Query 014101
Match_columns 430
No_of_seqs 420 out of 2612
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 05:31:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014101.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014101hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dkx_A RAS-related protein RAB 99.9 4E-27 1.4E-31 216.2 14.5 141 284-429 12-153 (216)
2 1g16_A RAS-related protein SEC 99.9 6.7E-23 2.3E-27 179.2 15.4 141 284-429 2-142 (170)
3 2hup_A RAS-related protein RAB 99.9 5.2E-23 1.8E-27 186.4 15.0 146 279-429 23-170 (201)
4 2fu5_C RAS-related protein RAB 99.9 4.5E-23 1.5E-27 183.1 13.6 142 283-429 6-148 (183)
5 3q3j_B RHO-related GTP-binding 99.9 1.1E-22 3.6E-27 186.4 16.2 142 281-429 23-179 (214)
6 3tw8_B RAS-related protein RAB 99.9 1.9E-22 6.3E-27 178.3 17.2 142 282-429 6-148 (181)
7 1z08_A RAS-related protein RAB 99.9 1.6E-22 5.6E-27 176.9 16.3 142 283-429 4-146 (170)
8 2ew1_A RAS-related protein RAB 99.9 1.5E-22 5E-27 183.7 16.4 142 283-429 24-166 (201)
9 1zbd_A Rabphilin-3A; G protein 99.9 4.8E-22 1.6E-26 179.7 19.0 142 283-429 6-148 (203)
10 1z06_A RAS-related protein RAB 99.9 2.9E-22 1E-26 179.2 17.3 143 283-429 18-162 (189)
11 2efe_B Small GTP-binding prote 99.9 3.9E-22 1.3E-26 176.5 17.9 142 283-429 10-152 (181)
12 3cbq_A GTP-binding protein REM 99.9 1.5E-22 5.1E-27 182.6 15.4 145 281-429 19-165 (195)
13 1r2q_A RAS-related protein RAB 99.9 2.2E-22 7.4E-27 175.8 15.8 142 283-429 4-146 (170)
14 3tkl_A RAS-related protein RAB 99.9 2.7E-22 9.3E-27 180.0 16.8 143 282-429 13-156 (196)
15 1ek0_A Protein (GTP-binding pr 99.9 2.9E-22 1E-26 174.9 16.1 140 285-429 3-146 (170)
16 2gf9_A RAS-related protein RAB 99.9 2.7E-22 9.2E-27 179.5 16.1 143 282-429 19-162 (189)
17 2a5j_A RAS-related protein RAB 99.9 1.9E-22 6.6E-27 180.8 15.1 143 282-429 18-161 (191)
18 2bme_A RAB4A, RAS-related prot 99.9 2.8E-22 9.7E-27 178.3 16.0 142 283-429 8-150 (186)
19 3t5g_A GTP-binding protein RHE 99.9 3.4E-22 1.2E-26 177.1 16.2 141 284-429 5-146 (181)
20 1z0j_A RAB-22, RAS-related pro 99.9 5E-22 1.7E-26 173.6 17.0 141 284-429 5-146 (170)
21 3kkq_A RAS-related protein M-R 99.9 3E-22 1E-26 177.8 15.8 143 282-429 15-158 (183)
22 1z0f_A RAB14, member RAS oncog 99.9 3.9E-22 1.3E-26 175.9 16.3 142 283-429 13-155 (179)
23 2bcg_Y Protein YP2, GTP-bindin 99.9 4.9E-22 1.7E-26 180.2 17.3 142 283-429 6-148 (206)
24 3cph_A RAS-related protein SEC 99.9 4E-22 1.4E-26 181.4 16.6 143 282-429 17-159 (213)
25 2fg5_A RAB-22B, RAS-related pr 99.9 3.9E-22 1.3E-26 179.1 16.2 142 283-429 21-163 (192)
26 2nzj_A GTP-binding protein REM 99.9 8.4E-22 2.9E-26 173.2 17.7 141 284-429 3-146 (175)
27 3dz8_A RAS-related protein RAB 99.9 7.8E-23 2.7E-27 183.4 11.1 143 282-429 20-163 (191)
28 3q85_A GTP-binding protein REM 99.9 4.1E-22 1.4E-26 174.3 15.4 141 285-429 2-144 (169)
29 1x3s_A RAS-related protein RAB 99.9 4.4E-22 1.5E-26 178.3 15.8 143 283-429 13-155 (195)
30 2g6b_A RAS-related protein RAB 99.9 9.9E-22 3.4E-26 173.7 17.7 142 283-429 8-151 (180)
31 3c5c_A RAS-like protein 12; GD 99.9 2.3E-22 7.8E-27 180.0 13.5 143 283-429 19-162 (187)
32 2lhi_A Calmodulin, serine/thre 99.9 4E-23 1.4E-27 183.5 8.5 142 48-239 2-146 (176)
33 1wms_A RAB-9, RAB9, RAS-relate 99.9 8.5E-22 2.9E-26 173.6 17.0 145 283-429 5-151 (177)
34 1z2a_A RAS-related protein RAB 99.9 3.8E-22 1.3E-26 174.1 14.5 141 283-429 3-144 (168)
35 1m7b_A RND3/RHOE small GTP-bin 99.9 6.5E-22 2.2E-26 176.2 16.2 140 283-429 5-159 (184)
36 3clv_A RAB5 protein, putative; 99.9 1E-21 3.5E-26 176.7 17.6 140 283-429 5-181 (208)
37 3q72_A GTP-binding protein RAD 99.9 8.8E-22 3E-26 171.7 16.4 139 285-429 2-141 (166)
38 3oes_A GTPase rhebl1; small GT 99.9 4.3E-22 1.5E-26 180.1 14.9 145 280-429 19-164 (201)
39 2oil_A CATX-8, RAS-related pro 99.9 4.7E-22 1.6E-26 178.4 14.9 143 282-429 22-165 (193)
40 2il1_A RAB12; G-protein, GDP, 99.9 4.3E-22 1.5E-26 178.9 14.5 143 282-429 23-167 (192)
41 2p5s_A RAS and EF-hand domain 99.9 3E-22 1E-26 180.8 13.4 143 282-429 25-174 (199)
42 2y8e_A RAB-protein 6, GH09086P 99.9 4.7E-22 1.6E-26 175.3 14.4 141 284-429 13-154 (179)
43 2o52_A RAS-related protein RAB 99.9 3.9E-22 1.3E-26 180.4 14.2 142 283-429 23-165 (200)
44 3bc1_A RAS-related protein RAB 99.9 1.9E-21 6.4E-26 173.7 18.1 143 283-429 9-162 (195)
45 2obh_A Centrin-2; DNA repair c 99.9 2E-22 6.8E-27 172.3 10.9 138 52-238 1-141 (143)
46 3cpj_B GTP-binding protein YPT 99.9 5.8E-22 2E-26 182.4 14.7 142 283-429 11-153 (223)
47 2lmt_A Calmodulin-related prot 99.9 4.5E-23 1.5E-27 177.6 6.7 139 50-237 3-144 (148)
48 2yc2_C IFT27, small RAB-relate 99.9 6.5E-22 2.2E-26 179.0 14.5 145 283-429 18-168 (208)
49 3reg_A RHO-like small GTPase; 99.9 1.5E-21 5E-26 175.3 16.6 141 282-429 20-165 (194)
50 2hxs_A RAB-26, RAS-related pro 99.9 1.6E-22 5.5E-27 178.5 10.1 145 283-429 4-150 (178)
51 2g3y_A GTP-binding protein GEM 99.9 2.7E-21 9.1E-26 176.8 18.4 142 283-429 35-180 (211)
52 3i5g_C Myosin catalytic light 99.9 4.2E-23 1.4E-27 180.3 5.8 143 49-239 1-150 (159)
53 2iwr_A Centaurin gamma 1; ANK 99.9 9.5E-22 3.2E-26 173.8 14.4 138 283-429 5-146 (178)
54 4dsu_A GTPase KRAS, isoform 2B 99.9 2.3E-21 7.7E-26 172.6 16.5 141 284-429 3-143 (189)
55 1kao_A RAP2A; GTP-binding prot 99.9 1.8E-21 6E-26 169.3 15.4 140 285-429 3-143 (167)
56 1gwn_A RHO-related GTP-binding 99.9 2.1E-21 7.3E-26 176.5 16.2 140 283-429 26-180 (205)
57 1c1y_A RAS-related protein RAP 99.9 1.6E-21 5.3E-26 170.0 14.6 140 285-429 3-144 (167)
58 1vg8_A RAS-related protein RAB 99.9 2.6E-21 8.7E-26 175.2 16.5 145 283-429 6-152 (207)
59 3ihw_A Centg3; RAS, centaurin, 99.9 2.7E-21 9.1E-26 172.7 16.2 139 280-429 15-157 (184)
60 2fn4_A P23, RAS-related protei 99.9 1.5E-21 5.3E-26 172.3 14.3 142 283-429 7-149 (181)
61 2atx_A Small GTP binding prote 99.9 3.2E-21 1.1E-25 173.0 16.5 140 283-429 16-170 (194)
62 1u8z_A RAS-related protein RAL 99.9 2.2E-21 7.5E-26 168.8 14.9 141 284-429 3-144 (168)
63 3i5g_B Myosin regulatory light 99.9 3.1E-22 1.1E-26 173.6 9.2 139 46-238 5-146 (153)
64 2bov_A RAla, RAS-related prote 99.9 3.7E-21 1.3E-25 173.9 16.3 143 282-429 11-154 (206)
65 2f7s_A C25KG, RAS-related prot 99.9 1.4E-21 4.9E-26 178.6 13.7 144 282-429 22-176 (217)
66 1ky3_A GTP-binding protein YPT 99.9 3.8E-21 1.3E-25 170.0 15.5 145 283-429 6-155 (182)
67 2q3h_A RAS homolog gene family 99.9 3.6E-21 1.2E-25 173.7 15.1 142 281-429 16-172 (201)
68 1exr_A Calmodulin; high resolu 99.9 2.7E-21 9.3E-26 165.9 13.2 141 49-238 2-145 (148)
69 3u0k_A Rcamp; fluorescent prot 99.9 4.5E-22 1.6E-26 195.1 9.3 145 44-237 289-436 (440)
70 3l0i_B RAS-related protein RAB 99.9 1.1E-22 3.7E-27 183.8 4.3 143 282-429 30-173 (199)
71 3con_A GTPase NRAS; structural 99.9 1.2E-20 4E-25 168.7 17.5 141 284-429 20-160 (190)
72 2a9k_A RAS-related protein RAL 99.9 4.8E-21 1.6E-25 170.0 14.7 142 283-429 16-158 (187)
73 2ce2_X GTPase HRAS; signaling 99.9 7E-21 2.4E-25 165.1 15.1 140 285-429 3-142 (166)
74 2j1l_A RHO-related GTP-binding 99.9 6.1E-21 2.1E-25 174.5 15.2 140 283-429 32-186 (214)
75 2atv_A RERG, RAS-like estrogen 99.9 4.1E-21 1.4E-25 172.8 13.8 141 283-429 26-167 (196)
76 2j0v_A RAC-like GTP-binding pr 99.8 4.7E-21 1.6E-25 174.5 13.0 140 283-429 7-157 (212)
77 1mh1_A RAC1; GTP-binding, GTPa 99.8 1.2E-20 4.2E-25 167.4 15.2 139 284-429 4-157 (186)
78 2gco_A H9, RHO-related GTP-bin 99.8 1.7E-20 5.8E-25 169.7 16.2 140 283-429 23-177 (201)
79 2gf0_A GTP-binding protein DI- 99.8 8.1E-21 2.8E-25 170.7 14.0 143 283-429 6-148 (199)
80 2erx_A GTP-binding protein DI- 99.8 9.2E-21 3.1E-25 165.7 14.0 142 284-429 2-144 (172)
81 2cjw_A GTP-binding protein GEM 99.8 2.4E-20 8.2E-25 167.7 16.2 142 283-429 4-149 (192)
82 3gj0_A GTP-binding nuclear pro 99.8 2.2E-21 7.5E-26 178.1 8.9 141 282-429 12-152 (221)
83 4djt_A GTP-binding nuclear pro 99.8 7.3E-21 2.5E-25 174.0 12.4 142 283-429 9-152 (218)
84 1dtl_A Cardiac troponin C; hel 99.8 9.3E-21 3.2E-25 164.3 11.6 153 41-239 2-158 (161)
85 3qrx_A Centrin; calcium-bindin 99.8 1.5E-20 5.1E-25 164.5 12.8 145 47-240 18-165 (169)
86 3bwd_D RAC-like GTP-binding pr 99.8 3.7E-21 1.3E-25 170.3 8.1 140 283-429 6-158 (182)
87 4gzl_A RAS-related C3 botulinu 99.8 3.3E-20 1.1E-24 168.3 14.3 140 283-429 28-182 (204)
88 2fv8_A H6, RHO-related GTP-bin 99.8 4.1E-20 1.4E-24 167.9 14.7 139 284-429 24-177 (207)
89 3fwb_A Cell division control p 99.8 3.1E-20 1.1E-24 160.8 12.7 143 48-239 14-159 (161)
90 3t1o_A Gliding protein MGLA; G 99.8 6E-21 2E-25 171.0 8.3 139 283-429 12-169 (198)
91 4bas_A ADP-ribosylation factor 99.8 1.3E-19 4.3E-24 162.9 16.7 124 281-410 13-142 (199)
92 2zej_A Dardarin, leucine-rich 99.8 7.9E-21 2.7E-25 169.4 8.6 137 285-427 2-148 (184)
93 2h57_A ADP-ribosylation factor 99.8 1.2E-19 4.1E-24 162.2 16.2 132 283-421 19-151 (190)
94 3ox6_A Calcium-binding protein 99.8 2.1E-20 7.1E-25 160.2 10.5 145 49-238 3-151 (153)
95 1zd9_A ADP-ribosylation factor 99.8 6.6E-20 2.3E-24 163.9 13.4 124 279-410 16-139 (188)
96 2bl0_C Myosin regulatory light 99.8 2E-20 6.7E-25 158.8 9.4 137 52-238 1-140 (142)
97 2f9l_A RAB11B, member RAS onco 99.8 2E-19 6.9E-24 162.3 15.8 141 284-429 4-145 (199)
98 4ds7_A Calmodulin, CAM; protei 99.8 6E-20 2E-24 156.4 11.6 140 49-238 3-145 (147)
99 1f6b_A SAR1; gtpases, N-termin 99.8 1.9E-19 6.5E-24 162.5 15.2 131 283-423 23-153 (198)
100 2mys_B Myosin; muscle protein, 99.8 9.2E-20 3.1E-24 159.2 12.6 151 32-239 4-158 (166)
101 1m2o_B GTP-binding protein SAR 99.8 2.2E-19 7.7E-24 160.9 15.4 129 284-422 22-150 (190)
102 1ksh_A ARF-like protein 2; sma 99.8 4.1E-19 1.4E-23 158.0 16.3 119 283-410 16-134 (186)
103 2h17_A ADP-ribosylation factor 99.8 1.5E-19 5.2E-24 160.4 13.1 122 280-410 16-137 (181)
104 1upt_A ARL1, ADP-ribosylation 99.8 3E-19 1E-23 156.1 14.6 119 283-410 5-123 (171)
105 1y1x_A Leishmania major homolo 99.8 6.1E-20 2.1E-24 164.7 10.3 146 37-240 9-157 (191)
106 2jnf_A Troponin C; stretch act 99.8 4E-20 1.4E-24 159.9 8.6 147 48-239 4-154 (158)
107 1r8s_A ADP-ribosylation factor 99.8 2.3E-19 7.9E-24 155.9 12.9 116 286-410 1-116 (164)
108 2f2o_A Calmodulin fused with c 99.8 1E-19 3.5E-24 160.8 10.6 143 49-240 3-148 (179)
109 2ccm_A Calexcitin; EF hand, ca 99.8 1.4E-19 4.8E-24 161.7 11.5 152 48-239 3-170 (191)
110 3j04_B Myosin regulatory light 99.8 3.8E-20 1.3E-24 157.2 7.4 136 51-239 1-139 (143)
111 1nya_A Calerythrin; EF-hand, m 99.8 8.4E-20 2.9E-24 160.5 9.4 147 51-239 1-163 (176)
112 3k21_A PFCDPK3, calcium-depend 99.8 7.9E-20 2.7E-24 164.1 9.2 139 49-239 44-190 (191)
113 1zj6_A ADP-ribosylation factor 99.8 2.1E-19 7.3E-24 160.2 11.8 128 283-420 14-141 (187)
114 1top_A Troponin C; contractIle 99.8 2.3E-19 7.8E-24 155.5 11.4 145 49-239 12-159 (162)
115 2hpk_A Photoprotein berovin; s 99.8 7.5E-20 2.6E-24 166.1 8.5 153 49-240 28-190 (208)
116 2sas_A Sarcoplasmic calcium-bi 99.8 2.9E-19 1E-23 158.1 12.1 149 51-239 2-166 (185)
117 1oix_A RAS-related protein RAB 99.8 5.1E-19 1.7E-23 158.8 13.5 142 283-429 27-169 (191)
118 2mys_C Myosin; muscle protein, 99.8 4E-19 1.4E-23 151.6 12.2 144 50-239 1-147 (149)
119 2ovk_C Myosin catalytic light 99.8 3.8E-20 1.3E-24 160.5 5.7 144 50-241 2-152 (159)
120 2aao_A CDPK, calcium-dependent 99.8 3E-19 1E-23 155.6 11.4 141 50-240 20-161 (166)
121 3sjs_A URE3-BP sequence specif 99.8 9.3E-20 3.2E-24 167.6 8.3 138 47-241 41-181 (220)
122 1fzq_A ADP-ribosylation factor 99.8 6.6E-19 2.2E-23 156.5 13.3 119 283-410 14-132 (181)
123 2lvv_A Flagellar calcium-bindi 99.8 2.1E-19 7.2E-24 165.8 9.9 148 49-239 43-197 (226)
124 3pm8_A PFCDPK2, calcium-depend 99.8 2.3E-20 8E-25 168.5 3.4 141 49-239 49-194 (197)
125 3r7w_A Gtpase1, GTP-binding pr 99.8 5.5E-19 1.9E-23 170.7 13.2 140 284-429 2-159 (307)
126 2b6h_A ADP-ribosylation factor 99.8 5.5E-19 1.9E-23 158.6 12.3 119 283-410 27-145 (192)
127 3th5_A RAS-related C3 botulinu 99.7 8E-21 2.7E-25 172.0 0.0 140 283-429 28-182 (204)
128 2wkq_A NPH1-1, RAS-related C3 99.8 1.4E-18 4.9E-23 168.8 15.7 141 282-429 152-307 (332)
129 1wdc_C Scallop myosin; calcium 99.8 6.2E-20 2.1E-24 158.4 5.4 142 50-240 2-150 (156)
130 1s6i_A CDPK, calcium-dependent 99.8 5.5E-20 1.9E-24 164.8 4.8 141 49-239 2-143 (188)
131 3e3r_A Calcyphosin, calcyphosi 99.8 2.4E-19 8.2E-24 161.8 8.7 141 52-242 32-183 (204)
132 1w7j_B Myosin light chain 1; m 99.8 1.6E-20 5.3E-25 161.2 0.7 141 50-238 3-148 (151)
133 1qv0_A Obelin, OBL; photoprote 99.8 3.2E-19 1.1E-23 159.7 9.2 153 48-239 11-176 (195)
134 3akb_A Putative calcium bindin 99.8 3.2E-19 1.1E-23 155.1 8.8 143 55-239 2-159 (166)
135 3llu_A RAS-related GTP-binding 99.8 1.6E-19 5.6E-24 162.5 7.1 143 280-429 15-175 (196)
136 2fh5_B SR-beta, signal recogni 99.8 2.8E-18 9.6E-23 156.3 14.4 125 283-412 5-132 (214)
137 1wdc_B Scallop myosin; calcium 99.8 6.3E-19 2.2E-23 152.2 9.6 138 48-239 9-149 (156)
138 2x77_A ADP-ribosylation factor 99.8 1.1E-18 3.8E-23 155.7 11.5 119 283-410 20-138 (189)
139 2ovk_B RLC, myosin regulatory 99.8 2E-19 6.8E-24 154.8 6.4 140 46-239 5-147 (153)
140 1q80_A SCP, sarcoplasmic calci 99.8 6.5E-19 2.2E-23 154.6 9.1 148 52-239 1-155 (174)
141 1uhk_A Aequorin 2, aequorin; E 99.8 8.6E-19 3E-23 156.2 9.8 153 48-239 7-172 (191)
142 1moz_A ARL1, ADP-ribosylation 99.8 2.2E-18 7.4E-23 152.6 12.2 119 283-410 16-134 (183)
143 3mse_B Calcium-dependent prote 99.8 6.3E-19 2.1E-23 156.5 8.6 135 52-239 34-177 (180)
144 2bl0_B Myosin regulatory light 99.8 7.1E-19 2.4E-23 149.4 8.5 135 51-239 2-139 (145)
145 2znd_A Programmed cell death p 99.8 4.6E-19 1.6E-23 155.8 7.2 131 55-240 5-138 (172)
146 1alv_A Calpain, S-camld; calci 99.8 6.7E-19 2.3E-23 155.0 8.2 129 55-240 2-140 (173)
147 3dtp_E RLC, myosin regulatory 99.8 2.9E-19 1E-23 161.0 5.8 137 49-239 49-188 (196)
148 3r7w_B Gtpase2, GTP-binding pr 99.8 3.1E-19 1.1E-23 171.7 6.0 132 287-429 1-152 (331)
149 1m45_A MLC1P, myosin light cha 99.8 1.1E-19 3.7E-24 155.4 2.2 141 55-239 2-146 (148)
150 3cs1_A Flagellar calcium-bindi 99.8 9.5E-19 3.2E-23 160.5 8.3 148 49-239 40-194 (219)
151 2bec_A Calcineurin B homologou 99.8 7.3E-19 2.5E-23 158.8 7.0 156 48-240 20-183 (202)
152 2wji_A Ferrous iron transport 99.7 2.6E-18 8.8E-23 150.2 9.8 131 285-429 3-142 (165)
153 3c5h_A Glucocorticoid receptor 99.7 2.9E-19 9.7E-24 168.1 3.2 145 280-429 14-232 (255)
154 3khe_A Calmodulin-like domain 99.7 3.7E-19 1.3E-23 158.7 3.2 140 52-240 35-185 (191)
155 3ll8_B Calcineurin subunit B t 99.7 1.3E-18 4.3E-23 149.6 6.3 137 52-241 1-145 (155)
156 3q5i_A Protein kinase; CDPK, m 99.7 2.2E-18 7.5E-23 177.7 9.2 142 50-240 348-497 (504)
157 3mwu_A Calmodulin-domain prote 99.7 1E-17 3.5E-22 171.8 11.3 140 51-239 325-480 (486)
158 3lij_A Calcium/calmodulin depe 99.7 4.4E-18 1.5E-22 174.9 8.3 141 51-240 340-488 (494)
159 1nrj_B SR-beta, signal recogni 99.7 3.2E-18 1.1E-22 156.4 6.3 136 283-429 10-161 (218)
160 3sg6_A Gcamp2, myosin light ch 99.7 6.7E-18 2.3E-22 169.2 8.9 143 48-239 303-448 (450)
161 1ggw_A Protein (CDC4P); light 99.7 2.6E-18 8.8E-23 145.4 4.9 132 56-239 4-138 (140)
162 2ged_A SR-beta, signal recogni 99.7 5.2E-18 1.8E-22 151.7 6.8 130 283-423 46-184 (193)
163 1jfj_A Ehcabp, calcium-binding 99.7 4.4E-18 1.5E-22 142.0 5.9 132 58-238 1-133 (134)
164 1ij5_A Plasmodial specific LAV 99.7 2.5E-17 8.4E-22 160.2 12.1 175 48-239 113-317 (323)
165 3o47_A ADP-ribosylation factor 99.7 1.8E-17 6.1E-22 161.6 10.7 120 283-411 163-282 (329)
166 2wjg_A FEOB, ferrous iron tran 99.7 1.4E-17 4.6E-22 148.2 8.3 133 284-429 6-146 (188)
167 3nyv_A Calmodulin-domain prote 99.7 1.2E-17 4.1E-22 171.2 8.7 140 51-239 329-479 (484)
168 2ct9_A Calcium-binding protein 99.7 9.4E-18 3.2E-22 152.3 6.7 155 48-240 20-182 (208)
169 2lkc_A Translation initiation 99.7 7.4E-17 2.5E-21 141.9 12.3 113 283-409 6-121 (178)
170 2qu8_A Putative nucleolar GTP- 99.7 1.1E-16 3.6E-21 147.6 13.8 138 283-429 27-182 (228)
171 1gjy_A Sorcin, CP-22, V19; cal 99.7 5.7E-17 2E-21 141.7 10.7 123 61-241 5-135 (167)
172 2cxx_A Probable GTP-binding pr 99.7 4.1E-17 1.4E-21 145.1 9.9 131 286-428 2-153 (190)
173 1juo_A Sorcin; calcium-binding 99.7 8.3E-18 2.8E-22 151.5 5.2 132 51-241 27-166 (198)
174 3lvq_E ARF-GAP with SH3 domain 99.7 1.4E-16 4.8E-21 163.9 15.1 119 283-410 320-438 (497)
175 2l2e_A Calcium-binding protein 99.7 4.2E-17 1.4E-21 145.4 8.5 143 48-239 5-174 (190)
176 2qac_A Myosin A tail domain in 99.7 1.2E-17 4.2E-22 142.4 4.8 133 52-238 9-144 (146)
177 1k94_A Grancalcin; penta-EF-ha 99.7 6.5E-17 2.2E-21 141.0 9.6 122 61-240 3-132 (165)
178 1jba_A GCAP-2, protein (guanyl 99.7 3.1E-17 1.1E-21 148.2 7.4 140 50-239 15-175 (204)
179 2zfd_A Calcineurin B-like prot 99.7 6.5E-17 2.2E-21 148.9 9.1 141 48-239 39-193 (226)
180 1svi_A GTP-binding protein YSX 99.7 2.3E-16 8E-21 141.0 12.3 117 283-411 21-150 (195)
181 2dyk_A GTP-binding protein; GT 99.7 7.1E-17 2.4E-21 139.5 8.3 126 286-426 2-135 (161)
182 3a1s_A Iron(II) transport prot 99.7 7.2E-17 2.5E-21 151.9 8.8 136 283-429 3-144 (258)
183 2be4_A Hypothetical protein LO 99.7 1.2E-16 4.1E-21 150.4 10.3 188 49-241 3-225 (272)
184 2ehb_A Calcineurin B-like prot 99.7 8.6E-17 2.9E-21 145.6 8.9 141 49-239 29-182 (207)
185 3a8r_A Putative uncharacterize 99.7 3.7E-17 1.3E-21 145.3 6.3 135 54-240 25-170 (179)
186 2i7a_A Calpain 13; calcium-dep 99.7 6.8E-17 2.3E-21 142.9 7.9 116 67-239 14-141 (174)
187 3iev_A GTP-binding protein ERA 99.7 4.6E-16 1.6E-20 150.2 14.4 135 282-425 7-153 (308)
188 3iby_A Ferrous iron transport 99.7 2.8E-17 9.4E-22 154.5 5.2 131 286-429 2-144 (256)
189 1s6c_A KV4 potassium channel-i 99.7 1.5E-16 5E-21 141.0 9.5 140 49-239 13-167 (183)
190 2gj8_A MNME, tRNA modification 99.7 1.6E-16 5.4E-21 140.0 9.2 120 284-409 3-129 (172)
191 3i8s_A Ferrous iron transport 99.7 7.1E-17 2.4E-21 153.3 6.9 134 285-429 3-146 (274)
192 3dd4_A KV channel-interacting 99.7 3.4E-16 1.2E-20 144.5 10.6 139 50-239 60-213 (229)
193 2f33_A Calbindin; EF-hand, Ca2 99.6 2.6E-16 9E-21 147.3 9.5 142 56-238 102-258 (263)
194 3dpu_A RAB family protein; roc 99.6 1.1E-16 3.9E-21 166.0 7.5 139 282-429 38-185 (535)
195 2f33_A Calbindin; EF-hand, Ca2 99.6 2.5E-17 8.6E-22 154.2 1.4 183 48-239 7-218 (263)
196 1dgu_A Calcium-saturated CIB; 99.6 2.2E-16 7.4E-21 140.1 7.4 141 46-239 9-170 (183)
197 3b1v_A Ferrous iron uptake tra 99.6 1.1E-16 3.9E-21 151.5 5.5 131 285-429 3-141 (272)
198 2r2i_A Guanylyl cyclase-activa 99.6 4.4E-17 1.5E-21 146.6 2.4 139 51-239 8-158 (198)
199 2d8n_A Recoverin; structural g 99.6 3.5E-16 1.2E-20 141.6 7.5 133 58-239 34-184 (207)
200 3pqc_A Probable GTP-binding pr 99.6 1.1E-15 3.8E-20 136.2 10.7 132 283-429 21-171 (195)
201 2hps_A Coelenterazine-binding 99.6 2.6E-17 8.7E-22 146.2 -0.3 147 49-239 6-165 (186)
202 1s1e_A KV channel interacting 99.6 9.2E-16 3.1E-20 141.2 9.9 139 50-239 47-200 (224)
203 1g8i_A Frequenin, neuronal cal 99.6 2.4E-16 8.2E-21 140.4 5.6 134 57-239 25-174 (190)
204 3lxx_A GTPase IMAP family memb 99.6 3.5E-15 1.2E-19 138.5 13.3 138 282-428 26-185 (239)
205 3k53_A Ferrous iron transport 99.6 4.7E-16 1.6E-20 147.3 7.4 133 285-429 3-143 (271)
206 2ggz_A Guanylyl cyclase-activa 99.6 5.6E-17 1.9E-21 147.7 0.9 135 55-239 17-162 (211)
207 1bjf_A Neurocalcin delta; calc 99.6 3.9E-16 1.3E-20 139.3 5.2 164 50-229 21-193 (193)
208 2l4h_A Calcium and integrin-bi 99.6 7.7E-16 2.6E-20 140.7 6.7 139 48-239 42-201 (214)
209 4dhe_A Probable GTP-binding pr 99.6 3.1E-15 1.1E-19 136.8 10.3 120 283-411 27-160 (223)
210 1fpw_A Yeast frequenin, calciu 99.6 4.7E-16 1.6E-20 138.5 4.6 138 50-239 21-174 (190)
211 3bow_A Calpain-2 catalytic sub 99.6 1E-15 3.6E-20 163.6 7.8 132 50-238 524-666 (714)
212 3gee_A MNME, tRNA modification 99.6 7.3E-15 2.5E-19 149.5 11.6 122 283-411 231-359 (476)
213 1wf3_A GTP-binding protein; GT 99.6 1.3E-14 4.4E-19 139.5 12.7 116 285-410 7-132 (301)
214 2be4_A Hypothetical protein LO 99.6 3E-15 1E-19 140.7 7.8 182 50-239 49-267 (272)
215 2jul_A Calsenilin; EF-hand, ca 99.6 2.2E-15 7.7E-20 141.3 6.8 138 50-239 87-240 (256)
216 1lnz_A SPO0B-associated GTP-bi 99.6 8.4E-15 2.9E-19 143.0 9.9 135 286-425 159-301 (342)
217 3lxw_A GTPase IMAP family memb 99.5 1.8E-14 6E-19 134.6 10.7 141 283-428 19-179 (247)
218 2hjg_A GTP-binding protein ENG 99.5 1.2E-14 4.1E-19 147.0 9.8 119 283-411 173-302 (436)
219 3qq5_A Small GTP-binding prote 99.5 5.9E-15 2E-19 147.8 5.3 136 283-429 32-173 (423)
220 2e87_A Hypothetical protein PH 99.5 2.4E-13 8.3E-18 133.8 15.9 138 283-429 165-313 (357)
221 2xtp_A GTPase IMAP family memb 99.5 2.4E-13 8.2E-18 127.6 14.8 139 283-427 20-178 (260)
222 1h65_A Chloroplast outer envel 99.5 1.1E-13 3.9E-18 130.8 12.5 125 283-410 37-169 (270)
223 1sjj_A Actinin; 3-helix bundle 99.5 8.3E-15 2.8E-19 160.5 5.2 136 48-238 716-857 (863)
224 1mky_A Probable GTP-binding pr 99.5 9.9E-14 3.4E-18 140.4 11.9 111 286-409 2-124 (439)
225 4dcu_A GTP-binding protein ENG 99.5 4.8E-14 1.6E-18 143.4 9.6 132 283-424 193-336 (456)
226 1ega_A Protein (GTP-binding pr 99.5 1.2E-13 4E-18 132.8 11.3 132 285-426 8-148 (301)
227 2hjg_A GTP-binding protein ENG 99.5 4.2E-14 1.4E-18 143.0 8.4 113 286-410 4-126 (436)
228 1xzp_A Probable tRNA modificat 99.5 2.7E-14 9.2E-19 145.5 7.0 127 283-421 241-375 (482)
229 3def_A T7I23.11 protein; chlor 99.5 1.3E-13 4.5E-18 129.8 11.2 121 283-409 34-165 (262)
230 1qxp_A MU-like calpain; M-calp 99.5 6E-14 2E-18 154.1 9.0 171 56-241 606-803 (900)
231 2qtf_A Protein HFLX, GTP-bindi 99.5 4.1E-13 1.4E-17 132.2 13.9 132 285-424 178-323 (364)
232 2lv7_A Calcium-binding protein 99.5 1.8E-13 6E-18 109.4 8.6 72 47-125 26-98 (100)
233 3sjy_A Translation initiation 99.4 5E-13 1.7E-17 133.7 13.7 117 282-411 5-145 (403)
234 2qag_A Septin-2, protein NEDD5 99.4 4.3E-14 1.5E-18 139.2 5.6 140 283-429 35-211 (361)
235 1djx_A PLC-D1, phosphoinositid 99.4 9.9E-15 3.4E-19 153.1 0.7 127 57-237 11-146 (624)
236 3geh_A MNME, tRNA modification 99.4 9.2E-14 3.1E-18 140.9 6.9 118 282-410 221-345 (462)
237 1qxp_A MU-like calpain; M-calp 99.4 1.5E-14 5.1E-19 158.9 1.1 132 51-239 527-669 (900)
238 4dcu_A GTP-binding protein ENG 99.4 9.8E-14 3.4E-18 141.1 7.0 115 285-409 23-145 (456)
239 2pvb_A Protein (parvalbumin); 99.4 1.4E-13 4.7E-18 111.1 6.1 100 86-239 2-107 (108)
240 3t5d_A Septin-7; GTP-binding p 99.4 1E-12 3.5E-17 124.5 12.9 139 284-429 7-181 (274)
241 3fs7_A Parvalbumin, thymic; ca 99.4 1.4E-13 4.8E-18 111.3 5.9 100 87-239 3-108 (109)
242 3p26_A Elongation factor 1 alp 99.4 3E-13 1E-17 138.5 9.3 136 282-426 30-207 (483)
243 3j2k_7 ERF3, eukaryotic polype 99.4 1.5E-12 5.1E-17 131.6 13.5 135 282-426 14-193 (439)
244 1pva_A Parvalbumin; calcium bi 99.4 1.2E-13 4.3E-18 111.7 4.2 101 86-239 2-108 (110)
245 2i7a_A Calpain 13; calcium-dep 99.4 1.2E-12 4.1E-17 115.5 10.7 62 57-126 76-141 (174)
246 1bu3_A Calcium-binding protein 99.4 1.2E-13 4.2E-18 111.6 3.9 101 86-239 2-108 (109)
247 1s0u_A EIF-2-gamma, translatio 99.4 6.4E-12 2.2E-16 125.9 17.3 130 283-423 6-166 (408)
248 1jny_A EF-1-alpha, elongation 99.4 7.9E-13 2.7E-17 133.6 10.4 133 283-425 4-181 (435)
249 4fid_A G protein alpha subunit 99.4 1.7E-12 5.7E-17 125.9 12.2 79 325-409 154-242 (340)
250 3ohm_A Guanine nucleotide-bind 99.4 1.2E-12 4.1E-17 126.5 11.1 91 326-422 161-278 (327)
251 2c78_A Elongation factor TU-A; 99.4 5.8E-13 2E-17 133.3 8.9 135 283-426 9-163 (405)
252 1d2e_A Elongation factor TU (E 99.4 1.4E-12 4.9E-17 130.1 11.3 134 284-426 2-154 (397)
253 1cip_A Protein (guanine nucleo 99.4 1.3E-12 4.5E-17 127.9 10.3 87 333-423 192-304 (353)
254 2znd_A Programmed cell death p 99.4 2.8E-12 9.7E-17 112.1 11.5 53 59-124 46-99 (172)
255 1zun_B Sulfate adenylate trans 99.4 2.3E-12 8E-17 130.1 12.0 133 283-425 22-192 (434)
256 1kk1_A EIF2gamma; initiation o 99.4 5.9E-12 2E-16 126.2 14.9 130 283-423 8-168 (410)
257 1rro_A RAT oncomodulin; calciu 99.4 3.1E-13 1.1E-17 109.0 4.5 99 87-238 2-106 (108)
258 2zkm_X 1-phosphatidylinositol- 99.4 1.7E-13 6E-18 147.0 3.7 132 55-238 144-295 (799)
259 1wb1_A Translation elongation 99.4 2.3E-12 7.7E-17 131.7 11.5 127 284-424 18-157 (482)
260 1alv_A Calpain, S-camld; calci 99.4 1.8E-12 6.1E-17 113.6 9.1 55 58-125 48-103 (173)
261 3cb4_D GTP-binding protein LEP 99.4 2.2E-12 7.5E-17 134.5 11.2 134 284-427 3-154 (599)
262 3izy_P Translation initiation 99.3 3.8E-14 1.3E-18 145.7 -2.4 116 285-410 4-119 (537)
263 5pal_A Parvalbumin; calcium-bi 99.3 3.7E-13 1.3E-17 108.7 3.9 99 88-239 3-107 (109)
264 1rwy_A Parvalbumin alpha; EF-h 99.3 1.4E-13 5E-18 111.1 1.4 99 88-239 3-107 (109)
265 4drw_A Protein S100-A10/annexi 99.3 2.3E-12 8E-17 106.1 8.4 69 53-128 11-84 (121)
266 3tr5_A RF-3, peptide chain rel 99.3 1.5E-12 5E-17 134.2 8.5 132 284-427 12-165 (528)
267 3izq_1 HBS1P, elongation facto 99.3 4.6E-12 1.6E-16 132.8 11.9 136 282-426 164-341 (611)
268 1mky_A Probable GTP-binding pr 99.3 4.6E-12 1.6E-16 128.1 11.3 118 284-410 179-307 (439)
269 2ywe_A GTP-binding protein LEP 99.3 1.2E-11 4.1E-16 128.7 14.4 133 284-426 5-155 (600)
270 1y1x_A Leishmania major homolo 99.3 7.6E-12 2.6E-16 111.6 11.2 123 57-239 63-188 (191)
271 2kyc_A Parvalbumin-3, parvalbu 99.3 2.3E-13 7.9E-18 109.8 1.0 99 87-238 2-106 (108)
272 2aka_B Dynamin-1; fusion prote 99.3 6E-12 2E-16 120.3 10.4 120 283-411 24-208 (299)
273 1r5b_A Eukaryotic peptide chai 99.3 4E-12 1.4E-16 129.4 9.2 134 283-426 41-220 (467)
274 1k94_A Grancalcin; penta-EF-ha 99.3 7.2E-12 2.5E-16 108.7 9.6 60 57-125 70-130 (165)
275 2jjz_A Ionized calcium-binding 99.3 4.2E-12 1.4E-16 109.1 7.8 67 53-126 46-113 (150)
276 1pui_A ENGB, probable GTP-bind 99.3 5.4E-12 1.8E-16 114.0 8.8 129 283-425 24-170 (210)
277 1f60_A Elongation factor EEF1A 99.3 5.2E-12 1.8E-16 128.3 9.4 134 283-426 5-181 (458)
278 3t34_A Dynamin-related protein 99.3 5.8E-12 2E-16 124.1 9.0 138 284-429 33-238 (360)
279 3avx_A Elongation factor TS, e 99.3 5.9E-12 2E-16 137.5 9.6 135 283-426 294-447 (1289)
280 2h5e_A Peptide chain release f 99.3 8.5E-12 2.9E-16 128.6 10.3 131 284-426 12-164 (529)
281 1wxq_A GTP-binding protein; st 99.3 1.7E-11 6E-16 121.9 11.8 87 286-372 1-114 (397)
282 1ij5_A Plasmodial specific LAV 99.3 3.4E-12 1.2E-16 123.8 6.5 130 54-206 185-318 (323)
283 3nso_A Protein S100-A3; EF-han 99.3 1.2E-11 4.2E-16 98.6 8.4 70 53-128 6-82 (101)
284 2ggz_A Guanylyl cyclase-activa 99.3 2.5E-11 8.4E-16 110.1 11.7 133 52-239 52-185 (211)
285 2d8n_A Recoverin; structural g 99.3 4.3E-12 1.5E-16 114.4 6.5 126 65-240 7-135 (207)
286 1wy9_A Allograft inflammatory 99.3 3.1E-12 1.1E-16 109.5 5.3 70 48-125 40-110 (147)
287 1gjy_A Sorcin, CP-22, V19; cal 99.3 9.3E-12 3.2E-16 108.3 8.2 60 57-125 72-132 (167)
288 1zo1_I IF2, translation initia 99.3 1.3E-12 4.5E-17 133.1 2.8 112 284-409 3-117 (501)
289 2qpt_A EH domain-containing pr 99.3 9E-12 3.1E-16 129.1 9.1 120 283-410 63-233 (550)
290 2qag_C Septin-7; cell cycle, c 99.3 2.3E-11 7.8E-16 121.5 11.7 140 283-429 29-204 (418)
291 3h4s_E KCBP interacting Ca2+-b 99.2 1.6E-12 5.5E-17 109.6 2.8 98 96-241 5-106 (135)
292 1g7s_A Translation initiation 99.2 6E-12 2.1E-16 131.2 7.1 109 285-409 5-136 (594)
293 2j69_A Bacterial dynamin-like 99.2 2.3E-11 7.7E-16 129.6 11.5 121 282-410 66-245 (695)
294 2ktg_A Calmodulin, putative; e 99.2 2.1E-11 7.1E-16 93.6 8.3 73 48-127 5-78 (85)
295 1bjf_A Neurocalcin delta; calc 99.2 6.3E-12 2.2E-16 111.8 5.9 155 69-239 3-174 (193)
296 2joj_A Centrin protein; N-term 99.2 2.6E-11 8.8E-16 91.2 8.4 71 51-128 1-72 (77)
297 3n22_A Protein S100-A2; EF-han 99.2 4.3E-11 1.5E-15 95.0 9.9 69 53-127 7-82 (98)
298 1fpw_A Yeast frequenin, calciu 99.2 6E-11 2E-15 105.1 11.9 113 58-208 64-177 (190)
299 1fi6_A EH domain protein REPS1 99.2 2.6E-11 9E-16 95.1 8.2 70 50-128 2-72 (92)
300 4eto_A Protein S100-A4; calciu 99.2 4.5E-11 1.5E-15 93.9 9.5 69 53-127 6-81 (93)
301 1jwy_B Dynamin A GTPase domain 99.2 1.9E-11 6.5E-16 117.8 9.0 119 283-411 22-214 (315)
302 3sjs_A URE3-BP sequence specif 99.2 2.4E-11 8.1E-16 111.2 9.1 120 57-237 87-214 (220)
303 2h2k_A Protein S100-A13; calci 99.2 1.6E-11 5.5E-16 98.9 6.7 72 52-129 17-92 (106)
304 3zwh_A Protein S100-A4; Ca-bin 99.2 5.7E-11 2E-15 95.3 9.7 70 52-127 8-84 (104)
305 2elf_A Protein translation elo 99.2 7.8E-12 2.7E-16 123.4 5.5 118 287-425 23-145 (370)
306 2kn2_A Calmodulin; S MAPK phos 99.2 8E-11 2.7E-15 91.8 10.3 71 50-127 2-73 (92)
307 1juo_A Sorcin; calcium-binding 99.2 2.6E-11 8.8E-16 108.7 8.5 44 58-102 104-147 (198)
308 2lnk_A Protein S100-A4; EF-han 99.2 6.2E-11 2.1E-15 96.5 9.8 71 51-127 16-93 (113)
309 1avs_A Troponin C; muscle cont 99.2 6.7E-11 2.3E-15 92.0 9.5 73 49-128 12-85 (90)
310 1c07_A Protein (epidermal grow 99.2 3E-11 1E-15 95.3 7.5 70 50-128 3-73 (95)
311 2r2i_A Guanylyl cyclase-activa 99.2 6E-11 2E-15 106.1 10.4 112 52-206 47-159 (198)
312 1xk4_C Calgranulin B; S100 fam 99.2 7.8E-11 2.7E-15 96.1 9.8 68 53-126 8-83 (113)
313 3nxa_A Protein S100-A16; S100 99.2 8.9E-11 3E-15 93.5 9.7 71 53-129 7-85 (100)
314 2dy1_A Elongation factor G; tr 99.2 6.7E-11 2.3E-15 125.4 11.7 132 283-425 7-154 (665)
315 2l2e_A Calcium-binding protein 99.2 1.1E-10 3.8E-15 103.5 11.3 114 57-208 63-177 (190)
316 2lv7_A Calcium-binding protein 99.2 1.2E-11 4.1E-16 98.7 4.4 69 169-237 27-97 (100)
317 2opo_A Polcalcin CHE A 3; calc 99.2 5.2E-11 1.8E-15 91.6 7.9 70 49-126 3-73 (86)
318 2kgr_A Intersectin-1; structur 99.2 7.3E-11 2.5E-15 96.0 8.9 72 48-128 5-77 (111)
319 1j7q_A CAVP, calcium vector pr 99.2 6.6E-11 2.2E-15 91.1 8.2 74 48-129 5-82 (86)
320 1dar_A EF-G, elongation factor 99.2 4.4E-11 1.5E-15 127.3 9.7 129 283-425 10-158 (691)
321 3mca_A HBS1, elongation factor 99.2 6E-12 2E-16 131.6 2.7 118 282-409 174-329 (592)
322 1jal_A YCHF protein; nucleotid 99.2 1.5E-10 5.1E-15 113.2 12.4 86 286-371 3-108 (363)
323 2ehb_A Calcineurin B-like prot 99.2 8.7E-11 3E-15 105.8 9.8 142 47-235 52-207 (207)
324 1n0u_A EF-2, elongation factor 99.2 4.7E-11 1.6E-15 129.6 9.3 118 283-409 17-164 (842)
325 1jba_A GCAP-2, protein (guanyl 99.2 2.7E-10 9.3E-15 102.3 12.8 117 58-207 60-177 (204)
326 2xex_A Elongation factor G; GT 99.2 1.4E-10 4.7E-15 123.5 12.2 131 283-425 8-156 (693)
327 2pmy_A RAS and EF-hand domain- 99.1 6.5E-11 2.2E-15 92.5 7.1 71 47-126 17-88 (91)
328 2zfd_A Calcineurin B-like prot 99.1 2.2E-10 7.4E-15 105.0 11.6 144 47-237 63-220 (226)
329 2rdo_7 EF-G, elongation factor 99.1 3.3E-10 1.1E-14 120.7 14.5 119 283-410 8-149 (704)
330 1iq3_A Ralbp1-interacting prot 99.1 2.1E-11 7.3E-16 98.9 3.8 72 47-127 12-84 (110)
331 1eh2_A EPS15; calcium binding, 99.1 1.5E-10 5.1E-15 93.2 8.6 69 49-127 7-76 (106)
332 2y5i_A S100Z, S100 calcium bin 99.1 1.9E-10 6.4E-15 91.5 9.1 70 53-128 6-82 (99)
333 1j55_A S-100P protein; metal b 99.1 1.4E-10 4.8E-15 91.5 8.2 69 53-127 5-80 (95)
334 1s6c_A KV4 potassium channel-i 99.1 1.7E-10 5.9E-15 101.5 9.7 112 57-207 56-169 (183)
335 1udx_A The GTP-binding protein 99.1 1.6E-10 5.6E-15 115.2 9.5 139 286-428 158-301 (416)
336 1u0l_A Probable GTPase ENGC; p 99.1 1.6E-11 5.6E-16 117.8 2.2 115 300-429 32-150 (301)
337 2sas_A Sarcoplasmic calcium-bi 99.1 4.2E-10 1.5E-14 98.7 10.7 105 51-206 46-167 (185)
338 2qnr_A Septin-2, protein NEDD5 99.1 6.8E-11 2.3E-15 113.5 5.9 138 284-429 17-192 (301)
339 2wcb_A Protein S100-A12; calci 99.1 9.1E-11 3.1E-15 92.6 5.2 70 52-127 7-83 (95)
340 2jul_A Calsenilin; EF-hand, ca 99.1 3.5E-10 1.2E-14 105.7 10.0 112 58-207 130-242 (256)
341 4a9a_A Ribosome-interacting GT 99.1 4.4E-10 1.5E-14 110.4 11.1 134 285-426 72-222 (376)
342 1s1e_A KV channel interacting 99.1 5E-10 1.7E-14 102.6 10.7 110 58-206 90-201 (224)
343 3rm1_A Protein S100-B; alpha-h 99.1 7E-10 2.4E-14 86.8 10.0 69 53-128 5-81 (92)
344 1g8i_A Frequenin, neuronal cal 99.1 1.8E-10 6E-15 102.0 7.4 112 58-207 64-176 (190)
345 2kax_A Protein S100-A5; EF-han 99.1 2.7E-10 9.2E-15 89.2 7.4 68 53-127 6-78 (92)
346 2x2e_A Dynamin-1; nitration, h 99.1 2E-10 7E-15 112.7 8.0 29 283-311 29-57 (353)
347 2kz2_A Calmodulin, CAM; TR2C, 99.1 7.5E-10 2.6E-14 87.0 9.5 65 55-126 27-92 (94)
348 1yx7_A Calsensin, LAN3-6 antig 99.1 1E-10 3.5E-15 89.3 4.3 71 52-129 2-79 (83)
349 3bow_A Calpain-2 catalytic sub 99.0 2.1E-10 7.4E-15 122.5 8.0 116 58-234 576-692 (714)
350 1qjt_A EH1, epidermal growth f 99.0 1.5E-10 5.2E-15 92.0 5.1 66 54-128 8-74 (99)
351 1nya_A Calerythrin; EF-hand, m 99.0 6.7E-10 2.3E-14 96.7 9.7 101 56-207 57-165 (176)
352 1tiz_A Calmodulin-related prot 99.0 5.2E-10 1.8E-14 81.3 7.4 62 58-126 2-64 (67)
353 1iq3_A Ralbp1-interacting prot 99.0 1E-10 3.5E-15 94.9 3.7 72 170-241 14-85 (110)
354 2d58_A Allograft inflammatory 99.0 7.7E-10 2.6E-14 89.0 8.5 71 48-126 24-95 (107)
355 3ll8_B Calcineurin subunit B t 99.0 2.2E-09 7.5E-14 91.3 11.8 105 58-207 39-145 (155)
356 2dby_A GTP-binding protein; GD 99.0 8.7E-10 3E-14 108.3 10.3 86 286-371 2-111 (368)
357 1k2h_A S100A1, S-100 protein, 99.0 9.7E-10 3.3E-14 85.7 8.6 69 53-127 5-80 (93)
358 3dd4_A KV channel-interacting 99.0 1.3E-09 4.4E-14 100.1 10.7 110 59-206 104-214 (229)
359 1c07_A Protein (epidermal grow 99.0 8.1E-11 2.8E-15 92.8 1.9 69 172-240 4-72 (95)
360 1xk4_A Calgranulin A; S100 fam 99.0 4.4E-10 1.5E-14 88.0 6.2 69 53-127 6-77 (93)
361 1psr_A Psoriasin, S100A7; EF-h 99.0 4.2E-10 1.4E-14 89.6 5.5 68 53-127 6-80 (100)
362 3nso_A Protein S100-A3; EF-han 99.0 7.6E-11 2.6E-15 93.9 1.2 65 175-239 7-80 (101)
363 2jq6_A EH domain-containing pr 99.0 6.5E-10 2.2E-14 93.5 6.8 67 52-128 46-113 (139)
364 3ohm_B 1-phosphatidylinositol- 99.0 1.6E-10 5.4E-15 124.3 3.8 132 56-239 149-300 (885)
365 1zcb_A G alpha I/13; GTP-bindi 99.0 1.2E-09 4.1E-14 107.2 9.6 120 294-421 156-311 (362)
366 2ccm_A Calexcitin; EF hand, ca 99.0 1.6E-09 5.4E-14 96.0 9.5 96 60-206 67-171 (191)
367 3k21_A PFCDPK3, calcium-depend 99.0 3E-09 1E-13 94.8 11.2 101 59-205 89-190 (191)
368 1a4p_A S100A10; S100 family, E 99.0 9.9E-10 3.4E-14 86.7 7.1 69 53-128 5-78 (96)
369 1k9u_A Polcalcin PHL P 7; poll 99.0 1.4E-09 4.8E-14 81.8 7.7 62 57-126 3-65 (78)
370 2xtz_A Guanine nucleotide-bind 99.0 1.1E-09 3.7E-14 107.1 8.9 111 294-410 132-265 (354)
371 1azs_C GS-alpha; complex (lyas 99.0 2E-09 6.9E-14 106.6 10.9 87 316-410 203-299 (402)
372 3qrx_A Centrin; calcium-bindin 99.0 9.8E-10 3.3E-14 95.1 7.6 102 57-207 64-166 (169)
373 3akb_A Putative calcium bindin 99.0 1.3E-09 4.4E-14 93.8 8.3 97 59-206 57-160 (166)
374 3a4u_B Multiple coagulation fa 99.0 1.3E-10 4.6E-15 98.8 1.8 60 179-238 69-142 (143)
375 1bu3_A Calcium-binding protein 99.0 8.1E-10 2.8E-14 88.8 6.4 65 55-125 40-107 (109)
376 2b1u_A Calmodulin-like protein 99.0 4.9E-10 1.7E-14 82.5 4.6 63 56-125 5-68 (71)
377 1rwy_A Parvalbumin alpha; EF-h 99.0 1E-09 3.6E-14 88.1 6.8 66 55-126 39-107 (109)
378 2jnf_A Troponin C; stretch act 99.0 2.9E-09 1E-13 91.0 10.1 100 58-206 51-155 (158)
379 2pvb_A Protein (parvalbumin); 98.9 7.6E-10 2.6E-14 88.8 5.9 66 55-126 39-107 (108)
380 1pva_A Parvalbumin; calcium bi 98.9 7.6E-10 2.6E-14 89.1 5.9 66 55-126 40-108 (110)
381 5pal_A Parvalbumin; calcium-bi 98.9 1.7E-09 5.9E-14 86.9 8.0 66 55-126 39-107 (109)
382 2kgr_A Intersectin-1; structur 98.9 1.8E-10 6.2E-15 93.6 2.1 73 169-241 5-77 (111)
383 3i5g_B Myosin regulatory light 98.9 6.8E-10 2.3E-14 95.5 5.7 62 57-126 85-147 (153)
384 1fi6_A EH domain protein REPS1 98.9 8.9E-11 3E-15 92.0 -0.1 70 172-241 3-72 (92)
385 3h4s_E KCBP interacting Ca2+-b 98.9 4.2E-10 1.4E-14 94.6 3.9 100 59-206 5-105 (135)
386 3li6_A Calcium-binding protein 98.9 4.5E-10 1.5E-14 81.5 3.6 61 59-126 2-63 (66)
387 3n22_A Protein S100-A2; EF-han 98.9 2.5E-10 8.5E-15 90.6 2.3 66 174-239 7-81 (98)
388 3i5g_C Myosin catalytic light 98.9 1.5E-09 5.3E-14 93.9 7.5 65 57-126 85-150 (159)
389 3fs7_A Parvalbumin, thymic; ca 98.9 1.2E-09 4.2E-14 87.8 6.4 65 55-125 40-107 (109)
390 2obh_A Centrin-2; DNA repair c 98.9 1.9E-09 6.6E-14 91.1 7.7 99 58-205 43-142 (143)
391 1c7v_A CAVP, calcium vector pr 98.9 5.9E-10 2E-14 84.6 4.1 66 53-126 5-72 (81)
392 4eto_A Protein S100-A4; calciu 98.9 2.7E-10 9.1E-15 89.5 2.2 66 175-240 7-81 (93)
393 2lhi_A Calmodulin, serine/thre 98.9 1.9E-09 6.5E-14 94.9 7.9 64 55-126 82-146 (176)
394 2bl0_C Myosin regulatory light 98.9 2.4E-09 8.3E-14 89.8 8.2 98 58-205 43-141 (142)
395 1cb1_A Calbindin D9K; calcium- 98.9 9.5E-10 3.3E-14 82.6 5.0 66 55-126 5-74 (78)
396 1qx2_A Vitamin D-dependent cal 98.9 1.8E-09 6.1E-14 80.6 6.4 64 56-126 4-72 (76)
397 1k8u_A S100A6, calcyclin, CACY 98.9 1.7E-09 5.7E-14 83.7 6.4 69 53-127 6-79 (90)
398 1dtl_A Cardiac troponin C; hel 98.9 1.6E-09 5.4E-14 92.9 6.8 100 58-206 56-159 (161)
399 1qjt_A EH1, epidermal growth f 98.9 2.4E-10 8.2E-15 90.9 1.4 64 178-241 11-74 (99)
400 2lmt_A Calmodulin-related prot 98.9 5.3E-09 1.8E-13 89.0 9.9 99 58-205 47-146 (148)
401 2f2o_A Calmodulin fused with c 98.9 2.4E-09 8.1E-14 93.7 7.8 102 58-208 48-150 (179)
402 2bec_A Calcineurin B homologou 98.9 5.4E-09 1.9E-13 93.6 10.3 115 47-206 42-183 (202)
403 1rro_A RAT oncomodulin; calciu 98.9 8.5E-10 2.9E-14 88.5 4.4 65 55-125 39-106 (108)
404 3zwh_A Protein S100-A4; Ca-bin 98.9 3.9E-10 1.4E-14 90.3 2.3 65 175-239 10-83 (104)
405 3fia_A Intersectin-1; EH 1 dom 98.9 5.1E-09 1.8E-13 85.5 8.9 73 46-128 22-95 (121)
406 1exr_A Calmodulin; high resolu 98.9 2.9E-09 9.7E-14 90.4 7.8 99 58-205 47-146 (148)
407 1s6j_A CDPK, calcium-dependent 98.9 6.8E-11 2.3E-15 91.1 -2.3 59 180-238 25-85 (87)
408 1wlz_A DJBP, CAP-binding prote 98.9 3.2E-09 1.1E-13 84.8 7.6 65 55-126 22-87 (105)
409 3nxa_A Protein S100-A16; S100 98.9 9.4E-10 3.2E-14 87.5 4.2 67 175-241 8-84 (100)
410 3fwb_A Cell division control p 98.9 3.8E-09 1.3E-13 90.4 8.3 99 58-205 60-159 (161)
411 2l4h_A Calcium and integrin-bi 98.9 8.7E-09 3E-13 93.6 11.1 107 60-207 94-203 (214)
412 1s6j_A CDPK, calcium-dependent 98.9 4.7E-10 1.6E-14 86.3 2.3 67 51-124 17-84 (87)
413 2pmy_A RAS and EF-hand domain- 98.9 2.4E-10 8.2E-15 89.2 0.5 71 169-239 18-88 (91)
414 2ktg_A Calmodulin, putative; e 98.9 4.6E-10 1.6E-14 86.0 2.0 69 171-239 7-77 (85)
415 2lnk_A Protein S100-A4; EF-han 98.9 9.2E-10 3.2E-14 89.5 3.8 66 174-239 18-92 (113)
416 1jfj_A Ehcabp, calcium-binding 98.9 1.5E-09 5E-14 89.7 5.0 95 57-204 36-133 (134)
417 2joj_A Centrin protein; N-term 98.9 4.1E-10 1.4E-14 84.5 1.2 67 173-239 2-70 (77)
418 1eh2_A EPS15; calcium binding, 98.9 6.2E-10 2.1E-14 89.5 2.2 70 171-241 8-77 (106)
419 1qls_A S100C protein, calgizza 98.9 4.5E-09 1.5E-13 82.9 7.2 68 54-127 10-84 (99)
420 3ox6_A Calcium-binding protein 98.9 2.2E-08 7.6E-13 84.6 12.0 100 58-205 48-152 (153)
421 4ds7_A Calmodulin, CAM; protei 98.8 4.1E-09 1.4E-13 88.6 7.2 98 58-205 48-146 (147)
422 2opo_A Polcalcin CHE A 3; calc 98.8 7.1E-10 2.4E-14 85.2 2.0 70 171-241 4-75 (86)
423 2kld_A Polycystin-2; PC2, PKD2 98.8 4.2E-11 1.5E-15 99.2 -5.4 97 86-238 4-106 (123)
424 1top_A Troponin C; contractIle 98.8 6.4E-09 2.2E-13 89.0 8.2 100 58-206 57-160 (162)
425 1dgu_A Calcium-saturated CIB; 98.8 1.9E-08 6.5E-13 88.4 11.2 107 60-207 63-172 (183)
426 2ohf_A Protein OLA1, GTP-bindi 98.8 2.5E-09 8.5E-14 105.6 5.9 92 283-374 20-131 (396)
427 1yx7_A Calsensin, LAN3-6 antig 98.8 1.3E-09 4.6E-14 82.9 3.2 60 178-237 7-74 (83)
428 2h2k_A Protein S100-A13; calci 98.8 1.6E-09 5.4E-14 87.1 3.7 65 175-239 19-89 (106)
429 1avs_A Troponin C; muscle cont 98.8 1.1E-09 3.7E-14 85.0 2.6 70 171-240 13-84 (90)
430 1j55_A S-100P protein; metal b 98.8 1.4E-09 4.8E-14 85.6 2.8 66 176-241 7-81 (95)
431 1j7q_A CAVP, calcium vector pr 98.8 2.8E-09 9.5E-14 81.8 4.4 68 171-239 7-79 (86)
432 3e3r_A Calcyphosin, calcyphosi 98.8 5.5E-09 1.9E-13 93.3 6.9 107 58-207 74-182 (204)
433 4drw_A Protein S100-A10/annexi 98.8 1.8E-09 6.2E-14 88.7 3.2 67 174-241 11-84 (121)
434 3rm1_A Protein S100-B; alpha-h 98.8 1.8E-09 6E-14 84.5 3.0 66 175-241 6-81 (92)
435 3khe_A Calmodulin-like domain 98.8 1E-08 3.5E-13 90.5 8.4 98 57-206 87-185 (191)
436 2kax_A Protein S100-A5; EF-han 98.8 1.8E-09 6.2E-14 84.4 3.0 65 176-240 8-78 (92)
437 3u0k_A Rcamp; fluorescent prot 98.8 1.1E-08 3.9E-13 100.5 9.0 99 58-205 339-438 (440)
438 2y5i_A S100Z, S100 calcium bin 98.8 1.4E-09 4.8E-14 86.4 1.9 66 176-241 8-82 (99)
439 1xk4_A Calgranulin A; S100 fam 98.8 2.5E-09 8.4E-14 83.7 3.1 66 176-241 8-78 (93)
440 2b1u_A Calmodulin-like protein 98.8 8E-10 2.7E-14 81.4 0.3 63 177-239 5-69 (71)
441 1snl_A Nucleobindin 1, calnuc; 98.8 8.7E-09 3E-13 82.2 6.3 63 58-126 21-99 (103)
442 2jjz_A Ionized calcium-binding 98.8 7.4E-10 2.5E-14 94.9 -0.1 64 177-240 49-114 (150)
443 2wcb_A Protein S100-A12; calci 98.8 1.1E-09 3.9E-14 86.2 0.9 65 175-239 9-82 (95)
444 2wsm_A Hydrogenase expression/ 98.8 4.3E-09 1.5E-13 95.6 4.7 126 284-425 29-185 (221)
445 1m45_A MLC1P, myosin light cha 98.8 6.7E-09 2.3E-13 87.7 5.6 99 58-205 41-146 (148)
446 1uhk_A Aequorin 2, aequorin; E 98.8 1.8E-08 6.2E-13 88.8 8.6 100 58-206 63-173 (191)
447 1wlz_A DJBP, CAP-binding prote 98.8 5.5E-09 1.9E-13 83.4 4.5 63 178-240 24-88 (105)
448 1qv0_A Obelin, OBL; photoprote 98.8 2.3E-08 7.7E-13 88.6 9.0 100 58-206 67-177 (195)
449 2kn2_A Calmodulin; S MAPK phos 98.7 2.4E-09 8.1E-14 83.3 2.2 68 174-241 5-74 (92)
450 3a8r_A Putative uncharacterize 98.7 1.2E-08 4E-13 90.1 6.9 66 55-126 96-169 (179)
451 2hpk_A Photoprotein berovin; s 98.7 2.1E-08 7.1E-13 90.2 8.7 93 63-206 87-190 (208)
452 2kz2_A Calmodulin, CAM; TR2C, 98.7 2.4E-09 8.2E-14 84.0 2.2 63 177-239 28-92 (94)
453 1tiz_A Calmodulin-related prot 98.7 1.7E-09 6E-14 78.5 1.3 60 180-239 3-64 (67)
454 1cb1_A Calbindin D9K; calcium- 98.7 6.1E-09 2.1E-13 78.1 4.3 64 177-240 6-75 (78)
455 3nyv_A Calmodulin-domain prote 98.7 8.9E-09 3.1E-13 105.0 7.0 99 57-207 382-481 (484)
456 2ovk_C Myosin catalytic light 98.7 1.3E-08 4.5E-13 87.2 6.9 64 56-126 84-150 (159)
457 3j04_B Myosin regulatory light 98.7 9.4E-09 3.2E-13 86.2 5.4 63 57-126 76-139 (143)
458 2mys_B Myosin; muscle protein, 98.7 2.1E-08 7E-13 86.6 7.7 63 57-126 95-158 (166)
459 3pm8_A PFCDPK2, calcium-depend 98.7 9.1E-09 3.1E-13 92.1 5.3 101 58-206 94-195 (197)
460 3mse_B Calcium-dependent prote 98.7 5.1E-08 1.7E-12 85.6 9.8 96 58-206 74-178 (180)
461 3vqt_A RF-3, peptide chain rel 98.7 6.3E-08 2.2E-12 100.2 12.0 130 285-426 31-182 (548)
462 2ct9_A Calcium-binding protein 98.7 2.3E-08 7.9E-13 89.9 7.5 66 55-126 111-181 (208)
463 1c7v_A CAVP, calcium vector pr 98.7 2E-09 6.9E-14 81.5 0.4 62 177-239 8-72 (81)
464 2jq6_A EH domain-containing pr 98.7 2E-09 6.9E-14 90.5 0.4 66 175-241 48-113 (139)
465 3q5i_A Protein kinase; CDPK, m 98.7 1.9E-08 6.5E-13 103.2 7.6 98 57-206 399-497 (504)
466 3zvr_A Dynamin-1; hydrolase, D 98.7 5.4E-08 1.8E-12 103.4 11.1 120 283-411 49-233 (772)
467 1h8b_A ACT-EF34, alpha-actinin 98.7 2.8E-08 9.6E-13 74.3 6.4 59 56-125 9-69 (75)
468 3lij_A Calcium/calmodulin depe 98.7 1.8E-08 6.1E-13 103.1 7.2 99 57-207 390-489 (494)
469 1wdc_C Scallop myosin; calcium 98.7 2.6E-08 9.1E-13 84.8 7.1 100 58-207 48-151 (156)
470 1psr_A Psoriasin, S100A7; EF-h 98.7 9.3E-09 3.2E-13 81.7 3.9 64 175-239 7-79 (100)
471 2hf9_A Probable hydrogenase ni 98.7 2.6E-10 8.9E-15 104.2 -6.1 30 283-312 36-65 (226)
472 2ovk_B RLC, myosin regulatory 98.7 2.8E-08 9.4E-13 84.5 6.9 62 57-126 85-147 (153)
473 2kyc_A Parvalbumin-3, parvalbu 98.7 3.2E-09 1.1E-13 85.1 0.9 64 57-126 41-107 (108)
474 1xk4_C Calgranulin B; S100 fam 98.7 5.2E-09 1.8E-13 85.2 2.0 66 176-241 10-85 (113)
475 1ggw_A Protein (CDC4P); light 98.7 3.8E-08 1.3E-12 82.2 7.4 63 56-126 75-138 (140)
476 1q80_A SCP, sarcoplasmic calci 98.6 8.6E-08 3E-12 83.0 9.4 66 55-129 92-158 (174)
477 2bl0_B Myosin regulatory light 98.6 2.5E-08 8.7E-13 83.6 5.7 65 55-126 74-139 (145)
478 1qx2_A Vitamin D-dependent cal 98.6 9.7E-09 3.3E-13 76.5 2.7 63 178-240 5-73 (76)
479 3li6_A Calcium-binding protein 98.6 1E-09 3.5E-14 79.6 -2.7 60 180-239 2-63 (66)
480 1k2h_A S100A1, S-100 protein, 98.6 6.3E-09 2.1E-13 81.0 1.6 65 176-240 7-80 (93)
481 3qr0_A Phospholipase C-beta (P 98.6 7.1E-09 2.4E-13 110.9 2.5 124 65-239 163-307 (816)
482 1qls_A S100C protein, calgizza 98.6 1.1E-08 3.7E-13 80.7 2.9 66 176-241 11-85 (99)
483 3mwu_A Calmodulin-domain prote 98.6 2.2E-08 7.4E-13 102.3 5.9 100 57-206 381-481 (486)
484 2d58_A Allograft inflammatory 98.6 6.6E-09 2.2E-13 83.4 1.2 67 174-240 28-96 (107)
485 1s6i_A CDPK, calcium-dependent 98.6 2.7E-08 9.4E-13 88.2 5.4 98 58-207 47-145 (188)
486 2mys_C Myosin; muscle protein, 98.6 2.1E-07 7.2E-12 78.2 10.7 97 58-205 45-147 (149)
487 3sg6_A Gcamp2, myosin light ch 98.6 8.4E-08 2.9E-12 96.1 9.4 99 58-205 349-448 (450)
488 1wdc_B Scallop myosin; calcium 98.6 5E-08 1.7E-12 83.2 6.8 62 57-126 87-149 (156)
489 3a4u_B Multiple coagulation fa 98.6 2.2E-08 7.4E-13 85.0 4.4 64 56-125 67-142 (143)
490 1k9u_A Polcalcin PHL P 7; poll 98.6 3.7E-09 1.3E-13 79.4 -0.6 62 179-240 4-66 (78)
491 3dtp_E RLC, myosin regulatory 98.6 2.9E-08 1E-12 88.6 5.2 63 56-126 125-188 (196)
492 2www_A Methylmalonic aciduria 98.6 4.5E-08 1.5E-12 95.7 6.9 60 334-409 167-226 (349)
493 1snl_A Nucleobindin 1, calnuc; 98.6 1.2E-08 4.1E-13 81.4 2.3 60 180-239 22-99 (103)
494 2aao_A CDPK, calcium-dependent 98.6 5.9E-08 2E-12 83.5 6.6 97 58-206 64-161 (166)
495 1k8u_A S100A6, calcyclin, CACY 98.6 6.6E-09 2.3E-13 80.2 0.3 65 176-240 8-79 (90)
496 1w7j_B Myosin light chain 1; m 98.6 1.8E-08 6E-13 85.4 2.9 62 56-125 86-148 (151)
497 3p32_A Probable GTPase RV1496/ 98.6 2E-08 6.7E-13 98.5 2.7 61 334-410 172-232 (355)
498 2qac_A Myosin A tail domain in 98.5 1.2E-07 4.1E-12 79.8 7.1 61 56-125 83-144 (146)
499 1a4p_A S100A10; S100 family, E 98.5 2.5E-08 8.4E-13 78.6 2.2 65 176-241 7-78 (96)
500 3cs1_A Flagellar calcium-bindi 98.5 7.1E-08 2.4E-12 87.6 4.8 65 56-127 129-195 (219)
No 1
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=99.94 E-value=4e-27 Score=216.19 Aligned_cols=141 Identities=19% Similarity=0.284 Sum_probs=121.0
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
+.+||+|+|++|||||||++||+.+.|...+.||++.++..+.+..++....+.+|||+|+++|..+. ..+++.++++
T Consensus 12 k~~KivlvGd~~VGKTsLi~r~~~~~f~~~~~~Tig~d~~~k~~~~~~~~v~l~iwDtaGqe~~~~l~--~~~~~~a~~~ 89 (216)
T 4dkx_A 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGLERFRSLI--PSYIRDSAAA 89 (216)
T ss_dssp -CEEEEEECSTTSSHHHHHHHHHHSCCC----------CEEEEEECSSCEEEEEEECCSCTTTCGGGH--HHHHTTCSEE
T ss_pred CcEEEEEECcCCcCHHHHHHHHHhCCCCCCcCCccceEEEEEEEEecceEEEEEEEECCCchhhhhHH--HHHhccccEE
Confidence 45899999999999999999999999999999999999998999999888899999999999999998 7899999999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++|||+++++||+.+..|+..+..... +++|+||||||+|+.+. .++.++++++|+++|++||
T Consensus 90 ilv~di~~~~Sf~~i~~~~~~i~~~~~---~~~piilVgNK~Dl~~~r~V~~~e~~~~a~~~~~~~~ 153 (216)
T 4dkx_A 90 VVVYDITNVNSFQQTTKWIDDVRTERG---SDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFI 153 (216)
T ss_dssp EEEEETTCHHHHHTHHHHHHHHHHHHT---TSSEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred EEEeecchhHHHHHHHHHHHHHHHhcC---CCCeEEEEeeccchHhcCcccHHHHhhHHHHhCCeeE
Confidence 999999999999999999999887654 37999999999999876 4889999999999999986
No 2
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=99.89 E-value=6.7e-23 Score=179.20 Aligned_cols=141 Identities=18% Similarity=0.294 Sum_probs=120.0
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
..+||+|+|++|||||||++++.+..+...+.++.+.++....+.+++....+.+||++|++.+...+ ..+++.+|++
T Consensus 2 ~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~G~~~~~~~~--~~~~~~~d~~ 79 (170)
T 1g16_A 2 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTIT--TAYYRGAMGI 79 (170)
T ss_dssp CEEEEEEEESTTSSHHHHHHHHHHCCCCC-------CCEEEEEEESSSCEEEEEEECCTTGGGTSCCC--HHHHTTEEEE
T ss_pred CceEEEEECcCCCCHHHHHHHHHhCCCCCCCCCccceeEEEEEEEECCEEEEEEEEeCCCChhhhhhH--HHHhccCCEE
Confidence 45899999999999999999999999888788899988888889988777889999999999888776 6788999999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
++|||++++.++..+..|+..+...... ++|+++|+||+|+.++.+..+++.++++++++++|
T Consensus 80 i~v~d~~~~~s~~~~~~~~~~i~~~~~~---~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~ 142 (170)
T 1g16_A 80 ILVYDITDERTFTNIKQWFKTVNEHAND---EAQLLLVGNKSDMETRVVTADQGEALAKELGIPFI 142 (170)
T ss_dssp EEEEETTCHHHHHTHHHHHHHHHHHSCT---TCEEEEEEECTTCTTCCSCHHHHHHHHHHHTCCEE
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHhcCC---CCcEEEEEECccCCcCccCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999998876532 68999999999997667888999999999998875
No 3
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=99.89 E-value=5.2e-23 Score=186.43 Aligned_cols=146 Identities=14% Similarity=0.271 Sum_probs=118.4
Q ss_pred hhccCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccc
Q 014101 279 QQAERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLA 358 (430)
Q Consensus 279 ~~~~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~ 358 (430)
+......+||+|+|++|||||||+++|.++.+...+.+|++.++....+.+++....+.+||++|++.+..++ ..+++
T Consensus 23 ~~~~~~~~ki~vvG~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~ 100 (201)
T 2hup_A 23 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTIT--QSYYR 100 (201)
T ss_dssp ---CCEEEEEEEEECTTSSHHHHHHHHHHSCC----------CEEEEEEEETTEEEEEEEECCTTCGGGHHHH--HHHHT
T ss_pred ccccccceEEEEECcCCCCHHHHHHHHhhCCCCCCCCCCcceEEEEEEEEECCEEEEEEEEECCCcHhHHHHH--HHHHh
Confidence 3344667999999999999999999999999887777888888888888888666788999999999998887 78899
Q ss_pred cccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCC-ccc
Q 014101 359 ACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVM-VLY 429 (430)
Q Consensus 359 ~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~-~~f 429 (430)
.+|++|+|||++++.+|+.+..|+..+..... .++|++||+||+|+.+. .+..+++.++++.+++ ++|
T Consensus 101 ~~d~iilv~D~~~~~s~~~~~~~~~~i~~~~~---~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~~ 170 (201)
T 2hup_A 101 SANGAILAYDITKRSSFLSVPHWIEDVRKYAG---SNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAI 170 (201)
T ss_dssp TCSEEEEEEETTBHHHHHTHHHHHHHHHHHSC---TTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCSEEE
T ss_pred hCCEEEEEEECCCHHHHHHHHHHHHHHHHhcC---CCCCEEEEEECCccccccccCHHHHHHHHHHcCCCEEE
Confidence 99999999999999999999999999887653 27999999999999874 4778899999999998 665
No 4
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=99.89 E-value=4.5e-23 Score=183.15 Aligned_cols=142 Identities=13% Similarity=0.226 Sum_probs=100.5
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||+++|.++.+...+.|+++.++....+.+++....+.+||++|++.+..++ ..+++.+|+
T Consensus 6 ~~~~ki~v~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 83 (183)
T 2fu5_C 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTIT--TAYYRGAMG 83 (183)
T ss_dssp SEEEEEEEECCCCC----------------CHHHHHCEEEEEEEEEETTEEEEEEEEEC---------C--CTTTTTCSE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhCCCCCCCCCcccceeEEEEEEECCEEEEEEEEcCCCChhhhhhH--HHHHhcCCE
Confidence 457899999999999999999999998877777888888888888888667888999999999998887 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.+|+.+..|+..+..... .++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 84 ~i~v~d~~~~~s~~~~~~~~~~i~~~~~---~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 148 (183)
T 2fu5_C 84 IMLVYDITNEKSFDNIRNWIRNIEEHAS---ADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFM 148 (183)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHSC---TTCEEEEEEEC--CCSCCCSCHHHHHHHHHHHTCEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhcC---CCCCEEEEEECccCCccCcCCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999999887643 26899999999999875 4778999999999998876
No 5
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=99.89 E-value=1.1e-22 Score=186.37 Aligned_cols=142 Identities=13% Similarity=0.197 Sum_probs=121.8
Q ss_pred ccCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccc
Q 014101 281 AERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAAC 360 (430)
Q Consensus 281 ~~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~a 360 (430)
.....+||+|+|++|||||||+++|+++.+...+.+|++..+. ..+.+++....+.+||++|++.+..++ ..+++.+
T Consensus 23 ~~~~~~ki~vvG~~~vGKSsL~~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~ 99 (214)
T 3q3j_B 23 PVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYT-ACLETEEQRVELSLWDTSGSPYYDNVR--PLCYSDS 99 (214)
T ss_dssp ----CEEEEEECSTTSSHHHHHHHHHHSCCCSSCCCCSEEEEE-EEEEC--CEEEEEEEEECCSGGGTTTG--GGGCTTC
T ss_pred CccceEEEEEECcCCCCHHHHHHHHhcCCCCCCcCCeeeeeEE-EEEEECCEEEEEEEEECCCCHhHHHHH--HHHcCCC
Confidence 3355689999999999999999999999998888889887774 567777777889999999999999888 7899999
Q ss_pred cEEEEEEECCChhhHHH-HHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC-------------ccCcHHHHHHHHHHhCC
Q 014101 361 DIAVFVHDSSDESSWKR-ATELLVEVASYGEDTGFEVPCLIVAAKDDLDS-------------FAMAIQDSTRVFTFLVM 426 (430)
Q Consensus 361 d~vilv~D~t~~~S~~~-~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~-------------~~v~~~~~~~~~~~~g~ 426 (430)
|++|+|||+++++||.. +..|+..+.... +++|++|||||+|+.+ +.+..+++.++++.+++
T Consensus 100 d~~i~v~d~~~~~s~~~~~~~~~~~i~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 175 (214)
T 3q3j_B 100 DAVLLCFDISRPETVDSALKKWRTEILDYC----PSTRVLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGA 175 (214)
T ss_dssp SEEEEEEETTCTHHHHHHHTHHHHHHHHHC----TTSEEEEEEECGGGGGCHHHHHHHHHTTCCCCCHHHHHHHHHHHTC
T ss_pred eEEEEEEECcCHHHHHHHHHHHHHHHHHhC----CCCCEEEEEEChhhccchhhhhhhcccccCccCHHHHHHHHHHcCC
Confidence 99999999999999999 788999988764 3799999999999976 35789999999999998
Q ss_pred -ccc
Q 014101 427 -VLY 429 (430)
Q Consensus 427 -~~f 429 (430)
+||
T Consensus 176 ~~~~ 179 (214)
T 3q3j_B 176 EIYL 179 (214)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 775
No 6
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.9e-22 Score=178.25 Aligned_cols=142 Identities=19% Similarity=0.266 Sum_probs=124.7
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
..+.+||+|+|++|||||||++++++..+...+.++.+.++....+.+++....+.+||++|++.+..++ ..+++.+|
T Consensus 6 ~~~~~~i~v~G~~~~GKssl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 83 (181)
T 3tw8_B 6 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTIT--STYYRGTH 83 (181)
T ss_dssp CCEEEEEEEECCTTSCHHHHHHHHCSCC---CCTTTBSEEEEEEEEEETTEEEEEEEEEETTGGGCSSCC--GGGGTTCS
T ss_pred cCcceEEEEECCCCCCHHHHHHHHhcCCCCCccCCCceeEEEEEEEEECCEEEEEEEEcCCCchhhhhhH--HHHhccCC
Confidence 3567999999999999999999999999888888899988988888888767888999999999888877 78899999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc-CcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA-MAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~-v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.++..+..|+..+.... +++|+++|+||+|+.+.+ +..+++.+++..+++++|
T Consensus 84 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 148 (181)
T 3tw8_B 84 GVIVVYDVTSAESFVNVKRWLHEINQNC----DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLF 148 (181)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHHHHC----TTSEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCCEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhC----CCCCEEEEEECCCCchhcccCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999999988764 268999999999998764 668899999999998876
No 7
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=99.89 E-value=1.6e-22 Score=176.91 Aligned_cols=142 Identities=19% Similarity=0.227 Sum_probs=119.8
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||++++++..+...+.++.+.++....+.+++....+.+||++|++.+..+. ..+++.+|+
T Consensus 4 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d~ 81 (170)
T 1z08_A 4 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALG--PIYYRDSNG 81 (170)
T ss_dssp CEEEEEEEECCTTSCHHHHHHHHHHCCCCSSCCCCCSCEEEEEEEESSSCEEEEEEEECCCC---------CCSSTTCSE
T ss_pred CcceEEEEECcCCCCHHHHHHHHHcCCCCcCCCCccceEEEEEEEEECCEEEEEEEEECCCcHhhhhhH--HHHhccCCE
Confidence 456899999999999999999999998888778899988888888888777889999999999988887 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.++..+..|+..+...... ++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 82 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~~---~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 146 (170)
T 1z08_A 82 AILVYDITDEDSFQKVKNWVKELRKMLGN---EICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHY 146 (170)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHHGG---GSEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhcCC---CCeEEEEEECcccccccccCHHHHHHHHHHcCCeEE
Confidence 99999999999999999999888765422 6899999999999775 4778899999999998775
No 8
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=99.89 E-value=1.5e-22 Score=183.71 Aligned_cols=142 Identities=18% Similarity=0.241 Sum_probs=126.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||+++|+++.+...+.+|++.++....+.+++....+.+||++|++.+..+. ..+++.+|+
T Consensus 24 ~~~~ki~lvG~~~vGKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~l~Dt~G~~~~~~~~--~~~~~~~d~ 101 (201)
T 2ew1_A 24 DFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSIT--QSYYRSANA 101 (201)
T ss_dssp SEEEEEEEEESTTSSHHHHHHHHHHSSCCTTCCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGHHHH--GGGSTTCSE
T ss_pred ccceEEEEECcCCCCHHHHHHHHHhCCCCCCCCCccceeEEEEEEEECCEEEEEEEEECCCcHHHHHHH--HHHHhcCCE
Confidence 457899999999999999999999999888888899999988888888767788999999999998887 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.+|+.+..|+..+..... .++|+++|+||+|+.+. .+..+++.++++..+++||
T Consensus 102 ~i~v~D~~~~~s~~~~~~~~~~i~~~~~---~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 166 (201)
T 2ew1_A 102 LILTYDITCEESFRCLPEWLREIEQYAS---NKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYL 166 (201)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHSC---TTCEEEEEEECGGGGGGCSSCHHHHHHHHHHHTCCEE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHhcC---CCCCEEEEEECCCCccccccCHHHHHHHHHHcCCEEE
Confidence 9999999999999999999999887643 26899999999999764 4778899999999998875
No 9
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=99.89 E-value=4.8e-22 Score=179.74 Aligned_cols=142 Identities=13% Similarity=0.235 Sum_probs=126.5
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|.+|||||||+++|++..+...+.++.+.++....+...+....+.+||++|.+.+..++ ..+++.+|+
T Consensus 6 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 83 (203)
T 1zbd_A 6 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLERYRTIT--TAYYRGAMG 83 (203)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHHHTCCCCSCCCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGHHHH--HTTGGGCSE
T ss_pred ceeeEEEEECCCCCCHHHHHHHHhcCCCCCCcCCccceeEEEEEEEECCeEEEEEEEECCCchhhcchH--HHhhcCCCE
Confidence 456899999999999999999999999988888899988888888888777889999999999998887 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.+|..+..|+..+..... .++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 84 ii~v~d~~~~~s~~~~~~~~~~i~~~~~---~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 148 (203)
T 1zbd_A 84 FILMYDITNEESFNAVQDWSTQIKTYSW---DNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFF 148 (203)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHSC---SSCEEEEEEECTTCTTSCCSCHHHHHHHHHHHTCEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhcC---CCCCEEEEEECcccCcccccCHHHHHHHHHHCCCeEE
Confidence 9999999999999999999999887642 26899999999999875 4678899999999998875
No 10
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=99.89 E-value=2.9e-22 Score=179.20 Aligned_cols=143 Identities=20% Similarity=0.275 Sum_probs=125.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHH-hhhcccccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVA-KLLSNKDSLAACD 361 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~-~~~~~~~~~~~ad 361 (430)
...+||+|+|.+|||||||+++|+++.+...+.++++.++....+.+++....+.+||++|.+.+. .++ ..+++.+|
T Consensus 18 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~~--~~~~~~~d 95 (189)
T 1z06_A 18 SRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMV--QHYYRNVH 95 (189)
T ss_dssp -CEEEEEEECCTTSSHHHHHHHHHHSSCCSSCCCCCSCCEEEEEEEETTEEEEEEEEECCCSHHHHTTTH--HHHHTTCC
T ss_pred CceEEEEEECCCCCCHHHHHHHHHcCCCCCCCCCCcceEEEEEEEEECCEEEEEEEEECCCchhhhhhhh--HHHhcCCC
Confidence 456899999999999999999999999988888899988888888888667889999999999988 666 67889999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.||..+..|+..+...... .++|+++|+||+|+.+. ++..++++++++.+++++|
T Consensus 96 ~iilv~D~~~~~s~~~~~~~~~~i~~~~~~--~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 162 (189)
T 1z06_A 96 AVVFVYDMTNMASFHSLPAWIEECKQHLLA--NDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLF 162 (189)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHCCC--SCCCEEEEEECTTCGGGCCSCHHHHHHHHHHTTCCEE
T ss_pred EEEEEEECcCHHHHHHHHHHHHHHHHhcCC--CCCCEEEEEECccccccceeCHHHHHHHHHHcCCEEE
Confidence 999999999999999999999998876422 27999999999999775 4678899999999998875
No 11
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=99.89 E-value=3.9e-22 Score=176.49 Aligned_cols=142 Identities=18% Similarity=0.191 Sum_probs=126.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||++++++..+...+.++++.++....+.+++....+.+||++|++.+...+ ..+++.+|+
T Consensus 10 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 87 (181)
T 2efe_B 10 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLA--PMYYRGAAA 87 (181)
T ss_dssp CEEEEEEEECCTTSCHHHHHHHHHHCCCTTTSCCCSCCSEEEEEEEETTEEEEEEEEECCCSGGGGGGT--HHHHTTCSE
T ss_pred ccceEEEEECcCCCCHHHHHHHHHcCCCCCcCCCCceeEEEEEEEEECCEEEEEEEEeCCCChhhhhhh--HHHhccCCE
Confidence 456899999999999999999999999888887899988888888888777889999999999988877 678899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.+|+.+..|+..+..... +++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 88 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~---~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 152 (181)
T 2efe_B 88 AIIVFDVTNQASFERAKKWVQELQAQGN---PNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFM 152 (181)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHSC---TTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHhcC---CCCcEEEEEECCcccccccCCHHHHHHHHHHcCCEEE
Confidence 9999999999999999999999887653 27899999999999764 4678899999999998875
No 12
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=99.89 E-value=1.5e-22 Score=182.65 Aligned_cols=145 Identities=18% Similarity=0.241 Sum_probs=119.2
Q ss_pred ccCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHh-hhcccccccc
Q 014101 281 AERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAK-LLSNKDSLAA 359 (430)
Q Consensus 281 ~~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~-~~~~~~~~~~ 359 (430)
.....+||+|+|++|||||||+++|++......+.++++.+.....+.+++....+.+||++|++.+.. +. ..+++.
