
Match_columns 431
No_of_seqs 165 out of 529
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 01:47:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014092.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014092hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3912 Predicted integral mem 100.0 1.9E-34 4E-39 274.2 18.7 308 97-420 6-334 (372)
2 PF06027 DUF914: Eukaryotic pr 100.0 1.4E-31 3E-36 268.0 24.4 281 108-425 28-310 (334)
3 PF08449 UAA: UAA transporter 99.9 2.7E-21 5.9E-26 192.4 25.3 270 123-426 31-303 (303)
4 TIGR00817 tpt Tpt phosphate/ph 99.9 1.3E-20 2.9E-25 186.9 22.5 289 101-429 6-302 (302)
5 PF04142 Nuc_sug_transp: Nucle 99.9 3.2E-21 7E-26 186.4 16.6 217 162-411 18-244 (244)
6 KOG2766 Predicted membrane pro 99.9 4.7E-23 1E-27 194.3 1.2 267 111-423 35-302 (336)
7 PTZ00343 triose or hexose phos 99.8 4.8E-19 1E-23 179.9 27.2 288 101-421 53-349 (350)
8 KOG2234 Predicted UDP-galactos 99.8 3E-19 6.5E-24 176.8 24.7 231 162-425 93-327 (345)
9 PLN00411 nodulin MtN21 family 99.8 6.3E-18 1.4E-22 172.0 23.7 290 96-426 16-334 (358)
10 PRK11272 putative DMT superfam 99.8 8.1E-17 1.8E-21 159.3 25.9 276 93-424 8-289 (292)
11 PRK11689 aromatic amino acid e 99.8 1.2E-16 2.6E-21 158.4 27.1 274 95-423 6-290 (295)
12 PRK11453 O-acetylserine/cystei 99.8 9.4E-17 2E-21 159.4 25.6 277 96-423 7-290 (299)
13 TIGR00950 2A78 Carboxylate/Ami 99.7 2.1E-15 4.6E-20 145.5 24.2 256 105-416 1-260 (260)
14 PRK15430 putative chlorampheni 99.7 1.6E-15 3.4E-20 150.5 23.6 279 92-422 7-287 (296)
15 PRK10532 threonine and homoser 99.7 8.7E-14 1.9E-18 137.8 27.4 273 93-427 12-288 (293)
16 KOG1583 UDP-N-acetylglucosamin 99.6 4E-16 8.7E-21 149.2 9.3 233 157-419 60-313 (330)
17 KOG1441 Glucose-6-phosphate/ph 99.6 1.2E-14 2.5E-19 144.7 14.2 293 98-429 18-316 (316)
18 TIGR03340 phn_DUF6 phosphonate 99.6 4.7E-13 1E-17 131.7 20.8 216 162-417 63-280 (281)
19 COG0697 RhaT Permeases of the 99.5 1.7E-11 3.8E-16 118.7 26.8 277 96-421 10-288 (292)
20 KOG2765 Predicted membrane pro 99.5 1.2E-12 2.7E-17 130.2 17.5 228 169-425 167-395 (416)
21 TIGR00688 rarD rarD protein. T 99.4 7.4E-11 1.6E-15 114.3 23.0 159 95-269 4-167 (256)
22 KOG1581 UDP-galactose transpor 99.3 2.2E-10 4.7E-15 111.7 20.4 264 120-419 47-312 (327)
23 PF08627 CRT-like: CRT-like; 99.2 6.4E-12 1.4E-16 107.0 5.0 74 93-166 56-130 (130)
24 TIGR00776 RhaT RhaT L-rhamnose 99.2 6.5E-09 1.4E-13 103.2 23.9 271 95-420 3-288 (290)
25 TIGR00803 nst UDP-galactose tr 99.1 2.1E-09 4.6E-14 102.2 14.5 220 165-418 3-222 (222)
26 KOG1582 UDP-galactose transpor 99.0 2.1E-08 4.4E-13 96.5 19.2 286 92-422 41-334 (367)
27 KOG4510 Permease of the drug/m 99.0 4.2E-10 9.2E-15 107.8 6.4 218 162-418 97-323 (346)
28 KOG1443 Predicted integral mem 98.8 8.2E-07 1.8E-11 87.0 20.4 222 167-420 90-315 (349)
29 PF13536 EmrE: Multidrug resis 98.8 1.8E-08 3.9E-13 86.0 7.7 83 154-237 27-110 (113)
30 KOG1580 UDP-galactose transpor 98.6 1.9E-07 4.2E-12 88.3 10.4 230 158-418 82-311 (337)
31 PF00892 EamA: EamA-like trans 98.6 1.4E-07 3.1E-12 79.8 8.6 121 105-231 3-124 (126)
32 PF03151 TPT: Triose-phosphate 98.5 1.1E-06 2.4E-11 78.0 12.5 152 249-420 1-153 (153)
33 KOG1444 Nucleotide-sugar trans 98.5 2E-05 4.3E-10 78.0 21.3 286 97-425 15-305 (314)
34 COG2510 Predicted membrane pro 98.4 5E-06 1.1E-10 71.9 12.5 130 98-232 8-138 (140)
35 COG2962 RarD Predicted permeas 98.3 0.00015 3.2E-09 71.1 21.6 272 93-423 7-286 (293)
36 KOG4314 Predicted carbohydrate 98.3 3.4E-06 7.3E-11 78.1 8.9 222 168-426 60-282 (290)
37 PF05653 Mg_trans_NIPA: Magnes 98.2 5.1E-05 1.1E-09 75.9 16.5 70 164-233 52-122 (300)
38 TIGR00950 2A78 Carboxylate/Ami 98.1 6.5E-05 1.4E-09 72.4 14.7 132 92-229 127-260 (260)
39 COG5006 rhtA Threonine/homoser 97.9 0.0099 2.1E-07 57.5 24.9 218 163-429 73-291 (292)
40 KOG2922 Uncharacterized conser 97.8 0.00026 5.6E-09 70.3 12.7 70 164-233 66-136 (335)
41 KOG1442 GDP-fucose transporter 97.8 2.2E-06 4.7E-11 82.9 -1.8 204 180-422 121-329 (347)
42 PRK15051 4-amino-4-deoxy-L-ara 97.8 0.00016 3.5E-09 61.8 9.1 63 170-232 46-108 (111)
43 PLN00411 nodulin MtN21 family 97.8 0.00041 8.9E-09 71.1 13.7 67 168-234 263-329 (358)
44 TIGR03340 phn_DUF6 phosphonate 97.6 0.00022 4.9E-09 70.1 8.5 67 164-230 213-280 (281)
45 PF03151 TPT: Triose-phosphate 97.6 0.0015 3.3E-08 57.7 13.0 67 164-230 84-150 (153)
46 PRK10532 threonine and homoser 97.4 0.0025 5.4E-08 63.2 13.7 69 165-233 212-281 (293)
47 PRK11689 aromatic amino acid e 97.4 0.0021 4.5E-08 63.8 12.1 69 165-233 219-287 (295)
48 PRK11272 putative DMT superfam 97.1 0.0071 1.5E-07 59.8 12.9 69 164-232 215-284 (292)
49 PRK11453 O-acetylserine/cystei 97.1 0.011 2.4E-07 58.6 14.2 70 164-233 217-287 (299)
50 PF08449 UAA: UAA transporter 97.0 0.011 2.4E-07 58.8 13.4 68 164-231 228-295 (303)
51 PRK02971 4-amino-4-deoxy-L-ara 97.0 0.013 2.9E-07 51.4 12.1 70 164-233 50-122 (129)
52 PF00892 EamA: EamA-like trans 96.9 0.002 4.2E-08 54.2 6.1 61 354-419 65-125 (126)
53 PTZ00343 triose or hexose phos 96.9 0.015 3.3E-07 59.3 13.2 61 170-230 285-345 (350)
54 TIGR00776 RhaT RhaT L-rhamnose 96.8 0.011 2.3E-07 58.8 11.2 70 163-232 213-287 (290)
55 PRK10452 multidrug efflux syst 96.8 0.0041 8.8E-08 53.9 7.0 71 163-233 32-103 (120)
56 PRK15430 putative chlorampheni 96.8 0.015 3.2E-07 57.8 11.9 67 167-233 219-285 (296)
57 PF10639 UPF0546: Uncharacteri 96.6 0.0065 1.4E-07 52.0 6.6 70 162-231 42-112 (113)
58 PRK10650 multidrug efflux syst 96.5 0.016 3.4E-07 49.4 8.6 68 164-231 38-106 (109)
59 TIGR00817 tpt Tpt phosphate/ph 96.5 0.018 4E-07 57.0 10.6 59 174-232 234-292 (302)
60 COG0697 RhaT Permeases of the 96.5 0.039 8.5E-07 53.1 12.6 70 163-232 216-286 (292)
61 COG2076 EmrE Membrane transpor 96.4 0.014 2.9E-07 49.4 7.3 70 162-231 31-101 (106)
62 PRK09541 emrE multidrug efflux 96.3 0.015 3.3E-07 49.6 7.3 68 166-233 35-103 (110)
63 PRK11431 multidrug efflux syst 96.2 0.016 3.5E-07 49.0 7.0 67 165-231 33-100 (105)
64 TIGR00803 nst UDP-galactose tr 96.2 0.085 1.9E-06 49.9 12.5 67 164-230 155-221 (222)
65 PF06800 Sugar_transport: Suga 96.1 0.94 2E-05 44.7 19.4 101 168-268 52-158 (269)
66 PF06800 Sugar_transport: Suga 95.7 0.13 2.8E-06 50.7 11.5 68 162-229 196-267 (269)
67 COG5070 VRG4 Nucleotide-sugar 95.5 0.1 2.2E-06 49.7 9.6 74 163-236 70-143 (309)
68 COG2510 Predicted membrane pro 95.5 0.095 2.1E-06 45.8 8.5 56 359-420 83-139 (140)
69 PRK02971 4-amino-4-deoxy-L-ara 95.2 0.071 1.5E-06 46.8 7.1 28 397-424 99-126 (129)
70 PF06027 DUF914: Eukaryotic pr 95.2 0.6 1.3E-05 47.5 14.7 134 93-234 168-306 (334)
71 PRK13499 rhamnose-proton sympo 94.8 3 6.6E-05 42.6 18.6 98 168-265 80-191 (345)
72 PF00893 Multi_Drug_Res: Small 94.7 0.11 2.5E-06 42.7 6.6 56 169-224 37-93 (93)
73 TIGR00688 rarD rarD protein. T 94.6 0.22 4.7E-06 48.1 9.6 137 249-418 3-140 (256)
74 KOG2765 Predicted membrane pro 94.0 0.81 1.8E-05 46.9 12.2 140 93-236 247-393 (416)
75 KOG1580 UDP-galactose transpor 93.2 0.088 1.9E-06 50.6 3.6 75 161-235 241-315 (337)
76 PF04657 DUF606: Protein of un 92.0 1 2.2E-05 39.9 8.7 74 156-230 60-138 (138)
77 COG1742 Uncharacterized conser 91.9 2.8 6.2E-05 35.2 10.5 48 188-235 59-106 (109)
78 PF04142 Nuc_sug_transp: Nucle 91.4 4 8.7E-05 39.6 12.9 59 166-224 186-244 (244)
79 COG5006 rhtA Threonine/homoser 91.1 0.55 1.2E-05 45.7 6.3 62 168-229 216-278 (292)
80 PRK15051 4-amino-4-deoxy-L-ara 90.4 1.2 2.5E-05 38.0 7.1 58 357-419 51-108 (111)
81 PF02694 UPF0060: Uncharacteri 90.1 4.5 9.7E-05 34.3 10.1 49 186-234 56-104 (107)
82 PRK10452 multidrug efflux syst 89.8 2.7 5.8E-05 36.5 9.0 30 396-425 79-108 (120)
83 KOG1441 Glucose-6-phosphate/ph 89.7 0.57 1.2E-05 47.3 5.4 63 168-230 242-304 (316)
84 PRK02237 hypothetical protein; 88.4 7.7 0.00017 32.9 10.3 48 187-234 59-106 (109)
85 COG2962 RarD Predicted permeas 88.2 3.5 7.7E-05 40.9 9.6 136 247-418 6-142 (293)
86 PRK13499 rhamnose-proton sympo 86.8 13 0.00027 38.2 13.0 67 166-233 265-341 (345)
87 KOG4510 Permease of the drug/m 86.3 1.7 3.6E-05 42.9 6.0 69 161-229 253-321 (346)
88 PF13536 EmrE: Multidrug resis 85.9 3.1 6.6E-05 35.0 6.9 62 356-423 48-109 (113)
89 PRK09541 emrE multidrug efflux 85.8 5.8 0.00013 33.8 8.5 27 397-423 80-106 (110)
90 KOG1581 UDP-galactose transpor 85.3 5.2 0.00011 40.1 8.9 69 162-230 242-310 (327)
91 PF05653 Mg_trans_NIPA: Magnes 84.8 11 0.00023 37.8 11.2 29 246-274 5-33 (300)
92 COG3238 Uncharacterized protei 78.4 9.9 0.00022 34.3 7.5 106 124-231 34-144 (150)
93 KOG2234 Predicted UDP-galactos 77.6 69 0.0015 32.8 14.0 66 167-232 256-321 (345)
94 COG2076 EmrE Membrane transpor 76.7 18 0.00038 30.8 8.0 27 396-422 79-105 (106)
95 PRK11431 multidrug efflux syst 72.6 27 0.00058 29.5 8.2 26 397-422 79-104 (105)
96 PRK10650 multidrug efflux syst 70.3 30 0.00066 29.4 8.1 24 397-420 85-108 (109)
97 KOG4831 Unnamed protein [Funct 69.8 6.2 0.00014 33.4 3.7 71 162-232 53-124 (125)
98 KOG4314 Predicted carbohydrate 68.1 41 0.00089 31.9 9.1 125 110-235 151-278 (290)
99 PF06570 DUF1129: Protein of u 64.8 95 0.0021 29.1 11.2 57 159-215 144-203 (206)
100 PF04342 DUF486: Protein of un 58.9 29 0.00064 29.4 5.7 46 186-231 60-106 (108)
101 COG4975 GlcU Putative glucose 58.4 7.1 0.00015 38.1 2.3 157 94-265 3-169 (288)
102 COG4858 Uncharacterized membra 54.6 76 0.0017 29.8 8.2 64 154-217 154-220 (226)
103 COG4975 GlcU Putative glucose 53.4 3.9 8.5E-05 39.9 -0.3 61 162-222 210-270 (288)
104 PF06379 RhaT: L-rhamnose-prot 49.8 87 0.0019 32.1 8.5 47 246-308 5-53 (344)
105 KOG1442 GDP-fucose transporter 48.7 17 0.00037 36.1 3.2 128 95-227 187-321 (347)
106 PF07857 DUF1632: CEO family ( 47.3 89 0.0019 30.7 8.0 122 97-232 4-133 (254)
107 KOG1583 UDP-N-acetylglucosamin 43.4 13 0.00028 37.0 1.5 40 192-231 273-312 (330)
108 KOG1443 Predicted integral mem 41.9 57 0.0012 33.0 5.7 53 179-231 261-313 (349)
109 PF04657 DUF606: Protein of un 39.0 2.7E+02 0.0058 24.4 11.7 21 397-417 118-138 (138)
110 PF15169 DUF4564: Domain of un 38.5 34 0.00074 31.9 3.3 73 209-299 15-90 (187)
111 PF06123 CreD: Inner membrane 36.3 2.5E+02 0.0054 29.8 9.8 30 188-217 401-430 (430)
112 PF04342 DUF486: Protein of un 34.8 50 0.0011 28.0 3.5 21 397-417 85-105 (108)
113 PF10639 UPF0546: Uncharacteri 33.2 1.1E+02 0.0024 26.2 5.5 21 397-417 91-111 (113)
114 PRK11715 inner membrane protei 32.5 3E+02 0.0065 29.2 9.6 30 188-217 407-436 (436)
115 KOG1444 Nucleotide-sugar trans 32.4 4.4E+02 0.0096 26.7 10.3 57 172-228 239-295 (314)
116 PF06379 RhaT: L-rhamnose-prot 30.4 93 0.002 31.9 5.2 105 164-268 76-193 (344)
117 PF05297 Herpes_LMP1: Herpesvi 29.9 17 0.00038 36.1 0.0 125 81-226 15-147 (381)
118 COG3169 Uncharacterized protei 29.7 56 0.0012 27.4 2.9 30 201-230 83-112 (116)
119 PF06210 DUF1003: Protein of u 29.7 1.4E+02 0.003 25.4 5.4 37 92-130 4-40 (108)
120 PF10951 DUF2776: Protein of u 29.6 1.9E+02 0.0041 29.1 7.0 43 164-206 229-272 (347)
121 PF09771 Tmemb_18A: Transmembr 27.3 1.5E+02 0.0033 25.9 5.4 22 87-108 25-46 (125)
122 KOG1582 UDP-galactose transpor 27.2 6.2E+02 0.013 25.5 10.0 52 186-237 285-336 (367)
123 PF04973 NMN_transporter: Nico 26.0 5E+02 0.011 23.6 11.3 24 185-208 107-130 (181)
124 PF02694 UPF0060: Uncharacteri 23.4 56 0.0012 27.8 1.9 31 393-423 76-106 (107)
125 PF07857 DUF1632: CEO family ( 22.5 1.7E+02 0.0036 28.8 5.3 63 358-421 70-135 (254)
126 PF00893 Multi_Drug_Res: Small 21.8 2.1E+02 0.0046 23.1 5.1 15 397-411 79-93 (93)
127 PRK02237 hypothetical protein; 20.6 55 0.0012 27.9 1.3 29 394-422 79-107 (109)
128 COG3169 Uncharacterized protei 20.1 1.5E+02 0.0032 25.0 3.6 21 397-417 92-112 (116)
No 1
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=100.00 E-value=1.9e-34 Score=274.17 Aligned_cols=308 Identities=18% Similarity=0.170 Sum_probs=235.0
Q ss_pred HHHHHHHHhhhhHHHHHHHHhcc------CCChhHHHHHHHHHHHHHHHHHHHHHHHhccc---cc-------cccccCC
Q 014092 97 ISSAVTVTLAIANRVLYKLALVP------MKQYPFFLAQITTFGYVVIYFSILYTRYLMGI---VT-------DEMISLP 160 (431)
Q Consensus 97 i~~~~~li~Gs~n~v~~K~~~~~------~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~---~~-------~~~~~~p 160 (431)
++.+.|+..|++|.++.|++... -++||+.++..|++|++.|+....+.|++... .. ++...++
T Consensus 6 ~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~ 85 (372)
T KOG3912|consen 6 FLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN 85 (372)
T ss_pred hhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC
Confidence 46778999999999999999863 47899999999999997777655434433211 11 1111333
Q ss_pred CchhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCC---
Q 014092 161 KYRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSN--- 237 (431)
Q Consensus 161 ~~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~--- 237 (431)
...+..+++||.++..+++.|+.+|+++.+||+|++.++|+.++|..||+|+++.+||+|+..+.+|++++...+-.
T Consensus 86 p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~ 165 (372)
T KOG3912|consen 86 PVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT 165 (372)
T ss_pred cceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc
Confidence 44566789999999999999999999999999999999999999999999999999999999999999999765321
Q ss_pred CCCccccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHH-HHHHHHhhhccCCCCCC
Q 014092 238 SGQMLSRVDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALF-VLLFLPFLSNLKGIPFA 316 (431)
Q Consensus 238 ~~~~~~~~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~-g~llLpi~~~~~g~~~~ 316 (431)
+.-..-.+.+.|+++++.|++.-|+|.|+||| ++|..+++|...++|+++|++.+ ..+.+|+....-|.+++
T Consensus 166 ~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek-------~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS 238 (372)
T KOG3912|consen 166 DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEK-------QLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFS 238 (372)
T ss_pred CCccccccchhhhHHHHHHHHHHHHHHHHHHh-------hhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCc
Confidence 11111123577999999999999999999996 44555899999999999999554 45556665433332333
Q ss_pred CchHh-HhhhhHhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCC
Q 014092 317 ELPLY-LKSGAGCLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLP 395 (431)
Q Consensus 317 ~~~~~-~~~g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~ 395 (431)
--++- +.|-...+-..+..+ ........+++++++||+.+..++|+.||+++.+.+.+| ...+|++++.+
T Consensus 239 ~~~~g~~eD~~~~~~~~~e~p----~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lR-t~~IWv~si~m---- 309 (372)
T KOG3912|consen 239 CNPRGVLEDWGDAFAALQESP----SLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLR-TYVIWVFSIAM---- 309 (372)
T ss_pred CCCCcchhhHHHHHHHhcCCc----hhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhh-hhhhhHhHHHH----
Confidence 22222 222222222222100 122334556778889999999999999999999999988 58899998876
Q ss_pred CCCCCcHHHHHHHHHHHhhheeecC
Q 014092 396 EGASLSPFFLFGSVILLLGLTLYNL 420 (431)
Q Consensus 396 ~gE~ls~~~liG~~lI~~Gv~lYn~ 420 (431)
++|.+...++.|++++..|+++||.
T Consensus 310 ~~E~f~llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 310 GWEYFHLLQILGFLILIMGIILYNQ 334 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999983
No 2
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=100.00 E-value=1.4e-31 Score=267.99 Aligned_cols=281 Identities=16% Similarity=0.197 Sum_probs=213.9
Q ss_pred hHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHHHHHHHHHHHHhhccCCc
Q 014092 108 ANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLEALGVASGMAAAAMLPG 187 (431)
Q Consensus 108 ~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld~~~~~l~~~g~~~~~~ 187 (431)
.|.....+... -.+.|.+|+.++.+..+++|.++...|+..+... +..+.++|+++++|++|+.+|++.+.|+.||+.
T Consensus 28 t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~-~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsv 105 (334)
T PF06027_consen 28 TGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWL-KVLKRPWWKYFLLALLDVEANYLVVLAYQYTSV 105 (334)
T ss_pred HHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccch-hhcchhHHHHHHHHHHHHHHHHHHHHHhhcccH
Confidence 44444444444 5568999998877776677776654454432222 234567899999999999999999999999999
Q ss_pred cHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCC--ccccccchHHHHHHHHHHHHHHHHH
Q 014092 188 PAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQ--MLSRVDFLWPSMMIASSAFQAGASI 265 (431)
Q Consensus 188 ~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~--~~~~~~~ig~~lillA~i~~A~s~V 265 (431)
+..|+|+|+.+||++++|+++||+||++.|++|++++++|++++..+|..+++ ..++++++|++++++|++++|+++|
T Consensus 106 tS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV 185 (334)
T PF06027_consen 106 TSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNV 185 (334)
T ss_pred hHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877643321 2345689999999999999999999
Q ss_pred HHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhhHhhhccCCCCCCCCCccHH
Q 014092 266 IKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGAGCLLNLGANTSGCNGAPLL 345 (431)
Q Consensus 266 ~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~~c~~g~~~~~~~c~~a~~~ 345 (431)
+||+.++| .|..++.+|+|+|++++..+.+.++ |. +++.+..|++ .....
T Consensus 186 ~~E~~v~~---------~~~~~~lg~~Glfg~ii~~iq~~il---e~---~~i~~~~w~~---------------~~~~~ 235 (334)
T PF06027_consen 186 LEEKLVKK---------APRVEFLGMLGLFGFIISGIQLAIL---ER---SGIESIHWTS---------------QVIGL 235 (334)
T ss_pred HHHHhccc---------CCHHHHHHHHHHHHHHHHHHHHHhe---eh---hhhhccCCCh---------------hhHHH
Confidence 99986643 4566788999999999865544443 32 2222211111 11223
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHhhheeecCCCCCc
Q 014092 346 PLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLLGLTLYNLPQPAK 425 (431)
Q Consensus 346 ~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~Gv~lYn~~~~~~ 425 (431)
...|.++...++.+...+++..||+..++.. +...+.++++++.+ .|++++|.+++|+++|++|+++|+..+++.
T Consensus 236 ~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsL-LTsd~~ali~~i~~----f~~~~~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 236 LVGYALCLFLFYSLVPIVLRMSSATFFNLSL-LTSDFYALIIDIFF----FGYKFSWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccceeehHH-HHhhHHHHHHHHHh----cCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence 5667777777777878999999999999964 44455556666533 489999999999999999999999876543
No 3
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.89 E-value=2.7e-21 Score=192.39 Aligned_cols=270 Identities=22% Similarity=0.288 Sum_probs=190.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHH
Q 014092 123 YPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQL 202 (431)
Q Consensus 123 ~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~ 202 (431)
+|.+++...++...++..... ...+ .++.++.|.++++++++++..+..+.+.++.|+|.+.+++++++.++++|
T Consensus 31 ~~~~lt~~q~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vm 105 (303)
T PF08449_consen 31 FPLFLTFVQFAFNALFSFILL--SLFK---FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVM 105 (303)
T ss_pred ccHHHHHHHHHHHHHHHHHHH--Hhcc---ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHH
Confidence 799999885554433222211 1111 23344667788999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCC---ccccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 014092 203 GFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQ---MLSRVDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLK 279 (431)
Q Consensus 203 llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~---~~~~~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk 279 (431)
+++.+++||||+++|+++++++.+|+++...++..+++ ....+...|+++++++.++.|+.+++||+.+++|+
T Consensus 106 i~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~---- 181 (303)
T PF08449_consen 106 ILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYG---- 181 (303)
T ss_pred HHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 99999999999999999999999999998766543221 11112234999999999999999999999998872
Q ss_pred CCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhhHhhhccCCCCCCCCCccHHHHHHHHHHHHHHHH
Q 014092 280 GKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGAGCLLNLGANTSGCNGAPLLPLLYIATNMAFNIS 359 (431)
Q Consensus 280 ~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~ 359 (431)
.+++++..+...++.++..+..+.+. .+ +.. +++.-..... ......+++.++....+..
