Query 014093
Match_columns 431
No_of_seqs 46 out of 48
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 05:22:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014093.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014093hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lvfa_ a.47.2.1 (A:) Syntaxin 50.4 7.5 0.00054 30.3 4.2 59 371-429 9-72 (106)
2 d2pv2a1 d.26.1.1 (A:172-274) P 45.2 12 0.00085 28.2 4.4 34 372-409 23-56 (103)
3 d1seta1 a.2.7.1 (A:1-110) Sery 31.4 98 0.0071 23.2 8.2 68 354-423 28-95 (110)
4 d1eq3a_ d.26.1.1 (A:) Parvulin 21.6 26 0.0019 26.3 2.7 13 391-403 26-38 (96)
5 d2v9va2 a.4.5.35 (A:438-510) C 19.6 52 0.0038 23.1 3.9 46 60-108 3-48 (73)
6 d2di4a1 a.269.1.1 (A:406-607) 15.9 92 0.0067 25.3 5.2 28 375-402 166-194 (202)
7 d1pd3a_ a.30.3.1 (A:) Nonstruc 14.7 44 0.0032 23.5 2.3 23 403-425 6-28 (54)
8 d1m5ya3 d.26.1.1 (A:279-386) P 14.4 72 0.0052 23.8 3.8 15 389-403 38-52 (108)
9 d1jnsa_ d.26.1.1 (A:) Parvulin 14.3 67 0.0049 23.5 3.5 15 391-405 27-41 (92)
10 d1r8da_ a.6.1.3 (A:) Multidrug 14.0 2.2E+02 0.016 20.7 6.6 39 347-385 68-106 (109)
No 1
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=50.37 E-value=7.5 Score=30.35 Aligned_cols=59 Identities=14% Similarity=0.343 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhhhhhcC-----ChhHHHHHHHHHHHHHHHhhhhhhHHHHHhhhcCCCCCC
Q 014093 371 EEASVAYNKAVTRLREYQGV-----DPRFDNIARQYHDIVKKLENMQWTIHQVEMDLKRLPDHP 429 (431)
Q Consensus 371 ~e~eq~~~~s~~~L~~Ye~L-----G~eFd~LvrEY~~L~q~IenkrWaL~E~~~~~~~~~~~~ 429 (431)
++....+++.+..++.|..+ ++.=+.+..-+.+|+..|.+-+|-|.+|++...-...||
T Consensus 9 ~EVq~s~~~~~~l~~~w~~~~~~~~~~~~~e~~~~~~eL~~~l~siewdL~dLe~av~~ve~np 72 (106)
T d1lvfa_ 9 GEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANP 72 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSG
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCH
Confidence 34444455555555555322 332345666788999999999999999999876433333
No 2
>d2pv2a1 d.26.1.1 (A:172-274) Porin chaperone SurA, PPIase domains {Escherichia coli [TaxId: 562]}
Probab=45.16 E-value=12 Score=28.16 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhhhhhcCChhHHHHHHHHHHHHHHHh
Q 014093 372 EASVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLE 409 (431)
Q Consensus 372 e~eq~~~~s~~~L~~Ye~LG~eFd~LvrEY~~L~q~Ie 409 (431)
++......+..+|+. |.+|+++|++|.+=..+..
T Consensus 23 ~~~~~a~~~~~~l~~----g~~F~~la~~~S~~~~~~~ 56 (103)
T d2pv2a1 23 EAESQARAIVDQARN----GADFGKLAIAHSADQQALN 56 (103)
T ss_dssp HHHHHHHHHHHHHHT----TCCHHHHHHHHCCSTTGGG
T ss_pred HHHHHHHHHHHHHHc----CCCHHHHhccccccccccc
Confidence 333444444445543 8999999999965444433
No 3
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=31.38 E-value=98 Score=23.18 Aligned_cols=68 Identities=13% Similarity=0.185 Sum_probs=53.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCChhHHHHHHHHHHHHHHHhhhhhhHHHHHhhhc
Q 014093 354 ESIPALHKIRKYLVEATEEASVAYNKAVTRLREYQGVDPRFDNIARQYHDIVKKLENMQWTIHQVEMDLK 423 (431)
Q Consensus 354 EkV~ALrkIR~~Le~A~~e~eq~~~~s~~~L~~Ye~LG~eFd~LvrEY~~L~q~IenkrWaL~E~~~~~~ 423 (431)
+.|-.+..-|..+...++..+.+.+....... ..-|.+.+++..+-..|.++|....=.+.+++..+.