T Consensus 19 ~~~~~~ki~vvG~~~vGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~Dt~g~~~~~~~~~--~~~~~~ 96 (195)
T 3cbq_A 19 QKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIWEQGDAGGWLR--DHCLQT 96 (195)
T ss_dssp ---CEEEEEEECSTTSSHHHHHHHTCCEECCGGGTTTSCTTEEEEEEEETTEEEEEEEECCCCCSGGGHHHH--HHHHHH
T ss_pred CCCcEEEEEEECCCCCCHHHHHHHHHhccCCccCCCCcccceEEEEEEECCEEEEEEEEecCCCccchhhhH--HHhhcc
Confidence 345679999999999999999999987655544556777777777788887777888999999987664 44 567889
Q ss_pred ccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 360 CDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 360 ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+|++++|||++++.||..+..|+..+...... .++|+++||||+|+.+. .+..++++++++.++++||
T Consensus 97 ~d~~ilv~d~~~~~s~~~~~~~~~~i~~~~~~--~~~piilv~nK~Dl~~~~~v~~~~~~~~a~~~~~~~~ 165 (195)
T 3cbq_A 97 GDAFLIVFSVTDRRSFSKVPETLLRLRAGRPH--HDLPVILVGNKSDLARSREVSLEEGRHLAGTLSCKHI 165 (195)
T ss_dssp CSEEEEEEETTCHHHHHTHHHHHHHHHHHSTT--SCCCEEEEEECTTCTTTCCSCHHHHHHHHHHTTCEEE
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHHhcCC--CCCCEEEEeechhccccCCcCHHHHHHHHHHhCCEEE
Confidence 99999999999999999999999998875432 26899999999999864 4778899999999998775
No 13
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=99.89 E-value=2.2e-22 Score=175.79 Aligned_cols=142 Identities=19% Similarity=0.203 Sum_probs=125.3
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+++|++|||||||+++|+++.+...+.++.+.++....+.+++....+.+||++|++.+...+ ..+++.+|+
T Consensus 4 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~G~~~~~~~~--~~~~~~~d~ 81 (170)
T 1r2q_A 4 ICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLA--PMYYRGAQA 81 (170)
T ss_dssp EEEEEEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGH--HHHHTTCSE
T ss_pred CceEEEEEECCCCCCHHHHHHHHHcCCCCCCCCCccceEEEEEEEEECCEEEEEEEEeCCCcHHhhhhh--HHhccCCCE
Confidence 356899999999999999999999998888887899888888888888777888999999999988877 678899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.++..+..|+..+..... +++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 82 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~---~~~~iilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 146 (170)
T 1r2q_A 82 AIVVYDITNEESFARAKNWVKELQRQAS---PNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFM 146 (170)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHSC---TTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHhcC---CCCcEEEEEECccCccccccCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999999887643 27999999999999764 4678899999999998875
No 14
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=99.89 E-value=2.7e-22 Score=179.96 Aligned_cols=143 Identities=20% Similarity=0.314 Sum_probs=128.0
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
....+||+|+|++|||||||+++|++..+...+.++.+.++....+.+++....+.+||++|++.+..++ ..+++.+|
T Consensus 13 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 90 (196)
T 3tkl_A 13 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTIT--SSYYRGAH 90 (196)
T ss_dssp CSEEEEEEEECSTTSSHHHHHHHHHHSCCCSCCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGCTTH--HHHHTTCS
T ss_pred cccceEEEEECcCCCCHHHHHHHHHcCCCCCCCCCcccceEEEEEEEECCEEEEEEEEECCCcHhhhhhH--HHHHhhCC
Confidence 3567899999999999999999999999988888999999988889888767788999999999988877 78899999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc-CcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA-MAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~-v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.+|+.+..|+..+...... ++|+++|+||+|+.+.+ +..+++.++++.++++++
T Consensus 91 ~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~---~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 156 (196)
T 3tkl_A 91 GIIVVYDVTDQESFNNVKQWLQEIDRYASE---NVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFL 156 (196)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHSCT---TCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCCEE
T ss_pred EEEEEEECcCHHHHHHHHHHHHHHHHhcCC---CCCEEEEEECcccccccccCHHHHHHHHHHcCCcEE
Confidence 999999999999999999999998876543 78999999999998754 677899999999999876
No 15
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=99.89 E-value=2.9e-22 Score=174.94 Aligned_cols=140 Identities=18% Similarity=0.225 Sum_probs=124.2
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEE
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAV 364 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vi 364 (430)
.+||+++|++|||||||++++.++.+...+.++.+.++....+.+++....+.+||++|++.+...+ ..+++.+|+++
T Consensus 3 ~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~G~~~~~~~~--~~~~~~~d~~i 80 (170)
T 1ek0_A 3 SIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLA--PXYYRNAQAAL 80 (170)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGH--HHHHTTCSEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHhcCCCCCCCCCccceeEEEEEEEECCEEEEEEEEECCCChhhhhhh--hhhhccCcEEE
Confidence 5899999999999999999999999888788899988888888888777788999999999988877 78889999999
Q ss_pred EEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc----cCcHHHHHHHHHHhCCccc
Q 014101 365 FVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF----AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 365 lv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~----~v~~~~~~~~~~~~g~~~f 429 (430)
+|||++++.++..+..|+..+..... .++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 81 ~v~d~~~~~s~~~~~~~~~~~~~~~~---~~~piilv~nK~Dl~~~~~~~~v~~~~~~~~~~~~~~~~~ 146 (170)
T 1ek0_A 81 VVYDVTKPQSFIKARHWVKELHEQAS---KDIIIALVGNKIDXLQEGGERKVAREEGEKLAEEKGLLFF 146 (170)
T ss_dssp EEEETTCHHHHHHHHHHHHHHHHHSC---TTCEEEEEEECGGGGGSSCCCCSCHHHHHHHHHHHTCEEE
T ss_pred EEEecCChHHHHHHHHHHHHHHHhcC---CCCcEEEEEECCCccccccccCCCHHHHHHHHHHcCCEEE
Confidence 99999999999999999999887653 27899999999999763 4678899999999998875
No 16
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=99.89 E-value=2.7e-22 Score=179.45 Aligned_cols=143 Identities=15% Similarity=0.241 Sum_probs=126.1
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
....+||+|+|++|||||||+++|++..+...+.++.+.++....+...+....+.+||++|++.+..++ ..+++.+|
T Consensus 19 ~~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d 96 (189)
T 2gf9_A 19 SDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTIT--TAYYRGAM 96 (189)
T ss_dssp CSEEEEEEEECSTTSSHHHHHHHHHHSCCCCSCCCCCCCEEEEEEEEETTEEEEEEEEECCSCCSSCCSG--GGGGTTCS
T ss_pred cCceeEEEEECCCCCCHHHHHHHHHcCCCCCCcCCceeEEEEEEEEEECCeEEEEEEEeCCCcHHHhhhH--HHhccCCC
Confidence 4567999999999999999999999999888877898888888888888677888999999998888877 78899999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.+++.+..|+..+..... .++|+++|+||+|+.+. .+..++++++++.+++++|
T Consensus 97 ~ii~v~d~~~~~s~~~~~~~~~~i~~~~~---~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 162 (189)
T 2gf9_A 97 GFLLMYDIANQESFAAVQDWATQIKTYSW---DNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFF 162 (189)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHSC---TTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhcC---CCCCEEEEEECcccccccCCCHHHHHHHHHHcCCeEE
Confidence 99999999999999999999999887642 27899999999999775 4668899999999998775
No 17
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=99.89 E-value=1.9e-22 Score=180.80 Aligned_cols=143 Identities=16% Similarity=0.239 Sum_probs=122.4
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
..+.+||+|+|++|||||||+++|+++.+...+.++.+.++....+.+++....+.+||++|++.+..++ ..+++.+|
T Consensus 18 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 95 (191)
T 2a5j_A 18 GSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSIT--RSYYRGAA 95 (191)
T ss_dssp TCEEEEEEEESSTTSSHHHHHHHHHHSCCCC-----CCSSEEEEEEEETTEEEEEEEECCTTGGGTSCCC--HHHHTTCS
T ss_pred cCcceEEEEECcCCCCHHHHHHHHhcCCCCCCCCCcccceeEEEEEEECCEEEEEEEEECCCchhhhhhH--HHHhccCC
Confidence 3567899999999999999999999999888887888988888888888767888999999999988776 68889999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.+++.+..|+..+..... .++|+++|+||+|+.+. .+..+++.++++.++++++
T Consensus 96 ~ii~v~d~~~~~s~~~~~~~l~~i~~~~~---~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 161 (191)
T 2a5j_A 96 GALLVYDITRRETFNHLTSWLEDARQHSS---SNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFM 161 (191)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHSC---TTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhcC---CCCCEEEEEECcccCCccccCHHHHHHHHHHcCCEEE
Confidence 99999999999999999999999887643 27899999999999764 4778899999999998875
No 18
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=99.89 E-value=2.8e-22 Score=178.32 Aligned_cols=142 Identities=18% Similarity=0.299 Sum_probs=125.9
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||+++|++..+...+.++.+.++....+.+++....+.+||++|++.+...+ ..+++.+|+
T Consensus 8 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 85 (186)
T 2bme_A 8 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVT--RSYYRGAAG 85 (186)
T ss_dssp SEEEEEEEEESTTSSHHHHHHHHHHSSCCTTCCCCSEEEEEEEEEEETTEEEEEEEEEECCSGGGHHHH--HTTSTTCSE
T ss_pred ccceEEEEECCCCCCHHHHHHHHHcCCCCCCCCCccceEEEEEEEEECCEEEEEEEEeCCCcHHHHHHH--HHHHhcCCE
Confidence 457899999999999999999999999988888898888888888888666788999999999998887 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.++..+..|+..+..... .++|+++|+||+|+... .+...++.++++.++++++
T Consensus 86 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~---~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (186)
T 2bme_A 86 ALLVYDITSRETYNALTNWLTDARMLAS---QNIVIILCGNKKDLDADREVTFLEASRFAQENELMFL 150 (186)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHSC---TTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhcC---CCCcEEEEEECcccccccccCHHHHHHHHHHcCCEEE
Confidence 9999999999999999999988877543 27899999999999764 4778899999999998875
No 19
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=99.88 E-value=3.4e-22 Score=177.14 Aligned_cols=141 Identities=13% Similarity=0.224 Sum_probs=121.4
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
..+||+++|++|||||||+++|+++.+...+.+|.+..+ ...+.+++....+.+||++|++.+..+. ..+++.+|++
T Consensus 5 ~~~ki~~~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~~~~ 81 (181)
T 3t5g_A 5 KSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKLITVNGQEYHLQLVDTAGQDEYSIFP--QTYSIDINGY 81 (181)
T ss_dssp EEEEEEEEESTTSSHHHHHHHHHHSSCCSCCCTTCCEEE-EEEEEETTEEEEEEEEECCCCCTTCCCC--GGGTTTCSEE
T ss_pred ceEEEEEECcCCCCHHHHHHHHHcCCCCCCCCCCccccE-EEEEEECCEEEEEEEEeCCCchhhhHHH--HHHHhcCCEE
Confidence 468999999999999999999998888888878888777 5677777667788899999999888776 7888999999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++|||++++++|+.+..|+..+...... .++|+++|+||+|+.+. .+..+++.++++.++++||
T Consensus 82 i~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 146 (181)
T 3t5g_A 82 ILVYSVTSIKSFEVIKVIHGKLLDMVGK--VQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFL 146 (181)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHHC------CCEEEEEECTTCTTTCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHhcCC--CCCCEEEEEECccchhcceecHHHHHHHHHHhCCcEE
Confidence 9999999999999999999998766432 36899999999999764 4778999999999999876
No 20
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=99.88 E-value=5e-22 Score=173.62 Aligned_cols=141 Identities=17% Similarity=0.232 Sum_probs=125.1
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
+.+||+++|++|||||||++++.+..+...+.++.+.++....+.+.+....+.+||++|.+.+..+. ..+++.+|++
T Consensus 5 ~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~~~~ 82 (170)
T 1z0j_A 5 RELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERFRALA--PMYYRGSAAA 82 (170)
T ss_dssp EEEEEEEECCTTSSHHHHHHHHHHSCCCTTCCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGT--HHHHTTCSEE
T ss_pred cceEEEEECcCCCCHHHHHHHHHcCCCCCCCCCceeEEEEEEEEEECCeEEEEEEEcCCCchhhhccc--HhhCcCCCEE
Confidence 45899999999999999999999999888888899988888888888777888999999999888877 6788999999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++|||++++.++..+..|+..+..... +.+|+++|+||+|+.+. ++..+++..+++.+++++|
T Consensus 83 i~v~d~~~~~s~~~~~~~~~~l~~~~~---~~~~iilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 146 (170)
T 1z0j_A 83 IIVYDITKEETFSTLKNWVRELRQHGP---PSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAIFV 146 (170)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHHSC---TTSEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHhCC---CCCcEEEEEECCccccccccCHHHHHHHHHHcCCEEE
Confidence 999999999999999999999887643 37899999999999874 4678899999999998875
No 21
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=99.88 E-value=3e-22 Score=177.80 Aligned_cols=143 Identities=19% Similarity=0.263 Sum_probs=124.1
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
..+.+||+|+|++|||||||+++|+++.+...+.++.+..+ ...+.+++....+.+||++|++.+..+. ..+++.+|
T Consensus 15 ~~~~~ki~v~G~~~~GKSsl~~~l~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d 91 (183)
T 3kkq_A 15 NLPTYKLVVVGDGGVGKSALTIQFFQKIFVDDYDPTIEDSY-LKHTEIDNQWAILDVLDTAGQEEFSAMR--EQYMRTGD 91 (183)
T ss_dssp CCCEEEEEEECSTTSSHHHHHHHHHHSCCCSCCCTTCCEEE-EEEEEETTEEEEEEEEECCSCGGGCSSH--HHHHHHCS
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHhCCCCCCCCCCcccee-EEEEEeCCcEEEEEEEECCCchhhHHHH--HHHHhcCC
Confidence 35679999999999999999999999988888878888777 5677777666778899999999988887 78889999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||+++++||+.+..|+..+...... .++|+++|+||+|+.+. .+..+++.++++.++++||
T Consensus 92 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~p~ilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 158 (183)
T 3kkq_A 92 GFLIVYSVTDKASFEHVDRFHQLILRVKDR--ESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYI 158 (183)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHHTS--SCCCEEEEEECTTCSTTCCSCHHHHHHHHHHHTCCEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhcCC--CCCcEEEEEECCCchhccCcCHHHHHHHHHHhCCeEE
Confidence 999999999999999999999988764322 27899999999999774 5778999999999999876
No 22
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=99.88 E-value=3.9e-22 Score=175.87 Aligned_cols=142 Identities=15% Similarity=0.284 Sum_probs=125.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|.+|||||||++++.+..+...+.++.+.++....+.+++....+.+||++|++.+...+ ..+++.+|+
T Consensus 13 ~~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 90 (179)
T 1z0f_A 13 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVT--RSYYRGAAG 90 (179)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHHHHSCCCSSCTTSCCCCEEEEEEEETTEEEEEEEEECTTGGGTCHHH--HHHHHTCSE
T ss_pred ccceEEEEECCCCCCHHHHHHHHHcCCCCCCCCCccceEEEEEEEEECCeEEEEEEEECCCChHhhhhH--HHHhccCCE
Confidence 457899999999999999999999999888777888888888888888667788999999999888877 688899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.++..+..|+..+...... ++|+++|+||+|+.+. .+..++++++++.+++++|
T Consensus 91 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~~---~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 155 (179)
T 1z0f_A 91 ALMVYDITRRSTYNHLSSWLTDARNLTNP---NTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFL 155 (179)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHSCT---TCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEeCcCHHHHHHHHHHHHHHHHhcCC---CCcEEEEEECcccccccccCHHHHHHHHHHcCCEEE
Confidence 99999999999999999999988876532 7899999999999764 4678899999999998875
No 23
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=99.88 E-value=4.9e-22 Score=180.21 Aligned_cols=142 Identities=20% Similarity=0.291 Sum_probs=126.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||+++|.+..+...+.++.+.++....+.+++....+.+||++|++.+..++ ..+++.+|+
T Consensus 6 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 83 (206)
T 2bcg_Y 6 DYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTIT--SSYYRGSHG 83 (206)
T ss_dssp SEEEEEEEEESTTSSHHHHHHHHHHCCCCTTCCCSSCCCEEEEEEEETTEEEEEEEECCTTTTTTTCCC--GGGGTTCSE
T ss_pred CcceEEEEECCCCCCHHHHHHHHhcCCCCCCCCCcccceeEEEEEEECCEEEEEEEEeCCChHHHHHHH--HHhccCCCE
Confidence 456899999999999999999999999988888999999988888888767789999999999988877 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.++..+..|+..+...... ++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 84 vilv~d~~~~~s~~~~~~~~~~i~~~~~~---~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 148 (206)
T 2bcg_Y 84 IIIVYDVTDQESFNGVKMWLQEIDRYATS---TVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFL 148 (206)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHSCT---TCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCCEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhcCC---CCCEEEEEECCCCccccccCHHHHHHHHHHcCCeEE
Confidence 99999999999999999999998876532 6899999999999875 4778899999999998875
No 24
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=99.88 E-value=4e-22 Score=181.41 Aligned_cols=143 Identities=18% Similarity=0.282 Sum_probs=125.2
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
....+||+|+|++|||||||+++|++..+...+.++++.++....+.+++....+.+||++|++.+..++ ..+++.+|
T Consensus 17 ~~~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d 94 (213)
T 3cph_A 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTIT--TAYYRGAM 94 (213)
T ss_dssp ---CEEEEEECSTTSSHHHHHHHHHHCCCCCSSSCCCSCCEEEEEEEETTEEEEEEEECCTTGGGGTCCC--HHHHTTCS
T ss_pred CCcceEEEEECCCCCCHHHHHHHHHhCCCCcccCCcccceEEEEEEEECCEEEEEEEEeCCCcHHHHHHH--HHHhccCC
Confidence 4567899999999999999999999999888888899988888888888666788999999999888776 67889999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.++..+..|+..+...... ++|+++|+||+|+..+.+..+++.++++.+++++|
T Consensus 95 ~ii~v~d~~~~~s~~~~~~~~~~i~~~~~~---~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~ 159 (213)
T 3cph_A 95 GIILVYDVTDERTFTNIKQWFKTVNEHAND---EAQLLLVGNKSDMETRVVTADQGEALAKELGIPFI 159 (213)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHTTT---CSEEEEEEECTTCSSCCSCHHHHHHHHHHHTCCEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhcCC---CCCEEEEEECCCCcccccCHHHHHHHHHHcCCEEE
Confidence 999999999999999999999998876532 68999999999997666788899999999998875
No 25
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=99.88 E-value=3.9e-22 Score=179.07 Aligned_cols=142 Identities=18% Similarity=0.241 Sum_probs=126.6
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||+++|++..+...+.++.+.++....+.+++....+.+||++|.+.+..++ ..+++.+|+
T Consensus 21 ~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 98 (192)
T 2fg5_A 21 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLA--PMYYRGSAA 98 (192)
T ss_dssp CEEEEEEEEECTTSSHHHHHHHHHHCCCCTTCCCCSSEEEEEEEEECSSSEEEEEEEEECCSGGGGGGT--HHHHTTCSE
T ss_pred CCceEEEEECcCCCCHHHHHHHHhcCCCCCCcCCCcceeEEEEEEEeCCEEEEEEEEcCCCchhhHhhh--HHhhccCCE
Confidence 456899999999999999999999999887777899998888888888778889999999999988887 688899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.++..+..|+..+..... .++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 99 iilV~d~~~~~s~~~~~~~~~~i~~~~~---~~~piiiv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 163 (192)
T 2fg5_A 99 AVIVYDITKQDSFYTLKKWVKELKEHGP---ENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVV 163 (192)
T ss_dssp EEEEEETTCTHHHHHHHHHHHHHHHHSC---TTCEEEEEEECGGGGGGCCSCHHHHHHHHHTTTCEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhCC---CCCcEEEEEECcccccccccCHHHHHHHHHHcCCEEE
Confidence 9999999999999999999999887653 26899999999999764 4678899999999998875
No 26
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=99.88 E-value=8.4e-22 Score=173.19 Aligned_cols=141 Identities=18% Similarity=0.248 Sum_probs=110.1
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhH--HHhhhcccccccccc
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEA--VAKLLSNKDSLAACD 361 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~--~~~~~~~~~~~~~ad 361 (430)
+.+||+++|++|||||||+++|.+..+...+ ++.+.++....+.+++....+.+||++|.+. +..+. ..+++.+|
T Consensus 3 ~~~ki~i~G~~~vGKSsl~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~g~~~~~~~~~~--~~~~~~~~ 79 (175)
T 2nzj_A 3 ALYRVVLLGDPGVGKTSLASLFAGKQERDLH-EQLGEDVYERTLTVDGEDTTLVVVDTWEAEKLDKSWSQ--ESCLQGGS 79 (175)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHCC-----C-CCSSSSEEEEEEEETTEEEEEEEECCC-------CHHH--HHTTTSCS
T ss_pred eEEEEEEECCCCccHHHHHHHHhcCCCcccc-CccccceeEEEEEECCEEEEEEEEecCCCCccchhhhH--HhhcccCC
Confidence 4689999999999999999999999887665 5677777777888887677889999999887 44444 57789999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.+|+.+..|+..+...... .++|+++|+||+|+.+. .+..++++.+++.+++++|
T Consensus 80 ~~i~v~d~~~~~s~~~~~~~~~~l~~~~~~--~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 146 (175)
T 2nzj_A 80 AYVIVYSIADRGSFESASELRIQLRRTHQA--DHVPIILVGNKADLARCREVSVEEGRACAVVFDCKFI 146 (175)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHHHCC------CCEEEEEECTTCTTTCCSCHHHHHHHHHHHTSEEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhhcc--CCCCEEEEEEChhhccccccCHHHHHHHHHHcCCeEE
Confidence 999999999999999999999988875322 26899999999999874 4778889999999998775
No 27
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=99.88 E-value=7.8e-23 Score=183.37 Aligned_cols=143 Identities=14% Similarity=0.239 Sum_probs=128.0
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
....+||+|+|.+|||||||+++|+++.+...+.++.+.++....+...+....+.+||++|++.+..++ ..+++.+|
T Consensus 20 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 97 (191)
T 3dz8_A 20 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTIT--TAYYRGAM 97 (191)
T ss_dssp EEECEEEEEEESTTSSHHHHHHHHHHHTTCCCEEEEETTTEEEEEEEETTTTEEEEEECHHHHHHCHHHH--HHHHTTCC
T ss_pred cCeeeEEEEECCCCcCHHHHHHHHhcCCCCcccCCCeeeEEEEEEEEECCEEEEEEEEeCCChHHHHHHH--HHHHccCC
Confidence 3567999999999999999999999999888887888888888888888778889999999999998887 78899999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.+|+.+..|+..+...... ++|+++|+||+|+.+. .+..++++.+++.+++++|
T Consensus 98 ~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~---~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 163 (191)
T 3dz8_A 98 GFILMYDITNEESFNAVQDWATQIKTYSWD---NAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFF 163 (191)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHSCT---TCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred EEEEEEECcCHHHHHHHHHHHHHHHHhcCC---CCCEEEEEECCCCccccccCHHHHHHHHHHcCCeEE
Confidence 999999999999999999999999876532 7999999999999765 4778899999999999876
No 28
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=99.88 E-value=4.1e-22 Score=174.34 Aligned_cols=141 Identities=18% Similarity=0.225 Sum_probs=108.4
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHh-hhccccccccccEE
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAK-LLSNKDSLAACDIA 363 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~-~~~~~~~~~~ad~v 363 (430)
.+||+++|++|||||||+++|.+..+...+.++.+.+.....+.+++....+.+||++|++.+.. +. ..+++.+|++
T Consensus 2 ~~ki~ivG~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~~~~~--~~~~~~~d~~ 79 (169)
T 3q85_A 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQGDAGGWLQ--DHCLQTGDAF 79 (169)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHCC------------CEEEEEEEETTEEEEEEEECCCCC----------CHHHHHCSEE
T ss_pred cEEEEEECCCCCCHHHHHHHHHhccCcccccCCCcCCeeeEEEEECCeEEEEEEEECCCccccchhhh--hhhhccCCEE
Confidence 58999999999999999999998887776666777777778888887778888999999988876 44 5678889999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++|||++++++|..+..|+..+...... .++|+++|+||+|+.+. .+..+++.++++.++++|+
T Consensus 80 i~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 144 (169)
T 3q85_A 80 LIVFSVTDRRSFSKVPETLLRLRAGRPH--HDLPVILVGNKSDLARSREVSLEEGRHLAGTLSCKHI 144 (169)
T ss_dssp EEEEETTCHHHHHTHHHHHHHHHHHSTT--SCCCEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEECCChHHHHHHHHHHHHHHhcccC--CCCCEEEEeeCcchhhcccCCHHHHHHHHHHcCCcEE
Confidence 9999999999999999999998876542 26999999999999864 5788999999999999876
No 29
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=99.88 E-value=4.4e-22 Score=178.29 Aligned_cols=143 Identities=16% Similarity=0.252 Sum_probs=126.9
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
.+.+||+|+|++|||||||+++|++..+...+.++.+.++....+.+++....+.+||++|++.+..++ ..+++.+|+
T Consensus 13 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 90 (195)
T 1x3s_A 13 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLT--PSYYRGAQG 90 (195)
T ss_dssp EEEEEEEEECSTTSSHHHHHHHHHHSCCCTTCCCCCSEEEEEEEEEETTEEEEEEEEEECSSGGGCCSH--HHHHTTCCE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHcCCCCccCCCccceEEEEEEEEECCeEEEEEEEeCCCchhhhhhh--HHHhccCCE
Confidence 346899999999999999999999999888888899988888888888777889999999999888877 688899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.++..+..|+..+...... .++|+++|+||+|+.+..+..+++.++++.+++++|
T Consensus 91 ii~v~d~~~~~s~~~~~~~~~~i~~~~~~--~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~ 155 (195)
T 1x3s_A 91 VILVYDVTRRDTFVKLDNWLNELETYCTR--NDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFI 155 (195)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHTTCCSC--SCCEEEEEEECTTSSSCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhcCc--CCCcEEEEEECCcCcccccCHHHHHHHHHHcCCEEE
Confidence 99999999999999999999998775432 268999999999997767888999999999998775
No 30
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=99.88 E-value=9.9e-22 Score=173.69 Aligned_cols=142 Identities=16% Similarity=0.261 Sum_probs=117.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCC-CcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSD-NYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~-~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
...+||+++|.+|||||||+++|++..+.. .+.++++.++....+.+++....+.+||++|++.+..++ ..+++.+|
T Consensus 8 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~d 85 (180)
T 2g6b_A 8 DVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVT--HAYYRDAH 85 (180)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHHHHSCCCCCCCCCCCSCEEEEEEEEETTEEEEEEEEECCCC----------CCGGGCS
T ss_pred CcceEEEEECcCCCCHHHHHHHHHhCCCCCCCcCCceeeEEEEEEEEECCEEEEEEEEeCCCcHHHHHHH--HHHccCCC
Confidence 567899999999999999999999988853 556888888887777888667788999999999998877 78899999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.+++.+..|+..+..... .++|+++|+||+|+.+. .+..+++.++++.++++++
T Consensus 86 ~ii~v~d~~~~~s~~~~~~~~~~i~~~~~---~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 151 (180)
T 2g6b_A 86 ALLLLYDVTNKASFDNIQAWLTEIHEYAQ---HDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFM 151 (180)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHSC---TTCEEEEEEECCSTTSCCCSCHHHHHHHHHHHTCCEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhCC---CCCcEEEEEECcccCcccccCHHHHHHHHHHcCCeEE
Confidence 99999999999999999999999887653 27899999999999875 4678899999999998775
No 31
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=99.88 E-value=2.3e-22 Score=179.98 Aligned_cols=143 Identities=16% Similarity=0.243 Sum_probs=117.4
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||+++|+++.+...+.+|++..+. ..+.+++....+.+||++|++.+..+ ..+++.+|+
T Consensus 19 ~~~~ki~vvG~~~vGKTsLi~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~l~i~Dt~G~~~~~~~---~~~~~~~~~ 94 (187)
T 3c5c_A 19 PLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYS-SEETVDHQPVHLRVMDTADLDTPRNC---ERYLNWAHA 94 (187)
T ss_dssp -CEEEEEEECCTTSSHHHHHHHHHHSSCCSCCCTTCCEEEE-EEEEETTEEEEEEEEECCC---CCCT---HHHHTTCSE
T ss_pred CceEEEEEECCCCCcHHHHHHHHHhCCCCcccCCCccceee-EEEEECCEEEEEEEEECCCCCcchhH---HHHHhhCCE
Confidence 45689999999999999999999999988888788887764 45666766778889999999887764 368899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||+++++||+.+..|+..+.........++|+++|+||+|+.+. .+..+++.+++++++++||
T Consensus 95 ~ilv~d~~~~~s~~~~~~~~~~i~~~~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 162 (187)
T 3c5c_A 95 FLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDMAQYRQVTKAEGVALAGRFGCLFF 162 (187)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECGGGGGGCSSCHHHHHHHHHHHTCEEE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHhhccCCCCCEEEEEECcchhhcCccCHHHHHHHHHHcCCcEE
Confidence 999999999999999999999887753110126899999999999764 4778999999999999876
No 32
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.88 E-value=4e-23 Score=183.49 Aligned_cols=142 Identities=18% Similarity=0.284 Sum_probs=117.1
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...||++++++|+++|..||+|+||.|+.+||..+++. +|..+++.++..++..+ |.+++| |+|+||+.++.
T Consensus 2 a~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~-lg~~~~~~~~~~~~~~~------d~d~~~~i~~~ef~~~~~ 74 (176)
T 2lhi_A 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRS-LGLSPSEAEVNDLMNEI------DVDGNHQIEFSEFLALMS 74 (176)
T ss_dssp CCCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHH-HTCCCCHHHHHHHHTTT------CSSCSSSBCTTHHHHHHT
T ss_pred CCcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-cCCChhHHHHHHHHHHh------CcCCCccchHHHHHHHHH
Confidence 35799999999999999999999999999999999775 58899999999999888 677888 99999998753
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
.. .......+.|+++|+.||+||+|+|+.+||+.++..
T Consensus 75 ~~------------------------------------------~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~ 112 (176)
T 2lhi_A 75 RQ------------------------------------------LKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTS 112 (176)
T ss_dssp SS------------------------------------------CCSSHHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHT
T ss_pred Hh------------------------------------------cccCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 10 001223456999999999999999999999999987
Q ss_pred CCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 207 APECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 207 ~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+... .....+++.+| |+||.|+|+||+....
T Consensus 113 ~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~ 146 (176)
T 2lhi_A 113 IGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLS 146 (176)
T ss_dssp TTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHT
T ss_pred cCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHH
Confidence 54322 22346778889 9999999999998743
No 33
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=99.88 E-value=8.5e-22 Score=173.65 Aligned_cols=145 Identities=14% Similarity=0.212 Sum_probs=121.4
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+++|++|||||||+++++++.+...+.++.+.++....+.+++....+.+||++|++.+..++ ..+++.+|+
T Consensus 5 ~~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~~~ 82 (177)
T 1wms_A 5 SSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLR--TPFYRGSDC 82 (177)
T ss_dssp EEEEEEEEECCTTSSHHHHHHHHHHSCCCC----CCSEEEEEEEEEETTEEEEEEEEECCCCGGGHHHH--GGGGTTCSE
T ss_pred cceeEEEEECCCCCCHHHHHHHHHcCCCCCCCCCceeeeEEEEEEEECCEEEEEEEEeCCCchhhhhhH--HHHHhcCCE
Confidence 456899999999999999999999999888888899988888888888767789999999999998887 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCC-CCCCCcEEEEEeCCCCCCccCcHHHHHHHHH-HhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGED-TGFEVPCLIVAAKDDLDSFAMAIQDSTRVFT-FLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~-~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~-~~g~~~f 429 (430)
+++|||++++.++..+..|+..+...... ...++|+++|+||+|+.+..+..+++.++++ ..++++|
T Consensus 83 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 151 (177)
T 1wms_A 83 CLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYF 151 (177)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHHTCSCTTTSCEEEEEECTTCSSCSSCHHHHHHHHHHTTCCCEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHHccccccCCCcEEEEEECCcccccccCHHHHHHHHHhcCCceEE
Confidence 99999999999999999999888765321 1136899999999999876788899999998 4556664
No 34
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=99.88 E-value=3.8e-22 Score=174.08 Aligned_cols=141 Identities=16% Similarity=0.232 Sum_probs=124.4
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
+..+||+++|++|||||||++++.++.+...+.+|.+.++....+.+++....+.+||++|++.+..+. ..+++.+|+
T Consensus 3 ~~~~~i~v~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 80 (168)
T 1z2a_A 3 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAIT--KAYYRGAQA 80 (168)
T ss_dssp -CEEEEEEECSTTSSHHHHHHHHHHCCCCCCSSCCCSSSEEEEEEEETTEEEEEEEECCTTGGGTTCCC--HHHHTTCCE
T ss_pred ceeEEEEEECcCCCCHHHHHHHHHcCCCCCCCCCceEEEEEEEEEEECCEEEEEEEEcCCCcHhHHHHH--HHHhcCCCE
Confidence 356899999999999999999999999888888899988888888888667788999999999888776 678899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.+++.+..|+..+.... .+.|+++|+||+|+.+. .+..++++++++.+++++|
T Consensus 81 ~i~v~d~~~~~s~~~~~~~~~~i~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 144 (168)
T 1z2a_A 81 CVLVFSTTDRESFEAISSWREKVVAEV----GDIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFY 144 (168)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHH----CSCCEEEEEECGGGGGGCSSCHHHHHHHHHHHTCEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhC----CCCCEEEEEECcccCcccccCHHHHHHHHHHcCCeEE
Confidence 999999999999999999999887764 26899999999999874 4678899999999998875
No 35
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=99.88 E-value=6.5e-22 Score=176.25 Aligned_cols=140 Identities=17% Similarity=0.213 Sum_probs=120.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+++|++|||||||+++|.++.+...+.||.+..+. ..+.+++....+.+||++|++.+..+. ..+++.+|+
T Consensus 5 ~~~~ki~v~G~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~~~ 81 (184)
T 1m7b_A 5 NVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYT-ASFEIDTQRIELSLWDTSGSPYYDNVR--PLSYPDSDA 81 (184)
T ss_dssp -CEEEEEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEE-EEEECSSCEEEEEEEEECCSGGGTTTG--GGGCTTCSE
T ss_pred ceEEEEEEECCCCCCHHHHHHHHhcCCCCCCCCCccceeEE-EEEEECCEEEEEEEEECCCChhhhhhH--HhhcCCCcE
Confidence 45689999999999999999999999988877788877664 466777777889999999999988877 678999999
Q ss_pred EEEEEECCChhhHHHH-HHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC-------------ccCcHHHHHHHHHHhC-Cc
Q 014101 363 AVFVHDSSDESSWKRA-TELLVEVASYGEDTGFEVPCLIVAAKDDLDS-------------FAMAIQDSTRVFTFLV-MV 427 (430)
Q Consensus 363 vilv~D~t~~~S~~~~-~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~-------------~~v~~~~~~~~~~~~g-~~ 427 (430)
+++|||++++.||..+ ..|+..+.... +++|+++|+||+|+.+ +.+..+++.+++++++ ++
T Consensus 82 ~i~v~d~~~~~s~~~~~~~~~~~i~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (184)
T 1m7b_A 82 VLICFDISRPETLDSVLKKWKGEIQEFC----PNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAAT 157 (184)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHHC----TTCEEEEEEECGGGGGCHHHHHHHHTTTCCCCCHHHHHHHHHHHTCSE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHHC----CCCCEEEEEEcchhhcchhhHhhhhhcccCCCCHHHHHHHHHHcCCcE
Confidence 9999999999999998 68988887654 2689999999999974 3477889999999988 56
Q ss_pred cc
Q 014101 428 LY 429 (430)
Q Consensus 428 ~f 429 (430)
||
T Consensus 158 ~~ 159 (184)
T 1m7b_A 158 YI 159 (184)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 36
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=99.88 E-value=1e-21 Score=176.72 Aligned_cols=140 Identities=17% Similarity=0.226 Sum_probs=122.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCe-----------------------------
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGT----------------------------- 333 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~----------------------------- 333 (430)
+..+||+|+|++|||||||+++|++..+...+.+|.+.++....+.+++..
T Consensus 5 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (208)
T 3clv_A 5 KSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNNINSINDDNNVIITNQHN 84 (208)
T ss_dssp CSSEEEEEECCTTSSHHHHHHHHHHSCCCSSCCCCCSCEEEEEEEETTC-------------------------------
T ss_pred CcceEEEEECCCCCCHHHHHHHHHhCcCCCCcCccccceeEEEEEEecCccccccccccccccccccccccccccccccc
Confidence 456899999999999999999999999988888899988888888887544
Q ss_pred --------EEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCC
Q 014101 334 --------KKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKD 405 (430)
Q Consensus 334 --------~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~ 405 (430)
..+.+||++|++.+..+. ..+++.+|++++|||++++.++..+..|+..+.... +.|+++|+||+
T Consensus 85 ~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~~i~v~D~~~~~s~~~~~~~~~~i~~~~-----~~piilv~NK~ 157 (208)
T 3clv_A 85 NYNENLCNIKFDIWDTAGQERYASIV--PLYYRGATCAIVVFDISNSNTLDRAKTWVNQLKISS-----NYIIILVANKI 157 (208)
T ss_dssp CCCTTTCEEEEEEEECTTGGGCTTTH--HHHHTTCSEEEEEEETTCHHHHHHHHHHHHHHHHHS-----CCEEEEEEECT
T ss_pred cccCccceeEEEEEECCCcHHHHHHH--HHHhcCCCEEEEEEECCCHHHHHHHHHHHHHHHhhC-----CCcEEEEEECC
Confidence 778899999999888877 678899999999999999999999999999998764 48999999999
Q ss_pred CCCCccCcHHHHHHHHHHhCCccc
Q 014101 406 DLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 406 Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
|+....+..+++.++++++++++|
T Consensus 158 D~~~~~~~~~~~~~~~~~~~~~~~ 181 (208)
T 3clv_A 158 DKNKFQVDILEVQKYAQDNNLLFI 181 (208)
T ss_dssp TCC-CCSCHHHHHHHHHHTTCEEE
T ss_pred CcccccCCHHHHHHHHHHcCCcEE
Confidence 955556788999999999998876
No 37
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=99.88 E-value=8.8e-22 Score=171.67 Aligned_cols=139 Identities=20% Similarity=0.271 Sum_probs=98.7
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEE
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAV 364 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vi 364 (430)
.+||+++|++|||||||++++.+..+.... ++.+.++. ..+.+++....+.+||++|++.+..+. ..+++.+|+++
T Consensus 2 ~~ki~~vG~~~~GKSsli~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~i~D~~g~~~~~~~~--~~~~~~~~~~i 77 (166)
T 3q72_A 2 VYKVLLLGAPGVGKSALARIFGGVEDGPEA-EAAGHTYD-RSIVVDGEEASLMVYDIWEQDGGRWLP--GHCMAMGDAYV 77 (166)
T ss_dssp CCEEEEEESTTSSHHHHHHHHCCC-----------CEEE-EEEEETTEEEEEEEEECC-----------------CCEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHcCccccCCC-CccccceE-EEEEECCEEEEEEEEECCCCccchhhh--hhhhhhCCEEE
Confidence 579999999999999999999987766443 56666553 566777777888999999999998887 78899999999
Q ss_pred EEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 365 FVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 365 lv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+|||++++++|+.+..|+..+...... .++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 78 ~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 141 (166)
T 3q72_A 78 IVYSVTDKGSFEKASELRVQLRRARQT--DDVPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFI 141 (166)
T ss_dssp EEEETTCHHHHHHHHHHHHHHHHCC-----CCCEEEEEECTTCCSSCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEECCCHHHHHHHHHHHHHHHHhcCC--CCCCEEEEEeccccccccccCHHHHHHHHHHhCCcEE
Confidence 999999999999999999998876432 37999999999999875 4778999999999998876
No 38
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=99.88 E-value=4.3e-22 Score=180.08 Aligned_cols=145 Identities=16% Similarity=0.207 Sum_probs=119.0
Q ss_pred hccCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccc
Q 014101 280 QAERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAA 359 (430)
Q Consensus 280 ~~~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ 359 (430)
......+||+|+|.+|||||||+++|+++.+...+.+|.+..+ ...+.+.+....+.+||++|.+.+..++ ..+++.
T Consensus 19 ~~~~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~ 95 (201)
T 3oes_A 19 MPLVRYRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTY-SKIVTLGKDEFHLHLVDTAGQDEYSILP--YSFIIG 95 (201)
T ss_dssp ----CEEEEEEEESTTSSHHHHHHHHHHSCCCSCCCCCSEEEE-EEEEC----CEEEEEEEECCCCTTCCCC--GGGTTT
T ss_pred CCCCCcEEEEEECCCCcCHHHHHHHHHhCCCCCCCCCccceEE-EEEEEECCEEEEEEEEECCCccchHHHH--HHHHhc
Confidence 3345679999999999999999999999999888878888776 5666666667888999999999888877 789999
Q ss_pred ccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 360 CDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 360 ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+|++++|||++++++|..+..|+..+...... .++|+++|+||+|+.+. .+...++.++++.++++||
T Consensus 96 ~d~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~--~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 164 (201)
T 3oes_A 96 VHGYVLVYSVTSLHSFQVIESLYQKLHEGHGK--TRVPVVLVGNKADLSPEREVQAVEGKKLAESWGATFM 164 (201)
T ss_dssp CCEEEEEEETTCHHHHHHHHHHHHHHHC-------CCCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHhcCC--CCCCEEEEEECccCccccccCHHHHHHHHHHhCCeEE
Confidence 99999999999999999999999998876432 26899999999999865 4778999999999999876
No 39
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=99.88 E-value=4.7e-22 Score=178.35 Aligned_cols=143 Identities=17% Similarity=0.202 Sum_probs=126.2
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
....+||+|+|.+|||||||+++|++..+...+.++.+.++....+.+.+....+.+||++|.+.+..++ ..+++.+|
T Consensus 22 ~~~~~ki~v~G~~~~GKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 99 (193)
T 2oil_A 22 YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAIT--SAYYRGAV 99 (193)
T ss_dssp CSEEEEEEEESSTTSSHHHHHHHHHHSCCCSSCCCCSSEEEEEEEEEETTEEEEEEEEEESCCCTTCTTH--HHHHTTCC
T ss_pred cCcceEEEEECcCCCCHHHHHHHHhcCCCCCCCCCccceeEEEEEEEECCEEEEEEEEeCCCchhhhhhh--HHHhccCC
Confidence 4567999999999999999999999999988888898988888888888777888999999999888777 67889999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.++..+..|+..+..... .++|+++|+||+|+... .+..+++.++++.+++++|
T Consensus 100 ~vi~v~D~~~~~s~~~~~~~l~~i~~~~~---~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 165 (193)
T 2oil_A 100 GALLVFDLTKHQTYAVVERWLKELYDHAE---ATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFL 165 (193)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHTTSC---TTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhcC---CCCeEEEEEECCCcccccccCHHHHHHHHHHcCCEEE
Confidence 99999999999999999999999887543 37899999999999874 4678899999999998775
No 40
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=99.88 E-value=4.3e-22 Score=178.89 Aligned_cols=143 Identities=14% Similarity=0.262 Sum_probs=118.1
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
....+||+|+|.+|||||||+++|+++.+...+.++.+.++....+.+++....+.+||++|.+.+..++ ..+++.+|
T Consensus 23 ~~~~~ki~vvG~~~~GKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~l~Dt~G~~~~~~~~--~~~~~~~d 100 (192)
T 2il1_A 23 ADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSIT--SAYYRSAK 100 (192)
T ss_dssp CSEEEEEEEECSTTSSHHHHHHHHCC--------CCTTEEEEEEEEEETTEEEEEEEEEECCSGGGHHHH--HHHHHHCS
T ss_pred cCCceEEEEECCCCCCHHHHHHHHhcCCCCcCCCCccceeEEEEEEEECCeEEEEEEEeCCCcHHHHHHH--HHHhcCCC
Confidence 4567899999999999999999999999888888899988888888888667788999999999988887 68889999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHh-CCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFL-VMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~-g~~~f 429 (430)
++++|||++++.+++.+..|+..+...... ++|+++|+||+|+.+. .+..++++++++.+ ++++|
T Consensus 101 ~iilV~D~~~~~s~~~~~~~~~~i~~~~~~---~~piilV~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~~ 167 (192)
T 2il1_A 101 GIILVYDITKKETFDDLPKWMKMIDKYASE---DAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFC 167 (192)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHSCT---TCEEEEEEECGGGGGGCCSCHHHHHHHHHTSTTCEEE
T ss_pred EEEEEEECcCHHHHHHHHHHHHHHHHhcCC---CCcEEEEEECcccccccccCHHHHHHHHHhcCCCeEE
Confidence 999999999999999999999888776432 6899999999999774 46788899999885 66665
No 41
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=99.88 E-value=3e-22 Score=180.83 Aligned_cols=143 Identities=15% Similarity=0.209 Sum_probs=114.0
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
....+||+|+|++|||||||+++|+++.+...+.++.+.++....+.+++....+.+||++|.+.+..++ ..+++.+|
T Consensus 25 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d 102 (199)
T 2p5s_A 25 SQKAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQERFRSIA--KSYFRKAD 102 (199)
T ss_dssp ---CEEEEEESSTTSSHHHHHHHHHHCCCC----------CEEEEEEETTEEEEEEEEECTTCTTCHHHH--HHHHHHCS
T ss_pred cCCCeEEEEECcCCCCHHHHHHHHHhCCCCccCCCCccceeEEEEEEECCEEEEEEEEECCCCcchhhhH--HHHHhhCC
Confidence 3556899999999999999999999999877777888888888888888777888999999999888877 67889999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCC-------CccCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLD-------SFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~-------~~~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.++..+..|+..+...... ++|+++|+||+|+. .+.+..+++.++++.+++++|
T Consensus 103 ~iilv~d~~~~~s~~~~~~~~~~i~~~~~~---~~piilv~NK~Dl~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 174 (199)
T 2p5s_A 103 GVLLLYDVTCEKSFLNIREWVDMIEDAAHE---TVPIMLVGNKADIRDTAATEGQKCVPGHFGEKLAMTYGALFC 174 (199)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHC------CCEEEEEECGGGHHHHHHTTCCCCCHHHHHHHHHHHTCEEE
T ss_pred EEEEEEECCChHHHHHHHHHHHHHHHhcCC---CCCEEEEEECcccccccccccccccCHHHHHHHHHHcCCeEE
Confidence 999999999999999999999988776432 68999999999996 235678899999999998875
No 42
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=99.88 E-value=4.7e-22 Score=175.34 Aligned_cols=141 Identities=18% Similarity=0.296 Sum_probs=124.5
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
..+||+|+|++|||||||+++++++.+...+.++.+.++....+.+++....+.+||++|.+.+...+ ..+++.+|++
T Consensus 13 ~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~d~~ 90 (179)
T 2y8e_A 13 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLI--PSYIRDSTVA 90 (179)
T ss_dssp EEEEEEEEESTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGS--HHHHHTCSEE
T ss_pred cceEEEEECCCCCCHHHHHHHHHcCCCCCCCCCceeeEEEEEEEEECCeEEEEEEEECCCcHHHHHHH--HHHhcCCCEE
Confidence 45899999999999999999999999888888899888888888888767788999999999988877 6788999999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++|||++++.++..+..|+..+..... .++|+++|+||+|+.+. .+..+++.++++.++++++
T Consensus 91 i~v~d~~~~~s~~~~~~~~~~i~~~~~---~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 154 (179)
T 2y8e_A 91 VVVYDITNTNSFHQTSKWIDDVRTERG---SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFI 154 (179)
T ss_dssp EEEEETTCHHHHHTHHHHHHHHHHHHT---TSSEEEEEEECGGGGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHhcC---CCCcEEEEEECCcccccCcCCHHHHHHHHHHcCCeEE
Confidence 999999999999999999998877543 26899999999999764 4678899999999998775
No 43
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=99.88 E-value=3.9e-22 Score=180.38 Aligned_cols=142 Identities=18% Similarity=0.299 Sum_probs=115.4
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||+++|+++.+...+.++.+.++....+.+++....+.+||++|.+.+..++ ..+++.+|+
T Consensus 23 ~~~~ki~v~G~~~~GKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~l~Dt~G~~~~~~~~--~~~~~~~d~ 100 (200)
T 2o52_A 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVT--RSYYRGAAG 100 (200)
T ss_dssp CEEEEEEEEESTTSSHHHHHHHHHC------------CCEEEEEEEETTEEEEEEEECCTTHHHHSCCC--HHHHTTCSE
T ss_pred CcceEEEEECcCCCCHHHHHHHHHhCCCCccCCCcccceeEEEEEEECCeeeEEEEEcCCCcHhHHHHH--HHHhccCCE
Confidence 567999999999999999999999999988888898888888888888767889999999999988877 678899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.++..+..|+..+..... .++|+++|+||+|+... .+...++.++++.+++++|
T Consensus 101 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~---~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 165 (200)
T 2o52_A 101 ALLVYDITSRETYNSLAAWLTDARTLAS---PNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFL 165 (200)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHTC---TTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhcC---CCCcEEEEEECCCcccccccCHHHHHHHHHHcCCEEE
Confidence 9999999999999999999999877543 27899999999999764 4778899999999998875
No 44
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=99.88 E-value=1.9e-21 Score=173.70 Aligned_cols=143 Identities=13% Similarity=0.185 Sum_probs=124.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEE-EEEEEcCCC---------eEEEEEEeCCChhHHHhhhc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYA-VNVVDQPGG---------TKKTVVLREIPEEAVAKLLS 352 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~-~~~v~~~~~---------~~~~~i~d~~G~e~~~~~~~ 352 (430)
...+||+|+|++|||||||+++|.++.+...+.+|.+.++. ...+..++. ...+.+||++|.+.+...+
T Consensus 9 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~- 87 (195)
T 3bc1_A 9 DYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGLERFRSLT- 87 (195)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHHHHSCCCCSCCCCCSEEEEEEEEEECTTSCCCSSCCCEEEEEEEEEECCSGGGHHHH-
T ss_pred ceeEEEEEECCCCCCHHHHHHHHhcCCCCcCcccccceeeeeEEEEEecCCcccccccCcEEEEEEEeCCCcHHHHHHH-
Confidence 45689999999999999999999999888777788888877 667777755 6788999999999998887
Q ss_pred cccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 353 NKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 353 ~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
..+++.+|++++|||++++.++..+..|+..+...... .++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 88 -~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~--~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 162 (195)
T 3bc1_A 88 -TAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYS--ENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYF 162 (195)
T ss_dssp -HHTTTTCSEEEEEEETTCHHHHHTHHHHHHHHHHHSSS--SSCCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCCEE
T ss_pred -HHHHcCCCEEEEEEECCCHHHHHHHHHHHHHHHHhcCC--CCCCEEEEEECcccccccccCHHHHHHHHHHcCCCEE
Confidence 78899999999999999999999999999998876532 26899999999999874 4678899999999998775
No 45
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.87 E-value=2e-22 Score=172.29 Aligned_cols=138 Identities=17% Similarity=0.216 Sum_probs=114.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHH
Q 014101 52 KPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIE 130 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~ 130 (430)
|++++++|+++|+.||+|+||.|+.+||..+++. +|.+++.+++..+++.+ |.+++| |+|+||+.++.....