T Consensus 182 ---~~~~~~mfy~n~~~~~~~~~~~~~l~--~~----~~~----~~~~f~~~~p-------~~~~~l~~~s~~~~~g~~~ 241 (303)
T PF08449_consen 182 ---KSPWELMFYTNLFSLPFLLILLFLLP--TG----EFR----SAIRFISAHP-------SVLLYLLLFSLTGALGQFF 241 (303)
T ss_pred ---CcHHHHHHHHHHHHHHHHHHHHHHHH--hh----Hhh----HHHHHHHHhH-------HHHHHHHHHHHHHHHHHHH
Confidence 45566666555565555333222211 11 111 1111000100 0112233444445555555
Q ss_pred HHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHhhheeecCCCCCcc
Q 014092 360 MLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLLGLTLYNLPQPAKR 426 (431)
Q Consensus 360 ~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~Gv~lYn~~~~~~~ 426 (431)
...++|+.||.+.+++.++|-+++.++ +..+ .|+++++.+++|.++++.|+.+|+..++||+
T Consensus 242 i~~~~~~~~al~~t~v~t~Rk~~sill-S~~~----f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 242 IFYLIKKFSALTTTIVTTLRKFLSILL-SVII----FGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HHHHHHhcCchhhhhHHHHHHHHHHHH-HHHh----cCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 667889999999999999886555444 4433 3899999999999999999999998887764
No 4
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.87 E-value=1.3e-20 Score=186.93 Aligned_cols=289 Identities=19% Similarity=0.211 Sum_probs=192.6
Q ss_pred HHHHhhhhH---HHHHHHHhccCCChhHHHHHH-HHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHHHHHHHH
Q 014092 101 VTVTLAIAN---RVLYKLALVPMKQYPFFLAQI-TTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLEALGVA 176 (431)
Q Consensus 101 ~~li~Gs~n---~v~~K~~~~~~~~~Pffla~l-~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld~~~~~ 176 (431)
..++|...| .+.-|+..++ .++|.+++.. +.++.+.+.. .+.....+ +++..+..+++++.+|++.+....
T Consensus 6 ~~~~w~~~~~~~~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~ 80 (302)
T TIGR00817 6 LFGLWYFLNVYFNIYNKKLLNV-FPYPYFKTLISLAVGSLYCLL--SWSSGLPK--RLKISSALLKLLLPVAIVHTIGHV 80 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-CChhHHHHHHHHHHHHHHHHH--HHHhCCCC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345555555 5677888876 4689999988 3334322211 11100000 011111123457778999888888
Q ss_pred HHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchHHHHHHHH
Q 014092 177 SGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLWPSMMIAS 256 (431)
Q Consensus 177 l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig~~lillA 256 (431)
+.+.++.+++++..+++..+.++++++++++++|||+++++++|++++++|+++.... +.+ ....|+++.++|
T Consensus 81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~--~~~-----~~~~G~~~~l~a 153 (302)
T TIGR00817 81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT--ELS-----FNWAGFLSAMIS 153 (302)
T ss_pred HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC--ccc-----ccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999865321 111 145699999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHH-HHHhhhccCCCCCCCchHhHhhhhHhhhccCCC
Q 014092 257 SAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLL-FLPFLSNLKGIPFAELPLYLKSGAGCLLNLGAN 335 (431)
Q Consensus 257 ~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~l-lLpi~~~~~g~~~~~~~~~~~~g~~c~~g~~~~ 335 (431)
++++|+.+++.|+.. ++++.|++.++. ||.+++.+ ++|+....++.+. .. +.+.... ..
T Consensus 154 ~~~~a~~~v~~k~~~-------~~~~~~~~~~~~----~~~~~~~~~l~p~~~~~~~~~~--~~----~~~~~~~--~~- 213 (302)
T TIGR00817 154 NITFVSRNIFSKKAM-------TIKSLDKTNLYA----YISIMSLFLLSPPAFITEGPPF--LP----HGFMQAI--SG- 213 (302)
T ss_pred HHHHHHHHHHHHHhh-------ccCCCCcccHHH----HHHHHHHHHHHHHHHHHcchHH--HH----HHHHHhh--cc-
Confidence 999999999988643 323578888888 55555543 5565443333110 00 0110000 00
Q ss_pred CCCCCCccHHH-HHH--HHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHH
Q 014092 336 TSGCNGAPLLP-LLY--IATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILL 412 (431)
Q Consensus 336 ~~~c~~a~~~~-lly--l~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~ 412 (431)
-....... .++ ..+...+|...+..+|+.||++.++.. ..-|+.+.+++..+ .||++++.+++|.++++
T Consensus 214 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~-~l~pv~~~~~~~~~----lge~lt~~~~~G~~lil 285 (302)
T TIGR00817 214 ---VNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGN-CMKRVVVIVVSILF----FGTKISPQQVFGTGIAI 285 (302)
T ss_pred ---cCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHh-hhhhhheeeeehhh----cCCCCchhHHHHHHHHH
Confidence 00001111 111 112334555556789999999999985 46699998887544 49999999999999999
Q ss_pred hhheeecCCCCCccccc
Q 014092 413 LGLTLYNLPQPAKRSSK 429 (431)
Q Consensus 413 ~Gv~lYn~~~~~~~~~~ 429 (431)
.|+++|+..+.+|++.|
T Consensus 286 ~Gv~l~~~~k~~~~~~~ 302 (302)
T TIGR00817 286 AGVFLYSRVKAQKPKPK 302 (302)
T ss_pred HHHHHHHHHhccCcCCC
Confidence 99999998766665543
No 5
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.87 E-value=3.2e-21 Score=186.37 Aligned_cols=217 Identities=21% Similarity=0.244 Sum_probs=167.2
Q ss_pred chhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCC---
Q 014092 162 YRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNS--- 238 (431)
Q Consensus 162 ~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~--- 238 (431)
+++++|+++|+++|.+.++++.+++++.+|+++|+.+++|+++++++||||++++||+++++.++|++++..++...
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~ 97 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDN 97 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccccc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999997643321
Q ss_pred -C-Cc-----cccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccC
Q 014092 239 -G-QM-----LSRVDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLK 311 (431)
Q Consensus 239 -~-~~-----~~~~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~ 311 (431)
+ +. ...+...|..+++++++++|+++||+|+++ |+++.+.|..|.|.+.++.++.++..... +
T Consensus 98 ~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~l-------K~~~~s~~~~N~qL~~~gi~~~~~~~~~~---~ 167 (244)
T PF04142_consen 98 SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLL-------KRSNVSLWIQNMQLYLFGILFNLLALLLS---D 167 (244)
T ss_pred ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHh-------cccchhHHHHHHHHHHHHHHHHHHHHhcc---c
Confidence 1 11 123457899999999999999999999765 55668889899888888887764442222 1
Q ss_pred CCCCCCchHhHhhhhHhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhccc
Q 014092 312 GIPFAELPLYLKSGAGCLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPL 391 (431)
Q Consensus 312 g~~~~~~~~~~~~g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~ 391 (431)
+.+..+ +|+ .++-....++-++.+...++....++||.+++...+...+.+.+++++-...
T Consensus 168 ~~~~~~------~g~------------f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~l- 228 (244)
T PF04142_consen 168 GSAISE------SGF------------FHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLL- 228 (244)
T ss_pred cccccc------CCc------------hhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-
Confidence 111111 111 1111223556667778888888899999999999998877766666554333
Q ss_pred CCCCCCCCCcHHHHHHHHHH
Q 014092 392 PYLPEGASLSPFFLFGSVIL 411 (431)
Q Consensus 392 ~~l~~gE~ls~~~liG~~lI 411 (431)
.|.+++..+++|.++|
T Consensus 229 ----f~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 229 ----FGFPPSLSFLLGAALV 244 (244)
T ss_pred ----hCCCCchHHhhheecC
Confidence 3899999999987654
No 6
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.86 E-value=4.7e-23 Score=194.33 Aligned_cols=267 Identities=16% Similarity=0.149 Sum_probs=194.6
Q ss_pred HHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHHHHHHHHHHHHhhccCCccHH
Q 014092 111 VLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLEALGVASGMAAAAMLPGPAI 190 (431)
Q Consensus 111 v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld~~~~~l~~~g~~~~~~~~~ 190 (431)
.....+...--|-|-+|+.+......++|.++..+|++ . .+..|+++.++|+.|+.+|++..-|.+||+-...
T Consensus 35 ~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~--~-----~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi 107 (336)
T KOG2766|consen 35 FTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK--Y-----IKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSI 107 (336)
T ss_pred hhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH--H-----HHHHHHHhhheeEEeecccEEEeeehhhcchHHH
Confidence 33333443334568888877443334566666544432 1 1334567899999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCC-ccccccchHHHHHHHHHHHHHHHHHHHHH
Q 014092 191 PILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQ-MLSRVDFLWPSMMIASSAFQAGASIIKEF 269 (431)
Q Consensus 191 ~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~-~~~~~~~ig~~lillA~i~~A~s~V~~E~ 269 (431)
++|.+..+|..+++|++|||.||++.|+.|+++|..||++++.++..+++ +.++|+..|+.++++++-++|++|+.||.
T Consensus 108 ~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEf 187 (336)
T KOG2766|consen 108 MLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEF 187 (336)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHH
Confidence 99999999999999999999999999999999999999999987654332 23467899999999999999999999998
Q ss_pred hhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhhHhhhccCCCCCCCCCccHHHHHH
Q 014092 270 IFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGAGCLLNLGANTSGCNGAPLLPLLY 349 (431)
Q Consensus 270 ~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~~c~~g~~~~~~~c~~a~~~~lly 349 (431)
+. ++.|..++.++.++|+.+++++- ++... .+.....|| ++...++.+
T Consensus 188 lv---------kn~d~~elm~~lgLfGaIIsaIQ-~i~~~------~~~~tl~w~----------------~~i~~yl~f 235 (336)
T KOG2766|consen 188 LV---------KNADRVELMGFLGLFGAIISAIQ-FIFER------HHVSTLHWD----------------SAIFLYLRF 235 (336)
T ss_pred HH---------hcCcHHHHHHHHHHHHHHHHHHH-Hhhhc------cceeeEeeh----------------HHHHHHHHH
Confidence 65 25677888899999999998775 33321 112111121 122334556
Q ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHhhheeecCCCC
Q 014092 350 IATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLLGLTLYNLPQP 423 (431)
Q Consensus 350 l~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~Gv~lYn~~~~ 423 (431)
..+.+.++-+...+.|.+||+..++.. ++ ---| ++.+.. .|-.++|.+.++++.+..|.++|..+++
T Consensus 236 ~L~MFllYsl~pil~k~~~aT~~nlsl--LT-sDmw--sl~i~~--FgYhv~wLY~laF~~i~~GliiYs~re~ 302 (336)
T KOG2766|consen 236 ALTMFLLYSLAPILIKTNSATMFNLSL--LT-SDMW--SLLIRT--FGYHVDWLYFLAFATIATGLIIYSTREK 302 (336)
T ss_pred HHHHHHHHHhhHHheecCCceEEEhhH--hH-HHHH--HHHHHH--HhcchhhhhHHHHHHHHHhhEEeecccc
Confidence 666666777778899999999998852 21 1111 111111 1556899999999999999999965543
No 7
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.85 E-value=4.8e-19 Score=179.86 Aligned_cols=288 Identities=15% Similarity=0.157 Sum_probs=190.7
Q ss_pred HHHHhhhhH---HHHHHHHhccCCChhHHHHHH-HHHHHHHHHHHHHHH-HHhc-cccccccccCCCchhhHHHHHHHHH
Q 014092 101 VTVTLAIAN---RVLYKLALVPMKQYPFFLAQI-TTFGYVVIYFSILYT-RYLM-GIVTDEMISLPKYRFLFIGMLEALG 174 (431)
Q Consensus 101 ~~li~Gs~n---~v~~K~~~~~~~~~Pffla~l-~~~~~~ll~~~il~~-r~~~-~~~~~~~~~~p~~~~~iiglld~~~ 174 (431)
.++.|-..| .+..|.....+ ++|++++.+ +.++.+.+ . +++. ++++ .+.+ ..+..+++++.+|++....
T Consensus 53 ~~~~wy~~s~~~~~~nK~vl~~~-~~P~~l~~~~~~~~~l~~-~-~~~~~~~~~~~~~~--~~~~~~~~llp~gl~~~~~ 127 (350)
T PTZ00343 53 LFLTWYALNVLYVVDNKLALNML-PLPWTISSLQLFVGWLFA-L-LYWATGFRKIPRIK--SLKLFLKNFLPQGLCHLFV 127 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-ChhHHHHHHHHHHHHHHH-H-HHHHhCCCCCCCCC--CHHHHHHHHHHHHHHHHHH
Confidence 445555555 67788888776 479999999 44443221 1 1111 1111 1110 0111234577889999888
Q ss_pred HHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchHHHHHH
Q 014092 175 VASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLWPSMMI 254 (431)
Q Consensus 175 ~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig~~lil 254 (431)
+...++++.+++++..++++.+.++++++++++++|||+++++++|++++++|+.++...+.+ . ...|.++.+
T Consensus 128 ~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~----~---~~~G~~~~l 200 (350)
T PTZ00343 128 HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELH----F---TWLAFWCAM 200 (350)
T ss_pred HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccch----h---HHHHHHHHH
Confidence 888889999999999999999999999999999999999999999999999999998642211 1 367999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHH-HHHhhhccCCCCCCCchHhHhhhhHhhhccC
Q 014092 255 ASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLL-FLPFLSNLKGIPFAELPLYLKSGAGCLLNLG 333 (431)
Q Consensus 255 lA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~l-lLpi~~~~~g~~~~~~~~~~~~g~~c~~g~~ 333 (431)
+|++++|+.+++.|+..++++. ++++.++..+.. ++.+++.+ ++|+....|+ .+......+.. ....
T Consensus 201 ~s~~~~a~~~i~~k~~~~~~~~--~~~~~~~~~~~~----~~~~~~~l~~lp~~~~~e~---~~~~~~~~~~~---~~~~ 268 (350)
T PTZ00343 201 LSNLGSSLRSIFAKKTMKNKSE--IGENLTASNIYM----LLTLIASLISLPLVLFFEG---KKWVPVWTNYT---ANMT 268 (350)
T ss_pred HHHHHHHHHHHHHHHHhccccc--ccccCCHHHHHH----HHHHHHHHHHHHHHHHHhh---HHHHHHHHHhh---hccc
Confidence 9999999999999987655421 223355443322 33445443 5666543332 11111100000 0000
Q ss_pred CCCCCCCCccHH--HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHH
Q 014092 334 ANTSGCNGAPLL--PLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVIL 411 (431)
Q Consensus 334 ~~~~~c~~a~~~--~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI 411 (431)
.-.....+ .+...+....+|...+..+++.++.+.++...+. |+.+++++..+ .||++++.+++|.+++
T Consensus 269 ----~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk-~V~~iv~s~l~----~ge~lt~~~~iG~~li 339 (350)
T PTZ00343 269 ----NYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLK-RVVIIVSSIII----FQTQVTLLGYLGMAVA 339 (350)
T ss_pred ----ccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH-HHHHhhhhHHH----hCCCCchHhHHHHHHH
Confidence 00011111 1222333445666666799999999999987654 88888888654 4999999999999999
Q ss_pred HhhheeecCC
Q 014092 412 LLGLTLYNLP 421 (431)
Q Consensus 412 ~~Gv~lYn~~ 421 (431)
+.|+++|+.-
T Consensus 340 i~Gv~lYs~~ 349 (350)
T PTZ00343 340 ILGALLYSLF 349 (350)
T ss_pred HHHHHHHhhc
Confidence 9999999864
No 8
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.85 E-value=3e-19 Score=176.82 Aligned_cols=231 Identities=19% Similarity=0.244 Sum_probs=181.4
Q ss_pred chhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEecc---CCCC
Q 014092 162 YRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVAS---GSNS 238 (431)
Q Consensus 162 ~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s---~~~~ 238 (431)
.++.+|+++++++|.+.++++.|.|+..+|+..|..|+.|++++.++|+||++++||.++++.++|++++..+ +.++
T Consensus 93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a 172 (345)
T KOG2234|consen 93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA 172 (345)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999732 2221
Q ss_pred C-CccccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCC
Q 014092 239 G-QMLSRVDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAE 317 (431)
Q Consensus 239 ~-~~~~~~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~ 317 (431)
. .....+.+.|...++.+|..+++++||.|++ +|+.+.+.|..|-..+.++.++.++.+... ++ +.
T Consensus 173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEki-------LK~s~~s~wi~NiqL~~~g~~f~~l~~~~~---d~---~~ 239 (345)
T KOG2234|consen 173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKI-------LKGSNVSLWIRNIQLYFFGILFNLLTILLQ---DG---EA 239 (345)
T ss_pred cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHH-------HhcCCchHHHHHHHHHHHHHHHHHHHHhhc---cc---cc
Confidence 1 1223568999999999999999999999965 477788999888877777777654322221 11 11
Q ss_pred chHhHhhhhHhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCC
Q 014092 318 LPLYLKSGAGCLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEG 397 (431)
Q Consensus 318 ~~~~~~~g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~g 397 (431)
.. +.|+ ..|-..+.++-+..+.+.++....++||.++.....+.++.+.++.++. +. + +|
T Consensus 240 i~---~~gf------------f~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S-~~---L-f~ 299 (345)
T KOG2234|consen 240 IN---EYGF------------FYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVAS-IA---L-FD 299 (345)
T ss_pred cc---cCCc------------cccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HH---H-cc
Confidence 11 3333 2233345677777888888888899999999999998766665665554 22 2 37
Q ss_pred CCCcHHHHHHHHHHHhhheeecCCCCCc
Q 014092 398 ASLSPFFLFGSVILLLGLTLYNLPQPAK 425 (431)
Q Consensus 398 E~ls~~~liG~~lI~~Gv~lYn~~~~~~ 425 (431)
-.+|..++.|..+|+..+.+|+..+.+.
T Consensus 300 ~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 300 FQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred CCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 7889999999999999999999666554
No 9
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.80 E-value=6.3e-18 Score=172.03 Aligned_cols=290 Identities=11% Similarity=0.083 Sum_probs=178.5
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHH-HHHHHHHHHHHHHHHHHhcccccc-ccccCCCchhhHHHHHHHH
Q 014092 96 IISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQI-TTFGYVVIYFSILYTRYLMGIVTD-EMISLPKYRFLFIGMLEAL 173 (431)
Q Consensus 96 ~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l-~~~~~~ll~~~il~~r~~~~~~~~-~~~~~p~~~~~iiglld~~ 173 (431)
+..+.+-+.-+ ...++.|...+.-- .|+.+..+ ..++. ++..++.+.+.+.+..++ +++ .+.++.++|++...
T Consensus 16 ~~~~~~q~~~~-~~~~~~k~a~~~G~-~~~~~~~~R~~iA~-l~Ll~~~~~~~~~~~~~~~~~~--~~~~l~l~g~~g~~ 90 (358)
T PLN00411 16 TAMLATETSVV-GISTLFKVATSKGL-NIYPFLGYSYLLAS-LLLLPSLFFTNRSRSLPPLSVS--ILSKIGLLGFLGSM 90 (358)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHCCC-CccHHHHHHHHHHH-HHHHHHHHHHHHhcccCcchHH--HHHHHHHHHHHHHH
Confidence 33444444444 55677777775422 24555555 22332 222323232222111111 111 12346667887755
Q ss_pred HHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHH------hcCccchhHHHHHHHHhhheeEEeccCCCC---------
Q 014092 174 GVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVL------LGKKFSVTQIAGCLLVATGVGVAVASGSNS--------- 238 (431)
Q Consensus 174 ~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~f------Lk~r~~~~qiiG~~lv~~GV~vv~~s~~~~--------- 238 (431)
.+.+.+.|+.+++++..+++.++.++|++++++++ +|||++.+|++|++++++|++++...++..
T Consensus 91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~ 170 (358)
T PLN00411 91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY 170 (358)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence 55689999999999999999999999999999999 699999999999999999998875422110
Q ss_pred ---------CCccccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHH-HHHhhh
Q 014092 239 ---------GQMLSRVDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLL-FLPFLS 308 (431)
Q Consensus 239 ---------~~~~~~~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~l-lLpi~~ 308 (431)
......+..+|+++.++|+++||+.++++++..++| -+....++ ++.+++.+ ..+...
T Consensus 171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~--------~~~~~~t~----~~~~~~~~~~~~~~l 238 (358)
T PLN00411 171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY--------PAAFTVSF----LYTVCVSIVTSMIGL 238 (358)
T ss_pred ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CcHhHHHH----HHHHHHHHHHHHHHH
Confidence 000011125589999999999999999999765544 12222334 44444332 222222
Q ss_pred ccCCCCCCCchHhHhhhhHhhhccCCCCCCCCCccHHHHHHHH--HHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHh
Q 014092 309 NLKGIPFAELPLYLKSGAGCLLNLGANTSGCNGAPLLPLLYIA--TNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYV 386 (431)
Q Consensus 309 ~~~g~~~~~~~~~~~~g~~c~~g~~~~~~~c~~a~~~~llyl~--~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~ 386 (431)
..++.+..... ..+ ....+.++|.. ..++| .++...+|+.++...++.. ...|+++.+
T Consensus 239 ~~~~~~~~~~~----~~~--------------~~~~~~i~y~~i~t~lay-~lw~~~v~~~ga~~as~~~-~L~PV~a~l 298 (358)
T PLN00411 239 VVEKNNPSVWI----IHF--------------DITLITIVTMAIITSVYY-VIHSWTVRHKGPLYLAIFK-PLSILIAVV 298 (358)
T ss_pred HHccCCcccce----ecc--------------chHHHHHHHHHHHHHHHH-HHHHHHHhccCchHHHHHH-hHHHHHHHH
Confidence 22221000000 000 00112233322 22233 3445677888888888865 577999999
Q ss_pred hhcccCCCCCCCCCcHHHHHHHHHHHhhheeecCCCCCcc
Q 014092 387 LSLPLPYLPEGASLSPFFLFGSVILLLGLTLYNLPQPAKR 426 (431)
Q Consensus 387 fs~~~~~l~~gE~ls~~~liG~~lI~~Gv~lYn~~~~~~~ 426 (431)
++..+ .||++++.+++|.++|+.|+++.+++++++.
T Consensus 299 lg~l~----LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~ 334 (358)
T PLN00411 299 MGAIF----LNDSLYLGCLIGGILITLGFYAVMWGKANEE 334 (358)
T ss_pred HHHHH----hCCCCcHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 98765 4999999999999999999999987765543
No 10
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.78 E-value=8.1e-17 Score=159.32 Aligned_cols=276 Identities=16% Similarity=0.188 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHH-HHHHHHHHHHHHhccccccccccCCCchhhHHHHHH
Q 014092 93 QIIIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGY-VVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLE 171 (431)
Q Consensus 93 ~~i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~-~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld 171 (431)
..+..+++..++|| .|.+..|...+++. |+..+.+ ++.. .++..++...+ +.+ .+ . +..+++..+.|.+.
T Consensus 8 ~~~~~~~~~~~iWg-~~~~~~K~~~~~~~--p~~~~~~-R~~~a~l~ll~~~~~~-~~~-~~--~-~~~~~~~~~~g~~~ 78 (292)
T PRK11272 8 PLFGALFALYIIWG-STYLVIRIGVESWP--PLMMAGV-RFLIAGILLLAFLLLR-GHP-LP--T-LRQWLNAALIGLLL 78 (292)
T ss_pred HHHHHHHHHHHHHh-hHHHHHHHHhccCC--HHHHHHH-HHHHHHHHHHHHHHHh-CCC-CC--c-HHHHHHHHHHHHHH
Confidence 35566777778888 79999999888774 6677776 3332 22223322222 111 11 1 11123456678776
Q ss_pred -HHHHHHHHHhh-ccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchH
Q 014092 172 -ALGVASGMAAA-AMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLW 249 (431)
Q Consensus 172 -~~~~~l~~~g~-~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig 249 (431)
...+.+.+++. .+++++..+++..+.++++++++.+ +|||++++|++|++++++|+.++..++.. + ....|
T Consensus 79 ~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~-~-----~~~~G 151 (292)
T PRK11272 79 LAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL-S-----GNPWG 151 (292)
T ss_pred HHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc-c-----cchHH
Confidence 45677888888 8999999999999999999999986 69999999999999999999877543221 1 13468
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHH-HHhhhccCCCCCCCchHhHhhhhHh
Q 014092 250 PSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLF-LPFLSNLKGIPFAELPLYLKSGAGC 328 (431)
Q Consensus 250 ~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~ll-Lpi~~~~~g~~~~~~~~~~~~g~~c 328 (431)
+++.++|++++|+.+++.|+. + ++ ++...++ +|..++.+. ++... ..+.+....++
T Consensus 152 ~l~~l~a~~~~a~~~~~~~~~--------~-~~-~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~-------- 208 (292)
T PRK11272 152 AILILIASASWAFGSVWSSRL--------P-LP-VGMMAGA----AEMLAAGVVLLIASL-LSGERLTALPT-------- 208 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--------C-CC-cchHHHH----HHHHHHHHHHHHHHH-HcCCcccccCC--------
Confidence 999999999999999998851 1 11 2222334 666665443 33332 21111111000
Q ss_pred hhccCCCCCCCCCccHHHHHHHH--HHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHH
Q 014092 329 LLNLGANTSGCNGAPLLPLLYIA--TNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLF 406 (431)
Q Consensus 329 ~~g~~~~~~~c~~a~~~~llyl~--~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~li 406 (431)
......++|+. .....+..+...+|+.++...++.. +..|+.+.+++..+ .||++++.+++
T Consensus 209 ------------~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~-~l~Pi~a~i~~~~~----l~E~~t~~~ii 271 (292)
T PRK11272 209 ------------LSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYA-YVNPVVAVLLGTGL----GGETLSPIEWL 271 (292)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHH-HHHHHHHHHHHHHH----cCCCCcHHHHH
Confidence 00111222322 2223334556677888888888865 67799999988655 49999999999
Q ss_pred HHHHHHhhheeecCCCCC
Q 014092 407 GSVILLLGLTLYNLPQPA 424 (431)
Q Consensus 407 G~~lI~~Gv~lYn~~~~~ 424 (431)
|.++++.|+++.+..+++
T Consensus 272 G~~lIi~gv~~~~~~~~~ 289 (292)
T PRK11272 272 ALGVIVFAVVLVTLGKYL 289 (292)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999998765543
No 11
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.78 E-value=1.2e-16 Score=158.40 Aligned_cols=274 Identities=14% Similarity=0.049 Sum_probs=175.2
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHH-HHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHHHHH
Q 014092 95 IIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQI-TTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLEAL 173 (431)
Q Consensus 95 i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l-~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld~~ 173 (431)
.+.++..+++|| .|++..|...++++ |+.++.+ +.++. ++..+ +.+.+ + .++ .+++..+.+.+...