T Consensus 28 d~i~~ld~~rr~l~~~~e~l~~~rN~~sk~i~--k~~~~~~~~l~~~~k~lk~~i~~le~~~~~~~~~l~ 95 (110)
T d1seta1 28 EALLALDREVQELKKRLQEVQTERNQVAKRVP--KAPPEEKEALIARGKALGEEAKRLEEALREKEARLE 95 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777777788888888888888888776654 456788999999999999999987777777776653
No 4
>d1eq3a_ d.26.1.1 (A:) Parvulin {Human (Homo sapiens), hpar14 [TaxId: 9606]}
Probab=21.62 E-value=26 Score=26.35 Aligned_cols=13 Identities=38% Similarity=0.779 Sum_probs=11.7
Q ss_pred ChhHHHHHHHHHH
Q 014093 391 DPRFDNIARQYHD 403 (431)
Q Consensus 391 G~eFd~LvrEY~~ 403 (431)
|++|+++|++|.+
T Consensus 26 g~~F~~lA~~~S~ 38 (96)
T d1eq3a_ 26 GMRFNEVAAQYSE 38 (96)
T ss_dssp TTSHHHHHHHHCC
T ss_pred CCCHHHHHHHhCc
Confidence 8899999999964
No 5
>d2v9va2 a.4.5.35 (A:438-510) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=19.57 E-value=52 Score=23.15 Aligned_cols=46 Identities=17% Similarity=0.245 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCccccccccccccCCCchhHHHHH
Q 014093 60 AMAIYCEAIAMVEGYQQAVSVANLGGIRDVQGLSSQLGLKSSPQVYETL 108 (431)
Q Consensus 60 ~~~i~~~~~emv~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~yetL 108 (431)
...+-..+.+.|.+||..-+. ..|. +..-|.-.++.+-++.+++.+
T Consensus 3 ~~~l~~~i~~~L~~fH~~~P~--~~G~-~keeLr~~l~~~~~~~~f~~l 48 (73)
T d2v9va2 3 YQAWWQAVTRALEEFHSRYPL--RPGL-AREELRSRYFSRLPARVYQAL 48 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT--SSCE-EHHHHHHHHCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCcc--ccCC-CHHHHHHHhcccCCHHHHHHH
Confidence 346677899999999888553 3333 224455555566677777766
No 6
>d2di4a1 a.269.1.1 (A:406-607) Cell division protein FtsH, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=15.94 E-value=92 Score=25.29 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=19.1
Q ss_pred HHHHHHHHHhhhhhcC-ChhHHHHHHHHH
Q 014093 375 VAYNKAVTRLREYQGV-DPRFDNIARQYH 402 (431)
Q Consensus 375 q~~~~s~~~L~~Ye~L-G~eFd~LvrEY~ 402 (431)
..+.+....|-+.+.| |.+|.+|.++|.
T Consensus 166 ~~l~~la~~Lle~etL~~~ei~~il~~~~ 194 (202)
T d2di4a1 166 EPLKAVVKKLLEKETITCEEFVEVFKLYG 194 (202)
T ss_dssp HHHHHHHHHHHHHSEECHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCccCHHHHHHHHHHCC
Confidence 4445555566666665 678999999885
No 7
>d1pd3a_ a.30.3.1 (A:) Nonstructural protein ns2, Nep, M1-binding domain {Influenza A virus [TaxId: 11320]}
Probab=14.72 E-value=44 Score=23.51 Aligned_cols=23 Identities=30% Similarity=0.585 Sum_probs=19.1
Q ss_pred HHHHHHhhhhhhHHHHHhhhcCC
Q 014093 403 DIVKKLENMQWTIHQVEMDLKRL 425 (431)
Q Consensus 403 ~L~q~IenkrWaL~E~~~~~~~~ 425 (431)
+|-++.+..||-++|+...||.-
T Consensus 6 qlsqkfeeirwlieevrh~lk~t 28 (54)
T d1pd3a_ 6 QLGQKFEEIRWLIEEVRHRLKIT 28 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 56678888899999999888754
No 8
>d1m5ya3 d.26.1.1 (A:279-386) Porin chaperone SurA, PPIase domains {Escherichia coli [TaxId: 562]}
Probab=14.44 E-value=72 Score=23.81 Aligned_cols=15 Identities=13% Similarity=0.350 Sum_probs=12.2
Q ss_pred cCChhHHHHHHHHHH
Q 014093 389 GVDPRFDNIARQYHD 403 (431)
Q Consensus 389 ~LG~eFd~LvrEY~~ 403 (431)
.=|.+|.++|++|..
T Consensus 38 ~~~~~F~~lA~~~S~ 52 (108)
T d1m5ya3 38 SGKTTFAAAAKEFSQ 52 (108)
T ss_dssp TTSSCHHHHHHHHCC
T ss_pred cCcccHHHHHHHhCc
Confidence 344789999999975
No 9
>d1jnsa_ d.26.1.1 (A:) Parvulin 10 (rotamase C) {Escherichia coli [TaxId: 562]}
Probab=14.34 E-value=67 Score=23.46 Aligned_cols=15 Identities=13% Similarity=0.186 Sum_probs=12.9
Q ss_pred ChhHHHHHHHHHHHH
Q 014093 391 DPRFDNIARQYHDIV 405 (431)
Q Consensus 391 G~eFd~LvrEY~~L~ 405 (431)
|.+|+++|++|.+-.
T Consensus 27 g~~F~~lA~~~S~d~ 41 (92)
T d1jnsa_ 27 GADFGKLAKKHSICP 41 (92)
T ss_dssp TCCHHHHHHHHHCST
T ss_pred CCCHHHHHHHhCCCc
Confidence 889999999997653
No 10
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=14.02 E-value=2.2e+02 Score=20.75 Aligned_cols=39 Identities=13% Similarity=0.128 Sum_probs=21.0
Q ss_pred hcccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014093 347 LLGTYTQESIPALHKIRKYLVEATEEASVAYNKAVTRLR 385 (431)
Q Consensus 347 L~dTYTpEkV~ALrkIR~~Le~A~~e~eq~~~~s~~~L~ 385 (431)
+.+-...+...++...++.|....++........+..|.
T Consensus 68 ~l~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~l~~~l~ 106 (109)
T d1r8da_ 68 MLDHPNFDRKAALQSQKEILMKKKQRMDEMIQTIDRTLL 106 (109)
T ss_dssp HHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556666666666665555555544444444443
Done!