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~------d~~~~g~i~~~eF~~~~~~~~~ 73 (143)
T 2obh_A 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRA-LGFEPKKEEIKKMISEI------DKEGTGKMNFGDFLTVMTQKMS 73 (143)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHHH------TTTCCSEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHh------CCCCCCeeeHHHHHHHHHHHhc
Confidence 5778999999999999999999999999999765 58889999999999998 677888 999999998653221
Q ss_pred cCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCC
Q 014101 131 KGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPEC 210 (430)
Q Consensus 131 ~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~ 210 (430)
.....+.++.+|+.||+||+|+|+.+||+.++...+..
T Consensus 74 ------------------------------------------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~ 111 (143)
T 2obh_A 74 ------------------------------------------EKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN 111 (143)
T ss_dssp ------------------------------------------HHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCC
T ss_pred ------------------------------------------cccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC
Confidence 01123458899999999999999999999999875432
Q ss_pred C--CCCCcccccccccCCcccchhhHHhhh
Q 014101 211 P--WDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 211 ~--~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
. .....+++.+|.|+||.|+|+||+..+
T Consensus 112 ~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~ 141 (143)
T 2obh_A 112 LTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (143)
T ss_dssp CCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 2 233467789999999999999999864
No 46
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=99.87 E-value=5.8e-22 Score=182.40 Aligned_cols=142 Identities=20% Similarity=0.250 Sum_probs=119.4
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||+++|.+..+...+.++.+.++....+.+++....+.+||++|++.+..++ ..+++.+|+
T Consensus 11 ~~~~ki~v~G~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 88 (223)
T 3cpj_B 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQERYRAIT--SAYYRGAVG 88 (223)
T ss_dssp CEEEEEEEESCTTSSHHHHHHHHHHCCCCC------CCSEEEEEEEETTEEEEEEEECCTTTTTTTCCC--GGGTTTCCE
T ss_pred CeeeEEEEECcCCCCHHHHHHHHhcCCCCCCCCCcccceeEEEEEEECCEEEEEEEEECCCccchhhhH--HHHhccCCE
Confidence 556899999999999999999999999988888899998888888888667788999999999988877 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+|+|||++++.+|..+..|+..+..... .++|++||+||+|+.+. .+..+++.++++.+++++|
T Consensus 89 vilV~D~~~~~s~~~~~~~l~~i~~~~~---~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 153 (223)
T 3cpj_B 89 ALIVYDISKSSSYENCNHWLSELRENAD---DNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFT 153 (223)
T ss_dssp EEEEEC-CCHHHHHHHHHHHHHHHHHCC-----CEEEEEECCGGGGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhCC---CCCeEEEEEECcccccccccCHHHHHHHHHHcCCEEE
Confidence 9999999999999999999999887643 26899999999999764 4778899999999998875
No 47
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.87 E-value=4.5e-23 Score=177.57 Aligned_cols=139 Identities=17% Similarity=0.254 Sum_probs=115.1
Q ss_pred CccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALF 128 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~ 128 (430)
+||++++++|+++|+.||+|+||.||.+||..+++. +|..++++++..++..+ |.+++| |+|+||+..+...
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~-~~~~~~~~~~~~~~~~~------d~~~~g~i~~~ef~~~~~~~ 75 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRT-LGQNPTEAELQDLIAEA------ENNNNGQLNFTEFCGIMAKQ 75 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHH-HTCCCCHHHHHHHHHHH------HTTSTTEEEHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHh-cCCCchHHHHHHHHHhc------ccCCCCcccHHHHHHHHHHH
Confidence 589999999999999999999999999999999765 58889999999999998 567888 9999999876421
Q ss_pred HHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC
Q 014101 129 IEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP 208 (430)
Q Consensus 129 ~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~ 208 (430)
... ....+.|+++|+.||+||+|+|+.+||+.++...+
T Consensus 76 ~~~------------------------------------------~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g 113 (148)
T 2lmt_A 76 MRE------------------------------------------TDTEEEMREAFKIFDRDGDGFISPAELRFVMINLG 113 (148)
T ss_dssp TTT------------------------------------------TTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHT
T ss_pred hcc------------------------------------------cCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcC
Confidence 100 01134588999999999999999999999998654
Q ss_pred CCC--CCCCcccccccccCCcccchhhHHhh
Q 014101 209 ECP--WDEAPYKDAAEKTALGGLSLDGFLSE 237 (430)
Q Consensus 209 ~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~ 237 (430)
... .....+++.+|.|+||.|+|+||+..
T Consensus 114 ~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~ 144 (148)
T 2lmt_A 114 EKVTDEEIDEMIREADFDGDGMINYEEFVWM 144 (148)
T ss_dssp CCCCHHHHHHHHHHHCCSCCSSEEHHHHHHH
T ss_pred ccccHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence 322 22345778999999999999999975
No 48
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=99.87 E-value=6.5e-22 Score=179.04 Aligned_cols=145 Identities=19% Similarity=0.221 Sum_probs=93.8
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCC--CCCCCcCCCccceEEEEEEEcCCC--eEEEEEEeCCChhHHHhhhccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGR--PFSDNYTPTTDERYAVNVVDQPGG--TKKTVVLREIPEEAVAKLLSNKDSLA 358 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~--~~~~~~~~t~~~~~~~~~v~~~~~--~~~~~i~d~~G~e~~~~~~~~~~~~~ 358 (430)
...+||+|+|++|||||||+++|++. .+...+.+|++.++....+.+++. ...+.+||++|.+.+..++ ..+++
T Consensus 18 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~ 95 (208)
T 2yc2_C 18 TLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTAGSDLYKEQI--SQYWN 95 (208)
T ss_dssp EEEEEEEEC----------------------------------CEEEECTTSSEEEEEEEEETTTTHHHHHHH--STTCC
T ss_pred ccceEEEEECCCCCCHHHHHHHHHhCCCcccCCCCCccceEEEEEEEEECCcccEEEEEEEECCCcHHHHHHH--HHHHh
Confidence 45689999999999999999999998 777777788887787788888866 7889999999999999888 78899
Q ss_pred cccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC-c-cCcHHHHHHHHHHhCCccc
Q 014101 359 ACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDS-F-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 359 ~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~-~-~v~~~~~~~~~~~~g~~~f 429 (430)
.+|++++|||++++.+|..+..|+..+.........++|+++|+||+|+.+ . .+..+++.++++.++++++
T Consensus 96 ~~d~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~~~~~~piilv~nK~Dl~~~~~~v~~~~~~~~~~~~~~~~~ 168 (208)
T 2yc2_C 96 GVYYAILVFDVSSMESFESCKAWFELLKSARPDRERPLRAVLVANKTDLPPQRHQVRLDMAQDWATTNTLDFF 168 (208)
T ss_dssp CCCEEEEEEETTCHHHHHHHHHHHHHHHHHCSCTTSCCEEEEEEECC-------CCCHHHHHHHHHHTTCEEE
T ss_pred hCcEEEEEEECCCHHHHHHHHHHHHHHHHhhcccccCCcEEEEEECcccchhhccCCHHHHHHHHHHcCCEEE
Confidence 999999999999999999999999999886541112789999999999987 3 5778999999999998775
No 49
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=99.87 E-value=1.5e-21 Score=175.35 Aligned_cols=141 Identities=20% Similarity=0.237 Sum_probs=121.5
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
....+||+++|.+|||||||+++|+++.+...+.+|.+..+. ..+.+++....+.+||++|++.+..++ ..+++++|
T Consensus 20 ~~~~~ki~~vG~~~~GKSsl~~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 96 (194)
T 3reg_A 20 GKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFS-HVMKYKNEEFILHLWDTAGQEEYDRLR--PLSYADSD 96 (194)
T ss_dssp -CEEEEEEEECSTTSSHHHHHHHHHHSCCCSSCCCCSEEEEE-EEEEETTEEEEEEEEEECCSGGGTTTG--GGGCTTCS
T ss_pred cceeeEEEEECcCCCCHHHHHHHHhcCCCCCccCCeeeeeeE-EEEEECCEEEEEEEEECCCcHHHHHHh--HhhccCCc
Confidence 356799999999999999999999999988888788887766 456677667778999999999999887 78999999
Q ss_pred EEEEEEECCChhhHHHH-HHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC---ccCcHHHHHHHHHHhCCc-cc
Q 014101 362 IAVFVHDSSDESSWKRA-TELLVEVASYGEDTGFEVPCLIVAAKDDLDS---FAMAIQDSTRVFTFLVMV-LY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~-~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~---~~v~~~~~~~~~~~~g~~-~f 429 (430)
++++|||++++.+|..+ ..|+..+.... +++|+++|+||+|+.+ ..+..+++.++++.++++ ||
T Consensus 97 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~~----~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (194)
T 3reg_A 97 VVLLCFAVNNRTSFDNISTKWEPEIKHYI----DTAKTVLVGLKVDLRKDGSDDVTKQEGDDLCQKLGCVAYI 165 (194)
T ss_dssp EEEEEEETTCHHHHHHHHHTHHHHHHHHC----TTSEEEEEEECGGGCCTTTTCCCHHHHHHHHHHHTCSCEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHhC----CCCCEEEEEEChhhccCCCCcccHHHHHHHHHhcCCCEEE
Confidence 99999999999999997 67888887654 2689999999999976 357789999999999987 54
No 50
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=99.87 E-value=1.6e-22 Score=178.48 Aligned_cols=145 Identities=16% Similarity=0.190 Sum_probs=121.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCC-CeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPG-GTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~-~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
.+.+||+|+|++|||||||+++|.++.+...+.||++.++....+.+++ ....+.+||++|++.+..++ ..+++.+|
T Consensus 4 ~~~~ki~v~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~d 81 (178)
T 2hxs_A 4 MRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKML--DKYIYGAQ 81 (178)
T ss_dssp CCEEEEEEECCTTSSHHHHHHHHHGGGTTHHHHHTTTSSEEEEEEEETTTEEEEEEEEECTTCCTTCTTH--HHHHTTCS
T ss_pred CceEEEEEECcCCCCHHHHHHHHHhCcCCCCCCCceeEEEEEEEEEeCCCCEEEEEEEECCCCccccchh--hHHHhhCC
Confidence 4568999999999999999999999988777778888888888888885 35788899999999888877 67889999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.+++.+..|+..+...........|+++|+||+|+.+. .+..+++.++++.++++++
T Consensus 82 ~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~~~~~~~iilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 2hxs_A 82 GVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSH 150 (178)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHHHHHTCCCEEEEEEECGGGGGGCSSCHHHHHHHHHHHTCEEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHhcccCCCCeEEEEEEccccccccccCHHHHHHHHHHcCCcEE
Confidence 9999999999999999999998887642110013448999999999874 4778899999999998875
No 51
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=99.87 E-value=2.7e-21 Score=176.75 Aligned_cols=142 Identities=17% Similarity=0.258 Sum_probs=114.4
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCC--CCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhH-HHhhhcccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPF--SDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEA-VAKLLSNKDSLAA 359 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~--~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~-~~~~~~~~~~~~~ 359 (430)
...+||+|+|++|||||||+++|++... ...+ ++++.++..+.+.+++....+.+||++|.+. +..+. ..+++.
T Consensus 35 ~~~~kVvlvG~~~vGKSSLl~r~~~~~~~~~~~~-~~~g~d~~~~~i~~~~~~~~l~~~Dt~g~~~~~~~l~--~~~~~~ 111 (211)
T 2g3y_A 35 NTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDC-EVLGEDTYERTLMVDGESATIILLDMWENKGENEWLH--DHCMQV 111 (211)
T ss_dssp CCEEEEEEECCTTSSHHHHHHHHHCCCCTTCCC----CCTTEEEEEEEETTEEEEEEEECCTTTTHHHHHHH--HCCCCC
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhCCCCCCCcC-CccceeeEEEEEEECCeeeEEEEeecCCCcchhhhHH--HHHHhh
Confidence 4568999999999999999999997543 3333 5677777777888887677788999999876 44444 678899
Q ss_pred ccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 360 CDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 360 ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++++|||+++++||+.+..|+..+...... .++|+||||||+|+.+. .+..++++.++..++++||
T Consensus 112 a~~~ilVydvt~~~sf~~~~~~~~~l~~~~~~--~~~piilVgNK~DL~~~r~v~~~e~~~~a~~~~~~~~ 180 (211)
T 2g3y_A 112 GDAYLIVYSITDRASFEKASELRIQLRRARQT--EDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFI 180 (211)
T ss_dssp CSEEEEEEETTCHHHHHHHHHHHHHHHTSGGG--TTSCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEEChHHhcCceEeHHHHHHHHHHcCCEEE
Confidence 99999999999999999999999888754221 26899999999999764 4778888999999998876
No 52
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.87 E-value=4.2e-23 Score=180.32 Aligned_cols=143 Identities=15% Similarity=0.174 Sum_probs=112.2
Q ss_pred CCccHHHHHHHHHHHHhhcC--CCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDH--DRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~--d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
.+||++++++||++|..||. |+||.|+.+||+.+++. +|..++++++..++.. +.+++| |+|+||+.++
T Consensus 1 sqLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~-lG~~~t~~el~~~~~~-------d~~~~g~i~f~eFl~~~ 72 (159)
T 3i5g_C 1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRC-LGMNPTEAQVHQHGGT-------KKMGEKAYKLEEILPIY 72 (159)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHH-TTCCCCHHHHHTTTCC-------SSTTSCEECHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHH-cCCCCCHHHHHHHHcc-------cccCCCcccHHHHHHHH
Confidence 37999999999999999995 99999999999999765 6889999998876543 445677 9999999987
Q ss_pred HHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 126 ALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 126 ~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
....... .....+.|++||+.||+||+|+|+.+||+.++.
T Consensus 73 ~~~~~~~----------------------------------------~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~ 112 (159)
T 3i5g_C 73 EEMSSKD----------------------------------------TGTAADEFMEAFKTFDREGQGLISSAEIRNVLK 112 (159)
T ss_dssp HHHTTCC----------------------------------------TTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHH
T ss_pred HHhhccc----------------------------------------ccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHH
Confidence 5322100 011234589999999999999999999999998
Q ss_pred cCCCCC--CCCCcccccccc--cCCcccchhhHHhhhh
Q 014101 206 TAPECP--WDEAPYKDAAEK--TALGGLSLDGFLSEWA 239 (430)
Q Consensus 206 ~~~~~~--~~~~~~~~~~d~--~~dg~i~~~ef~~~w~ 239 (430)
..+... .....+++.+|. |+||.|+|+||+....
T Consensus 113 ~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~ 150 (159)
T 3i5g_C 113 MLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVM 150 (159)
T ss_dssp HSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHH
T ss_pred HhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHH
Confidence 764322 223457777785 8999999999998743
No 53
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=99.87 E-value=9.5e-22 Score=173.77 Aligned_cols=138 Identities=18% Similarity=0.233 Sum_probs=111.6
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
.+.+||+++|++|||||||+++|+++.+.. +.||++..+ .+.+.+++....+.+||++|++. ..+++++|+
T Consensus 5 ~~~~ki~~vG~~~vGKTsli~~l~~~~~~~-~~~t~~~~~-~~~~~~~~~~~~l~i~Dt~G~~~-------~~~~~~~d~ 75 (178)
T 2iwr_A 5 IPELRLGVLGDARSGKSSLIHRFLTGSYQV-LEKTESEQY-KKEMLVDGQTHLVLIREEAGAPD-------AKFSGWADA 75 (178)
T ss_dssp CCEEEEEEECCGGGCHHHHHHHHHHSCCCC-CSSCSSSEE-EEEEEETTEEEEEEEEECSSSCC-------HHHHHHCSE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhCCCCC-cCCCcceeE-EEEEEECCEEEEEEEEECCCCch-------hHHHHhCCE
Confidence 356899999999999999999999999876 567887655 46777776677889999999876 246688999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCC---CccCcHHHHHHHHHHh-CCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLD---SFAMAIQDSTRVFTFL-VMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~---~~~v~~~~~~~~~~~~-g~~~f 429 (430)
+++|||+++++||..+..|+..+........+++|+++|+||+|+. .+.+..+++.++++.+ +++||
T Consensus 76 ~ilv~D~~~~~s~~~~~~~~~~i~~~~~~~~~~~piilv~nK~Dl~~~~~~~v~~~~~~~~~~~~~~~~~~ 146 (178)
T 2iwr_A 76 VIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALXADMKRCSYY 146 (178)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHHCSSSCCCEEEEEEECTTCBTTBCCCSCHHHHHHHHHHHSSEEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEECccccccccCcCCHHHHHHHHHhhcCCeEE
Confidence 9999999999999999997766655432222378999999999994 2357789999999987 57665
No 54
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=99.87 E-value=2.3e-21 Score=172.62 Aligned_cols=141 Identities=18% Similarity=0.228 Sum_probs=119.3
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
..+||+++|++|||||||+++|.++.+...+.++.+. .....+.+++....+.+||++|++.+..++ ..+++.+|++
T Consensus 3 ~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~-~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~~~~ 79 (189)
T 4dsu_A 3 TEYKLVVVGADGVGKSALTIQLIQNHFVDEYDPTIED-SYRKQVVIDGETCLLDILDTAGQEEYSAMR--DQYMRTGEGF 79 (189)
T ss_dssp EEEEEEEECCTTSSHHHHHHHHHHSSCCCCCCTTCCE-EEEEEEEETTEEEEEEEEECCCC---CTTH--HHHHHHCSEE
T ss_pred cEEEEEEECCCCCCHHHHHHHHHhCCCCCCCCCCchh-eEEEEEEECCcEEEEEEEECCCcHHHHHHH--HHHHhcCCEE
Confidence 4689999999999999999999999887777667654 334566777666778899999999998887 7888999999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
++|||++++.++..+..|+..+...... .++|+++|+||+|+.+..+..+++.++++.+++++|
T Consensus 80 i~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~ 143 (189)
T 4dsu_A 80 LCVFAINNTKSFEDIHHYREQIKRVKDS--EDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFI 143 (189)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHHTTC--SCCCEEEEEECTTSSSCSSCHHHHHHHHHHHTCCEE
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHhcCC--CCCcEEEEEECccCcccccCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999998875433 379999999999999877889999999999998875
No 55
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=99.87 E-value=1.8e-21 Score=169.29 Aligned_cols=140 Identities=17% Similarity=0.237 Sum_probs=120.0
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEE
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAV 364 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vi 364 (430)
.+||+++|++|||||||++++.++.+...+.++.+..+ ...+.+++....+.+||++|++.+..++ ..+++.+|+++
T Consensus 3 ~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~D~~G~~~~~~~~--~~~~~~~~~~i 79 (167)
T 1kao_A 3 EYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFY-RKEIEVDSSPSVLEILDTAGTEQFASMR--DLYIKNGQGFI 79 (167)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHHSCCCSCCCTTCCEEE-EEEEEETTEEEEEEEEECCCTTCCHHHH--HHHHHHCSEEE
T ss_pred EEEEEEECCCCCCHHHHHHHHHcCCCcccCCCCcceeE-EEEEEECCEEEEEEEEECCCchhhHHHH--HHHhccCCEEE
Confidence 48999999999999999999999988877777776544 5667777667778899999999888877 67889999999
Q ss_pred EEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 365 FVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 365 lv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+|||++++.+++.+..|+..+...... .++|+++|+||+|+.+. ++..+++.++++.+++++|
T Consensus 80 ~v~d~~~~~s~~~~~~~~~~i~~~~~~--~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 143 (167)
T 1kao_A 80 LVYSLVNQQSFQDIKPMRDQIIRVKRY--EKVPVILVGNKVDLESEREVSSSEGRALAEEWGCPFM 143 (167)
T ss_dssp EEEETTCHHHHHHHHHHHHHHHHHTTT--SCCCEEEEEECGGGGGGCCSCHHHHHHHHHHHTSCEE
T ss_pred EEEeCCCHHHHHHHHHHHHHHHHhcCC--CCCCEEEEEECCcccccccCCHHHHHHHHHHhCCCEE
Confidence 999999999999999999988776432 27999999999999764 4778899999999998875
No 56
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=99.87 E-value=2.1e-21 Score=176.52 Aligned_cols=140 Identities=17% Similarity=0.213 Sum_probs=120.4
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||+++|.+..+...+.+|.+..+. ..+.+++....+.+||++|++.+..+. ..+++.+|+
T Consensus 26 ~~~~ki~vvG~~~vGKSsLi~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d~ 102 (205)
T 1gwn_A 26 NVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYT-ASFEIDTQRIELSLWDTSGSPYYDNVR--PLSYPDSDA 102 (205)
T ss_dssp -CEEEEEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEE-EEEESSSSEEEEEEEEECCSGGGTTTG--GGGCTTCSE
T ss_pred ceeeEEEEECCCCCCHHHHHHHHhcCCCCCCcCCccceeEE-EEEEECCEEEEEEEEeCCCcHhhhHHH--HhhccCCCE
Confidence 45689999999999999999999999998887788877664 567777778889999999999998887 678999999
Q ss_pred EEEEEECCChhhHHHH-HHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC-------------ccCcHHHHHHHHHHhC-Cc
Q 014101 363 AVFVHDSSDESSWKRA-TELLVEVASYGEDTGFEVPCLIVAAKDDLDS-------------FAMAIQDSTRVFTFLV-MV 427 (430)
Q Consensus 363 vilv~D~t~~~S~~~~-~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~-------------~~v~~~~~~~~~~~~g-~~ 427 (430)
+++|||++++.+|..+ ..|+..+.... +++|+++|+||+|+.+ +.+..+++.+++++++ ++
T Consensus 103 ~ilv~D~~~~~s~~~~~~~~~~~i~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 178 (205)
T 1gwn_A 103 VLICFDISRPETLDSVLKKWKGEIQEFC----PNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAAT 178 (205)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHHC----TTCEEEEEEECGGGGGCHHHHHHHHTTTCCCCCHHHHHHHHHHHTCSE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHHC----CCCCEEEEEechhhccchhhhhhhcccccCCCCHHHHHHHHHHcCCCE
Confidence 9999999999999998 78988887754 2689999999999974 2467889999999988 56
Q ss_pred cc
Q 014101 428 LY 429 (430)
Q Consensus 428 ~f 429 (430)
||
T Consensus 179 ~~ 180 (205)
T 1gwn_A 179 YI 180 (205)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 57
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=99.87 E-value=1.6e-21 Score=169.95 Aligned_cols=140 Identities=17% Similarity=0.244 Sum_probs=119.7
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEE
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAV 364 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vi 364 (430)
.+||+++|++|||||||++++.++.+...+.+|.+..+. ..+.+++....+.+||++|++.+..++ ..+++.+|+++
T Consensus 3 ~~ki~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~D~~G~~~~~~~~--~~~~~~~d~~i 79 (167)
T 1c1y_A 3 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDCQQCMLEILDTAGTEQFTAMR--DLYMKNGQGFA 79 (167)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHCCCCCSCCCCSEEEEE-EEEESSSCEEEEEEEEECSSCSSTTHH--HHHHHHCSEEE
T ss_pred eeEEEEECCCCCCHHHHHHHHHcCCCCCCCCCCccceEE-EEEEECCEEEEEEEEECCChHHHHHHH--HHHhccCCEEE
Confidence 589999999999999999999999888877788876654 567777777888999999998888777 67889999999
Q ss_pred EEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc-CcHHHHHHHHHHh-CCccc
Q 014101 365 FVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA-MAIQDSTRVFTFL-VMVLY 429 (430)
Q Consensus 365 lv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~-v~~~~~~~~~~~~-g~~~f 429 (430)
+|||++++.+++.+..|+..+...... .++|+++|+||+|+.+.+ +..+++.++++.+ ++++|
T Consensus 80 ~v~d~~~~~s~~~~~~~~~~i~~~~~~--~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 144 (167)
T 1c1y_A 80 LVYSITAQSTFNDLQDLREQILRVKDT--EDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFL 144 (167)
T ss_dssp EEEETTCHHHHHTHHHHHHHHHHHHCC--SCCCEEEEEECTTCGGGCCSCHHHHHHHHHHTTSCEEE
T ss_pred EEEECCCHHHHHHHHHHHHHHHHhhCc--CCCcEEEEEECccccccccCCHHHHHHHHHHccCCcEE
Confidence 999999999999999999888775322 278999999999998754 6688999999988 67665
No 58
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=99.87 E-value=2.6e-21 Score=175.25 Aligned_cols=145 Identities=16% Similarity=0.225 Sum_probs=124.5
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
+..+||+|+|.+|||||||+++|++..+...+.++.+.++....+.+++....+.+||++|++.+..++ ..+++.+|+
T Consensus 6 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 83 (207)
T 1vg8_A 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLG--VAFYRGADC 83 (207)
T ss_dssp -CEEEEEEECCTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEESSSCEEEEEEEEECSSGGGSCSC--CGGGTTCSE
T ss_pred CcceEEEEECcCCCCHHHHHHHHHcCCCCCCCCCcccceEEEEEEEECCEEEEEEEEeCCCcHHHHHhH--HHHHhCCcE
Confidence 457899999999999999999999999888888899988888888888777889999999999988877 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCC-CCCCCcEEEEEeCCCCCCccCcHHHHHHHHH-HhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGED-TGFEVPCLIVAAKDDLDSFAMAIQDSTRVFT-FLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~-~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~-~~g~~~f 429 (430)
+++|||++++.++..+..|+..+...... ...++|+++|+||+|+.+..+..+++.++++ ..++++|
T Consensus 84 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 152 (207)
T 1vg8_A 84 CVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYF 152 (207)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHHCCSSGGGSCEEEEEECTTSSCCCSCHHHHHHHHHHTTSCCEE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHhcccccCCCCcEEEEEECCCCcccccCHHHHHHHHHhcCCceEE
Confidence 99999999999999999999887765321 0126899999999999976677888999988 5666665
No 59
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=99.87 E-value=2.7e-21 Score=172.70 Aligned_cols=139 Identities=19% Similarity=0.284 Sum_probs=115.8
Q ss_pred hccCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccc
Q 014101 280 QAERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAA 359 (430)
Q Consensus 280 ~~~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ 359 (430)
......+||+|+|++|||||||+++|+++.+...+.+| +..+. ..+.+++....+.+||++|++.+. +++.
T Consensus 15 ~~~~~~~ki~ivG~~~vGKSsL~~~~~~~~~~~~~~~t-~~~~~-~~~~~~~~~~~l~i~Dt~G~~~~~-------~~~~ 85 (184)
T 3ihw_A 15 YFQGPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPE-GGRFK-KEIVVDGQSYLLLIRDEGGPPELQ-------FAAW 85 (184)
T ss_dssp -CCCCEEEEEEECCTTSCHHHHHHHHHHSSCCCCCCTT-CEEEE-EEEEETTEEEEEEEEECSSSCCHH-------HHHH
T ss_pred CCCCCeeEEEEECCCCCCHHHHHHHHhcCCCCCCcCCC-cceEE-EEEEECCEEEEEEEEECCCChhhh-------eecC
Confidence 34456799999999999999999999999988877666 33443 777888777788899999998766 5578
Q ss_pred ccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCC---CccCcHHHHHHHHHHhC-Cccc
Q 014101 360 CDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLD---SFAMAIQDSTRVFTFLV-MVLY 429 (430)
Q Consensus 360 ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~---~~~v~~~~~~~~~~~~g-~~~f 429 (430)
+|++++|||++++.||+.+..|+..+...... .++|+++|+||+|+. ...+..+++.++++.++ ++||
T Consensus 86 ~~~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~--~~~piilv~nK~Dl~~~~~~~v~~~~~~~~~~~~~~~~~~ 157 (184)
T 3ihw_A 86 VDAVVFVFSLEDEISFQTVYNYFLRLCSFRNA--SEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRCTYY 157 (184)
T ss_dssp CSEEEEEEETTCHHHHHHHHHHHHHHHTTSCG--GGSCEEEEEECTTCBTTBCCCSCHHHHHHHHHHTTTCEEE
T ss_pred CCEEEEEEECcCHHHHHHHHHHHHHHHHhcCC--CCCCEEEEEECcccccccccccCHHHHHHHHHHcCCCeEE
Confidence 99999999999999999999999999876432 268999999999994 23577899999999997 7765
No 60
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=99.87 E-value=1.5e-21 Score=172.30 Aligned_cols=142 Identities=18% Similarity=0.305 Sum_probs=121.6
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|.+|||||||+++|++..+...+.+|.+..+. ..+.+++....+.+||++|++.+..++ ..+++.+|+
T Consensus 7 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~d~ 83 (181)
T 2fn4_A 7 SETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYT-KICSVDGIPARLDILDTAGQEEFGAMR--EQYMRAGHG 83 (181)
T ss_dssp SCEEEEEEEECTTSSHHHHHHHHHHSSCCSSCCTTCCEEEE-EEEEETTEEEEEEEEECCCTTTTSCCH--HHHHHHCSE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhCcCccccCCCcCceEE-EEEEECCEEEEEEEEECCCchhhHHHH--HHHHhhCCE
Confidence 45689999999999999999999999888888788877766 667777666788899999999888777 678899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.++..+..|+..+...... .++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 84 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 149 (181)
T 2fn4_A 84 FLLVFAINDRQSFNEVGKLFTQILRVKDR--DDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYF 149 (181)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHHTS--SCCCEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhcCC--CCCCEEEEEECcccccccccCHHHHHHHHHHcCCeEE
Confidence 99999999999999999999988554322 27899999999999875 4778899999999998775
No 61
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8
Probab=99.87 E-value=3.2e-21 Score=173.01 Aligned_cols=140 Identities=21% Similarity=0.334 Sum_probs=121.0
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+++|++|||||||+++|.++.+...+.+|.+..+. ..+.+++....+.+||++|++.+..++ ..+++++|+
T Consensus 16 ~~~~ki~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~D~~G~~~~~~~~--~~~~~~~d~ 92 (194)
T 2atx_A 16 ALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYA-VSVTVGGKQYLLGLYDTAGQEDYDRLR--PLSYPMTDV 92 (194)
T ss_dssp EEEEEEEEEECTTSSHHHHHHHHHHSSCCCSCCCSSCCCEE-EEEESSSCEEEEEEECCCCSSSSTTTG--GGGCTTCSE
T ss_pred CceEEEEEECCCCCCHHHHHHHHhcCCCCCCCCCcccceeE-EEEEECCEEEEEEEEECCCCcchhHHH--HHhcCCCCE
Confidence 45689999999999999999999999888877788877663 567777677888999999999988887 788999999
Q ss_pred EEEEEECCChhhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-------------cCcHHHHHHHHHHhCC-c
Q 014101 363 AVFVHDSSDESSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-------------AMAIQDSTRVFTFLVM-V 427 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-------------~v~~~~~~~~~~~~g~-~ 427 (430)
+++|||++++++|..+. .|+..+.... +++|+++|+||+|+.+. .+..+++.++++.+++ +
T Consensus 93 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 168 (194)
T 2atx_A 93 FLICFSVVNPASFQNVKEEWVPELKEYA----PNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACC 168 (194)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHHS----TTCCEEEEEECTTSTTCHHHHHHHTTTTCCCCCHHHHHHHHHHHTCSC
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHhC----CCCCEEEEEEChhhcccccchhhcccccCcccCHHHHHHHHHHcCCcE
Confidence 99999999999999987 7988888764 26899999999999763 4678899999999997 6
Q ss_pred cc
Q 014101 428 LY 429 (430)
Q Consensus 428 ~f 429 (430)
||
T Consensus 169 ~~ 170 (194)
T 2atx_A 169 YV 170 (194)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 62
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=99.86 E-value=2.2e-21 Score=168.85 Aligned_cols=141 Identities=19% Similarity=0.296 Sum_probs=117.8
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
+.+||+++|.+|||||||++++.++.+...+.++.+..+. ..+.+++....+.+||++|.+.+..++ ..+++.+|++
T Consensus 3 ~~~~i~v~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~D~~G~~~~~~~~--~~~~~~~d~~ 79 (168)
T 1u8z_A 3 ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGEEVQIDILDTAGQEDYAAIR--DNYFRSGEGF 79 (168)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHSCCCSCCCTTCCEEEE-EEEEETTEEEEEEEEECCC---CHHHH--HHHHHHCSEE
T ss_pred ceEEEEEECCCCCCHHHHHHHHHhCccCCCCCCCcceEEE-EEEEECCEEEEEEEEECCCcchhHHHH--HHHhhcCCEE
Confidence 4589999999999999999999999888777777776654 456667666788899999999888887 6788999999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++|||+++++++..+..|+..+...... .++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 80 i~v~d~~~~~s~~~~~~~~~~i~~~~~~--~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 144 (168)
T 1u8z_A 80 LCVFSITEMESFAATADFREQILRVKED--ENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYV 144 (168)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHHHCC--TTSCEEEEEECGGGGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHhcCC--CCCcEEEEEECccccccCccCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999998876432 26899999999999765 4678899999999998775
No 63
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.86 E-value=3.1e-22 Score=173.59 Aligned_cols=139 Identities=19% Similarity=0.256 Sum_probs=110.0
Q ss_pred cccCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 46 QESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 46 ~~~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
|+..+||++++++|+++|+.||+|+||.|+.+||..+++. +|..++++++..++.. .++ |+|++|+.+
T Consensus 5 ~~~~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~-lg~~~~~~~~~~~~~~----------~~~~i~f~ef~~~ 73 (153)
T 3i5g_B 5 PRRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSS-LGRVPPDDELNAMLKE----------CPGQLNFTAFLTL 73 (153)
T ss_dssp --CTTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHH-TTSCCCHHHHHHHHHT----------SSSCCCSHHHHHT
T ss_pred ccccCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-cCCCccHHHHHHHHHh----------ccCCccHHHHHHH
Confidence 4567899999999999999999999999999999999776 6888999888777643 335 999999987
Q ss_pred HHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhh
Q 014101 125 HALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLF 204 (430)
Q Consensus 125 ~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~ 204 (430)
+.... . . ....+.|++||+.||+||+|+|+.+||+.++
T Consensus 74 ~~~~~---------------------------------~-~--------~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l 111 (153)
T 3i5g_B 74 FGEKV---------------------------------S-G--------TDPEDALRNAFSMFDEDGQGFIPEDYLKDLL 111 (153)
T ss_dssp TTTTT---------------------------------T-T--------CCCHHHHHHHHHTTCSSCSSCCCHHHHHHHH
T ss_pred HHhhh---------------------------------c-c--------cccHHHHHHHHhccccCCCCeEeHHHHHHHH
Confidence 43100 0 0 0113458999999999999999999999999
Q ss_pred ccCCCCC--CCCCcccccccccCCcccchhhHHhhh
Q 014101 205 STAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 205 ~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
...+... .....+++.+|.| ||.|+|+||+...
T Consensus 112 ~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m 146 (153)
T 3i5g_B 112 ENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIK 146 (153)
T ss_dssp HSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHH
T ss_pred HHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHh
Confidence 8764322 2234678899998 9999999999763
No 64
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=99.86 E-value=3.7e-21 Score=173.95 Aligned_cols=143 Identities=19% Similarity=0.287 Sum_probs=122.8
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
..+.+||+|+|++|||||||+++|.++.+...+.+|.+..+. ..+.+++....+.+||++|.+.+..++ ..+++.+|
T Consensus 11 ~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~~ 87 (206)
T 2bov_A 11 SLALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGEEVQIDILDTAGQEDYAAIR--DNYFRSGE 87 (206)
T ss_dssp CCCEEEEEEECSTTSSHHHHHHHHHHSCCCTTCCTTCCEEEE-EEEEETTEEEEEEEEECCCTTCCHHHH--HHHHHHCS
T ss_pred CCceEEEEEECCCCCCHHHHHHHHHhCCCCCCCCCccceEEE-EEEEECCEEEEEEEEcCCChhhhHHHH--HHHHhhCC
Confidence 456789999999999999999999999888777778776654 556677666788899999999888887 67889999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.+|..+..|+..+...... .++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 88 ~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~--~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 154 (206)
T 2bov_A 88 GFLCVFSITEMESFAATADFREQILRVKED--ENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYV 154 (206)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHHHHTTC--SCCCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhcCC--CCCCEEEEEeccCccccccccHHHHHHHHHHhCCeEE
Confidence 999999999999999999999998876532 26899999999999875 4778899999999998875
No 65
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=99.86 E-value=1.4e-21 Score=178.58 Aligned_cols=144 Identities=10% Similarity=0.128 Sum_probs=123.2
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCC----------eEEEEEEeCCChhHHHhhh
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGG----------TKKTVVLREIPEEAVAKLL 351 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~----------~~~~~i~d~~G~e~~~~~~ 351 (430)
....+||+|+|.+|||||||+++|++..+...+.+|.+.++....+.+++. ...+.+||++|++.+..++
T Consensus 22 ~~~~~ki~vvG~~~~GKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~Dt~G~~~~~~~~ 101 (217)
T 2f7s_A 22 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLT 101 (217)
T ss_dssp CSEEEEEEEESCTTSSHHHHHHHHHCSCCCCEEEEEEEEEEEEEEEEEEC-------CCEEEEEEEEEEEESHHHHHHHH
T ss_pred cceeEEEEEECcCCCCHHHHHHHHhcCCCCcCCCCceeEEEEEEEEEECCccccccccCceeEEEEEEECCCcHhHHhHH
Confidence 356799999999999999999999999987777788888877777777654 6778899999999998887
Q ss_pred ccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 352 SNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 352 ~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
..+++.+|++++|||++++.++..+..|+..+...... .++|+++|+||+|+.+. .+..++++++++.+++++|
T Consensus 102 --~~~~~~~d~iilV~D~~~~~s~~~~~~~l~~i~~~~~~--~~~piilV~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 176 (217)
T 2f7s_A 102 --TAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC--ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYF 176 (217)
T ss_dssp --HHHHTTCCEEEEEEETTCHHHHHHHHHHHHTCCCCCTT--TCCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCCEE
T ss_pred --HHHhcCCCEEEEEEECcCHHHHHHHHHHHHHHHHhcCc--CCCCEEEEEECCccccccccCHHHHHHHHHHCCCcEE
Confidence 78899999999999999999999999998887654321 27899999999999875 4678899999999998876
No 66
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=99.86 E-value=3.8e-21 Score=169.95 Aligned_cols=145 Identities=17% Similarity=0.238 Sum_probs=110.1
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcC-CCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQP-GGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~-~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
+..+||+|+|++|||||||++++++..+...+.++.+.++....+.++ +....+.+||++|++.+...+ ..+++.+|
T Consensus 6 ~~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d 83 (182)
T 1ky3_A 6 KNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLG--VAFYRGAD 83 (182)
T ss_dssp -CEEEEEEECCTTSSHHHHHHHHHHSCCCTTC---CCCSCEEEEECCSSSCCEEEEEECCC------------CCSTTCC
T ss_pred CceEEEEEECCCCCCHHHHHHHHHhCcCCcccCCccceEEEEEEEEEcCCcEEEEEEEECCCChHhhhhh--HHHhhcCC
Confidence 457899999999999999999999999888888888888888888877 446788899999999998887 78899999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCC-CCCCCcEEEEEeCCCCCCc--cCcHHHHHHHHHH-hCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGED-TGFEVPCLIVAAKDDLDSF--AMAIQDSTRVFTF-LVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~-~~~~~PiilVgnK~Dl~~~--~v~~~~~~~~~~~-~g~~~f 429 (430)
++++|||++++.+++.+..|+..+...... ...++|+++|+||+|+... .+..+++.++++. .++++|
T Consensus 84 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~v~~~~~~~~~~~~~~~~~~ 155 (182)
T 1ky3_A 84 CCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLF 155 (182)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHHCCSCTTTCCEEEEEECTTSCGGGCCSCHHHHHHHHHHTTSCCEE
T ss_pred EEEEEEECCChHHHHHHHHHHHHHHHHhcccCcCCCcEEEEEECCccccccccCCHHHHHHHHHhcCCCeEE
Confidence 999999999999999999999888765321 1137899999999999653 3678889999984 456654
No 67
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=99.86 E-value=3.6e-21 Score=173.69 Aligned_cols=142 Identities=18% Similarity=0.283 Sum_probs=111.6
Q ss_pred ccCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccc
Q 014101 281 AERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAAC 360 (430)
Q Consensus 281 ~~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~a 360 (430)
.....+||+++|.+|||||||+++|+++.+...+.+|++..+. ..+.+++....+.+||++|.+.+..++ ..+++++
T Consensus 16 ~~~~~~ki~~~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~ 92 (201)
T 2q3h_A 16 AEGRGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFS-AVVSVDGRPVRLQLCDTAGQDEFDKLR--PLCYTNT 92 (201)
T ss_dssp ----CEEEEEECSTTSSHHHHHHHHHC--------CCSSEEEE-EEEEETTEEEEEEEEECCCSTTCSSSG--GGGGTTC
T ss_pred CCCcceEEEEECCCCCCHHHHHHHHHhCCCCCCCCCcccceeE-EEEEECCEEEEEEEEECCCCHHHHHHh--HhhcCCC
Confidence 3456789999999999999999999999988777788776553 556677666778899999999988877 6789999
Q ss_pred cEEEEEEECCChhhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCCC-------------ccCcHHHHHHHHHHhCC
Q 014101 361 DIAVFVHDSSDESSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLDS-------------FAMAIQDSTRVFTFLVM 426 (430)
Q Consensus 361 d~vilv~D~t~~~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~-------------~~v~~~~~~~~~~~~g~ 426 (430)
|++++|||++++.+|..+. .|+..+..... ++|+++|+||+|+.+ ..+..+++..+++.+++
T Consensus 93 ~~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~----~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 168 (201)
T 2q3h_A 93 DIFLLCFSVVSPSSFQNVSEKWVPEIRCHCP----KAPIILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLLAEEIKA 168 (201)
T ss_dssp SEEEEEEETTCHHHHHHHHHTHHHHHHHHCS----SSCEEEEEECGGGGGCHHHHHHHHTTTCCCCCHHHHHHHHHHHTC
T ss_pred cEEEEEEECCCHHHHHHHHHHHHHHHHHhCC----CCCEEEEEECHhhhhchhhhhhhcccccccCCHHHHHHHHHhcCC
Confidence 9999999999999999997 79888887642 689999999999975 34678899999999987
Q ss_pred -ccc
Q 014101 427 -VLY 429 (430)
Q Consensus 427 -~~f 429 (430)
+||
T Consensus 169 ~~~~ 172 (201)
T 2q3h_A 169 ASYI 172 (201)
T ss_dssp SEEE
T ss_pred cEEE
Confidence 665
No 68
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.86 E-value=2.7e-21 Score=165.90 Aligned_cols=141 Identities=19% Similarity=0.300 Sum_probs=117.0
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..|++++++.++++|..||+|+||.|+.+||..+++. +|..++..++..+++.+ |.+++| |+|+||+.++..
T Consensus 2 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~------d~~~~g~i~~~eF~~~~~~ 74 (148)
T 1exr_A 2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEV------DADGNGTIDFPEFLSLMAR 74 (148)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HTCCCCHHHHHHHHHHH------CTTCSSSEEHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHH------CCCCCCcCcHHHHHHHHHh
Confidence 3589999999999999999999999999999999776 58888999999999988 677888 999999998653
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
.... ....+.++++|+.||+||+|+|+.+||+.++...
T Consensus 75 ~~~~------------------------------------------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 112 (148)
T 1exr_A 75 KMKE------------------------------------------QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL 112 (148)
T ss_dssp HHHH------------------------------------------HHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHT
T ss_pred cccC------------------------------------------CCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh
Confidence 2210 1223458899999999999999999999999875
Q ss_pred CCCC--CCCCcccccccccCCcccchhhHHhhh
Q 014101 208 PECP--WDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 208 ~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
+... .....+++.+|.|+||.|+|+||+..+
T Consensus 113 g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~ 145 (148)
T 1exr_A 113 GEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145 (148)
T ss_dssp TCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 4321 223457788999999999999999875
No 69
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.86 E-value=4.5e-22 Score=195.13 Aligned_cols=145 Identities=17% Similarity=0.314 Sum_probs=119.8
Q ss_pred cccccCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHH
Q 014101 44 FDQESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFL 122 (430)
Q Consensus 44 ~~~~~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl 122 (430)
+.|...+|+++++++|+++|+.||+|+||.|+.+||..+++. +|..+++++++.|++.+ |.+++| |+|+||+
T Consensus 289 wePs~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrs-LG~~~TeeEI~~Lf~~~------D~DgDG~IdFeEFl 361 (440)
T 3u0k_A 289 WEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEV------DADGDGTIDFPEFL 361 (440)
T ss_dssp ECCBCBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHH------CSSCSSSEEHHHHH
T ss_pred hHhhHhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHH-cCCCCCHHHHHHHHHHh------CCCCCCcCcHHHHH
Confidence 446678999999999999999999999999999999999775 68999999999999999 788889 9999999
Q ss_pred HHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 014101 123 FLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVED 202 (430)
Q Consensus 123 ~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~ 202 (430)
.++...+. .....+.|++||+.||+|++|+|+.+||+.
T Consensus 362 ~lms~~lk------------------------------------------~~d~eeeLreAFk~fDkDgdG~IS~eELr~ 399 (440)
T 3u0k_A 362 IMMARKMK------------------------------------------DTDSEEEIREAFRVFDKDGNGYISAAELRH 399 (440)
T ss_dssp HHHHTC------------------------------------------------CHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred HHHHHHhc------------------------------------------CCChHHHHHHHHHHHCCCCcCcCCHHHHHH
Confidence 88642110 001124588999999999999999999999
Q ss_pred hhccCCCCC--CCCCcccccccccCCcccchhhHHhh
Q 014101 203 LFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSE 237 (430)
Q Consensus 203 ~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~ 237 (430)
++...+... .+...+++.+|.|+||.|+|+||+..
T Consensus 400 vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkm 436 (440)
T 3u0k_A 400 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 436 (440)
T ss_dssp HHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred HHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 998654321 22345778999999999999999975
No 70
>3l0i_B RAS-related protein RAB-1A; GEF-GDF-RAB complex, GTP-binding, guanine-nucleotide exchang GDI-displacement factor; 2.85A {Homo sapiens}
Probab=99.86 E-value=1.1e-22 Score=183.79 Aligned_cols=143 Identities=20% Similarity=0.314 Sum_probs=119.7
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
....+||+|+|.+|||||||+++|++..+...+.++.+.++....+.+++....+.+||++|++.+..++ ..+++.+|
T Consensus 30 ~~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d 107 (199)
T 3l0i_B 30 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTIT--SSYYRGAH 107 (199)
T ss_dssp CSEEEEEEEECCTTSCCTTTTTSSBCCCCCCHHHHHHCCSEEEEEEEETTEEEEEEEECCTTCTTCCCCS--CC--CCCS
T ss_pred cCcceEEEEECCCCCCHHHHHHHHhcCCCCCCcCCcccceEEEEEEEECCEEEEEEEEECCCcHhHHHHH--HHHhhcCC
Confidence 3567999999999999999999999999888777888888888888888767789999999999888877 78899999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc-CcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA-MAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~-v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.+|+.+..|+..+...... ++|+++|+||+|+.+.+ +..+++.++++.+++++|
T Consensus 108 ~~i~v~d~~~~~s~~~~~~~~~~i~~~~~~---~~p~ilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 173 (199)
T 3l0i_B 108 GIIVVYDVTDQESFNNVKQWLQEIDRYASE---NVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFL 173 (199)
T ss_dssp EEEECC-CCCSHHHHHHHHHHHHHHSCC-C---CSEEEEC-CCSSCC--CCCCSCC-CHHHHTTTCCBC
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhccC---CCCEEEEEECccCCccccCCHHHHHHHHHHcCCeEE
Confidence 999999999999999999999999776532 78999999999998754 556778899999998876
No 71
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=99.86 E-value=1.2e-20 Score=168.66 Aligned_cols=141 Identities=18% Similarity=0.245 Sum_probs=111.3
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
..+||+++|.+|||||||+++|+++.+...+.++.+..+. ..+.+.+....+.+||++|.+.+..++ ..+++.+|++
T Consensus 20 ~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~~ 96 (190)
T 3con_A 20 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMR--DQYMRTGEGF 96 (190)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHHSSCCSCCCTTCCEEEE-EEEEETTEEEEEEEEECCC-------------CTTCSEE
T ss_pred ceeEEEEECcCCCCHHHHHHHHHcCCCccccCCccceEEE-EEEEECCEEEEEEEEECCChHHHHHHH--HHhhCcCCEE
Confidence 4589999999999999999999998887777677665543 566677666778899999999888877 7889999999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
++|||++++.++..+..|+..+...... .++|+++|+||+|+....+..+++.+++++++++++
T Consensus 97 i~v~d~~~~~s~~~~~~~~~~i~~~~~~--~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~ 160 (190)
T 3con_A 97 LCVFAINNSKSFADINLYREQIKRVKDS--DDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFI 160 (190)
T ss_dssp EEEEETTCHHHHHHHHHHHHHHHHHHTC--SCCCEEEEEECTTCSCCCSCHHHHHHHHHHHTCCEE
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHHhCC--CCCeEEEEEECCcCCcccCCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999888775432 268999999999998867788999999999998775
No 72
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=99.86 E-value=4.8e-21 Score=170.04 Aligned_cols=142 Identities=19% Similarity=0.288 Sum_probs=120.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
.+.+||+|+|.+|||||||++++++..+...+.++.+..+. ..+.+.+....+.+||++|++.+..++ ..+++.+|+
T Consensus 16 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 92 (187)
T 2a9k_A 16 LALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGEEVQIDILDTAGQEDYAAIR--DNYFRSGEG 92 (187)
T ss_dssp -CEEEEEEECSTTSSHHHHHHHHHHSCCCCSCCTTCCEEEE-EEEEETTEEEEEEEEECCCTTCCHHHH--HHHHHHCSE
T ss_pred CCceEEEEECCCCCCHHHHHHHHhhCCCCCcCCCccceEEE-EEEEECCEEEEEEEEECCCCcccHHHH--HHHhccCCE
Confidence 45689999999999999999999999888777777776654 456667566788899999999888877 678899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.++..+..|+..+...... .++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 93 ~i~v~d~~~~~s~~~~~~~~~~i~~~~~~--~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 158 (187)
T 2a9k_A 93 FLCVFSITEMESFAATADFREQILRVKED--ENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYV 158 (187)
T ss_dssp EEEEEETTCHHHHHHHHHHHHHHHHHHCC--TTCCEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhcCC--CCCCEEEEEECccccccCccCHHHHHHHHHHcCCeEE
Confidence 99999999999999999999998876532 26899999999999775 4678899999999998875
No 73
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=99.85 E-value=7e-21 Score=165.11 Aligned_cols=140 Identities=17% Similarity=0.235 Sum_probs=119.0
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEE
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAV 364 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vi 364 (430)
.+||+++|++|||||||++++.+..+...+.++.+..+ ...+..++....+.+||++|.+.+..++ ..+++.+|+++
T Consensus 3 ~~~i~v~G~~~~GKssl~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~G~~~~~~~~--~~~~~~~~~~i 79 (166)
T 2ce2_X 3 EYKLVVVGAGGVGKSALTIQLIQNHFVDECDPTIEDSY-RKQVVIDGETCLLDILDTAGQEEYSAMR--DQYMRTGEGFL 79 (166)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHSSCCSCCCTTCCEEE-EEEEEETTEEEEEEEEECCCCSSCCHHH--HHHHHHCSEEE
T ss_pred eeEEEEECCCCCCHHHHHHHHHhCcCccccCCccceEE-EEEEEECCEEEEEEEEECCCchhhhHHH--HHhhccCCEEE
Confidence 47999999999999999999999988777767776554 3556667666778899999998877776 67889999999
Q ss_pred EEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 365 FVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 365 lv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
+|||++++.++..+..|+..+...... .++|+++|+||+|+.+..+..+++.+++++++++++
T Consensus 80 ~v~d~~~~~~~~~~~~~~~~i~~~~~~--~~~p~iiv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~ 142 (166)
T 2ce2_X 80 CVFAINNTKSFEDIHQYREQIKRVKDS--DDVPMVLVGNKSDLAARTVESRQAQDLARSYGIPYI 142 (166)
T ss_dssp EEEETTCHHHHHHHHHHHHHHHHHHTC--SCCCEEEEEECTTCSCCCSCHHHHHHHHHHHTCCEE
T ss_pred EEEECCCHHHHHHHHHHHHHHHHhcCC--CCCcEEEEEEchhhhhcccCHHHHHHHHHHcCCeEE
Confidence 999999999999999999988776432 268999999999998877788999999999998875
No 74
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=99.85 E-value=6.1e-21 Score=174.49 Aligned_cols=140 Identities=19% Similarity=0.267 Sum_probs=100.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|++|||||||+++|+++.+...+.+|++..+. ..+.+++....+.+||++|++.+..++ ..+++.+|+
T Consensus 32 ~~~~ki~vvG~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~l~l~Dt~G~~~~~~~~--~~~~~~~d~ 108 (214)
T 2j1l_A 32 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQDDYDRLR--PLFYPDASV 108 (214)
T ss_dssp CCEEEEEEEECTTSSHHHHHHHHHC-------CCCCCEEEE-EEEEETTEEEEEEEEEC-----------------CEEE
T ss_pred cceEEEEEECcCCCCHHHHHHHHHcCCCCCCCCCccceeEE-EEEEECCEEEEEEEEECCCchhhhHHH--HHHhccCCE
Confidence 45689999999999999999999999988777777766553 556777667788999999999998887 678999999
Q ss_pred EEEEEECCChhhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-------------cCcHHHHHHHHHHhCC-c
Q 014101 363 AVFVHDSSDESSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-------------AMAIQDSTRVFTFLVM-V 427 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-------------~v~~~~~~~~~~~~g~-~ 427 (430)
+++|||++++.+|..+. .|+..+.... +++|+++|+||+|+... .+..+++.++++.+++ +
T Consensus 109 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 184 (214)
T 2j1l_A 109 LLLCFDVTSPNSFDNIFNRWYPEVNHFC----KKVPIIVVGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVA 184 (214)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHHC----SSCCEEEEEECGGGGSCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHHhC----CCCCEEEEEEChhhhccchhhhhhcccccCcccHHHHHHHHHhcCCCE
Confidence 99999999999999987 6888887754 26899999999999764 4667889999999997 6
Q ss_pred cc
Q 014101 428 LY 429 (430)
Q Consensus 428 ~f 429 (430)
||
T Consensus 185 ~~ 186 (214)
T 2j1l_A 185 YL 186 (214)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 75
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=99.85 E-value=4.1e-21 Score=172.81 Aligned_cols=141 Identities=21% Similarity=0.277 Sum_probs=118.9
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|.+|||||||+++|+++.+...+.+|.+..+. ..+.+++....+.+||++|.+. ...+ ..+++.+|+
T Consensus 26 ~~~~ki~v~G~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~Dt~G~~~-~~~~--~~~~~~~d~ 101 (196)
T 2atv_A 26 SAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYR-HQATIDDEVVSMEILDTAGQED-TIQR--EGHMRWGEG 101 (196)
T ss_dssp -CCEEEEEECCTTSSHHHHHHHHHHSCCCSCCCTTCCEEEE-EEEEETTEEEEEEEEECCCCCC-CHHH--HHHHHHCSE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHhCCCCcccCCCCCceEE-EEEEECCEEEEEEEEECCCCCc-ccch--hhhhccCCE
Confidence 45689999999999999999999999988888788876663 5566676677889999999877 4455 678899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++++|+.+..|+..+...... .++|+++|+||+|+.+. .+..+++.++++.+++++|
T Consensus 102 iilv~D~~~~~s~~~~~~~~~~i~~~~~~--~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 167 (196)
T 2atv_A 102 FVLVYDITDRGSFEEVLPLKNILDEIKKP--KNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFY 167 (196)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHHTT--SCCCEEEEEECGGGGGGCCSCHHHHHHHHHHHTSEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhhCC--CCCcEEEEEECcccccccccCHHHHHHHHHHhCCeEE
Confidence 99999999999999999999888775322 27899999999999874 5778999999999998876
No 76
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana}
Probab=99.85 E-value=4.7e-21 Score=174.54 Aligned_cols=140 Identities=18% Similarity=0.287 Sum_probs=118.8
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+++|++|||||||+++|.++.+...+.+|++..+. ..+.+++....+.+||++|++.+..++ ..+++++|+
T Consensus 7 ~~~~ki~i~G~~~~GKTsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 83 (212)
T 2j0v_A 7 SKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGQIVNLGLWDTAGQEDYSRLR--PLSYRGADI 83 (212)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHHHHSCCCSSCCCSSCCCEE-EEEECSSCEEEEEEECCCCCCCCCC----CGGGTTCSE
T ss_pred CceEEEEEECCCCCCHHHHHHHHhcCCCCccCCCccceeEE-EEEEECCEEEEEEEEECCCcHHHHHHH--HhhccCCCE
Confidence 45689999999999999999999999988777788887664 566777777889999999999988887 678999999
Q ss_pred EEEEEECCChhhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc---------CcHHHHHHHHHHhCC-ccc
Q 014101 363 AVFVHDSSDESSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA---------MAIQDSTRVFTFLVM-VLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~---------v~~~~~~~~~~~~g~-~~f 429 (430)
+++|||++++.+|..+. .|+..+.... +++|+++|+||+|+.+.. +..+++.++++.+++ +||
T Consensus 84 ~ilv~d~~~~~s~~~~~~~~~~~~~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 157 (212)
T 2j0v_A 84 FVLAFSLISKASYENVLKKWMPELRRFA----PNVPIVLVGTKLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYI 157 (212)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHHC----TTCCEEEEEECHHHHTCHHHHHTCSSCCCHHHHHHHHHHHTCSEEE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHhC----CCCCEEEEEeCHHhhhCccccccccCCCCHHHHHHHHHHcCCceEE
Confidence 99999999999999987 7998887764 268999999999997643 368899999999996 665
No 77
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=99.85 E-value=1.2e-20 Score=167.38 Aligned_cols=139 Identities=19% Similarity=0.267 Sum_probs=117.9
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
..+||+++|.+|||||||+++|.++.+...+.+|.+..+. ..+.+++....+.+||++|++.+..++ ..+++.+|++
T Consensus 4 ~~~~i~~~G~~~~GKssl~~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~~ 80 (186)
T 1mh1_A 4 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGLWDTAGQEDYDRLR--PLSYPQTDVS 80 (186)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHHSSCCSSCCCCSCCEEE-EEEEETTEEEEEEEECCCCSGGGTTTG--GGGCTTCSEE
T ss_pred cEEEEEEECCCCCCHHHHHHHHHcCCCCCCcCCcccceeE-EEEEECCEEEEEEEEECCCCHhHHHHH--HHhccCCcEE
Confidence 4689999999999999999999998888777778776554 456667667788899999999998877 6789999999
Q ss_pred EEEEECCChhhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-------------cCcHHHHHHHHHHhCC-cc
Q 014101 364 VFVHDSSDESSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-------------AMAIQDSTRVFTFLVM-VL 428 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-------------~v~~~~~~~~~~~~g~-~~ 428 (430)
++|||++++.++..+. .|+..+..... ++|+++|+||+|+.+. .+..+++.++++.+++ ++
T Consensus 81 i~v~d~~~~~s~~~~~~~~~~~~~~~~~----~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 156 (186)
T 1mh1_A 81 LICFSLVSPASFENVRAKWYPEVRHHCP----NTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKY 156 (186)
T ss_dssp EEEEETTCHHHHHHHHHTHHHHHHHHST----TSCEEEEEECHHHHTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSEE
T ss_pred EEEEECCChhhHHHHHHHHHHHHHHhCC----CCCEEEEeEcccccccchhhhhhcccccccCCHHHHHHHHHhcCCcEE
Confidence 9999999999999987 68888877642 6899999999999753 4667889999999987 66
Q ss_pred c
Q 014101 429 Y 429 (430)
Q Consensus 429 f 429 (430)
|
T Consensus 157 ~ 157 (186)
T 1mh1_A 157 L 157 (186)
T ss_dssp E
T ss_pred E
Confidence 4
No 78
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=99.85 E-value=1.7e-20 Score=169.66 Aligned_cols=140 Identities=19% Similarity=0.238 Sum_probs=119.3
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+++|.+|||||||+++|.++.+...+.++.+..+. ..+.+++....+.+||++|++.+..++ ..+++.+|+
T Consensus 23 ~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d~ 99 (201)
T 2gco_A 23 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYI-ADIEVDGKQVELALWDTAGQEDYDRLR--PLSYPDTDV 99 (201)
T ss_dssp CEEEEEEEEESTTSSHHHHHHHHHHSSCCSSCCCSSCCCCE-EEEEETTEEEEEEEECCCCSGGGTTTG--GGGCTTCSE
T ss_pred ccceEEEEECCCCCCHHHHHHHHHhCcCCcccCCcccceEE-EEEEECCEEEEEEEEECCCchhHHHHH--HHhcCCCCE
Confidence 45689999999999999999999999988888788887775 346677666788999999999998887 678999999
Q ss_pred EEEEEECCChhhHHHH-HHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-------------cCcHHHHHHHHHHhCC-c
Q 014101 363 AVFVHDSSDESSWKRA-TELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-------------AMAIQDSTRVFTFLVM-V 427 (430)
Q Consensus 363 vilv~D~t~~~S~~~~-~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-------------~v~~~~~~~~~~~~g~-~ 427 (430)
+++|||+++++++..+ ..|+..+.... +++|+++|+||+|+.+. .+..+++.++++.+++ +
T Consensus 100 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 175 (201)
T 2gco_A 100 ILMCFSIDSPDSLENIPEKWTPEVKHFC----PNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFG 175 (201)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHHS----TTCCEEEEEECGGGTTCHHHHHHHHTTTCCCCCHHHHHHHHHHTTCSE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHhC----CCCCEEEEEecHHhhcCccchhhhcccccCcCCHHHHHHHHHhCCCcE
Confidence 9999999999999998 67888777654 26899999999999764 3667889999999987 5
Q ss_pred cc
Q 014101 428 LY 429 (430)
Q Consensus 428 ~f 429 (430)
+|
T Consensus 176 ~~ 177 (201)
T 2gco_A 176 YL 177 (201)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 79
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=99.85 E-value=8.1e-21 Score=170.71 Aligned_cols=143 Identities=17% Similarity=0.257 Sum_probs=119.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|.+|||||||+++|.++.+...+.++.+..+. ..+..++....+.+||++|.+.+..++ ..+++.+|+
T Consensus 6 ~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 82 (199)
T 2gf0_A 6 SNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYR-QVISCDKSVCTLQITDTTGSHQFPAMQ--RLSISKGHA 82 (199)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHSCCCCTTSCCCCEEEE-EEEEETTEEEEEEEEECCGGGSCHHHH--HHHHHHCSE
T ss_pred CCeeEEEEECCCCCcHHHHHHHHHcCCCCCcccCcccccee-EEEEECCEEEEEEEEeCCChHHhHHHH--HHhhccCCE
Confidence 45689999999999999999999999888777777776554 455566566788899999999888877 678899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||++++.++..+..|+..+...... ..++|+++|+||+|+.+..+..+++.++++.+++++|
T Consensus 83 ~i~v~d~~~~~s~~~~~~~~~~i~~~~~~-~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~ 148 (199)
T 2gf0_A 83 FILVFSVTSKQSLEELGPIYKLIVQIKGS-VEDIPVMLVGNKCDETQREVDTREAQAVAQEWKCAFM 148 (199)
T ss_dssp EEEEEETTCHHHHHTTHHHHHHHHHHHSC-GGGSCEEEEEECTTCSSCSSCHHHHHHHHHHHTCEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEECccCCccccCHHHHHHHHHHhCCeEE
Confidence 99999999999999998888777664321 1268999999999999877888999999999998775
No 80
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=99.85 E-value=9.2e-21 Score=165.70 Aligned_cols=142 Identities=16% Similarity=0.261 Sum_probs=117.0
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
+.+||+++|++|||||||++++.++.+...+.++.+..+. ..+...+....+.+||++|.+.+..+. ..+++.+|++
T Consensus 2 ~~~~i~v~G~~~~GKssli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~~~Dt~G~~~~~~~~--~~~~~~~~~~ 78 (172)
T 2erx_A 2 NDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYR-QVISCDKSICTLQITDTTGSHQFPAMQ--RLSISKGHAF 78 (172)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHTCCCCSSCCCCSCEEEE-EEEEETTEEEEEEEEECCSCSSCHHHH--HHHHHHCSEE
T ss_pred CceEEEEECCCCCCHHHHHHHHHcCCCCCCCCCCccccEE-EEEEECCEEEEEEEEECCCchhhHHHH--HHhcccCCEE
Confidence 3589999999999999999999999887777777776554 445566566778899999998888777 6788999999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++|||++++.+++.+..|+..+....... +++|+++|+||+|+.+. .+...++..+++.+++++|
T Consensus 79 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~pii~v~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 144 (172)
T 2erx_A 79 ILVYSITSRQSLEELKPIYEQICEIKGDV-ESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFM 144 (172)
T ss_dssp EEEEETTCHHHHHTTHHHHHHHHHHHC----CCCEEEEEECGGGGGGCCSCHHHHHHHHHHHTCEEE
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEEccccccccccCHHHHHHHHHHhCCeEE
Confidence 99999999999999999988877643211 26899999999999764 4677889999999998775
No 81
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=99.84 E-value=2.4e-20 Score=167.68 Aligned_cols=142 Identities=17% Similarity=0.269 Sum_probs=110.3
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCC--CCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhH-HHhhhcccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRP--FSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEA-VAKLLSNKDSLAA 359 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~--~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~-~~~~~~~~~~~~~ 359 (430)
...+||+++|++|||||||+++|++.. +...+ ++++.++..+.+.+++....+.+||++|.+. +..+. ..+++.
T Consensus 4 ~~~~kv~lvG~~~vGKSsL~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Dt~~~~~~~~~~~--~~~~~~ 80 (192)
T 2cjw_A 4 MTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDX-EVLGEDTYERTLMVDGESATIILLDMWENKGENEWLH--DHCMQV 80 (192)
T ss_dssp CCEEEEEEECSTTSSHHHHHHHHHHHSCCC-----GGGCTTEEEEEEEETTEEEEEEEECCCCC----CTTG--GGHHHH
T ss_pred CceEEEEEECCCCCCHHHHHHHHhcCcCCcCccc-cccceeEEEEEEEECCeEEEEEEEEeccCcchhhhHH--Hhhccc
Confidence 356899999999999999999999643 33333 4567777777788887677788999999766 33344 567889
Q ss_pred ccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 360 CDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 360 ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+|++++|||+++++||+.+..|+..+...... .++|+++|+||+|+... .+..+++..++..++++||
T Consensus 81 ~~~~i~v~dv~~~~s~~~~~~~~~~l~~~~~~--~~~piilV~NK~Dl~~~r~v~~~~~~~~a~~~~~~~~ 149 (192)
T 2cjw_A 81 GDAYLIVYSITDRASFEKASELRIQLRRARQT--EDIPIILVGNKSDLVRXREVSVSEGRAXAVVFDXKFI 149 (192)
T ss_dssp CSEEEEEEETTCHHHHHHHHHHHHHHHHHTTT--SCCCEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHHhhCC--CCCeEEEEEechhhhccccccHHHHHHHHHHhCCceE
Confidence 99999999999999999999998887764321 26899999999999764 4677888899999988775
No 82
>3gj0_A GTP-binding nuclear protein RAN; G protein, GDP, acetylation, cytoplasm, HOST- virus interaction, nucleotide-binding, nucleus, phosphoprotein; HET: GDP; 1.48A {Homo sapiens} SCOP: c.37.1.8 PDB: 3gj3_A* 3gj5_A* 3gj4_A* 3gj6_A* 3gj7_A* 3gj8_A* 1i2m_A 1a2k_C 1ibr_A* 1k5d_A* 1k5g_A* 1qbk_C* 3a6p_C* 3ch5_A* 4gmx_A* 4gpt_A* 4hat_A* 4hau_A* 4hav_A* 4haw_A* ...