T Consensus 6 ~l~~l~a~~~Wg-~~~~~~k~~~~~~~--P~~~~~~R~~~a~-l~l~~--~~~~~-----~-~~~-~~~~~~~~~~l~~~ 72 (295)
T PRK11689 6 TLIGLIAILLWS-TMVGLIRGVSESLG--PVGGAAMIYSVSG-LLLLL--TVGFP-----R-LRQ-FPKRYLLAGGLLFV 72 (295)
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHccCC--hHHHHHHHHHHHH-HHHHH--Hcccc-----c-ccc-ccHHHHHHHhHHHH
Confidence 445778888888 89999999998874 8888888 22332 22221 11111 1 111 12345556555544
Q ss_pred -HHHHHHHhh----ccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCC-Cc---ccc
Q 014092 174 -GVASGMAAA----AMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSG-QM---LSR 244 (431)
Q Consensus 174 -~~~l~~~g~----~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~-~~---~~~ 244 (431)
.+.+.+.|. .++++...+++..+.++++++++++++|||++++|++|++++++|++++..++.+.+ .+ ...
T Consensus 73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~ 152 (295)
T PRK11689 73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIA 152 (295)
T ss_pred HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccc
Confidence 444555554 356778889999999999999999999999999999999999999988875432110 00 001
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhh
Q 014092 245 VDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKS 324 (431)
Q Consensus 245 ~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~ 324 (431)
....|+++.++|++++|+.+++.|+. + ++.|+... ++...+..+++... .++.+..+.
T Consensus 153 ~~~~G~~~~l~aa~~~A~~~v~~k~~--------~-~~~~~~~~------~~~~~~~~l~~~~~-~~~~~~~~~------ 210 (295)
T PRK11689 153 SNPLSYGLAFIGAFIWAAYCNVTRKY--------A-RGKNGITL------FFILTALALWIKYF-LSPQPAMVF------ 210 (295)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhhc--------c-CCCCchhH------HHHHHHHHHHHHHH-HhcCccccC------
Confidence 23569999999999999999999862 1 23454422 12222222222221 111100000
Q ss_pred hhHhhhccCCCCCCCCCccHHHHHHHHH-HHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHH
Q 014092 325 GAGCLLNLGANTSGCNGAPLLPLLYIAT-NMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPF 403 (431)
Q Consensus 325 g~~c~~g~~~~~~~c~~a~~~~llyl~~-~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~ 403 (431)
+...+..++|... ....+.++...+|+.++...+... ...|+++.+++..+ .||++++.
T Consensus 211 ---------------~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~-~l~Pv~a~i~~~~~----lgE~~~~~ 270 (295)
T PRK11689 211 ---------------SLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATAS-YFTPVLSAALAALL----LSTPLSFS 270 (295)
T ss_pred ---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHH-HhHHHHHHHHHHHH----hCCCCcHH
Confidence 0011122233222 223344556778888999999865 67799999998765 49999999
Q ss_pred HHHHHHHHHhhheeecCCCC
Q 014092 404 FLFGSVILLLGLTLYNLPQP 423 (431)
Q Consensus 404 ~liG~~lI~~Gv~lYn~~~~ 423 (431)
+++|.++++.|+++....++
T Consensus 271 ~~iG~~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 271 FWQGVAMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHHHHHHHhHHHHhhhHh
Confidence 99999999999977755443
No 12
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.78 E-value=9.4e-17 Score=159.39 Aligned_cols=277 Identities=20% Similarity=0.251 Sum_probs=174.9
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHHH-HHHHHHHHHHHhccccccccccCCCchhhHHHHHHHHH
Q 014092 96 IISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGYV-VIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLEALG 174 (431)
Q Consensus 96 ~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~-ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld~~~ 174 (431)
+..+++.++|| .|.+..|...++++ |+..+.+ ++... +.... +.+++ +.+++.....|++....
T Consensus 7 l~~l~~~~~Wg-~~~~~~k~~~~~~~--p~~~~~~-R~~~a~~~l~~--~~~~~---------~~~~~~~~~~g~~~~~~ 71 (299)
T PRK11453 7 VLALLVVVVWG-LNFVVIKVGLHNMP--PLMLAGL-RFMLVAFPAIF--FVARP---------KVPLNLLLGYGLTISFG 71 (299)
T ss_pred HHHHHHHHHHh-hhHHHHHHHHhcCC--HHHHHHH-HHHHHHHHHHH--HhcCC---------CCchHHHHHHHHHHHHH
Confidence 34677788888 89999999998774 7777777 44321 11111 11111 11223344557765544
Q ss_pred HH-HHHHhhcc-CCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchHHHH
Q 014092 175 VA-SGMAAAAM-LPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLWPSM 252 (431)
Q Consensus 175 ~~-l~~~g~~~-~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig~~l 252 (431)
++ +.+.+..+ .+++..+++.++.++++++++++++|||++++|++|++++++|+.++..++.+.. +....|+++
T Consensus 72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~----~~~~~G~~l 147 (299)
T PRK11453 72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQ----HVAMLGFML 147 (299)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCc----chhHHHHHH
Confidence 43 55667776 5888999999999999999999999999999999999999999988774322211 113569999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHH-HHHhhhccCCCCCCCchHhHhhhhHhhhc
Q 014092 253 MIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLL-FLPFLSNLKGIPFAELPLYLKSGAGCLLN 331 (431)
Q Consensus 253 illA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~l-lLpi~~~~~g~~~~~~~~~~~~g~~c~~g 331 (431)
.++|++++|+.+++.++.-+++ ...+....+. ++.+.+.+ ++......++ + ..... .+
T Consensus 148 ~l~aal~~a~~~v~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~-~~~~~----~~----- 206 (299)
T PRK11453 148 TLAAAFSWACGNIFNKKIMSHS------TRPAVMSLVV----WSALIPIIPFFVASLILDG-S-ATMIH----SL----- 206 (299)
T ss_pred HHHHHHHHHHHHHHHHHHhccc------CccchhHHHH----HHHHHHHHHHHHHHHHhcC-c-hhhhh----hh-----
Confidence 9999999999999988632211 1122222223 44444322 1111111222 0 00000 00
Q ss_pred cCCCCCCCCCccHHHHHHHH---HHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHH
Q 014092 332 LGANTSGCNGAPLLPLLYIA---TNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGS 408 (431)
Q Consensus 332 ~~~~~~~c~~a~~~~llyl~---~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~ 408 (431)
. .-+...+..++|+. +.+.|. .+...+|+.++...+... ...|+.+.+++..+ .||++++.+++|.
T Consensus 207 -~----~~~~~~~~~l~~l~i~~t~~~~~-l~~~~l~~~~a~~~s~~~-~l~Pv~a~~~~~l~----lgE~~~~~~~iG~ 275 (299)
T PRK11453 207 -V----TIDMTTILSLMYLAFVATIVGYG-IWGTLLGRYETWRVAPLS-LLVPVVGLASAALL----LDERLTGLQFLGA 275 (299)
T ss_pred -c----cCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCHHHHHHHH-HHHHHHHHHHHHHH----hCCCccHHHHHHH
Confidence 0 00011222344433 223333 445566777888877754 57799999998655 4999999999999
Q ss_pred HHHHhhheeecCCCC
Q 014092 409 VILLLGLTLYNLPQP 423 (431)
Q Consensus 409 ~lI~~Gv~lYn~~~~ 423 (431)
++++.|+++-..+++
T Consensus 276 ~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 276 VLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHhcchh
Confidence 999999998766655
No 13
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.72 E-value=2.1e-15 Score=145.54 Aligned_cols=256 Identities=15% Similarity=0.168 Sum_probs=167.5
Q ss_pred hhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHHH-HHHHHHHHHhhc
Q 014092 105 LAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLE-ALGVASGMAAAA 183 (431)
Q Consensus 105 ~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld-~~~~~l~~~g~~ 183 (431)
|| .+.+..|...+... |.+...+.++....+...... +++ .+ +.+++++++.|.+. .+.+.+.+.|..
T Consensus 1 Wg-~~~~~~k~~~~~~~--~~~~~~~~r~~~~~l~l~~~~-~~~---~~----~~~~~~~~~~~~~~~~l~~~~~~~a~~ 69 (260)
T TIGR00950 1 WG-TTGVVIGQYLEGQV--PLYFAVFRRLIFALLLLLPLL-RRR---PP----LKRLLRLLLLGALQIGVFYVLYFVAVK 69 (260)
T ss_pred Cc-chHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHH-Hhc---cC----HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56 78899999887632 334444433332122221111 211 01 11223466666665 667789999999
Q ss_pred cCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchHHHHHHHHHHHHHHH
Q 014092 184 MLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLWPSMMIASSAFQAGA 263 (431)
Q Consensus 184 ~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig~~lillA~i~~A~s 263 (431)
+++++...++.++.++++++++.+++|||++++|++|++++++|+.++..++.. + ....|+.+.++|++++|+.
T Consensus 70 ~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~-~-----~~~~G~~~~l~a~~~~a~~ 143 (260)
T TIGR00950 70 RLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL-S-----INPAGLLLGLGSGISFALG 143 (260)
T ss_pred hcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc-c-----ccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999887644321 1 1457899999999999999
Q ss_pred HHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHH-HHHhhhccCCCCCCCchHhHhhhhHhhhccCCCCCCCCCc
Q 014092 264 SIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLL-FLPFLSNLKGIPFAELPLYLKSGAGCLLNLGANTSGCNGA 342 (431)
Q Consensus 264 ~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~l-lLpi~~~~~g~~~~~~~~~~~~g~~c~~g~~~~~~~c~~a 342 (431)
+++.++..+ +.+.+....+. ++..++.+ ++|.....+. +. .. +. .
T Consensus 144 ~~~~k~~~~-------~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~-~~-~~-----~~----------------~ 189 (260)
T TIGR00950 144 TVLYKRLVK-------KEGPELLQFTG----WVLLLGALLLLPFAWFLGP-NP-QA-----LS----------------L 189 (260)
T ss_pred HHHHhHHhh-------cCCchHHHHHH----HHHHHHHHHHHHHHHhcCC-CC-Cc-----ch----------------H
Confidence 999886332 11222333443 34444433 3344332211 10 10 00 0
Q ss_pred cHHHHHHHH--HHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHhhhe
Q 014092 343 PLLPLLYIA--TNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLLGLT 416 (431)
Q Consensus 343 ~~~~llyl~--~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~Gv~ 416 (431)
....++++. .....+..+...+|+.++...+... ...|+.+.+++..+ .+|++++.+++|.++++.|+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~-~~~pv~~~ll~~~~----~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 190 QWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA-LAEPLVALLLGLLI----LGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH-HHHHHHHHHHHHHH----hCCCCCHHHHHHHHHHHHhcC
Confidence 111122222 2233444556778899998888865 56699999988655 499999999999999999974
No 14
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.71 E-value=1.6e-15 Score=150.48 Aligned_cols=279 Identities=9% Similarity=0.043 Sum_probs=169.9
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHH-HHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHH
Q 014092 92 SQIIIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQI-TTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGML 170 (431)
Q Consensus 92 ~~~i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l-~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iigll 170 (431)
...++..++..++|| .+.+..|.. .+.+ |.-+... +.++.+++ ..+.+.+.+....+++.++.+.+...+.+.+
T Consensus 7 ~~g~~~~l~a~~~wg-~~~~~~k~~-~~~~--~~~~~~~R~~~a~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (296)
T PRK15430 7 RQGVLLALAAYFIWG-IAPAYFKLI-YYVP--ADEILTHRVIWSFFFM-VVLMSICRQWSYLKTLIQTPQKIFMLAVSAV 81 (296)
T ss_pred hhHHHHHHHHHHHHH-HHHHHHHHh-cCCC--HHHHHHHHHHHHHHHH-HHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence 355666778888888 777777986 4443 6655555 33333222 2222222110000000001111122334444
Q ss_pred -HHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchH
Q 014092 171 -EALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLW 249 (431)
Q Consensus 171 -d~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig 249 (431)
-..++.+.+.|..++|++..+++..+.++++++++++++|||.+++||+|++++++|++++..++++ .
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~--------~--- 150 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGS--------L--- 150 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCC--------c---
Confidence 4667889999999999999999999999999999999999999999999999999999987643211 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhhHhh
Q 014092 250 PSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGAGCL 329 (431)
Q Consensus 250 ~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~~c~ 329 (431)
..+.++|++++|+.+++.|+.- ++...+.. ....++..++.+.+.... +. +..+.. .+.+
T Consensus 151 ~~~~l~aa~~~a~~~i~~r~~~-------~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~-~~~~~~---~~~~--- 210 (296)
T PRK15430 151 PIIALGLAFSFAFYGLVRKKIA-------VEAQTGML----IETMWLLPVAAIYLFAIA--DS-STSHMG---QNPM--- 210 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHhcC-------CCCchhHH----HHHHHHHHHHHHHHHHHc--cC-Cccccc---CCcH---
Confidence 1457779999999999988511 11111111 122345544433211111 10 000000 0000
Q ss_pred hccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHH
Q 014092 330 LNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSV 409 (431)
Q Consensus 330 ~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~ 409 (431)
.....++..-+ .....+.++....|+.++...++.. +..|+.+.+++..+ .||++++.+++|.+
T Consensus 211 ----------~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~-~l~Pv~a~~~g~l~----l~E~~~~~~~~G~~ 274 (296)
T PRK15430 211 ----------SLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQ-YIGPTLMFLLAVTF----YGEKPGADKMVTFA 274 (296)
T ss_pred ----------HHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHH-HHHHHHHHHHHHHH----HcCCCCHHHHHHHH
Confidence 00011111112 2223444567788999999999975 67799999888654 49999999999999
Q ss_pred HHHhhheeecCCC
Q 014092 410 ILLLGLTLYNLPQ 422 (431)
Q Consensus 410 lI~~Gv~lYn~~~ 422 (431)
+++.|+.++....
T Consensus 275 lI~~~~~v~~~~~ 287 (296)
T PRK15430 275 FIWVALAIFVMDA 287 (296)
T ss_pred HHHHHHHHHHHHH
Confidence 9988888776554
No 15
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.65 E-value=8.7e-14 Score=137.83 Aligned_cols=273 Identities=14% Similarity=0.036 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHH-HHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHHH
Q 014092 93 QIIIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQI-TTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLE 171 (431)
Q Consensus 93 ~~i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l-~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld 171 (431)
..+.++++.++.|+ .+.++.|...++++ |+.+..+ +.++. ++...+ ..+.+ .+.+++ .++..+..|++.
T Consensus 12 ~~~~~~~la~~~~~-~~~~~~K~~~~~~~--~~~~~~~R~~~a~-l~l~~~-~~~~~-~~~~~~----~~~~~~~~g~~~ 81 (293)
T PRK10532 12 LPILLLLIAMASIQ-SGASLAKSLFPLVG--APGVTALRLALGT-LILIAI-FKPWR-LRFAKE----QRLPLLFYGVSL 81 (293)
T ss_pred hHHHHHHHHHHHHH-hhHHHHHHHHHHcC--HHHHHHHHHHHHH-HHHHHH-HhHHh-ccCCHH----HHHHHHHHHHHH
Confidence 44667888888888 77778999998764 6676666 33332 222222 11111 111111 123455678888
Q ss_pred HHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchHHH
Q 014092 172 ALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLWPS 251 (431)
Q Consensus 172 ~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig~~ 251 (431)
...+.+.+++..++|.+...++..+.++++++++. ||... +.++.++++|+.++...+.+.+ +....|++
T Consensus 82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~----~~~~~G~l 151 (293)
T PRK10532 82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVS----HVDLTGAA 151 (293)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCcc----cCChHHHH
Confidence 77888899999999999999999999999998873 55544 4566788999888764332211 11356999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHH-HHHhhhccCCCCCCCchHhHhhhhHhhh
Q 014092 252 MMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLL-FLPFLSNLKGIPFAELPLYLKSGAGCLL 330 (431)
Q Consensus 252 lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~l-lLpi~~~~~g~~~~~~~~~~~~g~~c~~ 330 (431)
+.++|++++|+.+++-++.- ++.++... . ++.+++.+ ++|.....++ +.. .+
T Consensus 152 l~l~aa~~~a~~~v~~r~~~---------~~~~~~~~-~----~~~~~~~~~l~~~~~~~~~----~~~---~~------ 204 (293)
T PRK10532 152 LALGAGACWAIYILSGQRAG---------AEHGPATV-A----IGSLIAALIFVPIGALQAG----EAL---WH------ 204 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHh---------ccCCchHH-H----HHHHHHHHHHHHHHHHccC----ccc---CC------
Confidence 99999999999999977522 23444332 3 33344332 3444321111 000 00
Q ss_pred ccCCCCCCCCCccHHHHHHHH--HHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHH
Q 014092 331 NLGANTSGCNGAPLLPLLYIA--TNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGS 408 (431)
Q Consensus 331 g~~~~~~~c~~a~~~~llyl~--~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~ 408 (431)
.......+|+. .....+..+...+|+.++...++.. ...|+++.+++..+ .||++++.+++|.
T Consensus 205 ----------~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~-~l~Pv~a~l~~~l~----lgE~~~~~~~iG~ 269 (293)
T PRK10532 205 ----------WSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLM-SMEPALAAVSGMIF----LGETLTLIQWLAL 269 (293)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHH-HhHHHHHHHHHHHH----hCCCCcHHHHHHH
Confidence 00011122322 2333444556788899999999875 67799999998765 4999999999999
Q ss_pred HHHHhhheeecCCCCCccc
Q 014092 409 VILLLGLTLYNLPQPAKRS 427 (431)
Q Consensus 409 ~lI~~Gv~lYn~~~~~~~~ 427 (431)
++++.|++.+....+++.+
T Consensus 270 ~lIl~~~~~~~~~~~~~~~ 288 (293)
T PRK10532 270 GAIIAASMGSTLTIRREPK 288 (293)
T ss_pred HHHHHHHHHHHhcCCCCCC
Confidence 9999999999777655433
No 16
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.65 E-value=4e-16 Score=149.19 Aligned_cols=233 Identities=16% Similarity=0.213 Sum_probs=160.0
Q ss_pred ccCCCchhhHH-HHHH---HHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEe
Q 014092 157 ISLPKYRFLFI-GMLE---ALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAV 232 (431)
Q Consensus 157 ~~~p~~~~~ii-glld---~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~ 232 (431)
.+.|.+.++++ +++. +++|+.+.+. +|.+++.|+|+....-+|.++++++||||+.+|+.+++++.+|++++.
T Consensus 60 ~kiplk~Y~i~V~mFF~vnv~NN~al~f~---I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcT 136 (330)
T KOG1583|consen 60 PKIPLKDYAITVAMFFIVNVTNNYALKFN---IPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICT 136 (330)
T ss_pred CCCchhhhheehheeeeeeeeccceeeec---ccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEE
Confidence 45666666554 4443 5566655554 899999999999999999999999999999999999999999999985
Q ss_pred ccC-CC---------CCCcccc--ccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHH
Q 014092 233 ASG-SN---------SGQMLSR--VDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFV 300 (431)
Q Consensus 233 ~s~-~~---------~~~~~~~--~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g 300 (431)
... .+ .+++.++ .-.+|+.+..+|.+..|..++|||..|+||+|+.+ ...+ |...+
T Consensus 137 l~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~---EalF--------ytH~L- 204 (330)
T KOG1583|consen 137 LFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWK---EALF--------YTHFL- 204 (330)
T ss_pred eecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH---HHHH--------HHHHh-
Confidence 421 11 1111111 12467889999999999999999999999987653 3333 34433
Q ss_pred HHHHHhhhccCCCCCCCchHhHhhhhHhhhccCC-CCCCCCCccHHHHHHHHHHHHHHHHHH----HHhcccchHHHHHH
Q 014092 301 LLFLPFLSNLKGIPFAELPLYLKSGAGCLLNLGA-NTSGCNGAPLLPLLYIATNMAFNISML----RLMKISSAVVSSLV 375 (431)
Q Consensus 301 ~llLpi~~~~~g~~~~~~~~~~~~g~~c~~g~~~-~~~~c~~a~~~~llyl~~~~~~n~~~~----~l~k~~sA~~~sl~ 375 (431)
-+|.+..+. +|+.+ .|........ .++..+..-...+.|+.+|...+..|. .+..+-++.+.+++
T Consensus 205 --sLP~Flf~~----~div~----~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlv 274 (330)
T KOG1583|consen 205 --SLPLFLFMG----DDIVS----HWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLV 274 (330)
T ss_pred --ccchHHHhc----chHHH----HHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEe
Confidence 455554432 33332 2222221111 112222222346789999998888874 35566677777776
Q ss_pred HHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHhhheeec
Q 014092 376 VMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLLGLTLYN 419 (431)
Q Consensus 376 ~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~Gv~lYn 419 (431)
.++| =....++|+.. ..++++++.++|.++|..|.++|.
T Consensus 275 ltlR-KFvSLl~Siiy----F~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 275 LTLR-KFVSLLFSIIY----FENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred eeHH-HHHHHhheeeE----ecCCCCHHHHHHHHHHHHHHHHHH
Confidence 6666 34555566543 389999999999999999999994
No 17
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.60 E-value=1.2e-14 Score=144.69 Aligned_cols=293 Identities=19% Similarity=0.246 Sum_probs=199.3
Q ss_pred HHHHHHHhhhhH---HHHHHHHhcc-CCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHHHHH
Q 014092 98 SSAVTVTLAIAN---RVLYKLALVP-MKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLEAL 173 (431)
Q Consensus 98 ~~~~~li~Gs~n---~v~~K~~~~~-~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld~~ 173 (431)
..+.+..|-..| .+.-|..... -+++|.+++.++.+.-.+.....-..+...+ .+-..+.+++..+-+|++...
T Consensus 18 ~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~--~~~~~~~~~~~llpl~~~~~~ 95 (316)
T KOG1441|consen 18 IGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPP--SKISSKLPLRTLLPLGLVFCI 95 (316)
T ss_pred HHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC--CccccccchHHHHHHHHHHHH
Confidence 444455555555 5666777764 4568999999955543222221111111110 011123456678888999999
Q ss_pred HHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchHHHHH
Q 014092 174 GVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLWPSMM 253 (431)
Q Consensus 174 ~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig~~li 253 (431)
+..+.+.++.++|.+..|++..+.+++|.++++++.+|++++.-+..++.+..||++....+.+ + .+.|.+..
T Consensus 96 ~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~----f---n~~G~i~a 168 (316)
T KOG1441|consen 96 SHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELS----F---NLFGFISA 168 (316)
T ss_pred HHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecccc----c---cHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998763322 1 46788999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHH-HH-HhhhccCCCCCCCchHhHhhhhHhhhc
Q 014092 254 IASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLL-FL-PFLSNLKGIPFAELPLYLKSGAGCLLN 331 (431)
Q Consensus 254 llA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~l-lL-pi~~~~~g~~~~~~~~~~~~g~~c~~g 331 (431)
+.|.+..+.++++.|+.+.+ |++++|.+.+-. ++...... ++ |.....++... + +
T Consensus 169 ~~s~~~~al~~I~~~~ll~~-----~~~~~~~~~ll~----y~ap~s~~~Ll~P~~~~~~~~~~------------~--~ 225 (316)
T KOG1441|consen 169 MISNLAFALRNILSKKLLTS-----KGESLNSMNLLY----YTAPISLIFLLIPFLDYVEGNKF------------V--G 225 (316)
T ss_pred HHHHHHHHHHHHHHHHhhhc-----cccccCchHHHH----HhhhHHHHHHhcchHhhhcccce------------e--e
Confidence 99999999999999976632 345677776665 44444322 44 65544443110 0 0
Q ss_pred cCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHH
Q 014092 332 LGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVIL 411 (431)
Q Consensus 332 ~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI 411 (431)
........+ ......--++..++|...+.++.+.||++.++...+.. ..+++.+..+ .+|++++.+..|.++-
T Consensus 226 ~~~~~~~~~--~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~-~~vi~~s~~i----F~~pvt~~n~~G~~ia 298 (316)
T KOG1441|consen 226 FLTAPWFVT--FLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKR-IVVIVVSWLI----FGNPVTFLNALGYAIA 298 (316)
T ss_pred eeccccchh--hHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceE-EEEEEeEeee----ecCCCchhhHHHHHHH
Confidence 000000111 11111111455678999999999999999999876542 3333344322 2779999999999999
Q ss_pred HhhheeecCCCCCccccc
Q 014092 412 LLGLTLYNLPQPAKRSSK 429 (431)
Q Consensus 412 ~~Gv~lYn~~~~~~~~~~ 429 (431)
++|+++|+..+.+++++|
T Consensus 299 i~Gv~~Y~~~k~~~~~~~ 316 (316)
T KOG1441|consen 299 ILGVFLYSRAKLKEKKGK 316 (316)
T ss_pred HHHHHHHHHHhhhhhccC
Confidence 999999998887766553
No 18
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.55 E-value=4.7e-13 Score=131.66 Aligned_cols=216 Identities=15% Similarity=0.035 Sum_probs=137.8
Q ss_pred chhhHH-HHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCC
Q 014092 162 YRFLFI-GMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQ 240 (431)
Q Consensus 162 ~~~~ii-glld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~ 240 (431)
+.+.+. +........+.+.|+.+.+.+..+++..+.++++++++++++|||++++||+|++++++|+.++..++....
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~- 141 (281)
T TIGR03340 63 WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQH- 141 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccccc-
Confidence 344444 455677888999999999999999999999999999999999999999999999999999988765432111
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHH-HHHHHhhhccCCCCCCCch
Q 014092 241 MLSRVDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFV-LLFLPFLSNLKGIPFAELP 319 (431)
Q Consensus 241 ~~~~~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g-~llLpi~~~~~g~~~~~~~ 319 (431)
...|..+.+++++++|+.+++.|+. .++.++.....+...++.+.+ .++.+.....+. ....
T Consensus 142 -----~~~g~~~~l~aal~~a~~~i~~k~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 204 (281)
T TIGR03340 142 -----RRKAYAWALAAALGTAIYSLSDKAA---------ALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHG---RSMF 204 (281)
T ss_pred -----chhHHHHHHHHHHHHHHhhhhcccc---------ccchhcccccHHHHHHHHHHHHHHHHHHHHHHhc---cchh
Confidence 2346678899999999999987642 112333221122122333332 111111100011 0000
Q ss_pred HhHhhhhHhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCC
Q 014092 320 LYLKSGAGCLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGAS 399 (431)
Q Consensus 320 ~~~~~g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ 399 (431)
.. .. ......+...+.. ..-+..+....|+.++...+... ...|+.+.+++..+ .||+
T Consensus 205 ~~---~~-------------~~~~~~~~~~~~s-~l~~~l~~~al~~~~a~~~~~~~-~l~pv~a~l~g~~~----lgE~ 262 (281)
T TIGR03340 205 PY---AR-------------QILPSATLGGLMI-GGAYALVLWAMTRLPVATVVALR-NTSIVFAVVLGIWF----LNER 262 (281)
T ss_pred hh---HH-------------HHHHHHHHHHHHH-HHHHHHHHHHHhhCCceEEEeec-ccHHHHHHHHHHHH----hCCC
Confidence 00 00 0001111112222 22333445666777776666644 45689988887654 4999
Q ss_pred CcHHHHHHHHHHHhhhee
Q 014092 400 LSPFFLFGSVILLLGLTL 417 (431)
Q Consensus 400 ls~~~liG~~lI~~Gv~l 417 (431)
+++.+++|.++++.|+++
T Consensus 263 ~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 263 WYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred ccHHHHHHHHHHHHhHHh
Confidence 999999999999999875
No 19
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.50 E-value=1.7e-11 Score=118.69 Aligned_cols=277 Identities=21% Similarity=0.251 Sum_probs=165.9
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHH-HHHHH
Q 014092 96 IISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGM-LEALG 174 (431)
Q Consensus 96 ~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iigl-ld~~~ 174 (431)
...++..+.|+ .+....|...+. +.|.+.....++....+.. ....+... ..+...+.+++...+.+. .....
T Consensus 10 ~~~l~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 83 (292)
T COG0697 10 LALLLWGLLWG-LSFIALKLAVES--LDPFLFAAALRFLIAALLL-LPLLLLEP--RGLRPALRPWLLLLLLALLGLALP 83 (292)
T ss_pred HHHHHHHHHHH-HHHHHHHHHhcc--cCChHHHHHHHHHHHHHHH-HHHHHhhc--ccccccccchHHHHHHHHHHHHHH
Confidence 33444446666 677777777765 2344554443333212111 11111111 001111112234445544 45667
Q ss_pred HHHHHHhhccCCccHHHHHhhhhHHHHHHHHH-HHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchHHHHH
Q 014092 175 VASGMAAAAMLPGPAIPILSQTFLVWQLGFSA-VLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLWPSMM 253 (431)
Q Consensus 175 ~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~-~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig~~li 253 (431)
..+.+.+..+++++...++..+.++++.+++. +++|||.+++++.|.+++++|++++..++...... ...|+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~----~~~g~~~~ 159 (292)
T COG0697 84 FLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGIL----SLLGLLLA 159 (292)
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhH----HHHHHHHH
Confidence 78888889999999999999999999999997 77799999999999999999999998765543210 36789999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhhHhhhccC
Q 014092 254 IASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGAGCLLNLG 333 (431)
Q Consensus 254 llA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~~c~~g~~ 333 (431)
+++++++|+.+++.|+.. +.++...... ++.+ +..++......... + .+.. ...+
T Consensus 160 l~a~~~~a~~~~~~~~~~----------~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~--~-~~~~-~~~~------- 214 (292)
T COG0697 160 LAAALLWALYTALVKRLS----------RLGPVTLALL---LQLL-LALLLLLLFFLSGF--G-APIL-SRAW------- 214 (292)
T ss_pred HHHHHHHHHHHHHHHHhc----------CCChHHHHHH---HHHH-HHHHHHHHHHhccc--c-ccCC-HHHH-------
Confidence 999999999999998532 2333323221 3333 11111111111110 0 0000 0000
Q ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHh
Q 014092 334 ANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLL 413 (431)
Q Consensus 334 ~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~ 413 (431)
........+...+++ .......++.++...+... ...|+...+++..+ .+|+++..+++|.++++.
T Consensus 215 --------~~~~~~g~~~~~i~~-~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~l~----~~e~~~~~~~~G~~li~~ 280 (292)
T COG0697 215 --------LLLLYLGVFSTGLAY-LLWYYALRLLGASLVALLS-LLEPVFAALLGVLL----LGEPLSPAQLLGAALVVL 280 (292)
T ss_pred --------HHHHHHHHHHHHHHH-HHHHHHHHhcCchHHHHHH-HHHHHHHHHHHHHH----hCCCCcHHHHHHHHHHHH
Confidence 011111112222233 3445566777777777654 45577777755443 499999999999999999
Q ss_pred hheeecCC
Q 014092 414 GLTLYNLP 421 (431)
Q Consensus 414 Gv~lYn~~ 421 (431)
|+++.+.+
T Consensus 281 g~~l~~~~ 288 (292)
T COG0697 281 GVLLASLR 288 (292)
T ss_pred HHHHHhcc
Confidence 99999877
No 20
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.48 E-value=1.2e-12 Score=130.17 Aligned_cols=228 Identities=20% Similarity=0.266 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCC-Cccccccc
Q 014092 169 MLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSG-QMLSRVDF 247 (431)
Q Consensus 169 lld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~-~~~~~~~~ 247 (431)
.+=.++|+..+-++.+|+.+...|+..+.-+||..++.++..||+++.|.+++++.+.||+++...++.+. +....+..
T Consensus 167 ~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~l 246 (416)
T KOG2765|consen 167 PLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPL 246 (416)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchh
Confidence 33377999999999999999999999999999999999999999999999999999999999976654322 11223468
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhhH
Q 014092 248 LWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGAG 327 (431)
Q Consensus 248 ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~~ 327 (431)
+|+++-++|++.||+-.+.-+|-..++ |.++|.-.+-|++|+|.+++.-..+.++-.. +.+.-++|+...
T Consensus 247 lG~llaL~sA~~YavY~vllk~~~~~e-----g~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~q---- 316 (416)
T KOG2765|consen 247 LGNLLALLSALLYAVYTVLLKRKIGDE-----GERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFELPSSTQ---- 316 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccc-----cccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCce----
Confidence 999999999999999999977533332 3467877777877877777632211111111 222223332111
Q ss_pred hhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHH
Q 014092 328 CLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFG 407 (431)
Q Consensus 328 c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG 407 (431)
....+....+...+.-++|...+. -.+..+..+.+++.+|+..++ ...+ .|...++.+++|
T Consensus 317 -------------~~~vv~~~ligtvvSDylW~~a~~-lTs~Lv~TlgmSltIPLA~~a-D~l~----k~~~~S~~~iiG 377 (416)
T KOG2765|consen 317 -------------FSLVVFNNLIGTVVSDYLWAKAVL-LTSPLVVTLGMSLTIPLAMFA-DVLI----KGKHPSALYIIG 377 (416)
T ss_pred -------------eEeeeHhhHHHHHHHHHHHHHHHH-hccchhheeeeeEeeeHHHHH-HHHH----cCCCCCHHHHHH
Confidence 111111122233333444443222 245666666667888988765 3333 488999999999
Q ss_pred HHHHHhhheeecCCCCCc
Q 014092 408 SVILLLGLTLYNLPQPAK 425 (431)
Q Consensus 408 ~~lI~~Gv~lYn~~~~~~ 425 (431)
.+.|++|.++.|...+..
T Consensus 378 si~Ifv~Fv~vn~~~~~~ 395 (416)
T KOG2765|consen 378 SIPIFVGFVIVNISSENS 395 (416)
T ss_pred HHHHHHHHhheecccccc
Confidence 999999999999886543
No 21
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.40 E-value=7.4e-11 Score=114.31 Aligned_cols=159 Identities=12% Similarity=0.065 Sum_probs=108.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHH-HHHHHHHHHHHHHHHHHhccccccccccCCCc----hhhHHHH
Q 014092 95 IIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQI-TTFGYVVIYFSILYTRYLMGIVTDEMISLPKY----RFLFIGM 169 (431)
Q Consensus 95 i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l-~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~----~~~iigl 169 (431)
+...++..++|| .+.++.|.. .++ .|..+... ..++. ++..++...+.+++..++..++.+++ ...+.|+
T Consensus 4 ~~~~i~a~~~wg-~~~~~~k~~-~~~--~~~~i~~~R~~~a~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 4 IIVSLLASFLFG-YMYYYSKLL-KPL--PATDILGHRMIWSF-PFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred HHHHHHHHHHHH-HHHHHHHHh-ccC--CHHHHHHHHHHHHH-HHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 445667777888 899999984 345 36666666 33332 22222221111100000011111111 2444577
Q ss_pred HHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchH
Q 014092 170 LEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLW 249 (431)
Q Consensus 170 ld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig 249 (431)
+......+.+.+..+++.+...++.++.++|+++++++++|||++++||+|++++++|++++..+++ + . .
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~--~--~---~--- 148 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG--S--L---P--- 148 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC--C--c---h---
Confidence 7777888999999999999999999999999999999999999999999999999999987754321 1 0 1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 014092 250 PSMMIASSAFQAGASIIKEF 269 (431)
Q Consensus 250 ~~lillA~i~~A~s~V~~E~ 269 (431)
.+.+++++++|+..++.|+
T Consensus 149 -~~~l~aa~~~a~~~i~~~~ 167 (256)
T TIGR00688 149 -WEALVLAFSFTAYGLIRKA 167 (256)
T ss_pred -HHHHHHHHHHHHHHHHHhh
Confidence 3567899999999999885
No 22
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.32 E-value=2.2e-10 Score=111.67 Aligned_cols=264 Identities=12% Similarity=0.141 Sum_probs=181.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHH
Q 014092 120 MKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLV 199 (431)
Q Consensus 120 ~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~ 199 (431)
-+++|.|+....++..+++-. .+.+.+.. +...+.|+|++..+++.+.+...+.+-++-|++=+.+.+--++..+
T Consensus 47 rF~~~~fL~~~q~l~~~~~s~--~~l~~~k~---~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmI 121 (327)
T KOG1581|consen 47 RFEHSLFLVFCQRLVALLVSY--AMLKWWKK---ELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMI 121 (327)
T ss_pred cccccHHHHHHHHHHHHHHHH--HHHhcccc---cCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhh
Confidence 367888998887776533332 23222211 1234568899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCC--CCccccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 014092 200 WQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNS--GQMLSRVDFLWPSMMIASSAFQAGASIIKEFIFDDAKKC 277 (431)
Q Consensus 200 ~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~--~~~~~~~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~ 277 (431)
=+|++..++-|+||+.++++.++++..|+.+-...+.++ ++...++++.|..|+...-+..|+-|..|+++|++|
T Consensus 122 PVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~--- 198 (327)
T KOG1581|consen 122 PVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY--- 198 (327)
T ss_pred HHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC---
Confidence 999999999999999999999999999998875433222 222335789999999999999999999999999766
Q ss_pred ccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhhHhhhccCCCCCCCCCccHHHHHHHHHHHHHH
Q 014092 278 LKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGAGCLLNLGANTSGCNGAPLLPLLYIATNMAFN 357 (431)
Q Consensus 278 lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n 357 (431)
+++.+.+.....+|..++.++- ...+|...+.+ + |....+ + .+.-..+|-.+....+
T Consensus 199 ----k~s~~~mM~~vNLf~~i~~~~~----li~qg~~~~av-~--------F~~~hp---~---~~~Di~l~s~~gavGQ 255 (327)
T KOG1581|consen 199 ----KVSSLHMMFGVNLFSAILNGTY----LILQGHLLPAV-S--------FIKEHP---D---VAFDILLYSTCGAVGQ 255 (327)
T ss_pred ----CccHhHHHHHHHHHHHHHHHHh----hhcCCCCchHH-H--------HHHcCh---h---HHHHHHHHHHhhhhhh
Confidence 3565555554444555543322 11122100000 0 000011 1 1223566777777777
Q ss_pred HHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHhhheeec
Q 014092 358 ISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLLGLTLYN 419 (431)
Q Consensus 358 ~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~Gv~lYn 419 (431)
++.++-++.-++.+...+++.|=-++..+.++. .|.++++.+..|..++..|+.+=.
T Consensus 256 ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~-----f~h~~s~~q~~g~~iVFg~i~l~~ 312 (327)
T KOG1581|consen 256 LFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIV-----FGHPLSSEQWLGVLIVFGGIFLEI 312 (327)
T ss_pred heehhhHhhcccHHHHHHHHHHHHHHHHHHHHH-----hCCccchhhccCeeeehHHHHHHH
Confidence 777665566555555555666744444443332 388999999999999999987654
No 23
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=99.25 E-value=6.4e-12 Score=107.02 Aligned_cols=74 Identities=47% Similarity=0.868 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHH-HHHHhccccccccccCCCchhhH
Q 014092 93 QIIIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSIL-YTRYLMGIVTDEMISLPKYRFLF 166 (431)
Q Consensus 93 ~~i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il-~~r~~~~~~~~~~~~~p~~~~~i 166 (431)
..++++++++++.|++|+|++|.+..++.|||||++++++++|+++|+++. +.+++++.+++|+|.+|+++|++
T Consensus 56 ~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~gyvpIffaV~lyk~y~t~~It~Emr~FPkyKFaI 130 (130)
T PF08627_consen 56 FKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTFGYVPIFFAVVLYKMYFTGDITKEMRAFPKYKFAI 130 (130)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhcccceehHHHHHHHHHHHHcCCCCHHHHhCccccccC
Confidence 778889999999999999999999999999999999999999999999986 46788899999999999999864
No 24
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.19 E-value=6.5e-09 Score=103.16 Aligned_cols=271 Identities=14% Similarity=0.056 Sum_probs=165.6
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHH----HHH
Q 014092 95 IIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFI----GML 170 (431)
Q Consensus 95 i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~ii----gll 170 (431)
++++++.+++|| .+-+..|... ..+ .+++. -+.++..++.......|.. + .+.++.... |++
T Consensus 3 ~l~~lia~~~wG-s~g~~~k~~~-g~~-~~~~~--~~~~g~l~~~~~~~~~~~~-----~----~~~~~~~~~g~l~G~~ 68 (290)
T TIGR00776 3 ILIALIPALFWG-SFVLINVKIG-GGP-YSQTL--GTTFGALILSIAIAIFVLP-----E----FWALSIFLVGLLSGAF 68 (290)
T ss_pred hHHHHHHHHHHh-hhHHHHhccC-CCH-HHHHH--HHHHHHHHHHHHHHHHhCC-----c----ccccHHHHHHHHHHHH
Confidence 566788899999 6666667554 232 12222 2344432222211122211 0 011222333 555
Q ss_pred HHHHHHHHHHhhccCCccHHHHHhh-hhHHHHHHHHHHHhcCccchhH----HHHHHHHhhheeEEeccCCCCCCccc-c
Q 014092 171 EALGVASGMAAAAMLPGPAIPILSQ-TFLVWQLGFSAVLLGKKFSVTQ----IAGCLLVATGVGVAVASGSNSGQMLS-R 244 (431)
Q Consensus 171 d~~~~~l~~~g~~~~~~~~~~IL~q-s~i~~T~llS~~fLk~r~~~~q----iiG~~lv~~GV~vv~~s~~~~~~~~~-~ 244 (431)
-..+|++.+.+..++..+....+.+ ....++.+++.+++|||.+++| ++|++++++|++++...+.++.+..+ .
T Consensus 69 w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~ 148 (290)
T TIGR00776 69 WALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEF 148 (290)
T ss_pred HHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccccccccc
Confidence 6789999999999999999988888 7778999999999999999999 99999999999888654322111000 2
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhh
Q 014092 245 VDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKS 324 (431)
Q Consensus 245 ~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~ 324 (431)
+...|+.+.++|++.+++..+.-|+ + +.|++....+.. ++++++..++.... .+..+. .++..
T Consensus 149 ~~~~Gi~~~l~sg~~y~~~~~~~~~--------~---~~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~~~--~~~~~-- 211 (290)
T TIGR00776 149 NFKKGILLLLMSTIGYLVYVVVAKA--------F---GVDGLSVLLPQA-IGMVIGGIIFNLGH-ILAKPL--KKYAI-- 211 (290)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHH--------c---CCCcceehhHHH-HHHHHHHHHHHHHH-hcccch--HHHHH--
Confidence 2356999999999999999999874 1 257776643222 33333333222111 110000 01110
Q ss_pred hhHhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhc-ccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHH
Q 014092 325 GAGCLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMK-ISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPF 403 (431)
Q Consensus 325 g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k-~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~ 403 (431)
+ ...+.-++ -..-++++..-.+ +.++...++... .-|+.+.+++..+ .+|..++.
T Consensus 212 -~-----------------~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~-~~pvia~~~~v~~----l~E~~~~~ 267 (290)
T TIGR00776 212 -L-----------------LNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQ-LGVIISTLGGILI----LGEKKTKR 267 (290)
T ss_pred -H-----------------HHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHH-HHHHHHHHHHHHH----hccCCCcc
Confidence 1 00111111 1222333333445 778888888654 4588888887654 49999998
Q ss_pred HH----HHHHHHHhhheeecC
Q 014092 404 FL----FGSVILLLGLTLYNL 420 (431)
Q Consensus 404 ~l----iG~~lI~~Gv~lYn~ 420 (431)
++ +|.++++.|+++-..
T Consensus 268 ~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 268 EMIAISVGIILIIIAANILGI 288 (290)
T ss_pred eeehhHHHHHHHHHHHHHHhc
Confidence 88 999999999987643
No 25
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.09 E-value=2.1e-09 Score=102.17 Aligned_cols=220 Identities=17% Similarity=0.090 Sum_probs=146.3
Q ss_pred hHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCcccc
Q 014092 165 LFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSR 244 (431)
Q Consensus 165 ~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~ 244 (431)
.+++.....++.+...++.+......+.. |..+..++++....+++|++..||.++.....|+..+..+...+.....+
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 45667777788888888888888888888 99999999999999999999999999988888888775433221111112
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhh
Q 014092 245 VDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKS 324 (431)
Q Consensus 245 ~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~ 324 (431)
+.+.|..+++.++.+.++.++|+|+.+++ ++.. .|...+|..+-.+...+..... .+.......
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~-------~~~~-----~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~ 145 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKD-------GDTM-----FWSRNLQLPLFGLFSTFSVLLW----SDGTLISNF 145 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccC-------CCCc-----hHHHHHHHHHHHHHHHHHHHhh----cccchhhcc
Confidence 35677888899999999999999986532 2222 3444455433221111111000 000000000
Q ss_pred hhHhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHH
Q 014092 325 GAGCLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFF 404 (431)
Q Consensus 325 g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~ 404 (431)
..+.+.+...+..+..+...+++...++|+.++++.+++.+.+. +...+.+..+ .||+++..+
T Consensus 146 ------------~~~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~-~~s~lls~~~----f~~~ls~~~ 208 (222)
T TIGR00803 146 ------------GFFIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSI-ILSTLASVRL----FDAKISSTF 208 (222)
T ss_pred ------------CcccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHH-HHHHHHHHHH----hcCCccHHH
Confidence 01222333344555556666666778999999999999887774 4444445433 499999999
Q ss_pred HHHHHHHHhhheee
Q 014092 405 LFGSVILLLGLTLY 418 (431)
Q Consensus 405 liG~~lI~~Gv~lY 418 (431)
+.|..+++.|+++|
T Consensus 209 ~~g~~lV~~~~~lY 222 (222)
T TIGR00803 209 YLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHeeeEeC
Confidence 99999999999987
No 26
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.05 E-value=2.1e-08 Score=96.53 Aligned_cols=286 Identities=15% Similarity=0.201 Sum_probs=178.8
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHhc--cCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHH
Q 014092 92 SQIIIISSAVTVTLAIANRVLYKLALV--PMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGM 169 (431)
Q Consensus 92 ~~~i~i~~~~~li~Gs~n~v~~K~~~~--~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iigl 169 (431)
|.-++++.......=..|-.+.++... .+.++-|+++..-++.|..+... . ...++.+.|..||+.+.++++
T Consensus 41 w~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~gli--e----~~~~~~k~r~iP~rtY~~la~ 114 (367)
T KOG1582|consen 41 WTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLI--E----LQLIQTKRRVIPWRTYVILAF 114 (367)
T ss_pred hhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhhe--E----EEeecccceecchhHhhhhHh
Confidence 444555544443333333344333332 36667899988866665322221 1 112344556788889999988
Q ss_pred HHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchH
Q 014092 170 LEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLW 249 (431)
Q Consensus 170 ld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig 249 (431)
+.....-+..-.+.|.+=+.|.|+.++..+=+|+-+.++-++||.+..++++.+..+|++.-...|+.....+ ..+|
T Consensus 115 ~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF---~~~G 191 (367)
T KOG1582|consen 115 LTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNF---NLIG 191 (367)
T ss_pred hhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCc---ceee
Confidence 8766666667777888889999999999999999999999999999999999999999998876665433223 4778
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHH--HHHhhhccCCCCCCCchHhHhhhhH
Q 014092 250 PSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLL--FLPFLSNLKGIPFAELPLYLKSGAG 327 (431)
Q Consensus 250 ~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~l--lLpi~~~~~g~~~~~~~~~~~~g~~ 327 (431)
.+++-.|-++.|+-.-+||+.++++ ++.+ .++.. ++.-+|++ +.|... -|.-++.+. .
T Consensus 192 v~mIsgALl~DA~iGNvQEk~m~~~----~~ss---~Emvf----ySy~iG~vflf~~mvl--Tge~f~a~~-------f 251 (367)
T KOG1582|consen 192 VMMISGALLADAVIGNVQEKAMKMN----PASS---SEMVF----YSYGIGFVFLFAPMVL--TGELFSAWT-------F 251 (367)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhC----CCCc---ceEEE----eeecccHHHHHHHHHh--cccchhhhH-------H
Confidence 8999999999999999999999877 2222 33333 22222322 333321 121111111 1
Q ss_pred hhhccCCCCCCCCCccHHHHHHHH----HHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHH
Q 014092 328 CLLNLGANTSGCNGAPLLPLLYIA----TNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPF 403 (431)
Q Consensus 328 c~~g~~~~~~~c~~a~~~~llyl~----~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~ 403 (431)
|...+.-...|.+ .-.....+...++|-.+|.++..+.+.|=-+++ ++|..+ ...++|..
T Consensus 252 -----------caehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi-~lSfll----FsKPfT~q 315 (367)
T KOG1582|consen 252 -----------CAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTI-LLSFLL----FSKPFTEQ 315 (367)
T ss_pred -----------HHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHH-HHHHHH----HcCchHHH
Confidence 1111110111111 111122233557788888887777766633333 333322 26788999
Q ss_pred HHHHHHHHHhhheeecCCC
Q 014092 404 FLFGSVILLLGLTLYNLPQ 422 (431)
Q Consensus 404 ~liG~~lI~~Gv~lYn~~~ 422 (431)
+.-|..+|+.|+++--..+
T Consensus 316 y~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 316 YVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HhhhhHHHHHHHHhhcccC
Confidence 9999999999999865444
No 27
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.01 E-value=4.2e-10 Score=107.80 Aligned_cols=218 Identities=17% Similarity=0.200 Sum_probs=130.5
Q ss_pred chhhHH-HHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccC----C
Q 014092 162 YRFLFI-GMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASG----S 236 (431)
Q Consensus 162 ~~~~ii-glld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~----~ 236 (431)
++++++ |+.-..+-+++||++.|++.+=+.++.-+.+.+|.++|+.+||||++....+|..+.+.||+++.-++ +
T Consensus 97 R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~ 176 (346)
T KOG4510|consen 97 RKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGD 176 (346)
T ss_pred EEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCC
Confidence 345555 88888899999999999999999999999999999999999999999999999999999999986432 1
Q ss_pred C--CC-CccccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHH-HHhhhccCC
Q 014092 237 N--SG-QMLSRVDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLF-LPFLSNLKG 312 (431)
Q Consensus 237 ~--~~-~~~~~~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~ll-Lpi~~~~~g 312 (431)
+ ++ ++.-+....|...-+.+.+..|.-.++-++ -||+.|...-... -.+++.+. +.....+ |
T Consensus 177 ~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~---------iGk~~h~~msvsy----f~~i~lV~s~I~~~~i-g 242 (346)
T KOG4510|consen 177 TTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRY---------IGKNAHAIMSVSY----FSLITLVVSLIGCASI-G 242 (346)
T ss_pred CccccccccccccCCchHHHHHhHhhhhhHHHHHHH---------hhccccEEEEehH----HHHHHHHHHHHHHhhc-c
Confidence 1 11 111011234555555565555444444442 3567787655442 22222211 1111111 1
Q ss_pred CCCCCchHhHhhhhHhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccC
Q 014092 313 IPFAELPLYLKSGAGCLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLP 392 (431)
Q Consensus 313 ~~~~~~~~~~~~g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~ 392 (431)
--++| .|.-.+.++.-.-++-+.++++.-.-++..-|.-.++.. ..=.++++++-+.+
T Consensus 243 --~~~lP------------------~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~-~~dvvfAf~wqv~f- 300 (346)
T KOG4510|consen 243 --AVQLP------------------HCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMT-YTDVVFAFFWQVLF- 300 (346)
T ss_pred --ceecC------------------ccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhh-HHHHHHHHHHHHHH-
Confidence 11222 122112111111122334555543333444444444432 22235555555443
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhheee
Q 014092 393 YLPEGASLSPFFLFGSVILLLGLTLY 418 (431)
Q Consensus 393 ~l~~gE~ls~~~liG~~lI~~Gv~lY 418 (431)
.++..+++.+.|.++++..++..