Probab=99.84 E-value=2.2e-21 Score=178.10 Aligned_cols=141 Identities=16% Similarity=0.203 Sum_probs=122.5
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
....+||+|+|.+|||||||+++|+.+.+...+.++.+.++....+.+.+....+.+||++|++.+..++ ..+++++|
T Consensus 12 ~~~~~ki~v~G~~~~GKSsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~~ 89 (221)
T 3gj0_A 12 PQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLR--DGYYIQAQ 89 (221)
T ss_dssp CCCEEEEEEEECTTSSHHHHHTTBHHHHHTCEEETTTTEEEEEEEEEETTEEEEEEEEEECSGGGTSCCC--HHHHTTCC
T ss_pred cccceEEEEECCCCCCHHHHHHHHHcCCCCCCCCCccceeEEEEEEEECCEEEEEEEEeCCChHHHhHHH--HHHHhcCC
Confidence 4567899999999999999999988777777777888888888888888778889999999999888877 67889999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.+|..+..|+..+.... .++|+++|+||+|+.+..+.. ++.++++.++++||
T Consensus 90 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~----~~~p~ilv~nK~Dl~~~~~~~-~~~~~~~~~~~~~~ 152 (221)
T 3gj0_A 90 CAIIMFDVTSRVTYKNVPNWHRDLVRVC----ENIPIVLCGNKVDIKDRKVKA-KSIVFHRKKNLQYY 152 (221)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHS----TTCCEEEEEECTTSSSCSSCG-GGCCHHHHHTCEEE
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHhC----CCCCEEEEEECCccccccccH-HHHHHHHHcCCEEE
Confidence 9999999999999999999999998875 268999999999998765543 67778888888775
No 83
>4djt_A GTP-binding nuclear protein GSP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, RAN family; HET: GDP; 1.80A {Encephalitozoon cuniculi}
Probab=99.84 E-value=7.3e-21 Score=174.01 Aligned_cols=142 Identities=17% Similarity=0.174 Sum_probs=119.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCe-EEEEEEeCCChhHHHhhhcccccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGT-KKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~-~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
...+||+|+|.+|||||||+++|+++.+...+.++.+.......+...++. ..+.+||++|.+.+..+. ..+++.+|
T Consensus 9 ~~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d 86 (218)
T 4djt_A 9 ELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQEKKAVLK--DVYYIGAS 86 (218)
T ss_dssp -CEEEEEEECCTTSSHHHHHCBCTTCSTTCEEETTTTEEEEEEEEEBTTSCEEEEEEEEECSGGGTSCCC--HHHHTTCS
T ss_pred cCccEEEEECCCCCCHHHHHHHHhcCCCCCCCCCccceeeEEEEEEeCCCcEEEEEEEecCCchhhchHH--HHHhhcCC
Confidence 456899999999999999999999998887777888877766666555444 778899999999888776 67889999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++++|||++++.++..+..|+..+...... ++|+++|+||+|+.+. .+..+.+.++++.+++++|
T Consensus 87 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~---~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 152 (218)
T 4djt_A 87 GAILFFDVTSRITCQNLARWVKEFQAVVGN---EAPIVVCANKIDIKNRQKISKKLVMEVLKGKNYEYF 152 (218)
T ss_dssp EEEEEEETTCHHHHHTHHHHHHHHHHHHCS---SSCEEEEEECTTCC----CCHHHHHHHTTTCCCEEE
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHHHhcCC---CCCEEEEEECCCCccccccCHHHHHHHHHHcCCcEE
Confidence 999999999999999999999998876532 5899999999999876 5778889999999988775
No 84
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.84 E-value=9.3e-21 Score=164.29 Aligned_cols=153 Identities=18% Similarity=0.259 Sum_probs=121.6
Q ss_pred CCccccccCCccHHHHHHHHHHHHhhcCCC-CCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCH
Q 014101 41 GPLFDQESQALKPRCVRALKRIFILCDHDR-DGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTL 118 (430)
Q Consensus 41 ~~l~~~~~~~lt~~~~~~l~~~F~~~D~d~-dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~ 118 (430)
.|.+......|++++++.++++|..+|+|+ ||.|+.+||..++.. +|..++.+++..+++.+ |.+++| |+|
T Consensus 2 ~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~------D~~~~g~i~~ 74 (161)
T 1dtl_A 2 DDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQNPTPEELQEMIDEV------DEDGSGTVDF 74 (161)
T ss_dssp ---CTTGGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHH-TTCCCCHHHHHHHHHHH------CTTSSSSBCH
T ss_pred cHHHHHHHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHh------CCCCCCeEcH
Confidence 466667778899999999999999999999 999999999999776 58889999999999998 677888 999
Q ss_pred HhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHH
Q 014101 119 AGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPI 198 (430)
Q Consensus 119 ~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~ 198 (430)
+||+.++....... ......+.++.+|+.||+|++|.|+.+
T Consensus 75 ~eF~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~F~~~D~d~~G~i~~~ 115 (161)
T 1dtl_A 75 DEFLVMMVRSMKDD---------------------------------------SKGKSEEELSDLFRMFDKNADGYIDLE 115 (161)
T ss_dssp HHHHHHHHHHHC--------------------------------------------CHHHHHHHHHHHHCTTCSSEEEHH
T ss_pred HHHHHHHHHHhccc---------------------------------------ccchHHHHHHHHHHHhCCCCCCcCcHH
Confidence 99999875432100 001123458899999999999999999
Q ss_pred HHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 199 EVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 199 el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
||+.++...+... .....+++.+|.|+||.|+|+||+..+.
T Consensus 116 El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 158 (161)
T 1dtl_A 116 ELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158 (161)
T ss_dssp HHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 9999998754221 2224567889999999999999998864
No 85
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.84 E-value=1.5e-20 Score=164.47 Aligned_cols=145 Identities=15% Similarity=0.196 Sum_probs=119.1
Q ss_pred ccCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 47 ESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 47 ~~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
....|++++++.|+++|+.+|+|+||.|+.+||..++.. +|.+++.+++..++..+ |.+++| |+|+||+.++
T Consensus 18 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~------d~~~~g~i~~~eF~~~~ 90 (169)
T 3qrx_A 18 GRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRA-LGFEPKKEEIKKMISEI------DKDGSGTIDFEEFLTMM 90 (169)
T ss_dssp --CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHH-TSCCCCHHHHHHHHHHH------CSSSSSSEEHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHh------cCCCCCcCCHHHHHHHH
Confidence 356789999999999999999999999999999999765 58889999999999998 678888 9999999986
Q ss_pred HHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 126 ALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 126 ~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
..... .....+.+..+|+.||+|++|.|+.+||+.++.
T Consensus 91 ~~~~~------------------------------------------~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~ 128 (169)
T 3qrx_A 91 TAKMG------------------------------------------ERDSREEILKAFRLFDDDNSGTITIKDLRRVAK 128 (169)
T ss_dssp HHHHH------------------------------------------HHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHhc------------------------------------------ccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 53221 012234588999999999999999999999998
Q ss_pred cCCCCC--CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 206 TAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 206 ~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
..+... .....+++.+|.|+||.|+|+||+..+.-
T Consensus 129 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 129 ELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred HcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 754321 22345778999999999999999988653
No 86
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=99.83 E-value=3.7e-21 Score=170.28 Aligned_cols=140 Identities=19% Similarity=0.315 Sum_probs=103.3
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+++|++|||||||++++.++.+...+.+|++..+. ..+.+.+....+.+||++|++.+..++ ..+++++|+
T Consensus 6 ~~~~ki~v~G~~~~GKssl~~~~~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 82 (182)
T 3bwd_D 6 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVNGATVNLGLWDTAGQEDYNRLR--PLSYRGADV 82 (182)
T ss_dssp -CCCEEEEECSTTSSHHHHHHHHHHSCCC----------CB-CCCC-------CEEECCCC-CTTTTTG--GGGGTTCSE
T ss_pred CceEEEEEECCCCCCHHHHHHHHhcCCCCCCCCCeeeeeEE-EEEEECCEEEEEEEEECCCChhhhhhH--HhhccCCCE
Confidence 34589999999999999999999998887777777765543 233445455667799999999988887 788999999
Q ss_pred EEEEEECCChhhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc-----------CcHHHHHHHHHHhCC-ccc
Q 014101 363 AVFVHDSSDESSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA-----------MAIQDSTRVFTFLVM-VLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~-----------v~~~~~~~~~~~~g~-~~f 429 (430)
+++|||++++.+|+.+. .|+..+.... +++|+++|+||+|+.+.+ +..+++.++++.+++ +||
T Consensus 83 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 158 (182)
T 3bwd_D 83 FILAFSLISKASYENVSKKWIPELKHYA----PGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYI 158 (182)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHHC----TTCCEEEEEECHHHHTCHHHHHHC--CCCCCHHHHHHHHHHHTCSEEE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHhC----CCCCEEEEEechhhhcCcccccccccCCCCCHHHHHHHHHHcCCCEEE
Confidence 99999999999999997 6888887764 268999999999997643 367889999999996 665
No 87
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=99.83 E-value=3.3e-20 Score=168.33 Aligned_cols=140 Identities=20% Similarity=0.241 Sum_probs=116.4
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
.+.+||+++|.+|||||||+++|+++.+...+.++.+..+ ...+.+++....+.+||++|.+.+..++ ..+++.+|+
T Consensus 28 ~~~~ki~vvG~~~~GKSsLi~~l~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d~ 104 (204)
T 4gzl_A 28 GQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPVNLGLWDTAGLEDYDRLR--PLSYPQTDV 104 (204)
T ss_dssp --CEEEEEEESTTSSHHHHHHHHHHSCCCC-CCCCSEEEE-EEEEECC-CEEEEEEEEECCSGGGTTTG--GGGCTTCSE
T ss_pred CCeEEEEEECcCCCCHHHHHHHHHhCCCCCCcCCeeccee-EEEEEECCEEEEEEEEECCCchhhHHHH--HHHhccCCE
Confidence 4568999999999999999999999988877767776444 4667778777888899999999998887 779999999
Q ss_pred EEEEEECCChhhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc-------------CcHHHHHHHHHHhCCc-
Q 014101 363 AVFVHDSSDESSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA-------------MAIQDSTRVFTFLVMV- 427 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~-------------v~~~~~~~~~~~~g~~- 427 (430)
+++|||++++.+|..+. .|+..+.... +++|+++|+||+|+.+.. +..+++..+++.+++.
T Consensus 105 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 180 (204)
T 4gzl_A 105 FLICFSLVSPASFENVRAKWYPEVRHHC----PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVK 180 (204)
T ss_dssp EEEEEETTCHHHHHHHHHTHHHHHHHHC----SSCCEEEEEECHHHHTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSE
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHhC----CCCCEEEEEechhhccchhhhhhhhccccccccHHHHHHHHHhcCCcE
Confidence 99999999999999997 7888887765 268999999999997642 6678899999999864
Q ss_pred cc
Q 014101 428 LY 429 (430)
Q Consensus 428 ~f 429 (430)
+|
T Consensus 181 ~~ 182 (204)
T 4gzl_A 181 YL 182 (204)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 88
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=99.83 E-value=4.1e-20 Score=167.89 Aligned_cols=139 Identities=22% Similarity=0.267 Sum_probs=111.8
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
..+||+++|.+|||||||+++|.++.+...+.++.+..+.. .+.+++....+.+||++|++.+..++ ..+++.+|++
T Consensus 24 ~~~ki~vvG~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~~-~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~~ 100 (207)
T 2fv8_A 24 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQEDYDRLR--PLSYPDTDVI 100 (207)
T ss_dssp EEEEEEEEECTTSSHHHHHHHHHHSSCC-------CCEEEE-EEEETTEEEEEEEEECTTCTTCTTTG--GGGCTTCCEE
T ss_pred cCcEEEEECcCCCCHHHHHHHHhcCCCCCcCCCcccceEEE-EEEECCEEEEEEEEECCCcHHHHHHH--HhhcCCCCEE
Confidence 45899999999999999999999999888777888776654 46677666788999999999888877 6789999999
Q ss_pred EEEEECCChhhHHHH-HHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-------------cCcHHHHHHHHHHhCC-cc
Q 014101 364 VFVHDSSDESSWKRA-TELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-------------AMAIQDSTRVFTFLVM-VL 428 (430)
Q Consensus 364 ilv~D~t~~~S~~~~-~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-------------~v~~~~~~~~~~~~g~-~~ 428 (430)
++|||++++.+|..+ ..|+..+.... +++|+++|+||+|+... .+..+++.++++.+++ ++
T Consensus 101 i~v~d~~~~~s~~~~~~~~~~~~~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 176 (207)
T 2fv8_A 101 LMCFSVDSPDSLENIPEKWVPEVKHFC----PNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDY 176 (207)
T ss_dssp EEEEETTCHHHHHHHHHTHHHHHHHHS----TTCCEEEEEECGGGGGCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSEE
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHhC----CCCCEEEEEEchhhhccccchhhhhhcccCCCCHHHHHHHHHhcCCCEE
Confidence 999999999999998 67888877654 26899999999999764 3667889999999887 55
Q ss_pred c
Q 014101 429 Y 429 (430)
Q Consensus 429 f 429 (430)
|
T Consensus 177 ~ 177 (207)
T 2fv8_A 177 L 177 (207)
T ss_dssp E
T ss_pred E
Confidence 4
No 89
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.83 E-value=3.1e-20 Score=160.84 Aligned_cols=143 Identities=18% Similarity=0.210 Sum_probs=119.5
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...|++++++.|+++|..+|+|+||.|+.+||..++.. +|.+++.+++..+++.+ |.+++| |+|+||+.++.
T Consensus 14 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~------d~~~~g~i~~~eF~~~~~ 86 (161)
T 3fwb_A 14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKA-LGFELPKREILDLIDEY------DSEGRHLMKYDDFYIVMG 86 (161)
T ss_dssp TTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHH------CTTSSSCEEHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHh------CcCCCCeEeHHHHHHHHH
Confidence 45689999999999999999999999999999999776 68899999999999998 677888 99999999875
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
...... ...+.++.+|+.||+|++|.|+.+||+.++..
T Consensus 87 ~~~~~~------------------------------------------~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~ 124 (161)
T 3fwb_A 87 EKILKR------------------------------------------DPLDEIKRAFQLFDDDHTGKISIKNLRRVAKE 124 (161)
T ss_dssp HHHHTC------------------------------------------CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHhcC------------------------------------------CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHH
Confidence 332110 12345889999999999999999999999987
Q ss_pred CCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 207 APECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 207 ~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+... .....+++.+|.|++|.|+|+||+..+.
T Consensus 125 ~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 125 LGETLTDEELRAMIEEFDLDGDGEINENEFIAICT 159 (161)
T ss_dssp TTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred hCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 54322 2234577899999999999999998754
No 90
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=99.83 E-value=6e-21 Score=170.99 Aligned_cols=139 Identities=20% Similarity=0.141 Sum_probs=109.5
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCc-----------CCCccceEEEEEE-EcCCCeEEEEEEeCCChhHHHhh
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNY-----------TPTTDERYAVNVV-DQPGGTKKTVVLREIPEEAVAKL 350 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~-----------~~t~~~~~~~~~v-~~~~~~~~~~i~d~~G~e~~~~~ 350 (430)
...+||+|+|++|||||||++.+.+ .+...+ .+|.+.++....+ .+++....+.+||++|++.+..+
T Consensus 12 ~~~~ki~vvG~~~~GKssL~~~l~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~ 90 (198)
T 3t1o_A 12 EINFKIVYYGPGLSGKTTNLKWIYS-KVPEGRKGEMVSLATEDERTLFFDFLPLDIGEVKGFKTRFHLYTVPGQVFYNAS 90 (198)
T ss_dssp EEEEEEEEECSTTSSHHHHHHHHHH-TSCGGGBCCCEEEECSSCEEEEEEECCSSCCCSSSCEEEEEEEECCSCCSCSHH
T ss_pred ccccEEEEECCCCCCHHHHHHHHHh-hccccccccccccccccccceeeeecccccccccCCceEEEEEeCCChHHHHHH
Confidence 4568999999999999999966654 444332 2344444443334 45556778899999999998888
Q ss_pred hccccccccccEEEEEEECC------ChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHh
Q 014101 351 LSNKDSLAACDIAVFVHDSS------DESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFL 424 (430)
Q Consensus 351 ~~~~~~~~~ad~vilv~D~t------~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~ 424 (430)
+ ..+++++|++++|||++ +.++|..+..|+..+.... .++|+++|+||+|+.+ .+..+++.++++.+
T Consensus 91 ~--~~~~~~~d~~i~v~D~~~~~~~~~~~s~~~l~~~l~~~~~~~----~~~piilv~NK~Dl~~-~~~~~~~~~~~~~~ 163 (198)
T 3t1o_A 91 R--KLILRGVDGIVFVADSAPNRLRANAESMRNMRENLAEYGLTL----DDVPIVIQVNKRDLPD-ALPVEMVRAVVDPE 163 (198)
T ss_dssp H--HHHTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCT----TSSCEEEEEECTTSTT-CCCHHHHHHHHCTT
T ss_pred H--HHHHhcCCEEEEEEECCcchhhHhHHHHHHHHHHHHhhcccc----CCCCEEEEEEchhccc-ccCHHHHHHHHHhc
Confidence 8 78899999999999999 5678888888988874322 3799999999999987 47789999999999
Q ss_pred CC-ccc
Q 014101 425 VM-VLY 429 (430)
Q Consensus 425 g~-~~f 429 (430)
++ ++|
T Consensus 164 ~~~~~~ 169 (198)
T 3t1o_A 164 GKFPVL 169 (198)
T ss_dssp CCSCEE
T ss_pred CCceEE
Confidence 98 765
No 91
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=99.83 E-value=1.3e-19 Score=162.89 Aligned_cols=124 Identities=20% Similarity=0.193 Sum_probs=99.0
Q ss_pred ccCceeEEEEeCCCCCCHHHHHHHHhCCCCCC-CcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccc
Q 014101 281 AERNVFQCFVFGPKKAGKSVLLNSFLGRPFSD-NYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAA 359 (430)
Q Consensus 281 ~~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~-~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ 359 (430)
...+..||+|+|.+|||||||+++|++..+.. .+.+|.+... ..+. +....+.+||++|++.+..++ ..+++.
T Consensus 13 ~~~~~~ki~v~G~~~~GKSsl~~~l~~~~~~~~~~~~t~~~~~--~~~~--~~~~~~~i~Dt~G~~~~~~~~--~~~~~~ 86 (199)
T 4bas_A 13 QSKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVGYNV--ETFE--KGRVAFTVFDMGGAKKFRGLW--ETYYDN 86 (199)
T ss_dssp ---CEEEEEEECCTTSCHHHHHHHHSCCC----CCCCCSSEEE--EEEE--ETTEEEEEEEECCSGGGGGGG--GGGCTT
T ss_pred CCCCCcEEEEECCCCCCHHHHHHHHhcCCCcccccccccceeE--EEEE--eCCEEEEEEECCCCHhHHHHH--HHHHhc
Confidence 34567899999999999999999999999988 6678887433 3444 346788999999999999888 788999
Q ss_pred ccEEEEEEECCChhhHHHHHHHHHHHHhcCCC-----CCCCCcEEEEEeCCCCCCc
Q 014101 360 CDIAVFVHDSSDESSWKRATELLVEVASYGED-----TGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 360 ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~-----~~~~~PiilVgnK~Dl~~~ 410 (430)
+|++|+|||+++++||..+..|+..+...... ...++|+++|+||+|+...
T Consensus 87 ~d~ii~v~D~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~piilv~NK~Dl~~~ 142 (199)
T 4bas_A 87 IDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGRVPFLFFANKMDAAGA 142 (199)
T ss_dssp CSEEEEEEETTCGGGHHHHHHHHHHHHTSHHHHSBCTTSCBCCEEEEEECTTSTTC
T ss_pred CCEEEEEEECCcHHHHHHHHHHHHHHHhChhhhhcccccCCCCEEEEEECcCCCCC
Confidence 99999999999999999999999988764210 0026899999999999875
No 92
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=99.83 E-value=7.9e-21 Score=169.38 Aligned_cols=137 Identities=11% Similarity=0.040 Sum_probs=101.4
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCC--CCCCCcCCCccceEEEEEEEc---CCCeEEEEEEeCCChhHHHhhhcccccccc
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGR--PFSDNYTPTTDERYAVNVVDQ---PGGTKKTVVLREIPEEAVAKLLSNKDSLAA 359 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~--~~~~~~~~t~~~~~~~~~v~~---~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ 359 (430)
.+||+++|++|||||||+++|++. .+...+.+|++.++....+.+ .+....+.+||++|++.+..+. ..+++.
T Consensus 2 ~~kv~ivG~~gvGKStLl~~l~~~~~~~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~i~Dt~G~~~~~~~~--~~~~~~ 79 (184)
T 2zej_A 2 RMKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDFAGREEFYSTH--PHFMTQ 79 (184)
T ss_dssp -CEEEEESCTTSSHHHHHHHHTCC-----------CSEEEEEEEC---------CEEEEEEECSHHHHHTTS--HHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHhcCCCccCCCcceeccEEeEEeeeccccCCCCceEEEEEecCCCHHHHHhh--HHHccC
Confidence 479999999999999999999985 455556678887776555544 2245678899999999998877 678899
Q ss_pred ccEEEEEEECCCh-hhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCc----HHHHHHHHHHhCCc
Q 014101 360 CDIAVFVHDSSDE-SSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMA----IQDSTRVFTFLVMV 427 (430)
Q Consensus 360 ad~vilv~D~t~~-~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~----~~~~~~~~~~~g~~ 427 (430)
++++++|||++++ .+|..+..|+..+.... +++|+++||||+|+.+.+.. .+.++++++.++++
T Consensus 80 ~~~~i~v~d~~~~~~s~~~~~~~~~~~~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 148 (184)
T 2zej_A 80 RALYLAVYDLSKGQAEVDAMKPWLFNIKARA----SSSPVILVGTHLDVSDEKQRKACMSKITKELLNKRGFP 148 (184)
T ss_dssp SEEEEEEEEGGGCHHHHHTHHHHHHHHHHHC----TTCEEEEEEECGGGCCHHHHHHHHHHHHHHTTTCTTSC
T ss_pred CcEEEEEEeCCcchhHHHHHHHHHHHHHhhC----CCCcEEEEEECCCcccchhhHHHHHHHHHHHHHhcCCc
Confidence 9999999999997 58999999999987653 26899999999999875321 35567777777776
No 93
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=99.83 E-value=1.2e-19 Score=162.25 Aligned_cols=132 Identities=20% Similarity=0.240 Sum_probs=106.0
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCC-CCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRP-FSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~-~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
...+||+|+|.+|||||||+++|++.. +...+.+|.+ +....+.+++ ..+.+||++|++.+..++ ..+++++|
T Consensus 19 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~t~~--~~~~~~~~~~--~~~~l~Dt~G~~~~~~~~--~~~~~~~d 92 (190)
T 2h57_A 19 SKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIG--FSIEKFKSSS--LSFTVFDMSGQGRYRNLW--EHYYKEGQ 92 (190)
T ss_dssp --CEEEEEEECTTSSHHHHHHHTSCGGGCCSSCCCCSS--EEEEEEECSS--CEEEEEEECCSTTTGGGG--GGGGGGCS
T ss_pred CCccEEEEECCCCCCHHHHHHHHhcCCCCCCCcCCccc--eeEEEEEECC--EEEEEEECCCCHHHHHHH--HHHHhcCC
Confidence 456899999999999999999999988 5555656766 4456677763 678899999999998887 78899999
Q ss_pred EEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHH
Q 014101 362 IAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVF 421 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~ 421 (430)
++++|||++++.+|..+..|+..+.........++|+++|+||+|+.+ .+..+++.+++
T Consensus 93 ~ii~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~-~~~~~~~~~~~ 151 (190)
T 2h57_A 93 AIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRD-AVTSVKVSQLL 151 (190)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHHHHSTTTTTSCCCEEEEEECTTSTT-CCCHHHHHHHH
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHhChhhccCCCeEEEEEeCcCccc-CCCHHHHHHHh
Confidence 999999999999999999999998876432112789999999999976 34455565555
No 94
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.82 E-value=2.1e-20 Score=160.19 Aligned_cols=145 Identities=16% Similarity=0.261 Sum_probs=117.1
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..|++++++.|+++|+.+|.|+||.|+.+||..++.. +|..++.+++..+++.+ |.+++| |+|+||+.++..
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~------d~~~~g~i~~~eF~~~~~~ 75 (153)
T 3ox6_A 3 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRT-MGYMPTEMELIELSQQI------NMNLGGHVDFDDFVELMGP 75 (153)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHH-TTCCCCHHHHHHHHHHH------HTTSTTCCCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHh------CCCCCccCcHHHHHHHHHH
Confidence 5689999999999999999999999999999999776 58889999999999998 566778 999999998753
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc-
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST- 206 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~- 206 (430)
....... .....+.++.+|+.||+|++|.|+.+||+.++..
T Consensus 76 ~~~~~~~--------------------------------------~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~ 117 (153)
T 3ox6_A 76 KLLAETA--------------------------------------DMIGVKELRDAFREFDTNGDGEISTSELREAMRAL 117 (153)
T ss_dssp HHTTCCH--------------------------------------HHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred Hhhcccc--------------------------------------ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 2211000 0112355889999999999999999999999976
Q ss_pred CCCCC--CCCCcccccccccCCcccchhhHHhhh
Q 014101 207 APECP--WDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 207 ~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
.+... .....+++.+|.|+||.|+|+||+..+
T Consensus 118 ~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~ 151 (153)
T 3ox6_A 118 LGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 151 (153)
T ss_dssp HSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHT
T ss_pred hcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 33221 223457789999999999999999875
No 95
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=99.82 E-value=6.6e-20 Score=163.85 Aligned_cols=124 Identities=14% Similarity=0.229 Sum_probs=102.7
Q ss_pred hhccCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccc
Q 014101 279 QQAERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLA 358 (430)
Q Consensus 279 ~~~~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~ 358 (430)
....+..+||+|+|.+|||||||+++|+++.+...+.+|.+.++. .+.. ....+.+||++|++.+..++ ..+++
T Consensus 16 ~~~~~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~--~~~~--~~~~~~l~Dt~G~~~~~~~~--~~~~~ 89 (188)
T 1zd9_A 16 PRGSKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMR--KITK--GNVTIKLWDIGGQPRFRSMW--ERYCR 89 (188)
T ss_dssp ---CCEEEEEEEECSTTSSHHHHHHHHHHSCCCCSCCCCCSEEEE--EEEE--TTEEEEEEEECCSHHHHTTH--HHHHT
T ss_pred ccCCCCccEEEEECCCCCCHHHHHHHHHcCCCCCccCCCCceeEE--EEEe--CCEEEEEEECCCCHhHHHHH--HHHHc
Confidence 344466799999999999999999999999888777788887664 3333 35778899999999998887 67889
Q ss_pred cccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 359 ACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 359 ~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
.+|++++|||+++++++..+..|+..+...... .++|+++|+||+|+...
T Consensus 90 ~~d~ii~v~D~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~NK~Dl~~~ 139 (188)
T 1zd9_A 90 GVSAIVYMVDAADQEKIEASKNELHNLLDKPQL--QGIPVLVLGNKRDLPGA 139 (188)
T ss_dssp TCSEEEEEEETTCGGGHHHHHHHHHHHHTCGGG--TTCCEEEEEECTTSTTC
T ss_pred cCCEEEEEEECCCHHHHHHHHHHHHHHHhCccc--CCCCEEEEEECCCCccC
Confidence 999999999999999999999999988764221 27999999999999874
No 96
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.82 E-value=2e-20 Score=158.85 Aligned_cols=137 Identities=18% Similarity=0.317 Sum_probs=113.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHH
Q 014101 52 KPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIE 130 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~ 130 (430)
|+++++.|+++|+.+|+|+||.|+.+||..++.. +|.+++.+++..+++.+ |.+++| |+|+||+.++.....
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~------d~~~~g~i~~~eF~~~~~~~~~ 73 (142)
T 2bl0_C 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQ-FGVRVEPAAFNEMFNEA------DATGNGKIQFPEFLSMMGRRMK 73 (142)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HTCCCCHHHHHHHHHHH------CTTCSSEEEHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CcCCCCeeeHHHHHHHHHHHhc
Confidence 4678999999999999999999999999999776 58899999999999998 677888 999999998753221
Q ss_pred cCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCC
Q 014101 131 KGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPEC 210 (430)
Q Consensus 131 ~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~ 210 (430)
. ....+.++.+|+.||+|++|.|+.+||+.++...+..
T Consensus 74 ~------------------------------------------~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~ 111 (142)
T 2bl0_C 74 Q------------------------------------------TTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDR 111 (142)
T ss_dssp T------------------------------------------CCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSC
T ss_pred C------------------------------------------CChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCC
Confidence 0 0112458899999999999999999999999875422
Q ss_pred C--CCCCcccccccccCCcccchhhHHhhh
Q 014101 211 P--WDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 211 ~--~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
. .....+++.+| |+||.|+|+||+..+
T Consensus 112 ~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~ 140 (142)
T 2bl0_C 112 LKPHEFAEFLGITE-TEKGQIRYDNFINTM 140 (142)
T ss_dssp CCHHHHHHHHHHHC-CSSSEECSHHHHTTT
T ss_pred CCHHHHHHHHHHhC-CCCCcEeHHHHHHHH
Confidence 1 22345778899 999999999999875
No 97
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=99.82 E-value=2e-19 Score=162.29 Aligned_cols=141 Identities=18% Similarity=0.250 Sum_probs=119.2
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
..+||+++|++|||||||++++.+..+...+.|+.+.++....+.++|....+.+||++|++.+..+. ..+++.++++
T Consensus 4 ~~~kv~lvG~~g~GKSTLl~~l~~~~~~~~~~~t~~~~~~~~~i~~~g~~~~~~i~Dt~g~~~~~~~~--~~~~~~~~~~ 81 (199)
T 2f9l_A 4 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRRIT--SAYYRGAVGA 81 (199)
T ss_dssp EEEEEEEESSTTSSHHHHHHHHHHSCCCC---CCCSCEEEEEEEEETTEEEEEEEEECSSGGGTTCCC--HHHHTTCSEE
T ss_pred ceEEEEEECcCCCCHHHHHHHHhcCCCCCCCCCccceeEEEEEEEECCEEEEEEEEECCCchhhhhhh--HHHHhcCCEE
Confidence 46899999999999999999999999888888899888888888888766778899999998887766 6677899999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
++|||+++..++..+..|+..+..... .+.|+++|+||+|+.+. .+...++..++...++.++
T Consensus 82 i~v~d~~~~~s~~~~~~~~~~~~~~~~---~~~~i~~v~nK~Dl~~~~~~~~~~a~~l~~~~~~~~~ 145 (199)
T 2f9l_A 82 LLVYDIAKHLTYENVERWLKELRDHAD---SNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFI 145 (199)
T ss_dssp EEEEETTCHHHHHTHHHHHHHHHHHSC---TTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHhcC---CCCeEEEEEECcccccccCcCHHHHHHHHHHcCCeEE
Confidence 999999999999999999988765432 26899999999999874 4667889999999888765
No 98
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.82 E-value=6e-20 Score=156.39 Aligned_cols=140 Identities=19% Similarity=0.302 Sum_probs=116.5
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..|++++++.++++|+.+|+|+||.|+.+||..++.. +|.+++.+++..+++.+ |.+++| |+|+||+.++..
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~------d~~~~g~i~~~ef~~~~~~ 75 (147)
T 4ds7_A 3 QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRS-LGLSPSEAEVADLMNEI------DVDGNHAIEFSEFLALMSR 75 (147)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-TTCCCCHHHHHHHHHHH------CTTSSSEEEHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-hCCCCCHHHHHHHHHHh------ccCCCCcCcHHHHHHHHHH
Confidence 5689999999999999999999999999999999766 68899999999999998 677888 999999998653
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
... .....+.++.+|+.||+|++|.|+.+||+.++...
T Consensus 76 ~~~------------------------------------------~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~ 113 (147)
T 4ds7_A 76 QLK------------------------------------------CNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI 113 (147)
T ss_dssp HHH------------------------------------------THHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT
T ss_pred hcc------------------------------------------CCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHc
Confidence 221 01233568899999999999999999999999875
Q ss_pred CCCC--CCCCcccccccccCCcccchhhHHhhh
Q 014101 208 PECP--WDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 208 ~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
+... .....+++.+| |+||.|+|+||+..+
T Consensus 114 ~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l 145 (147)
T 4ds7_A 114 GEKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145 (147)
T ss_dssp TCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHH
Confidence 4322 22235678899 999999999999875
No 99
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=99.81 E-value=1.9e-19 Score=162.54 Aligned_cols=131 Identities=20% Similarity=0.219 Sum_probs=101.3
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
.+.+||+++|++|||||||++++.++.+.. +.||.+... ..+.+++ ..+.+||++|++.++.++ ..+++.+|+
T Consensus 23 ~~~~ki~lvG~~~vGKSsLi~~l~~~~~~~-~~~t~~~~~--~~~~~~~--~~l~i~Dt~G~~~~~~~~--~~~~~~~d~ 95 (198)
T 1f6b_A 23 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTLHPTS--EELTIAG--MTFTTFDLGGHIQARRVW--KNYLPAING 95 (198)
T ss_dssp TCCEEEEEEEETTSSHHHHHHHHSCC-------CCCCCSC--EEEEETT--EEEEEEEECC----CCGG--GGGGGGCSE
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhcCCCCc-cCCCCCcee--EEEEECC--EEEEEEECCCcHhhHHHH--HHHHhcCCE
Confidence 345799999999999999999999988754 447776653 4566664 778899999999998887 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHH
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTF 423 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~ 423 (430)
+++|||++++++|..+..|+..+...... .++|+++|+||+|+.. .+..+++.+++..
T Consensus 96 ~i~v~D~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~NK~Dl~~-~~~~~~~~~~~~~ 153 (198)
T 1f6b_A 96 IVFLVDCADHERLLESKEELDSLMTDETI--ANVPILILGNKIDRPE-AISEERLREMFGL 153 (198)
T ss_dssp EEEEEETTCGGGHHHHHHHHHHHHTCGGG--TTSCEEEEEECTTSTT-CCCHHHHHHHHTC
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHhCccc--CCCcEEEEEECCCccc-cCCHHHHHHHhCc
Confidence 99999999999999999999998765322 2799999999999986 5667777777664
No 100
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.81 E-value=9.2e-20 Score=159.17 Aligned_cols=151 Identities=16% Similarity=0.287 Sum_probs=119.2
Q ss_pred hhhccccCCCCccccccCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhhhcCC
Q 014101 32 AQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNS-PLQPSEIVGVKRVVQEKLREG 110 (430)
Q Consensus 32 ~~~~~~~p~~~l~~~~~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~-~~~~~e~~~i~~~~~~~~~~d 110 (430)
.+++++-++++.+ ..|++++++.|+++|..||+|+||.|+.+||..++.. +|. .++.+++..++...
T Consensus 4 ~k~~~~~~~~~~~----~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~l~~~~------- 71 (166)
T 2mys_B 4 AKRRAAEGSSNVF----SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAA-MGRLNVKNEELDAMIKEA------- 71 (166)
T ss_pred hhhcccccCchhh----hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHC-------
Confidence 4556666665544 3689999999999999999999999999999999876 477 88999998888653
Q ss_pred ccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcC
Q 014101 111 VNERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDA 189 (430)
Q Consensus 111 ~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~ 189 (430)
+| |+|+||+.++...... ....+.++.+|+.||+
T Consensus 72 ---dg~i~~~eF~~~~~~~~~~------------------------------------------~~~~~~l~~~F~~~D~ 106 (166)
T 2mys_B 72 ---SGPINFTVFLTMFGEKLKG------------------------------------------ADPEDVIMGAFKVLDP 106 (166)
T ss_pred ---CCCcCHHHHHHHHHHHhcc------------------------------------------CCcHHHHHHHHHHhCC
Confidence 36 9999999986532210 0112458899999999
Q ss_pred CCCCCCCHHHHHHhhccCCCC--CCCCCcccccccccCCcccchhhHHhhhh
Q 014101 190 DDDNSLRPIEVEDLFSTAPEC--PWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 190 d~dG~is~~el~~~~~~~~~~--~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
|++|+|+.+||+.++...+.. +.....+++.+|.|+||.|+|+||+..+.
T Consensus 107 d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~ 158 (166)
T 2mys_B 107 DGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVIT 158 (166)
T ss_pred CCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHH
Confidence 999999999999999875321 12234577889999999999999998865
No 101
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=99.81 E-value=2.2e-19 Score=160.91 Aligned_cols=129 Identities=19% Similarity=0.203 Sum_probs=105.2
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
+.+||+++|++|||||||++++.++.+.. +.||.+.. ...+.+++ ..+.+||++|++.+..++ ..+++.+|++
T Consensus 22 ~~~ki~~vG~~~vGKSsli~~l~~~~~~~-~~~t~~~~--~~~~~~~~--~~~~i~Dt~G~~~~~~~~--~~~~~~~d~~ 94 (190)
T 1m2o_B 22 KHGKLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTWHPT--SEELAIGN--IKFTTFDLGGHIQARRLW--KDYFPEVNGI 94 (190)
T ss_dssp --CEEEEEESTTSSHHHHHHHHHHSCCCC-CCCCCSCE--EEEEEETT--EEEEEEECCCSGGGTTSG--GGGCTTCCEE
T ss_pred CccEEEEECCCCCCHHHHHHHHhcCCCCc-cccCCCCC--eEEEEECC--EEEEEEECCCCHHHHHHH--HHHHhcCCEE
Confidence 34699999999999999999999988764 44677664 35666664 778899999999988877 6888999999
Q ss_pred EEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHH
Q 014101 364 VFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFT 422 (430)
Q Consensus 364 ilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~ 422 (430)
++|||+++++||+.+..|+..+...... .++|+++|+||+|+.+ .+..+++.+++.
T Consensus 95 i~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~NK~Dl~~-~~~~~~~~~~~~ 150 (190)
T 1m2o_B 95 VFLVDAADPERFDEARVELDALFNIAEL--KDVPFVILGNKIDAPN-AVSEAELRSALG 150 (190)
T ss_dssp EEEEETTCGGGHHHHHHHHHHHHTCGGG--TTCCEEEEEECTTSTT-CCCHHHHHHHTT
T ss_pred EEEEECCChHHHHHHHHHHHHHHcchhh--cCCCEEEEEECCCCcC-CCCHHHHHHHhC
Confidence 9999999999999999999998764322 2789999999999987 556666666544
No 102
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=99.81 E-value=4.1e-19 Score=157.98 Aligned_cols=119 Identities=19% Similarity=0.259 Sum_probs=99.6
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
++.+||+++|++|||||||+++++++. ...+.||.+.. ...+.++ ...+.+||++|++.+...+ ..+++++|+
T Consensus 16 ~~~~~i~v~G~~~~GKssl~~~l~~~~-~~~~~~t~~~~--~~~~~~~--~~~~~~~Dt~G~~~~~~~~--~~~~~~~d~ 88 (186)
T 1ksh_A 16 ERELRLLMLGLDNAGKTTILKKFNGED-VDTISPTLGFN--IKTLEHR--GFKLNIWDVGGQKSLRSYW--RNYFESTDG 88 (186)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHTTCC-CSSCCCCSSEE--EEEEEET--TEEEEEEEECCSHHHHTTG--GGGCTTCSE
T ss_pred CCeeEEEEECCCCCCHHHHHHHHhcCC-CCcccccCccc--eEEEEEC--CEEEEEEECCCCHhHHHHH--HHHhcCCCE
Confidence 456899999999999999999999988 55556777743 3455555 4778899999999999887 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+++|||++++.||..+..|+..+...... .++|+++|+||+|+.+.
T Consensus 89 ii~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~nK~Dl~~~ 134 (186)
T 1ksh_A 89 LIWVVDSADRQRMQDCQRELQSLLVEERL--AGATLLIFANKQDLPGA 134 (186)
T ss_dssp EEEEEETTCGGGHHHHHHHHHHHHTCGGG--TTCEEEEEEECTTSTTC
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHhChhc--CCCcEEEEEeCccCCCC
Confidence 99999999999999999999988765321 26899999999999874
No 103
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=99.81 E-value=1.5e-19 Score=160.39 Aligned_cols=122 Identities=16% Similarity=0.184 Sum_probs=98.8
Q ss_pred hccCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccc
Q 014101 280 QAERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAA 359 (430)
Q Consensus 280 ~~~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ 359 (430)
......+||+|+|.+|||||||+++|+++.+ ..+.+|.+... ..+.+.+ ..+.+||++|.+.+..++ ..++++
T Consensus 16 ~~~~~~~~i~v~G~~~~GKSsli~~l~~~~~-~~~~~t~~~~~--~~~~~~~--~~~~i~Dt~G~~~~~~~~--~~~~~~ 88 (181)
T 2h17_A 16 PRGSQEHKVIIVGLDNAGKTTILYQFSMNEV-VHTSPTIGSNV--EEIVINN--TRFLMWDIGGQESLRSSW--NTYYTN 88 (181)
T ss_dssp -----CEEEEEEEETTSSHHHHHHHHHTTSC-EEEECCSSSSC--EEEEETT--EEEEEEEESSSGGGTCGG--GGGGTT
T ss_pred CCCCceeEEEEECCCCCCHHHHHHHHhcCCC-CccCCcCceee--EEEEECC--EEEEEEECCCCHhHHHHH--HHHhcc
Confidence 3445678999999999999999999999988 44457777554 4455553 778899999999998887 788999
Q ss_pred ccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 360 CDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 360 ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+|++++|||++++++|..+..|+..+...... .++|+++|+||+|+.+.
T Consensus 89 ~d~ii~v~D~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~NK~Dl~~~ 137 (181)
T 2h17_A 89 TEFVIVVVDSTDRERISVTREELYKMLAHEDL--RKAGLLIFANKQDVKEC 137 (181)
T ss_dssp CCEEEEEEETTCTTTHHHHHHHHHHHHTCGGG--TTCEEEEEEECTTSTTC
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHHHhChhh--CCCeEEEEEECCCcccC
Confidence 99999999999999999999999988764211 27899999999999773
No 104
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=99.81 E-value=3e-19 Score=156.12 Aligned_cols=119 Identities=18% Similarity=0.167 Sum_probs=99.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
+..+||+++|++|||||||++++.++.+.. +.||.+.. ...+.+. ...+.+||++|.+.+..++ ..+++.+|+
T Consensus 5 ~~~~~i~v~G~~~~GKssl~~~l~~~~~~~-~~~t~~~~--~~~~~~~--~~~~~~~Dt~G~~~~~~~~--~~~~~~~d~ 77 (171)
T 1upt_A 5 TREMRILILGLDGAGKTTILYRLQVGEVVT-TIPTIGFN--VETVTYK--NLKFQVWDLGGLTSIRPYW--RCYYSNTDA 77 (171)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHSSCCC-CCCCSSEE--EEEEEET--TEEEEEEEECCCGGGGGGG--GGGCTTCSE
T ss_pred CCccEEEEECCCCCCHHHHHHHHhcCCCCC-cCCcCccc--eEEEEEC--CEEEEEEECCCChhhhHHH--HHHhccCCE
Confidence 456899999999999999999999888754 44676643 3455555 4678899999999988887 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+++|||++++.+|..+..|+..+...... .++|+++|+||+|+.+.
T Consensus 78 ii~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~nK~Dl~~~ 123 (171)
T 1upt_A 78 VIYVVDSCDRDRIGISKSELVAMLEEEEL--RKAILVVFANKQDMEQA 123 (171)
T ss_dssp EEEEEETTCCTTHHHHHHHHHHHHTCGGG--TTCEEEEEEECTTSTTC
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHhchhh--CCCEEEEEEECCCCcCC
Confidence 99999999999999999999888765321 27899999999999874
No 105
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.81 E-value=6.1e-20 Score=164.74 Aligned_cols=146 Identities=18% Similarity=0.223 Sum_probs=113.8
Q ss_pred ccCCCCccccccCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-
Q 014101 37 LHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG- 115 (430)
Q Consensus 37 ~~p~~~l~~~~~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g- 115 (430)
..|.++.+.+...++++ .+.|+++|+.+|+|+||.|+.+||..++ ...|.+++++++..+++.+ |.+++|
T Consensus 9 ~~~~~~~~~~~~~~~~~--~~~l~~~F~~~D~d~~G~I~~~El~~~l-~~~~~~~~~~~~~~l~~~~------D~d~dG~ 79 (191)
T 1y1x_A 9 MPTSTGVYAPSARHMND--NQELMEWFRAVDTDGSGAISVPELNAAL-SSAGVPFSLATTEKLLHMY------DKNHSGE 79 (191)
T ss_dssp -CCSCCTTSTTCCSSCT--TSCHHHHHHHHCTTCSSSBCHHHHHHHH-CBTTBCCCHHHHHHHHHHH------CTTCSSS
T ss_pred CCCcccccCCcccccCC--HHHHHHHHHHHcCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHh------CCCCCCe
Confidence 46777888888888876 5789999999999999999999999997 4467889999999999998 678888
Q ss_pred cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCC
Q 014101 116 LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSL 195 (430)
Q Consensus 116 i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~i 195 (430)
|+|+||+.++.. .+.++++|+.||+|++|.|
T Consensus 80 I~~~EF~~~~~~-------------------------------------------------~~~~~~~F~~~D~d~~G~i 110 (191)
T 1y1x_A 80 ITFDEFKDLHHF-------------------------------------------------ILSMREGFRKRDSSGDGRL 110 (191)
T ss_dssp BCHHHHHHHHHH-------------------------------------------------HHHHHHHHHHHCTTSSSCB
T ss_pred EcHHHHHHHHHH-------------------------------------------------HHHHHHHHHHhCCCCCCeE
Confidence 999999988642 1236678888888888888
Q ss_pred CHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 196 RPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 196 s~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
+.+||+.++...+... .....+++.+|.|+||.|+|+||+..+..
T Consensus 111 ~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 157 (191)
T 1y1x_A 111 DSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF 157 (191)
T ss_dssp CHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 8888888777643211 12234566778888888888888877653
No 106
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.81 E-value=4e-20 Score=159.89 Aligned_cols=147 Identities=15% Similarity=0.233 Sum_probs=117.2
Q ss_pred cCCccHHHHHHHHHHHHhhc-CCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCD-HDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D-~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
...|++++++.++++|..+| +|+||.|+.+||..++.. +|..++.+++..+++.+ |.+++| |+|+||+.++
T Consensus 4 ~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~------D~~~~g~i~~~eF~~~~ 76 (158)
T 2jnf_A 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEV-LGIQQTKSTIRQLIDEF------DPFGNGDIDFDSFKIIG 76 (158)
T ss_dssp STTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHH-TTCSCSHHHHHHHHHHH------CTTCCSEECHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CCCCCCcCcHHHHHHHH
Confidence 35689999999999999999 999999999999999776 58889999999999998 677888 9999999986
Q ss_pred HHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 126 ALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 126 ~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
....... ..+. .....++.+|+.||+|++|.|+.+||+.++.
T Consensus 77 ~~~~~~~-------------------------------~~~~-------~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~ 118 (158)
T 2jnf_A 77 ARFLGEE-------------------------------VNPE-------QMQQELREAFRLYDKEGNGYISTDVMREILA 118 (158)
T ss_dssp HHHCCCC-------------------------------CCTT-------TTSSTHHHHHHHHCSSSSSSEEHHHHHHHHH
T ss_pred HHHhccc-------------------------------cchh-------hHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 5321000 0000 0112378999999999999999999999998
Q ss_pred cCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 206 TAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 206 ~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
..+... .....+++.+|.|+||.|+|+||+..+.
T Consensus 119 ~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 154 (158)
T 2jnf_A 119 ELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154 (158)
T ss_dssp HHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTS
T ss_pred HhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 654322 2234577889999999999999998753
No 107
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=99.80 E-value=2.3e-19 Score=155.89 Aligned_cols=116 Identities=22% Similarity=0.229 Sum_probs=96.7
Q ss_pred eEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEEE
Q 014101 286 FQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVF 365 (430)
Q Consensus 286 ~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vil 365 (430)
+||+++|++|||||||+++++++.+.. +.||.+.. ...+... ...+.+||++|++.+..++ ..+++++|++++
T Consensus 1 ~ki~~~G~~~~GKssl~~~l~~~~~~~-~~~t~~~~--~~~~~~~--~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~~i~ 73 (164)
T 1r8s_A 1 MRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFN--VETVEYK--NISFTVWDVGGQDKIRPLW--RHYFQNTQGLIF 73 (164)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHCSSC-CCCCSSCC--EEEEECS--SCEEEEEECCCCGGGHHHH--HHHTTTCSEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHcCCcCc-ccCcCcee--EEEEEEC--CEEEEEEEcCCChhhHHHH--HHHhccCCEEEE
Confidence 589999999999999999999888764 44777643 3455554 4678899999999998887 678999999999
Q ss_pred EEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 366 VHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 366 v~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
|||+++++||..+..|+..+...... .++|+++|+||+|+.+.
T Consensus 74 v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~nK~Dl~~~ 116 (164)
T 1r8s_A 74 VVDSNDRERVNEAREELMRMLAEDEL--RDAVLLVFANKQDLPNA 116 (164)
T ss_dssp EEETTCGGGHHHHHHHHHHHHTCGGG--TTCEEEEEEECTTSTTC
T ss_pred EEECCCHHHHHHHHHHHHHHHhchhh--cCCeEEEEEECcCCcCC
Confidence 99999999999999999988764322 26899999999999774
No 108
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.80 E-value=1e-19 Score=160.77 Aligned_cols=143 Identities=17% Similarity=0.296 Sum_probs=115.5
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..|++++++.++++|..+|+|+||.|+.+||..++.. +|.+++.+++..+++.+ |.+++| |+|+||+.++..
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~------D~~~~g~i~~~EF~~~~~~ 75 (179)
T 2f2o_A 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEV------DADGNGTIDFPEFLTMMAR 75 (179)
T ss_dssp ---CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-TTCCCCHHHHHHHHHHH------CTTCSSSBCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHh------ccCCCCCCcHHHHHHHHHH
Confidence 3578899999999999999999999999999999775 68889999999999998 678888 999999998653
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
.... ....+.++.+|+.||+|++|.|+.+||+.++...
T Consensus 76 ~~~~------------------------------------------~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~ 113 (179)
T 2f2o_A 76 KMKD------------------------------------------TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 113 (179)
T ss_dssp HHHH------------------------------------------HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HccC------------------------------------------cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 2210 1123458899999999999999999999999875
Q ss_pred CCCC--CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 208 PECP--WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 208 ~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
+... .....+++.+|.|+||.|+|+||+..+.-
T Consensus 114 g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 148 (179)
T 2f2o_A 114 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148 (179)
T ss_dssp --CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 4321 12245678899999999999999998653
No 109
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.80 E-value=1.4e-19 Score=161.72 Aligned_cols=152 Identities=15% Similarity=0.160 Sum_probs=118.9
Q ss_pred cCCccHHHHHHHHHHHHhh-cCCCCCccCHHHHHHHHHHhc---CCCCCHHHHHHHH-----------HHHHhhhcCCcc
Q 014101 48 SQALKPRCVRALKRIFILC-DHDRDGALSDAELNDFQVKCF---NSPLQPSEIVGVK-----------RVVQEKLREGVN 112 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~-D~d~dG~is~~El~~~~~~~~---g~~~~~~e~~~i~-----------~~~~~~~~~d~~ 112 (430)
...+++.+++.++++|+.+ |+|+||.|+.+||..++..+. |.+++.+++..++ +.+ |.+
T Consensus 3 ~~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~------D~d 76 (191)
T 2ccm_A 3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYA------DEN 76 (191)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHH------CTT
T ss_pred hhhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc------CCC
Confidence 4568999999999999999 999999999999999987653 8888999999888 555 778
Q ss_pred CCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCC
Q 014101 113 ERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADD 191 (430)
Q Consensus 113 ~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~ 191 (430)
++| |+++||+.++....... ..+ ..........++.+|+.||+||
T Consensus 77 ~dG~i~~~Ef~~~~~~~~~~~------------------------------~~~----~~~~~~~~~~~~~~F~~~D~d~ 122 (191)
T 2ccm_A 77 EDEQVTKEEWLKMWAECVKSV------------------------------EKG----ESLPEWLTKYMNFMFDVNDTSG 122 (191)
T ss_dssp CSSCEEHHHHHHHHHHHHHHH------------------------------HTT----CCCCHHHHHHHHHHHHHHCTTC
T ss_pred CCCeECHHHHHHHHHHHhccc------------------------------cch----hhchHHHHHHHHHHHHHhCCCC
Confidence 888 99999999875422100 000 0011233456889999999999
Q ss_pred CCCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 192 DNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 192 dG~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
||.|+.+||..++...+..+.....+++.+|.|+||.|+++||+..+.
T Consensus 123 dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 170 (191)
T 2ccm_A 123 DNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFARLWT 170 (191)
T ss_dssp SSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTTTTSCCBHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence 999999999999987652222234577889999999999999998854
No 110
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.80 E-value=3.8e-20 Score=157.25 Aligned_cols=136 Identities=15% Similarity=0.264 Sum_probs=109.5
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHH
Q 014101 51 LKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFI 129 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~ 129 (430)
||+++++.|+++|+.||+|+||.|+.+||..++.. +|..++.+++..++.. ++| |+|+||+.++....
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~----------~~g~i~~~eF~~~~~~~~ 69 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS-MGKNPTDEYLEGMMSE----------APGPINFTMFLTMFGEKL 69 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHH-TSCCCCHHHHHTTTTT----------SSSCCCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH-hCCCCCHHHHHHHHHh----------CCCCcCHHHHHHHHHHHh
Confidence 68899999999999999999999999999999776 5888899888777643 456 99999999865211
Q ss_pred HcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCC
Q 014101 130 EKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPE 209 (430)
Q Consensus 130 ~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~ 209 (430)
. . ....+.++.+|+.||+|++|+|+.+||+.++...+.
T Consensus 70 ~---------------------------------~---------~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~ 107 (143)
T 3j04_B 70 N---------------------------------G---------TDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGD 107 (143)
T ss_dssp T---------------------------------S---------SCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSS
T ss_pred c---------------------------------c---------CCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCC
Confidence 0 0 011245889999999999999999999999987543
Q ss_pred CC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 210 CP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 210 ~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.. .....+++.+|.|+||.|+|+||+..+.
T Consensus 108 ~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 139 (143)
T 3j04_B 108 RFTDEEVDEMYREAPIDKKGNFNYVEFTRILK 139 (143)
T ss_dssp CCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence 22 2234577889999999999999998754
No 111
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.80 E-value=8.4e-20 Score=160.47 Aligned_cols=147 Identities=21% Similarity=0.256 Sum_probs=113.5
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCccCHHHHHHH---HHHhcCCCCCHHHHH-----------HHHHHHHhhhcCCccCCC-
Q 014101 51 LKPRCVRALKRIFILCDHDRDGALSDAELNDF---QVKCFNSPLQPSEIV-----------GVKRVVQEKLREGVNERG- 115 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~---~~~~~g~~~~~~e~~-----------~i~~~~~~~~~~d~~~~g- 115 (430)
||+++++.++++|+.||+|+||.|+.+||..+ +.+.+|.+++.+++. .+++.+ |.+++|
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~------D~d~dg~ 74 (176)
T 1nya_A 1 TTAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEA------GVGSDGS 74 (176)
T ss_dssp CCSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHH------TSCTTCC
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCCe
Confidence 57889999999999999999999999999984 234579999999988 455555 677888
Q ss_pred cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCC
Q 014101 116 LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSL 195 (430)
Q Consensus 116 i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~i 195 (430)
|+++||+.++.......... .......+.++.+|+.||.|++|.|
T Consensus 75 i~~~Ef~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~F~~~D~d~~G~I 119 (176)
T 1nya_A 75 LTEEQFIRVTENLIFEQGEA-----------------------------------SFNRVLGPVVKGIVGMCDKNADGQI 119 (176)
T ss_dssp BCHHHHHHHHHHHHSSSCHH-----------------------------------HHHHHHHHHHHHHHHHTCSSCCSEE
T ss_pred EcHHHHHHHHHHHhcCCchh-----------------------------------hHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999876432110000 0001123558899999999999999
Q ss_pred CHHHHHHhhccCCCCC-CCCCcccccccccCCcccchhhHHhhhh
Q 014101 196 RPIEVEDLFSTAPECP-WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 196 s~~el~~~~~~~~~~~-~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+.+||+.++...+ .+ .....+++.+|.|+||.|+|+||+..+.
T Consensus 120 ~~~e~~~~l~~~g-~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~ 163 (176)
T 1nya_A 120 NADEFAAWLTALG-MSKAEAAEAFNQVDTNGNGELSLDELLTAVR 163 (176)
T ss_dssp EHHHHHHHHHHTT-CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHS
T ss_pred CHHHHHHHHHHhC-CCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 9999999998765 22 2234567889999999999999998864
No 112
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.80 E-value=7.9e-20 Score=164.13 Aligned_cols=139 Identities=17% Similarity=0.198 Sum_probs=112.7
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..|++++++.|+++|+.+|+|+||.|+.+||..++.. +|..++ +++..+++.+ |.+++| |+|+||+.++..
T Consensus 44 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~g~~~~-~~~~~l~~~~------D~d~~g~i~~~EF~~~~~~ 115 (191)
T 3k21_A 44 QQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK-DGLKLP-YNFDLLLDQI------DSDGSGKIDYTEFIAAALD 115 (191)
T ss_dssp HHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCC-TTHHHHHHHH------CTTCSSSEEHHHHHHHHSC
T ss_pred HHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-cCCCcH-HHHHHHHHHh------CCCCCCeEeHHHHHHHHHh
Confidence 4578899999999999999999999999999999776 477777 8899999998 678888 999999987420
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
.. ....+.++.+|+.||+||||+|+.+||+.++...
T Consensus 116 ----------------------------------~~----------~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 151 (191)
T 3k21_A 116 ----------------------------------RK----------QLSKKLIYCAFRVFDVDNDGEITTAELAHILYNG 151 (191)
T ss_dssp ----------------------------------GG----------GCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHS
T ss_pred ----------------------------------hh----------hccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 00 0113458899999999999999999999999763
Q ss_pred C-CCCCC------CCcccccccccCCcccchhhHHhhhh
Q 014101 208 P-ECPWD------EAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 208 ~-~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
. +.+.. ...+++.+|.|+||.|+|+||+..+.
T Consensus 152 ~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 152 NKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp SSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred CCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 1 11211 23567899999999999999998754
No 113
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=99.80 E-value=2.1e-19 Score=160.22 Aligned_cols=128 Identities=16% Similarity=0.218 Sum_probs=99.8
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
+..+||+++|.+|||||||+++++++.+. .+.||.+... ..+.++ ...+.+||++|.+.+..++ ..+++++|+
T Consensus 14 ~~~~~i~v~G~~~~GKssl~~~l~~~~~~-~~~~t~~~~~--~~~~~~--~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 86 (187)
T 1zj6_A 14 HQEHKVIIVGLDNAGKTTILYQFSMNEVV-HTSPTIGSNV--EEIVIN--NTRFLMWDIGGQESLRSSW--NTYYTNTEF 86 (187)
T ss_dssp TSCEEEEEEESTTSSHHHHHHHHHTTSCE-EEECCSCSSC--EEEEET--TEEEEEEECCC----CGGG--HHHHTTCCE
T ss_pred CCccEEEEECCCCCCHHHHHHHHhcCCCC-cCcCCCccce--EEEEEC--CEEEEEEECCCCHhHHHHH--HHHhcCCCE
Confidence 45689999999999999999999988887 5557777543 445555 3778899999999988887 678899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHH
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRV 420 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~ 420 (430)
+++|||+++++||..+..|+..+...... .++|+++|+||+|+.+. ...+++.+.
T Consensus 87 ii~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~NK~Dl~~~-~~~~~i~~~ 141 (187)
T 1zj6_A 87 VIVVVDSTDRERISVTREELYKMLAHEDL--RKAGLLIFANKQDVKEC-MTVAEISQF 141 (187)
T ss_dssp EEEEEETTCTTTHHHHHHHHHHHHTSGGG--TTCEEEEEEECTTSTTC-CCHHHHHHH
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHhchhh--CCCeEEEEEECCCCcCC-CCHHHHHHH
Confidence 99999999999999999999998875321 26899999999999863 334444443
No 114
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.80 E-value=2.3e-19 Score=155.49 Aligned_cols=145 Identities=19% Similarity=0.280 Sum_probs=118.0
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..|++++++.++++|..+|+|+||.|+.+||..++.. +|.+++.+++..+++.+ |.+++| |+|+||+.++..
T Consensus 12 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~------d~~~~g~i~~~ef~~~~~~ 84 (162)
T 1top_A 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRM-LGQNPTKEELDAIIEEV------DEDGSGTIDFEEFLVMMVR 84 (162)
T ss_dssp HHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHHH------CTTSCCEEEHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHH------cCCCCCcEeHHHHHHHHHH
Confidence 3589999999999999999999999999999999775 58889999999999998 677888 999999998653
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
...... .....+.++.+|+.||.|++|.|+.+||+.++...
T Consensus 85 ~~~~~~---------------------------------------~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~ 125 (162)
T 1top_A 85 QMKEDA---------------------------------------KGKSEEELANCFRIFDKNADGFIDIEELGEILRAT 125 (162)
T ss_dssp HHHHHH---------------------------------------HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTT
T ss_pred Hhcccc---------------------------------------ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh
Confidence 321000 00133558899999999999999999999999875
Q ss_pred CCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 208 PECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 208 ~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+... .....+++.+|.|+||.|+|+||+..+.
T Consensus 126 g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 159 (162)
T 1top_A 126 GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159 (162)
T ss_dssp TCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 4221 2234567889999999999999998754
No 115
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.80 E-value=7.5e-20 Score=166.09 Aligned_cols=153 Identities=14% Similarity=0.181 Sum_probs=109.7
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCC--CCCHHHHHHHH-------HHHHhhhcCCccCCC-cCH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNS--PLQPSEIVGVK-------RVVQEKLREGVNERG-LTL 118 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~--~~~~~e~~~i~-------~~~~~~~~~d~~~~g-i~~ 118 (430)
..|++++++.|+++|..+|+|+||.|+.+||..++..+ |. .++++++..++ +.+ |.+++| |+|
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~-~~~~~~~~~~~~~l~~~~~~lf~~~------D~d~dg~i~~ 100 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRM-RQLVNATDEQVEKMRDAVRVFFLHK------GVEPVNGLLR 100 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHHH-HHHSCCCHHHHHHHHHHHHHHHHHT------TCBTTTBEEG
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-HhhcCCCHHHHHHHHHHHHHHHHHh------CCCCCCeEcH
Confidence 67899999999999999999999999999999998764 55 78899999998 666 678889 999
Q ss_pred HhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHH
Q 014101 119 AGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPI 198 (430)
Q Consensus 119 ~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~ 198 (430)
+||+.++...-. +...+.+. .. .....+.++.+|+.||+||||.|+.+
T Consensus 101 ~EF~~~~~~~~~-------~~~~~~~~--------------------~~-----~~~~~~~~~~~F~~~D~d~~G~Is~~ 148 (208)
T 2hpk_A 101 EDWVEANRVFAE-------AERERERR--------------------GE-----PSLIALLSNSYYDVLDDDGDGTVDVD 148 (208)
T ss_dssp GGHHHHHHHHHH-------HHHHHHHT--------------------TC-----CCHHHHHHHHHHHHHCTTCSSSBCHH
T ss_pred HHHHHHHHHHhh-------hhhhhhcc--------------------CC-----hHHHHHHHHHHHHHhCCCCCCcCCHH
Confidence 999998641000 00000000 00 00112237889999999999999999
Q ss_pred HHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhhh
Q 014101 199 EVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 199 el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
||+.++...+..+.....+++.+|.|+||.|+|+||+..+.-
T Consensus 149 El~~~l~~~g~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 190 (208)
T 2hpk_A 149 ELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELVHLFRK 190 (208)
T ss_dssp HHHHHHHHTTSCTTHHHHHHHHHCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 999999876622233356778999999999999999998653
No 116
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.80 E-value=2.9e-19 Score=158.14 Aligned_cols=149 Identities=13% Similarity=0.162 Sum_probs=116.0
Q ss_pred ccHHHHHHHHHHHHhh-cCCCCCccCHHHHHHHHHHhc---CCCCCHHHHHHH-----------HHHHHhhhcCCccCCC
Q 014101 51 LKPRCVRALKRIFILC-DHDRDGALSDAELNDFQVKCF---NSPLQPSEIVGV-----------KRVVQEKLREGVNERG 115 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~-D~d~dG~is~~El~~~~~~~~---g~~~~~~e~~~i-----------~~~~~~~~~~d~~~~g 115 (430)
||+++++.++++|+.| |+|+||.|+.+||..++..+. |.+++.+++..+ ++.+ |.+++|
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~------D~d~dG 75 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRA------DINKDD 75 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHH------CTTCSS
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhc------CCCCCC
Confidence 6889999999999999 999999999999999977643 267888888866 5555 678888
Q ss_pred -cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCC
Q 014101 116 -LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNS 194 (430)
Q Consensus 116 -i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~ 194 (430)
|+++||+.++......... . ........+.++.+|+.||+|+||.
T Consensus 76 ~I~~~Ef~~~~~~~~~~~~~-------------------~---------------~~~~~~~~~~~~~~F~~~D~d~dG~ 121 (185)
T 2sas_A 76 VVSWEEYLAMWEKTIATCKS-------------------V---------------ADLPAWCQNRIPFLFKGMDVSGDGI 121 (185)
T ss_dssp CEEHHHHHHHHHHHHHTCCS-------------------G---------------GGSCTTHHHHHHHHHHHHCTTSSSC
T ss_pred eEcHHHHHHHHHHHhccccc-------------------h---------------hhhhHHHHHHHHHHHHHHcCCCCCe
Confidence 9999999987643321000 0 0001123356889999999999999
Q ss_pred CCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 195 LRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 195 is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
|+.+||..++...+........+++.+|.|+||.|+++||+..+.
T Consensus 122 Is~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~ 166 (185)
T 2sas_A 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY 166 (185)
T ss_dssp CCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHHHHHHHH
T ss_pred EcHHHHHHHHHHhCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 999999999987653333445677899999999999999998854
No 117
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=99.79 E-value=5.1e-19 Score=158.79 Aligned_cols=142 Identities=18% Similarity=0.227 Sum_probs=121.8
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...++|+++|++|||||||++++.+..+...+.||++.++....+.+++......+||++|.+.+..++ ..+++.+++
T Consensus 27 ~~~~kv~lvG~~g~GKSTLl~~l~~~~~~~~~~~t~~~~~~~~~i~~~g~~~~~~i~Dt~g~~~~~~~~--~~~~~~~~~ 104 (191)
T 1oix_A 27 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRAIT--SAYYRGAVG 104 (191)
T ss_dssp SEEEEEEEEECTTSSHHHHHHHHHHSCCCCSCCCCCSEEEEEEEEEETTEEEEEEEEEECSCCSSSCCC--HHHHTTCCE
T ss_pred CcceEEEEECcCCCCHHHHHHHHhcCCCCCCCCCccceEEEEEEEEECCEEEEEEEEECCCCcchhhhh--HHHhhcCCE
Confidence 456899999999999999999999999888888999998888888888666677889999998877766 567788999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
+++|||+++..+|+.+..|+..+..... .+.|+++|+||+|+.+. .+...++.+++.+.++.++
T Consensus 105 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~---~~~~i~~v~nK~Dl~~~~~~~~~~a~~l~~~~~~~~l 169 (191)
T 1oix_A 105 ALLVYDIAKHLTYENVERWLKELRDHAD---SNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFI 169 (191)
T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHSC---TTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHHhcC---CCCcEEEEEECcccccccccCHHHHHHHHHHcCCEEE
Confidence 9999999999999999889887765432 26899999999999874 4667889999999888764
No 118
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.79 E-value=4e-19 Score=151.58 Aligned_cols=144 Identities=14% Similarity=0.221 Sum_probs=113.9
Q ss_pred CccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALF 128 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~ 128 (430)
.||++++++++++|..+|+|+||.|+.+||..++.. +|..++.+++..+++.+.. .|.++ | |+|+||+.++...
T Consensus 1 ~l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~~~---~d~~~-g~i~~~eF~~~~~~~ 75 (149)
T 2mys_C 1 EFSKAAADDFKEAFLLFDRTGDAKITASQVGDIARA-LGQNPTNAEINKILGNPSK---EEMNA-AAITFEEFLPMLQAA 75 (149)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhhh---ccccC-CcCcHHHHHHHHHHH
Confidence 478999999999999999999999999999999776 5888999999999988821 13556 7 9999999986532
Q ss_pred HHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC
Q 014101 129 IEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP 208 (430)
Q Consensus 129 ~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~ 208 (430)
.. . ......+.++.+|+.||+|++|.|+.+||+.++...+
T Consensus 76 ~~--------------------------~--------------~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g 115 (149)
T 2mys_C 76 AN--------------------------N--------------KDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLG 115 (149)
T ss_pred hc--------------------------c--------------CCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhC
Confidence 10 0 0011234588999999999999999999999998754
Q ss_pred CCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 209 ECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 209 ~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
... .....+++. |.|+||.|+|+||+..+.
T Consensus 116 ~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~ 147 (149)
T 2mys_C 116 EKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM 147 (149)
T ss_pred CCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHh
Confidence 322 223456677 999999999999998753
No 119
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.79 E-value=3.8e-20 Score=160.47 Aligned_cols=144 Identities=14% Similarity=0.167 Sum_probs=115.1
Q ss_pred CccHHHHHHHHHHHHhhc--CCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCD--HDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D--~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
+|++++++.|+++|..|| +|+||.|+.+||..+++. +|..++.+++..++..+ |.+ +| |+|+||+.++.
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~l~~~~------d~~-~g~i~~~eF~~~~~ 73 (159)
T 2ovk_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRC-LGMNPTEAQVHQHGGTK------KMG-EKAYKLEEILPIYE 73 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSEEEGGGHHHHHHH-TTCCCCHHHHHHTTCCS------STT-SCEEEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHH-cCCCCCHHHHHHHHHHh------cCC-CCeEcHHHHHHHHH
Confidence 689999999999999999 999999999999999775 58889999999988887 333 47 99999998864
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
.... . . .....+.++.+|+.||+||+|+|+.+||+.++..