T Consensus 301 ---f~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 301 ---FGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred ---hcCCChHHHhhceeeeehhHHHH
Confidence 38899999999999988776654
No 28
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=98.80 E-value=8.2e-07 Score=87.01 Aligned_cols=222 Identities=14% Similarity=0.130 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCcccccc
Q 014092 167 IGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVD 246 (431)
Q Consensus 167 iglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~ 246 (431)
-|+..+.---+.++++.|++.+.+.|...+.+.|..++|.+|.=||+++.=..-+.+..+|+++....+.+- .
T Consensus 90 talata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf-------~ 162 (349)
T KOG1443|consen 90 TALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQF-------N 162 (349)
T ss_pred hhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccce-------e
Confidence 355544444478899999999999999999999999999999999999988888888888888887655432 3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhh
Q 014092 247 FLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGA 326 (431)
Q Consensus 247 ~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~ 326 (431)
+.|..++..|+.+.|+--.+.+++.++.. -.+-+|+....- .|-..+..++|.....||... ...+. .+
T Consensus 163 i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~----~~~~~P~~ti~~---l~p~M~~~Ll~~~l~fEG~~~-~~~s~---~f 231 (349)
T KOG1443|consen 163 IEGFFLVLAASLLSGLRWAFTQMLLRNQP----SAKRNPIDTIFH---LQPWMSIGLLPLSLLFEGLHL-ITSSS---IF 231 (349)
T ss_pred ehhHHHHHHHHHhhhhhHHHHHHHHhcCc----cccCCCeeeHHH---hhhHHHHHHHHHHHHHccccc-chhhh---HH
Confidence 67889999999999999999888887652 123455544432 334444457788777777211 11100 01
Q ss_pred HhhhccCCCCCCCCCccHHHHHHHHH----HHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcH
Q 014092 327 GCLLNLGANTSGCNGAPLLPLLYIAT----NMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSP 402 (431)
Q Consensus 327 ~c~~g~~~~~~~c~~a~~~~llyl~~----~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~ 402 (431)
...++ +..+.++.++.. .+...+....+..+.+..+.+++.-+. -+...+++... .++.++.
T Consensus 232 ---~~~d~------~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~K-el~tl~la~ii----~~d~ls~ 297 (349)
T KOG1443|consen 232 ---RFQDT------GLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVK-EVCTLLLAIII----LKDQLSL 297 (349)
T ss_pred ---HhcCc------cHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHH-HHHHHHHHHHH----hhcchhh
Confidence 00010 112222222221 122334446677888888888765332 22333333333 3889999
Q ss_pred HHHHHHHHHHhhheeecC
Q 014092 403 FFLFGSVILLLGLTLYNL 420 (431)
Q Consensus 403 ~~liG~~lI~~Gv~lYn~ 420 (431)
..+.|+.+...|+..|..
T Consensus 298 lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 298 LNWLGLAICLAGILLHRN 315 (349)
T ss_pred hHHHHHHHHHHHHHHhcc
Confidence 999999999999999943
No 29
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.78 E-value=1.8e-08 Score=85.98 Aligned_cols=83 Identities=14% Similarity=0.148 Sum_probs=69.1
Q ss_pred cccccCCCchhhHHHHHHH-HHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEe
Q 014092 154 DEMISLPKYRFLFIGMLEA-LGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAV 232 (431)
Q Consensus 154 ~~~~~~p~~~~~iiglld~-~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~ 232 (431)
++.++.++......|++.. .++.+.++|..+.++ ...++.++.++++++++.+++|||+++++++|++++++|++++.
T Consensus 27 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~ 105 (113)
T PF13536_consen 27 RALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIA 105 (113)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHh
Confidence 3333433444555588875 788899999999995 78899999999999999999999999999999999999999998
Q ss_pred ccCCC
Q 014092 233 ASGSN 237 (431)
Q Consensus 233 ~s~~~ 237 (431)
.++.+
T Consensus 106 ~~~~~ 110 (113)
T PF13536_consen 106 WSDLT 110 (113)
T ss_pred hhhcc
Confidence 76654
No 30
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.64 E-value=1.9e-07 Score=88.27 Aligned_cols=230 Identities=15% Similarity=0.112 Sum_probs=150.7
Q ss_pred cCCCchhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCC
Q 014092 158 SLPKYRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSN 237 (431)
Q Consensus 158 ~~p~~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~ 237 (431)
+.|-|.++.-++-..++....+-+++++|=+.+.+=....++=+|++.+++.+|+|+|+++.++++.++||++-......
T Consensus 82 ~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K 161 (337)
T KOG1580|consen 82 NTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK 161 (337)
T ss_pred CCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc
Confidence 45667788777777788888888999999998877778888889999999999999999999999999999998765321
Q ss_pred CCCccccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCC
Q 014092 238 SGQMLSRVDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAE 317 (431)
Q Consensus 238 ~~~~~~~~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~ 317 (431)
-++........|+++.++|-...++-++.||++=..|++ .| +--.+++|.|..++-. .-+.+. | +
T Consensus 162 v~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~--~g-~~MM~~~NlwStL~Lg----~g~lfT----G----E 226 (337)
T KOG1580|consen 162 VGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQR--TG-TSMMFYTNLWSTLYLG----AGLLFT----G----E 226 (337)
T ss_pred cCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhcc--Cc-hhhHHHHHHHHHHHhh----hhheeh----h----h
Confidence 111111224679999999999999999999997766631 22 2224456665443321 111111 1 2
Q ss_pred chHhHhhhhHhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCC
Q 014092 318 LPLYLKSGAGCLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEG 397 (431)
Q Consensus 318 ~~~~~~~g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~g 397 (431)
+.+. ..|..-.+ ..+.-..++.++....+.+.+.-+.+-+..+.+++.+-| -++.++.|.++ .+
T Consensus 227 lweF-----~yF~~RhP------~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTR-KfFTil~SVll----f~ 290 (337)
T KOG1580|consen 227 LWEF-----FYFVQRHP------YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTR-KFFTILISVLL----FN 290 (337)
T ss_pred HHHH-----HHHHHhcc------HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehH-HHHHHHHHHHH----hc
Confidence 2111 11111111 011112333344445555556666777887777765444 23333333322 38
Q ss_pred CCCcHHHHHHHHHHHhhheee
Q 014092 398 ASLSPFFLFGSVILLLGLTLY 418 (431)
Q Consensus 398 E~ls~~~liG~~lI~~Gv~lY 418 (431)
++++..|++|.+++..|+..=
T Consensus 291 npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 291 NPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred CcCcHHHHHHHHHHHHHhhhH
Confidence 999999999999999998764
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.63 E-value=1.4e-07 Score=79.76 Aligned_cols=121 Identities=21% Similarity=0.191 Sum_probs=85.0
Q ss_pred hhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHHH-HHHHHHHHHhhc
Q 014092 105 LAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLE-ALGVASGMAAAA 183 (431)
Q Consensus 105 ~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld-~~~~~l~~~g~~ 183 (431)
|| ...+..|...++.+ |........+...+ .+.......+.+ .++.....+...+..|.+. ..++.+.+.|..
T Consensus 3 ~a-~~~~~~k~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 3 WA-IYSVFSKKLLKKIS--PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ee-eHHHHHHHHhccCC--HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 45 67788888888753 55555553332222 222222222211 1111111123456667774 779999999999
Q ss_pred cCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEE
Q 014092 184 MLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVA 231 (431)
Q Consensus 184 ~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv 231 (431)
+++++..+++..+.++++++++++++|||++++|++|+++++.|++++
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998764
No 32
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.55 E-value=1.1e-06 Score=77.96 Aligned_cols=152 Identities=22% Similarity=0.317 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhhHh
Q 014092 249 WPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGAGC 328 (431)
Q Consensus 249 g~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~~c 328 (431)
|.++.+.|.++.|+.+++.|+.+++.. .++++.|++.+..+.+....++ ++|.....|+. +..+...+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~--~~~~~~~~~~l~~~~~~~s~~~---l~~~~~~~e~~---~~~~~~~~~~-- 70 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVS--SNSKKLNPLNLLYYNSPISFII---LLPLAFLLEGP---QLSSFFSEIF-- 70 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCHHHHHHHHHHHHHHH---HHHHHHHHhhh---hhhhHHHHhh--
Confidence 457889999999999999998886531 1235688888888666666655 44444434431 1111100000
Q ss_pred hhccCCCCCCCC-CccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHH
Q 014092 329 LLNLGANTSGCN-GAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFG 407 (431)
Q Consensus 329 ~~g~~~~~~~c~-~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG 407 (431)
. .+.. .. ......+.-.+...++|+..+.++++.|+.+.++...+..++..+ ++..+ .||++++.+++|
T Consensus 71 --~--~~~~-~~~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~-~s~~~----f~~~~t~~~~~G 140 (153)
T PF03151_consen 71 --G--EELS-SDPNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVIL-LSVIF----FGEPITPLQIIG 140 (153)
T ss_pred --h--hhhc-chHHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHH-HHhhh----cCCcCCHHHHHH
Confidence 0 0000 00 111222233344568899999999999999999998887655544 44333 389999999999
Q ss_pred HHHHHhhheeecC
Q 014092 408 SVILLLGLTLYNL 420 (431)
Q Consensus 408 ~~lI~~Gv~lYn~ 420 (431)
.++.+.|.++|++
T Consensus 141 ~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 141 IVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHheeeC
Confidence 9999999999984
No 33
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.52 E-value=2e-05 Score=78.02 Aligned_cols=286 Identities=17% Similarity=0.190 Sum_probs=171.2
Q ss_pred HHHHHHHHhhhhHHHHHHHHhccCCChhHHHHH--HHHHHHHHHHHHHHHHHHhccccccccccCC-CchhhHHHHHHHH
Q 014092 97 ISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQ--ITTFGYVVIYFSILYTRYLMGIVTDEMISLP-KYRFLFIGMLEAL 173 (431)
Q Consensus 97 i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~--l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p-~~~~~iiglld~~ 173 (431)
...+.+.+..+.-.+.-|+...... ||-.+.. .-.+.-++ ...+.+| .|.++.|..+.. .|++.-+.++...
T Consensus 15 ~sa~~Y~~sS~lm~vvNK~vls~y~-f~~~l~l~~~Q~l~s~~--~v~~lk~--~~lv~~~~l~~~~~kk~~P~~~lf~~ 89 (314)
T KOG1444|consen 15 LSALFYCLSSILMTVVNKIVLSSYN-FPMGLLLMLLQSLASVL--VVLVLKR--LGLVNFRPLDLRTAKKWFPVSLLFVG 89 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHHH--HHHHHHH--hceeecCCcChHHHHHHccHHHHHHH
Confidence 4555666666566777787776542 4444333 21222111 1111222 222333321111 1445666888888
Q ss_pred HHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchHHHHH
Q 014092 174 GVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLWPSMM 253 (431)
Q Consensus 174 ~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig~~li 253 (431)
.-+....++.|.+.+++.+++...++++++.-..|+|+|.++.-|..+....+|-.....++...+ ..|-...
T Consensus 90 ~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~-------~~gY~w~ 162 (314)
T KOG1444|consen 90 MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFN-------LRGYSWA 162 (314)
T ss_pred HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceec-------chhHHHH
Confidence 888888999999999999999999999999999999999999999999999988776654443221 2255677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhhHhhhccC
Q 014092 254 IASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGAGCLLNLG 333 (431)
Q Consensus 254 llA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~~c~~g~~ 333 (431)
...++..+.-.++.|+.. +..+.+-+.+.. |.-++..+.+++.....| |+.+... +
T Consensus 163 ~~n~~~~a~~~v~~kk~v-------d~~~l~~~~lv~----yNnl~~L~~l~~~~~~~g----e~~~l~~-------~-- 218 (314)
T KOG1444|consen 163 LANCLTTAAFVVYVKKSV-------DSANLNKFGLVF----YNNLLSLPPLLILSFITG----ELDALSL-------N-- 218 (314)
T ss_pred HHHHHHHHHHHHHHHHhh-------ccccccceeEEe----ehhHHHHHHHHHHHHHhc----chHHHHh-------h--
Confidence 788888888899987533 334455555555 444444334444433322 2211100 0
Q ss_pred CCCCCCCCccHHHHHHHHHHHH--HHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHH
Q 014092 334 ANTSGCNGAPLLPLLYIATNMA--FNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVIL 411 (431)
Q Consensus 334 ~~~~~c~~a~~~~llyl~~~~~--~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI 411 (431)
.+.|.....+..+.+.+.++ -+.+...=++..||++.+++. ..- ...+..+. .+.+|+++++.-++|..+=
T Consensus 219 --~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG-~~n-~l~t~l~~---ll~~d~~~~~~n~~gll~~ 291 (314)
T KOG1444|consen 219 --FDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVG-AKN-KLLTYLGG---LLFGDKPFTFLNVIGLLVG 291 (314)
T ss_pred --cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehh-hhh-hHHHHHHH---HhcCCceechhhhHHHHHH
Confidence 01121122223333333333 344445667888888888765 221 11111111 1124899999999999999
Q ss_pred HhhheeecCCCCCc
Q 014092 412 LLGLTLYNLPQPAK 425 (431)
Q Consensus 412 ~~Gv~lYn~~~~~~ 425 (431)
++|=++|+..+.++
T Consensus 292 ~~ggv~Y~~~~~~~ 305 (314)
T KOG1444|consen 292 FFGGVLYSYATFRK 305 (314)
T ss_pred hhhhhHHhhhhhhh
Confidence 99999999887443
No 34
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.42 E-value=5e-06 Score=71.92 Aligned_cols=130 Identities=18% Similarity=0.213 Sum_probs=89.4
Q ss_pred HHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHH-HHHHHHHHH
Q 014092 98 SSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFI-GMLEALGVA 176 (431)
Q Consensus 98 ~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~ii-glld~~~~~ 176 (431)
+++.-+.+| ...++.|+..+... |-|.+.+-++........+. ....+-....+ ...+-|.|+++ |+.-..+-.
T Consensus 8 ALLsA~fa~-L~~iF~KIGl~~vd--p~~At~IRtiVi~~~l~~v~-~~~g~~~~~~~-~~~k~~lflilSGla~glswl 82 (140)
T COG2510 8 ALLSALFAG-LTPIFAKIGLEGVD--PDFATTIRTIVILIFLLIVL-LVTGNWQAGGE-IGPKSWLFLILSGLAGGLSWL 82 (140)
T ss_pred HHHHHHHHH-HHHHHHHHhccccC--ccHHHHHHHHHHHHHHHHHH-HhcCceecccc-cCcceehhhhHHHHHHHHHHH
Confidence 333444444 78899999999885 66888875554322222111 11111111111 11122456666 544566777
Q ss_pred HHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEe
Q 014092 177 SGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAV 232 (431)
Q Consensus 177 l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~ 232 (431)
+.+.++..-+++...-++.+.+.+++++|++|||||++..+|+|+.++.+|++++.
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 88888887799988899999999999999999999999999999999999998874
No 35
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.32 E-value=0.00015 Score=71.11 Aligned_cols=272 Identities=14% Similarity=0.067 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHH--HHHHHHHHhccccccccccCCCch-hhHHHH
Q 014092 93 QIIIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIY--FSILYTRYLMGIVTDEMISLPKYR-FLFIGM 169 (431)
Q Consensus 93 ~~i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~--~~il~~r~~~~~~~~~~~~~p~~~-~~iigl 169 (431)
..++.++...++|| .--..+|.... .+ -..-..-++.....+ ......|..+ ... +.++-|+.. .+..+.
T Consensus 7 ~Gil~~l~Ay~lwG-~lp~y~kll~~-~~---~~eIlahRviwS~~~~l~ll~~~r~~~-~~~-~~~~~p~~~~~~~l~a 79 (293)
T COG2962 7 KGILLALLAYLLWG-LLPLYFKLLEP-LP---ATEILAHRVIWSFPFMLALLFLLRQWR-ELK-QLLKQPKTLLMLALTA 79 (293)
T ss_pred chhHHHHHHHHHHH-HHHHHHHHHcc-CC---HHHHHHHHHHHHHHHHHHHHHHHhhhH-HHH-HHHhCcHHHHHHHHHH
Confidence 55667999999999 66666676553 21 111111122211111 1111222111 111 122223222 233344
Q ss_pred HHHHHHH-HHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccch
Q 014092 170 LEALGVA-SGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFL 248 (431)
Q Consensus 170 ld~~~~~-l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~i 248 (431)
.....|. .+.++-.+-..--.++=.-..+.+.++++.+|+|||+++.||+++++..+||.+-.+..+ ++-
T Consensus 80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g---------~lp 150 (293)
T COG2962 80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG---------SLP 150 (293)
T ss_pred HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC---------CCc
Confidence 4444444 666665554444455556667999999999999999999999999999999998765332 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhh----ccCCCCCCCchHhHhh
Q 014092 249 WPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLS----NLKGIPFAELPLYLKS 324 (431)
Q Consensus 249 g~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~----~~~g~~~~~~~~~~~~ 324 (431)
|+.+. =++.+++-...+|+ + ++|+..=-. .|+++ ++|... ..+. -++
T Consensus 151 wval~--la~sf~~Ygl~RK~--------~---~v~a~~g~~----lE~l~---l~p~al~yl~~l~~-----~~~---- 201 (293)
T COG2962 151 WVALA--LALSFGLYGLLRKK--------L---KVDALTGLT----LETLL---LLPVALIYLLFLAD-----SGQ---- 201 (293)
T ss_pred HHHHH--HHHHHHHHHHHHHh--------c---CCchHHhHH----HHHHH---HhHHHHHHHHHHhc-----Cch----
Confidence 44433 35566777777763 2 355442222 34444 333321 1111 000
Q ss_pred hhHhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHH
Q 014092 325 GAGCLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFF 404 (431)
Q Consensus 325 g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~ 404 (431)
+...+. -....+++..-.++-+--..+ ..--|+.+=.+..+.. ..-|..-.+.++.+ .||+++..+
T Consensus 202 ----~~~~~~----~~~~~LLv~aG~vTavpL~lf-~~aa~~lpls~~G~lq-Yi~Ptl~fllav~i----~~E~~~~~~ 267 (293)
T COG2962 202 ----FLQQNA----NSLWLLLVLAGLVTAVPLLLF-AAAAKRLPLSTLGFLQ-YIEPTLMFLLAVLI----FGEPFDSDQ 267 (293)
T ss_pred ----hhhcCC----chHHHHHHHhhHHHHHHHHHH-HHHHhcCCHHHHHHHH-HHHHHHHHHHHHHH----cCCCCCHHH
Confidence 000000 000011111111111111000 1112333334444432 34465555555433 489999999
Q ss_pred HHHHHHHHhhheeecCCCC
Q 014092 405 LFGSVILLLGLTLYNLPQP 423 (431)
Q Consensus 405 liG~~lI~~Gv~lYn~~~~ 423 (431)
+.+++.|-+|+++|....-
T Consensus 268 ~~~F~~IW~aL~l~~~d~l 286 (293)
T COG2962 268 LVTFAFIWLALALFSIDGL 286 (293)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987654
No 36
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.28 E-value=3.4e-06 Score=78.10 Aligned_cols=222 Identities=15% Similarity=0.243 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccc
Q 014092 168 GMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDF 247 (431)
Q Consensus 168 glld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ 247 (431)
..+-+.+|++...++..++++..+-+.+...-|+-+++++.||+|+...|++++++.+.|++++...+..... ++
T Consensus 60 ~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~-----e~ 134 (290)
T KOG4314|consen 60 SIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD-----EI 134 (290)
T ss_pred EEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh-----hh
Confidence 3344668888899999999999999999999999999999999999999999999999999998865543222 68
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCcc-CceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhh
Q 014092 248 LWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSL-DIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGA 326 (431)
Q Consensus 248 ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~-d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~ 326 (431)
+|+...+.|+...|+--|..|+..-+. +. |.-......+++..++... -|+...+.|. +.+++.....|
T Consensus 135 iGi~~AV~SA~~aAlYKV~FK~~iGnA-------n~Gdaa~FmS~LGF~NL~~~~~-~~lIL~~T~V--E~~qsFA~~PW 204 (290)
T KOG4314|consen 135 IGIACAVGSAFMAALYKVLFKMFIGNA-------NFGDAAHFMSCLGFFNLCFISF-PALILAFTGV--EHLQSFAAAPW 204 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccC-------cchhHHHHHHHHHHHHHHHHhh-hHHHHHHhch--HHHHHHhhCCc
Confidence 999999999999998888877644221 11 2222223333344333211 1111111121 12222223334
Q ss_pred HhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHH
Q 014092 327 GCLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLF 406 (431)
Q Consensus 327 ~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~li 406 (431)
.|+-| + ..+.+++|+.-|+-.. + ......++-..+.+|.-..+ .+.+ .+-.++...++
T Consensus 205 G~l~G----------~---A~L~lAFN~~iN~Gia-L---~~PilISiG~l~~iP~Naai-DiL~----q~l~~ntl~La 262 (290)
T KOG4314|consen 205 GCLCG----------A---AGLSLAFNFLINFGIA-L---LNPILISIGMLCGIPGNAAI-DILF----QELEFNTLFLA 262 (290)
T ss_pred hhhhh----------H---HHHHHHHhhheeehhh-h---hchhhheehheecCcchhHH-HHHH----HHHHHHHHHHH
Confidence 43322 1 1234444444432211 1 12233333222334443332 1111 24456778999
Q ss_pred HHHHHHhhheeecCCCCCcc
Q 014092 407 GSVILLLGLTLYNLPQPAKR 426 (431)
Q Consensus 407 G~~lI~~Gv~lYn~~~~~~~ 426 (431)
|.+++++|.++.-.+.++.+
T Consensus 263 ~T~iI~i~FiLiiiP~d~~e 282 (290)
T KOG4314|consen 263 ATCIICIGFILIIIPEDKDE 282 (290)
T ss_pred HHHHHHHhHHheecccchhh
Confidence 99999999999887776643
No 37
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.22 E-value=5.1e-05 Score=75.86 Aligned_cols=70 Identities=27% Similarity=0.471 Sum_probs=61.8
Q ss_pred hhHHHHHH-HHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEec
Q 014092 164 FLFIGMLE-ALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVA 233 (431)
Q Consensus 164 ~~iiglld-~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~ 233 (431)
..+.|++- .++..+.+.++.+.|.++.+-+....++++++++.++||||++++.++|++++++|.++++.
T Consensus 52 ~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 52 LWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 45556554 56888888999999999999999999999999999999999999999999999999877654
No 38
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.13 E-value=6.5e-05 Score=72.37 Aligned_cols=132 Identities=17% Similarity=0.185 Sum_probs=86.5
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHH-HHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHH
Q 014092 92 SQIIIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQI-TTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGML 170 (431)
Q Consensus 92 ~~~i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l-~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iigll 170 (431)
...+.++++..+.|+ .+.+..|...++.+..+...... +.++. ++..+..+...+. ...+ ...+...+..|.+
T Consensus 127 ~~G~~~~l~a~~~~a-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~--~~~~--~~~~~~~~~~~~~ 200 (260)
T TIGR00950 127 PAGLLLGLGSGISFA-LGTVLYKRLVKKEGPELLQFTGWVLLLGA-LLLLPFAWFLGPN--PQAL--SLQWGALLYLGLI 200 (260)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHhHHhhcCCchHHHHHHHHHHHHH-HHHHHHHHhcCCC--CCcc--hHHHHHHHHHHHH
Confidence 345556777777777 56666777665544333333322 22222 2222222221110 0000 0011224556777
Q ss_pred H-HHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhhee
Q 014092 171 E-ALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVG 229 (431)
Q Consensus 171 d-~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~ 229 (431)
. ..++.+.+.+..+++++..+++..+.+++++++++++++||++..|++|++++++|+.