T Consensus 74 ~~~~--------------------------~-----~---------~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~ 113 (159)
T 2ovk_C 74 EMSS--------------------------K-----D---------TGTAADEFMEAFKTFDREGQGLISSAEIRNVLKM 113 (159)
T ss_dssp HHTT--------------------------C-----S---------TTCCHHHHHHHHHHTCTTSSSEECHHHHHHHHHH
T ss_pred HHhh--------------------------c-----c---------CCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 2110 0 0 0012345889999999999999999999999987
Q ss_pred CCCCC--CCCCcccc--cccccCCcccchhhHHhhhhhh
Q 014101 207 APECP--WDEAPYKD--AAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 207 ~~~~~--~~~~~~~~--~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
.+... .....+++ .+|.|+||.|+|+||+..+.-.
T Consensus 114 ~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 152 (159)
T 2ovk_C 114 LGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp SSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHHHC
T ss_pred hCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHhcC
Confidence 54322 22345778 8899999999999999886544
No 120
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.79 E-value=3e-19 Score=155.63 Aligned_cols=141 Identities=19% Similarity=0.266 Sum_probs=113.3
Q ss_pred CccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALF 128 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~ 128 (430)
.|++++++.++++|..+|.|+||.|+.+||..++.. +|.+++++++..+++.+ |.+++| |+|+||+.++...
T Consensus 20 ~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~------d~~~~g~i~~~ef~~~~~~~ 92 (166)
T 2aao_A 20 SLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKR-VGANLKESEILDLMQAA------DVDNSGTIDYKEFIAATLHL 92 (166)
T ss_dssp HSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGG-GTCCCCHHHHHHHHHHH------CTTCCSSBCHHHHHHHHTTC
T ss_pred hCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CCCCCCeEcHHHHHHHHHHH
Confidence 478999999999999999999999999999999765 58889999999999998 677888 9999999875310
Q ss_pred HHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC
Q 014101 129 IEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP 208 (430)
Q Consensus 129 ~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~ 208 (430)
. .....+.++.+|+.||.|++|.|+.+||+.++...+
T Consensus 93 ~-------------------------------------------~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~ 129 (166)
T 2aao_A 93 N-------------------------------------------KIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG 129 (166)
T ss_dssp H-------------------------------------------HHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC--
T ss_pred h-------------------------------------------hcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 0 001123478999999999999999999999998765
Q ss_pred CCCCCCCcccccccccCCcccchhhHHhhhhh
Q 014101 209 ECPWDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 209 ~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
..+.....+++.+|.|+||.|+|+||+..+.-
T Consensus 130 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 161 (166)
T 2aao_A 130 VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQK 161 (166)
T ss_dssp ------CCHHHHHCTTCSSSBCHHHHHHHHC-
T ss_pred CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 43344566788999999999999999998654
No 121
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.79 E-value=9.3e-20 Score=167.58 Aligned_cols=138 Identities=14% Similarity=0.166 Sum_probs=114.1
Q ss_pred ccCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 47 ESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 47 ~~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
-...|++++++.|+++|+.+|+|+||.|+.+||..++.. +|.+++++++..+++.+ |.+++| |+|+||+.++
T Consensus 41 ~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~~~~~l~~~~------D~d~dg~I~~~EF~~~~ 113 (220)
T 3sjs_A 41 LLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFP-GGIRLSPQTALRMMRIF------DTDFNGHISFYEFMAMY 113 (220)
T ss_dssp GGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBG-GGBCCCHHHHHHHHHHH------CTTCSSCBCHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHh------CCCCCCcCCHHHHHHHH
Confidence 345799999999999999999999999999999998765 48889999999999999 678888 9999999986
Q ss_pred HHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 126 ALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 126 ~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
.. .+.++.+|+.||+||+|+|+.+||+.++.
T Consensus 114 ~~-------------------------------------------------~~~l~~~F~~~D~d~~G~I~~~El~~~l~ 144 (220)
T 3sjs_A 114 KF-------------------------------------------------MELAYNLFVMNARARSGTLEPHEILPALQ 144 (220)
T ss_dssp HH-------------------------------------------------HHHHHHHHHHHCCSSTTEECHHHHHHHHH
T ss_pred HH-------------------------------------------------HHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence 42 13478899999999999999999999998
Q ss_pred cCCCCC--CCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 206 TAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 206 ~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
..+... .....+++.+| |+||.|+|+||+..+...
T Consensus 145 ~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l 181 (220)
T 3sjs_A 145 QLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAICAFA 181 (220)
T ss_dssp HHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHHHHH
T ss_pred HhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH
Confidence 643321 22345778899 999999999999887654
No 122
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=99.79 E-value=6.6e-19 Score=156.53 Aligned_cols=119 Identities=24% Similarity=0.298 Sum_probs=98.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+++|++|||||||++++.+..+.. +.||.+. ....+.++ ...+.+||++|++.+...+ ..+++.+|+
T Consensus 14 ~~~~ki~ivG~~~vGKSsL~~~l~~~~~~~-~~~t~g~--~~~~~~~~--~~~l~i~Dt~G~~~~~~~~--~~~~~~~~~ 86 (181)
T 1fzq_A 14 DQEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGF--NIKSVQSQ--GFKLNVWDIGGQRKIRPYW--RSYFENTDI 86 (181)
T ss_dssp SSCEEEEEEESTTSSHHHHHHHHCCSCCEE-EEEETTE--EEEEEEET--TEEEEEEECSSCGGGHHHH--HHHHTTCSE
T ss_pred CCceEEEEECCCCCCHHHHHHHHhcCCCCc-ccCcCCe--EEEEEEEC--CEEEEEEECCCCHHHHHHH--HHHhCCCCE
Confidence 456899999999999999999999987643 3467664 33455655 4678899999999998887 678899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+++|||++++++|..+..|+..+...... .++|+++|+||+|+.+.
T Consensus 87 ~i~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~NK~Dl~~~ 132 (181)
T 1fzq_A 87 LIYVIDSADRKRFEETGQELTELLEEEKL--SCVPVLIFANKQDLLTA 132 (181)
T ss_dssp EEEEEETTCGGGHHHHHHHHHHHTTCGGG--TTCCEEEEEECTTSTTC
T ss_pred EEEEEECcCHHHHHHHHHHHHHHHhChhh--cCCCEEEEEECcCcccC
Confidence 99999999999999999999887654221 26899999999999874
No 123
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.79 E-value=2.1e-19 Score=165.83 Aligned_cols=148 Identities=16% Similarity=0.094 Sum_probs=115.8
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhh---cCCccCCC-cCHHhHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKL---REGVNERG-LTLAGFLFL 124 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~---~~d~~~~g-i~~~eFl~~ 124 (430)
..|++++++.|+++|..||+|+||.|+.+||..++.+.+|..++.+++..++..+-... ..|.+++| |+|+||+.+
T Consensus 43 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~ 122 (226)
T 2lvv_A 43 RDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEF 122 (226)
T ss_dssp SSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHH
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHH
Confidence 46899999999999999999999999999999977777898888888888887761100 00246778 999999985
Q ss_pred HHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhh
Q 014101 125 HALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLF 204 (430)
Q Consensus 125 ~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~ 204 (430)
+..... ....+.++.+|+.||+|+||+|+.+||+.++
T Consensus 123 ~~~~~~-------------------------------------------~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l 159 (226)
T 2lvv_A 123 RLMLCY-------------------------------------------IYDIFELTVMFDTMDKDGSLLLELQEFKEAL 159 (226)
T ss_dssp HHHHHH-------------------------------------------HHHHHHHHHHHHHHSCSSCCEECHHHHHHHH
T ss_pred HHHHHh-------------------------------------------ccCHHHHHHHHHHHcCCCCCeEcHHHHHHHH
Confidence 321100 0112458899999999999999999999999
Q ss_pred ccC---CCCCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 205 STA---PECPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 205 ~~~---~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
... +........++..+|.|+||.|+|+||+..+.
T Consensus 160 ~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~EF~~~~~ 197 (226)
T 2lvv_A 160 PKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFSCWAV 197 (226)
T ss_dssp HHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHHHHHHHH
T ss_pred HHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 753 33333456688899999999999999998854
No 124
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.79 E-value=2.3e-20 Score=168.50 Aligned_cols=141 Identities=23% Similarity=0.262 Sum_probs=104.7
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..|++++++.|+++|+.+|+|+||.|+.+||..++..+ |..++.+++..+++.+ |.+++| |+|+||+.++..
T Consensus 49 ~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~-g~~~~~~~~~~l~~~~------D~d~~g~I~~~EF~~~~~~ 121 (197)
T 3pm8_A 49 KHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI-GYQKIPPDIHQVLRDI------DSNASGQIHYTDFLAATID 121 (197)
T ss_dssp HHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH-C----CHHHHHHHHC-------------CEEHHHHHHTTCC
T ss_pred HHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh-CCCCCHHHHHHHHHHh------CCCCCCeEcHHHHHHHHHH
Confidence 35799999999999999999999999999999998765 8889999999999998 677888 999999986421
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
.. .....+.++.+|+.||+|++|+|+.+||+.++...
T Consensus 122 ~~-------------------------------------------~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 158 (197)
T 3pm8_A 122 KQ-------------------------------------------TYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRD 158 (197)
T ss_dssp HH-------------------------------------------HHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC--
T ss_pred HH-------------------------------------------hhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 00 00113458899999999999999999999999865
Q ss_pred C-CCC---CCCCcccccccccCCcccchhhHHhhhh
Q 014101 208 P-ECP---WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 208 ~-~~~---~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+ +.. .....+++.+|.|+||.|||+||+..+.
T Consensus 159 ~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~ 194 (197)
T 3pm8_A 159 DIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194 (197)
T ss_dssp --CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 2 111 1224577899999999999999998754
No 125
>3r7w_A Gtpase1, GTP-binding protein GTR1; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_A*
Probab=99.79 E-value=5.5e-19 Score=170.68 Aligned_cols=140 Identities=10% Similarity=0.065 Sum_probs=106.9
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCC---CcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHH-----Hhhhcccc
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSD---NYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAV-----AKLLSNKD 355 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~---~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~-----~~~~~~~~ 355 (430)
..+||+++|++|||||||+++++++.... .+.+|.+..+. .+.+. +...+.+||++|++.+ ..++ ..
T Consensus 2 ~~~KI~lvG~~~vGKSSLi~~l~~~~~~~~~~~~~~Ti~~~~~--~~~~~-~~~~l~i~Dt~G~~~~~~~~~~~~~--~~ 76 (307)
T 3r7w_A 2 LGSKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHS--HLRFL-GNMTLNLWDCGGQDVFMENYFTKQK--DH 76 (307)
T ss_dssp CEEEEEEECCTTSSHHHHHHHHHSCCCTGGGGGCCCCCSEEEE--EEEET-TTEEEEEEEECCSHHHHHHHHTTTH--HH
T ss_pred CceEEEEECCCCCCHHHHHHHHHhCCCCccccCcCCccceEEE--EEEeC-CceEEEEEECCCcHHHhhhhhhhHH--HH
Confidence 45899999999999999999999874332 33456665554 45555 3678899999999888 4455 67
Q ss_pred ccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC--cc-----CcHHHHHHHHHHhC---
Q 014101 356 SLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDS--FA-----MAIQDSTRVFTFLV--- 425 (430)
Q Consensus 356 ~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~--~~-----v~~~~~~~~~~~~g--- 425 (430)
+++++|++++|||++++++|+.+..|...+...... .+++|+++|+||+|+.+ .+ +..+++.++++.+|
T Consensus 77 ~~~~ad~vi~V~D~t~~~s~~~l~~~~~~l~~l~~~-~~~~piilv~NK~Dl~~~~~r~~~~~v~~~~~~~~~~~~g~~~ 155 (307)
T 3r7w_A 77 IFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKY-SPDAKIFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPN 155 (307)
T ss_dssp HHTTCSEEEEEEETTCSCHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECGGGSCHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred HhccCCEEEEEEECCChhhHHHHHHHHHHHHHHHHh-CCCCeEEEEEecccccchhhhhHHHHHHHHHHHHHHHHcCCCC
Confidence 889999999999999999999987775444332110 13799999999999987 33 55689999999998
Q ss_pred Cccc
Q 014101 426 MVLY 429 (430)
Q Consensus 426 ~~~f 429 (430)
+++|
T Consensus 156 ~~~~ 159 (307)
T 3r7w_A 156 LIGF 159 (307)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 5554
No 126
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=99.79 E-value=5.5e-19 Score=158.62 Aligned_cols=119 Identities=18% Similarity=0.230 Sum_probs=93.9
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
+..+||+|+|++|||||||+++++++.+.. +.||.+ +....+... ...+.+||++|.+.+..++ ..+++++|+
T Consensus 27 ~~~~ki~v~G~~~vGKSsLi~~l~~~~~~~-~~~t~~--~~~~~~~~~--~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 99 (192)
T 2b6h_A 27 KKQMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIG--FNVETVEYK--NICFTVWDVGGQDKIRPLW--RHYFQNTQG 99 (192)
T ss_dssp TSCEEEEEEESTTSSHHHHHHHHCSSCCEE-EEEETT--EEEEEEEET--TEEEEEEECC-----CTTH--HHHHHTCCE
T ss_pred CCccEEEEECCCCCCHHHHHHHHHhCCccc-cCCcCc--eeEEEEEEC--CEEEEEEECCCCHhHHHHH--HHHhccCCE
Confidence 456899999999999999999999988764 346666 333455554 4778899999999988877 678899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+++|||++++++|..+..|+..+...... .++|+++|+||+|+.+.
T Consensus 100 iilv~D~~~~~s~~~~~~~l~~~~~~~~~--~~~piilv~NK~Dl~~~ 145 (192)
T 2b6h_A 100 LIFVVDSNDRERVQESADELQKMLQEDEL--RDAVLLVFANKQDMPNA 145 (192)
T ss_dssp EEEEEETTCGGGHHHHHHHHHHHHTCGGG--TTCEEEEEEECTTSTTC
T ss_pred EEEEEECCCHHHHHHHHHHHHHHhccccc--CCCeEEEEEECCCCCCC
Confidence 99999999999999999999988764322 26899999999999774
No 127
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens}
Probab=99.66 E-value=8e-21 Score=172.01 Aligned_cols=140 Identities=19% Similarity=0.246 Sum_probs=114.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+++|.+|||||||+++|+++.+...+.+|.+..+. ..+.+++....+.+||++|++.+..++ ..+++++|+
T Consensus 28 ~~~~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~l~i~Dt~G~~~~~~~~--~~~~~~~d~ 104 (204)
T 3th5_A 28 GQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGLWDTAGQEDYDRLR--PLSYPQTDV 104 (204)
Confidence 45689999999999999999999998887777677765543 445566556677799999999998887 678899999
Q ss_pred EEEEEECCChhhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-------------cCcHHHHHHHHHHhCC-c
Q 014101 363 AVFVHDSSDESSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-------------AMAIQDSTRVFTFLVM-V 427 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-------------~v~~~~~~~~~~~~g~-~ 427 (430)
+++|||++++.+|..+. .|+..+.... +++|+++|+||+|+.+. .+..+++.++++.+++ +
T Consensus 105 iilv~D~~~~~s~~~~~~~~~~~l~~~~----~~~piilv~NK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 180 (204)
T 3th5_A 105 FLICFSLVSPASFENVRAKWYPEVRHHC----PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVK 180 (204)
Confidence 99999999999999987 7887776643 26899999999999764 3456778888888887 6
Q ss_pred cc
Q 014101 428 LY 429 (430)
Q Consensus 428 ~f 429 (430)
+|
T Consensus 181 ~~ 182 (204)
T 3th5_A 181 YL 182 (204)
Confidence 54
No 128
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.78 E-value=1.4e-18 Score=168.79 Aligned_cols=141 Identities=19% Similarity=0.260 Sum_probs=119.0
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACD 361 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad 361 (430)
.+..+||+++|.+|||||||+++++++.+...+.+|++..+. ..+.+++....+.+||++|.+.+.... ..+++.+|
T Consensus 152 ~~~~~~i~i~G~~~~GKssli~~~~~~~~~~~~~~t~~~~~~-~~~~~~~~~~~~~l~Dt~G~~~~~~~~--~~~~~~~d 228 (332)
T 2wkq_A 152 AKELIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGLWDTAGLEDYDRLR--PLSYPQTD 228 (332)
T ss_dssp HTTCEEEEEEESTTSSHHHHHHHHHHSCCCCSCCCCSEEEEE-EEEEETTEEEEEEEEEECCCGGGTTTG--GGGCTTCS
T ss_pred ccceeEEEEECCCCCChHHHHHHHHhCCCCcccCCcccceeE-EEEEECCEEEEEEEEeCCCchhhhHHH--HHhccCCC
Confidence 456689999999999999999999999887777777766553 556667667778899999999988877 67899999
Q ss_pred EEEEEEECCChhhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCCC-------------ccCcHHHHHHHHHHhCC-
Q 014101 362 IAVFVHDSSDESSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLDS-------------FAMAIQDSTRVFTFLVM- 426 (430)
Q Consensus 362 ~vilv~D~t~~~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~-------------~~v~~~~~~~~~~~~g~- 426 (430)
++++|||++++.+|..+. .|+..+..... ++|+++|+||+|+.+ ..+..+++.++++.+++
T Consensus 229 ~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~----~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 304 (332)
T 2wkq_A 229 VFLICFSLVSPASFHHVRAKWYPEVRHHCP----NTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAV 304 (332)
T ss_dssp EEEEEEETTCHHHHHHHHHTHHHHHHHHCT----TSCEEEEEECHHHHTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCS
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHHHhhCC----CCcEEEEEEchhcccccchhhhccccccccccHHHHHHHHHHcCCc
Confidence 999999999999999987 68888877542 689999999999965 24678899999999997
Q ss_pred ccc
Q 014101 427 VLY 429 (430)
Q Consensus 427 ~~f 429 (430)
+||
T Consensus 305 ~~~ 307 (332)
T 2wkq_A 305 KYL 307 (332)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 129
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.78 E-value=6.2e-20 Score=158.44 Aligned_cols=142 Identities=17% Similarity=0.196 Sum_probs=114.5
Q ss_pred CccHHHHHHHHHHHHhhcC--CCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDH--DRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~--d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
.|++++++.|+++|..||+ |+||.|+.+||..++.. +|..++.+++..+ +.+ |.+++| |+|+||+.++.
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l-~~~------D~~~~g~i~~~eF~~~~~ 73 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRC-LGINPRNEDVFAV-GGT------HKMGEKSLPFEEFLPAYE 73 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHH-TTCCCCHHHHHHT-TCC------SSTTSCEECHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHH-cCCCCCHHHHHHH-Hhh------CCCCCCeeeHHHHHHHHH
Confidence 5899999999999999999 99999999999999776 5888999998888 665 677888 99999999865
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
..... .....+.++.+|+.||+|++|+|+.+||+.++..
T Consensus 74 ~~~~~-----------------------------------------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~ 112 (156)
T 1wdc_C 74 GLMDC-----------------------------------------EQGTFADYMEAFKTFDREGQGFISGAELRHVLTA 112 (156)
T ss_dssp HHTTS-----------------------------------------CCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHH
T ss_pred HHhhc-----------------------------------------cCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 32100 0011345889999999999999999999999987
Q ss_pred CCCCC--CCCCccccc--ccccCCcccchhhHHhhhhh
Q 014101 207 APECP--WDEAPYKDA--AEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 207 ~~~~~--~~~~~~~~~--~d~~~dg~i~~~ef~~~w~~ 240 (430)
.+... .....+++. +|.|+||.|+|+||+..+.-
T Consensus 113 ~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 113 LGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150 (156)
T ss_dssp SSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence 64322 223456778 99999999999999988653
No 130
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.78 E-value=5.5e-20 Score=164.82 Aligned_cols=141 Identities=18% Similarity=0.238 Sum_probs=114.8
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..|++++++.|+++|..+|+|+||.|+.+||..++.. +|..++++++..+++.+ |.+++| |+|+||+.++..
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~-~g~~~~~~~~~~l~~~~------D~d~dG~I~~~EF~~~~~~ 74 (188)
T 1s6i_A 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAA------DIDKSGTIDYGEFIAATVH 74 (188)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTT-TTCCCCHHHHHHHHHHT------CTTCSSEECHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHc------CCCCCCeEeHHHHHHHHHH
Confidence 3578888899999999999999999999999999765 58889999999999998 678889 999999987421
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
+..... .+.++.+|+.||+|++|+|+.+||+.++...
T Consensus 75 ----------------------------------~~~~~~---------~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~ 111 (188)
T 1s6i_A 75 ----------------------------------LNKLER---------EENLVSAFSYFDKDGSGYITLDEIQQACKDF 111 (188)
T ss_dssp ----------------------------------SSSSCC---------CCSTHHHHHHTTTTCSSEEEHHHHHHTTTTT
T ss_pred ----------------------------------HhccCH---------HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc
Confidence 000000 0126789999999999999999999999876
Q ss_pred CCCCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 208 PECPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 208 ~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+..+.....+++.+|.|+||.|+|+||+..+.
T Consensus 112 g~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 143 (188)
T 1s6i_A 112 GLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMR 143 (188)
T ss_dssp TCCTTHHHHHHHHHCSSSSSEEETTHHHHTTS
T ss_pred CCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 53333345677899999999999999998854
No 131
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.78 E-value=2.4e-19 Score=161.81 Aligned_cols=141 Identities=20% Similarity=0.239 Sum_probs=108.2
Q ss_pred cHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHH
Q 014101 52 KPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIE 130 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~ 130 (430)
...+++.++++|+.+|+|+||.|+.+||..++.. +|..++.+++..+++.+ |.+++| |+|+||+.++.
T Consensus 32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~------D~d~dg~i~~~ef~~~~~---- 100 (204)
T 3e3r_A 32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAK-LGLVLDQAEAEGVCRKW------DRNGSGTLDLEEFLRALR---- 100 (204)
T ss_dssp --------CHHHHHHCTTCCSSBCHHHHHHHHHT-TTCCCCHHHHHHHHHHH------CTTCSSSBCHHHHHHHTS----
T ss_pred CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHH-cCCCCCHHHHHHHHHHh------ccCCCCcCcHHHHHHHHH----
Confidence 4567889999999999999999999999999765 58889999999999999 677888 99999998742
Q ss_pred cCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCC-
Q 014101 131 KGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPE- 209 (430)
Q Consensus 131 ~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~- 209 (430)
. .......+.++.+|+.||.||+|.|+.+||..++...+.
T Consensus 101 ---------------------------~------------~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~ 141 (204)
T 3e3r_A 101 ---------------------------P------------PMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHP 141 (204)
T ss_dssp ---------------------------C------------CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCH
T ss_pred ---------------------------h------------hcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCC
Confidence 0 011234456899999999999999999999999985321
Q ss_pred -----CCC---CCCcccccccc-cCCcccchhhHHhhhhhhh
Q 014101 210 -----CPW---DEAPYKDAAEK-TALGGLSLDGFLSEWALMT 242 (430)
Q Consensus 210 -----~~~---~~~~~~~~~d~-~~dg~i~~~ef~~~w~~~~ 242 (430)
... ....+++.+|. |+||.|+|+||+..+.-..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~ 183 (204)
T 3e3r_A 142 KVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVS 183 (204)
T ss_dssp HHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred ccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence 111 12346678998 9999999999999876554
No 132
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.78 E-value=1.6e-20 Score=161.20 Aligned_cols=141 Identities=15% Similarity=0.186 Sum_probs=105.0
Q ss_pred CccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCcc--CCC-cCHHhHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVN--ERG-LTLAGFLFLHA 126 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~--~~g-i~~~eFl~~~~ 126 (430)
.|++++++.++++|..||+|+||.|+.+||..++.. +|..++.+++..+++.+ |.+ ++| |+|+||+.++.
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~------d~~~~~~g~i~~~eF~~~~~ 75 (151)
T 1w7j_B 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRA-LGQNPTNAEVLKVLGNP------KSDELKSRRVDFETFLPMLQ 75 (151)
T ss_dssp --------CHHHHHHHHCCSSSSEEESTTHHHHHHH-TTCCCCHHHHHHHTTCC------CHHHHTTCEEEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHh------CcCcCCCCcCcHHHHHHHHH
Confidence 578999999999999999999999999999999775 58889999999988877 556 778 99999999865
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
..... ..+...+.++.+|+.||+|++|+|+.+||+.++..
T Consensus 76 ~~~~~----------------------------------------~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~ 115 (151)
T 1w7j_B 76 AVAKN----------------------------------------RGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTT 115 (151)
T ss_dssp HHCC------------------------------------------------CCHHHHHTTCTTSSSEEEHHHHHHHHHH
T ss_pred HHhcc----------------------------------------CCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 32100 00011233678999999999999999999999987
Q ss_pred CCCCC--CCCCcccccccccCCcccchhhHHhhh
Q 014101 207 APECP--WDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 207 ~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
.+... .....+++.+| |+||.|+|+||+..+
T Consensus 116 ~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~ 148 (151)
T 1w7j_B 116 LGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHI 148 (151)
T ss_dssp SSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHT
T ss_pred cCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHH
Confidence 64322 22345778899 999999999999875
No 133
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.78 E-value=3.2e-19 Score=159.65 Aligned_cols=153 Identities=15% Similarity=0.217 Sum_probs=108.3
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHH-----HHHHHhcCCCCCHH-----HHHHHHHHHHhhhcCCccCCC-c
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELN-----DFQVKCFNSPLQPS-----EIVGVKRVVQEKLREGVNERG-L 116 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~-----~~~~~~~g~~~~~~-----e~~~i~~~~~~~~~~d~~~~g-i 116 (430)
.+.+++++++.|+++|+.+|+|+||.|+.+||. .+++ .+|..++.. ++..+++.+ |.+++| |
T Consensus 11 ~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~-~~g~~~~~~~~~~~~~~~l~~~~------D~d~~g~i 83 (195)
T 1qv0_A 11 TDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICA-KLEATPEQTKRHQVCVEAFFRGC------GMEYGKEI 83 (195)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHH-HTTCCHHHHHHHHHHHHHHHHHT------TCCTTCCB
T ss_pred cccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHH-HcCCCccHHHHHHHHHHHHHHHc------CCCCCceE
Confidence 345699999999999999999999999999999 4544 457777766 577777777 678888 9
Q ss_pred CHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCC
Q 014101 117 TLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLR 196 (430)
Q Consensus 117 ~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is 196 (430)
+|+||+.++......... .| . + .. .......+..+|+.||+||+|.|+
T Consensus 84 ~~~EF~~~~~~~~~~~~~--~~------~------------~--------~~----~~~~~~~~~~~F~~~D~d~~G~I~ 131 (195)
T 1qv0_A 84 AFPQFLDGWKQLATSELK--KW------A------------R--------NE----PTLIREWGDAVFDIFDKDGSGTIT 131 (195)
T ss_dssp CHHHHHHHHHHHHHHHHH--HH------H------------T--------TC----CCHHHHHHHHHHHHTC----CEEC
T ss_pred cHHHHHHHHHHHHhhhhh--cc------c------------c--------cH----HHHHHHHHHHHHHHhcCCCCCcCc
Confidence 999999987643311000 00 0 0 00 000112344899999999999999
Q ss_pred HHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 197 PIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 197 ~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+||+.++...+... .....+++.+|.|+||.|+|+||+..+.
T Consensus 132 ~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 176 (195)
T 1qv0_A 132 LDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 176 (195)
T ss_dssp HHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 999999998654321 2234577889999999999999998854
No 134
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.78 E-value=3.2e-19 Score=155.07 Aligned_cols=143 Identities=12% Similarity=0.118 Sum_probs=109.9
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHH---HhcCCCCCHHHHHHHH-----------HHHHhhhcCCccCCC-cCHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQV---KCFNSPLQPSEIVGVK-----------RVVQEKLREGVNERG-LTLA 119 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~---~~~g~~~~~~e~~~i~-----------~~~~~~~~~d~~~~g-i~~~ 119 (430)
+++.|+++|..+|+|+||.|+.+||..++. +.+|..++.+++..+. +.+ |.+++| |+++
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~------D~d~~g~i~~~ 75 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIA------DRDGDQRITRE 75 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHH------CTTSSSCEEHH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHh------CCCCCCcCcHH
Confidence 568899999999999999999999999853 3468899999888774 444 677888 9999
Q ss_pred hHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHH
Q 014101 120 GFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIE 199 (430)
Q Consensus 120 eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~e 199 (430)
||+.++......... .......+.++.+|+.||+||+|.|+.+|
T Consensus 76 ef~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~F~~~D~d~~G~i~~~E 119 (166)
T 3akb_A 76 EFVTGAVKRLRDKPD------------------------------------RFAEMARPFLHAALGVADTDGDGAVTVAD 119 (166)
T ss_dssp HHHHTHHHHHHHSHH------------------------------------HHHHHHHHHHHHHHHHHCSSSSSCCBHHH
T ss_pred HHHHHHHHHhccCcc------------------------------------chHHHHHHHHHHHHHHhCCCCCCcCCHHH
Confidence 999876543211000 00011234588999999999999999999
Q ss_pred HHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 200 VEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 200 l~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
|+.++...+........+++.+|.|+||.|+++||+..+.
T Consensus 120 ~~~~l~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~ 159 (166)
T 3akb_A 120 TARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVPAFA 159 (166)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHCTTCSSBCCHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999987652112234577889999999999999998854
No 135
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=99.78 E-value=1.6e-19 Score=162.47 Aligned_cols=143 Identities=11% Similarity=0.037 Sum_probs=102.2
Q ss_pred hccCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEE--EEEcC-CCeEEEEEEeCCChhHHHhhh-cccc
Q 014101 280 QAERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVN--VVDQP-GGTKKTVVLREIPEEAVAKLL-SNKD 355 (430)
Q Consensus 280 ~~~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~--~v~~~-~~~~~~~i~d~~G~e~~~~~~-~~~~ 355 (430)
......+||+++|++|||||||++++.+.... . ++.+.++... ...+. +....+.+||++|++.+.... ....
T Consensus 15 ~~~~~~~ki~~vG~~~vGKTsLi~~l~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~l~i~Dt~G~~~~~~~~~~~~~ 91 (196)
T 3llu_A 15 YFQGSKPRILLMGLRRSGKSSIQKVVFHKMSP-N--ETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTFDYEM 91 (196)
T ss_dssp -----CCEEEEEESTTSSHHHHHHHHHSCCCG-G--GGGGCCCCCSCEEEEECCTTSCCEEEEECCSSCCTTCTTCCHHH
T ss_pred cccCcceEEEEECCCCCCHHHHHHHHHhcCCC-c--ceeeeccccceeeeeccCCCeeEEEEEECCCCHHHHhhhhhccc
Confidence 33456789999999999999999988875332 2 3333333222 22232 456788999999998876553 1136
Q ss_pred ccccccEEEEEEECCCh--hhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc--------cCcHHHHHHHHH---
Q 014101 356 SLAACDIAVFVHDSSDE--SSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF--------AMAIQDSTRVFT--- 422 (430)
Q Consensus 356 ~~~~ad~vilv~D~t~~--~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~--------~v~~~~~~~~~~--- 422 (430)
+++++|++++|||++++ +++..+..|+..+.... +++|++|||||+|+.+. .+..++++++++
T Consensus 92 ~~~~~~~~i~v~d~~~~~~~~~~~~~~~l~~~~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~v~~~~~~~~~~~~~ 167 (196)
T 3llu_A 92 IFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVN----PDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGL 167 (196)
T ss_dssp HHHTCSEEEEEEETTSCCHHHHHHHHHHHHHHHHHC----TTCEEEEEEECGGGSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccCCEEEEEEECCCchHHHHHHHHHHHHHHHhcC----CCCcEEEEEeccccCchhhhhHHHhHHHHHHHHHHHHhhh
Confidence 78999999999999997 77788888888875443 27999999999998662 355677888888
Q ss_pred -HhCCccc
Q 014101 423 -FLVMVLY 429 (430)
Q Consensus 423 -~~g~~~f 429 (430)
.++++||
T Consensus 168 ~~~~~~~~ 175 (196)
T 3llu_A 168 EKLHLSFY 175 (196)
T ss_dssp TTSCEEEE
T ss_pred hcCCcceE
Confidence 6677765
No 136
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=99.77 E-value=2.8e-18 Score=156.27 Aligned_cols=125 Identities=18% Similarity=0.182 Sum_probs=93.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCC-eEEEEEEeCCChhHHHh-hhccccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGG-TKKTVVLREIPEEAVAK-LLSNKDSLAAC 360 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~-~~~~~i~d~~G~e~~~~-~~~~~~~~~~a 360 (430)
+..+||+++|++|||||||+++|+++.+...+ ++++..+. .+.+++. ...+.+||++|++.+.. ++ ..+++.+
T Consensus 5 ~~~~ki~vvG~~~~GKTsli~~l~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~i~Dt~G~~~~~~~~~--~~~~~~~ 79 (214)
T 2fh5_B 5 SSQRAVLFVGLCDSGKTLLFVRLLTGQYRDTQ-TSITDSSA--IYKVNNNRGNSLTLIDLPGHESLRFQLL--DRFKSSA 79 (214)
T ss_dssp ---CEEEEECSTTSSHHHHHHHHHHSCCCCBC-CCCSCEEE--EEECSSTTCCEEEEEECCCCHHHHHHHH--HHHGGGE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCccccc-CCcceeeE--EEEecCCCccEEEEEECCCChhHHHHHH--HHHHhhC
Confidence 34589999999999999999999999887776 44444443 3666644 57789999999999887 66 5778999
Q ss_pred cEEEEEEECCChh-hHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccC
Q 014101 361 DIAVFVHDSSDES-SWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAM 412 (430)
Q Consensus 361 d~vilv~D~t~~~-S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v 412 (430)
|++++|||+++.. ++..+..|+..+.........++|+++|+||+|+.....
T Consensus 80 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~~~~ 132 (214)
T 2fh5_B 80 RAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKS 132 (214)
T ss_dssp EEEEEEEETTTHHHHHHHHHHHHHHHHHHHHTSTTCCEEEEEEECTTSTTCCC
T ss_pred CEEEEEEECCCcCHHHHHHHHHHHHHHhhhhhcccCCCEEEEEECCCCCCccc
Confidence 9999999999854 576666665554332111113689999999999987543
No 137
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.77 E-value=6.3e-19 Score=152.18 Aligned_cols=138 Identities=17% Similarity=0.245 Sum_probs=108.7
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...|++++++.|+++|..||+|+||.|+.+||..++..+ |..++.+++..++.. ++| |+|+||+.++.
T Consensus 9 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~----------~~g~i~~~eF~~~~~ 77 (156)
T 1wdc_B 9 LTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQL-GRAPDDKELTAMLKE----------APGPLNFTMFLSIFS 77 (156)
T ss_dssp ---CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHH-SSCCCHHHHHHHHTT----------SSSCCCHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHh----------CCCcCcHHHHHHHHH
Confidence 356899999999999999999999999999999998764 888899888877742 456 99999999865
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
..... ....+.++.+|+.||+|++|+|+.+||+.++..
T Consensus 78 ~~~~~------------------------------------------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~ 115 (156)
T 1wdc_B 78 DKLSG------------------------------------------TDSEETIRNAFAMFDEQETKKLNIEYIKDLLEN 115 (156)
T ss_dssp HHTCS------------------------------------------CCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHH
T ss_pred HHhcC------------------------------------------CChHHHHHHHHHHHCcCCCCccCHHHHHHHHHH
Confidence 32100 001245889999999999999999999999987
Q ss_pred CCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 207 APECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 207 ~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+... .....+++.+|.| ||.|+|+||+..+.
T Consensus 116 ~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~ 149 (156)
T 1wdc_B 116 MGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK 149 (156)
T ss_dssp SSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHH
T ss_pred hCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHh
Confidence 54321 2234577889999 99999999998754
No 138
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=99.77 E-value=1.1e-18 Score=155.67 Aligned_cols=119 Identities=19% Similarity=0.171 Sum_probs=98.9
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
++.+||+++|++|||||||++++.++.+.. +.||.+... ..+..+ ...+.+||++|++.+..++ ..+++++|+
T Consensus 20 ~~~~~i~v~G~~~~GKssli~~l~~~~~~~-~~~t~~~~~--~~~~~~--~~~~~~~Dt~G~~~~~~~~--~~~~~~~d~ 92 (189)
T 2x77_A 20 DRKIRVLMLGLDNAGKTSILYRLHLGDVVT-TVPTVGVNL--ETLQYK--NISFEVWDLGGQTGVRPYW--RCYFSDTDA 92 (189)
T ss_dssp TSCEEEEEEEETTSSHHHHHHHTCCSCCEE-ECSSTTCCE--EEEEET--TEEEEEEEECCSSSSCCCC--SSSSTTCCE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHcCCCCC-cCCCCceEE--EEEEEC--CEEEEEEECCCCHhHHHHH--HHHhhcCCE
Confidence 356899999999999999999999888764 447776443 445555 4778899999999888777 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+++|||+++++++..+..|+..+...... .++|+++|+||+|+.+.
T Consensus 93 ii~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~nK~Dl~~~ 138 (189)
T 2x77_A 93 VIYVVDSTDRDRMGVAKHELYALLDEDEL--RKSLLLIFANKQDLPDA 138 (189)
T ss_dssp EEEEEETTCCTTHHHHHHHHHHHHTCSTT--TTCEEEEEEECTTSTTC
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHhhhhc--CCCeEEEEEECCCCcCC
Confidence 99999999999999999999888765322 37899999999999774
No 139
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.77 E-value=2e-19 Score=154.83 Aligned_cols=140 Identities=19% Similarity=0.257 Sum_probs=111.3
Q ss_pred cccCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 46 QESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 46 ~~~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
+....|++++++.|+++|+.||+|+||.|+.+||..++.. +|..++.+++..++..+ +| |+|+||+.+
T Consensus 5 ~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~----------~g~i~~~eF~~~ 73 (153)
T 2ovk_B 5 PRRVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSS-LGRVPPDDELNAMLKEC----------PGQLNFTAFLTL 73 (153)
T ss_dssp --CTTCCHHHHHHHHHHHHHHCCSTTTCCCHHHHHHHTTT-TTSCCCHHHHHHHHHHS----------SSCCCSHHHHHT
T ss_pred cccCCCCHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHH-hCCCCCHHHHHHHHHHc----------CCCCCHHHHHHH
Confidence 4467799999999999999999999999999999999765 58889999999988874 35 999999987
Q ss_pred HHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhh
Q 014101 125 HALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLF 204 (430)
Q Consensus 125 ~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~ 204 (430)
+.... .. . ...+.++.+|+.||+||+|+|+.+||+.++
T Consensus 74 ~~~~~---------------------------------~~-~--------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l 111 (153)
T 2ovk_B 74 FGEKV---------------------------------SG-T--------DPEDALRNAFSMFDEDGQGFIPEDYLKDLL 111 (153)
T ss_dssp TTTTT---------------------------------TT-C--------CCTTHHHHHHHTTCSSCSSCCCHHHHHHHH
T ss_pred HHHHh---------------------------------cc-C--------ChHHHHHHHHHHHCCCCCCeEcHHHHHHHH
Confidence 43100 00 0 011347899999999999999999999999
Q ss_pred ccCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 205 STAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 205 ~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
...+... .....+++.+|. +||.|+|+||+..+.
T Consensus 112 ~~~g~~~~~~~~~~~~~~~d~-~dg~I~~~eF~~~~~ 147 (153)
T 2ovk_B 112 ENMGDNFSKEEIKNVWKDAPL-KNKQFNYNKMVDIKG 147 (153)
T ss_dssp HHSSSCCCHHHHHHHHHHCCE-ETTEECHHHHHHHHH
T ss_pred HHcCCCCCHHHHHHHHHHcCC-CCCEEeHHHHHHHHh
Confidence 8754321 223457788999 999999999998764
No 140
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.77 E-value=6.5e-19 Score=154.60 Aligned_cols=148 Identities=18% Similarity=0.183 Sum_probs=109.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc---CCCCCHHH-HHHHHHHHHhh--hcCCccCCC-cCHHhHHHH
Q 014101 52 KPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCF---NSPLQPSE-IVGVKRVVQEK--LREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~---g~~~~~~e-~~~i~~~~~~~--~~~d~~~~g-i~~~eFl~~ 124 (430)
|+++++.|+++|+.+|+|+||.|+.+||..++..++ |..++.++ +..++...-.. ...| ++| |+|+||+.+
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~ 78 (174)
T 1q80_A 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINS 78 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHH
Confidence 578899999999999999999999999999987653 37788877 65432111111 0113 667 999999998
Q ss_pred HHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhh
Q 014101 125 HALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLF 204 (430)
Q Consensus 125 ~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~ 204 (430)
+...... . .......+.++.+|+.||+|++|+|+.+||+.++
T Consensus 79 ~~~~~~~----------------------------------~----~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l 120 (174)
T 1q80_A 79 MKEMVKN----------------------------------P----EAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120 (174)
T ss_dssp HHHHTTS----------------------------------T----TCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred HHHHcCc----------------------------------c----cHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHH
Confidence 6532210 0 0001223568899999999999999999999999
Q ss_pred ccCCCCCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 205 STAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 205 ~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
...+..+.....+++.+|.|+||.|+|+||+..+.
T Consensus 121 ~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~ 155 (174)
T 1q80_A 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155 (174)
T ss_dssp HHHTCCGGGHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHhCCCCCceEeHHHHHHHHH
Confidence 87543333345677889999999999999998864
No 141
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.77 E-value=8.6e-19 Score=156.19 Aligned_cols=153 Identities=13% Similarity=0.112 Sum_probs=112.6
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHH-----HHHHHhcCCCCCHH-----HHHHHHHHHHhhhcCCccCCC-c
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELN-----DFQVKCFNSPLQPS-----EIVGVKRVVQEKLREGVNERG-L 116 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~-----~~~~~~~g~~~~~~-----e~~~i~~~~~~~~~~d~~~~g-i 116 (430)
...+++++++.|+++|..||+|+||.|+.+||. .+++ .+|..++.. ++..+++.+ |.+++| |
T Consensus 7 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~-~~g~~~~~~~~~~~~~~~l~~~~------D~d~~g~i 79 (191)
T 1uhk_A 7 SDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVIN-NLGATPEQAKRHKDAVEAFFGGA------GMKYGVET 79 (191)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHT------TCCTTCEE
T ss_pred hccCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHH-HcCCCchhHHHHHHHHHHHHHHh------CcCCCCcC
Confidence 345689999999999999999999999999999 5544 468777777 577777777 678889 9
Q ss_pred CHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCC
Q 014101 117 TLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLR 196 (430)
Q Consensus 117 ~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is 196 (430)
+|+||+.++........ +.+. . . ........++.+|+.||+|++|+|+
T Consensus 80 ~~~EF~~~~~~~~~~~~--------~~~~------------~--------~----~~~~~~~~~~~~F~~~D~d~~G~Is 127 (191)
T 1uhk_A 80 DWPAYIEGWKKLATDEL--------EKYA------------K--------N----EPTLIRIWGDALFDIVDKDQNGAIT 127 (191)
T ss_dssp EHHHHHHHHHHHHHHHH--------HHHH------------T--------T----CCCHHHHHHHHHHHHHCTTCSSEEC
T ss_pred cHHHHHHHHHHHhcchh--------hhhh------------h--------h----hHHHHHHHHHHHHHHhcCCCCCcCc
Confidence 99999998764321100 0000 0 0 0000112234899999999999999
Q ss_pred HHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 197 PIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 197 ~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+||+.++...+... .....+++.+|.|+||.|+|+||+..+.
T Consensus 128 ~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~ 172 (191)
T 1uhk_A 128 LDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172 (191)
T ss_dssp HHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 999999997654321 2234577889999999999999999865
No 142
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=99.77 E-value=2.2e-18 Score=152.65 Aligned_cols=119 Identities=18% Similarity=0.162 Sum_probs=95.4
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
++.+||+++|++|||||||++++.++.+ ..+.+|.+... ..+.++ ...+.+||++|.+.+...+ ..+++.+|+
T Consensus 16 ~~~~~i~v~G~~~~GKssli~~l~~~~~-~~~~~t~~~~~--~~~~~~--~~~~~i~Dt~G~~~~~~~~--~~~~~~~d~ 88 (183)
T 1moz_A 16 NKELRILILGLDGAGKTTILYRLQIGEV-VTTKPTIGFNV--ETLSYK--NLKLNVWDLGGQTSIRPYW--RCYYADTAA 88 (183)
T ss_dssp SSCEEEEEEEETTSSHHHHHHHTCCSEE-EEECSSTTCCE--EEEEET--TEEEEEEEEC----CCTTG--GGTTTTEEE
T ss_pred CCccEEEEECCCCCCHHHHHHHHhcCCc-CccCCcCccce--EEEEEC--CEEEEEEECCCCHhHHHHH--HHHhccCCE
Confidence 4678999999999999999999998887 44457777443 455555 3778899999999888877 788999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+++|||++++.+++.+..|+..+...... .++|+++|+||+|+.+.
T Consensus 89 ii~v~d~~~~~s~~~~~~~~~~~~~~~~~--~~~piilv~nK~Dl~~~ 134 (183)
T 1moz_A 89 VIFVVDSTDKDRMSTASKELHLMLQEEEL--QDAALLVFANKQDQPGA 134 (183)
T ss_dssp EEEEEETTCTTTHHHHHHHHHHHTTSSTT--SSCEEEEEEECTTSTTC
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHcChhh--CCCeEEEEEECCCCCCC
Confidence 99999999999999999999988765322 37899999999999773
No 143
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.76 E-value=6.3e-19 Score=156.51 Aligned_cols=135 Identities=18% Similarity=0.253 Sum_probs=105.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHH
Q 014101 52 KPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIE 130 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~ 130 (430)
++++++.++++|+.+|+|+||.|+.+||..++..+ |. .++++..++..+ |.+++| |+|+||+.++..
T Consensus 34 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~-g~--~~~~~~~~~~~~------D~d~~g~i~~~Ef~~~~~~--- 101 (180)
T 3mse_B 34 INNHIKYINELFYKLDTNHNGSLSHREIYTVLASV-GI--KKWDINRILQAL------DINDRGNITYTEFMAGCYR--- 101 (180)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHT-TC--CHHHHHHHHHHH------CTTCCSEECHHHHHHHHSC---
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc-CC--CHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHh---
Confidence 38899999999999999999999999999998764 54 468899999988 678889 999999987420
Q ss_pred cCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCC
Q 014101 131 KGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPEC 210 (430)
Q Consensus 131 ~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~ 210 (430)
... ...+.++.+|+.||+|++|+|+.+||+.++...+..
T Consensus 102 -------------------------------~~~----------~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~ 140 (180)
T 3mse_B 102 -------------------------------WKN----------IESTFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLD 140 (180)
T ss_dssp -------------------------------CTT----------C--CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSCC
T ss_pred -------------------------------ccc----------CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCCC
Confidence 000 001347899999999999999999999999842222
Q ss_pred CCCCCcccccccccCC--------cccchhhHHhhhh
Q 014101 211 PWDEAPYKDAAEKTAL--------GGLSLDGFLSEWA 239 (430)
Q Consensus 211 ~~~~~~~~~~~d~~~d--------g~i~~~ef~~~w~ 239 (430)
+.....+++.+|.|+| |.|+|+||+..+.
T Consensus 141 ~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~ 177 (180)
T 3mse_B 141 NNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYML 177 (180)
T ss_dssp HHHHHHHHHHHHTC---------CCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHH
Confidence 2223457788999988 9999999998753
No 144
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.76 E-value=7.1e-19 Score=149.42 Aligned_cols=135 Identities=15% Similarity=0.192 Sum_probs=107.7
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHH
Q 014101 51 LKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFI 129 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~ 129 (430)
||+++ ++++|+.+|+|+||.|+.+||..++.. +|..++.+++..++.. +++| |+|+||+.++..
T Consensus 2 ls~~e---l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~---------~~~g~i~~~eF~~~~~~-- 66 (145)
T 2bl0_B 2 ASADQ---IQECFQIFDKDNDGKVSIEELGSALRS-LGKNPTNAELNTIKGQ---------LNAKEFDLATFKTVYRK-- 66 (145)
T ss_dssp CCHHH---HHHHHHHHCTTCSSCEEGGGHHHHHHH-TTCCCCHHHHHHHHHH---------HTSSEECHHHHHHHHTS--
T ss_pred CCHHH---HHHHHHHhCCCCcCccCHHHHHHHHHH-hCCCCCHHHHHHHHHh---------cCCCeEcHHHHHHHHHH--
Confidence 67776 999999999999999999999999776 5888999999888876 3567 999999987531
Q ss_pred HcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCC
Q 014101 130 EKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPE 209 (430)
Q Consensus 130 ~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~ 209 (430)
.. . ......+.++.+|+.||+|++|.|+.+||+.++...+.
T Consensus 67 --------------------------------~~-~------~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~ 107 (145)
T 2bl0_B 67 --------------------------------PI-K------TPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGD 107 (145)
T ss_dssp --------------------------------CC-C------CGGGGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSS
T ss_pred --------------------------------Hh-h------cCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCC
Confidence 00 0 01123456889999999999999999999999987643
Q ss_pred CC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 210 CP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 210 ~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.. .....+++.+|.|+||.|+|+||+..+.
T Consensus 108 ~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 139 (145)
T 2bl0_B 108 ALTSSEVEELMKEVSVSGDGAINYESFVDMLV 139 (145)
T ss_dssp CCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHH
Confidence 22 2234577899999999999999998864
No 145
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.76 E-value=4.6e-19 Score=155.81 Aligned_cols=131 Identities=17% Similarity=0.250 Sum_probs=103.0
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCC
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGR 133 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~ 133 (430)
+.++|+++|+.+|+|+||.|+.+||..++..+++.+++.+++..+++.+ |.+++| |+|+||+.++..
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~------D~~~~g~i~~~ef~~~~~~------ 72 (172)
T 2znd_A 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMF------DRENKAGVNFSEFTGVWKY------ 72 (172)
T ss_dssp -CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHH------CSSSSSEECHHHHHHHHHH------
T ss_pred chhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHh------CCCCCCcCCHHHHHHHHHH------
Confidence 4678999999999999999999999999775444789999999999998 678889 999999987541
Q ss_pred chhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--
Q 014101 134 LETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP-- 211 (430)
Q Consensus 134 ~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~-- 211 (430)
.+.++.+|+.||+|++|.|+.+||+.++...+...
T Consensus 73 -------------------------------------------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~ 109 (172)
T 2znd_A 73 -------------------------------------------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD 109 (172)
T ss_dssp -------------------------------------------HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCH
T ss_pred -------------------------------------------HHHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCH
Confidence 12367788888888888888888888887653221
Q ss_pred CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 212 WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 212 ~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
.....+++.+|.|+||.|+|+||+..+..
T Consensus 110 ~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 138 (172)
T 2znd_A 110 QFHDILIRKFDRQGRGQIAFDDFIQGCIV 138 (172)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 12234567788888888888888887654
No 146
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.76 E-value=6.7e-19 Score=155.03 Aligned_cols=129 Identities=20% Similarity=0.246 Sum_probs=100.3
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcC-------CCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCFN-------SPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g-------~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
++++|+++|..+| |+||.|+.+||..++..++| .+++.+++..+++.+ |.+++| |+|+||+.++.
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~------D~~~~g~i~~~eF~~~~~ 74 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVM------DSDTTGKLGFEEFKYLWN 74 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHH------CTTCSSSBCHHHHHHHHH
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHH------cCCCCCccCHHHHHHHHH
Confidence 6789999999999 99999999999999888755 678899999999998 678888 99999998864
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
. .+.++.+|+.||+|++|.|+.+||+.++..
T Consensus 75 ~-------------------------------------------------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~ 105 (173)
T 1alv_A 75 N-------------------------------------------------IKKWQAIYKQFDVDRSGTIGSSELPGAFEA 105 (173)
T ss_dssp H-------------------------------------------------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHH
T ss_pred H-------------------------------------------------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 2 123667888888888888888888887765
Q ss_pred CCCCC--CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 207 APECP--WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 207 ~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
.+..+ .....+++.+| |+||.|+|+||+..+..
T Consensus 106 ~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~ 140 (173)
T 1alv_A 106 AGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR 140 (173)
T ss_dssp HTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence 43221 11234555667 78888888888777653
No 147
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.76 E-value=2.9e-19 Score=161.03 Aligned_cols=137 Identities=19% Similarity=0.203 Sum_probs=110.9
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..|++++++.|+++|..||.|+||.|+.+||..++.. +|..++..++..++..+ +| |+|+||+.++..
T Consensus 49 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~l~~~~----------~g~i~~~eF~~~~~~ 117 (196)
T 3dtp_E 49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDS-LGRLCTEQELDSMVAEA----------PGPINFTMFLTIFGD 117 (196)
T ss_dssp CSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHT-TSCCCCHHHHHHHHTTS----------SSCCBHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHc----------cCCCcHHHHHHHHHH
Confidence 5689999999999999999999999999999999765 58889999988887653 46 999999998642
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
.+ . . ....+.++.+|+.||.|++|+|+.+||+.++ ..
T Consensus 118 ~~----------------------------~-----~---------~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~ 154 (196)
T 3dtp_E 118 RI----------------------------A-----G---------TDEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TW 154 (196)
T ss_dssp CC----------------------------C-----S---------SCCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HS
T ss_pred Hh----------------------------c-----C---------CCcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-Hc
Confidence 11 0 0 0113458899999999999999999999999 65
Q ss_pred CCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 208 PECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 208 ~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+... .....++..+|.|+||.|+|+||+..+.
T Consensus 155 g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 188 (196)
T 3dtp_E 155 GEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILT 188 (196)
T ss_dssp SSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHH
Confidence 4321 2234577899999999999999998864
No 148
>3r7w_B Gtpase2, GTP-binding protein GTR2; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_B*
Probab=99.76 E-value=3.1e-19 Score=171.74 Aligned_cols=132 Identities=12% Similarity=0.101 Sum_probs=100.3
Q ss_pred EEEEeCCCCCCHHHHHHHHhCCCCCC---CcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHh---hhccccccccc
Q 014101 287 QCFVFGPKKAGKSVLLNSFLGRPFSD---NYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAK---LLSNKDSLAAC 360 (430)
Q Consensus 287 kI~vvG~~~vGKSSLi~~l~~~~~~~---~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~---~~~~~~~~~~a 360 (430)
||+++|++|||||||++++.++.+.. ...||++.++.. + . ....+.+|||+|+++|.. .. ..+++++
T Consensus 1 KIvllGdsgvGKTSLl~~~~~~~~~~~~~~~~~Tig~~~~~--v--~-~~v~LqIWDTAGQErf~~~~l~~--~~yyr~a 73 (331)
T 3r7w_B 1 MVLLMGVRRCGKSSICKVVFHNMQPLDTLYLESTSNPSLEH--F--S-TLIDLAVMELPGQLNYFEPSYDS--ERLFKSV 73 (331)
T ss_dssp CEEEECSTTSSTTHHHHHHHSCCCSGGGTTCCCCCSCCCEE--E--C-SSSCEEEEECCSCSSSCCCSHHH--HHHHTTC
T ss_pred CEEEECCCCCCHHHHHHHHHcCCCCCccceecCeeeeeeEE--E--c-cEEEEEEEECCCchhccchhhhh--hhhccCC
Confidence 68999999999999999988765433 245788877642 2 3 457799999999999863 23 6789999
Q ss_pred cEEEEEEECCCh--hhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc--------cCcHHHHHHHHHH----hCC
Q 014101 361 DIAVFVHDSSDE--SSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF--------AMAIQDSTRVFTF----LVM 426 (430)
Q Consensus 361 d~vilv~D~t~~--~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~--------~v~~~~~~~~~~~----~g~ 426 (430)
+++|+|||++++ +++..+.+|+..+.... +++|+++||||+|+.+. .+..++++++|+. +++
T Consensus 74 ~~~IlV~Ditd~~~~~~~~l~~~l~~~~~~~----~~ipillvgNK~DL~~~~~R~~~~R~V~~~~~~~la~~~~~~~~i 149 (331)
T 3r7w_B 74 GALVYVIDSQDEYINAITNLAMIIEYAYKVN----PSINIEVLIHKVDGLSEDFKVDAQRDIMQRTGEELLELGLDGVQV 149 (331)
T ss_dssp SEEEEECCCSSCTTHHHHHHHHHHHHHHHHC----TTCEEEEECCCCCSSCSHHHHHHHHHHHHHHHHTTSSSSCSCCCE
T ss_pred CEEEEEEECCchHHHHHHHHHHHHHHHhhcC----CCCcEEEEEECcccCchhhhhhHHHHhhHHHHHHHHhhcccccCc
Confidence 999999999997 33344444455554433 37999999999999763 3667788889986 678
Q ss_pred ccc
Q 014101 427 VLY 429 (430)
Q Consensus 427 ~~f 429 (430)
+||
T Consensus 150 ~f~ 152 (331)
T 3r7w_B 150 SFY 152 (331)
T ss_dssp EEE
T ss_pred eEE
Confidence 776
No 149
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.76 E-value=1.1e-19 Score=155.40 Aligned_cols=141 Identities=17% Similarity=0.218 Sum_probs=106.6
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHH-HhhhcCCccCCC-cCHHhHHHHHHHHHHcC
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVV-QEKLREGVNERG-LTLAGFLFLHALFIEKG 132 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~-~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~ 132 (430)
+++.|+++|..||+|+||.|+.+||..++.. +|..++.+++..+++.+ + .+++| |+|+||+.++......
T Consensus 2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~~D------~~~~g~i~~~eF~~~~~~~~~~- 73 (148)
T 1m45_A 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRA-IGYNPTNQLVQDIINADSS------LRDASSLTLDQITGLIEVNEKE- 73 (148)
T ss_dssp -CCCCTTCHHHHCTTCCSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHC--C------C--CCEEEHHHHHHHHHHTHHH-
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-hCCCCCHHHHHHHHHHhhC------CCCCCeEcHHHHHHHHHHHHhh-
Confidence 3456889999999999999999999999776 58889999999998877 4 45778 9999999986532100
Q ss_pred CchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC-
Q 014101 133 RLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP- 211 (430)
Q Consensus 133 ~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~- 211 (430)
.. . . .....+.++.+|+.||+|++|.|+.+||+.++...+...
T Consensus 74 --------~~------------~-------~---------~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~ 117 (148)
T 1m45_A 74 --------LD------------A-------T---------TKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLT 117 (148)
T ss_dssp --------HH------------G-------G---------GCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCC
T ss_pred --------cc------------c-------c---------ccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCC
Confidence 00 0 0 000123478999999999999999999999998764322
Q ss_pred -CCCCcccccccccCCcccchhhHHhhhh
Q 014101 212 -WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 212 -~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.....+++.+|.|+||.|+|+||+..+.
T Consensus 118 ~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 118 DAEVDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp HHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 2234577899999999999999998753
No 150
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.75 E-value=9.5e-19 Score=160.54 Aligned_cols=148 Identities=14% Similarity=0.134 Sum_probs=114.0
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhh---cCCccCCC-cCHHhHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKL---REGVNERG-LTLAGFLFL 124 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~---~~d~~~~g-i~~~eFl~~ 124 (430)
..|++++++.++++|..||+|+||.|+.+||..++...+|..++.+++..++..+-... -++.+++| |+|+||+.+
T Consensus 40 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~ 119 (219)
T 3cs1_A 40 REKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEF 119 (219)
T ss_dssp CSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHH
T ss_pred ccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHH
Confidence 46899999999999999999999999999999998876788888888877665431100 00235677 999999987
Q ss_pred HHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhh
Q 014101 125 HALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLF 204 (430)
Q Consensus 125 ~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~ 204 (430)
+..... ....+.++.+|+.||+||+|+|+.+||+.++
T Consensus 120 ~~~~~~-------------------------------------------~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l 156 (219)
T 3cs1_A 120 RLMLCY-------------------------------------------IYDFFELTVMFDEIDASGNMLVDEEEFKRAV 156 (219)
T ss_dssp HHHHHH-------------------------------------------HHHHHHHHHHHHTTCSSSSSEEEHHHHHHHH
T ss_pred HHHHhc-------------------------------------------cchHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 532110 0123458899999999999999999999999
Q ss_pred ccCC---CCCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 205 STAP---ECPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 205 ~~~~---~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
...+ ..+.....+++.+|.|+||.|+|+||+..+.
T Consensus 157 ~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 194 (219)
T 3cs1_A 157 PKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWAS 194 (219)
T ss_dssp HHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred HHhcccCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 7542 2223345677899999999999999998754
No 151
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.75 E-value=7.3e-19 Score=158.80 Aligned_cols=156 Identities=17% Similarity=0.137 Sum_probs=110.9
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...|++++++.|+++|..+|+|+||.|+.+||..+ .. +|..++ +..+++.+ |.+++| |+|+||+.++.
T Consensus 20 ~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~-lg~~~~---~~~l~~~~------D~d~dg~i~~~EF~~~~~ 88 (202)
T 2bec_A 20 ETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GA-LAVNPL---GDRIIESF------FPDGSQRVDFPGFVRVLA 88 (202)
T ss_dssp HHCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HH-HHHSTT---HHHHHHTT------SCSSCCCCCHHHHHHHHG
T ss_pred ccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-Hh-cCCCcc---HHHHHHHh------CCCCCCcCcHHHHHHHHH
Confidence 35689999999999999999999999999999998 44 455444 77777777 678888 99999998864
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
..... ..+ ..| ... ...........+.++.+|+.||.||||+|+.+||+.++..
T Consensus 89 ~~~~~-~~~--------------------~~~--~~~---~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 142 (202)
T 2bec_A 89 HFRPV-EDE--------------------DTE--TQD---PKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL 142 (202)
T ss_dssp GGSCC-CHH--------------------HHC----------CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred Hhccc-chh--------------------ccc--ccc---cccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 21100 000 000 000 0000112234466899999999999999999999999987
Q ss_pred C-CCCC--CCCCccccc----ccccCCcccchhhHHhhhhh
Q 014101 207 A-PECP--WDEAPYKDA----AEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 207 ~-~~~~--~~~~~~~~~----~d~~~dg~i~~~ef~~~w~~ 240 (430)
. +... .....+++. +|.|+||.|+|+||+..+.-
T Consensus 143 ~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 183 (202)
T 2bec_A 143 MVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEK 183 (202)
T ss_dssp SCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTT
T ss_pred hcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 5 3221 112345556 99999999999999988653
No 152
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=99.75 E-value=2.6e-18 Score=150.24 Aligned_cols=131 Identities=17% Similarity=0.184 Sum_probs=95.4
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHH------hhhccccccc
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVA------KLLSNKDSLA 358 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~------~~~~~~~~~~ 358 (430)
.++|+++|++|||||||+++|.+..+.....|+.+.+.....+.+++ ..+.+|||+|.+.+. .+. ..+++
T Consensus 3 ~~~v~lvG~~gvGKStL~~~l~~~~~~~~~~~~~t~~~~~~~~~~~~--~~l~i~Dt~G~~~~~~~~~~~~~~--~~~~~ 78 (165)
T 2wji_A 3 SYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNG--EKFKVVDLPGVYSLTANSIDEIIA--RDYII 78 (165)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHCCSSSCC-----CCCCCEEEEEETT--EEEEEEECCCCSCSSSSSHHHHHH--HHHHH
T ss_pred ccEEEEECCCCCCHHHHHHHHhCCCeeccCCCCcceeeeEEEEEECC--cEEEEEECCCcccCCCcchhHHHH--HHHHh
Confidence 47999999999999999999999876655556666655556666653 578899999987653 222 34444
Q ss_pred --cccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc-CcHHHHHHHHHHhCCccc
Q 014101 359 --ACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA-MAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 359 --~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~-v~~~~~~~~~~~~g~~~f 429 (430)
++|++++|+|+++.+ ....|+..+... ++|+++|+||+|+...+ +. .+++++++.++++++
T Consensus 79 ~~~~~~~i~v~D~~~~~---~~~~~~~~~~~~------~~p~ilv~nK~Dl~~~~~~~-~~~~~~~~~~~~~~~ 142 (165)
T 2wji_A 79 NEKPDLVVNIVDATALE---RNLYLTLQLMEM------GANLLLALNKMDLAKSLGIE-IDVDKLEKILGVKVV 142 (165)
T ss_dssp HHCCSEEEEEEETTCHH---HHHHHHHHHHHT------TCCEEEEEECHHHHHHTTCC-CCHHHHHHHHTSCEE
T ss_pred cCCCCEEEEEecCCchh---HhHHHHHHHHhc------CCCEEEEEEchHhccccChh-hHHHHHHHHhCCCEE
Confidence 799999999998754 345577777653 58999999999997643 33 357889999988765
No 153
>3c5h_A Glucocorticoid receptor DNA-binding factor 1; RAS, GTPase, glucorticoid receptor, structural genomics consortium, SGC, alternative splicing; HET: GNP; 1.80A {Homo sapiens}
Probab=99.74 E-value=2.9e-19 Score=168.10 Aligned_cols=145 Identities=17% Similarity=0.102 Sum_probs=100.8
Q ss_pred hccCceeEEEEeCCC---------CCCHHHHHHHHhC---CCCCCCcCCCc-cceEEEEEE--------------EcCCC
Q 014101 280 QAERNVFQCFVFGPK---------KAGKSVLLNSFLG---RPFSDNYTPTT-DERYAVNVV--------------DQPGG 332 (430)
Q Consensus 280 ~~~~~~~kI~vvG~~---------~vGKSSLi~~l~~---~~~~~~~~~t~-~~~~~~~~v--------------~~~~~ 332 (430)
......+||+|+|.+ |||||||+++|++ ..+...+.+|+ +.++..+.+ .+++.
T Consensus 14 ~~~~~~~ki~lvG~~~~~~~~~~~~vGKSsLi~~l~~~~~~~~~~~~~~t~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 93 (255)
T 3c5h_A 14 LYFQGTYNISVVGLSGTEKEKGQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNNDHFLYWGEVSRSLEDCV 93 (255)
T ss_dssp SSCCSCEEEEEEESCCCTTTTTTCCCSHHHHHHHHHCCSTTTCCSCCCCEECHHHHTSTTTTTCSEEEEEEEC-------
T ss_pred CCCCceeEEEEECCCccccccCCCCcCHHHHHHHHHhccCCccccccCCcccccccceeEeecccccccccccccccCCc
Confidence 344667999999999 9999999999999 55655565654 443322221 13445
Q ss_pred eEEEEEEe-----------------------CCChhHHHhhhccccccc---------------------cccEEEEEEE
Q 014101 333 TKKTVVLR-----------------------EIPEEAVAKLLSNKDSLA---------------------ACDIAVFVHD 368 (430)
Q Consensus 333 ~~~~~i~d-----------------------~~G~e~~~~~~~~~~~~~---------------------~ad~vilv~D 368 (430)
...+.+|| ++|++.+..++ ..+++ ++|++|+|||
T Consensus 94 ~~~l~i~D~~~~~D~~~~~~~~~~~~~~~~~~~g~e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vilV~D 171 (255)
T 3c5h_A 94 ECKMHIVEQTEFIDDQTFQPHRSTALQPYIKRAAATKLASAE--KLMYFCTDQLGLEQDFEQKQMPDGKLLVDGFLLGID 171 (255)
T ss_dssp --CEEEEEECCCEETTTCSBTTGGGCCCHHHHHTCSEEECTT--CBCCCCGGGTTCGGGSCCCBCGGGEEECCEEEEEEE
T ss_pred EEEEEEEEccccccccccccccccccccccccchhhhhhhhh--hhhhhccccccccccccccccccccccCCEEEEEEE
Confidence 56788999 55556566555 45555 7999999999
Q ss_pred CCCh--hhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHH-hCCccc
Q 014101 369 SSDE--SSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTF-LVMVLY 429 (430)
Q Consensus 369 ~t~~--~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~-~g~~~f 429 (430)
++++ .||+.+..|+..+...... .++|++||+||+|+.+.+. .+++.++++. .++++|
T Consensus 172 ~t~~~~~s~~~~~~~l~~i~~~~~~--~~~piilV~NK~Dl~~~~~-v~~~~~~~~~~~~~~~~ 232 (255)
T 3c5h_A 172 VSRGMNRNFDDQLKFVSNLYNQLAK--TKKPIVVVLTKCDEGVERY-IRDAHTFALSKKNLQVV 232 (255)
T ss_dssp CBC----CHHHHHHHHHHHHHHHHH--TTCCEEEEEECGGGBCHHH-HHHHHHHHHTSSSCCEE
T ss_pred CCCCchhhHHHHHHHHHHHHHHhcc--CCCCEEEEEEcccccccHH-HHHHHHHHHhcCCCeEE
Confidence 9998 9999999999988764111 2689999999999976432 2678888877 377665
No 154
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.74 E-value=3.7e-19 Score=158.71 Aligned_cols=140 Identities=19% Similarity=0.204 Sum_probs=110.4
Q ss_pred cHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHh----------cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHh
Q 014101 52 KPRCVRALKRIFILCDHDRDGALSDAELNDFQVKC----------FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAG 120 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~----------~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~e 120 (430)
++++++.|+++|+.+|.|+||.|+.+||..++..+ .|..++.+++..+++.+ |.+++| |+|+|
T Consensus 35 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------D~d~~g~i~~~e 108 (191)
T 3khe_A 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSV------DFDRNGYIEYSE 108 (191)
T ss_dssp CTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHT------CTTCSSSEEHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHh------CCCCCCcCCHHH
Confidence 67778899999999999999999999999998765 24556778888888887 677888 99999
Q ss_pred HHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHH
Q 014101 121 FLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEV 200 (430)
Q Consensus 121 Fl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el 200 (430)
|+.++..... ....+.++.+|+.||.|+||.|+.+||
T Consensus 109 f~~~~~~~~~-------------------------------------------~~~~~~~~~~F~~~D~d~~G~I~~~E~ 145 (191)
T 3khe_A 109 FVTVCMDKQL-------------------------------------------LLSRERLLAAFQQFDSDGSGKITNEEL 145 (191)
T ss_dssp HHHHHSCHHH-------------------------------------------HCCHHHHHHHHHHHCTTCSSEECHHHH
T ss_pred HHHHHHHhcc-------------------------------------------cchHHHHHHHHHHHCCCCcCcCCHHHH
Confidence 9987531100 011245889999999999999999999
Q ss_pred HHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhhh
Q 014101 201 EDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
+.++...+........+++.+|.|+||.|+|+||+..+.-
T Consensus 146 ~~~l~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 185 (191)
T 3khe_A 146 GRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 185 (191)
T ss_dssp HHHTTSSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHccCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9999821111122345778899999999999999998753
No 155
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.74 E-value=1.3e-18 Score=149.63 Aligned_cols=137 Identities=18% Similarity=0.198 Sum_probs=104.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHH
Q 014101 52 KPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIE 130 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~ 130 (430)
|+++++.|+++|+.+|+|+||.|+.+||. .+... |.. .++..+++.+ |.+++| |+|+||+.++....
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~el~-~l~~~-~~~---~~~~~~~~~~------D~~~~g~i~~~ef~~~~~~~~- 68 (155)
T 3ll8_B 1 DADEIKRLGKRFKKLDLDNSGSLSVEEFM-SLPEL-QQN---PLVQRVIDIF------DTDGNGEVDFKEFIEGVSQFS- 68 (155)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSSBCHHHHT-TSGGG-TTC---TTHHHHHHHH------CTTCSSSBCHHHHHHHHGGGC-
T ss_pred CHHHHHHHHHHHHHhCcCCCCeEcHHHHH-Hhhcc-ccc---hHHHHHHHHH------CCCCCCcCcHHHHHHHHHHHc-
Confidence 46789999999999999999999999994 43433 332 3788888888 677888 99999998853100
Q ss_pred cCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC-CC
Q 014101 131 KGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA-PE 209 (430)
Q Consensus 131 ~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~-~~ 209 (430)
. .....+.++.+|+.||+|++|.|+.+||+.++... +.
T Consensus 69 ---------------------------------~--------~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~ 107 (155)
T 3ll8_B 69 ---------------------------------V--------KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 107 (155)
T ss_dssp ---------------------------------S--------SCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGG
T ss_pred ---------------------------------c--------cCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc
Confidence 0 01123568899999999999999999999999762 22
Q ss_pred C-C-CCCCccccc----ccccCCcccchhhHHhhhhhh
Q 014101 210 C-P-WDEAPYKDA----AEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 210 ~-~-~~~~~~~~~----~d~~~dg~i~~~ef~~~w~~~ 241 (430)
. + .....+.+. +|.|+||.|+|+||+..+.-.
T Consensus 108 ~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 145 (155)
T 3ll8_B 108 NLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 145 (155)
T ss_dssp GSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 1 1 122345556 999999999999999987654
No 156
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.74 E-value=2.2e-18 Score=177.70 Aligned_cols=142 Identities=18% Similarity=0.169 Sum_probs=115.0
Q ss_pred CccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc-------CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhH
Q 014101 50 ALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCF-------NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGF 121 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~-------g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eF 121 (430)
-+|++++++|+++|+.||+|+||.|+.+||..++..+. |...++++++.+++.+ |.+++| |+|+||
T Consensus 348 ~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------D~d~dG~I~~~EF 421 (504)
T 3q5i_A 348 LTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEV------DFDKNGYIEYSEF 421 (504)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHH------CTTCSSSEEHHHH
T ss_pred CCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHh------CCCCCCcEeHHHH
Confidence 34899999999999999999999999999999877653 5567889999999999 778889 999999
Q ss_pred HHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHH
Q 014101 122 LFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVE 201 (430)
Q Consensus 122 l~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~ 201 (430)
+.++..... ....+.++++|+.||+||||+||.+||+
T Consensus 422 ~~~~~~~~~-------------------------------------------~~~~~~~~~~F~~~D~d~dG~Is~~El~ 458 (504)
T 3q5i_A 422 ISVCMDKQI-------------------------------------------LFSEERLRRAFNLFDTDKSGKITKEELA 458 (504)
T ss_dssp HHHHSCHHH-------------------------------------------HTCHHHHHHHHHHHCTTCCSEECHHHHH
T ss_pred HHHHHhhhc-------------------------------------------ccCHHHHHHHHHHhcCCCCCcCcHHHHH
Confidence 987531100 0112458899999999999999999999
Q ss_pred HhhccCCCCCCCCCcccccccccCCcccchhhHHhhhhh
Q 014101 202 DLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
.++...+......+.+++.+|.|+||.|+|+||+..+.-
T Consensus 459 ~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 497 (504)
T 3q5i_A 459 NLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHK 497 (504)
T ss_dssp HHTTCSCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHH
T ss_pred HHHhhCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 999763222122346788999999999999999987653
No 157
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.72 E-value=1e-17 Score=171.84 Aligned_cols=140 Identities=16% Similarity=0.203 Sum_probs=100.3
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHh---cCCCCC----------HHHHHHHHHHHHhhhcCCccCCC-c
Q 014101 51 LKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKC---FNSPLQ----------PSEIVGVKRVVQEKLREGVNERG-L 116 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~---~g~~~~----------~~e~~~i~~~~~~~~~~d~~~~g-i 116 (430)
+++++++.++++|+.||+|+||.|+.+||..++..+ +|...+ ++++..+++.+ |.|++| |
T Consensus 325 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------D~d~dG~I 398 (486)
T 3mwu_A 325 TTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLL------DMDGSGSI 398 (486)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHH------CTTCCSSB
T ss_pred ccHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHh------cCCCCCcC
Confidence 478899999999999999999999999997665433 466555 88899999998 788899 9
Q ss_pred CHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCC
Q 014101 117 TLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLR 196 (430)
Q Consensus 117 ~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is 196 (430)
+|+||+.++.. .. . ....+.++++|+.||+||||.|+
T Consensus 399 ~~~Ef~~~~~~----------------------------------~~------~---~~~~~~~~~~F~~~D~d~dG~Is 435 (486)
T 3mwu_A 399 EYSEFIASAID----------------------------------RT------I---LLSRERMERAFKMFDKDGSGKIS 435 (486)
T ss_dssp CHHHHHHHHSC----------------------------------TT------T---TCCHHHHHHHHHHHCSSCSSSBC
T ss_pred cHHHHHHHHHh----------------------------------hh------c---cchHHHHHHHHHHhCCCCCCcCC
Confidence 99999887420 00 0 00124588999999999999999
Q ss_pred HHHHHHhhccCCC--CCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 197 PIEVEDLFSTAPE--CPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 197 ~~el~~~~~~~~~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+||+.++...+. .....+.+++.+|.|+||.|+|+||+..+.
T Consensus 436 ~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~ 480 (486)
T 3mwu_A 436 TKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480 (486)
T ss_dssp SSCC--------------------CCCCSSCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 9999999987542 224446688899999999999999998754
No 158
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.72 E-value=4.4e-18 Score=174.95 Aligned_cols=141 Identities=18% Similarity=0.189 Sum_probs=112.3
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcC-------CCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHH
Q 014101 51 LKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFN-------SPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFL 122 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g-------~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl 122 (430)
+|++++++++++|+.||+|+||.|+.+||..++...++ ...+.+++..+++.+ |.+++| |+|+||+
T Consensus 340 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------D~d~~G~I~~~EF~ 413 (494)
T 3lij_A 340 TSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAA------DFDRNGYIDYSEFV 413 (494)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHH------CTTCSSSEEHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHh------CCCCCCcCcHHHHH
Confidence 48999999999999999999999999999999887643 245588899999998 778889 9999999
Q ss_pred HHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHH
Q 014101 123 FLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVED 202 (430)
Q Consensus 123 ~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~ 202 (430)
.++..... ....+.++.+|+.||+||||+|+.+||+.
T Consensus 414 ~~~~~~~~-------------------------------------------~~~~~~~~~~F~~~D~d~~G~Is~~El~~ 450 (494)
T 3lij_A 414 TVAMDRKS-------------------------------------------LLSKDKLESAFQKFDQDGNGKISVDELAS 450 (494)
T ss_dssp HHHSCHHH-------------------------------------------HTCHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred HHHHhhhc-------------------------------------------cccHHHHHHHHHHHCCCCCCcCCHHHHHH
Confidence 87531100 01124588999999999999999999999
Q ss_pred hhccCCCCCCCCCcccccccccCCcccchhhHHhhhhh
Q 014101 203 LFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
++...+........+++.+|.|+||.|+|+||+..+.-
T Consensus 451 ~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 488 (494)
T 3lij_A 451 VFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQK 488 (494)
T ss_dssp HC-CCSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 99752222222346778999999999999999987653
No 159
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=99.72 E-value=3.2e-18 Score=156.38 Aligned_cols=136 Identities=19% Similarity=0.213 Sum_probs=102.3
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCC---cCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDN---YTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAA 359 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~---~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ 359 (430)
...++|+++|++|||||||+++|.+..+... +.++.+..+ ....+.+||++|++.+...+ ..+++.
T Consensus 10 ~~~~~i~~~G~~g~GKTsl~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~Dt~G~~~~~~~~--~~~~~~ 78 (218)
T 1nrj_B 10 SYQPSIIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADY---------DGSGVTLVDFPGHVKLRYKL--SDYLKT 78 (218)
T ss_dssp CCCCEEEEECSTTSSHHHHHHHHHHSSCCCBCCCSSCEEETTG---------GGSSCEEEECCCCGGGTHHH--HHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhcCCCCCeeeecCceEEEEe---------eCceEEEEECCCcHHHHHHH--HHHHHh
Confidence 4568999999999999999999998876542 333433322 33457899999999887776 566666
Q ss_pred ----ccEEEEEEECC-ChhhHHHHHHHHHHHHhcCCC-CCCCCcEEEEEeCCCCCCccC-c------HHHHHHHHHHhCC
Q 014101 360 ----CDIAVFVHDSS-DESSWKRATELLVEVASYGED-TGFEVPCLIVAAKDDLDSFAM-A------IQDSTRVFTFLVM 426 (430)
Q Consensus 360 ----ad~vilv~D~t-~~~S~~~~~~~l~~l~~~~~~-~~~~~PiilVgnK~Dl~~~~v-~------~~~~~~~~~~~g~ 426 (430)
+|++++|||++ ++++|..+..|+..+...... ...++|+++|+||+|+..... . .+++.+++...++
T Consensus 79 ~~~~~~~~i~v~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~l~~~~~~~~~~~~~ 158 (218)
T 1nrj_B 79 RAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSELFTARPPSKIKDALESEIQKVIERRKK 158 (218)
T ss_dssp HGGGEEEEEEEEETTSCTTCCHHHHHHHHHHHHHHHHHSTTCCCEEEEEECTTSTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEEEEECCCChHHHHHHHHHHHHHHhcccccccCCCCEEEEEEchHhcccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 89999999999 889999999999887764210 012799999999999987542 2 4567777776665
Q ss_pred ccc
Q 014101 427 VLY 429 (430)
Q Consensus 427 ~~f 429 (430)
+|+
T Consensus 159 ~~~ 161 (218)
T 1nrj_B 159 SLN 161 (218)
T ss_dssp HHH
T ss_pred ccc
Confidence 544
No 160
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.72 E-value=6.7e-18 Score=169.25 Aligned_cols=143 Identities=17% Similarity=0.297 Sum_probs=115.7
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...+++++++.|+++|+.||+|+||.|+.+||..++.. +|..++.+++..+++.+ |.+++| |+|+||+.++.
T Consensus 303 ~~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~-lg~~~s~eel~~Lf~~~------D~DgdG~IsfeEFl~ll~ 375 (450)
T 3sg6_A 303 RDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEV------DADGNGTIDFPEFLTMMA 375 (450)
T ss_dssp --CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHTT------CTTSSSSEEHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHh------ccCCCCcccHHHHHHHHH
Confidence 45789999999999999999999999999999999876 58889999999999988 678888 99999999864
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
.... .....+.++.+|+.||+|+||+|+.+||+.++..
T Consensus 376 ~~~~------------------------------------------~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~ 413 (450)
T 3sg6_A 376 RKMK------------------------------------------DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN 413 (450)
T ss_dssp C------------------------------------------------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred hhcc------------------------------------------ccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 2110 0112345889999999999999999999999986
Q ss_pred CCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 207 APECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 207 ~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+... .....++..+|.|+||.|+|+||++.+.
T Consensus 414 lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 414 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp HTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 53221 2224567889999999999999998753
No 161
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.72 E-value=2.6e-18 Score=145.42 Aligned_cols=132 Identities=14% Similarity=0.105 Sum_probs=102.1
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCc
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRL 134 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~ 134 (430)
++.|+++|..+|+|+||.|+.+||..++.. +|..++.+++..++. +++| |+|+||+.++....
T Consensus 4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~----------~~~g~i~~~eF~~~~~~~~----- 67 (140)
T 1ggw_A 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRA-CGQNPTLAEITEIES----------TLPAEVDMEQFLQVLNRPN----- 67 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHHHH-TSCCCCHHHHHHHHT----------TSCSSEEHHHHHHHHCTTS-----
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHh----------CCCCcCcHHHHHHHHHHHh-----
Confidence 457899999999999999999999999776 588889888877765 4567 99999998753100
Q ss_pred hhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--C
Q 014101 135 ETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--W 212 (430)
Q Consensus 135 ~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~ 212 (430)
. ..++...+.++.+|+.||+|++|+|+.+||+.++...+... .
T Consensus 68 ----------------------------~-------~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~ 112 (140)
T 1ggw_A 68 ----------------------------G-------FDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNE 112 (140)
T ss_dssp ----------------------------S-------SSSSCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHH
T ss_pred ----------------------------c-------ccCcccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHH
Confidence 0 00111234588999999999999999999999998643211 2
Q ss_pred CCCcccccccccCCcccchhhHHhhhh
Q 014101 213 DEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 213 ~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
....+++.+|. +||.|+|+||+..+.
T Consensus 113 ~~~~~~~~~d~-~dg~i~~~eF~~~~~ 138 (140)
T 1ggw_A 113 EMDELLKGVPV-KDGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred HHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence 23457788999 999999999998753
No 162
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=99.72 E-value=5.2e-18 Score=151.74 Aligned_cols=130 Identities=18% Similarity=0.201 Sum_probs=91.6
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCC---cCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDN---YTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAA 359 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~---~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ 359 (430)
...++|+|+|++|||||||++++.+..+... ..++.+.++ ....+.+||++|.+.+...+ ..+++.
T Consensus 46 ~~~~~i~vvG~~g~GKSsll~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~Dt~G~~~~~~~~--~~~~~~ 114 (193)
T 2ged_A 46 SYQPSIIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADY---------DGSGVTLVDFPGHVKLRYKL--SDYLKT 114 (193)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHHSSCC------------CC---------CCTTCSEEEETTCCBSSCCH--HHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhcCCCCcccccCCCceeeee---------cCCeEEEEECCCCchHHHHH--HHHHHh
Confidence 4568999999999999999999998876542 223332222 23456789999987776555 344444
Q ss_pred ----ccEEEEEEECC-ChhhHHHHHHHHHHHHhcCCC-CCCCCcEEEEEeCCCCCCccCcHHHHHHHHHH
Q 014101 360 ----CDIAVFVHDSS-DESSWKRATELLVEVASYGED-TGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTF 423 (430)
Q Consensus 360 ----ad~vilv~D~t-~~~S~~~~~~~l~~l~~~~~~-~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~ 423 (430)
+|++++|||++ +++++..+..|+..+...... ...++|+++|+||+|+.+.....+..+.+.++
T Consensus 115 ~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~l~~~ 184 (193)
T 2ged_A 115 RAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSELFTARPPSKIKDALESE 184 (193)
T ss_dssp HGGGEEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEEEECTTSTTCCCHHHHHHHHHHH
T ss_pred hcccCCEEEEEEECCCCchhHHHHHHHHHHHHhhhhhccccCCCEEEEEEchHhcCCCCHHHHHHHHHHH
Confidence 89999999999 899999999998887654211 11268999999999998865444455555444
No 163
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.71 E-value=4.4e-18 Score=142.04 Aligned_cols=132 Identities=21% Similarity=0.207 Sum_probs=105.5
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
+++++|..+|+|+||.|+.+|+..++.. +|..++.+++..+++.+ |.+++| |+++||+.++..
T Consensus 1 ~l~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~------D~~~~g~i~~~ef~~~~~~--------- 64 (134)
T 1jfj_A 1 MAEALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSI------DADGNGEIDQNEFAKFYGS--------- 64 (134)
T ss_dssp CHHHHHHHHCTTCSSEEEHHHHHHHHHT-TCCSSHHHHHHHHHHHH------CSSCCSEEEHHHHHHHTTC---------
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHH------cCCCCCeEcHHHHHHHHHH---------
Confidence 3789999999999999999999998765 57888999999999998 678889 999999987420
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCCc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAP 216 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~~ 216 (430)
+.. . ......+.++.+|+.+|.|++|.|+.+||+.++...+... ...
T Consensus 65 -------------------------~~~---~---~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~--~~~ 111 (134)
T 1jfj_A 65 -------------------------IQG---Q---DLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEK--VAE 111 (134)
T ss_dssp -------------------------SSC---C---SSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHH--HHH
T ss_pred -------------------------hcc---c---ccCCCHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCHHH--HHH
Confidence 000 0 0012233488999999999999999999999998653321 345
Q ss_pred ccccccccCCcccchhhHHhhh
Q 014101 217 YKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 217 ~~~~~d~~~dg~i~~~ef~~~w 238 (430)
+++.+|.|+||.|+++||+..+
T Consensus 112 ~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 112 QVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHhCCCCCCcEeHHHHHHHh
Confidence 6788999999999999998763
No 164
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.71 E-value=2.5e-17 Score=160.15 Aligned_cols=175 Identities=13% Similarity=0.092 Sum_probs=122.6
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhc-------------------
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLR------------------- 108 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~------------------- 108 (430)
...|+++++..|+++|..||+|+||.|+.+||..++.. +|..++..++..++..++.+..
T Consensus 113 ~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~-lg~~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~~~~~~l~ 191 (323)
T 1ij5_A 113 KPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK-YADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALV 191 (323)
T ss_dssp CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHH-HHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSC
T ss_pred HHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHhhhhHHHHHH
Confidence 35789999999999999999999999999999999876 4788899999999998853311
Q ss_pred -----CCccCCC-cCHHhHHHHHHHHHHcCCchhHHH-HHHhhcCCCCcccccccC-CCCcccCCCCCccccCHHHHHHH
Q 014101 109 -----EGVNERG-LTLAGFLFLHALFIEKGRLETTWT-VLRKFGYNNDIKLADELI-PYSAFKRAPDQSVELTNEAIDFL 180 (430)
Q Consensus 109 -----~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~-~l~~~~y~~~l~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~l 180 (430)
-|.+++| |+.+||..++ .-.....+.+-. +++.++.|+++.|+-+.+ . .+ .....+
T Consensus 192 ~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~------------~l--~~~~~l 255 (323)
T 1ij5_A 192 ADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVH------------LG--LCLLVL 255 (323)
T ss_dssp CCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHH------------HH--HHHHHH
T ss_pred HHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHH------------HH--HHHHHH
Confidence 0334444 5555555443 111222333444 555555555555543222 1 00 001137
Q ss_pred HHHHHHhcCCCCCCCCHHHHHHhh-ccCCC--CCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 181 KGIFELFDADDDNSLRPIEVEDLF-STAPE--CPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 181 ~~~F~~fD~d~dG~is~~el~~~~-~~~~~--~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
..+|+.||.||+|+||.+||..++ ...+. .+.....++..+|.|+||.|+|+||+..+.
T Consensus 256 ~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~ 317 (323)
T 1ij5_A 256 RILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL 317 (323)
T ss_dssp HHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 789999999999999999999999 66542 222334677889999999999999998754
No 165
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=99.71 E-value=1.8e-17 Score=161.58 Aligned_cols=120 Identities=20% Similarity=0.218 Sum_probs=94.6
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
+..+||+|+|.+|||||||+++|.++.+.... ||.+..+ ..+... ...+.+|||+|++.+..++ ..+++.+|+
T Consensus 163 ~~~~kI~ivG~~~vGKSsLl~~l~~~~~~~~~-pT~~~~~--~~~~~~--~~~l~i~Dt~G~~~~~~~~--~~~~~~ad~ 235 (329)
T 3o47_A 163 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNV--ETVEYK--NISFTVWDVGGQDKIRPLW--RHYFQNTQG 235 (329)
T ss_dssp CCSEEEEEEESTTSSHHHHHHHTCSSCCEEEE-EETTEEE--EEEEET--TEEEEEEECC-----CCSH--HHHHTTEEE
T ss_pred cCcceEEEECCCCccHHHHHHHHhCCCCCCcc-cccceEE--EEEecC--cEEEEEEECCCCHhHHHHH--HHHhccCCE
Confidence 45689999999999999999999999876554 6666544 344444 4778899999999998887 778899999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA 411 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~ 411 (430)
+|+|||++++.+|..+..|+..+...... .++|++||+||+|+.+..
T Consensus 236 vilV~D~~~~~s~~~~~~~~~~~~~~~~~--~~~piilV~NK~Dl~~~~ 282 (329)
T 3o47_A 236 LIFVVDSNDRERVNEAREELMRMLAEDEL--RDAVLLVFANKQDLPNAM 282 (329)
T ss_dssp EEEEEETTCSSSHHHHHHHHHHHHTCGGG--TTCEEEEEEECTTSTTCC
T ss_pred EEEEEECCchHHHHHHHHHHHHHHhhhcc--CCCeEEEEEECccCCccc
Confidence 99999999999999999998888765422 378999999999998743
No 166
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=99.71 E-value=1.4e-17 Score=148.23 Aligned_cols=133 Identities=17% Similarity=0.168 Sum_probs=102.2
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHH------hhhcccccc
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVA------KLLSNKDSL 357 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~------~~~~~~~~~ 357 (430)
..+||+++|++|||||||+++|++..+.....|+.+.+.....+...+ ..+.+||++|.+.+. .+. ..++
T Consensus 6 ~~~~i~lvG~~gvGKStL~~~l~~~~~~~~~~~~~t~~~~~~~~~~~~--~~~~l~Dt~G~~~~~~~~~~~~~~--~~~~ 81 (188)
T 2wjg_A 6 KSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNG--EKFKVVDLPGVYSLTANSIDEIIA--RDYI 81 (188)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHTTCEEEEECTTSCCEEEEEEEEETT--EEEEEEECCCCSCCSSSSHHHHHH--HHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCccccCCCCeeccceEEEEEeCC--cEEEEEECCCcCccccccHHHHHH--HHHH
Confidence 458999999999999999999999876655567777666666777663 678899999987653 223 3444
Q ss_pred c--cccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 358 A--ACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 358 ~--~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
+ .+|++++|+|+++ ++....|+..+... ++|+++|+||+|+...+....+++++++.++++++
T Consensus 82 ~~~~~~~~i~v~d~~~---~~~~~~~~~~~~~~------~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~ 146 (188)
T 2wjg_A 82 INEKPDLVVNIVDATA---LERNLYLTLQLMEM------GANLLLALNKMDLAKSLGIEIDVDKLEKILGVKVV 146 (188)
T ss_dssp HHHCCSEEEEEEEGGG---HHHHHHHHHHHHTT------TCCEEEEEECHHHHHHTTCCCCHHHHHHHHTSCEE
T ss_pred hccCCCEEEEEecchh---HHHHHHHHHHHHhc------CCCEEEEEEhhhccccccchHHHHHHHHHhCCCeE
Confidence 3 5999999999874 66677788777652 68999999999997654223567889998888765
No 167
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.70 E-value=1.2e-17 Score=171.17 Aligned_cols=140 Identities=19% Similarity=0.217 Sum_probs=110.1
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHh---cCCCCC-------HHHHHHHHHHHHhhhcCCccCCC-cCHH
Q 014101 51 LKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKC---FNSPLQ-------PSEIVGVKRVVQEKLREGVNERG-LTLA 119 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~---~g~~~~-------~~e~~~i~~~~~~~~~~d~~~~g-i~~~ 119 (430)
+++++++.++++|..||+|+||.|+.+||..++..+ +|..++ ++++..+++.+ |.+++| |+|+
T Consensus 329 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------D~d~~g~i~~~ 402 (484)
T 3nyv_A 329 TSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV------DFDKNGYIEYS 402 (484)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHH------TCCTTSEEEHH
T ss_pred CcHHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHh------CCCCCCeEeHH
Confidence 478889999999999999999999999996665443 466666 78888999888 688899 9999
Q ss_pred hHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHH
Q 014101 120 GFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIE 199 (430)
Q Consensus 120 eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~e 199 (430)
||+.++..... ....+.++++|+.||+||||+|+.+|
T Consensus 403 Ef~~~~~~~~~-------------------------------------------~~~~~~~~~~F~~~D~d~dG~I~~~E 439 (484)
T 3nyv_A 403 EFVTVAMDRKT-------------------------------------------LLSRERLERAFRMFDSDNSGKISSTE 439 (484)
T ss_dssp HHHHHHHHHHH-------------------------------------------HHHHHHHHHHHHHHCTTCCSEEEHHH
T ss_pred HHHHHHHhccc-------------------------------------------cCcHHHHHHHHHHHCCCCCCcCCHHH
Confidence 99988643210 11234588999999999999999999
Q ss_pred HHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 200 VEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 200 l~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
|+.++...+........+++.+|.|+||.|+|+||+....
T Consensus 440 l~~~l~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 479 (484)
T 3nyv_A 440 LATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479 (484)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence 9999976222112234577899999999999999998753
No 168
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.70 E-value=9.4e-18 Score=152.34 Aligned_cols=155 Identities=14% Similarity=0.117 Sum_probs=107.4
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...|++++++.|+++|..+|+|+||.|+.+||..++ . +|..++. +.+++.+ |.+++| |+|+||+.++.
T Consensus 20 ~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~-lg~~~~~---~~l~~~~------d~~~~g~i~~~EF~~~~~ 88 (208)
T 2ct9_A 20 ETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-E-LAINPLG---DRIINAF------FSEGEDQVNFRGFMRTLA 88 (208)
T ss_dssp HHCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-H-HHTSTTH---HHHHHTT------SCTTCSCEEHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-H-cCCCCcH---HHHHHHH------cCCCCCcCcHHHHHHHHH
Confidence 346899999999999999999999999999999863 4 3554443 3456665 677888 99999998864
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
...... ...-|.. + .. ........+.++.+|+.||+||||+|+.+||+.++..
T Consensus 89 ~~~~~~-~~~~~~~-----------------~-------~~--~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 141 (208)
T 2ct9_A 89 HFRPIE-DNEKSKD-----------------V-------NG--PEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRM 141 (208)
T ss_dssp TTSCCC--------------------------------------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred hhcccc-chhhhcc-----------------c-------cc--ccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHH
Confidence 211000 0000100 0 00 0000123456899999999999999999999999986
Q ss_pred C-CCCC--CCCCcc----cccccccCCcccchhhHHhhhhh
Q 014101 207 A-PECP--WDEAPY----KDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 207 ~-~~~~--~~~~~~----~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
. +... .....+ ++.+|.|+||.|+|+||+..+.-
T Consensus 142 ~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~ 182 (208)
T 2ct9_A 142 MVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK 182 (208)
T ss_dssp HSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTT
T ss_pred HhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 3 3221 111233 77899999999999999988654
No 169
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=99.70 E-value=7.4e-17 Score=141.89 Aligned_cols=113 Identities=17% Similarity=0.190 Sum_probs=90.3
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
+..++|+++|++|||||||+++|++..+...+.++.+.++....+.+++ ..+.+||++|++.+..++ ..++..+|+
T Consensus 6 ~~~~~i~v~G~~~~GKssl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~Dt~G~~~~~~~~--~~~~~~~d~ 81 (178)
T 2lkc_A 6 ERPPVVTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVND--KKITFLDTPGHEAFTTMR--ARGAQVTDI 81 (178)
T ss_dssp CCCCEEEEESCTTTTHHHHHHHHHTTCSSCSSCCSSSTTCCCCEEEETT--EEEEESCCCSSSSSSCSC--CSSCCCCCE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCccccCCCCceeEeeeEEEEEeCC--ceEEEEECCCCHHHHHHH--HHHHhhCCE
Confidence 4568999999999999999999999998877767777666666677664 456799999999888877 678899999
Q ss_pred EEEEEECCCh---hhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC
Q 014101 363 AVFVHDSSDE---SSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDS 409 (430)
Q Consensus 363 vilv~D~t~~---~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~ 409 (430)
+++|||++++ .+++.+ ..+.. .++|+++|+||+|+.+
T Consensus 82 ~i~v~d~~~~~~~~~~~~l----~~~~~------~~~p~ilv~nK~Dl~~ 121 (178)
T 2lkc_A 82 VILVVAADDGVMPQTVEAI----NHAKA------ANVPIIVAINKMDKPE 121 (178)
T ss_dssp EEEEEETTCCCCHHHHHHH----HHHGG------GSCCEEEEEETTTSSC
T ss_pred EEEEEECCCCCcHHHHHHH----HHHHh------CCCCEEEEEECccCCc
Confidence 9999999883 444333 22222 1689999999999986
No 170
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=99.70 E-value=1.1e-16 Score=147.62 Aligned_cols=138 Identities=13% Similarity=0.099 Sum_probs=96.0
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCCh------hH----HHhhhc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPE------EA----VAKLLS 352 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~------e~----~~~~~~ 352 (430)
...+||+|+|.+|||||||+++|++..+.....+..+.......+... ...+.+|||+|. +. +..+
T Consensus 27 ~~~~kI~vvG~~~vGKSsLin~l~~~~~~~~~~~~~t~~~~~~~~~~~--~~~~~l~DtpG~~~~~~~~~~~~~~~~~-- 102 (228)
T 2qu8_A 27 PHKKTIILSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHFDHK--LNKYQIIDTPGLLDRAFENRNTIEMTTI-- 102 (228)
T ss_dssp TTSEEEEEECSTTSSHHHHHHHHTTTCEEEECC-----CEEEEEEEET--TEEEEEEECTTTTTSCGGGCCHHHHHHH--
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCccCCCCCcceeeeeeeeecC--CCeEEEEECCCCcCcccchhhhHHHHHH--
Confidence 456899999999999999999999988764433444444444444444 367889999998 33 3322
Q ss_pred cccccccccEEEEEEECCChhhHH--HHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc-CcH---HHHHHHHHHhC-
Q 014101 353 NKDSLAACDIAVFVHDSSDESSWK--RATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA-MAI---QDSTRVFTFLV- 425 (430)
Q Consensus 353 ~~~~~~~ad~vilv~D~t~~~S~~--~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~-v~~---~~~~~~~~~~g- 425 (430)
..++..+|++++|||++++.+|. ....|+..+.... +++|+++|+||+|+.+.+ +.. ..+.++++..+
T Consensus 103 -~~~~~~~d~~i~v~d~~~~~s~~~~~~~~~~~~l~~~~----~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 177 (228)
T 2qu8_A 103 -TALAHINGVILFIIDISEQCGLTIKEQINLFYSIKSVF----SNKSIVIGFNKIDKCNMDSLSIDNKLLIKQILDNVKN 177 (228)
T ss_dssp -HHHHTSSEEEEEEEETTCTTSSCHHHHHHHHHHHHTCC-----CCCEEEEEECGGGCC--CCCHHHHHHHHHHHHHCCS
T ss_pred -HHhhccccEEEEEEecccccCcchHHHHHHHHHHHHhh----cCCcEEEEEeCcccCCchhhHHHHHHHHHHHHHhcCC
Confidence 23467889999999999988875 3345777766542 268999999999997753 433 35777887776
Q ss_pred -Cccc
Q 014101 426 -MVLY 429 (430)
Q Consensus 426 -~~~f 429 (430)
+++|
T Consensus 178 ~~~~~ 182 (228)
T 2qu8_A 178 PIKFS 182 (228)
T ss_dssp CEEEE
T ss_pred CceEE
Confidence 5554
No 171
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.70 E-value=5.7e-17 Score=141.72 Aligned_cols=123 Identities=15% Similarity=0.217 Sum_probs=100.0
Q ss_pred HHHHhhcCCCCCccCHHHHHHHHHHhcCC-----CCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCc
Q 014101 61 RIFILCDHDRDGALSDAELNDFQVKCFNS-----PLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRL 134 (430)
Q Consensus 61 ~~F~~~D~d~dG~is~~El~~~~~~~~g~-----~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~ 134 (430)
++|..+|+|+||.|+.+||..++..+ |. +++.+++..+++.+ |.+++| |+|+||+.++..
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~l-g~~~~~~~~~~~~~~~l~~~~------D~~~~g~i~~~eF~~~~~~------- 70 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQS-GIAGGYKPFNLETCRLMVSML------DRDMSGTMGFNEFKELWAV------- 70 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHHH-TCSTTSCCCCHHHHHHHHHHH------CTTCCSCBCHHHHHHHHHH-------
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHhh-cccCCCCCcCHHHHHHHHHHH------CCCCCCcCCHHHHHHHHHH-------
Confidence 56999999999999999999998775 44 78999999999998 677888 999999998641
Q ss_pred hhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--C
Q 014101 135 ETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--W 212 (430)
Q Consensus 135 ~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~ 212 (430)
.+.++.+|+.||+|++|.|+.+||+.++...+..+ .
T Consensus 71 ------------------------------------------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~ 108 (167)
T 1gjy_A 71 ------------------------------------------LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQ 108 (167)
T ss_dssp ------------------------------------------HHHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHH
T ss_pred ------------------------------------------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHH
Confidence 13478899999999999999999999998754322 2
Q ss_pred CCCcccccccccCCcccchhhHHhhhhhh
Q 014101 213 DEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 213 ~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
....+++.+ |+||.|+|+||+..+...
T Consensus 109 ~~~~~~~~~--d~dg~i~~~eF~~~~~~~ 135 (167)
T 1gjy_A 109 TVNSIAKRY--STSGKITFDDYIACCVKL 135 (167)
T ss_dssp HHHHHHHHT--CBTTBEEHHHHHHHHHHH
T ss_pred HHHHHHHHh--CcCCcCcHHHHHHHHHHH
Confidence 223455555 899999999999886543
No 172
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=99.70 E-value=4.1e-17 Score=145.15 Aligned_cols=131 Identities=10% Similarity=0.080 Sum_probs=98.1
Q ss_pred eEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCC-----------hhHHHhhhccc
Q 014101 286 FQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIP-----------EEAVAKLLSNK 354 (430)
Q Consensus 286 ~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G-----------~e~~~~~~~~~ 354 (430)
+||+++|++|||||||++++++..+...+.|+.+... ..+.+. .+.+||++| ++.+...+ .
T Consensus 2 ~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~t~~~--~~~~~~----~~~l~Dt~G~~~~~~~~~~~~~~~~~~~--~ 73 (190)
T 2cxx_A 2 ATIIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKI--IEIEWK----NHKIIDMPGFGFMMGLPKEVQERIKDEI--V 73 (190)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHSCCCSSSSSTTCTTSC--EEEEET----TEEEEECCCBSCCTTSCHHHHHHHHHHH--H
T ss_pred cEEEEECCCCCCHHHHHHHHhCcCCccCCCCCcccee--EEEecC----CEEEEECCCccccccCCHHHHHHHHHHH--H
Confidence 6999999999999999999999988777666555433 333333 467899999 77777776 5
Q ss_pred ccccc-ccEEEEEEECCChhhHHHH-HHHHHH--------HHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHh
Q 014101 355 DSLAA-CDIAVFVHDSSDESSWKRA-TELLVE--------VASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFL 424 (430)
Q Consensus 355 ~~~~~-ad~vilv~D~t~~~S~~~~-~~~l~~--------l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~ 424 (430)
.+++. ++++++||++.+..++..+ ..|... +...... .++|+++|+||+|+.... .++++++++++
T Consensus 74 ~~~~~~~~~~~~v~~v~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~piilv~nK~Dl~~~~--~~~~~~~~~~~ 149 (190)
T 2cxx_A 74 HFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRE--LDIPTIVAVNKLDKIKNV--QEVINFLAEKF 149 (190)
T ss_dssp HHHHHHGGGCCEEEEEEETTHHHHHHHHHHHTTCCCHHHHHHHHHHH--TTCCEEEEEECGGGCSCH--HHHHHHHHHHH
T ss_pred HHHHhhhccCCEEEEEEcchhhhhHHHhhhccCccHHHHHHHHHHHh--cCCceEEEeehHhccCcH--HHHHHHHHHHh
Confidence 67776 8888888888888888876 556542 2111100 268999999999998754 67789999999
Q ss_pred CCcc
Q 014101 425 VMVL 428 (430)
Q Consensus 425 g~~~ 428 (430)
++++
T Consensus 150 ~~~~ 153 (190)
T 2cxx_A 150 EVPL 153 (190)
T ss_dssp TCCG
T ss_pred hhhh
Confidence 9864
No 173
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.69 E-value=8.3e-18 Score=151.50 Aligned_cols=132 Identities=14% Similarity=0.215 Sum_probs=106.5
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCC-----CCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 51 LKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNS-----PLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~-----~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
.++.++++|++ |..+|+|+||.|+.+||..+++.+ |. +++.+++..+++.+ |.+++| |+|+||+.+
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~l-g~~~~~~~~~~~~~~~l~~~~------D~d~~g~i~~~eF~~~ 98 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQS-GIAGGYKPFNLETCRLMVSML------DRDMSGTMGFNEFKEL 98 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHH-TTTCSSCCCCHHHHHHHHHHH------CTTCSSCEEHHHHHHH
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHh------CCCCCCeECHHHHHHH
Confidence 56667889999 999999999999999999998775 43 68999999999998 677888 999999998
Q ss_pred HHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhh
Q 014101 125 HALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLF 204 (430)
Q Consensus 125 ~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~ 204 (430)
+.. .+.++++|+.||+|++|.|+.+||+.++
T Consensus 99 ~~~-------------------------------------------------~~~~~~~F~~~D~d~~G~I~~~el~~~l 129 (198)
T 1juo_A 99 WAV-------------------------------------------------LNGWRQHFISFDTDRSGTVDPQELQKAL 129 (198)
T ss_dssp HHH-------------------------------------------------HHHHHHHHHTTCTTCCSEECHHHHHHHH
T ss_pred HHH-------------------------------------------------HHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 641 1347789999999999999999999999
Q ss_pred ccCCCCC--CCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 205 STAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 205 ~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
...+... .....+++.+ |+||.|+|+||+..+...
T Consensus 130 ~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~ 166 (198)
T 1juo_A 130 TTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL 166 (198)
T ss_dssp HHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH
T ss_pred HHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence 8654322 1223455555 899999999999886543
No 174
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.69 E-value=1.4e-16 Score=163.90 Aligned_cols=119 Identities=20% Similarity=0.193 Sum_probs=100.0
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDI 362 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~ 362 (430)
...+||+|+|.+|||||||+++|+++.+... .||.+..+ ..+... ...+.+|||+|++.+..++ ..+++.+|+
T Consensus 320 ~~~~ki~lvG~~nvGKSsLl~~l~~~~~~~~-~~T~~~~~--~~~~~~--~~~~~l~Dt~G~~~~~~~~--~~~~~~ad~ 392 (497)
T 3lvq_E 320 NKEMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVGFNV--ETVTYK--NVKFNVWDVGGQDKIRPLW--RHYYTGTQG 392 (497)
T ss_dssp CCEEEEEEECSTTSSHHHHHHHHHHSSCCCC-CCCSSEEE--EEEESS--SCEEEEEEECCCGGGSGGG--GGGGTTCCE
T ss_pred ccceeEEEEcCCCCCHHHHHHHHhcCCCCCc-CCccceeE--EEEEeC--CEEEEEEECCCcHHHHHHH--HHHhccCCE
Confidence 4568999999999999999999999886544 36776554 445555 3678899999999999887 789999999
Q ss_pred EEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 363 AVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 363 vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+|+|||++++++|..+..|+..+...... .++|+|||+||+|+.+.
T Consensus 393 ~i~V~D~~~~~s~~~~~~~~~~~~~~~~~--~~~p~ilv~NK~Dl~~~ 438 (497)
T 3lvq_E 393 LIFVVDCADRDRIDEARQELHRIINDREM--RDAIILIFANKQDLPDA 438 (497)
T ss_dssp EEEEEETTCGGGHHHHHHHHHHHHTSGGG--TTCEEEEEEECCSSSSC
T ss_pred EEEEEECcchhHHHHHHHHHHHHhhhhhc--CCCcEEEEEECCCCCcC
Confidence 99999999999999999999998765322 26999999999999773
No 175
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.68 E-value=4.2e-17 Score=145.42 Aligned_cols=143 Identities=19% Similarity=0.196 Sum_probs=108.9
Q ss_pred cCCccHHHHHHHHHH-----------HHhhcCC-CCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC
Q 014101 48 SQALKPRCVRALKRI-----------FILCDHD-RDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG 115 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~-----------F~~~D~d-~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g 115 (430)
.+.|++++++.++++ |+.||+| +||.|+.+||..++..+++...+.+++..+++.+ |.+++|
T Consensus 5 ~~~l~~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~------D~d~~G 78 (190)
T 2l2e_A 5 QSKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVF------DADKNG 78 (190)
T ss_dssp SCCSCHHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHH------CSSSTT
T ss_pred cccCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHh------cCCCCC
Confidence 345666666665555 9999999 8999999999999888766666778888899888 778889
Q ss_pred -cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCC
Q 014101 116 -LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNS 194 (430)
Q Consensus 116 -i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~ 194 (430)
|+++||+.++.. .. . ....+.++.+|+.||.|++|.
T Consensus 79 ~i~~~ef~~~~~~----------------------------------~~--~-------~~~~~~~~~~f~~~D~d~~G~ 115 (190)
T 2l2e_A 79 YIDFKEFICALSV----------------------------------TS--R-------GELNDKLIWAFQLYDLDNNGL 115 (190)
T ss_dssp CEEHHHHHHHHTT----------------------------------SS--C-------SCSHHHHHHHHHHHCTTSCSC
T ss_pred eEeHHHHHHHHHH----------------------------------Hc--C-------CCHHHHHHHHHhHccCCCCCc
Confidence 999999987531 00 0 011345789999999999999
Q ss_pred CCHHHHHHhhccC----------CC-CCC---CCCcccccccccCCcccchhhHHhhhh
Q 014101 195 LRPIEVEDLFSTA----------PE-CPW---DEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 195 is~~el~~~~~~~----------~~-~~~---~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
|+.+||..++... +. .+. ....+++.+|.|+||.|+++||.....
T Consensus 116 i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 174 (190)
T 2l2e_A 116 ISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSK 174 (190)
T ss_dssp BCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999988651 10 011 123466789999999999999998754
No 176
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.68 E-value=1.2e-17 Score=142.37 Aligned_cols=133 Identities=14% Similarity=0.153 Sum_probs=105.2
Q ss_pred cHHHHHHHHHHHHhhcCCC-CCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCCcCHHhHHHHHHHHHH
Q 014101 52 KPRCVRALKRIFILCDHDR-DGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERGLTLAGFLFLHALFIE 130 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~-dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~gi~~~eFl~~~~~~~~ 130 (430)
..++++.++++|..||+|+ ||.|+.+||..++.. +|..++..++..+++.+ |.+ |+|+||+.++....
T Consensus 9 ~~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~------d~~---i~~~eF~~~~~~~~- 77 (146)
T 2qac_A 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARK-LGLAPSSIDEKKIKELY------GDN---LTYEQYLEYLSICV- 77 (146)
T ss_dssp HHHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHH-TTCCCCHHHHHHHHHHH------CSE---ECHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CCC---CCHHHHHHHHHHHh-
Confidence 4567888999999999999 999999999999776 58899999999999988 333 99999998864210
Q ss_pred cCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCC
Q 014101 131 KGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPEC 210 (430)
Q Consensus 131 ~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~ 210 (430)
. . ....+.++.+|+.||+||+|+|+.+||+.++...+..
T Consensus 78 --------------------------------~--~-------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~ 116 (146)
T 2qac_A 78 --------------------------------H--D-------KDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDA 116 (146)
T ss_dssp --------------------------------C--T-------TCCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSC
T ss_pred --------------------------------c--C-------cchHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCC
Confidence 0 0 0113458899999999999999999999999875422
Q ss_pred C--CCCCcccccccccCCcccchhhHHhhh
Q 014101 211 P--WDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 211 ~--~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
. .....+++.+ |+||.|+|+||+..+
T Consensus 117 ~~~~~~~~~~~~~--d~dg~i~~~eF~~~l 144 (146)
T 2qac_A 117 LTDQEAIDALNAF--SSEDNIDYKLFCEDI 144 (146)
T ss_dssp CCHHHHHHHHHHH--CSSSEEEHHHHHHHH
T ss_pred CCHHHHHHHHHHc--CCCCcCcHHHHHHHH
Confidence 1 1223455566 999999999999875
No 177
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.68 E-value=6.5e-17 Score=140.99 Aligned_cols=122 Identities=13% Similarity=0.147 Sum_probs=99.2
Q ss_pred HHHHhhcCCCCCccCHHHHHHHHHHhcCC-----CCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCc
Q 014101 61 RIFILCDHDRDGALSDAELNDFQVKCFNS-----PLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRL 134 (430)
Q Consensus 61 ~~F~~~D~d~dG~is~~El~~~~~~~~g~-----~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~ 134 (430)
+.|..+|+|+||.|+.+||..++..+ |. +++.+++..+++.+ |.+++| |+|+||+.++..
T Consensus 3 ~~F~~~D~d~~G~i~~~el~~~l~~l-g~~~~~~~~~~~~~~~l~~~~------D~~~~g~i~~~eF~~~~~~------- 68 (165)
T 1k94_A 3 YTYFSAVAGQDGEVDAEELQRCLTQS-GINGTYSPFSLETCRIMIAML------DRDHTGKMGFNAFKELWAA------- 68 (165)
T ss_dssp HHHHHHHHGGGTSBCHHHHHHHHHHH-TTTTTSCCCCHHHHHHHHHHH------CTTCSSCBCHHHHHHHHHH-------
T ss_pred HHHHHHhCCCCCcCCHHHHHHHHHHh-ccccCCCCCCHHHHHHHHHHh------CCCCCCcCCHHHHHHHHHH-------
Confidence 46999999999999999999998775 54 68999999999998 677888 999999988641
Q ss_pred hhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--C
Q 014101 135 ETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--W 212 (430)
Q Consensus 135 ~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~ 212 (430)
.+.++.+|+.||+|++|.|+.+||+.++...+..+ .
T Consensus 69 ------------------------------------------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~ 106 (165)
T 1k94_A 69 ------------------------------------------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQ 106 (165)
T ss_dssp ------------------------------------------HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHH
T ss_pred ------------------------------------------HHHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHH
Confidence 13477899999999999999999999998754322 1
Q ss_pred CCCcccccccccCCcccchhhHHhhhhh
Q 014101 213 DEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 213 ~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
....+++.+ |++|.|+|+||+..+..
T Consensus 107 ~~~~~~~~~--d~dg~i~~~eF~~~~~~ 132 (165)
T 1k94_A 107 TLTTIVKRY--SKNGRIFFDDYVACCVK 132 (165)
T ss_dssp HHHHHHHHH--CBTTBCBHHHHHHHHHH
T ss_pred HHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 223455555 89999999999987654
No 178
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.68 E-value=3.1e-17 Score=148.23 Aligned_cols=140 Identities=16% Similarity=0.172 Sum_probs=110.7
Q ss_pred CccHHHHHHHHHHHHhhcCC-CCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHD-RDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d-~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..|....++++++|+.||+| +||.|+.+||..++.. +|.+.+.+++..+++.+ |.+++| |+|+||+.++..
T Consensus 15 ~~t~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~f~~~------D~d~~G~i~~~Ef~~~~~~ 87 (204)
T 1jba_A 15 AVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKV-PDNEEATQYVEAMFRAF------DTNGDNTIDFLEYVAALNL 87 (204)
T ss_dssp SCCHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHC-CSSSTTHHHHHHHHHHH------CCSSSSEECHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHH-hcCCCcHHHHHHHHHHH------cCCCCCeEeHHHHHHHHHH
Confidence 34566788999999999999 8999999999999765 56688999999999998 788899 999999998652
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
... + ...+.++.+|+.||.|++|.|+.+||..++...
T Consensus 88 ~~~---------------------------~----------------~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~ 124 (204)
T 1jba_A 88 VLR---------------------------G----------------TLEHKLKWTFKIYDKDRNGCIDRQELLDIVESI 124 (204)
T ss_dssp HSS---------------------------C----------------CCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH
T ss_pred Hcc---------------------------C----------------CHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 110 0 011347899999999999999999999988653
Q ss_pred ----C----C----------CC-CCCCcccccccccCCcccchhhHHhhhh
Q 014101 208 ----P----E----------CP-WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 208 ----~----~----------~~-~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+ . .+ .....+++.+|.|+||.|+++||+..+.
T Consensus 125 ~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~ 175 (204)
T 1jba_A 125 YKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 175 (204)
T ss_dssp HHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHT
T ss_pred HHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 1 0 00 0123456789999999999999998754
No 179
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.68 E-value=6.5e-17 Score=148.94 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=107.9
Q ss_pred cCCccHHHHHHHHHHHHhhcCC--CCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHD--RDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d--~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
...|++++++.++++|..+|+| +||.|+.+||..++.. +....+..+..+++.+ |.+++| |+|+||+.+
T Consensus 39 ~~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~--~~~~~~~~~~~~f~~~------D~d~dG~I~~~Ef~~~ 110 (226)
T 2zfd_A 39 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLF------DTKHNGILGFEEFARA 110 (226)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS--CSSCCCHHHHHHHHHH------CSSCSSSBCHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc--cCcccHHHHHHHHHHH------cCCCCCcCcHHHHHHH
Confidence 3568999999999999999999 9999999999998764 3333445567788888 778889 999999988
Q ss_pred HHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhh
Q 014101 125 HALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLF 204 (430)
Q Consensus 125 ~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~ 204 (430)
+.... + .....+.++.+|+.||.||||.|+.+||..++
T Consensus 111 ~~~~~----------------------------~--------------~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l 148 (226)
T 2zfd_A 111 LSVFH----------------------------P--------------NAPIDDKIHFSFQLYDLKQQGFIERQEVKQMV 148 (226)
T ss_dssp HHHTS----------------------------T--------------TSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHH
T ss_pred HHHHc----------------------------c--------------CCCHHHHHHHHHHHhCCCCCCcccHHHHHHHH
Confidence 64210 0 01123458899999999999999999999998
Q ss_pred c----cCCCCCCCC---Ccc----cccccccCCcccchhhHHhhhh
Q 014101 205 S----TAPECPWDE---APY----KDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 205 ~----~~~~~~~~~---~~~----~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
. ..+ .+... ..+ .+.+|.|+||.|+++||+....
T Consensus 149 ~~~~~~~g-~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~ 193 (226)
T 2zfd_A 149 VATLAESG-MNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 193 (226)
T ss_dssp HHHHHHTT-CCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHH
T ss_pred HHHHHHcC-CCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 5 222 22111 122 3489999999999999998754
No 180
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=99.68 E-value=2.3e-16 Score=141.04 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=80.1
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCC----------hhHHHhhhc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIP----------EEAVAKLLS 352 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G----------~e~~~~~~~ 352 (430)
...++|+|+|.+|||||||++++++..+...+.++.+.+........++ .+.+||++| ++.+..+.
T Consensus 21 ~~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~t~~~~~~~~~~---~~~l~Dt~G~~~~~~~~~~~~~~~~~~- 96 (195)
T 1svi_A 21 GGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIND---ELHFVDVPGYGFAKVSKSEREAWGRMI- 96 (195)
T ss_dssp SCCCEEEEEEBTTSSHHHHHHHHHTC-------------CCEEEEEETT---TEEEEECCCBCCCSSCHHHHHHHHHHH-
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCccccCCCCCceeeEEEEEECC---cEEEEECCCCCccccCHHHHHHHHHHH-
Confidence 4568999999999999999999999886555556665555545555542 478899999 77777766
Q ss_pred cccccccc---cEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc
Q 014101 353 NKDSLAAC---DIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA 411 (430)
Q Consensus 353 ~~~~~~~a---d~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~ 411 (430)
..+++.+ |++++|+|++++.++.... ++..+... ++|+++|+||+|+.+.+
T Consensus 97 -~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~------~~p~i~v~nK~Dl~~~~ 150 (195)
T 1svi_A 97 -ETYITTREELKAVVQIVDLRHAPSNDDVQ-MYEFLKYY------GIPVIVIATKADKIPKG 150 (195)
T ss_dssp -HHHHHHCTTEEEEEEEEETTSCCCHHHHH-HHHHHHHT------TCCEEEEEECGGGSCGG
T ss_pred -HHHHhhhhcCCEEEEEEECCCCCCHHHHH-HHHHHHHc------CCCEEEEEECcccCChH
Confidence 5666666 9999999999887776542 22223221 68999999999998754
No 181
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=99.67 E-value=7.1e-17 Score=139.48 Aligned_cols=126 Identities=17% Similarity=0.185 Sum_probs=83.6
Q ss_pred eEEEEeCCCCCCHHHHHHHHhCCCCCC-CcCCCccceEEEEEEEcCCCeEEEEEEeCCChhH-------HHhhhcccccc
Q 014101 286 FQCFVFGPKKAGKSVLLNSFLGRPFSD-NYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEA-------VAKLLSNKDSL 357 (430)
Q Consensus 286 ~kI~vvG~~~vGKSSLi~~l~~~~~~~-~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~-------~~~~~~~~~~~ 357 (430)
.||+++|++|||||||++++.+..+.. ...++.+.+.....+...+ ..+.+||++|.+. +...+ ..++
T Consensus 2 ~ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~Dt~G~~~~~~~~~~~~~~~--~~~~ 77 (161)
T 2dyk_A 2 HKVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDR--GRFLLVDTGGLWSGDKWEKKIQEKV--DRAL 77 (161)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHCCC-----------CCEEEEEEETT--EEEEEEECGGGCSSSSCCHHHHHHH--HHHT
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCeeeccCCCCceecceEEEEEeCC--ceEEEEECCCCCCccchHHHHHHHH--HHHH
Confidence 689999999999999999999887542 2234444455555666663 4678999999876 33333 4678
Q ss_pred ccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCC
Q 014101 358 AACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVM 426 (430)
Q Consensus 358 ~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~ 426 (430)
+.+|++++|+|++++.+.. ..|+..+.... ++|+++|+||+|+.+.+ +++.+++ ++++
T Consensus 78 ~~~~~~i~v~d~~~~~~~~--~~~~~~~~~~~-----~~p~ilv~nK~Dl~~~~---~~~~~~~-~~~~ 135 (161)
T 2dyk_A 78 EDAEVVLFAVDGRAELTQA--DYEVAEYLRRK-----GKPVILVATKVDDPKHE---LYLGPLY-GLGF 135 (161)
T ss_dssp TTCSEEEEEEESSSCCCHH--HHHHHHHHHHH-----TCCEEEEEECCCSGGGG---GGCGGGG-GGSS
T ss_pred HhCCEEEEEEECCCcccHh--HHHHHHHHHhc-----CCCEEEEEECcccccch---HhHHHHH-hCCC
Confidence 9999999999999854432 22333322221 68999999999998742 3344555 5565
No 182
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=99.67 E-value=7.2e-17 Score=151.86 Aligned_cols=136 Identities=15% Similarity=0.107 Sum_probs=100.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhh----cccccc-
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLL----SNKDSL- 357 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~----~~~~~~- 357 (430)
...++|+++|.+|||||||+|+|++..+.....|+.+.......+... ...+.+||++|...+...+ -...++
T Consensus 3 ~~~~kI~lvG~~nvGKTsL~n~l~g~~~~~~~~pg~tv~~~~~~~~~~--~~~~~l~DtpG~~~~~~~~~~e~v~~~~~~ 80 (258)
T 3a1s_A 3 LHMVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYK--GYTINLIDLPGTYSLGYSSIDEKIARDYLL 80 (258)
T ss_dssp CEEEEEEEECCTTSSHHHHHHHHHTTCEEEEECTTSCCEEEEEEEEET--TEEEEEEECCCCSSCCSSSHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHHHCCCCcccCCCCceEEEEEEEEEEC--CeEEEEEECCCcCccCCCCHHHHHHHHHHh
Confidence 346899999999999999999999988765555666665555555544 3678899999986654321 002333
Q ss_pred -ccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 358 -AACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 358 -~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
..+|++++|+|+++.++.. .|+..+... ++|+++|+||+|+...+....++.++++.+|++++
T Consensus 81 ~~~~d~ii~V~D~t~~~~~~---~~~~~l~~~------~~pvilv~NK~Dl~~~~~i~~~~~~l~~~lg~~vi 144 (258)
T 3a1s_A 81 KGDADLVILVADSVNPEQSL---YLLLEILEM------EKKVILAMTAIDEAKKTGMKIDRYELQKHLGIPVV 144 (258)
T ss_dssp HSCCSEEEEEEETTSCHHHH---HHHHHHHTT------TCCEEEEEECHHHHHHTTCCBCHHHHHHHHCSCEE
T ss_pred hcCCCEEEEEeCCCchhhHH---HHHHHHHhc------CCCEEEEEECcCCCCccchHHHHHHHHHHcCCCEE
Confidence 5899999999999866543 466666543 68999999999997654322457889999999876
No 183
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.67 E-value=1.2e-16 Score=150.36 Aligned_cols=188 Identities=12% Similarity=0.126 Sum_probs=134.4
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHH---hcCC--CCCHHHHHHHHHHH-HhhhcCCccCCC-cCHHhH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVK---CFNS--PLQPSEIVGVKRVV-QEKLREGVNERG-LTLAGF 121 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~---~~g~--~~~~~e~~~i~~~~-~~~~~~d~~~~g-i~~~eF 121 (430)
..+++.+.+.|+++|+.||+|+||.|+.+||..+++. .+|. .++++++..+++.+ ... |.+++| |+|+||
T Consensus 3 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~---D~d~~g~i~~~Ef 79 (272)
T 2be4_A 3 SAFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAY---DATFDGRLQIEEL 79 (272)
T ss_dssp CCCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHH---HHTCCSEEEHHHH
T ss_pred HHHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh---cCCCCCcEeHHHH
Confidence 4566677789999999999999999999999999772 4577 88999998876443 222 567888 999999
Q ss_pred HHHH-----------HHHHHcCCchhHHHHHHhhcCCCCcccccccC-CCCccc-CCCCCccccCHHH-HHHHHHHHHHh
Q 014101 122 LFLH-----------ALFIEKGRLETTWTVLRKFGYNNDIKLADELI-PYSAFK-RAPDQSVELTNEA-IDFLKGIFELF 187 (430)
Q Consensus 122 l~~~-----------~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~-~~~~~~-~~~~~~~~~s~~~-~~~l~~~F~~f 187 (430)
+.++ .........+.+..+|+.|+.|+++.|+.+.+ . .+. ........++... ...+..+|+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~--~l~~~~~~~g~~~~~~~~~~~~~~~~~~~ 157 (272)
T 2be4_A 80 ANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKN--FLKDLFLQHKKKIPPNKLDEYTDAMMKIF 157 (272)
T ss_dssp HHHHSCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHH--HHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHH--HHHHHHHhcCCCCCHHHHHHHHHHHHHHh
Confidence 9983 21112345577888999999999999987766 2 111 0000011222322 23356799999
Q ss_pred cCCCCCCCCHHHHHHhhccCCCCCCC--------------CCcccccccccCCcccchhhHHhhhhhh
Q 014101 188 DADDDNSLRPIEVEDLFSTAPECPWD--------------EAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 188 D~d~dG~is~~el~~~~~~~~~~~~~--------------~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
|.|+||.|+.+|+..++...+...|. ...+.+.+|.|++|.|+.+||...+...
T Consensus 158 D~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~ 225 (272)
T 2be4_A 158 DKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDM 225 (272)
T ss_dssp CSSCSSEEEHHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHH
T ss_pred ccCCCCcCcHHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHH
Confidence 99999999999999998652211111 1234568899999999999998876544
No 184
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.67 E-value=8.6e-17 Score=145.58 Aligned_cols=141 Identities=16% Similarity=0.172 Sum_probs=106.7
Q ss_pred CCccHHHHHHHHHHHHhhcCC--CCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHD--RDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d--~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
..+++++++.++++|..+|+| +||.|+.+||..++.. .....+..+..+++.+ |.+++| |+|+||+.++
T Consensus 29 ~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~--~~~~~~~~~~~~f~~~------D~d~~g~i~~~Ef~~~~ 100 (207)
T 2ehb_A 29 TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR--NRNRRNLFADRIFDVF------DVKRNGVIEFGEFVRSL 100 (207)
T ss_dssp SSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS--CTTCCCHHHHHHHHHH------CTTCSSEECHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc--cccccHHHHHHHHHHh------cCCCCCeEeHHHHHHHH
Confidence 458999999999999999999 9999999999998764 3333445667788888 678889 9999999875
Q ss_pred HHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 126 ALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 126 ~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
.... . .....+.++.+|+.||.||||+|+.+||..++.
T Consensus 101 ~~~~----------------------------------~--------~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~ 138 (207)
T 2ehb_A 101 GVFH----------------------------------P--------SAPVHEKVKFAFKLYDLRQTGFIEREELKEMVV 138 (207)
T ss_dssp GGGS----------------------------------T--------TSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred HHHc----------------------------------c--------CCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 3100 0 001234588999999999999999999999985
Q ss_pred cC---CCCCCC---CCc----ccccccccCCcccchhhHHhhhh
Q 014101 206 TA---PECPWD---EAP----YKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 206 ~~---~~~~~~---~~~----~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.. .+.+.. ... +.+.+|.|+||.|+++||+....
T Consensus 139 ~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 182 (207)
T 2ehb_A 139 ALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS 182 (207)
T ss_dssp HHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred HHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 21 111111 112 23589999999999999998754
No 185
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.67 E-value=3.7e-17 Score=145.27 Aligned_cols=135 Identities=16% Similarity=0.132 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcC
Q 014101 54 RCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKG 132 (430)
Q Consensus 54 ~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~ 132 (430)
.++.+++++|..|| +||.|+.+||..+ +|...+++++..+++.++... .+++| |+|+||+.++.....
T Consensus 25 ~~~~~~~~~F~~~D--~dG~I~~~el~~~----lg~~~~~~~~~~i~~~~d~~~---~~~~~~i~~~ef~~~~~~~~~-- 93 (179)
T 3a8r_A 25 DGWAAVEKRFNQLQ--VDGVLLRSRFGKC----IGMDGSDEFAVQMFDSLARKR---GIVKQVLTKDELKDFYEQLTD-- 93 (179)
T ss_dssp CCHHHHHHHHHHHC--BTTBEEGGGHHHH----HTCCSCHHHHHHHHHHHHHHH---TCCSSEECHHHHHHHHHHHHC--
T ss_pred hhHHHHHHHHhccC--CCCCCcHHHHHHH----HCCCCcHHHHHHHHHHHHHhc---cCCCCCcCHHHHHHHHHHHcC--
Confidence 44678999999999 8999999999874 488888889999999886542 23445 999999987542110
Q ss_pred CchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc-cCCCC-
Q 014101 133 RLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS-TAPEC- 210 (430)
Q Consensus 133 ~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~-~~~~~- 210 (430)
....+.|+.+|+.||+||||+|+.+||+.++. ..+..
T Consensus 94 -----------------------------------------~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~ 132 (179)
T 3a8r_A 94 -----------------------------------------QGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANK 132 (179)
T ss_dssp -----------------------------------------CCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTH
T ss_pred -----------------------------------------CCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhcccc
Confidence 01234589999999999999999999999997 43322
Q ss_pred -------C-CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 211 -------P-WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 211 -------~-~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
+ .....+++.+|.|+||.|+|+||+..+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 170 (179)
T 3a8r_A 133 LSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ 170 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred ccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 1 22345778899999999999999988653
No 186
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.67 E-value=6.8e-17 Score=142.93 Aligned_cols=116 Identities=9% Similarity=0.050 Sum_probs=90.7
Q ss_pred cCCCCCccCHHHHHHHHHHhc-----CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHH
Q 014101 67 DHDRDGALSDAELNDFQVKCF-----NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTV 140 (430)
Q Consensus 67 D~d~dG~is~~El~~~~~~~~-----g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~ 140 (430)
++|+||.|+.+||+.+++.++ |.+++.+++..+++.+ |.+++| |+|+||+.++..
T Consensus 14 ~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~------D~d~~G~I~f~EF~~~~~~------------- 74 (174)
T 2i7a_A 14 LVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALM------ELKVNGRLDQEEFARLWKR------------- 74 (174)
T ss_dssp SCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHH------CSSCSSEECHHHHHHHHHH-------------
T ss_pred cCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH------CCCCCCcCCHHHHHHHHHH-------------
Confidence 689999999999999988762 6788999999999998 778889 999999988642
Q ss_pred HHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC----CCCC--CCC
Q 014101 141 LRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA----PECP--WDE 214 (430)
Q Consensus 141 l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~----~~~~--~~~ 214 (430)
.+.++++|+.|| |++|+|+.+||+.++... +..+ ...
T Consensus 75 ------------------------------------~~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~ 117 (174)
T 2i7a_A 75 ------------------------------------LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELL 117 (174)
T ss_dssp ------------------------------------HHHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHH
T ss_pred ------------------------------------HHHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHH
Confidence 124678889999 899999999998888765 4322 112
Q ss_pred CcccccccccCCcccchhhHHhhhh
Q 014101 215 APYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 215 ~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
..+++.+| |+||.|+|+||+..+.
T Consensus 118 ~~l~~~~d-d~dG~I~~~EF~~~~~ 141 (174)
T 2i7a_A 118 HLVTLRYS-DSVGRVSFPSLVCFLM 141 (174)
T ss_dssp HHHHHHHS-CTTSEECHHHHHHHHH
T ss_pred HHHHHHHc-CCCCeEcHHHHHHHHH
Confidence 34667788 8888899998888754
No 187
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=99.67 E-value=4.6e-16 Score=150.20 Aligned_cols=135 Identities=19% Similarity=0.176 Sum_probs=101.6
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcC-CCccceEEEEEEEcCCCeEEEEEEeCCChhH----------HHhh
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYT-PTTDERYAVNVVDQPGGTKKTVVLREIPEEA----------VAKL 350 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~-~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~----------~~~~ 350 (430)
+.+.-.|+++|.+|||||||+|+|++..+...+. +..+.......+..+ ....+.+|||+|... +...
T Consensus 7 ~~~~g~v~ivG~~nvGKSTLin~l~g~~~~i~s~~~~tT~~~~~~~~~~~-~~~~i~lvDTPG~~~~~~~~~l~~~~~~~ 85 (308)
T 3iev_A 7 HMKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIP-NEAQIIFLDTPGIYEPKKSDVLGHSMVEI 85 (308)
T ss_dssp CCEEEEEEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEEEEEET-TTEEEEEEECCCCCCCCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCcHHHHHHHHhCCCccccCCCCCceeeEEEEEEecC-CCCeEEEEECcCCCccccchhHHHHHHHH
Confidence 4556799999999999999999999998875442 222222222333333 256788999999733 2233
Q ss_pred hccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCC-CccCcHHHHHHHHHHhC
Q 014101 351 LSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLD-SFAMAIQDSTRVFTFLV 425 (430)
Q Consensus 351 ~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~-~~~v~~~~~~~~~~~~g 425 (430)
. ..+++.+|++++|+|+++..++.....|+..+... ++|+++|+||+|+. +.......+.++++.++
T Consensus 86 ~--~~~l~~aD~il~VvD~~~~~~~~~~~~~~~~l~~~------~~pvilV~NK~Dl~~~~~~~~~~~~~l~~~~~ 153 (308)
T 3iev_A 86 A--KQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPL------NKPVIVVINKIDKIGPAKNVLPLIDEIHKKHP 153 (308)
T ss_dssp H--HHHHHHCSEEEEEEETTTBSCHHHHHHHHHHTGGG------CCCEEEEEECGGGSSSGGGGHHHHHHHHHHCT
T ss_pred H--HHHhhcCCEEEEEEeCCCCCCchhHHHHHHHHHhc------CCCEEEEEECccCCCCHHHHHHHHHHHHHhcc
Confidence 3 56788999999999999988888887777777653 68999999999998 55566778888888875
No 188
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}
Probab=99.67 E-value=2.8e-17 Score=154.54 Aligned_cols=131 Identities=12% Similarity=0.074 Sum_probs=100.2
Q ss_pred eEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHh----------hhcccc
Q 014101 286 FQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAK----------LLSNKD 355 (430)
Q Consensus 286 ~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~----------~~~~~~ 355 (430)
.+|+++|.+|||||||+|+|++........|+.+.+.....+.+.+ ..+.+||++|...+.. +. ..
T Consensus 2 ~kI~lvG~~n~GKSTL~n~L~g~~~~v~~~pg~Tv~~~~~~~~~~~--~~~~lvDtpG~~~~~~~~~~~~~~e~i~--~~ 77 (256)
T 3iby_A 2 THALLIGNPNCGKTTLFNALTNANQRVGNWPGVTVEKKTGEFLLGE--HLIEITDLPGVYSLVANAEGISQDEQIA--AQ 77 (256)
T ss_dssp CEEEEEESTTSSHHHHHHHHHTTSEEEEECTTSSSEEEEEEEEETT--EEEEEEECCCCSSCC------CHHHHHH--HH
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCCccCCCCceEEEEEEEEEECC--eEEEEEeCCCcccccccccCCCHHHHHH--HH
Confidence 4899999999999999999999986666667777777777777774 4788999999865543 22 34
Q ss_pred cc--ccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 356 SL--AACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 356 ~~--~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
++ +++|++++|+|+++.+++..+..++. .. ++|+++|+||+|+...+........+++.+|++++
T Consensus 78 ~~~~~~~d~vi~VvDas~~~~~~~l~~~l~---~~------~~pvilv~NK~Dl~~~~~~~~~~~~l~~~lg~~vi 144 (256)
T 3iby_A 78 SVIDLEYDCIINVIDACHLERHLYLTSQLF---EL------GKPVVVALNMMDIAEHRGISIDTEKLESLLGCSVI 144 (256)
T ss_dssp HHHHSCCSEEEEEEEGGGHHHHHHHHHHHT---TS------CSCEEEEEECHHHHHHTTCEECHHHHHHHHCSCEE
T ss_pred HHhhCCCCEEEEEeeCCCchhHHHHHHHHH---Hc------CCCEEEEEEChhcCCcCCcHHHHHHHHHHcCCCEE
Confidence 55 88999999999998766655444432 22 68999999999997754333446678888998875
No 189
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.66 E-value=1.5e-16 Score=140.98 Aligned_cols=140 Identities=16% Similarity=0.249 Sum_probs=108.0
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..+++++++.+.++|..+ |+||.|+.+||..++..++....+.+++..+++.+ |.+++| |+++||+.++..