T Consensus 201 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 201 GTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 5 5688899999999999999999999999999999999999999999999999999973
No 39
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.93 E-value=0.0099 Score=57.49 Aligned_cols=218 Identities=11% Similarity=-0.000 Sum_probs=133.8
Q ss_pred hhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCcc
Q 014092 163 RFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQML 242 (431)
Q Consensus 163 ~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~ 242 (431)
..++.|..-..-|+++|.+...+|-++..-+--+.+...++++ .||..-.-|++ +.+.|+.+..-.+.+.+
T Consensus 73 ~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr~~d~vwva--LAvlGi~lL~p~~~~~~--- 143 (292)
T COG5006 73 ALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRRLRDFVWVA--LAVLGIWLLLPLGQSVW--- 143 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----ccchhhHHHHH--HHHHHHHhheeccCCcC---
Confidence 4667799999999999999999999988877777766555543 46555444554 56667666553332222
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHH-HHHhhhccCCCCCCCchHh
Q 014092 243 SRVDFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLL-FLPFLSNLKGIPFAELPLY 321 (431)
Q Consensus 243 ~~~~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~l-lLpi~~~~~g~~~~~~~~~ 321 (431)
+...+|..+-+.+..|||+-.+.-+| -++..|--.-.+ .+++++.+ .+|+-....|... ..++.
T Consensus 144 -~lDp~Gv~~Al~AG~~Wa~YIv~G~r---------~g~~~~g~~g~a----~gm~vAaviv~Pig~~~ag~~l-~~p~l 208 (292)
T COG5006 144 -SLDPVGVALALGAGACWALYIVLGQR---------AGRAEHGTAGVA----VGMLVAALIVLPIGAAQAGPAL-FSPSL 208 (292)
T ss_pred -cCCHHHHHHHHHHhHHHHHHHHHcch---------hcccCCCchHHH----HHHHHHHHHHhhhhhhhcchhh-cChHH
Confidence 12467999999999999999998664 232233222223 45555543 4566332112000 00111
Q ss_pred HhhhhHhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCc
Q 014092 322 LKSGAGCLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLS 401 (431)
Q Consensus 322 ~~~g~~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls 401 (431)
+-.+ ...-+.+...=+..=+.-+++.++...++..+ .-|.++-+.+..+ .||.+|
T Consensus 209 l~la--------------------LgvavlSSalPYsLEmiAL~rlp~~~F~~LlS-LePa~aAl~G~i~----L~e~ls 263 (292)
T COG5006 209 LPLA--------------------LGVAVLSSALPYSLEMIALRRLPARTFGTLLS-LEPALAALSGLIF----LGETLT 263 (292)
T ss_pred HHHH--------------------HHHHHHhcccchHHHHHHHhhCChhHHHHHHH-hhHHHHHHHHHHH----hcCCCC
Confidence 1000 00111122222223355667777777777554 4588887776554 499999
Q ss_pred HHHHHHHHHHHhhheeecCCCCCccccc
Q 014092 402 PFFLFGSVILLLGLTLYNLPQPAKRSSK 429 (431)
Q Consensus 402 ~~~liG~~lI~~Gv~lYn~~~~~~~~~~ 429 (431)
+.|+.|.+.|+.+..--....+|+.+.|
T Consensus 264 ~~qwlaI~~ViaAsaG~~lt~~~~~~~~ 291 (292)
T COG5006 264 LIQWLAIAAVIAASAGSTLTARKPAVAE 291 (292)
T ss_pred HHHHHHHHHHHHHHhccccccCCCCCCC
Confidence 9999999999999987777666655443
No 40
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.82 E-value=0.00026 Score=70.28 Aligned_cols=70 Identities=24% Similarity=0.415 Sum_probs=59.2
Q ss_pred hhHHHHHH-HHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEec
Q 014092 164 FLFIGMLE-ALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVA 233 (431)
Q Consensus 164 ~~iiglld-~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~ 233 (431)
....|++- .++...-+.++.+-|+++..-|....++.++++++++||||+++.-.+||+++++|-.+++.
T Consensus 66 ~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 66 LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 44566665 44666777777888999999999999999999999999999999999999999999665543
No 41
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.82 E-value=2.2e-06 Score=82.90 Aligned_cols=204 Identities=16% Similarity=0.197 Sum_probs=121.3
Q ss_pred HhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCCCCCccccccchHHHHHHHHHHH
Q 014092 180 AAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSNSGQMLSRVDFLWPSMMIASSAF 259 (431)
Q Consensus 180 ~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig~~lillA~i~ 259 (431)
..+.|++.+.+++=|+...+||+++++.+||+|=+..-..||.+++.|-.+-+ +.++..+..++.|.++-++|++.
T Consensus 121 lcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGv----dqE~~~~~ls~~GvifGVlaSl~ 196 (347)
T KOG1442|consen 121 LCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGV----DQEGSTGTLSWIGVIFGVLASLA 196 (347)
T ss_pred eehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecc----ccccccCccchhhhHHHHHHHHH
Confidence 34567788888888999999999999999999999999999999988876533 22212233468899999999999
Q ss_pred HHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhhHhhhccCCCCCCC
Q 014092 260 QAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGAGCLLNLGANTSGC 339 (431)
Q Consensus 260 ~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~~c~~g~~~~~~~c 339 (431)
-|+-.+|.++.. ..-+-..|.+.....++..+. ++|..-.. | ++++.. +.. +.
T Consensus 197 vAlnaiytkk~l-------~~v~~~iw~lt~ynnv~a~lL---flpll~ln-g----e~~~v~--------~~~----~l 249 (347)
T KOG1442|consen 197 VALNAIYTKKVL-------PPVGDCIWRLTAYNNVNALLL---FLPLLILN-G----EFQAVV--------GFP----HL 249 (347)
T ss_pred HHHHHHhhheec-------ccccCeehhhHHHHHHHHHHH---HHHHHHHc-c----hHHHHc--------Ccc----cc
Confidence 999999987532 222234566666556555554 45554322 1 221110 000 00
Q ss_pred CCccHHHHHHHHHHHHHHHHH--HHHhcccchHHHHHHHHhH---HHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHhh
Q 014092 340 NGAPLLPLLYIATNMAFNISM--LRLMKISSAVVSSLVVMLS---VPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLLG 414 (431)
Q Consensus 340 ~~a~~~~llyl~~~~~~n~~~--~~l~k~~sA~~~sl~~~l~---vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~G 414 (431)
....++..+.+.....|.+-+ ..=+|-.|+.+-++..+.+ =.+.++++ .+|.-+.+-+-|-.+++.|
T Consensus 250 ~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~--------y~E~ks~lwwtsn~~vLvg 321 (347)
T KOG1442|consen 250 PAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAY--------YSETKSGLWWTSNIVVLVG 321 (347)
T ss_pred hHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHH--------HHHHhhhheeeeeEEEEeh
Confidence 001112222222222222211 1222444444444432211 01223322 2777777777888899999
Q ss_pred heeecCCC
Q 014092 415 LTLYNLPQ 422 (431)
Q Consensus 415 v~lYn~~~ 422 (431)
...|.+.+
T Consensus 322 s~~YT~vk 329 (347)
T KOG1442|consen 322 SLAYTLVK 329 (347)
T ss_pred hHHHHHHH
Confidence 99998664
No 42
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.77 E-value=0.00016 Score=61.76 Aligned_cols=63 Identities=13% Similarity=0.076 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEe
Q 014092 170 LEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAV 232 (431)
Q Consensus 170 ld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~ 232 (431)
+.....++...++.+.|.+.+..+-+..++++++++++++|||++.+|++|+.++++|++++.
T Consensus 46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 346677788899999999999999899999999999999999999999999999999987653
No 43
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=97.77 E-value=0.00041 Score=71.07 Aligned_cols=67 Identities=9% Similarity=0.104 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEecc
Q 014092 168 GMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVAS 234 (431)
Q Consensus 168 glld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s 234 (431)
|+.-.+++.+.+.+..+.+++..++.....+++++++++++|+|+++..|++|++++++|+.++..+
T Consensus 263 ~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 263 AIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 5555567778889999999999999999999999999999999999999999999999999987643
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.59 E-value=0.00022 Score=70.11 Aligned_cols=67 Identities=19% Similarity=0.298 Sum_probs=59.9
Q ss_pred hhHH-HHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeE
Q 014092 164 FLFI-GMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGV 230 (431)
Q Consensus 164 ~~ii-glld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~v 230 (431)
+... ++....++.+.+.+..+.+++..+.+.+..++++.+++++++||+++..|++|++++++|+.+
T Consensus 213 ~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 213 SATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 3344 455567888999999999999999999999999999999999999999999999999999865
No 45
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.59 E-value=0.0015 Score=57.72 Aligned_cols=67 Identities=19% Similarity=0.276 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeE
Q 014092 164 FLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGV 230 (431)
Q Consensus 164 ~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~v 230 (431)
++..|++....|+..+.-..++++..+++++....+.+.++++++++|+++..|++|++++++|+++
T Consensus 84 ~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 84 LILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 3444777778888888888999999999999999999999999999999999999999999999864
No 46
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.44 E-value=0.0025 Score=63.20 Aligned_cols=69 Identities=14% Similarity=0.086 Sum_probs=61.9
Q ss_pred hHHHHHHHH-HHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEec
Q 014092 165 LFIGMLEAL-GVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVA 233 (431)
Q Consensus 165 ~iiglld~~-~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~ 233 (431)
+.+|++.+. ++.+.+.+..+++++..+++....+++++++++++++|+++..|++|++++++|++....
T Consensus 212 l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 212 LAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 456777654 666889999999999999999999999999999999999999999999999999887643
No 47
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.36 E-value=0.0021 Score=63.82 Aligned_cols=69 Identities=17% Similarity=0.102 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEec
Q 014092 165 LFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVA 233 (431)
Q Consensus 165 ~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~ 233 (431)
+..|+...+++.+.+.++.+++++..+++....+++++++++++++|+++..|++|+++++.|+.+...
T Consensus 219 ~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 219 LLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 334655566888999999999999999999999999999999999999999999999999999887654
No 48
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.12 E-value=0.0071 Score=59.83 Aligned_cols=69 Identities=9% Similarity=0.027 Sum_probs=61.6
Q ss_pred hhHHHHHH-HHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEe
Q 014092 164 FLFIGMLE-ALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAV 232 (431)
Q Consensus 164 ~~iiglld-~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~ 232 (431)
...+|++- ..++.+.+.+..+.+++..+++....+++++++++++++|+++..|++|++++++|+.+..
T Consensus 215 i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 215 LGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 44456664 5578899999999999999999999999999999999999999999999999999987753
No 49
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.10 E-value=0.011 Score=58.62 Aligned_cols=70 Identities=19% Similarity=0.248 Sum_probs=61.4
Q ss_pred hhHHHHHHH-HHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEec
Q 014092 164 FLFIGMLEA-LGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVA 233 (431)
Q Consensus 164 ~~iiglld~-~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~ 233 (431)
++.+|++-+ .++.+.+.+..+.++...+++....+++++++++++++|+++..|++|.+++++|+.+...
T Consensus 217 l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 217 LMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 445576664 4777888899999999999999999999999999999999999999999999999987654
No 50
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.03 E-value=0.011 Score=58.84 Aligned_cols=68 Identities=19% Similarity=0.218 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEE
Q 014092 164 FLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVA 231 (431)
Q Consensus 164 ~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv 231 (431)
+++..++..+++.+.+.-....++....+....--+.|+++|.++.+++++..||+|+++++.|+.+-
T Consensus 228 l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~ 295 (303)
T PF08449_consen 228 LLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY 295 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence 45557777887777777777889999999999999999999999999999999999999999998753
No 51
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.01 E-value=0.013 Score=51.38 Aligned_cols=70 Identities=17% Similarity=0.155 Sum_probs=58.0
Q ss_pred hhHHHHHH-HHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHH--HhcCccchhHHHHHHHHhhheeEEec
Q 014092 164 FLFIGMLE-ALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAV--LLGKKFSVTQIAGCLLVATGVGVAVA 233 (431)
Q Consensus 164 ~~iiglld-~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~--fLk~r~~~~qiiG~~lv~~GV~vv~~ 233 (431)
++..|+.- .++.++...++...|.+.+.-+......++++.++. ++||+++..|++|++++++|+.++..
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 35555554 668889999999999999887777776778888874 89999999999999999999998754
No 52
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=96.95 E-value=0.002 Score=54.18 Aligned_cols=61 Identities=18% Similarity=0.249 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHhhheeec
Q 014092 354 MAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLLGLTLYN 419 (431)
Q Consensus 354 ~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~Gv~lYn 419 (431)
...+.....-+|+.++...+.... ..|+...+++..+ .+|++++.+++|.++++.|+++.+
T Consensus 65 ~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~----~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 65 ALAYLLYFYALKYISASIVSILQY-LSPVFAAILGWLF----LGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred ehHHHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 344455566778888888888664 5688888887654 499999999999999999998653
No 53
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=96.89 E-value=0.015 Score=59.32 Aligned_cols=61 Identities=8% Similarity=-0.023 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeE
Q 014092 170 LEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGV 230 (431)
Q Consensus 170 ld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~v 230 (431)
+..+.|...+.+..++++..+++.+....+++.++|+++++|+++..|++|++++++|+.+
T Consensus 285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 3344444455689999999999999999999999999999999999999999999999865
No 54
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=96.82 E-value=0.011 Score=58.82 Aligned_cols=70 Identities=16% Similarity=0.118 Sum_probs=63.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhc-cCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHH----HHHHHHhhheeEEe
Q 014092 163 RFLFIGMLEALGVASGMAAAA-MLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQI----AGCLLVATGVGVAV 232 (431)
Q Consensus 163 ~~~iiglld~~~~~l~~~g~~-~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qi----iG~~lv~~GV~vv~ 232 (431)
...+.|++-..++.+.+.+.. +.+++...++.|..++.+.+++++++||+.+++|+ +|+++++.|+.++.
T Consensus 213 ~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 213 LNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 344578887888889989999 99999999999999999999999999999999999 99999999988764
No 55
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.81 E-value=0.0041 Score=53.93 Aligned_cols=71 Identities=15% Similarity=0.192 Sum_probs=61.3
Q ss_pred hhhHHHHHHHHHHHHHHHhhccCCccH-HHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEec
Q 014092 163 RFLFIGMLEALGVASGMAAAAMLPGPA-IPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVA 233 (431)
Q Consensus 163 ~~~iiglld~~~~~l~~~g~~~~~~~~-~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~ 233 (431)
+.++.-.+..++.++...++.++|.+. +.+..+..+..+++++.++++|+++..|++|+.+.++|++.+-.
T Consensus 32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 445556667778888999999998877 67778999999999999999999999999999999999988743
No 56
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=96.79 E-value=0.015 Score=57.78 Aligned_cols=67 Identities=12% Similarity=0.120 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEec
Q 014092 167 IGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVA 233 (431)
Q Consensus 167 iglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~ 233 (431)
.|+....++.+.+.+..+.+++..+++....++++.++++++++|+++..|++|++++++|+.+...
T Consensus 219 ~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 219 AGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4666677999999999999999999999999999999999999999999999999999998887654
No 57
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.59 E-value=0.0065 Score=52.04 Aligned_cols=70 Identities=13% Similarity=0.048 Sum_probs=62.2
Q ss_pred chhhHHHHHHHHHHHHHHHhhccCCccHHHHH-hhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEE
Q 014092 162 YRFLFIGMLEALGVASGMAAAAMLPGPAIPIL-SQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVA 231 (431)
Q Consensus 162 ~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL-~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv 231 (431)
++|+++=+++..+...+++.+...|.++..-+ |.....+|++.++++.+|..+++.++|++++++|+.++
T Consensus 42 ~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 46788888899999999999999999986655 79999999999988877888899999999999999886
No 58
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.54 E-value=0.016 Score=49.43 Aligned_cols=68 Identities=10% Similarity=0.041 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHHHHHHhhccCCccH-HHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEE
Q 014092 164 FLFIGMLEALGVASGMAAAAMLPGPA-IPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVA 231 (431)
Q Consensus 164 ~~iiglld~~~~~l~~~g~~~~~~~~-~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv 231 (431)
.++.-.+.....+++..++.+.|.++ +.+..+..+..+.+.++++.||+++..|++|+.+.+.|++.+
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 34455566778888899999998776 889999999999999999999999999999999999998764
No 59
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=96.54 E-value=0.018 Score=57.05 Aligned_cols=59 Identities=15% Similarity=0.048 Sum_probs=53.0
Q ss_pred HHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEe
Q 014092 174 GVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAV 232 (431)
Q Consensus 174 ~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~ 232 (431)
.+.+.+.+..++++...++.....+++++++++++++|+++..|++|.+++++|+.+..
T Consensus 234 ~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 234 YQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 33455568889999999999999999999999999999999999999999999998754
No 60
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=96.52 E-value=0.039 Score=53.11 Aligned_cols=70 Identities=27% Similarity=0.354 Sum_probs=63.0
Q ss_pred hhhHHHHHHH-HHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEe
Q 014092 163 RFLFIGMLEA-LGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAV 232 (431)
Q Consensus 163 ~~~iiglld~-~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~ 232 (431)
.+...|++.. .++++.+.+....++...+++..+.+++++++++++++|+++.+|++|+++++.|+.+..
T Consensus 216 ~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 216 LLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 3555677776 589999999999999999999999999999999999999999999999999999987764
No 61
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.41 E-value=0.014 Score=49.42 Aligned_cols=70 Identities=17% Similarity=0.114 Sum_probs=61.4
Q ss_pred chhhHHHHHHHHHHHHHHHhhccCCccH-HHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEE
Q 014092 162 YRFLFIGMLEALGVASGMAAAAMLPGPA-IPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVA 231 (431)
Q Consensus 162 ~~~~iiglld~~~~~l~~~g~~~~~~~~-~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv 231 (431)
+..++.-.+...+.+++-.++.++|.++ +.+..+..+.-+.+.+++++||+.+..|++|+.+.++|++..
T Consensus 31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 3455566667778889999999998776 899999999999999999999999999999999999998765
No 62
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.32 E-value=0.015 Score=49.59 Aligned_cols=68 Identities=19% Similarity=0.111 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHhhccCCccH-HHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEec
Q 014092 166 FIGMLEALGVASGMAAAAMLPGPA-IPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVA 233 (431)
Q Consensus 166 iiglld~~~~~l~~~g~~~~~~~~-~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~ 233 (431)
..-.+...+.++...++.+.|.+. +.+..+..+..++++++++.||++++.|++|+.+.++|++.+-.
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 334445667777788888888777 67778899999999999999999999999999999999988743
No 63
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.23 E-value=0.016 Score=49.00 Aligned_cols=67 Identities=18% Similarity=0.060 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHHhhccCCccH-HHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEE
Q 014092 165 LFIGMLEALGVASGMAAAAMLPGPA-IPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVA 231 (431)
Q Consensus 165 ~iiglld~~~~~l~~~g~~~~~~~~-~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv 231 (431)
++.-.+...+.+++..++..+|.++ +.+..+..+..+.+.+.++.||+.+..|++|+.+.++|++.+
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 3445556778888888888887766 889999999999999999999999999999999999999875
No 64
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.17 E-value=0.085 Score=49.93 Aligned_cols=67 Identities=16% Similarity=0.115 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeE
Q 014092 164 FLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGV 230 (431)
Q Consensus 164 ~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~v 230 (431)
...+.++.+.++.+..+-..+.+.....+......+++.++|.++.+++++..||+|+.+++.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 4455777888888888888888999999999999999999999999999999999999999999764
No 65
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.09 E-value=0.94 Score=44.69 Aligned_cols=101 Identities=16% Similarity=0.026 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHhhccCCccHHH-HHhhhhHHHHHHHHHHHhcCccchhHHH----HHHHHhhheeEEeccCCCCCCc-
Q 014092 168 GMLEALGVASGMAAAAMLPGPAIP-ILSQTFLVWQLGFSAVLLGKKFSVTQIA----GCLLVATGVGVAVASGSNSGQM- 241 (431)
Q Consensus 168 glld~~~~~l~~~g~~~~~~~~~~-IL~qs~i~~T~llS~~fLk~r~~~~qii----G~~lv~~GV~vv~~s~~~~~~~- 241 (431)
|++=+++|..++.+..+...+... +=.+.+.+.+.++++++++|--+..+++ ++++.++|+.+....+.+++..
T Consensus 52 G~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~ 131 (269)
T PF06800_consen 52 GAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSS 131 (269)
T ss_pred HHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 777789999999998888666644 3357889999999999999987766655 7778888988887665443321
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHH
Q 014092 242 LSRVDFLWPSMMIASSAFQAGASIIKE 268 (431)
Q Consensus 242 ~~~~~~ig~~lillA~i~~A~s~V~~E 268 (431)
...+..-|....+++.+-+-.-.+..+
T Consensus 132 ~~~~~~kgi~~Ll~stigy~~Y~~~~~ 158 (269)
T PF06800_consen 132 SKSNMKKGILALLISTIGYWIYSVIPK 158 (269)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 122345577888889888877777765
No 66
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=95.69 E-value=0.13 Score=50.67 Aligned_cols=68 Identities=18% Similarity=0.143 Sum_probs=57.7
Q ss_pred chhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHH----HHHHHHhhhee
Q 014092 162 YRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQI----AGCLLVATGVG 229 (431)
Q Consensus 162 ~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qi----iG~~lv~~GV~ 229 (431)
++=.+-|++-..+|++++++.........-.+.|+.++.+.+-+.++|||+=+++|+ +|++++++|.+
T Consensus 196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 344677999999999999999999999999999999999999999999998777765 46666666654
No 67
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=95.51 E-value=0.1 Score=49.74 Aligned_cols=74 Identities=12% Similarity=0.167 Sum_probs=61.1
Q ss_pred hhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCC
Q 014092 163 RFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGS 236 (431)
Q Consensus 163 ~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~ 236 (431)
+...+.++-+..-+-.-.+++|.+.+++.++....|+..+..-..+.|.|.+-......++.++.-++..+++.
T Consensus 70 ~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~ 143 (309)
T COG5070 70 KWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQ 143 (309)
T ss_pred hhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchh
Confidence 34566777766666667788999999999999999999999999999999999999999888887666555443
No 68
>COG2510 Predicted membrane protein [Function unknown]
Probab=95.46 E-value=0.095 Score=45.80 Aligned_cols=56 Identities=27% Similarity=0.309 Sum_probs=39.5
Q ss_pred HHHHHhcccc-hHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHhhheeecC
Q 014092 359 SMLRLMKISS-AVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLLGLTLYNL 420 (431)
Q Consensus 359 ~~~~l~k~~s-A~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~Gv~lYn~ 420 (431)
++++-+|.+. +.+.++ +... |+.+.+++..+ .||+++..+.+|.++|.+|.++...
T Consensus 83 ~Yf~ALk~G~as~VvPl-dk~s-vvl~~lls~lf----L~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 83 LYFRALKKGKASRVVPL-DKTS-VVLAVLLSILF----LGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHhcCCcceEEEc-cccc-HHHHHHHHHHH----hcCCCCHHHHHHHHHHHhCeeeEec
Confidence 3344555554 444555 5545 56666676544 4999999999999999999998754
No 69
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=95.19 E-value=0.071 Score=46.77 Aligned_cols=28 Identities=29% Similarity=0.422 Sum_probs=25.6
Q ss_pred CCCCcHHHHHHHHHHHhhheeecCCCCC
Q 014092 397 GASLSPFFLFGSVILLLGLTLYNLPQPA 424 (431)
Q Consensus 397 gE~ls~~~liG~~lI~~Gv~lYn~~~~~ 424 (431)
+|++++.+++|.++|++|+++.+.++++
T Consensus 99 ~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 99 NETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999876554
No 70
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=95.15 E-value=0.6 Score=47.51 Aligned_cols=134 Identities=16% Similarity=0.041 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccC--CCch---hhHH
Q 014092 93 QIIIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISL--PKYR---FLFI 167 (431)
Q Consensus 93 ~~i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~--p~~~---~~ii 167 (431)
..=+++++..++.| ...+..|....+.+ ..-+++.+-.++.++ ..+......+ ++.++. ++.. ++.-
T Consensus 168 ~GDll~l~~a~lya-~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii-~~iq~~ile~-----~~i~~~~w~~~~~~~~v~~ 239 (334)
T PF06027_consen 168 LGDLLALLGAILYA-VSNVLEEKLVKKAP-RVEFLGMLGLFGFII-SGIQLAILER-----SGIESIHWTSQVIGLLVGY 239 (334)
T ss_pred hhHHHHHHHHHHHH-HHHHHHHHhcccCC-HHHHHHHHHHHHHHH-HHHHHHheeh-----hhhhccCCChhhHHHHHHH
Confidence 33355677777888 55556666665443 234444444445432 2222111111 111122 2111 1112
Q ss_pred HHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEecc
Q 014092 168 GMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVAS 234 (431)
Q Consensus 168 glld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s 234 (431)
+++...-+.+.-+.+..+++....+=.-+..++++++..++.++++++..++|.+++++|+++-...
T Consensus 240 ~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 240 ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 3333445556666677788888777778899999999999999999999999999999999988653
No 71
>PRK13499 rhamnose-proton symporter; Provisional
Probab=94.79 E-value=3 Score=42.63 Aligned_cols=98 Identities=17% Similarity=0.058 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHhhccCCccH-HHHHhhhhHHHHHHHHHHHhcCcc-------chhHHHHHHHHhhheeEEecc----C
Q 014092 168 GMLEALGVASGMAAAAMLPGPA-IPILSQTFLVWQLGFSAVLLGKKF-------SVTQIAGCLLVATGVGVAVAS----G 235 (431)
Q Consensus 168 glld~~~~~l~~~g~~~~~~~~-~~IL~qs~i~~T~llS~~fLk~r~-------~~~qiiG~~lv~~GV~vv~~s----~ 235 (431)
|++=.++|..+..+..+...++ ..|-.+.+.+.+.++..++++|-- ...=.+|++++++|+++.... +
T Consensus 80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~ 159 (345)
T PRK13499 80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKE 159 (345)
T ss_pred HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 7777889999999998887777 456677889999999999987532 234577888999999988662 2
Q ss_pred CCCCC--ccccccchHHHHHHHHHHHHHHHHH
Q 014092 236 SNSGQ--MLSRVDFLWPSMMIASSAFQAGASI 265 (431)
Q Consensus 236 ~~~~~--~~~~~~~ig~~lillA~i~~A~s~V 265 (431)
.+.+. ..+.+.-.|+.+.++|.+.+++-+.
T Consensus 160 ~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~ 191 (345)
T PRK13499 160 RKMGIKKAEEFNLKKGLILAVMSGIFSACFSF 191 (345)
T ss_pred cccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence 21110 1123456788999999999988883
No 72
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.67 E-value=0.11 Score=42.68 Aligned_cols=56 Identities=16% Similarity=0.076 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhhccCCccH-HHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q 014092 169 MLEALGVASGMAAAAMLPGPA-IPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLV 224 (431)
Q Consensus 169 lld~~~~~l~~~g~~~~~~~~-~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv 224 (431)
.+...+.++...++.+.|.+. +.+..+..+..+.+.+.++.||+.+..|++|+.++
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 356677788888999998877 58889999999999999999999999999998764
No 73
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=94.63 E-value=0.22 Score=48.08 Aligned_cols=137 Identities=18% Similarity=0.079 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHH-HHhhhccCCCCCCCchHhHhhhhH
Q 014092 249 WPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLF-LPFLSNLKGIPFAELPLYLKSGAG 327 (431)
Q Consensus 249 g~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~ll-Lpi~~~~~g~~~~~~~~~~~~g~~ 327 (431)
|..+.++|+++|+...+.-|. +. ++|+..+.. +..+++.+. +++...... ..+..+..+. .
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~--------~~--~~~~~~i~~----~R~~~a~~~l~~~~~~~~~--~~~~~~~~~~-~- 64 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKL--------LK--PLPATDILG----HRMIWSFPFMLLSVTLFRQ--WAALIERLKR-I- 64 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHH--------hc--cCCHHHHHH----HHHHHHHHHHHHHHHHHcc--hHHHHHHHhC-c-
Confidence 678899999999999999773 11 478877776 555555443 333221110 0000000000 0
Q ss_pred hhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHH
Q 014092 328 CLLNLGANTSGCNGAPLLPLLYIATNMAFNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFG 407 (431)
Q Consensus 328 c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG 407 (431)
+. . .......+..+....++.+...-+++.++..+++.. ...|+...+++..+ .+|++++.++.|
T Consensus 65 -----~~----~-~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~-~~~Pi~~~lla~~~----l~Ek~~~~~~l~ 129 (256)
T TIGR00688 65 -----QK----R-PLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGY-LINPLVMVALGRVF----LKERISRFQFIA 129 (256)
T ss_pred -----cc----c-hHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHH-HHHHHHHHHHHHHH----HhcCCCHHHHHH
Confidence 00 0 001111111222334455555667888888877754 56799988887554 499999999999
Q ss_pred HHHHHhhheee
Q 014092 408 SVILLLGLTLY 418 (431)
Q Consensus 408 ~~lI~~Gv~lY 418 (431)
.++.+.|+.+.
T Consensus 130 ~~~~~~Gv~li 140 (256)
T TIGR00688 130 VIIATLGVISN 140 (256)
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 74
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.03 E-value=0.81 Score=46.87 Aligned_cols=140 Identities=13% Similarity=0.130 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhcc--CCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCc---h-hhH
Q 014092 93 QIIIISSAVTVTLAIANRVLYKLALVP--MKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKY---R-FLF 166 (431)
Q Consensus 93 ~~i~i~~~~~li~Gs~n~v~~K~~~~~--~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~---~-~~i 166 (431)
..-+++++.-++-|+....+-|...++ --+.|.|+..+--|-+++ .++.++.-...+ +|..+.|.. - +++
T Consensus 247 lG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnlll-lwP~l~iL~~~~---~e~F~lP~~~q~~~vv~ 322 (416)
T KOG2765|consen 247 LGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLL-LWPPLIILDFFG---EERFELPSSTQFSLVVF 322 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHH-HhHHHHHHHHhc---cCcccCCCCceeEeeeH
Confidence 344456677777775554444444433 123455655553333322 232222111112 222233332 2 444
Q ss_pred HHHHH-HHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCC
Q 014092 167 IGMLE-ALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGS 236 (431)
Q Consensus 167 iglld-~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~ 236 (431)
.++.+ .+..++-..|...|++-+..+=...+||..|+.=.++.++.++..+++|.+.+++|.+++-.++.
T Consensus 323 ~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 323 NNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred hhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 58777 45999999999999998888888899999999999999999999999999999999988876544
No 75
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.20 E-value=0.088 Score=50.58 Aligned_cols=75 Identities=17% Similarity=0.214 Sum_probs=65.7
Q ss_pred CchhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccC
Q 014092 161 KYRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASG 235 (431)
Q Consensus 161 ~~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~ 235 (431)
+|.+..+|++..+++.+.+.-..+-.+-.-+|...+-=+||.+.|+++.+..++.+||+|..+++.|+.+-...|
T Consensus 241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 467888899999999988888777777778888888999999999999999999999999999999988765444
No 76
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=91.98 E-value=1 Score=39.87 Aligned_cols=74 Identities=24% Similarity=0.305 Sum_probs=53.5
Q ss_pred cccCCCchhhHHHHHHHHHHHHHHHhhccCCccHHHH-HhhhhHHHHHHHHHH----HhcCccchhHHHHHHHHhhheeE
Q 014092 156 MISLPKYRFLFIGMLEALGVASGMAAAAMLPGPAIPI-LSQTFLVWQLGFSAV----LLGKKFSVTQIAGCLLVATGVGV 230 (431)
Q Consensus 156 ~~~~p~~~~~iiglld~~~~~l~~~g~~~~~~~~~~I-L~qs~i~~T~llS~~----fLk~r~~~~qiiG~~lv~~GV~v 230 (431)
.++.|||.+. -|++-+..-+...+......++...+ .-..++..++++-++ .-|++++.+|++|+++.++|+.+
T Consensus 60 ~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 60 LSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred hccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 4456766664 67777766677777777775555443 344567778888775 46788999999999999999863
No 77
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=91.92 E-value=2.8 Score=35.25 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=38.7
Q ss_pred cHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccC
Q 014092 188 PAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASG 235 (431)
Q Consensus 188 ~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~ 235 (431)
-.+.--.+..|..+.+..+..=|+|++++.|+|.+++++|+.++...+
T Consensus 59 RvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 59 RVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred hHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 344555566677788888888899999999999999999998887543
No 78
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=91.42 E-value=4 Score=39.59 Aligned_cols=59 Identities=19% Similarity=0.140 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q 014092 166 FIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLV 224 (431)
Q Consensus 166 iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv 224 (431)
++-++++.++.+.-+-.-|.+.-.=..-....++.|.++|.++.+.+++..-.+|+.++
T Consensus 186 ~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 186 IVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 34556777888777777788877788888889999999999999999999999987653
No 79
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=91.13 E-value=0.55 Score=45.73 Aligned_cols=62 Identities=19% Similarity=0.149 Sum_probs=56.7
Q ss_pred HHHH-HHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhhee
Q 014092 168 GMLE-ALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVG 229 (431)
Q Consensus 168 glld-~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~ 229 (431)
|++. ++.+.+=++++.+.|...+.+|.+.-+.+.++..+++|+|+++..||+|++.++++.+
T Consensus 216 avlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 216 AVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 6665 5588899999999999999999999999999999999999999999999999888765
No 80
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=90.38 E-value=1.2 Score=37.98 Aligned_cols=58 Identities=10% Similarity=0.132 Sum_probs=40.0
Q ss_pred HHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHhhheeec
Q 014092 357 NISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLLGLTLYN 419 (431)
Q Consensus 357 n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~Gv~lYn 419 (431)
.......+|+.+..++.-... .-++...+.+..+ .||++++.+++|.++++.|+++..
T Consensus 51 ~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~----f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 51 MVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKL----WHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHh
Confidence 334455667666665555444 3455555555443 499999999999999999997654
No 81
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=90.12 E-value=4.5 Score=34.26 Aligned_cols=49 Identities=16% Similarity=0.190 Sum_probs=41.8
Q ss_pred CccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEecc
Q 014092 186 PGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVAS 234 (431)
Q Consensus 186 ~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s 234 (431)
.+=.+.-=.+..|..+.+..+.+=|+|++++.++|..++++|+.++...
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3445666677788899999999999999999999999999999988754
No 82
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=89.82 E-value=2.7 Score=36.45 Aligned_cols=30 Identities=23% Similarity=0.198 Sum_probs=26.9
Q ss_pred CCCCCcHHHHHHHHHHHhhheeecCCCCCc
Q 014092 396 EGASLSPFFLFGSVILLLGLTLYNLPQPAK 425 (431)
Q Consensus 396 ~gE~ls~~~liG~~lI~~Gv~lYn~~~~~~ 425 (431)
.+|++++..++|.++++.|+++.|..++++
T Consensus 79 f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~ 108 (120)
T PRK10452 79 FDESLSLMKIAGLTTLVAGIVLIKSGTRKA 108 (120)
T ss_pred hCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 399999999999999999999999877554
No 83
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=89.74 E-value=0.57 Score=47.28 Aligned_cols=63 Identities=13% Similarity=0.098 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeE
Q 014092 168 GMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGV 230 (431)
Q Consensus 168 glld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~v 230 (431)
+++....|...+....++++-.+++.+...-.+..+.|+++++++.+..|.+|+++.++|+.+
T Consensus 242 sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~ 304 (316)
T KOG1441|consen 242 SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFL 304 (316)
T ss_pred HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHH
Confidence 555566777888888899999999999999999999999999999999999999999999875
No 84
>PRK02237 hypothetical protein; Provisional
Probab=88.38 E-value=7.7 Score=32.95 Aligned_cols=48 Identities=15% Similarity=0.157 Sum_probs=40.8
Q ss_pred ccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEecc
Q 014092 187 GPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVAS 234 (431)
Q Consensus 187 ~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s 234 (431)
+=.+.-=.+..|..+.+..+..=|.|++++.++|..++++|+.++...
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 445666677778888899999999999999999999999999887643
No 85
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=88.21 E-value=3.5 Score=40.92 Aligned_cols=136 Identities=16% Similarity=0.104 Sum_probs=89.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhHHHHHHHHHHHhhhccCCCCCCCchHhHhhhh
Q 014092 247 FLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGFQALFVLLFLPFLSNLKGIPFAELPLYLKSGA 326 (431)
Q Consensus 247 ~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~q~l~g~llLpi~~~~~g~~~~~~~~~~~~g~ 326 (431)
.-|.++.+.|.+.|+..-.|.+- ++ ++++.++.++--+|...+...++.... + +.++.+..++
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kl--------l~--~~~~~eIlahRviwS~~~~l~ll~~~r---~--~~~~~~~~~~-- 68 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKL--------LE--PLPATEILAHRVIWSFPFMLALLFLLR---Q--WRELKQLLKQ-- 68 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHH--------Hc--cCCHHHHHHHHHHHHHHHHHHHHHHHh---h--hHHHHHHHhC--
Confidence 45789999999999999999873 33 467777888777777766433332221 1 1122111111
Q ss_pred HhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHHH-HHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHH
Q 014092 327 GCLLNLGANTSGCNGAPLLPLLYIATNMAFNISML-RLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFL 405 (431)
Q Consensus 327 ~c~~g~~~~~~~c~~a~~~~llyl~~~~~~n~~~~-~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~l 405 (431)
...+..++.....+..|.+.+ .-.+++....+++-. +..|+..++.+..+ .+|+++..|.
T Consensus 69 --------------p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY-~InPL~~VllG~lf----lkErls~~Q~ 129 (293)
T COG2962 69 --------------PKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGY-FINPLVNVLLGRLF----LKERLSRLQW 129 (293)
T ss_pred --------------cHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHH-HHHHHHHHHHHHHH----HHhhccHHHH
Confidence 111223333334455665553 355777888889854 77899999998765 4999999999
Q ss_pred HHHHHHHhhheee
Q 014092 406 FGSVILLLGLTLY 418 (431)
Q Consensus 406 iG~~lI~~Gv~lY 418 (431)
++.++..+|+..-
T Consensus 130 iAV~lA~~GV~~~ 142 (293)
T COG2962 130 IAVGLAAAGVLIQ 142 (293)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998754
No 86
>PRK13499 rhamnose-proton symporter; Provisional
Probab=86.80 E-value=13 Score=38.17 Aligned_cols=67 Identities=9% Similarity=0.063 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHhhccCCcc----HHHHHhhhhHHHHHHHHHHHhcCccc------hhHHHHHHHHhhheeEEec
Q 014092 166 FIGMLEALGVASGMAAAAMLPGP----AIPILSQTFLVWQLGFSAVLLGKKFS------VTQIAGCLLVATGVGVAVA 233 (431)
Q Consensus 166 iiglld~~~~~l~~~g~~~~~~~----~~~IL~qs~i~~T~llS~~fLk~r~~------~~qiiG~~lv~~GV~vv~~ 233 (431)
+-|++-..++++..++....... .+.+-+|+.++++.+-.. +|||+=+ +.-++|+++.++|.+++..
T Consensus 265 l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 265 LAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 34777788999999988766333 334556999899998888 4887544 5567888888888776643
No 87
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=86.34 E-value=1.7 Score=42.85 Aligned_cols=69 Identities=13% Similarity=0.258 Sum_probs=60.9
Q ss_pred CchhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhhee
Q 014092 161 KYRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVG 229 (431)
Q Consensus 161 ~~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~ 229 (431)
++.+..+|++-..++.+..-|++.--++-.++++.+.+++..+.-.+|.++-+|++-|+|+++++...+
T Consensus 253 r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v 321 (346)
T KOG4510|consen 253 RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTV 321 (346)
T ss_pred eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHH
Confidence 355777899999999999999998888889999999999999999999999999999999877665443
No 88
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=85.87 E-value=3.1 Score=35.03 Aligned_cols=62 Identities=19% Similarity=0.259 Sum_probs=44.4
Q ss_pred HHHHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCCCCCCcHHHHHHHHHHHhhheeecCCCC
Q 014092 356 FNISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPEGASLSPFFLFGSVILLLGLTLYNLPQP 423 (431)
Q Consensus 356 ~n~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~gE~ls~~~liG~~lI~~Gv~lYn~~~~ 423 (431)
++.....-.++.++.+..+ . ...|+...+++..+ .+|+++...+.|.+++++|+++.+.+..
T Consensus 48 ~~~~~~~a~~~~~~~v~~i-~-~~~pi~~~ll~~~~----~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 48 AYLLFFYALSYAPALVAAI-F-SLSPIFTALLSWLF----FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHhCcHHHHHH-H-HHHHHHHHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 3444455556666544433 2 35688888777554 4899999999999999999998876654
No 89
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=85.78 E-value=5.8 Score=33.77 Aligned_cols=27 Identities=22% Similarity=0.357 Sum_probs=25.4
Q ss_pred CCCCcHHHHHHHHHHHhhheeecCCCC
Q 014092 397 GASLSPFFLFGSVILLLGLTLYNLPQP 423 (431)
Q Consensus 397 gE~ls~~~liG~~lI~~Gv~lYn~~~~ 423 (431)
+|++++..++|.++++.|+++.|..++
T Consensus 80 ~e~~~~~~~~gi~lIi~GVi~l~l~~~ 106 (110)
T PRK09541 80 GQRLDLPAIIGMMLICAGVLVINLLSR 106 (110)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999998765
No 90
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=85.32 E-value=5.2 Score=40.09 Aligned_cols=69 Identities=17% Similarity=0.216 Sum_probs=58.8
Q ss_pred chhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeE
Q 014092 162 YRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGV 230 (431)
Q Consensus 162 ~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~v 230 (431)
+.+++.+.|.++++++.++-...-.+-....+..+-=.+++++|.+..+.+.+..||+|+.+++.|+..
T Consensus 242 ~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 242 FDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 457778999999999988887766666677777777789999999999999999999999999988764
No 91
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=84.76 E-value=11 Score=37.85 Aligned_cols=29 Identities=14% Similarity=-0.017 Sum_probs=25.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014092 246 DFLWPSMMIASSAFQAGASIIKEFIFDDA 274 (431)
Q Consensus 246 ~~ig~~lillA~i~~A~s~V~~E~~f~~y 274 (431)
..+|..+.++|+++.|.+.++||+...+-
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~ 33 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRL 33 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57899999999999999999999866543
No 92
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.44 E-value=9.9 Score=34.27 Aligned_cols=106 Identities=22% Similarity=0.289 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHHHHHHHHHHHHHHHhhccC-CccHHHHHhhhhHHHHH
Q 014092 124 PFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFIGMLEALGVASGMAAAAML-PGPAIPILSQTFLVWQL 202 (431)
Q Consensus 124 Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~iiglld~~~~~l~~~g~~~~-~~~~~~IL~qs~i~~T~ 202 (431)
|+.-+.+.+..-.++...+.+.+.++.... ...+.|||.+ +-|++-+.--+.-....+.. .+....+.-..+.+..+
T Consensus 34 pl~As~isf~vGt~~L~~l~l~~~~~~~~a-~~~~~pwW~~-~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~gl 111 (150)
T COG3238 34 PLLASLISFLVGTVLLLILLLIKQGHPGLA-AVASAPWWAW-IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGL 111 (150)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCchh-hccCCchHHH-HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHH
Confidence 555555533333333333333343322222 2234466654 33443332222223333444 23334445555666666
Q ss_pred HHHHH----HhcCccchhHHHHHHHHhhheeEE
Q 014092 203 GFSAV----LLGKKFSVTQIAGCLLVATGVGVA 231 (431)
Q Consensus 203 llS~~----fLk~r~~~~qiiG~~lv~~GV~vv 231 (431)
++=.+ .-+|+++..+++|++++++|+.+.
T Consensus 112 liD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 112 LIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 66553 234789999999999999995544
No 93
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=77.63 E-value=69 Score=32.82 Aligned_cols=66 Identities=14% Similarity=0.071 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEe
Q 014092 167 IGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAV 232 (431)
Q Consensus 167 iglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~ 232 (431)
+=+.++.++.+.-+=.-|.+.-+-..-.+..++++.+.|+.+.+.+++..=.+|+.+++..+.+=.
T Consensus 256 vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~ 321 (345)
T KOG2234|consen 256 VVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYS 321 (345)
T ss_pred HHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhh
Confidence 355566666666555566666666666677899999999989999999999999999988877654
No 94
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=76.70 E-value=18 Score=30.77 Aligned_cols=27 Identities=33% Similarity=0.400 Sum_probs=24.4
Q ss_pred CCCCCcHHHHHHHHHHHhhheeecCCC
Q 014092 396 EGASLSPFFLFGSVILLLGLTLYNLPQ 422 (431)
Q Consensus 396 ~gE~ls~~~liG~~lI~~Gv~lYn~~~ 422 (431)
.+|++++..++|..++++|++.-|...
T Consensus 79 f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 79 FGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred cCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 399999999999999999999888654
No 95
>PRK11431 multidrug efflux system protein; Provisional
Probab=72.60 E-value=27 Score=29.49 Aligned_cols=26 Identities=27% Similarity=0.413 Sum_probs=23.8
Q ss_pred CCCCcHHHHHHHHHHHhhheeecCCC
Q 014092 397 GASLSPFFLFGSVILLLGLTLYNLPQ 422 (431)
Q Consensus 397 gE~ls~~~liG~~lI~~Gv~lYn~~~ 422 (431)
+|++++..++|.++++.|++.-|..+
T Consensus 79 ~e~~~~~~~~gi~lIi~GVv~l~l~~ 104 (105)
T PRK11431 79 GESASPARLLSLALIVAGIIGLKLST 104 (105)
T ss_pred CCCCCHHHHHHHHHHHHHHHhhhccC
Confidence 99999999999999999999887653
No 96
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=70.33 E-value=30 Score=29.40 Aligned_cols=24 Identities=33% Similarity=0.498 Sum_probs=22.2
Q ss_pred CCCCcHHHHHHHHHHHhhheeecC
Q 014092 397 GASLSPFFLFGSVILLLGLTLYNL 420 (431)
Q Consensus 397 gE~ls~~~liG~~lI~~Gv~lYn~ 420 (431)
+|++++..++|.++++.|++.-|.
T Consensus 85 ~e~~~~~~~~gi~lIi~GVi~lkl 108 (109)
T PRK10650 85 GQRLNRKGWIGLVLLLAGMVMIKL 108 (109)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999987653
No 97
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=69.76 E-value=6.2 Score=33.44 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=56.4
Q ss_pred chhhHHHHHHHHHHHHHHHhhccCCccHHH-HHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEe
Q 014092 162 YRFLFIGMLEALGVASGMAAAAMLPGPAIP-ILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAV 232 (431)
Q Consensus 162 ~~~~iiglld~~~~~l~~~g~~~~~~~~~~-IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~ 232 (431)
|.|.++-+++-++..+.+.-++++|.+++. +-+.....||+++....=.|.-.++-++|..+++.|+.+++
T Consensus 53 w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 53 WEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 568889899999999999999999888754 55666788899888755445567788899999999986653
No 98
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=68.07 E-value=41 Score=31.91 Aligned_cols=125 Identities=14% Similarity=0.091 Sum_probs=85.2
Q ss_pred HHHHHHHhc--cCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccc-cccCCCchhhHHHHHHHHHHHHHHHhhccCC
Q 014092 110 RVLYKLALV--PMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDE-MISLPKYRFLFIGMLEALGVASGMAAAAMLP 186 (431)
Q Consensus 110 ~v~~K~~~~--~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~-~~~~p~~~~~iiglld~~~~~l~~~g~~~~~ 186 (431)
++.+|+..- .+++-.-|.+.+-++-.|...++-+.. +..+-...+ -...||..+.-.+.+...-|++.++|...+.
T Consensus 151 KV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL-~~T~VE~~qsFA~~PWG~l~G~A~L~lAFN~~iN~GiaL~~ 229 (290)
T KOG4314|consen 151 KVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALIL-AFTGVEHLQSFAAAPWGCLCGAAGLSLAFNFLINFGIALLN 229 (290)
T ss_pred HHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHH-HHhchHHHHHHhhCCchhhhhHHHHHHHHhhheeehhhhhc
Confidence 666666553 356666677776555544444443211 111111111 1134777788888888888999999998888
Q ss_pred ccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccC
Q 014092 187 GPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASG 235 (431)
Q Consensus 187 ~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~ 235 (431)
+-+.++=.-..+|-.+..-.++-+-..+.....|..+..+|.+++..+.
T Consensus 230 PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 230 PILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred hhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 8777776677788888888888777889999999999999988887654
No 99
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=64.83 E-value=95 Score=29.12 Aligned_cols=57 Identities=16% Similarity=0.209 Sum_probs=27.4
Q ss_pred CCCchhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHH---HHHHHHHhcCccch
Q 014092 159 LPKYRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQ---LGFSAVLLGKKFSV 215 (431)
Q Consensus 159 ~p~~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T---~llS~~fLk~r~~~ 215 (431)
.++|+.++++..-.+.-+..+.....+|+.....+.....+.- ++....++||||+.
T Consensus 144 ~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~~~~iiig~i~~~~~~~lkkk~~i 203 (206)
T PF06570_consen 144 PSWWKYILISVLAMVLWIVIFVLTSFLPPVINPVLPPWVYIIIGVIAFALRFYLKKKYNI 203 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3455655555554444444444443355554444443332222 22333678888874
No 100
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=58.85 E-value=29 Score=29.39 Aligned_cols=46 Identities=20% Similarity=0.202 Sum_probs=32.3
Q ss_pred CccHHHHHhhhh-HHHHHHHHHHHhcCccchhHHHHHHHHhhheeEE
Q 014092 186 PGPAIPILSQTF-LVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVA 231 (431)
Q Consensus 186 ~~~~~~IL~qs~-i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv 231 (431)
++..-.+++-.. ...-+++|.+++||++++.+..|-+..+.++..+
T Consensus 60 s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 60 SLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred CHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 444334444332 3444678889999999999999998888776554
No 101
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=58.42 E-value=7.1 Score=38.11 Aligned_cols=157 Identities=15% Similarity=0.108 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHH----HH
Q 014092 94 IIIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFI----GM 169 (431)
Q Consensus 94 ~i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~ii----gl 169 (431)
.++++++=++.||+.-.+..|. ++.|.-|..=++++..+....+++. .++ .+-....+. |+
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~-----GG~p~qQ~lGtT~GALifaiiv~~~--~~p--------~~T~~~~iv~~isG~ 67 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF-----GGKPYQQTLGTTLGALIFAIIVFLF--VSP--------ELTLTIFIVGFISGA 67 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec-----CCChhHhhhhccHHHHHHHHHHhee--ecC--------ccchhhHHHHHHhhh
Confidence 4567888899999877777664 5567777777888864433332222 111 111222333 55
Q ss_pred HHHHHHHHHHHhhccCCccHHH-HHhhhhHHHHHHHHHHHhcCccchhHH----HHHHHHhhheeEEeccCCCCCCc-cc
Q 014092 170 LEALGVASGMAAAAMLPGPAIP-ILSQTFLVWQLGFSAVLLGKKFSVTQI----AGCLLVATGVGVAVASGSNSGQM-LS 243 (431)
Q Consensus 170 ld~~~~~l~~~g~~~~~~~~~~-IL~qs~i~~T~llS~~fLk~r~~~~qi----iG~~lv~~GV~vv~~s~~~~~~~-~~ 243 (431)
+=..++..++-+..+...+.+. +-++++.+-+-+++++.++|--+..|+ +++++.+.|+.+....+.++..+ ..