T Consensus 13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~------D~d~~g~i~~~Ef~~~~~~ 84 (183)
T 1s6c_A 13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAF------DTTQTGSVKFEDFVTALSI 84 (183)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHH------CTTCSSCEEHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHh------CCCCCCcEeHHHHHHHHHH
Confidence 457888777766666654 79999999999999887765558899999999999 678889 999999998653
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
.... ...+.++.+|+.||.||||.|+.+||..++...
T Consensus 85 ~~~~-------------------------------------------~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~ 121 (183)
T 1s6c_A 85 LLRG-------------------------------------------TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 121 (183)
T ss_dssp HHHC-------------------------------------------CHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HcCC-------------------------------------------CHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 2210 012457899999999999999999999998653
Q ss_pred ----CCC--C-CC-------CCcccccccccCCcccchhhHHhhhh
Q 014101 208 ----PEC--P-WD-------EAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 208 ----~~~--~-~~-------~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+.. | .. ...+++.+|.|+||.|+++||+..+.
T Consensus 122 ~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~ 167 (183)
T 1s6c_A 122 YDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQ 167 (183)
T ss_dssp HHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred HHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 211 1 11 13466789999999999999998754
No 190
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=99.66 E-value=1.6e-16 Score=139.98 Aligned_cols=120 Identities=18% Similarity=0.228 Sum_probs=88.1
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCC-CcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHH----Hh--hhccccc
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSD-NYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAV----AK--LLSNKDS 356 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~-~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~----~~--~~~~~~~ 356 (430)
+.+||+++|++|||||||++++.+..+.. ...++.+.++....+.+++ ..+.+|||+|.+.+ .. +.....+
T Consensus 3 ~~~ki~ivG~~g~GKStLl~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~--~~~~l~Dt~G~~~~~~~~~~~~~~~~~~~ 80 (172)
T 2gj8_A 3 HGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDG--MPLHIIDTAGLREASDEVERIGIERAWQE 80 (172)
T ss_dssp -CEEEEEEESTTSSHHHHHHHHHTSCCSCCCSSTTCCCSCEEEEEEETT--EEEEEEECCCCSCCSSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCcceeeCCCCceeceeeEEEEECC--eEEEEEECCCcccchhHHHHHHHHHHHHH
Confidence 45799999999999999999999887542 2235555566666777774 34789999997532 11 1111246
Q ss_pred cccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC
Q 014101 357 LAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDS 409 (430)
Q Consensus 357 ~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~ 409 (430)
++.+|++++|||++++.++. ...|+..+..... .++|+++|+||+|+.+
T Consensus 81 ~~~ad~~i~v~D~~~~~s~~-~~~~~~~~~~~~~---~~~p~ilv~NK~Dl~~ 129 (172)
T 2gj8_A 81 IEQADRVLFMVDGTTTDAVD-PAEIWPEFIARLP---AKLPITVVRNKADITG 129 (172)
T ss_dssp HHTCSEEEEEEETTTCCCCS-HHHHCHHHHHHSC---TTCCEEEEEECHHHHC
T ss_pred HHhCCEEEEEEECCCCCCHH-HHHHHHHHHHhcc---cCCCEEEEEECccCCc
Confidence 78999999999999988876 4567777766542 2689999999999854
No 191
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A*
Probab=99.66 E-value=7.1e-17 Score=153.32 Aligned_cols=134 Identities=13% Similarity=0.099 Sum_probs=99.2
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhc--------cccc
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLS--------NKDS 356 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~--------~~~~ 356 (430)
.++|+++|.+|||||||+|+|++..+.....|+++.+.....+...+ ..+.+||++|...+..... ...+
T Consensus 3 ~~~I~lvG~~n~GKSTLin~l~g~~~~v~~~~g~t~~~~~~~~~~~~--~~~~liDtpG~~~~~~~~~~~~~~e~i~~~~ 80 (274)
T 3i8s_A 3 KLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTD--HQVTLVDLPGTYSLTTISSQTSLDEQIACHY 80 (274)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHTTCEEEEECTTSSSEEEEEEEECSS--CEEEEEECCCCSCSCC----CCHHHHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHHHHhCCCcccCCCCCeeEEEEEEEEEeCC--CceEEEECcCCCccccccccCCHHHHHHHHH
Confidence 47999999999999999999999987656667777777777777764 3567899999766552110 0122
Q ss_pred --cccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 357 --LAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 357 --~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
.+.+|++++|+|+++.++...+..++.+. ++|+++|+||+|+.+.+.......++++.+|++++
T Consensus 81 ~~~~~~d~ii~VvD~~~~~~~~~~~~~l~~~---------~~p~ivv~NK~Dl~~~~~~~~~~~~l~~~lg~~~i 146 (274)
T 3i8s_A 81 ILSGDADLLINVVDASNLERNLYLTLQLLEL---------GIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVI 146 (274)
T ss_dssp HHHTCCSEEEEEEEGGGHHHHHHHHHHHHHH---------TCCEEEEEECHHHHHHTTEEECHHHHHHHHTSCEE
T ss_pred HhhcCCCEEEEEecCCChHHHHHHHHHHHhc---------CCCEEEEEECccchhhhhHHHHHHHHHHhcCCCEE
Confidence 37899999999999866655544444432 58999999999997654333456788888898865
No 192
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.65 E-value=3.4e-16 Score=144.49 Aligned_cols=139 Identities=14% Similarity=0.236 Sum_probs=108.5
Q ss_pred CccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALF 128 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~ 128 (430)
.+++++++.+.+.|.. .|+||.|+.+||..++...++...+...+..+++.+ |.+++| |+|+||+.++..+
T Consensus 60 ~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~------D~d~~G~I~~~Ef~~~l~~~ 131 (229)
T 3dd4_A 60 KFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAF------DTDHNGAVSFEDFIKGLSIL 131 (229)
T ss_dssp HHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTT------CSSCCSSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHc------CCCCCCeEeHHHHHHHHHHH
Confidence 4567777777777755 688999999999999888777777888888899888 678889 9999999986533
Q ss_pred HHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC
Q 014101 129 IEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP 208 (430)
Q Consensus 129 ~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~ 208 (430)
... ...+.++.+|+.||+||||+|+.+||..++....
T Consensus 132 ~~~-------------------------------------------~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~ 168 (229)
T 3dd4_A 132 LRG-------------------------------------------TVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIY 168 (229)
T ss_dssp HHS-------------------------------------------CHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHH
T ss_pred cCC-------------------------------------------ChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHH
Confidence 210 1124588999999999999999999999987520
Q ss_pred -----------C--CC-CCCCcccccccccCCcccchhhHHhhhh
Q 014101 209 -----------E--CP-WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 209 -----------~--~~-~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+ .+ .....+++.+|.|+||.||++||+..+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~ 213 (229)
T 3dd4_A 169 DMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQ 213 (229)
T ss_dssp HHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHH
T ss_pred HHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH
Confidence 1 11 1223466889999999999999998765
No 193
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.65 E-value=2.6e-16 Score=147.26 Aligned_cols=142 Identities=18% Similarity=0.254 Sum_probs=104.0
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc---CCCCCHHHHHH----HHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCF---NSPLQPSEIVG----VKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~---g~~~~~~e~~~----i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
...++++|+.||+|+||.|+.+||..++..++ |.+++.+++.. +++.+ |.+++| |+|+||+.++..
T Consensus 102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~------d~~~dg~i~~~ef~~~~~~ 175 (263)
T 2f33_A 102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLF------DSNNDGKLELTEMARLLPV 175 (263)
T ss_dssp HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHT------CSSSSSCBCHHHHHHHSCT
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhc------CCCCCCeEcHHHHHHHHHH
Confidence 35689999999999999999999999987764 88899999887 66655 677888 999999987421
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
. + ..+ +... ......+.++.+|+.||+||||.||.+||+.++...
T Consensus 176 ~------~-------------------~~~----~~~~------~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~ 220 (263)
T 2f33_A 176 Q------E-------------------NFL----LKFQ------GIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDL 220 (263)
T ss_dssp T------T-------------------CSH----HHHH------HTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHH
T ss_pred H------H-------------------HHH----HHhc------CcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHH
Confidence 0 0 000 0000 000112458899999999999999999999998653
Q ss_pred CC-----CC-CCCCccccc-ccccCCcccchhhHHhhh
Q 014101 208 PE-----CP-WDEAPYKDA-AEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 208 ~~-----~~-~~~~~~~~~-~d~~~dg~i~~~ef~~~w 238 (430)
+. .+ .....+.+. +|.|+||.|+|+||+...
T Consensus 221 ~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~~ 258 (263)
T 2f33_A 221 CEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALIL 258 (263)
T ss_dssp HHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHHH
T ss_pred HHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHHH
Confidence 21 11 222345554 699999999999999864
No 194
>3dpu_A RAB family protein; roccor, G-domain, COR, GTP-binding, nucleotide-binding, SIGN protein; 2.90A {Chlorobaculum tepidum}
Probab=99.64 E-value=1.1e-16 Score=166.05 Aligned_cols=139 Identities=14% Similarity=0.166 Sum_probs=104.0
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEE------EEc--CCCeEEEEEEeCCChhHHHhhhcc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNV------VDQ--PGGTKKTVVLREIPEEAVAKLLSN 353 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~------v~~--~~~~~~~~i~d~~G~e~~~~~~~~ 353 (430)
....+||+++|.+|||||||++++++..+...+.+|++.++..+. +.+ .+....+.+||++|++.+..+.
T Consensus 38 ~~~~~kV~lvG~~~vGKSSLl~~l~~~~~~~~~~~t~g~~~~~~~~~~~~~v~~~~~~~~~~~~i~Dt~G~e~~~~~~-- 115 (535)
T 3dpu_A 38 HLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFHFWDFGGQEIMHASH-- 115 (535)
T ss_dssp CCCEEEEEEESSSCSSHHHHHHHHHC-----------CCCEEEEEGGGSGGGTTCSTTTTCEEEEECCCSCCTTTTTC--
T ss_pred cccceEEEEECCCCCCHHHHHHHHhcCCCCCCCCCccceEEEEeccccccceeecCCCceEEEEEEECCcHHHHHHHH--
Confidence 456799999999999999999999999988888788888776442 222 2235788999999999888876
Q ss_pred ccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHhCCccc
Q 014101 354 KDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 354 ~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~g~~~f 429 (430)
..+++.+|++++|||+++. +.+..|+..+..... +.|+|+|+||+|+.+. .+..+++++++..+++++|
T Consensus 116 ~~~l~~~d~ii~V~D~s~~---~~~~~~~~~l~~~~~----~~pvilV~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 185 (535)
T 3dpu_A 116 QFFMTRSSVYMLLLDSRTD---SNKHYWLRHIEKYGG----KSPVIVVMNKIDENPSYNIEQKKINERFPAIENRFH 185 (535)
T ss_dssp HHHHHSSEEEEEEECGGGG---GGHHHHHHHHHHHSS----SCCEEEEECCTTTCTTCCCCHHHHHHHCGGGTTCEE
T ss_pred HHHccCCcEEEEEEeCCCc---hhHHHHHHHHHHhCC----CCCEEEEEECCCcccccccCHHHHHHHHHhcCCceE
Confidence 6788999999999999764 556778888877652 6899999999999875 4678889999988888765
No 195
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.64 E-value=2.5e-17 Score=154.24 Aligned_cols=183 Identities=13% Similarity=0.141 Sum_probs=130.8
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCC------HHHHHHHHHHHHhhhcCCccCCC-cCHHh
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQ------PSEIVGVKRVVQEKLREGVNERG-LTLAG 120 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~------~~e~~~i~~~~~~~~~~d~~~~g-i~~~e 120 (430)
...|++.+.++|+++|+.||+|+||.|+.+||..++..+ |..++ ..++..++..+ |.+++| |+|+|
T Consensus 7 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l-~~~~~~~~~~~~~~~~~l~~~~------D~~~~g~i~~~E 79 (263)
T 2f33_A 7 HLQSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQEL-LQARKKAGLELSPEMKTFVDQY------GQRDDGKIGIVE 79 (263)
T ss_dssp HTTTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHH-HHHHHHHTCCCCHHHHHHHHHH------TTGGGCCBCHHH
T ss_pred hhhcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHH-HhhcCCCccchHHHHHHHHHHh------CCCCCCcCcHHH
Confidence 345788888899999999999999999999999998765 43333 37788888888 677888 99999
Q ss_pred HHHHHHHH---------HHcCCchhHHHHHHhhcCCCCcccccccC-CCCccc-CCCCCccccCHHHH-HHHHHHHHHhc
Q 014101 121 FLFLHALF---------IEKGRLETTWTVLRKFGYNNDIKLADELI-PYSAFK-RAPDQSVELTNEAI-DFLKGIFELFD 188 (430)
Q Consensus 121 Fl~~~~~~---------~~~~~~~~~w~~l~~~~y~~~l~~~~~~~-~~~~~~-~~~~~~~~~s~~~~-~~l~~~F~~fD 188 (430)
|+.++... ......+.+..+|+.|+.++++.|+.+.+ . .+. ........++.... +.+..+|+.+|
T Consensus 80 f~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~--~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d 157 (263)
T 2f33_A 80 LAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKN--FLKDLLEKANKTVDDTKLAEYTDLMLKLFD 157 (263)
T ss_dssp HHHHTTSCTTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHH--HHHHHHHHHTSCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhhhhhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHH--HHHHHHhhcCCCCCHHHHHHHHHHHHHhcC
Confidence 99986421 22335577788999999999999987665 2 110 00000011222222 23445999999
Q ss_pred CCCCCCCCHHHHHHhhccC---------CCCC-CCCCcccccccccCCcccchhhHHhhhh
Q 014101 189 ADDDNSLRPIEVEDLFSTA---------PECP-WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 189 ~d~dG~is~~el~~~~~~~---------~~~~-~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.|+||.|+.+|+..++... +..+ .......+.+|.|++|.||.+||.....
T Consensus 158 ~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~ 218 (263)
T 2f33_A 158 SNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLK 218 (263)
T ss_dssp SSSSSCBCHHHHHHHSCTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHH
T ss_pred CCCCCeEcHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Confidence 9999999999999988641 1111 0112345688999999999999987754
No 196
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.64 E-value=2.2e-16 Score=140.09 Aligned_cols=141 Identities=16% Similarity=0.138 Sum_probs=106.8
Q ss_pred cccCCccHHHHHHHHHHHHhhcC-----CC-C--CccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC--
Q 014101 46 QESQALKPRCVRALKRIFILCDH-----DR-D--GALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-- 115 (430)
Q Consensus 46 ~~~~~lt~~~~~~l~~~F~~~D~-----d~-d--G~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-- 115 (430)
.+...|++.+++.++++|..+|. |+ | |.|+.+||.. +. .+|..++.+ .+++.+ |.+++|
T Consensus 9 ~~~~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~-~~g~~~~~~---~l~~~~------D~d~~G~~ 77 (183)
T 1dgu_A 9 QDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LP-ELKANPFKE---RICRVF------STSPAKDS 77 (183)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-ST-TSSSCTTHH---HHHHHH------SCSSSSCC
T ss_pred HHHcCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HH-hhhcCcHHH---HHHHHh------CCCCCCCE
Confidence 34567999999999999999999 78 8 9999999998 54 457776654 456666 556555
Q ss_pred cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCC
Q 014101 116 LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSL 195 (430)
Q Consensus 116 i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~i 195 (430)
|+|+||+.++...... ....+.++.+|+.||+||+|+|
T Consensus 78 I~~~EF~~~~~~~~~~------------------------------------------~~~~~~l~~~F~~~D~d~~G~I 115 (183)
T 1dgu_A 78 LSFEDFLDLLSVFSDT------------------------------------------ATPDIKSHYAFRIFDFDDDGTL 115 (183)
T ss_dssp CCHHHHHHHHHHHSTT------------------------------------------CCHHHHHHHHHHHHCTTCSSEE
T ss_pred ecHHHHHHHHHHhcCC------------------------------------------CCHHHHHHHHHHHhCCCCCCcC
Confidence 9999999986521100 0122458899999999999999
Q ss_pred CHHHHHHhhccCCC----CCCC---CC----cccccccccCCcccchhhHHhhhh
Q 014101 196 RPIEVEDLFSTAPE----CPWD---EA----PYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 196 s~~el~~~~~~~~~----~~~~---~~----~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+.+||+.++...+. .+.. .. .++..+|.|+||.|+|+||+..+.
T Consensus 116 ~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~ 170 (183)
T 1dgu_A 116 NREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 170 (183)
T ss_dssp EHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHC
T ss_pred CHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 99999999876432 1111 11 267889999999999999998754
No 197
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A*
Probab=99.63 E-value=1.1e-16 Score=151.54 Aligned_cols=131 Identities=15% Similarity=0.059 Sum_probs=94.5
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHH------hhhccccccc
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVA------KLLSNKDSLA 358 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~------~~~~~~~~~~ 358 (430)
.++|+++|++|||||||+|+|++........|..+.+. +...+.. ...+.+||++|.+.+. .+. ..++.
T Consensus 3 ~~kI~lvG~~nvGKSTL~n~L~g~~~~v~~~pg~tv~~--~~~~~~~-~~~l~l~DtpG~~~~~~~~~~e~v~--~~~~~ 77 (272)
T 3b1v_A 3 MTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVER--KSGLVKK-NKDLEIQDLPGIYSMSPYSPEAKVA--RDYLL 77 (272)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHCCCCCCCSSSCCCCSC--EEEECTT-CTTEEEEECCCCSCSSCSSHHHHHH--HHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHHCCCCcccCCCCCcEEE--EEEEEec-CCeEEEEECCCcCccCCCChHHHHH--HHHHh
Confidence 47999999999999999999999875444445444433 3334443 4567899999987654 233 34444
Q ss_pred --cccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 359 --ACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 359 --~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
.+|++++|+|+++.++. ..|...+... ++|+++|+||+|+...+....++.++++.+|++++
T Consensus 78 ~~~~d~vi~V~D~t~~e~~---~~~~~~l~~~------~~p~ilv~NK~Dl~~~~~~~~~~~~l~~~lg~~vi 141 (272)
T 3b1v_A 78 SQRADSILNVVDATNLERN---LYLTTQLIET------GIPVTIALNMIDVLDGQGKKINVDKLSYHLGVPVV 141 (272)
T ss_dssp TTCCSEEEEEEEGGGHHHH---HHHHHHHHHT------CSCEEEEEECHHHHHHTTCCCCHHHHHHHHTSCEE
T ss_pred cCCCCEEEEEecCCchHhH---HHHHHHHHhc------CCCEEEEEEChhhCCcCCcHHHHHHHHHHcCCCEE
Confidence 69999999999986554 4465666542 68999999999997643223567889999998875
No 198
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.63 E-value=4.4e-17 Score=146.58 Aligned_cols=139 Identities=14% Similarity=0.176 Sum_probs=106.4
Q ss_pred ccHHHHHHHHHHHHhhcCC-CCCccCHHHHHHHHHHhcCCCCC-HHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 51 LKPRCVRALKRIFILCDHD-RDGALSDAELNDFQVKCFNSPLQ-PSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~D~d-~dG~is~~El~~~~~~~~g~~~~-~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
.|.-..++++++|+.||+| +||.|+.+||..++.. +|.... .+++..+++.+ |.+++| |+++||+.++..
T Consensus 8 ~t~~~~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~f~~~------D~d~~G~I~~~Ef~~~~~~ 80 (198)
T 2r2i_A 8 VEELSATECHQWYKKFMTECPSGQLTLYEFKQFFGL-KNLSPSANKYVEQMFETF------DFNKDGYIDFMEYVAALSL 80 (198)
T ss_dssp HHHHHTSCHHHHHHHHHHHCTTSEECHHHHHHHHTC-CSCCHHHHHHHHHHHHHH------CTTCSSCEEHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHH-hCCCcchHHHHHHHHHHH------CCCCCCeEcHHHHHHHHHH
Confidence 3555666789999999998 8999999999999764 455433 34588888888 678889 999999988652
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
.. . ....+.++.+|+.||.||||.|+.+||..++...
T Consensus 81 ~~----------------------------~---------------~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~ 117 (198)
T 2r2i_A 81 VL----------------------------K---------------GKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAI 117 (198)
T ss_dssp HS----------------------------S---------------CCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHT
T ss_pred Hc----------------------------c---------------CchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 11 0 0123458899999999999999999999999764
Q ss_pred CC-----CCCC----CCcccccccccCCcccchhhHHhhhh
Q 014101 208 PE-----CPWD----EAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 208 ~~-----~~~~----~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.. .+.. ...+++.+|.|+||.|+++||+..+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 158 (198)
T 2r2i_A 118 RAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ 158 (198)
T ss_dssp TGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 31 1111 23456789999999999999998765
No 199
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.62 E-value=3.5e-16 Score=141.55 Aligned_cols=133 Identities=17% Similarity=0.157 Sum_probs=102.8
Q ss_pred HHHHHHHhhcCC-CCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 58 ALKRIFILCDHD-RDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 58 ~l~~~F~~~D~d-~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
+++++|..||.| +||.|+.+||..++..++....+.+++..+++.+ |.+++| |+++||+.++......
T Consensus 34 ~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~------D~d~~G~i~~~Ef~~~~~~~~~~---- 103 (207)
T 2d8n_A 34 ELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSF------DSNLDGTLDFKEYVIALHMTTAG---- 103 (207)
T ss_dssp HHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHH------CTTCCSEEEHHHHHHHHHHHSCS----
T ss_pred HHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHh------cCCCCCeEeHHHHHHHHHHHcCC----
Confidence 566788899998 7999999999999887644447888899999998 678889 9999999876421100
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC----C---
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA----P--- 208 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~----~--- 208 (430)
. ..+.++.+|+.||.|+||.|+.+||..++... +
T Consensus 104 ---------------------~------------------~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~ 144 (207)
T 2d8n_A 104 ---------------------K------------------TNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPED 144 (207)
T ss_dssp ---------------------S------------------SSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHH
T ss_pred ---------------------C------------------HHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhcccc
Confidence 0 01236789999999999999999999988753 2
Q ss_pred --CCCCC-------CCcccccccccCCcccchhhHHhhhh
Q 014101 209 --ECPWD-------EAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 209 --~~~~~-------~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
..+.. ...+++.+|.|+||.|+|+||+..+.
T Consensus 145 ~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 184 (207)
T 2d8n_A 145 VKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTL 184 (207)
T ss_dssp HHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHH
T ss_pred CCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHH
Confidence 12211 23466889999999999999998865
No 200
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=99.62 E-value=1.1e-15 Score=136.19 Aligned_cols=132 Identities=17% Similarity=0.156 Sum_probs=91.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCC----------hhHHHhhhc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIP----------EEAVAKLLS 352 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G----------~e~~~~~~~ 352 (430)
...+||+|+|.+|||||||+++|++..+.... ++.+.+........+. .+.+||++| .+.+..+.
T Consensus 21 ~~~~~i~v~G~~~~GKSsli~~l~~~~~~~~~-~~~~~t~~~~~~~~~~---~~~i~Dt~G~~~~~~~~~~~~~~~~~~- 95 (195)
T 3pqc_A 21 PLKGEVAFVGRSNVGKSSLLNALFNRKIAFVS-KTPGKTRSINFYLVNS---KYYFVDLPGYGYAKVSKKERMLWKRLV- 95 (195)
T ss_dssp CTTCEEEEEEBTTSSHHHHHHHHHTSCCSCCC-SSCCCCCCEEEEEETT---TEEEEECCCBSSSCCCHHHHHHHHHHH-
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHcCcccccc-CCCCCccCeEEEEECC---cEEEEECCCCccccCChhhHHHHHHHH-
Confidence 45679999999999999999999999854433 5555554444444442 356899999 67777666
Q ss_pred cccccccc---cEEEEEEECCChhh--HHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc---CcHHHHHHHHHHh
Q 014101 353 NKDSLAAC---DIAVFVHDSSDESS--WKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA---MAIQDSTRVFTFL 424 (430)
Q Consensus 353 ~~~~~~~a---d~vilv~D~t~~~S--~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~---v~~~~~~~~~~~~ 424 (430)
..+++.+ |++++|+|+++..+ ...+..|+... ++|+++|+||+|+.+.. +..+++.+++...
T Consensus 96 -~~~~~~~~~~~~vi~v~d~~~~~~~~~~~~~~~~~~~---------~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~ 165 (195)
T 3pqc_A 96 -EDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMKSL---------NIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKY 165 (195)
T ss_dssp -HHHHHHCTTEEEEEEEEETTSCCCHHHHHHHHHHHHT---------TCCEEEEEECGGGSCGGGHHHHHHHHHHHHHSS
T ss_pred -HHHHhcCcCceEEEEEecCCCCCCHHHHHHHHHHHHc---------CCCEEEEEEChhcCChHHHHHHHHHHHHHHhhc
Confidence 4555554 99999999987533 33444454432 58999999999997642 3356677777664
Q ss_pred C-Cccc
Q 014101 425 V-MVLY 429 (430)
Q Consensus 425 g-~~~f 429 (430)
+ +++|
T Consensus 166 ~~~~~~ 171 (195)
T 3pqc_A 166 GEYTII 171 (195)
T ss_dssp CCSCEE
T ss_pred CCCceE
Confidence 4 4543
No 201
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.62 E-value=2.6e-17 Score=146.18 Aligned_cols=147 Identities=14% Similarity=0.120 Sum_probs=107.3
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHh-----cCCCCCHHHHHHHHHHHHhh---hcCCccCCC-cCHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKC-----FNSPLQPSEIVGVKRVVQEK---LREGVNERG-LTLA 119 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~-----~g~~~~~~e~~~i~~~~~~~---~~~d~~~~g-i~~~ 119 (430)
..|++++++.|+++|..||+|+||.|+.+||..++..+ +|..++.+++..++..+... ..-|.+++| |+++
T Consensus 6 ~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~ 85 (186)
T 2hps_A 6 ESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNA 85 (186)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHH
T ss_pred ccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHH
Confidence 35789999999999999999999999999999998654 47778888888886222110 111667888 9999
Q ss_pred hHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHH--HHhcCCCCCCCCH
Q 014101 120 GFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIF--ELFDADDDNSLRP 197 (430)
Q Consensus 120 eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F--~~fD~d~dG~is~ 197 (430)
| .++.... . .....+.+.++| +.||+|++|+|+.
T Consensus 86 E--~~~~~~~---~---------------------------------------~~~~~~~~~~~f~~~~fD~d~~G~I~~ 121 (186)
T 2hps_A 86 T--DSLLKMK---G---------------------------------------EEKAMAVIQSLIMYDCIDTDKDGYVSL 121 (186)
T ss_dssp H--HHHHHCC---T---------------------------------------HHHHHTTHHHHHHHHHHCTTCSSEEEH
T ss_pred H--HHHHHhc---C---------------------------------------ChHHHHHHHHHHHHHHccCCCCCcCCH
Confidence 9 3332100 0 011122355667 8889999999999
Q ss_pred HHHHHhhccCCC-CC-CCCCcccccccccCCcccchhhHHhhhh
Q 014101 198 IEVEDLFSTAPE-CP-WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 198 ~el~~~~~~~~~-~~-~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+||+.++...+. .+ .....+++.+|.|+||.|+++||+..+.
T Consensus 122 ~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~ 165 (186)
T 2hps_A 122 PEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165 (186)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 999999986532 11 1224567889999999999999998854
No 202
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.62 E-value=9.2e-16 Score=141.16 Aligned_cols=139 Identities=16% Similarity=0.245 Sum_probs=105.8
Q ss_pred CccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALF 128 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~ 128 (430)
.+++++++.+.+.|+.. |+||.|+.+||..++..++....+.+++..+++.+ |.+++| |+|+||+.++...
T Consensus 47 ~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~------D~d~~G~I~~~Ef~~~l~~~ 118 (224)
T 1s1e_A 47 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAF------DTTQTGSVKFEDFVTALSIL 118 (224)
T ss_dssp SCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHH------CTTCSSCBCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHh------cCCCCCcEeHHHHHHHHHHH
Confidence 36777655555555443 59999999999999887655557899999999998 678889 9999999986532
Q ss_pred HHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC-
Q 014101 129 IEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA- 207 (430)
Q Consensus 129 ~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~- 207 (430)
... ...+.++.+|+.||.||||+|+.+||..++...
T Consensus 119 ~~~-------------------------------------------~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~ 155 (224)
T 1s1e_A 119 LRG-------------------------------------------TVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIY 155 (224)
T ss_dssp HHC-------------------------------------------CHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHH
T ss_pred ccC-------------------------------------------CHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHH
Confidence 210 023458899999999999999999999988643
Q ss_pred ---CCC--C-CC-------CCcccccccccCCcccchhhHHhhhh
Q 014101 208 ---PEC--P-WD-------EAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 208 ---~~~--~-~~-------~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+.. | .. ...+++.+|.|+||.|+++||+..+.
T Consensus 156 ~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~ 200 (224)
T 1s1e_A 156 DMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ 200 (224)
T ss_dssp HHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 211 1 11 23466789999999999999998865
No 203
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.62 E-value=2.4e-16 Score=140.36 Aligned_cols=134 Identities=19% Similarity=0.198 Sum_probs=104.5
Q ss_pred HHHHHHHHhhcCC-CCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCc
Q 014101 57 RALKRIFILCDHD-RDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRL 134 (430)
Q Consensus 57 ~~l~~~F~~~D~d-~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~ 134 (430)
++++++|+.||++ +||.|+.+|+..++..+++.....+++..+++.+ |.+++| |+++||+.++......
T Consensus 25 ~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~------D~d~~g~i~~~ef~~~~~~~~~~--- 95 (190)
T 1g8i_A 25 KEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVF------DENKDGRIEFSEFIQALSVTSRG--- 95 (190)
T ss_dssp HHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHH------CTTCSSEEEHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHH------hcCCCCeEeHHHHHHHHHHhcCC---
Confidence 3677788889988 9999999999999888765556778899999988 678889 9999999886532110
Q ss_pred hhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc----CCCC
Q 014101 135 ETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST----APEC 210 (430)
Q Consensus 135 ~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~----~~~~ 210 (430)
...+.++.+|+.||.|+||.|+.+||..++.. .+..
T Consensus 96 ----------------------------------------~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~ 135 (190)
T 1g8i_A 96 ----------------------------------------TLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNT 135 (190)
T ss_dssp ----------------------------------------CHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC---
T ss_pred ----------------------------------------CHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCc
Confidence 12345789999999999999999999998875 2211
Q ss_pred ---C-------CCCCcccccccccCCcccchhhHHhhhh
Q 014101 211 ---P-------WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 211 ---~-------~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+ .....+++.+|.|+||.|+++||...+.
T Consensus 136 ~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~ 174 (190)
T 1g8i_A 136 VELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 174 (190)
T ss_dssp --CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHH
T ss_pred cCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHH
Confidence 1 1123466789999999999999998754
No 204
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=99.61 E-value=3.5e-15 Score=138.55 Aligned_cols=138 Identities=13% Similarity=0.107 Sum_probs=89.5
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCC--CccceEEEEEEEcCCCeEEEEEEeCCC-----------hhHHH
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTP--TTDERYAVNVVDQPGGTKKTVVLREIP-----------EEAVA 348 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~--t~~~~~~~~~v~~~~~~~~~~i~d~~G-----------~e~~~ 348 (430)
....+||+|+|.+|||||||+|++++..+.....+ +.+.......+.+.+ ..+.+|||+| .+.+.
T Consensus 26 ~~~~~~i~lvG~~g~GKStlin~l~g~~~~~~~~~~~~~t~~~~~~~~~~~~--~~i~liDTpG~~~~~~~~~~~~~~~~ 103 (239)
T 3lxx_A 26 RNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKE--TELVVVDTPGIFDTEVPNAETSKEII 103 (239)
T ss_dssp --CEEEEEEECCTTSSHHHHHHHHHTSCCSCC-------CCSCEEEEEEETT--EEEEEEECCSCC-----CHHHHHHHH
T ss_pred CCCceEEEEECCCCCCHHHHHHHHcCCCcCccCCCCCceeeeEEEEEEEeCC--ceEEEEECCCccCCCCCHHHHHHHHH
Confidence 35678999999999999999999999988665544 444444445556553 5678999999 33444
Q ss_pred hhhccccccccccEEEEEEECCChhh--HHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc-Cc------HHHHHH
Q 014101 349 KLLSNKDSLAACDIAVFVHDSSDESS--WKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA-MA------IQDSTR 419 (430)
Q Consensus 349 ~~~~~~~~~~~ad~vilv~D~t~~~S--~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~-v~------~~~~~~ 419 (430)
... ...++.+|++++|+|+++..+ ...+..+...+.... ..|+++|+||+|+.... +. .+.+++
T Consensus 104 ~~~--~~~~~~~~~~l~v~d~~~~~~~~~~~l~~~~~~~~~~~-----~~~~iiv~nK~D~~~~~~~~~~i~~~~~~l~~ 176 (239)
T 3lxx_A 104 RCI--LLTSPGPHALLLVVPLGRYTEEEHKATEKILKMFGERA-----RSFMILIFTRKDDLGDTNLHDYLREAPEDIQD 176 (239)
T ss_dssp HHH--HHTTTCCSEEEEEEETTCCSSHHHHHHHHHHHHHHHHH-----GGGEEEEEECGGGC------------CHHHHH
T ss_pred HHH--HhcCCCCcEEEEEeeCCCCCHHHHHHHHHHHHHhhhhc-----cceEEEEEeCCccCCcccHHHHHHhchHHHHH
Confidence 444 455678999999999976443 222222322222211 46999999999987643 21 246788
Q ss_pred HHHHhCCcc
Q 014101 420 VFTFLVMVL 428 (430)
Q Consensus 420 ~~~~~g~~~ 428 (430)
++++.|..|
T Consensus 177 l~~~~~~~~ 185 (239)
T 3lxx_A 177 LMDIFGDRY 185 (239)
T ss_dssp HHHHHSSSE
T ss_pred HHHHcCCEE
Confidence 888888654
No 205
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=99.61 E-value=4.7e-16 Score=147.33 Aligned_cols=133 Identities=17% Similarity=0.111 Sum_probs=100.1
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHh------hhcccccc-
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAK------LLSNKDSL- 357 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~------~~~~~~~~- 357 (430)
.++|+++|++|||||||++++++..+.....++.+.+.....+.+.+ ..+.+||++|...+.. +. ..++
T Consensus 3 ~~~i~lvG~~g~GKTTL~n~l~g~~~~~~~~~~~t~~~~~~~~~~~~--~~~~l~DtpG~~~~~~~~~~~~~~--~~~~~ 78 (271)
T 3k53_A 3 LKTVALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYRE--KEFLVVDLPGIYSLTAHSIDELIA--RNFIL 78 (271)
T ss_dssp CEEEEEEECSSSSHHHHHHHHHTTCEEEEECTTSSCEEEEEEEEETT--EEEEEEECCCCSCCCSSCHHHHHH--HHHHH
T ss_pred eeEEEEECCCCCCHHHHHHHHhCCCcccCCCCCeEEEeeEEEEEECC--ceEEEEeCCCccccccCCHHHHHH--HHhhh
Confidence 57999999999999999999999987666667777777777777763 4588999999765544 22 3333
Q ss_pred -ccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 358 -AACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 358 -~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
.++|++++|+|+++.+ ....|+..+.... .+|+++|+||+|+.+.+........+++.+|++++
T Consensus 79 ~~~~d~vi~v~D~~~~~---~~~~~~~~~~~~~-----~~p~ilv~NK~Dl~~~~~~~~~~~~l~~~lg~~~~ 143 (271)
T 3k53_A 79 DGNADVIVDIVDSTCLM---RNLFLTLELFEME-----VKNIILVLNKFDLLKKKGAKIDIKKMRKELGVPVI 143 (271)
T ss_dssp TTCCSEEEEEEEGGGHH---HHHHHHHHHHHTT-----CCSEEEEEECHHHHHHHTCCCCHHHHHHHHSSCEE
T ss_pred ccCCcEEEEEecCCcch---hhHHHHHHHHhcC-----CCCEEEEEEChhcCcccccHHHHHHHHHHcCCcEE
Confidence 6899999999998753 3444555555442 38999999999987654332347888889998865
No 206
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.61 E-value=5.6e-17 Score=147.68 Aligned_cols=135 Identities=18% Similarity=0.189 Sum_probs=98.6
Q ss_pred HHHHHHHHHHhhcCC-CCCccCHHHHHHHHHHhcCCCC-CHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHc
Q 014101 55 CVRALKRIFILCDHD-RDGALSDAELNDFQVKCFNSPL-QPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEK 131 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d-~dG~is~~El~~~~~~~~g~~~-~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~ 131 (430)
..++++++|+.||.| +||.|+.+||..++.. +|..+ ..+++..+++.+ |.+++| |+|+||+.++.....
T Consensus 17 s~~ei~~~f~~fD~~~~~G~is~~El~~~l~~-~~~~~~~~~~~~~~f~~~------D~d~dG~I~~~Ef~~~~~~~~~- 88 (211)
T 2ggz_A 17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLGL-QGLNQKANKHIDQVYNTF------DTNKDGFVDFLEFIAAVNLIMQ- 88 (211)
T ss_dssp -------CCCSHHHHCTTSEEEHHHHHHHTTC-CSCCHHHHHHHHHHHHHH------CTTCSSEEEHHHHHHHHHHHSC-
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHH-hCCCcchHHHHHHHHHHH------cCCCCCeEeHHHHHHHHHHhcc-
Confidence 445778999999998 9999999999998654 34433 345688888888 778899 999999988652110
Q ss_pred CCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCC--
Q 014101 132 GRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPE-- 209 (430)
Q Consensus 132 ~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~-- 209 (430)
....+.++.+|+.||.|++|+|+.+||..++.....
T Consensus 89 ------------------------------------------~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~ 126 (211)
T 2ggz_A 89 ------------------------------------------EKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALN 126 (211)
T ss_dssp ------------------------------------------SSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSS
T ss_pred ------------------------------------------CchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhc
Confidence 012345889999999999999999999999875421
Q ss_pred --CCCC----CCcccccccccCCcccchhhHHhhhh
Q 014101 210 --CPWD----EAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 210 --~~~~----~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+.. ...+++.+|.|+||.|+++||+..+.
T Consensus 127 ~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 162 (211)
T 2ggz_A 127 GQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMA 162 (211)
T ss_dssp CCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 1111 23456789999999999999998765
No 207
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.60 E-value=3.9e-16 Score=139.34 Aligned_cols=164 Identities=13% Similarity=0.123 Sum_probs=112.6
Q ss_pred CccHHHHHHHHHHHHhhcCC-CCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHD-RDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d-~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
.++++ +++++|..||+| +||.|+.+||..++..++......+++..+++.+ |.+++| |+++||+.++..
T Consensus 21 ~~~~~---~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~------D~d~~g~i~~~Ef~~~~~~ 91 (193)
T 1bjf_A 21 DFTEH---EIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTF------DANGDGTIDFREFIIALSV 91 (193)
T ss_dssp SCCHH---HHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHH------CSSCSSEEEHHHHHHHHHH
T ss_pred CCCHH---HHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHH
Confidence 35555 567789999998 9999999999999776544444577789999998 778899 999999998765
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccC-CC-Ccc-c-CCCCCccccCH---HHHHHHHHHHHHhcCCCCCCCCHHHH
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELI-PY-SAF-K-RAPDQSVELTN---EAIDFLKGIFELFDADDDNSLRPIEV 200 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~-~~-~~~-~-~~~~~~~~~s~---~~~~~l~~~F~~fD~d~dG~is~~el 200 (430)
.......+.+..+|+.|+.|+++.|+.+.+ .+ ..+ . .+.. ..++. ...+.+.++|+.+|+|+||.|+.+||
T Consensus 92 ~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef 169 (193)
T 1bjf_A 92 TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSV--MKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169 (193)
T ss_dssp HTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCT--TTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHH
T ss_pred HcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccc--cCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHH
Confidence 533334466778899999999999987655 20 000 0 0100 01111 12345889999999999999999999
Q ss_pred HHhhccCCCCCCCCCcccccccccCCccc
Q 014101 201 EDLFSTAPECPWDEAPYKDAAEKTALGGL 229 (430)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~d~~~dg~i 229 (430)
..++...+. ...++ .+|.|+||.|
T Consensus 170 ~~~~~~~~~----~~~~~-~~D~~~dG~i 193 (193)
T 1bjf_A 170 IRGAKSDPS----IVRLL-QCDPSSAGQF 193 (193)
T ss_dssp HHHHHHCTH----HHHTT-CC--------
T ss_pred HHHHhcCHH----HHHHh-ccCCCCCCCC
Confidence 999975322 23466 8999999976
No 208
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.59 E-value=7.7e-16 Score=140.67 Aligned_cols=139 Identities=16% Similarity=0.143 Sum_probs=103.9
Q ss_pred cCCccHHHHHHHHHHHHhhcC-----CC-C--CccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC--cC
Q 014101 48 SQALKPRCVRALKRIFILCDH-----DR-D--GALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG--LT 117 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~-----d~-d--G~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g--i~ 117 (430)
...+|+.+++.|.++|..+|. |+ | |.|+.+||.. +.. +|..+..+ .|++.+ |.+++| |+
T Consensus 42 ~t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~-lg~~~~~~---~lf~~~------D~d~dG~~I~ 110 (214)
T 2l4h_A 42 LTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPE-LKANPFKE---RICRVF------STSPAKDSLS 110 (214)
T ss_dssp CCSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHH-HHTSTTHH---HHHHHH------CCSSSCCSEE
T ss_pred hCCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhc-cCCChHHH---HHHHHh------CcCCCCCEec
Confidence 346899999999999999999 66 6 9999999998 555 45555543 567776 556555 99
Q ss_pred HHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCH
Q 014101 118 LAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRP 197 (430)
Q Consensus 118 ~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~ 197 (430)
|+||+.++..+. + .....+.++.+|+.||.|+||+|+.
T Consensus 111 f~EF~~~~~~~~----------------------------~--------------~~~~~~~l~~~F~~~D~d~dG~Is~ 148 (214)
T 2l4h_A 111 FEDFLDLLSVFS----------------------------D--------------TATPDIKSHYAFRIFDFDDDGTLNR 148 (214)
T ss_dssp HHHHHHHHHHTS----------------------------S--------------CSCHHHHHHHHHHHHCTTCSSCBCH
T ss_pred HHHHHHHHHHHc----------------------------C--------------CCCHHHHHHHHHHHhCCCCCCcCCH
Confidence 999999864211 0 0012345889999999999999999
Q ss_pred HHHHHhhccCCC----CCCCCC-------cccccccccCCcccchhhHHhhhh
Q 014101 198 IEVEDLFSTAPE----CPWDEA-------PYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 198 ~el~~~~~~~~~----~~~~~~-------~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+||+.++...+. .+.... .+++.+|.|+||.|+|+||+..+.
T Consensus 149 ~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 201 (214)
T 2l4h_A 149 EDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 201 (214)
T ss_dssp HHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHH
T ss_pred HHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 999999875421 122222 267889999999999999998754
No 209
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=99.59 E-value=3.1e-15 Score=136.81 Aligned_cols=120 Identities=13% Similarity=0.016 Sum_probs=79.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcC-CCeEEEEEEeCCC----------hhHHHhhh
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQP-GGTKKTVVLREIP----------EEAVAKLL 351 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~-~~~~~~~i~d~~G----------~e~~~~~~ 351 (430)
...++|+|+|.+|||||||+++|++........++.+.+.......+. .....+.+|||+| .+.+..+.
T Consensus 27 ~~~~~i~v~G~~~~GKSslin~l~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~l~DtpG~~~~~~~~~~~~~~~~~~ 106 (223)
T 4dhe_A 27 TVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAEPVAHLVDLPGYGYAEVPGAAKAHWEQLL 106 (223)
T ss_dssp CCSCEEEEEESCHHHHHHHHHHHTTCSSSSCTTCCCCSCCCEEEEEESCTTSCSEEEEECCCCCSSCCCSTHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHhCCCcceeecCCCCcccceEEEEecCCCCCcEEEEcCCCCCcccCChhhHHHHHHHH
Confidence 456899999999999999999999987322221233222222233332 2346678999999 45555554
Q ss_pred cccccccc---ccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc
Q 014101 352 SNKDSLAA---CDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA 411 (430)
Q Consensus 352 ~~~~~~~~---ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~ 411 (430)
..+++. +|++++|+|+++..+. ....|+..+... ++|+++|+||+|+....
T Consensus 107 --~~~~~~~~~~d~vi~v~d~~~~~~~-~~~~~~~~l~~~------~~p~i~v~nK~Dl~~~~ 160 (223)
T 4dhe_A 107 --SSYLQTRPQLCGMILMMDARRPLTE-LDRRMIEWFAPT------GKPIHSLLTKCDKLTRQ 160 (223)
T ss_dssp --HHHHHHCTTEEEEEEEEETTSCCCH-HHHHHHHHHGGG------CCCEEEEEECGGGSCHH
T ss_pred --HHHHhcCcCcCEEEEEEeCCCCCCH-HHHHHHHHHHhc------CCCEEEEEeccccCChh
Confidence 344444 7889999999875332 223344444432 68999999999998743
No 210
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.59 E-value=4.7e-16 Score=138.46 Aligned_cols=138 Identities=14% Similarity=0.106 Sum_probs=103.4
Q ss_pred CccHHHHHHHHHHHHhhcCC-CCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHD-RDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d-~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
.+++++ ++++|+.||.+ +||.|+.+|+..++..+++...+.+++..+++.+ |.+++| |+++||+.++..
T Consensus 21 ~~~~~~---i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~------D~d~~G~i~~~ef~~~~~~ 91 (190)
T 1fpw_A 21 YFDRRE---IQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVF------DKDNNGFIHFEEFITVLST 91 (190)
T ss_dssp CSTHHH---HHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTC------CSSCSSEECHHHHHHHHHH
T ss_pred CCCHHH---HHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHH------CCCCCCcEeHHHHHHHHHH
Confidence 566665 55666777776 9999999999999888755555677788888887 778899 999999987642
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc-
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST- 206 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~- 206 (430)
.. . .. ..+.++.+|+.||.|+||.|+.+||..++..
T Consensus 92 ~~----------------~------------------------~~---~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~ 128 (190)
T 1fpw_A 92 TS----------------R------------------------GT---LEEKLSWAFELYDLNHDGYITFDEMLTIVASV 128 (190)
T ss_dssp HS----------------C------------------------CC---STHHHHHHHHHHCSSCSSEEEHHHHHHHHHHH
T ss_pred Hc----------------c------------------------CC---cHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 11 0 00 1134788999999999999999999998865
Q ss_pred ---CCCC---CC-------CCCcccccccccCCcccchhhHHhhhh
Q 014101 207 ---APEC---PW-------DEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 207 ---~~~~---~~-------~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+.. +. ....+++.+|.|+||.|+++||+..+.
T Consensus 129 ~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 174 (190)
T 1fpw_A 129 YKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK 174 (190)
T ss_dssp HTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHH
T ss_pred HHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 2211 11 112456789999999999999998754
No 211
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.59 E-value=1e-15 Score=163.62 Aligned_cols=132 Identities=14% Similarity=0.135 Sum_probs=101.1
Q ss_pred CccHHH-HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc-------CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHh
Q 014101 50 ALKPRC-VRALKRIFILCDHDRDGALSDAELNDFQVKCF-------NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAG 120 (430)
Q Consensus 50 ~lt~~~-~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~-------g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~e 120 (430)
.|++++ +++|+++|+.+| |+||.|+.+||..++..++ |..++.++++.|++.+ |.+++| |+|+|
T Consensus 524 ~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~------D~d~~G~I~f~E 596 (714)
T 3bow_A 524 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDML------DEDGSGKLGLKE 596 (714)
T ss_dssp CCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHH------CCSSCSSBCHHH
T ss_pred CCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHh------CCCCCCcCcHHH
Confidence 588888 999999999999 9999999999999988863 6789999999999998 778889 99999
Q ss_pred HHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHH
Q 014101 121 FLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEV 200 (430)
Q Consensus 121 Fl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el 200 (430)
|+.++... +.++.+|+.||+|+||.|+.+||
T Consensus 597 F~~l~~~~-------------------------------------------------~~l~~~F~~~D~d~dG~Is~~El 627 (714)
T 3bow_A 597 FYILWTKI-------------------------------------------------QKYQKIYREIDVDRSGTMNSYEM 627 (714)
T ss_dssp HHHHHHHH-------------------------------------------------HHHHHHHHHHCTTCCSSEEHHHH
T ss_pred HHHHHHHH-------------------------------------------------HHHHHHHHHhCCCCCCeECHHHH
Confidence 99986521 23566777777777777777777
Q ss_pred HHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhh
Q 014101 201 EDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 201 ~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
+.++...+... ...+.++..+| |+||.|+|+||+...
T Consensus 628 ~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l 666 (714)
T 3bow_A 628 RKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCL 666 (714)
T ss_dssp HHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHH
Confidence 77776543211 11234555667 777777777777664
No 212
>3gee_A MNME, tRNA modification GTPase MNME; G protein, cytoplasm, GTP- binding, hydrolase, magnesium, metal-binding, nucleotide- binding, potassium; HET: GDP FON; 2.95A {Chlorobium tepidum} PDB: 3gei_A*
Probab=99.57 E-value=7.3e-15 Score=149.52 Aligned_cols=122 Identities=21% Similarity=0.188 Sum_probs=72.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCC-CcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhh------cccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSD-NYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLL------SNKD 355 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~-~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~------~~~~ 355 (430)
+..++|+++|.+|||||||+|+|++..... ...++++.+.....+.+++ ..+.+|||+|.+.+.... ....
T Consensus 231 r~~~kV~ivG~~nvGKSSLln~L~~~~~a~vs~~~gtT~d~~~~~i~~~g--~~l~liDT~G~~~~~~~ve~~gi~~~~~ 308 (476)
T 3gee_A 231 SEGVSTVIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDK--TMFRLTDTAGLREAGEEIEHEGIRRSRM 308 (476)
T ss_dssp HHCEEEEEECCTTSSHHHHHHHCC------------------CEEEEETT--EEEEEEC--------------------C
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCCCCcccCCCCCceEEEEEEEEEECC--eEEEEEECCCCCcchhHHHHHHHHHHHh
Confidence 456899999999999999999999986432 3335555555556667663 568899999987655432 1245
Q ss_pred ccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc
Q 014101 356 SLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA 411 (430)
Q Consensus 356 ~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~ 411 (430)
+++.+|++++|+|++++.++.++..+...+.... ++|+++|+||+|+....
T Consensus 309 ~~~~aD~vl~VvD~s~~~s~~~~~~~~~~l~~l~-----~~piIvV~NK~Dl~~~~ 359 (476)
T 3gee_A 309 KMAEADLILYLLDLGTERLDDELTEIRELKAAHP-----AAKFLTVANKLDRAANA 359 (476)
T ss_dssp CCSSCSEEEEEEETTTCSSGGGHHHHHHHHHHCT-----TSEEEEEEECTTSCTTT
T ss_pred hcccCCEEEEEEECCCCcchhhhHHHHHHHHhcC-----CCCEEEEEECcCCCCcc
Confidence 7899999999999999888764433333333222 58999999999998753
No 213
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=99.57 E-value=1.3e-14 Score=139.47 Aligned_cols=116 Identities=22% Similarity=0.293 Sum_probs=81.4
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCc-CCCccceEEEEEEEcCCCeEEEEEEeCCChhH--------HHhhhcccc
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNY-TPTTDERYAVNVVDQPGGTKKTVVLREIPEEA--------VAKLLSNKD 355 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~-~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~--------~~~~~~~~~ 355 (430)
..+|+++|.+|||||||+|++++..+...+ .|.++.......+.. +...+.+|||+|... +.... ..
T Consensus 7 ~g~V~ivG~~nvGKSTLln~l~g~~~~ivs~~~~tTr~~i~~i~~~--~~~~l~l~DTpG~~~~~~~l~~~~~~~~--~~ 82 (301)
T 1wf3_A 7 SGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTE--GRRQIVFVDTPGLHKPMDALGEFMDQEV--YE 82 (301)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEEEEEE--TTEEEEEEECCCCCCCCSHHHHHHHHHH--HH
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCceeeecCCCCceeEEEEEEEEe--CCcEEEEecCccccchhhHHHHHHHHHH--HH
Confidence 357999999999999999999999886543 232222222222332 356788999999654 33333 57
Q ss_pred ccccccEEEEEEECCChhhHHHHHHHH-HHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 356 SLAACDIAVFVHDSSDESSWKRATELL-VEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 356 ~~~~ad~vilv~D~t~~~S~~~~~~~l-~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+++.+|++++|+|++++.+.. ..|+ ..+.... +++|+++|+||+|+...
T Consensus 83 ~l~~ad~il~VvD~~~~~~~~--~~~i~~~l~~~~----~~~p~ilV~NK~Dl~~~ 132 (301)
T 1wf3_A 83 ALADVNAVVWVVDLRHPPTPE--DELVARALKPLV----GKVPILLVGNKLDAAKY 132 (301)
T ss_dssp HTSSCSEEEEEEETTSCCCHH--HHHHHHHHGGGT----TTSCEEEEEECGGGCSS
T ss_pred HHhcCCEEEEEEECCCCCChH--HHHHHHHHHhhc----CCCCEEEEEECcccCCc
Confidence 889999999999999764443 3454 3444332 26899999999999763
No 214
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.56 E-value=3e-15 Score=140.69 Aligned_cols=182 Identities=14% Similarity=0.108 Sum_probs=129.5
Q ss_pred CccHHHHHHH-HHHHHhhcCCCCCccCHHHHHHHH----------HHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cC
Q 014101 50 ALKPRCVRAL-KRIFILCDHDRDGALSDAELNDFQ----------VKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LT 117 (430)
Q Consensus 50 ~lt~~~~~~l-~~~F~~~D~d~dG~is~~El~~~~----------~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~ 117 (430)
.+++.+++.+ .++|..+|.|+||.|+.+|+..++ .+..+...+.+++..++..+ |.+++| |+
T Consensus 49 ~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~------D~d~~G~i~ 122 (272)
T 2be4_A 49 KITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKY------DADSSGYIS 122 (272)
T ss_dssp CCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCHHHHHHHHHHHHSCCCCHHHHHHHHHHH------CTTCCSEEE
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhhhHHHHHHHhhccCcccHHHHHHHHHHh------CCCCCCccC
Confidence 4567776655 467899999999999999999882 22345667888899999888 778899 99
Q ss_pred HHhHHHHHHHHHHc----CCchhH---H-HHHHhhcCCCCcccccccC-CCCcccCCCCC--ccc----cCHHHHHHHHH
Q 014101 118 LAGFLFLHALFIEK----GRLETT---W-TVLRKFGYNNDIKLADELI-PYSAFKRAPDQ--SVE----LTNEAIDFLKG 182 (430)
Q Consensus 118 ~~eFl~~~~~~~~~----~~~~~~---w-~~l~~~~y~~~l~~~~~~~-~~~~~~~~~~~--~~~----~s~~~~~~l~~ 182 (430)
.+||..++...... ...+.+ | .+++.++.|+++.|+.+.+ . .+...+.. ... ......+.++.
T Consensus 123 ~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (272)
T 2be4_A 123 AAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLAR--ILALQENFLLQFKMDASSQVERKRDFEK 200 (272)
T ss_dssp GGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGG--GSCCSSCSSTTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHH--HHhhhHHHHhhhhhhhccccccHHHHHH
Confidence 99999988765422 222332 2 4799999999999986554 2 11110000 000 01123456899
Q ss_pred HHHHhcCCCCCCCCHHHHHHhhccCCC---CCCCC---Cc----ccccccccCCcccchhhHHhhhh
Q 014101 183 IFELFDADDDNSLRPIEVEDLFSTAPE---CPWDE---AP----YKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 183 ~F~~fD~d~dG~is~~el~~~~~~~~~---~~~~~---~~----~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+|+.||+||||.|+.+||+.++...+. .+... .. ++..+|.|+||.|+|+||+....
T Consensus 201 ~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~~~~~ 267 (272)
T 2be4_A 201 IFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLG 267 (272)
T ss_dssp HHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHHHHTT
T ss_pred HHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 999999999999999999999865321 11121 12 67889999999999999998754
No 215
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.56 E-value=2.2e-15 Score=141.34 Aligned_cols=138 Identities=12% Similarity=0.230 Sum_probs=105.5
Q ss_pred CccHHHHHHHHHHHHhhcCC-CCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHD-RDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d-~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
.+++++++ ++|+.||.+ +||.|+.+||..++..+++...+..++..+++.+ |.+++| |+|+||+.++..
T Consensus 87 ~~s~~ei~---~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~------D~d~dG~I~~~Ef~~~l~~ 157 (256)
T 2jul_A 87 KFTKKELQ---SLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAF------DADGNGAIHFEDFVVGLSI 157 (256)
T ss_dssp TSCHHHHH---HHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHS------SCSCCSEECSHHHHHHHHH
T ss_pred CCCHHHHH---HHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHh------ccCCCCcCcHHHHHHHHHH
Confidence 35666555 455566554 8999999999999988877778888999999998 788899 999999998653
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
... ....+.++.+|+.||.|+||+|+.+||..++...
T Consensus 158 ~~~-------------------------------------------~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~ 194 (256)
T 2jul_A 158 LLR-------------------------------------------GTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSI 194 (256)
T ss_dssp HHS-------------------------------------------CCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHH
T ss_pred Hhc-------------------------------------------cChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 210 0123458899999999999999999999988642
Q ss_pred ----CCC--C-C-------CCCcccccccccCCcccchhhHHhhhh
Q 014101 208 ----PEC--P-W-------DEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 208 ----~~~--~-~-------~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+.. + . ....+++.+|.|+||.|+++||+..+.
T Consensus 195 ~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~ 240 (256)
T 2jul_A 195 YDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ 240 (256)
T ss_dssp HHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHH
T ss_pred HHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 211 1 1 113466789999999999999998754
No 216
>1lnz_A SPO0B-associated GTP-binding protein; GTPase, OBG, stringent factor, stress response, sporulation, large G-protein, structural genomics, PSI; HET: G4P; 2.60A {Bacillus subtilis} SCOP: b.117.1.1 c.37.1.8
Probab=99.55 E-value=8.4e-15 Score=142.96 Aligned_cols=135 Identities=18% Similarity=0.069 Sum_probs=96.9
Q ss_pred eEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhH----HHhhh-ccccccccc
Q 014101 286 FQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEA----VAKLL-SNKDSLAAC 360 (430)
Q Consensus 286 ~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~----~~~~~-~~~~~~~~a 360 (430)
.+|+++|.+|||||||++++++........+..+.......+.+++ ...+.+||++|... +..+. .....++.+
T Consensus 159 a~V~lvG~~nvGKSTLln~L~~~~~~i~~~~ftTl~p~~g~v~~~~-~~~~~l~DtPG~i~~a~~~~~l~~~fl~~i~~~ 237 (342)
T 1lnz_A 159 ADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDD-GRSFVMADLPGLIEGAHQGVGLGHQFLRHIERT 237 (342)
T ss_dssp CCEEEESSTTSSHHHHHHHSEEECCEESSTTSSCCCCCEEEEECSS-SCEEEEEEHHHHHHHTTCTTTTHHHHHHHHHHC
T ss_pred CeeeeeCCCCCCHHHHHHHHHcCCCccccCCccccCceEEEEEeCC-CceEEEecCCCCcccccccchhHHHHHHHHHhc
Confidence 4689999999999999999998875443334333334445577763 35678999999643 11121 001234569
Q ss_pred cEEEEEEECCC---hhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhC
Q 014101 361 DIAVFVHDSSD---ESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLV 425 (430)
Q Consensus 361 d~vilv~D~t~---~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g 425 (430)
+++++|+|+++ +++++.+..|+.++..+.... .++|+++|+||+|+... .+..+++++.++
T Consensus 238 d~ll~VvD~s~~~~~~~~~~~~~~~~eL~~~~~~l-~~~p~ilV~NK~Dl~~~---~e~~~~l~~~l~ 301 (342)
T 1lnz_A 238 RVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRL-TERPQIIVANKMDMPEA---AENLEAFKEKLT 301 (342)
T ss_dssp CEEEEEEESSCSSCCCHHHHHHHHHHHHHHSCSST-TTSCBCBEEECTTSTTH---HHHHHHHHHHCC
T ss_pred cEEEEEEECCcccccChHHHHHHHHHHHHHhhhhh-cCCCEEEEEECccCCCC---HHHHHHHHHHhh
Confidence 99999999998 789999999999998864321 27899999999999863 245677777765
No 217
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=99.54 E-value=1.8e-14 Score=134.63 Aligned_cols=141 Identities=12% Similarity=0.012 Sum_probs=86.9
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCcc--ceEEEEEEEcCCCeEEEEEEeCCCh--------hH-HHhhh
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTD--ERYAVNVVDQPGGTKKTVVLREIPE--------EA-VAKLL 351 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~--~~~~~~~v~~~~~~~~~~i~d~~G~--------e~-~~~~~ 351 (430)
...++|+++|.+|||||||+|++++........++.+ .......+... ...+.+|||+|. +. ...+.
T Consensus 19 ~~~l~I~lvG~~g~GKSSlin~l~~~~~~~~~~~~~~~T~~~~~~~~~~~--~~~i~liDTPG~~~~~~~~~~~~~~~i~ 96 (247)
T 3lxw_A 19 ESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTGSRRWD--KCHVEVVDTPDIFSSQVSKTDPGCEERG 96 (247)
T ss_dssp -CEEEEEEESSTTSSHHHHHHHHHTSCCC---------CCSCEEEEEEET--TEEEEEEECCSCSSTTHHHHSTTSHHHH
T ss_pred CCceEEEEECCCCCcHHHHHHHHhCCCCccccCCCCCccccEEEEEEEEC--CcEEEEEECCCCCCCCCCcHHHHHHHHH
Confidence 4568999999999999999999999887655433322 22333344444 356789999994 22 22221
Q ss_pred cc-ccccccccEEEEEEECCChhhH-HHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCc-------HHHHHHHHH
Q 014101 352 SN-KDSLAACDIAVFVHDSSDESSW-KRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMA-------IQDSTRVFT 422 (430)
Q Consensus 352 ~~-~~~~~~ad~vilv~D~t~~~S~-~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~-------~~~~~~~~~ 422 (430)
.. ....+.+|++++|+|+++.... ..+.+++..+..... .+.|+|||+||+|+.+.... .+..+++.+
T Consensus 97 ~~~~~~~~~~d~il~V~d~~~~~~~~~~~~~~l~~~~~~~~---~~~~iilv~nK~Dl~~~~~~~~l~~~~~~~l~~l~~ 173 (247)
T 3lxw_A 97 HCYLLSAPGPHALLLVTQLGRFTAQDQQAVRQVRDMFGEDV---LKWMVIVFTRKEDLAGGSLHDYVSNTENRALRELVA 173 (247)
T ss_dssp HHHHHHTTCCSEEEEEEETTBCCHHHHHHHHHHHHHHCGGG---GGGEEEEEECGGGGTTCCHHHHHHHCCCHHHHHHHH
T ss_pred HHHHhcCCCCCEEEEEEeCCCCCHHHHHHHHHHHHHhChhh---hccEEEEEEchHhcCCCCHHHHHhhcccHHHHHHHH
Confidence 00 1223899999999999853222 233445554432211 15799999999999764221 145678888
Q ss_pred HhCCcc
Q 014101 423 FLVMVL 428 (430)
Q Consensus 423 ~~g~~~ 428 (430)
..|..|
T Consensus 174 ~~g~~~ 179 (247)
T 3lxw_A 174 ECGGRV 179 (247)
T ss_dssp HTTTCE
T ss_pred HcCCeE
Confidence 877654
No 218
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=99.54 E-value=1.2e-14 Score=146.96 Aligned_cols=119 Identities=17% Similarity=0.130 Sum_probs=86.0
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCC-CcCCCccceEEEEEEEcCCCeEEEEEEeCCCh----------hHHHhhh
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSD-NYTPTTDERYAVNVVDQPGGTKKTVVLREIPE----------EAVAKLL 351 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~-~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~----------e~~~~~~ 351 (430)
...+||+++|.+|||||||+|++++..+.. ...++++.+.....+..++ ..+.+|||+|. +.|..+.
T Consensus 173 ~~~~ki~lvG~~nvGKSSLin~l~~~~~~~~~~~~gtT~d~~~~~~~~~~--~~~~l~DT~G~~~~~~~~~~~e~~~~~~ 250 (436)
T 2hjg_A 173 EEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQ--QEFVIVDTAGMRKKGKVYETTEKYSVLR 250 (436)
T ss_dssp TTCEEEEEECSTTSSHHHHHHHHHTSTTEEEC---------CCEEEEETT--EEEEETTHHHHTCBTTBCCCCSHHHHHH
T ss_pred ccCcEEEEEcCCCCCHHHHHHHHhCCCceeecCCCCceeeeeEEEEEECC--eEEEEEECCCcCcCccccchHHHHHHHH
Confidence 356899999999999999999999988652 3335555555445666663 35789999997 5565443
Q ss_pred ccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc
Q 014101 352 SNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA 411 (430)
Q Consensus 352 ~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~ 411 (430)
...+++.+|++++|+|+++..+++.. .|+..+... ++|+++|+||+|+.+..
T Consensus 251 -~~~~~~~ad~~llv~D~~~~~s~~~~-~~~~~~~~~------~~~iiiv~NK~Dl~~~~ 302 (436)
T 2hjg_A 251 -ALKAIDRSEVVAVVLDGEEGIIEQDK-RIAGYAHEA------GKAVVIVVNKWDAVDKD 302 (436)
T ss_dssp -HHHHHHHCSEEEEEEETTTCCCHHHH-HHHHHHHHT------TCEEEEEEECGGGSCCC
T ss_pred -HHHHHHhCCEEEEEEcCCcCCcHHHH-HHHHHHHHc------CCcEEEEEECccCCCcc
Confidence 13577899999999999998888775 466666543 68999999999998753
No 219
>3qq5_A Small GTP-binding protein; hydrogenase, H-cluster, HYDA maturation, GTP-binding domain, maturation enzyme, oxidoreductase; 2.99A {Thermotoga neapolitana}
Probab=99.51 E-value=5.9e-15 Score=147.83 Aligned_cols=136 Identities=15% Similarity=0.107 Sum_probs=94.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCC-cCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhh-----ccccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDN-YTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLL-----SNKDS 356 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~-~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~-----~~~~~ 356 (430)
...++|+|+|.+|+|||||++++++..+... ..++++.+.....+.+.+ ...+.+|||+|.+.+..+. ....+
T Consensus 32 ~~~~kI~IvG~~~vGKSTLin~L~~~~~~~~~~~~gtT~d~~~~~~~~~~-~~~l~liDTpG~~d~~~l~~~~~~~~~~~ 110 (423)
T 3qq5_A 32 GFRRYIVVAGRRNVGKSSFMNALVGQNVSIVSDYAGTTTDPVYKSMELHP-IGPVTLVDTPGLDDVGELGRLRVEKARRV 110 (423)
T ss_dssp CCCEEEEEECSCSTTTTTTTTSSCC-------------CCCCEEEEEETT-TEEEEEEECSSTTCCCTTCCCCHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHcCCCCccCCCCCeeeeeEEEEEEECC-CCeEEEEECcCCCcccchhHHHHHHHHHH
Confidence 4568999999999999999999999887432 234455555556677763 3478899999987665442 11357
Q ss_pred cccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 357 LAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 357 ~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
++.+|++++|+|++.. .....|+..+... ++|+++|+||+|+...... +.++++++.++++++
T Consensus 111 l~~aD~vllVvD~~~~---~~~~~~l~~l~~~------~~piIvV~NK~Dl~~~~~~-~~~~~l~~~~g~~v~ 173 (423)
T 3qq5_A 111 FYRADCGILVTDSAPT---PYEDDVVNLFKEM------EIPFVVVVNKIDVLGEKAE-ELKGLYESRYEAKVL 173 (423)
T ss_dssp HTSCSEEEEECSSSCC---HHHHHHHHHHHHT------TCCEEEECCCCTTTTCCCT-HHHHHSSCCTTCCCC
T ss_pred HhcCCEEEEEEeCCCh---HHHHHHHHHHHhc------CCCEEEEEeCcCCCCccHH-HHHHHHHHHcCCCEE
Confidence 7899999999999433 3345666666654 5899999999999886543 677788888887765
No 220
>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural G NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii}
Probab=99.50 E-value=2.4e-13 Score=133.79 Aligned_cols=138 Identities=14% Similarity=0.120 Sum_probs=98.9
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHH---------hhhcc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVA---------KLLSN 353 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~---------~~~~~ 353 (430)
...++|+++|.+|||||||++++.+........+..+.......+... ...+.+|||+|..... ...