T Consensus 68 ~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~ 147 (288)
T COG4975 68 FWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENP 147 (288)
T ss_pred HhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccCh
Confidence 5688999999998888666654 336677888999999999998776664 46677888998887765422111 11
Q ss_pred cccchHHHHHHHHHHHHHHHHH
Q 014092 244 RVDFLWPSMMIASSAFQAGASI 265 (431)
Q Consensus 244 ~~~~ig~~lillA~i~~A~s~V 265 (431)
+|--.|....+.|.+-|-.-.|
T Consensus 148 ~n~kkgi~~L~iSt~GYv~yvv 169 (288)
T COG4975 148 SNLKKGIVILLISTLGYVGYVV 169 (288)
T ss_pred HhhhhheeeeeeeccceeeeEe
Confidence 2223344444445554443333
No 102
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=54.60 E-value=76 Score=29.77 Aligned_cols=64 Identities=20% Similarity=0.273 Sum_probs=41.5
Q ss_pred cccccCCCchhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhh--HHHHHHHHH-HHhcCccchhH
Q 014092 154 DEMISLPKYRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTF--LVWQLGFSA-VLLGKKFSVTQ 217 (431)
Q Consensus 154 ~~~~~~p~~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~--i~~T~llS~-~fLk~r~~~~q 217 (431)
++-++.++||++....+..+--.+.+++....|.++...|.-.. |+=.++++. ++||||++.+.
T Consensus 154 d~sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~~L~pi~l~IiGav~lalRfylkkk~NIqs 220 (226)
T COG4858 154 DNSQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNPQLPPIALTIIGAVILALRFYLKKKKNIQS 220 (226)
T ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCcCCchHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 33445667888777777777667777887788877665554432 233344555 78899988653
No 103
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=53.43 E-value=3.9 Score=39.86 Aligned_cols=61 Identities=18% Similarity=0.101 Sum_probs=51.4
Q ss_pred chhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHH
Q 014092 162 YRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCL 222 (431)
Q Consensus 162 ~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~ 222 (431)
|.-.++|+.-+.+|.+++++.+.......=-+.|..++.+.+=..+|||||=+.+|+..++
T Consensus 210 ~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~ 270 (288)
T COG4975 210 WLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVI 270 (288)
T ss_pred HHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhh
Confidence 3456789999999999999998887777777899999999998999999999988876543
No 104
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=49.83 E-value=87 Score=32.08 Aligned_cols=47 Identities=17% Similarity=0.129 Sum_probs=32.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCccCceeehhhhhhH--HHHHHHHHHHhhh
Q 014092 246 DFLWPSMMIASSAFQAGASIIKEFIFDDAKKCLKGKSLDIFVVNSFGSGF--QALFVLLFLPFLS 308 (431)
Q Consensus 246 ~~ig~~lillA~i~~A~s~V~~E~~f~~y~k~lk~~~~d~~~l~~w~~l~--q~l~g~llLpi~~ 308 (431)
-++|+++..++++++|.-.+=.|| +..| .||+.| |.+++-+.+|...
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kk-------------vk~W---sWEs~Wlv~gi~swli~P~~~ 53 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKK-------------VKGW---SWESYWLVQGIFSWLIVPWLW 53 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhh-------------cCCc---cHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999998887776653 2334 566655 4555556777764
No 105
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=48.72 E-value=17 Score=36.08 Aligned_cols=128 Identities=15% Similarity=0.160 Sum_probs=76.7
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc---CCCchhhHHHHHH
Q 014092 95 IIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMIS---LPKYRFLFIGMLE 171 (431)
Q Consensus 95 i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~---~p~~~~~iiglld 171 (431)
++.-+..-+... .|.+..|....+..+--|-++..+.+-.++++.+.+... ++..+ ... .|-++|.++=.+.
T Consensus 187 vifGVlaSl~vA-lnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~ln---ge~~~-v~~~~~l~a~~Fw~~mtLs 261 (347)
T KOG1442|consen 187 VIFGVLASLAVA-LNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILN---GEFQA-VVGFPHLPAIKFWILMTLS 261 (347)
T ss_pred hHHHHHHHHHHH-HHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHc---chHHH-HcCcccchHHHHHHHHHHH
Confidence 333444444444 778888877777777778888887777667777654221 11111 111 2223444433333
Q ss_pred HHHHHHHHHh----hccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhh
Q 014092 172 ALGVASGMAA----AAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATG 227 (431)
Q Consensus 172 ~~~~~l~~~g----~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~G 227 (431)
.+-++.+.+. .-.|++-.+.|-......-+.+++..+.+|.-+...|-|.++++.|
T Consensus 262 glfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvg 321 (347)
T KOG1442|consen 262 GLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVG 321 (347)
T ss_pred HHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEeh
Confidence 3333322222 2355777788888888999999999999998887777765544433
No 106
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=47.28 E-value=89 Score=30.66 Aligned_cols=122 Identities=15% Similarity=0.020 Sum_probs=74.2
Q ss_pred HHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCchhhHH-HHHHHHHH
Q 014092 97 ISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLPKYRFLFI-GMLEALGV 175 (431)
Q Consensus 97 i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p~~~~~ii-glld~~~~ 175 (431)
.+++..+..| .|++=.|..... + ++|.-..|..+-.++-+.+...+. ..+.+.++++ |++-+.+|
T Consensus 4 a~~va~~~fG-s~~vPvK~~~~g--D-g~~fQw~~~~~i~~~g~~v~~~~~----------~p~f~p~amlgG~lW~~gN 69 (254)
T PF07857_consen 4 ACIVAVLFFG-SNFVPVKKFDTG--D-GFFFQWVMCSGIFLVGLVVNLILG----------FPPFYPWAMLGGALWATGN 69 (254)
T ss_pred hHHHHHHHhc-ccceeeEeccCC--C-cHHHHHHHHHHHHHHHHHHHHhcC----------CCcceeHHHhhhhhhhcCc
Confidence 3566677888 677777755432 2 445545555553222222211110 1123456777 67779999
Q ss_pred HHHHHhhccCCccHHHHHhhhhHHHHHHHH-HH-H--hcC---ccchhHHHHHHHHhhheeEEe
Q 014092 176 ASGMAAAAMLPGPAIPILSQTFLVWQLGFS-AV-L--LGK---KFSVTQIAGCLLVATGVGVAV 232 (431)
Q Consensus 176 ~l~~~g~~~~~~~~~~IL~qs~i~~T~llS-~~-f--Lk~---r~~~~qiiG~~lv~~GV~vv~ 232 (431)
.+.......+..++.+++=++.-..+.-.+ .+ + +++ +-.+..++|++++++|..+-.
T Consensus 70 ~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~ 133 (254)
T PF07857_consen 70 ILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS 133 (254)
T ss_pred eeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence 988888888888888888777544444433 22 2 322 246788999999999877653
No 107
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=43.37 E-value=13 Score=36.97 Aligned_cols=40 Identities=20% Similarity=0.152 Sum_probs=33.7
Q ss_pred HHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEE
Q 014092 192 ILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVA 231 (431)
Q Consensus 192 IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv 231 (431)
+....-=+++.++|.+..+..++.+||+|.++++.|-++-
T Consensus 273 lvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~f 312 (330)
T KOG1583|consen 273 LVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLF 312 (330)
T ss_pred EeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHH
Confidence 3344446789999999999999999999999999997664
No 108
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=41.91 E-value=57 Score=32.97 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=44.9
Q ss_pred HHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEE
Q 014092 179 MAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVA 231 (431)
Q Consensus 179 ~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv 231 (431)
+.-...|+.-..+|..-..-+.|.+++.+.++++++...|+|..++..|+..=
T Consensus 261 flLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 261 FLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 33345677777777777788899999999999999999999999999998875
No 109
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=38.96 E-value=2.7e+02 Score=24.43 Aligned_cols=21 Identities=19% Similarity=0.360 Sum_probs=18.6
Q ss_pred CCCCcHHHHHHHHHHHhhhee
Q 014092 397 GASLSPFFLFGSVILLLGLTL 417 (431)
Q Consensus 397 gE~ls~~~liG~~lI~~Gv~l 417 (431)
.+++++..++|.++++.|+++
T Consensus 118 ~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 118 KRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred CCCCCHHHHHHHHHHHHHHhC
Confidence 478899999999999999864
No 110
>PF15169 DUF4564: Domain of unknown function (DUF4564)
Probab=38.52 E-value=34 Score=31.89 Aligned_cols=73 Identities=22% Similarity=0.363 Sum_probs=50.1
Q ss_pred hcCccchhHH-HHHHHHhhheeEEeccCCCCCCccccccchHHHHHHHHHHHHHHHHHH--HHHhhhhhhhhccCCccCc
Q 014092 209 LGKKFSVTQI-AGCLLVATGVGVAVASGSNSGQMLSRVDFLWPSMMIASSAFQAGASII--KEFIFDDAKKCLKGKSLDI 285 (431)
Q Consensus 209 Lk~r~~~~qi-iG~~lv~~GV~vv~~s~~~~~~~~~~~~~ig~~lillA~i~~A~s~V~--~E~~f~~y~k~lk~~~~d~ 285 (431)
|+++++.+.| +++.++.+|++....++. .++|=++.+++|++-|++|+= +|.+|+|- |+ ++..
T Consensus 15 Lkrsp~~rsWsl~~gi~siGl~~~yys~d---------~~~wK~fyv~~c~fva~~n~edwee~iFdK~----kg-~V~l 80 (187)
T PF15169_consen 15 LKRSPGIRSWSLLVGIASIGLAAAYYSSD---------SLLWKLFYVAGCLFVALQNMEDWEEAIFDKS----KG-KVTL 80 (187)
T ss_pred EEcCCCccchhhHHHHHhcccceeeecCC---------chHHHHHHHHHHHHHHHhcchhhhheeEecc----CC-EEEE
Confidence 5777777777 456677778877766443 467889999999999999997 67677643 22 3554
Q ss_pred eeehhhhhhHHHHH
Q 014092 286 FVVNSFGSGFQALF 299 (431)
Q Consensus 286 ~~l~~w~~l~q~l~ 299 (431)
-..+. ++.+.
T Consensus 81 k~~nl----~~~il 90 (187)
T PF15169_consen 81 KYFNL----YEKIL 90 (187)
T ss_pred EeeeH----HHHHH
Confidence 44554 55543
No 111
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=36.31 E-value=2.5e+02 Score=29.75 Aligned_cols=30 Identities=13% Similarity=0.174 Sum_probs=26.3
Q ss_pred cHHHHHhhhhHHHHHHHHHHHhcCccchhH
Q 014092 188 PAIPILSQTFLVWQLGFSAVLLGKKFSVTQ 217 (431)
Q Consensus 188 ~~~~IL~qs~i~~T~llS~~fLk~r~~~~q 217 (431)
--+++|.++...|.++-..+++-||.+|++
T Consensus 401 EdyALL~GSl~LF~iLa~vM~~TRkiDWy~ 430 (430)
T PF06123_consen 401 EDYALLMGSLLLFIILALVMYLTRKIDWYA 430 (430)
T ss_pred hhHHHHHHHHHHHHHHHHHHheeecccccC
Confidence 348899999999999999999999998864
No 112
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=34.77 E-value=50 Score=28.01 Aligned_cols=21 Identities=19% Similarity=0.301 Sum_probs=19.2
Q ss_pred CCCCcHHHHHHHHHHHhhhee
Q 014092 397 GASLSPFFLFGSVILLLGLTL 417 (431)
Q Consensus 397 gE~ls~~~liG~~lI~~Gv~l 417 (431)
+|+++|.++.|+++++.+++.
T Consensus 85 ~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 85 GEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred CCCccHHHHHHHHHHHHhhhe
Confidence 999999999999999988764
No 113
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=33.22 E-value=1.1e+02 Score=26.22 Aligned_cols=21 Identities=24% Similarity=0.396 Sum_probs=17.3
Q ss_pred CCCCcHHHHHHHHHHHhhhee
Q 014092 397 GASLSPFFLFGSVILLLGLTL 417 (431)
Q Consensus 397 gE~ls~~~liG~~lI~~Gv~l 417 (431)
+|..++.-++|.++++.|+.+
T Consensus 91 e~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 91 EEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred CcccchhHHHHHHHHHcCeee
Confidence 445577789999999999976
No 114
>PRK11715 inner membrane protein; Provisional
Probab=32.46 E-value=3e+02 Score=29.25 Aligned_cols=30 Identities=10% Similarity=0.191 Sum_probs=26.1
Q ss_pred cHHHHHhhhhHHHHHHHHHHHhcCccchhH
Q 014092 188 PAIPILSQTFLVWQLGFSAVLLGKKFSVTQ 217 (431)
Q Consensus 188 ~~~~IL~qs~i~~T~llS~~fLk~r~~~~q 217 (431)
--+++|.++...|.++-..+++-||..|++
T Consensus 407 EDyALL~GSllLF~~La~vM~~TR~iDWy~ 436 (436)
T PRK11715 407 EDYALLLGSLLLFAVLALVMFLTRRIDWYA 436 (436)
T ss_pred hHHHHHHHHHHHHHHHHHHHheeecccccC
Confidence 348899999999999999999999998763
No 115
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=32.38 E-value=4.4e+02 Score=26.71 Aligned_cols=57 Identities=11% Similarity=-0.006 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhccCCccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhhe
Q 014092 172 ALGVASGMAAAAMLPGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGV 228 (431)
Q Consensus 172 ~~~~~l~~~g~~~~~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV 228 (431)
..-++..+.....+++..+.++.--....|.+--.++.+++.++...+|+.++++|=
T Consensus 239 f~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~gg 295 (314)
T KOG1444|consen 239 FGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGG 295 (314)
T ss_pred HHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhh
Confidence 334445555555556665666553344444444445555556666666666655543
No 116
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=30.41 E-value=93 Score=31.86 Aligned_cols=105 Identities=13% Similarity=0.040 Sum_probs=73.2
Q ss_pred hhHHHHHHHHHHHHHHHhhccCCccH-HHHHhhhhHHHHHHHHHHHhcC-------ccchhHHHHHHHHhhheeEEeccC
Q 014092 164 FLFIGMLEALGVASGMAAAAMLPGPA-IPILSQTFLVWQLGFSAVLLGK-------KFSVTQIAGCLLVATGVGVAVASG 235 (431)
Q Consensus 164 ~~iiglld~~~~~l~~~g~~~~~~~~-~~IL~qs~i~~T~llS~~fLk~-------r~~~~qiiG~~lv~~GV~vv~~s~ 235 (431)
-.+.|++=.+++..+-.+..|+..++ ++|..++...+-.++-.++.++ +=...-.+|++++++|++++...+
T Consensus 76 ~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG 155 (344)
T PF06379_consen 76 TFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG 155 (344)
T ss_pred HHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence 34557777778877777777886666 6777788888888887776553 223456899999999999986543
Q ss_pred CC-----CCCccccccchHHHHHHHHHHHHHHHHHHHH
Q 014092 236 SN-----SGQMLSRVDFLWPSMMIASSAFQAGASIIKE 268 (431)
Q Consensus 236 ~~-----~~~~~~~~~~ig~~lillA~i~~A~s~V~~E 268 (431)
.. ++++.+-+--.|.++.++|-+.+|+-+.=.|
T Consensus 156 ~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 156 SMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred HhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 21 1111122345688899999999988888766
No 117
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=29.93 E-value=17 Score=36.07 Aligned_cols=125 Identities=10% Similarity=0.061 Sum_probs=0.0
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCC
Q 014092 81 SPQTASPSSSNSQIIIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQITTFGYVVIYFSILYTRYLMGIVTDEMISLP 160 (431)
Q Consensus 81 ~~~~~~~~~~~~~~i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l~~~~~~ll~~~il~~r~~~~~~~~~~~~~p 160 (431)
||.-|+|.+|.-...+++++..+.|- |-+|.+-....--.+..+ .+..+++..++.++|++
T Consensus 15 ~pr~p~~~a~l~~~~llll~ail~w~------~iimsd~t~~a~~vl~sf-AvvliiIIiIImlF~Rr------------ 75 (381)
T PF05297_consen 15 PPRCPQPHASLLFGLLLLLVAILVWF------FIIMSDLTQGALTVLYSF-AVVLIIIIIIIMLFKRR------------ 75 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCcchhHHHHHHHHHHHHHHHH------HHHHhccccchHHHHHHH-HHHHHHHHHHHHHHHHh------------
Q ss_pred CchhhHHHHHHHHHHHHHHHhhccCCccHHHHHhhhhHHH------HHHHHHHHhcCcc--chhHHHHHHHHhh
Q 014092 161 KYRFLFIGMLEALGVASGMAAAAMLPGPAIPILSQTFLVW------QLGFSAVLLGKKF--SVTQIAGCLLVAT 226 (431)
Q Consensus 161 ~~~~~iiglld~~~~~l~~~g~~~~~~~~~~IL~qs~i~~------T~llS~~fLk~r~--~~~qiiG~~lv~~ 226 (431)
.++-+|++-.+--+....-....+-.=+.++.+..+.+ -.+..++++-||| ++|++++..+.|.
T Consensus 76 --LLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Ym~lLr~~GAs~WtiLaFcLAF~ 147 (381)
T PF05297_consen 76 --LLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFYMWLLRELGASFWTILAFCLAFL 147 (381)
T ss_dssp --------------------------------------------------------------------------
T ss_pred --hcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
No 118
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.69 E-value=56 Score=27.42 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=25.4
Q ss_pred HHHHHHHHhcCccchhHHHHHHHHhhheeE
Q 014092 201 QLGFSAVLLGKKFSVTQIAGCLLVATGVGV 230 (431)
Q Consensus 201 T~llS~~fLk~r~~~~qiiG~~lv~~GV~v 230 (431)
-+.+|.++|||.+++.++.|..+...|+..
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 356889999999999999998888877654
No 119
>PF06210 DUF1003: Protein of unknown function (DUF1003); InterPro: IPR010406 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=29.66 E-value=1.4e+02 Score=25.40 Aligned_cols=37 Identities=22% Similarity=0.305 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHhccCCChhHHHHHH
Q 014092 92 SQIIIISSAVTVTLAIANRVLYKLALVPMKQYPFFLAQI 130 (431)
Q Consensus 92 ~~~i~i~~~~~li~Gs~n~v~~K~~~~~~~~~Pffla~l 130 (431)
+..+.+..+.+++|-..|...... .++.+|||-+-.+
T Consensus 4 ~~Fi~~~~~~~~~Wi~~N~~~~~~--~~fDpyPFilLnl 40 (108)
T PF06210_consen 4 WTFIIIFTVFLAVWILLNILAPPR--PAFDPYPFILLNL 40 (108)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccc--CCCCCccHHHHHH
Confidence 345666777788888888655443 5678889877665
No 120
>PF10951 DUF2776: Protein of unknown function (DUF2776); InterPro: IPR021240 This bacterial family of proteins has no known function.
Probab=29.57 E-value=1.9e+02 Score=29.09 Aligned_cols=43 Identities=21% Similarity=-0.039 Sum_probs=21.1
Q ss_pred hhHHHHHHHHHHHHHHHhh-ccCCccHHHHHhhhhHHHHHHHHH
Q 014092 164 FLFIGMLEALGVASGMAAA-AMLPGPAIPILSQTFLVWQLGFSA 206 (431)
Q Consensus 164 ~~iiglld~~~~~l~~~g~-~~~~~~~~~IL~qs~i~~T~llS~ 206 (431)
.+++|-.+.+......++. ........-++-+...+.=-+.|.
T Consensus 229 Vl~mGsi~~l~Gl~vl~~~~~~~~~~~G~ilIGLGlvCySIsSK 272 (347)
T PF10951_consen 229 VLVMGSISILWGLYVLLASSGPANNAPGYILIGLGLVCYSISSK 272 (347)
T ss_pred HHHHhhHHHHhhhheEEecCCcccCCcceeeeehhhHHHHHHHH
Confidence 4566888877555443332 223333344555555444444444
No 121
>PF09771 Tmemb_18A: Transmembrane protein 188; InterPro: IPR019168 The function of this family of transmembrane proteins has not, as yet, been determined.
Probab=27.33 E-value=1.5e+02 Score=25.87 Aligned_cols=22 Identities=23% Similarity=0.391 Sum_probs=18.8
Q ss_pred CCCCchHHHHHHHHHHHHhhhh
Q 014092 87 PSSSNSQIIIISSAVTVTLAIA 108 (431)
Q Consensus 87 ~~~~~~~~i~i~~~~~li~Gs~ 108 (431)
|++-+|..++.++.++..+|..
T Consensus 25 Pst~RWRiiL~v~svct~v~A~ 46 (125)
T PF09771_consen 25 PSTTRWRIILVVVSVCTAVGAW 46 (125)
T ss_pred CcchhHHHHHHHHHHHHHHHHH
Confidence 7889999999899888888843
No 122
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=27.21 E-value=6.2e+02 Score=25.47 Aligned_cols=52 Identities=19% Similarity=0.170 Sum_probs=42.9
Q ss_pred CccHHHHHhhhhHHHHHHHHHHHhcCccchhHHHHHHHHhhheeEEeccCCC
Q 014092 186 PGPAIPILSQTFLVWQLGFSAVLLGKKFSVTQIAGCLLVATGVGVAVASGSN 237 (431)
Q Consensus 186 ~~~~~~IL~qs~i~~T~llS~~fLk~r~~~~qiiG~~lv~~GV~vv~~s~~~ 237 (431)
.+..+......-=-.|.++|+++..|.++..+.-|..+++.|+.+-+.+..+
T Consensus 285 GA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 285 GALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred chhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 4455556666667789999999999999999999999999999998876643
No 123
>PF04973 NMN_transporter: Nicotinamide mononucleotide transporter; InterPro: IPR006419 The PnuC protein of Escherichia coli is membrane protein responsible for nicotinamide mononucleotide transport, subject to regulation by interaction with the NadR (also called NadI) protein (see IPR006417 from INTERPRO). The extreme N- and C-terminal regions are poorly conserved. ; GO: 0006810 transport, 0016020 membrane
Probab=26.05 E-value=5e+02 Score=23.57 Aligned_cols=24 Identities=17% Similarity=0.176 Sum_probs=12.7
Q ss_pred CCccHHHHHhhhhHHHHHHHHHHH
Q 014092 185 LPGPAIPILSQTFLVWQLGFSAVL 208 (431)
Q Consensus 185 ~~~~~~~IL~qs~i~~T~llS~~f 208 (431)
.+.+-...++......+.+-..+.
T Consensus 107 ~~~~~~~~~Da~~~~~siva~~l~ 130 (181)
T PF04973_consen 107 LTDSPFPWLDALTTVLSIVAQWLM 130 (181)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHH
Confidence 333445666666665555554433
No 124
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=23.42 E-value=56 Score=27.75 Aligned_cols=31 Identities=19% Similarity=0.405 Sum_probs=24.7
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhheeecCCCC
Q 014092 393 YLPEGASLSPFFLFGSVILLLGLTLYNLPQP 423 (431)
Q Consensus 393 ~l~~gE~ls~~~liG~~lI~~Gv~lYn~~~~ 423 (431)
+.-++++.+.++++|.++.+.|+.+.-..++
T Consensus 76 w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 76 WLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred hhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 3446899999999999999999887655543
No 125
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=22.47 E-value=1.7e+02 Score=28.76 Aligned_cols=63 Identities=8% Similarity=0.009 Sum_probs=35.1
Q ss_pred HHHHHHhcccchHHHHHHHHhHHHhhhHhhhcccCCCCC-CCC--CcHHHHHHHHHHHhhheeecCC
Q 014092 358 ISMLRLMKISSAVVSSLVVMLSVPIAIYVLSLPLPYLPE-GAS--LSPFFLFGSVILLLGLTLYNLP 421 (431)
Q Consensus 358 ~~~~~l~k~~sA~~~sl~~~l~vPl~~~~fs~~~~~l~~-gE~--ls~~~liG~~lI~~Gv~lYn~~ 421 (431)
+...-++|..+=...-+......-+++|+.+-. .+++. .|. -.++..+|.+++++|..+|..-
T Consensus 70 ~~~vpii~~iGLglg~liW~s~n~l~Gw~~grf-GlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 70 ILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRF-GLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI 135 (254)
T ss_pred eeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhc-eeccccccccchhHHHHHHHHHHHHHHHheeee
Confidence 333445555443333333333345677776531 11211 122 3558899999999999999653
No 126
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=21.78 E-value=2.1e+02 Score=23.11 Aligned_cols=15 Identities=33% Similarity=0.335 Sum_probs=5.9
Q ss_pred CCCCcHHHHHHHHHH
Q 014092 397 GASLSPFFLFGSVIL 411 (431)
Q Consensus 397 gE~ls~~~liG~~lI 411 (431)
+|++++.+++|..+|
T Consensus 79 ~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 79 GESLSLSKWLGIGLI 93 (93)
T ss_dssp --------HHHHHHH
T ss_pred CCCCCHHHHhheeeC
Confidence 999999999998875
No 127
>PRK02237 hypothetical protein; Provisional
Probab=20.64 E-value=55 Score=27.90 Aligned_cols=29 Identities=17% Similarity=0.358 Sum_probs=23.3
Q ss_pred CCCCCCCcHHHHHHHHHHHhhheeecCCC
Q 014092 394 LPEGASLSPFFLFGSVILLLGLTLYNLPQ 422 (431)
Q Consensus 394 l~~gE~ls~~~liG~~lI~~Gv~lYn~~~ 422 (431)
.-+|.+.+.++++|.++.++|+.+.-..+
T Consensus 79 ~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 79 VVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 33689999999999999999987654443
No 128
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.07 E-value=1.5e+02 Score=24.99 Aligned_cols=21 Identities=14% Similarity=0.237 Sum_probs=19.0
Q ss_pred CCCCcHHHHHHHHHHHhhhee
Q 014092 397 GASLSPFFLFGSVILLLGLTL 417 (431)
Q Consensus 397 gE~ls~~~liG~~lI~~Gv~l 417 (431)
.|++.|.++.|+.+++.|+..
T Consensus 92 ~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 92 KEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred cCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999988764
Done!