T Consensus 165 ~~~~~v~lvG~~gvGKSTLin~L~~~~~~~~~~~~~t~~~~~~~~~~~--~~~~~l~Dt~G~~~~~~~~~~~~~~~~~-- 240 (357)
T 2e87_A 165 LEIPTVVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFEDG--YFRYQIIDTPGLLDRPISERNEIEKQAI-- 240 (357)
T ss_dssp SSSCEEEEECSTTSSHHHHHHHHCSSCCEEECCTTCSSCEEEEEEEET--TEEEEEEECTTTSSSCSTTSCHHHHHHH--
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCccCCCCCeeeceeEEEEEec--CceEEEEeCCCccccchhhhhHHHHHHH--
Confidence 456899999999999999999999987544333444444444444444 3568899999974321 111
Q ss_pred ccccccccEEEEEEECCChh--hHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCccc
Q 014101 354 KDSLAACDIAVFVHDSSDES--SWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 354 ~~~~~~ad~vilv~D~t~~~--S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~f 429 (430)
......+|++++|+|++++. ++.....|+..+..... +.|+++|+||+|+..... .+++.++++..+++++
T Consensus 241 ~~~~~~ad~illV~D~s~~~~~~~~~~~~~~~~i~~~~~----~~piilV~NK~Dl~~~~~-~~~~~~~~~~~~~~~~ 313 (357)
T 2e87_A 241 LALRYLGNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEFK----DLPFLVVINKIDVADEEN-IKRLEKFVKEKGLNPI 313 (357)
T ss_dssp HGGGGTCSEEEEEECTTCTTSSCHHHHHHHHHHHHHHTT----TSCEEEEECCTTTCCHHH-HHHHHHHHHHTTCCCE
T ss_pred HHHHhcCCEEEEEEeCCccccCCHHHHHHHHHHHHHhcC----CCCEEEEEECcccCChHH-HHHHHHHHHhcCCCeE
Confidence 13445699999999999877 78888889988876532 589999999999987432 2456677777777654
No 221
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=99.50 E-value=2.4e-13 Score=127.64 Aligned_cols=139 Identities=12% Similarity=0.070 Sum_probs=86.9
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCC-CCCcCCC-ccceEEEEEEEcCCCeEEEEEEeCCChhHHHhh--------h-
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPF-SDNYTPT-TDERYAVNVVDQPGGTKKTVVLREIPEEAVAKL--------L- 351 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~-~~~~~~t-~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~--------~- 351 (430)
...++|+|+|.+|||||||++++++... .....++ ++.......+.+.+ ..+.+|||+|...+... .
T Consensus 20 ~~~~~I~lvG~~g~GKStl~n~l~~~~~~~~~~~~~~~t~~~~~~~~~~~~--~~i~iiDTpG~~~~~~~~~~~~~~i~~ 97 (260)
T 2xtp_A 20 RSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGN--REIVIIDTPDMFSWKDHCEALYKEVQR 97 (260)
T ss_dssp -CCEEEEEEECTTSCHHHHHHHHHTSCCSCCCTTSCCCCCSCEEEEEEETT--EEEEEEECCGGGGSSCCCHHHHHHHHH
T ss_pred CCceEEEEECCCCCCHHHHHHHHhCCCCcccCCCCCceeeeeEEEEEEeCC--CEEEEEECcCCCCCCCCHHHHHHHHHH
Confidence 4568999999999999999999998874 3333343 44444444555553 56889999997543211 0
Q ss_pred ccccccccccEEEEEEECCChhhH-HHHHHHHHHHHhcCCCCCCCCcEEEEEe-CCCCCCccCcH-------HHHHHHHH
Q 014101 352 SNKDSLAACDIAVFVHDSSDESSW-KRATELLVEVASYGEDTGFEVPCLIVAA-KDDLDSFAMAI-------QDSTRVFT 422 (430)
Q Consensus 352 ~~~~~~~~ad~vilv~D~t~~~S~-~~~~~~l~~l~~~~~~~~~~~PiilVgn-K~Dl~~~~v~~-------~~~~~~~~ 422 (430)
....+++.+|++++|+|+++.... ..+..|+..+.... ...|+++|+| |+|+....... .++.++++
T Consensus 98 ~~~~~~~~~d~il~V~d~~~~~~~~~~~~~~l~~~~~~~----~~~~~i~vv~nK~Dl~~~~~~~~i~~~~~~~~~~~~~ 173 (260)
T 2xtp_A 98 CYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGED----AMGHTIVLFTHKEDLNGGSLMDYMHDSDNKALSKLVA 173 (260)
T ss_dssp HHHHHTTCCSEEEEEEETTCCCHHHHHHHHHHHHHHCGG----GGGGEEEEEECGGGGTTCCHHHHHHHCCCHHHHHHHH
T ss_pred HHHhcCCCCcEEEEEEeCCCCCHHHHHHHHHHHHHhCch----hhccEEEEEEcccccCCccHHHHHHhcchHHHHHHHH
Confidence 002367899999999999863322 23444555543221 1245555555 99998643222 34556777
Q ss_pred HhCCc
Q 014101 423 FLVMV 427 (430)
Q Consensus 423 ~~g~~ 427 (430)
.++..
T Consensus 174 ~~~~~ 178 (260)
T 2xtp_A 174 ACGGR 178 (260)
T ss_dssp HTTTC
T ss_pred HhCCe
Confidence 76643
No 222
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=99.50 E-value=1.1e-13 Score=130.78 Aligned_cols=125 Identities=11% Similarity=0.056 Sum_probs=80.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhh-------hcccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKL-------LSNKD 355 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~-------~~~~~ 355 (430)
...++|+++|.+|||||||+|++++..+.... ++.+.+.....+.+......+.+|||+|.+.+... +....
T Consensus 37 ~~~~~I~vvG~~g~GKSSLin~l~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~l~iiDTpG~~~~~~~~~~~~~~i~~~~ 115 (270)
T 1h65_A 37 VNSLTILVMGKGGVGKSSTVNSIIGERVVSIS-PFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFL 115 (270)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHHHTSCCSCCC-SSSCCCSSCEEEEEEETTEEEEEEECCCSEETTEECHHHHHHHHHHT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHhCCCccccc-CCCCcceeeEEEEEeeCCeEEEEEECCCCCCCccchHHHHHHHHHHh
Confidence 45789999999999999999999998864333 22222221122222223467889999997554321 10011
Q ss_pred ccccccEEEEEEECCChhhHHH-HHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 356 SLAACDIAVFVHDSSDESSWKR-ATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 356 ~~~~ad~vilv~D~t~~~S~~~-~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
..+.+|++++|+|++.. ++.. ...|+..+....+.. ...|+++|+||+|+...
T Consensus 116 ~~~~~d~il~v~~~d~~-~~~~~~~~~~~~l~~~~~~~-~~~~iivV~nK~Dl~~~ 169 (270)
T 1h65_A 116 LDKTIDVLLYVDRLDAY-RVDNLDKLVAKAITDSFGKG-IWNKAIVALTHAQFSPP 169 (270)
T ss_dssp TTCEECEEEEEEESSCC-CCCHHHHHHHHHHHHHHCGG-GGGGEEEEEECCSCCCG
T ss_pred hcCCCCEEEEEEeCCCC-cCCHHHHHHHHHHHHHhCcc-cccCEEEEEECcccCCc
Confidence 23579999999998753 3443 346776665542210 12699999999999764
No 223
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.50 E-value=8.3e-15 Score=160.47 Aligned_cols=136 Identities=14% Similarity=0.227 Sum_probs=110.5
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...+++.++..++++|+.||+|+||.|+.+||..++.. +|..++++++..++..+ |.+++| |+|+||+.++.
T Consensus 716 ~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~~~~~~~~~~------D~d~dG~I~~~EF~~~~~ 788 (863)
T 1sjj_A 716 AKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLIS-MGYNMGEAEFARIMSIV------DPNRMGVVTFQAFIDFMS 788 (863)
T ss_dssp CCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHH-HTCCCCTHHHHHHHHHH------CTTSCSEEETTHHHHTHH
T ss_pred ccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-cCCCCCHHHHHHHHHHh------CCCCCCcCcHHHHHHHHH
Confidence 35678889999999999999999999999999999776 48889999999999998 678899 99999998864
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
..... . ...+.++.+|+.| .||+|+|+.+||+.+++
T Consensus 789 ~~~~~-----------------------------------~-------~~~~~l~~aF~~~-~d~~G~Is~~El~~~l~- 824 (863)
T 1sjj_A 789 RETAD-----------------------------------T-------DTADQVMASFKIL-AGDKNYITVDELRRELP- 824 (863)
T ss_dssp HHSTT-----------------------------------C-------SSSHHHHHHHHGG-GTSSSEEEHHHHHHHSC-
T ss_pred HHhcC-----------------------------------C-------CCHHHHHHHHHHH-hCCCCcCcHHHHHHHCC-
Confidence 21100 0 0113478999999 89999999999999985
Q ss_pred CCCCCCCCCccccccccc-----CCcccchhhHHhhh
Q 014101 207 APECPWDEAPYKDAAEKT-----ALGGLSLDGFLSEW 238 (430)
Q Consensus 207 ~~~~~~~~~~~~~~~d~~-----~dg~i~~~ef~~~w 238 (430)
+.....+++.+|.+ +||.|+|+||+..+
T Consensus 825 ----~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~ 857 (863)
T 1sjj_A 825 ----PDQAEYCIARMAPYNGRDAVPGALDYMSFSTAL 857 (863)
T ss_dssp ----HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHH
T ss_pred ----HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHH
Confidence 22224466777776 79999999999874
No 224
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=99.49 E-value=9.9e-14 Score=140.38 Aligned_cols=111 Identities=16% Similarity=0.204 Sum_probs=74.4
Q ss_pred eEEEEeCCCCCCHHHHHHHHhCCCCCC-CcCCCccceEEEEEEEcCCCeEEEEEEeCCChhH---------HHhhhcccc
Q 014101 286 FQCFVFGPKKAGKSVLLNSFLGRPFSD-NYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEA---------VAKLLSNKD 355 (430)
Q Consensus 286 ~kI~vvG~~~vGKSSLi~~l~~~~~~~-~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~---------~~~~~~~~~ 355 (430)
.+|+++|.+|||||||+|+|++..... ...|+++.+.....+.+.+ ..+.+|||+|.+. +.... ..
T Consensus 2 ~~v~ivG~pnvGKStL~nrl~~~~~~~v~~~~g~T~d~~~~~~~~~~--~~~~l~DT~G~~~~~~~~~~~~~~~~~--~~ 77 (439)
T 1mky_A 2 ATVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYG--KTFKLVDTCGVFDNPQDIISQKMKEVT--LN 77 (439)
T ss_dssp CEEEEECCTTSSHHHHHHHHHC--------------CCSEEEEEETT--EEEEEEECTTTTSSGGGCCCHHHHHHH--HH
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCCceecCCCCCccceeeEEEEECC--eEEEEEECCCccccccchHHHHHHHHH--HH
Confidence 489999999999999999999987653 3335555566666777774 3578899999653 23333 56
Q ss_pred ccccccEEEEEEECCChhhHH--HHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC
Q 014101 356 SLAACDIAVFVHDSSDESSWK--RATELLVEVASYGEDTGFEVPCLIVAAKDDLDS 409 (430)
Q Consensus 356 ~~~~ad~vilv~D~t~~~S~~--~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~ 409 (430)
+++.+|++++|+|+++.-+.. .+..|+.. . ++|+++|+||+|+..
T Consensus 78 ~~~~ad~il~V~D~~~~~~~~d~~i~~~l~~----~-----~~p~ilv~NK~D~~~ 124 (439)
T 1mky_A 78 MIREADLVLFVVDGKRGITKEDESLADFLRK----S-----TVDTILVANKAENLR 124 (439)
T ss_dssp HHTTCSEEEEEEETTTCCCHHHHHHHHHHHH----H-----TCCEEEEEESCCSHH
T ss_pred HHHhCCEEEEEEECCCCCCHHHHHHHHHHHH----c-----CCCEEEEEeCCCCcc
Confidence 789999999999998754443 23334332 1 589999999999864
No 225
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=99.49 E-value=4.8e-14 Score=143.39 Aligned_cols=132 Identities=15% Similarity=0.129 Sum_probs=91.9
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCC-CCcCCCccceEEEEEEEcCCCeEEEEEEeCCC----------hhHHHhhh
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFS-DNYTPTTDERYAVNVVDQPGGTKKTVVLREIP----------EEAVAKLL 351 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~-~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G----------~e~~~~~~ 351 (430)
...+||+++|.+|||||||+++|++.... ....++++.+.....+..++ ..+.+|||+| ++.+..+.
T Consensus 193 ~~~~ki~ivG~~~vGKSslin~l~~~~~~~~~~~~gtt~~~~~~~~~~~~--~~~~l~DT~G~~~~~~~~~~~e~~~~~~ 270 (456)
T 4dcu_A 193 EEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQ--QEFVIVDTAGMRKKGKVYETTEKYSVLR 270 (456)
T ss_dssp TTCEEEEEECSTTSSHHHHHHHHHTSTTEEECC------CTTSEEEEETT--EEEEETTGGGTTTBTTBCCCCSHHHHHH
T ss_pred cccceeEEecCCCCCHHHHHHHHhCCCccccCCCCCeEEEEEEEEEEECC--ceEEEEECCCCCcCcccchHHHHHHHHH
Confidence 45689999999999999999999987633 22334444444445566663 3788999999 67777654
Q ss_pred ccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cCcHHHHHHHHHHh
Q 014101 352 SNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AMAIQDSTRVFTFL 424 (430)
Q Consensus 352 ~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v~~~~~~~~~~~~ 424 (430)
...+++.+|++++|+|+++.-+ .....|+..+... +.|+|+|+||+|+.+. .+..+++.+.+++.
T Consensus 271 -~~~~~~~ad~~llviD~~~~~~-~~~~~~~~~~~~~------~~~~ilv~NK~Dl~~~~~~~~~~~~~~~~~~ 336 (456)
T 4dcu_A 271 -ALKAIDRSEVVAVVLDGEEGII-EQDKRIAGYAHEA------GKAVVIVVNKWDAVDKDESTMKEFEENIRDH 336 (456)
T ss_dssp -HHHHHHHCSEEEEEEETTTCCC-HHHHHHHHHHHHT------TCEEEEEEECGGGSCCCSSHHHHHHHHHHHH
T ss_pred -HHHHHhhCCEEEEEEeCCCCcC-HHHHHHHHHHHHc------CCCEEEEEEChhcCCCchHHHHHHHHHHHHh
Confidence 1357889999999999987433 2334455555442 6899999999999874 35567777777665
No 226
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=99.48 E-value=1.2e-13 Score=132.83 Aligned_cols=132 Identities=17% Similarity=0.249 Sum_probs=87.5
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCc-CCCccceEEEEEEEcCCCeEEEEEEeCCChh-HHHh-----h-hccccc
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNY-TPTTDERYAVNVVDQPGGTKKTVVLREIPEE-AVAK-----L-LSNKDS 356 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~-~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e-~~~~-----~-~~~~~~ 356 (430)
..+|+++|++|||||||+|++++..+...+ .+..+.......+... ...+.+|||+|.. .... + .....+
T Consensus 8 ~~~VaIvG~~nvGKSTLln~L~g~~~~i~s~~~~tTr~~~~gi~~~~--~~~i~~iDTpG~~~~~~~~l~~~~~~~~~~~ 85 (301)
T 1ega_A 8 CGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEG--AYQAIYVDTPGLHMEEKRAINRLMNKAASSS 85 (301)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHTCSEEECCCCSSCCSSCEEEEEEET--TEEEEEESSSSCCHHHHHHHHHHHTCCTTSC
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCccccCCCCCcceeeEEEEEEEC--CeeEEEEECcCCCccchhhHHHHHHHHHHHH
Confidence 348999999999999999999998865433 2222222222233333 4577899999986 2211 1 112567
Q ss_pred cccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC-ccCcHHHHHHHHHHhCC
Q 014101 357 LAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDS-FAMAIQDSTRVFTFLVM 426 (430)
Q Consensus 357 ~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~-~~v~~~~~~~~~~~~g~ 426 (430)
++.+|++++|+|+++ +.....|+.+..... +.|+++|+||+|+.. .....+.+.++++.++.
T Consensus 86 l~~~D~vl~Vvd~~~---~~~~~~~i~~~l~~~-----~~P~ilvlNK~D~~~~~~~~~~~l~~l~~~~~~ 148 (301)
T 1ega_A 86 IGDVELVIFVVEGTR---WTPDDEMVLNKLREG-----KAPVILAVNKVDNVQEKADLLPHLQFLASQMNF 148 (301)
T ss_dssp CCCEEEEEEEEETTC---CCHHHHHHHHHHHSS-----SSCEEEEEESTTTCCCHHHHHHHHHHHHTTSCC
T ss_pred HhcCCEEEEEEeCCC---CCHHHHHHHHHHHhc-----CCCEEEEEECcccCccHHHHHHHHHHHHHhcCc
Confidence 899999999999976 333334554433322 689999999999987 33334566777776664
No 227
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=99.48 E-value=4.2e-14 Score=143.01 Aligned_cols=113 Identities=12% Similarity=0.132 Sum_probs=72.5
Q ss_pred eEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccce--EEEEEEEcCCCeEEEEEEeCCChh--------HHHhhhcccc
Q 014101 286 FQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDER--YAVNVVDQPGGTKKTVVLREIPEE--------AVAKLLSNKD 355 (430)
Q Consensus 286 ~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~--~~~~~v~~~~~~~~~~i~d~~G~e--------~~~~~~~~~~ 355 (430)
.+|+++|.+|||||||+|+|++..+.... ++.|.+ .....+.+. ...+.+|||+|.+ .+.... ..
T Consensus 4 ~~V~ivG~~nvGKStL~n~l~~~~~~~v~-~~~g~T~d~~~~~~~~~--~~~~~l~DT~G~~~~~~~~~~~~~~~~--~~ 78 (436)
T 2hjg_A 4 PVVAIVGRPNVGKSTIFNRIAGERISIVE-DTPGVTRDRIYSSAEWL--NYDFNLIDTGGIDIGDEPFLAQIRQQA--EI 78 (436)
T ss_dssp CEEEEECSTTSSHHHHHHHHEEEECC------------CEEEECTTC--SSCCEEEC---------CHHHHHHHHH--HH
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCceeec-CCCCCccceEEEEEEEC--CceEEEEECCCCCCcchhHHHHHHHHH--HH
Confidence 58999999999999999999998775433 344443 333333444 3467899999975 455444 57
Q ss_pred ccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 356 SLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 356 ~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+++.+|++++|+|+++..++.. .|+..+.... +.|+++|+||+|+...
T Consensus 79 ~~~~ad~il~vvD~~~~~~~~d--~~~~~~l~~~-----~~pvilv~NK~D~~~~ 126 (436)
T 2hjg_A 79 AMDEADVIIFMVNGREGVTAAD--EEVAKILYRT-----KKPVVLAVNKLDNTEM 126 (436)
T ss_dssp HHHHCSEEEEEEETTTCSCHHH--HHHHHHHTTC-----CSCEEEEEECCCC---
T ss_pred HHHhCCEEEEEEeCCCCCCHHH--HHHHHHHHHc-----CCCEEEEEECccCccc
Confidence 8899999999999998666543 3444444332 6899999999998763
No 228
>1xzp_A Probable tRNA modification GTPase TRME; GTP-binding, THF-binding, hydrolase; 2.30A {Thermotoga maritima} SCOP: a.24.25.1 c.37.1.8 d.250.1.2 PDB: 1xzq_A* 1xzp_B 1xzq_B*
Probab=99.48 E-value=2.7e-14 Score=145.46 Aligned_cols=127 Identities=18% Similarity=0.213 Sum_probs=90.9
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCC-CCcCCCccceEEEEEEEcCCCeEEEEEEeCCChh-HHHhhh------ccc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFS-DNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEE-AVAKLL------SNK 354 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~-~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e-~~~~~~------~~~ 354 (430)
+..++|+++|.+|||||||+|++++.++. ....|+++.+.....+.+++ ..+.+|||+|.. .+.... ...
T Consensus 241 r~~~kV~ivG~pnvGKSSLln~L~~~~~a~vs~~~gTT~d~~~~~i~~~g--~~~~l~DTaG~~~~~~~~ve~~gi~~~~ 318 (482)
T 1xzp_A 241 NRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG--ILFRIVDTAGVRSETNDLVERLGIERTL 318 (482)
T ss_dssp HHCEEEEEECCHHHHTCHHHHHHHHHTBCCCCCSSCCSSCSCCEEEEETT--EEEEEEESSCCCSSCCTTCCCCCHHHHH
T ss_pred cCCCEEEEECcCCCcHHHHHHHHHCCCCCccCCCCCeeeeeEEEEEecCC--eEEEEEECCCccccchhhHHHHHHHHHH
Confidence 45689999999999999999999988643 33345555666556677763 567899999986 433211 113
Q ss_pred cccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHH
Q 014101 355 DSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVF 421 (430)
Q Consensus 355 ~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~ 421 (430)
.+++.+|++++|+|++++.+++... ++..+ . +.|+++|+||+|+.+. +..+++.+++
T Consensus 319 ~~~~~aD~vl~VvD~s~~~s~~~~~-il~~l---~-----~~piivV~NK~DL~~~-~~~~~~~~~~ 375 (482)
T 1xzp_A 319 QEIEKADIVLFVLDASSPLDEEDRK-ILERI---K-----NKRYLVVINKVDVVEK-INEEEIKNKL 375 (482)
T ss_dssp HHHHHCSEEEEEEETTSCCCHHHHH-HHHHH---T-----TSSEEEEEEECSSCCC-CCHHHHHHHH
T ss_pred HHhhcccEEEEEecCCCCCCHHHHH-HHHHh---c-----CCCEEEEEECcccccc-cCHHHHHHHh
Confidence 6778999999999999988876543 33332 1 5799999999999763 4445555543
No 229
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=99.48 E-value=1.3e-13 Score=129.82 Aligned_cols=121 Identities=12% Similarity=0.121 Sum_probs=80.6
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCc-CCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhcccccc----
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNY-TPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSL---- 357 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~-~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~---- 357 (430)
...++|+++|.+|||||||++++++....... .++.+.......+..+ ...+.+|||+|.+.+.... ..++
T Consensus 34 ~~~~~I~lvG~~g~GKSSLin~l~~~~~~~~~~~~~~t~~~~~~~~~~~--~~~l~liDTpG~~~~~~~~--~~~~~~i~ 109 (262)
T 3def_A 34 MNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMG--GFTINIIDTPGLVEAGYVN--HQALELIK 109 (262)
T ss_dssp CCEEEEEEEECTTSSHHHHHHHHHTSCCSCCCSSCC-CCCCEEEEEEET--TEEEEEEECCCSEETTEEC--HHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhCCCCcccCCCCCcceeeEEEEEEEC--CeeEEEEECCCCCCcccch--HHHHHHHH
Confidence 45689999999999999999999998864332 2333333333445555 3578899999986554322 1111
Q ss_pred -----ccccEEEEEEECCChhhHHHH-HHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC
Q 014101 358 -----AACDIAVFVHDSSDESSWKRA-TELLVEVASYGEDTGFEVPCLIVAAKDDLDS 409 (430)
Q Consensus 358 -----~~ad~vilv~D~t~~~S~~~~-~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~ 409 (430)
..+|++++|++++... +... ..|+..+....... ...|+++|+||+|+.+
T Consensus 110 ~~l~~~~~~~il~V~~~d~~~-~~~~~~~~~~~l~~~~~~~-~~~~~ivv~nK~Dl~~ 165 (262)
T 3def_A 110 GFLVNRTIDVLLYVDRLDVYA-VDELDKQVVIAITQTFGKE-IWCKTLLVLTHAQFSP 165 (262)
T ss_dssp HHTTTCEECEEEEEEESSCSC-CCHHHHHHHHHHHHHHCGG-GGGGEEEEEECTTCCC
T ss_pred HHHhcCCCCEEEEEEcCCCCC-CCHHHHHHHHHHHHHhchh-hhcCEEEEEeCcccCC
Confidence 3789999999997654 4333 45666665543210 1249999999999964
No 230
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.46 E-value=6e-14 Score=154.14 Aligned_cols=171 Identities=12% Similarity=0.134 Sum_probs=118.6
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCc
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRL 134 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~ 134 (430)
+..++++|+.||+|+||.|+.+||..++.. .|..+++++++.++..+ | +++| |+|+||+.++...
T Consensus 606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~-~g~~l~~~~~~~l~~~~------d-d~dg~I~~~eF~~~~~~~------ 671 (900)
T 1qxp_A 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEA-AGFKLPCQLHQVIVARF------A-DDELIIDFDNFVRCLVRL------ 671 (900)
T ss_dssp HHHHHHHHGGGCTTCCSCCBHHHHHHHHHH-TTEECCHHHHHHHHHHT------S-CSSSBCCHHHHHHHHHHH------
T ss_pred HHHHHHHHHhhCCCCCCeECHHHHHHHHHH-hCCCCCHHHHHHHHHHh------C-CCCCeEcHHHHHHHHHHH------
Confidence 467899999999999999999999999776 58889999999999987 5 6778 9999999987642
Q ss_pred hhHHHHHHhhcCCCCccccc---ccC---CC-------Cc---ccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHH
Q 014101 135 ETTWTVLRKFGYNNDIKLAD---ELI---PY-------SA---FKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPI 198 (430)
Q Consensus 135 ~~~w~~l~~~~y~~~l~~~~---~~~---~~-------~~---~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~ 198 (430)
+.++.+|+.++.++++.|+. +.+ .. .. ................+.++++|+.||.+ +|.|+.+
T Consensus 672 ~~l~~~F~~~D~d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~ 750 (900)
T 1qxp_A 672 EILFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSAT 750 (900)
T ss_dssp HHHHHHHHHSCSSCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHH
T ss_pred HHHHHHHHhhCCCCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHH
Confidence 56788999999999887743 110 00 00 00000011112223345688999999998 9999999
Q ss_pred HHHHhhccCCCC-------C---CCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 199 EVEDLFSTAPEC-------P---WDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 199 el~~~~~~~~~~-------~---~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
||++++...+.. + .....+++.+|.|+||.|+|+||...|...
T Consensus 751 El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~~ 803 (900)
T 1qxp_A 751 ELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI 803 (900)
T ss_dssp HHTTTSCC----CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHHH
T ss_pred HHHHHHHHhcccccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHHH
Confidence 999998764311 1 112346678999999999999999987643
No 231
>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* 3kxi_A* 3kxl_A 3kxk_A
Probab=99.46 E-value=4.1e-13 Score=132.25 Aligned_cols=132 Identities=16% Similarity=0.085 Sum_probs=86.3
Q ss_pred eeE-EEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCCh---------hHHHhhhccc
Q 014101 285 VFQ-CFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPE---------EAVAKLLSNK 354 (430)
Q Consensus 285 ~~k-I~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~---------e~~~~~~~~~ 354 (430)
.++ |+++|++|||||||+|++++........+..+.+.....+.+++ ..+.+|||+|. +.+....
T Consensus 178 ~~~~V~lvG~~naGKSTLln~L~~~~~~~~~~~~~T~d~~~~~i~~~g--~~v~l~DT~G~i~~lp~~lve~f~~tl--- 252 (364)
T 2qtf_A 178 NIPSIGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINN--RKIMLVDTVGFIRGIPPQIVDAFFVTL--- 252 (364)
T ss_dssp -CCEEEEECBTTSSHHHHHHHHHCC-----------CCSCEEEEEETT--EEEEEEECCCBCSSCCGGGHHHHHHHH---
T ss_pred CCcEEEEECCCCCCHHHHHHHHHCCCccccCCcccccCCEEEEEEECC--EEEEEEeCCCchhcCCHHHHHHHHHHH---
Confidence 344 99999999999999999999876444444444455556777774 56789999995 3344433
Q ss_pred cccccccEEEEEEECCChh--hHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCc--HHHHHHHHHHh
Q 014101 355 DSLAACDIAVFVHDSSDES--SWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMA--IQDSTRVFTFL 424 (430)
Q Consensus 355 ~~~~~ad~vilv~D~t~~~--S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~--~~~~~~~~~~~ 424 (430)
..+..+|++++|+|++++. +...+..|...+..... .+.|+++|+||+|+.+.... ...+..+++.+
T Consensus 253 ~~~~~aD~il~VvD~s~~~~~~~~~~~~~~~~L~~l~~---~~~p~ilV~NK~Dl~~~~~~~~~~~~~~l~~~l 323 (364)
T 2qtf_A 253 SEAKYSDALILVIDSTFSENLLIETLQSSFEILREIGV---SGKPILVTLNKIDKINGDLYKKLDLVEKLSKEL 323 (364)
T ss_dssp HGGGGSSEEEEEEETTSCHHHHHHHHHHHHHHHHHHTC---CSCCEEEEEECGGGCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEEEEECCCCcchHHHHHHHHHHHHHHhCc---CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHh
Confidence 4678999999999999876 56666556555544322 26899999999999764311 23344455554
No 232
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=99.45 E-value=1.8e-13 Score=109.38 Aligned_cols=72 Identities=15% Similarity=0.251 Sum_probs=66.2
Q ss_pred ccCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 47 ESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 47 ~~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
....|+++++++|+++|+.||+|+||+|+.+||+.+++. +|..+++++++.+++.+ |.+++| |+|+||+.+|
T Consensus 26 ~~~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~-lg~~~~~~ei~~l~~~~------D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 26 RPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRS-LGYMPNEVELEVIIQRL------DMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp SCCCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHH-HTCCCCTTTHHHHHHHH------CSSCSSSBCHHHHHHHT
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHH------CCCCCCeEeHHHHHHHh
Confidence 356789999999999999999999999999999999876 58899999999999999 788999 9999999885
No 233
>3sjy_A Translation initiation factor 2 subunit gamma; zinc finger, initiate translation, tRNA binding, mRNA bindin binding; HET: GCP GDP; 2.00A {Sulfolobus solfataricus P2} PDB: 3pen_A* 3sjz_A* 2qn6_A* 2aho_A 2qmu_A* 2plf_A* 3v11_A* 3i1f_A* 3cw2_A 2pmd_A* 3p3m_A* 3qsy_A*
Probab=99.45 E-value=5e-13 Score=133.71 Aligned_cols=117 Identities=20% Similarity=0.182 Sum_probs=86.8
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEE---------------------Ec---CCCeEEEE
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVV---------------------DQ---PGGTKKTV 337 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v---------------------~~---~~~~~~~~ 337 (430)
..+.++|+++|.+|+|||||+++|++....... + +..... .. ......+.
T Consensus 5 ~~~~~~I~vvG~~~~GKSTLi~~L~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (403)
T 3sjy_A 5 VQPEVNIGVVGHVDHGKTTLVQAITGIWTSKKL----G--YAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPKFLRRIS 78 (403)
T ss_dssp CCCCCEEEEECSTTSSHHHHHHHHHSCCCCSSS----E--EEEEEEEECTTSCTTTTEESSSCCGGGTCCSCCEEEEEEE
T ss_pred cCCCcEEEEECCCCCCHHHHHHHHhCccccccc----C--ccccceeeccccccccceecccccccccccccccccceEE
Confidence 356689999999999999999999986443211 0 000000 00 00125778
Q ss_pred EEeCCChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc
Q 014101 338 VLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA 411 (430)
Q Consensus 338 i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~ 411 (430)
+||++|++.|.... ...+..+|++++|+|+++..++.+..+|+..+.... ..|+++|+||+|+.+..
T Consensus 79 iiDtPGh~~~~~~~--~~~~~~~D~~ilVvda~~~~~~~qt~~~~~~~~~~~-----~~~iivviNK~Dl~~~~ 145 (403)
T 3sjy_A 79 FIDAPGHEVLMATM--LSGAALMDGAILVVAANEPFPQPQTREHFVALGIIG-----VKNLIIVQNKVDVVSKE 145 (403)
T ss_dssp EEECCCCGGGHHHH--HHHHTTCSEEEEEEETTSCSSCHHHHHHHHHHHHHT-----CCCEEEEEECGGGSCHH
T ss_pred EEECCCcHHHHHHH--HHHHhhCCEEEEEEECCCCCCcHHHHHHHHHHHHcC-----CCCEEEEEECccccchH
Confidence 99999999988876 678899999999999998777888888887766553 35899999999998743
No 234
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=99.45 E-value=4.3e-14 Score=139.24 Aligned_cols=140 Identities=16% Similarity=0.116 Sum_probs=77.8
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCC-CCcC--------CCccceEEEEEEEcCCCeEEEEEEeCCCh-------hH
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFS-DNYT--------PTTDERYAVNVVDQPGGTKKTVVLREIPE-------EA 346 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~-~~~~--------~t~~~~~~~~~v~~~~~~~~~~i~d~~G~-------e~ 346 (430)
...++|+|+|++|||||||++++++.... ..+. +|++.......+...+....+.+|||+|. +.
T Consensus 35 ~~~~~I~vvG~~g~GKSTLln~L~~~~~~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~l~i~DTpG~gd~~~~~e~ 114 (361)
T 2qag_A 35 GFEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDC 114 (361)
T ss_dssp CCEECEEECCCTTSCHHHHHHHHTTCCC---------------CEEEEEEEEC----CEEEEEEEEC-------------
T ss_pred CCCEEEEEEcCCCCCHHHHHHHHhCCCCCCCCcccCCCcccCCceeEEEEEEEeecCCcccceEEEEeccccccCccHHH
Confidence 44589999999999999999998765432 2221 34443333333344434457889999998 54
Q ss_pred HHhhhc-----ccccccccc-----------EEEEEEECCC-hhhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCC
Q 014101 347 VAKLLS-----NKDSLAACD-----------IAVFVHDSSD-ESSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLD 408 (430)
Q Consensus 347 ~~~~~~-----~~~~~~~ad-----------~vilv~D~t~-~~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~ 408 (430)
+..+.. ...+++.++ +.+++|++++ ..++..+. .|+..+. .++|+|+|+||+|+.
T Consensus 115 ~~~i~~~i~~~~~~yl~~~~~~~r~~~~d~rv~~~vy~I~~~~~~l~~~d~~~~~~l~-------~~~piIlV~NK~Dl~ 187 (361)
T 2qag_A 115 FKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIH-------NKVNIVPVIAKADTL 187 (361)
T ss_dssp -CCTHHHHHHHHHHHHHHHTCSCCC-CCCCCCCEEEEEECSSSSSCCHHHHHHHHHTC-------S-SCEEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccccccCCceEEEEEEEecCCCCcchhHHHHHHHhc-------cCCCEEEEEECCCCC
Confidence 544431 003333333 2245666554 45666554 3444431 268999999999998
Q ss_pred Ccc-CcH--HHHHHHHHHhCCccc
Q 014101 409 SFA-MAI--QDSTRVFTFLVMVLY 429 (430)
Q Consensus 409 ~~~-v~~--~~~~~~~~~~g~~~f 429 (430)
..+ +.. +++.++++.+++++|
T Consensus 188 ~~~ev~~~k~~i~~~~~~~~i~~~ 211 (361)
T 2qag_A 188 TLKERERLKKRILDEIEEHNIKIY 211 (361)
T ss_dssp CHHHHHHHHHHHHHHTTCC-CCSC
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEE
Confidence 753 332 578888888888876
No 235
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.44 E-value=9.9e-15 Score=153.06 Aligned_cols=127 Identities=14% Similarity=0.124 Sum_probs=53.6
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
..|+++|+.||+|+||.|+.+||..+++. +|..++++++..+++.+ |.+++| |+|+||+.++....
T Consensus 11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~-lg~~~s~~el~~lf~~~------D~d~~G~I~f~EF~~~~~~l~------ 77 (624)
T 1djx_A 11 HWIHSCLRKADKNKDNKMNFKELKDFLKE-LNIQVDDGYARKIFREC------DHSQTDSLEDEEIETFYKMLT------ 77 (624)
T ss_dssp ----------------------------------------------------------------CTTHHHHHHT------
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHh------CCCCCCeEeHHHHHHHHHHhc------
Confidence 47899999999999999999999999775 58888999999999998 677888 99999999875311
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC-C--
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP-W-- 212 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~-~-- 212 (430)
. .+.++++|+.||++ +|+|+.+||++++....+.+ .
T Consensus 78 -------------------------------------~---~~el~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ 116 (624)
T 1djx_A 78 -------------------------------------Q---RAEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGP 116 (624)
T ss_dssp -------------------------------------C---CHHHHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSH
T ss_pred -------------------------------------c---HHHHHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCH
Confidence 0 13478999999985 99999999999998543222 2
Q ss_pred -CCCccccccccc----CCcccchhhHHhh
Q 014101 213 -DEAPYKDAAEKT----ALGGLSLDGFLSE 237 (430)
Q Consensus 213 -~~~~~~~~~d~~----~dg~i~~~ef~~~ 237 (430)
....+++++|.| ++|.|+|+||+..
T Consensus 117 ee~~~ii~~~d~d~~~~~dG~Is~deF~~~ 146 (624)
T 1djx_A 117 ALALSLIERYEPSETAKAQRQMTKDGFLMY 146 (624)
T ss_dssp HHHHHHHHHHCCCHHHHHTTEECHHHHHHH
T ss_pred HHHHHHHHHhCCChhhccCCCCCHHHHHHH
Confidence 234577888887 7999999999876
No 236
>3geh_A MNME, tRNA modification GTPase MNME; G protein, U34, GTP-binding, HYDR magnesium, metal-binding, nucleotide-binding, potassium, TR processing; HET: GDP FON; 3.20A {Nostoc SP}
Probab=99.43 E-value=9.2e-14 Score=140.89 Aligned_cols=118 Identities=19% Similarity=0.196 Sum_probs=78.2
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCC-CcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhh------ccc
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSD-NYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLL------SNK 354 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~-~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~------~~~ 354 (430)
.+..++|+++|.+|||||||+|+|++..+.. ...++++.++....+.+++ ..+.+|||+|...+.... ...
T Consensus 221 ~r~~~kV~ivG~~nvGKSSLln~L~~~~~a~v~~~~gtT~d~~~~~i~~~g--~~v~liDT~G~~~~~~~ve~~gi~~~~ 298 (462)
T 3geh_A 221 LRTGLKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGG--IPVQVLDTAGIRETSDQVEKIGVERSR 298 (462)
T ss_dssp HHHCEEEEEEECTTSSHHHHHHHHHHHHBSCCSCCTTCCHHHHHHEEEETT--EEEEECC--------------------
T ss_pred hcCCCEEEEEcCCCCCHHHHHHHHhCCCcccccCCCCeeEEEEEEEEEECC--EEEEEEECCccccchhHHHHHHHHHHh
Confidence 3456899999999999999999999876542 3335555555444556663 567899999975544322 124
Q ss_pred cccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 355 DSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 355 ~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
.+++.+|++++|+|++++.+... ..|+..+. ..|+++|+||+|+...
T Consensus 299 ~~~~~aD~vl~VvD~s~~~~~~~-~~i~~~l~--------~~piivV~NK~Dl~~~ 345 (462)
T 3geh_A 299 QAANTADLVLLTIDAATGWTTGD-QEIYEQVK--------HRPLILVMNKIDLVEK 345 (462)
T ss_dssp CCCCSCSEEEEEEETTTCSCHHH-HHHHHHHT--------TSCEEEEEECTTSSCG
T ss_pred hhhhcCCEEEEEeccCCCCCHHH-HHHHHhcc--------CCcEEEEEECCCCCcc
Confidence 57889999999999998766654 44555542 4699999999999764
No 237
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.43 E-value=1.5e-14 Score=158.91 Aligned_cols=132 Identities=17% Similarity=0.127 Sum_probs=91.0
Q ss_pred ccHHH-HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcC-------CCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhH
Q 014101 51 LKPRC-VRALKRIFILCDHDRDGALSDAELNDFQVKCFN-------SPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGF 121 (430)
Q Consensus 51 lt~~~-~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g-------~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eF 121 (430)
|++++ +++|+++|..+| |+||.|+.+||..++..++. ..++.+++..+++.+ |.+++| |+|+||
T Consensus 527 l~~~e~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~------D~d~~G~I~~~EF 599 (900)
T 1qxp_A 527 LSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLM------DRDGNGKLGLVEF 599 (900)
T ss_dssp --------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHH------CC--CCCCCSSSH
T ss_pred CCcchHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHh------CCCCCCcCCHHHH
Confidence 65555 889999999999 99999999999998776543 278999999999998 678888 999999
Q ss_pred HHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHH
Q 014101 122 LFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVE 201 (430)
Q Consensus 122 l~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~ 201 (430)
+.++.. .+.++.+|+.||+|+||.|+.+||+
T Consensus 600 ~~~~~~-------------------------------------------------~~~l~~~F~~~D~d~~G~Is~~El~ 630 (900)
T 1qxp_A 600 NILWNR-------------------------------------------------IRNYLTIFRKFDLDKSGSMSAYEMR 630 (900)
T ss_dssp HHHHHH-------------------------------------------------HHHHHHHHGGGCTTCCSCCBHHHHH
T ss_pred HHHHHH-------------------------------------------------HHHHHHHHHhhCCCCCCeECHHHHH
Confidence 998642 1347788888999999999999988
Q ss_pred HhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 202 DLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 202 ~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.++...+... .....++..+| |+||.|+|+||+..+.
T Consensus 631 ~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~ 669 (900)
T 1qxp_A 631 MAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLV 669 (900)
T ss_dssp HHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHH
T ss_pred HHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHH
Confidence 8887653211 12234556778 8888899998887755
No 238
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=99.43 E-value=9.8e-14 Score=141.09 Aligned_cols=115 Identities=13% Similarity=0.091 Sum_probs=77.0
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCC--------hhHHHhhhccccc
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIP--------EEAVAKLLSNKDS 356 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G--------~e~~~~~~~~~~~ 356 (430)
..+|+++|.+|||||||+|+|++..+.... ++.|.+..............+.+|||+| ++.+.... ..+
T Consensus 23 ~~~V~lvG~~nvGKSTL~n~l~~~~~~~v~-~~~g~t~~~~~~~~~~~~~~~~liDT~G~~~~~~~~~~~~~~~~--~~~ 99 (456)
T 4dcu_A 23 KPVVAIVGRPNVGKSTIFNRIAGERISIVE-DTPGVTRDRIYSSAEWLNYDFNLIDTGGIDIGDEPFLAQIRQQA--EIA 99 (456)
T ss_dssp CCEEEEECSSSSSHHHHHHHHEEEEEC------------CEEEECTTCSSCCEEECCCC------CCHHHHHHHH--HHH
T ss_pred CCEEEEECCCCCcHHHHHHHHhCCCCcccC-CCCCcceeEEEEEEEECCceEEEEECCCCCCcchHHHHHHHHHH--Hhh
Confidence 469999999999999999999998776433 3444444434444443445788999999 77777666 678
Q ss_pred cccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC
Q 014101 357 LAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDS 409 (430)
Q Consensus 357 ~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~ 409 (430)
++.+|++++|+|.++ ++.....|+..+.... +.|+++|+||+|+.+
T Consensus 100 ~~~ad~il~VvD~~~--~~~~~d~~l~~~l~~~-----~~pvilV~NK~D~~~ 145 (456)
T 4dcu_A 100 MDEADVIIFMVNGRE--GVTAADEEVAKILYRT-----KKPVVLAVNKLDNTE 145 (456)
T ss_dssp HHHCSEEEEEEESSS--CSCHHHHHHHHHHTTC-----CSCEEEEEECC----
T ss_pred HhhCCEEEEEEeCCC--CCChHHHHHHHHHHHc-----CCCEEEEEECccchh
Confidence 899999999999875 3333344555544432 689999999999875
No 239
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.42 E-value=1.4e-13 Score=111.12 Aligned_cols=100 Identities=14% Similarity=0.242 Sum_probs=78.0
Q ss_pred hcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccC
Q 014101 86 CFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKR 164 (430)
Q Consensus 86 ~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~ 164 (430)
.+|. ++++++..+++.+ | ++| |+|+||+.++..
T Consensus 2 slG~-~~~~e~~~l~~~~------d--~~g~i~~~eF~~~~~~------------------------------------- 35 (108)
T 2pvb_A 2 SFAG-LKDADVAAALAAC------S--AADSFKHKEFFAKVGL------------------------------------- 35 (108)
T ss_dssp CCTT-SCHHHHHHHHHHT------C--STTCCCHHHHHHHHTG-------------------------------------
T ss_pred CcCC-CCHHHHHHHHHHh------C--CCCcCcHHHHHHHHhC-------------------------------------
Confidence 3577 8999999999987 3 567 999999987531
Q ss_pred CCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC--CCCC---CCCcccccccccCCcccchhhHHhhhh
Q 014101 165 APDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP--ECPW---DEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 165 ~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~--~~~~---~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+....+.++.+|+.||+|++|+|+.+||+.++.... +.+. ....+++.+|.|+||.|+|+||+..+.
T Consensus 36 --------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 36 --------ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp --------GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred --------ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 011234588999999999999999999999998762 2222 223567889999999999999998753
No 240
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=99.42 E-value=1e-12 Score=124.52 Aligned_cols=139 Identities=14% Similarity=0.088 Sum_probs=84.7
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCc--------CCCccceEEEEEEEcCCCeEEEEEEeCCChh-------HHH
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNY--------TPTTDERYAVNVVDQPGGTKKTVVLREIPEE-------AVA 348 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~--------~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e-------~~~ 348 (430)
..++|+|+|.+|||||||+|++++....... .+|++.+.....+..++....+.+|||+|.. .+.
T Consensus 7 ~~~~I~vvG~~g~GKSTLin~L~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~liDTpG~~d~~~~~~~~~ 86 (274)
T 3t5d_A 7 FEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQ 86 (274)
T ss_dssp CEEEEEEEECTTSSHHHHHHHHSSSCC---------------CCCEEEEEEECC--CCEEEEEEECCCCSCCSCCTTTTH
T ss_pred cEEEEEEECCCCCCHHHHHHHHhCCCccccCCCCcccccCCceEEEEEEEEEecCCeEEEEEEEECCCccccccchhhHH
Confidence 4589999999999999999998776654332 4566666665556556555688999999962 111
Q ss_pred hh-----------h-------ccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 349 KL-----------L-------SNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 349 ~~-----------~-------~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
.+ . .....-..+|+++++++.+.......-..++..+.. ++|+|+|+||+|+...
T Consensus 87 ~i~~~i~~~~~~~l~~~~~~~r~~~~d~r~~~~l~~i~~~~~~~~~~d~~~l~~l~~-------~~pvi~V~nK~D~~~~ 159 (274)
T 3t5d_A 87 PVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHE-------KVNIIPLIAKADTLTP 159 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCSCCCCCCCEEEEEECSCCSSCCHHHHHHHHHHTT-------TSCEEEEESSGGGSCH
T ss_pred HHHHHHHHHHHHHHHhhcccccccccCCceeEEEEEecCCCCCCCHHHHHHHHHHhc-------cCCEEEEEeccCCCCH
Confidence 11 1 001111347899999987753222222334555432 4899999999998763
Q ss_pred cC---cHHHHHHHHHHhCCccc
Q 014101 411 AM---AIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 411 ~v---~~~~~~~~~~~~g~~~f 429 (430)
.. ..+.+.+.....++++|
T Consensus 160 ~e~~~~~~~i~~~l~~~~i~v~ 181 (274)
T 3t5d_A 160 EECQQFKKQIMKEIQEHKIKIY 181 (274)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHcCCeEE
Confidence 21 12345556666777765
No 241
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.42 E-value=1.4e-13 Score=111.28 Aligned_cols=100 Identities=14% Similarity=0.218 Sum_probs=78.7
Q ss_pred cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCC
Q 014101 87 FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRA 165 (430)
Q Consensus 87 ~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~ 165 (430)
+|..++++++..+++.+ | ++| |+|+||+.++..
T Consensus 3 l~~~~~~~ei~~~~~~~------D--~~g~i~~~eF~~~~~~-------------------------------------- 36 (109)
T 3fs7_A 3 ITDILSAKDIESALSSC------Q--AADSFNYKSFFSTVGL-------------------------------------- 36 (109)
T ss_dssp GGGTSCHHHHHHHHHHT------C--STTCCCHHHHHHHHTC--------------------------------------
T ss_pred ccCcCCHHHHHHHHHhc------C--CCCcCcHHHHHHHHhc--------------------------------------
Confidence 56778999999999987 4 567 999999988530
Q ss_pred CCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC--CCCCC---CCcccccccccCCcccchhhHHhhhh
Q 014101 166 PDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP--ECPWD---EAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 166 ~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~--~~~~~---~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+....+.++.+|+.||+|++|+|+.+||+.++...+ +.+.. ...+++.+|.|+||.|+|+||+..+.
T Consensus 37 -------~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 37 -------SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp -------TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred -------CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 011234588999999999999999999999998762 22222 24567889999999999999998764
No 242
>3p26_A Elongation factor 1 alpha-like protein; GTP/GDP binding domain, beta-barrel, translational GTPase, D structural genomics; 2.50A {Saccharomyces cerevisiae} PDB: 3p27_A*
Probab=99.41 E-value=3e-13 Score=138.50 Aligned_cols=136 Identities=13% Similarity=0.074 Sum_probs=85.3
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCC-------------------------------CcCCCccceEEEEEEEcC
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSD-------------------------------NYTPTTDERYAVNVVDQP 330 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~-------------------------------~~~~t~~~~~~~~~v~~~ 330 (430)
.++.+||+++|.+|+|||||+++|++..... ...+.++.+.....+..
T Consensus 30 ~k~~~ki~iiG~~~~GKSTLi~~Ll~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~e~~~GiTi~~~~~~~~~- 108 (483)
T 3p26_A 30 ALPHLSFVVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERGVTVSICTSHFST- 108 (483)
T ss_dssp SCCEEEEEEESCGGGTHHHHHHHHHHHTTSSCHHHHHHHCC------------------------CCSSCCCCEEEEEC-
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHhcCCccHHHHHHHHHHHHhcCCCcchhhhhhccchhHhhcCcceEeeeEEEec-
Confidence 3567999999999999999999997551110 00112222222233333
Q ss_pred CCeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChhhHH------HHHHHHHHHHhcCCCCCCCCcEEEEEeC
Q 014101 331 GGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWK------RATELLVEVASYGEDTGFEVPCLIVAAK 404 (430)
Q Consensus 331 ~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~------~~~~~l~~l~~~~~~~~~~~PiilVgnK 404 (430)
....+.+|||+|++.|.... ..+++.+|++++|+|+++..++. ...+.+..+.... ..|+|+|+||
T Consensus 109 -~~~~~~iiDTPG~~~f~~~~--~~~~~~aD~~llVvDa~~g~~~~~~~~~~qt~e~~~~~~~~~-----~~~iIvviNK 180 (483)
T 3p26_A 109 -HRANFTIVDAPGHRDFVPNA--IMGISQADMAILCVDCSTNAFESGFDLDGQTKEHMLLASSLG-----IHNLIIAMNK 180 (483)
T ss_dssp -SSCEEEEECCCCCGGGHHHH--HHHHTTCSEEEEEEECCC------CCCCHHHHHHHHHHHHTT-----CCCEEEEEEC
T ss_pred -CCceEEEEECCCcHHHHHHH--HHhhhhCCEEEEEEECCCCccccccchhhhHHHHHHHHHHcC-----CCcEEEEEEC
Confidence 34678899999999988877 67889999999999999865432 2222222232221 3569999999
Q ss_pred CCCCCcc-Cc----HHHHHHHHHHhCC
Q 014101 405 DDLDSFA-MA----IQDSTRVFTFLVM 426 (430)
Q Consensus 405 ~Dl~~~~-v~----~~~~~~~~~~~g~ 426 (430)
+|+.+.. .. .+++.++.+.+|+
T Consensus 181 ~Dl~~~~~~~~~~i~~~~~~~l~~~g~ 207 (483)
T 3p26_A 181 MDNVDWSQQRFEEIKSKLLPYLVDIGF 207 (483)
T ss_dssp GGGGTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred cCcccchHHHHHHHHHHHHHHHHHcCC
Confidence 9998632 22 3344455555443
No 243
>3j2k_7 ERF3, eukaryotic polypeptide chain release factor 3; rabbit 80S ribosome, ribosome-translation complex; 17.00A {Oryctolagus cuniculus}
Probab=99.40 E-value=1.5e-12 Score=131.58 Aligned_cols=135 Identities=11% Similarity=0.084 Sum_probs=90.2
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCC-------------------------------CcCCCccceEEEEEEEcC
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSD-------------------------------NYTPTTDERYAVNVVDQP 330 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~-------------------------------~~~~t~~~~~~~~~v~~~ 330 (430)
.+..++|+++|.+|+|||||+++|+...-.. ...+.++.+.....+..+
T Consensus 14 ~k~~~~i~iiG~~d~GKSTL~~~Ll~~~~~i~~~~~~~~~~~~~~~g~~~~~~a~~~d~~~~er~~GiTid~~~~~~~~~ 93 (439)
T 3j2k_7 14 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE 93 (439)
T ss_pred CCceeEEEEEeCCCCCHHHHHHHHHHHcCCCchHHHHHHHHHHHhccccchhhhhhhccchhHhhcCceEEEeEEEEecC
Confidence 3566899999999999999999995442111 111233444444445544
Q ss_pred CCeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChhh---HH---HHHHHHHHHHhcCCCCCCCCc-EEEEEe
Q 014101 331 GGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESS---WK---RATELLVEVASYGEDTGFEVP-CLIVAA 403 (430)
Q Consensus 331 ~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S---~~---~~~~~l~~l~~~~~~~~~~~P-iilVgn 403 (430)
...+.+|||+|++.|.... ...++.+|++++|+|+++... |. +..+.+..+... ++| +|+|+|
T Consensus 94 --~~~~~iiDTPGh~~f~~~~--~~~~~~aD~~ilVVDa~~g~~e~~~~~~~qt~e~l~~~~~~------~v~~iIvviN 163 (439)
T 3j2k_7 94 --KKHFTILDAPGHKSFVPNM--IGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTA------GVKHLIVLIN 163 (439)
T ss_pred --CeEEEEEECCChHHHHHHH--HhhHhhCCEEEEEEECCCCccccccCCCchHHHHHHHHHHc------CCCeEEEEee
Confidence 3578899999999998876 677899999999999987432 22 233333333322 466 999999
Q ss_pred CCCCCCcc-------CcHHHHHHHHHHhCC
Q 014101 404 KDDLDSFA-------MAIQDSTRVFTFLVM 426 (430)
Q Consensus 404 K~Dl~~~~-------v~~~~~~~~~~~~g~ 426 (430)
|+|+.... ...++..++++++|+
T Consensus 164 K~Dl~~~~~~~~~~~~i~~~~~~~l~~~g~ 193 (439)
T 3j2k_7 164 KMDDPTVNWSNERYEECKEKLVPFLKKVGF 193 (439)
T ss_pred cCCCcccchHHHHHHHHHHHHHHHHHHhcc
Confidence 99996421 224556666666664
No 244
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.40 E-value=1.2e-13 Score=111.69 Aligned_cols=101 Identities=19% Similarity=0.254 Sum_probs=78.4
Q ss_pred hcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccC
Q 014101 86 CFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKR 164 (430)
Q Consensus 86 ~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~ 164 (430)
++|..++++++..+++.+ | ++| |+|+||+.++..
T Consensus 2 alG~~~t~~e~~~~~~~~------d--~~g~i~~~ef~~~~~~------------------------------------- 36 (110)
T 1pva_A 2 AAKDLLKADDIKKALDAV------K--AEGSFNHKKFFALVGL------------------------------------- 36 (110)
T ss_dssp CHHHHSCHHHHHHHHHHT------C--STTCCCHHHHHHHHTC-------------------------------------
T ss_pred cccccCCHHHHHHHHHhc------C--CCCcCcHHHHHHHHcc-------------------------------------
Confidence 356778999999999987 3 566 999999987420
Q ss_pred CCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC--CCCC---CCCcccccccccCCcccchhhHHhhhh
Q 014101 165 APDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP--ECPW---DEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 165 ~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~--~~~~---~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+....+.++.+|+.||+|++|+|+.+||+.++...+ +.+. ....+++.+|.|+||.|+|+||+..+.
T Consensus 37 --------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 37 --------KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH 108 (110)
T ss_dssp --------TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred --------CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 011234588999999999999999999999998762 2221 223577889999999999999998754
No 245
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.39 E-value=1.2e-12 Score=115.46 Aligned_cols=62 Identities=10% Similarity=0.075 Sum_probs=44.7
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhc---CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCF---NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~---g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
+.++++|+.|| |+||+|+.+||..++..+. |.++++++++.+++.+ | +++| |+|+||+.++.
T Consensus 76 ~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~------d-d~dG~I~~~EF~~~~~ 141 (174)
T 2i7a_A 76 VHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRY------S-DSVGRVSFPSLVCFLM 141 (174)
T ss_dssp HHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHH------S-CTTSEECHHHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHH------c-CCCCeEcHHHHHHHHH
Confidence 46677888888 8888888888877765431 6777777777777776 4 5667 88888877653
No 246
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.39 E-value=1.2e-13 Score=111.62 Aligned_cols=101 Identities=14% Similarity=0.226 Sum_probs=79.2
Q ss_pred hcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccC
Q 014101 86 CFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKR 164 (430)
Q Consensus 86 ~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~ 164 (430)
.+|..++++++..+++.+ | ++| |+|+||+.++..
T Consensus 2 slg~~~~~~e~~~~~~~~------d--~~g~i~~~eF~~~~~~------------------------------------- 36 (109)
T 1bu3_A 2 AFSGILADADVAAALKAC------E--AADSFNYKAFFAKVGL------------------------------------- 36 (109)
T ss_dssp CCSCSSCHHHHHHHHHHT------C--STTCCCHHHHHHHHTG-------------------------------------
T ss_pred cccccCCHHHHHHHHHHh------C--CCCcCcHHHHHHHHHc-------------------------------------
Confidence 368889999999999987 4 567 999999987520
Q ss_pred CCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC--CCC---CCCCcccccccccCCcccchhhHHhhhh
Q 014101 165 APDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP--ECP---WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 165 ~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~--~~~---~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.....+.++.+|+.||+|++|+|+.+||+.++...+ +.+ .....+++.+|.|+||.|+|+||+..+.
T Consensus 37 --------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 37 --------TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp --------GGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred --------ChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 011234588999999999999999999999998652 222 1224567889999999999999998753
No 247
>1s0u_A EIF-2-gamma, translation initiation factor 2 gamma subunit; GTPase, EF-1A, tRNA; 2.40A {Methanocaldococcus jannaschii} SCOP: b.43.3.1 b.44.1.1 c.37.1.8
Probab=99.39 E-value=6.4e-12 Score=125.88 Aligned_cols=130 Identities=15% Similarity=0.120 Sum_probs=86.4
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCC---CCCCcCC--CccceEEEEEEEc-------------C--CC----eEEEEE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRP---FSDNYTP--TTDERYAVNVVDQ-------------P--GG----TKKTVV 338 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~---~~~~~~~--t~~~~~~~~~v~~-------------~--~~----~~~~~i 338 (430)
++.++|+++|..++|||||+++|++.. +.....+ |+...+....+.. + +. ...+.+
T Consensus 6 ~~~~~I~iiG~~d~GKSTLi~~L~g~~~~~~~~e~~~giTi~~~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~~~i~i 85 (408)
T 1s0u_A 6 QAEVNIGMVGHVDHGKTSLTKALTGVWTDRHSEELRRGISIRLGYADCEIRKCPQCGTYTTKPRCPNCLAETEFLRRVSF 85 (408)
T ss_dssp CCCEEEEEESCTTSSHHHHHHHHHSCCCCC-------CCCCCCEEEEEEEEECTTTCCEESSSBCTTSCCBCEEEEEEEE
T ss_pred CCceEEEEEcCCCCCHHHHHHHHhCCccccCcccccCCcEEEecccccccccccccccccccccccccCcccccccEEEE
Confidence 356899999999999999999998553 2222223 4444444333321 1 11 267889
Q ss_pred EeCCChhHHHhhhccccccccccEEEEEEECCC----hhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc---
Q 014101 339 LREIPEEAVAKLLSNKDSLAACDIAVFVHDSSD----ESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA--- 411 (430)
Q Consensus 339 ~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~----~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~--- 411 (430)
||++|++.|.... ...+..+|++++|+|+++ +++++.+.. +.... ..|+++|+||+|+.+..
T Consensus 86 iDtPGh~~f~~~~--~~~~~~~D~~ilVvda~~g~~~~qt~e~l~~----~~~l~-----~~~iivv~NK~Dl~~~~~~~ 154 (408)
T 1s0u_A 86 VDSPGHETLMATM--LSGASLMDGAILVIAANEPCPQPQTKEHLMA----LEILG-----IDKIIIVQNKIDLVDEKQAE 154 (408)
T ss_dssp EECSSHHHHHHHH--HTTCSCCSEEEEEEETTSCSSCHHHHHHHHH----HHHTT-----CCCEEEEEECTTSSCTTTTT
T ss_pred EECCCHHHHHHHH--HHhHhhCCEEEEEEECCCCCCCchhHHHHHH----HHHcC-----CCeEEEEEEccCCCCHHHHH
Confidence 9999999988765 566788999999999985 344444432 22221 35899999999997743
Q ss_pred CcHHHHHHHHHH
Q 014101 412 MAIQDSTRVFTF 423 (430)
Q Consensus 412 v~~~~~~~~~~~ 423 (430)
...+++.++++.
T Consensus 155 ~~~~~i~~~l~~ 166 (408)
T 1s0u_A 155 ENYEQIKEFVKG 166 (408)
T ss_dssp THHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 235667777665
No 248
>1jny_A EF-1-alpha, elongation factor 1-alpha, EF-TU, TUF-1; GTPase, alpha/beta structure, protein biosynthesis, translation; HET: GDP; 1.80A {Sulfolobus solfataricus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1skq_A* 3agj_A*
Probab=99.39 E-value=7.9e-13 Score=133.55 Aligned_cols=133 Identities=11% Similarity=0.144 Sum_probs=89.1
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCC--CCCCCc-----------------------------CCCccceEEEEEEEcCC
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGR--PFSDNY-----------------------------TPTTDERYAVNVVDQPG 331 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~--~~~~~~-----------------------------~~t~~~~~~~~~v~~~~ 331 (430)
++.++|+++|.+++|||||+++|+.. .+.... .+.++.+.....+...
T Consensus 4 k~~~~I~iiG~~~~GKSTLi~~Ll~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~D~~~~E~~~giTi~~~~~~~~~~- 82 (435)
T 1jny_A 4 KPHLNLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERERGVTINLTFMRFETK- 82 (435)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHC-----------CEEECS-
T ss_pred CCEEEEEEEeCCCCCHHHHHHHHHHHcCCcCHHHHhhhhhhhhhcCCcchhhhhhhccChHHHhcCceeEeeEEEEecC-
Confidence 45689999999999999999999864 222110 1122222222234433
Q ss_pred CeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHH-------HHHHHhcCCCCCCCCcEEEEEeC
Q 014101 332 GTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATEL-------LVEVASYGEDTGFEVPCLIVAAK 404 (430)
Q Consensus 332 ~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~-------l~~l~~~~~~~~~~~PiilVgnK 404 (430)
...+.+|||+|++.|.... ..+++.+|++|+|+|+++ .+|+.+..| +..+.... ..|+++|+||
T Consensus 83 -~~~~~iiDtpG~~~f~~~~--~~~~~~aD~~ilVvDa~~-gsfe~~~~~~~qt~~~~~~~~~~~-----~~~iivviNK 153 (435)
T 1jny_A 83 -KYFFTIIDAPGHRDFVKNM--ITGASQADAAILVVSAKK-GEYEAGMSVEGQTREHIILAKTMG-----LDQLIVAVNK 153 (435)
T ss_dssp -SCEEEECCCSSSTTHHHHH--HHTSSCCSEEEEEEECST-THHHHHHSTTCHHHHHHHHHHHTT-----CTTCEEEEEC
T ss_pred -CeEEEEEECCCcHHHHHHH--HhhhhhcCEEEEEEECCC-CccccccccchHHHHHHHHHHHcC-----CCeEEEEEEc
Confidence 4568899999999998776 678899999999999998 778754433 22222221 2469999999
Q ss_pred CCCCCc-------cCcHHHHHHHHHHhC
Q 014101 405 DDLDSF-------AMAIQDSTRVFTFLV 425 (430)
Q Consensus 405 ~Dl~~~-------~v~~~~~~~~~~~~g 425 (430)
+|+.+. ....+++.++++.++
T Consensus 154 ~Dl~~~~~~~~~~~~~~~~i~~~~~~~~ 181 (435)
T 1jny_A 154 MDLTEPPYDEKRYKEIVDQVSKFMRSYG 181 (435)
T ss_dssp GGGSSSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCccccHHHHHHHHHHHHHHHHHcC
Confidence 999872 122567788888776
No 249
>4fid_A G protein alpha subunit; RAS-like domain, all-helical domain, GTP binding, nucleotide signaling protein, transducer, lipoprotein; HET: MLY MSE GDP; 2.62A {Entamoeba histolytica}
Probab=99.39 E-value=1.7e-12 Score=125.88 Aligned_cols=79 Identities=14% Similarity=0.028 Sum_probs=66.9
Q ss_pred EEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECC----------ChhhHHHHHHHHHHHHhcCCCCCC
Q 014101 325 NVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSS----------DESSWKRATELLVEVASYGEDTGF 394 (430)
Q Consensus 325 ~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t----------~~~S~~~~~~~l~~l~~~~~~~~~ 394 (430)
..+.+. ...+.+||++|++.++.++ ..++++++++|+|||++ +.+++.+...|+..+...... .
T Consensus 154 ~~~~~~--~v~l~iwDtaGQe~~R~~w--~~yy~~a~~iIfV~diS~ydq~l~e~~~~nr~~es~~~~~~i~~~~~~--~ 227 (340)
T 4fid_A 154 YDFVVK--DIPFHLIDVGGQRSERKXW--VSFFSDVDCAIFVTSLAEYDMKLYEDGNTSRLTESIAVFKDIMTNEFL--K 227 (340)
T ss_dssp EEEESS--SCEEEEEECCSCHHHHHHH--HTTSCSCSEEEEEEEGGGTTCBCC--CCSBHHHHHHHHHHHHHHCGGG--T
T ss_pred EEEEee--eeeeccccCCCcccccccH--HHHhccCCEEEEEEECCccccccccccccchHHHHHHHHHHHhhhhcc--C
Confidence 344444 4678999999999999999 88999999999999998 788999999999998875432 2
Q ss_pred CCcEEEEEeCCCCCC
Q 014101 395 EVPCLIVAAKDDLDS 409 (430)
Q Consensus 395 ~~PiilVgnK~Dl~~ 409 (430)
++|++|++||+|+..
T Consensus 228 ~~piiLv~NK~DL~~ 242 (340)
T 4fid_A 228 GAVKLIFLNKMDLFE 242 (340)
T ss_dssp TSEEEEEEECHHHHH
T ss_pred CCeEEEEEECchhhh
Confidence 799999999999865
No 250
>3ohm_A Guanine nucleotide-binding protein G(Q) subunit A; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Mus musculus} PDB: 2bcj_Q* 2rgn_A* 3ah8_A*
Probab=99.39 E-value=1.2e-12 Score=126.45 Aligned_cols=91 Identities=11% Similarity=0.062 Sum_probs=73.5
Q ss_pred EEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECC----------ChhhHHHHHHHHHHHHhcCCCCCCC
Q 014101 326 VVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSS----------DESSWKRATELLVEVASYGEDTGFE 395 (430)
Q Consensus 326 ~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t----------~~~S~~~~~~~l~~l~~~~~~~~~~ 395 (430)
.+.+. ...+.+||++|++.++.++ ..++++++++|+|||++ +.+++.+...|+..+...... .+
T Consensus 161 ~~~~~--~v~l~iwDtgGQe~~R~~w--~~yf~~~~~iIfV~dls~ydq~l~d~~~~nr~~es~~~~~~i~~~~~~--~~ 234 (327)
T 3ohm_A 161 PFDLQ--SVIFRMVDVGGQRSERRKW--IHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWF--QN 234 (327)
T ss_dssp EEEET--TEEEEEEEECCSHHHHTTG--GGGCSSCSEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTSGGG--TT
T ss_pred EEEee--ceeeEEEEcCCchhHHHHH--HHHhCCCCEEEEEEECccccccccccccHhHHHHHHHHHHHHhhhhcc--CC
Confidence 34444 4778899999999999999 89999999999999654 678899988999988765332 27
Q ss_pred CcEEEEEeCCCCCCcc-----------------CcHHHHHHHHH
Q 014101 396 VPCLIVAAKDDLDSFA-----------------MAIQDSTRVFT 422 (430)
Q Consensus 396 ~PiilVgnK~Dl~~~~-----------------v~~~~~~~~~~ 422 (430)
+|++|++||+|+..++ +..+++.+|..
T Consensus 235 ~~iiL~~NK~DL~~~ki~~~~l~~~fp~y~g~~~~~e~a~~fi~ 278 (327)
T 3ohm_A 235 SSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFIL 278 (327)
T ss_dssp CEEEEEEECHHHHHHHTTTSCGGGTCTTCCSCSSCHHHHHHHHH
T ss_pred ceEEEEEECchhhhhhhccchHhhhchhccCCCCCHHHHHHHHH
Confidence 9999999999996543 56788888853
No 251
>2c78_A Elongation factor TU-A; hydrolase, GTPase, translation elongation factor, protein synthesis, antibiotic, GTP-binding, nucleotide-binding; HET: GNP PUL; 1.4A {Thermus thermophilus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 2y0u_Z* 2y0w_Z* 2y0y_Z* 2y10_Z* 2y12_Z* 2y14_Z* 2y16_Z* 2y18_Z* 2wrn_Z* 2wrq_Z* 2c77_A* 1aip_A 1exm_A* 1ha3_A* 2xqd_Z* 3fic_Z* 4abr_Z* 1b23_P* 1ob5_A* 1ttt_A* ...
Probab=99.38 E-value=5.8e-13 Score=133.33 Aligned_cols=135 Identities=13% Similarity=0.089 Sum_probs=92.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCC--------CCCCC--cC-----CCccceEEEEEEEcCCCeEEEEEEeCCChhHH
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGR--------PFSDN--YT-----PTTDERYAVNVVDQPGGTKKTVVLREIPEEAV 347 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~--------~~~~~--~~-----~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~ 347 (430)
+..++|+++|.+|+|||||+++|++. .+... .. .+.+.++....+.+......+.+|||+|++.|
T Consensus 9 ~~~~~I~iiG~~~~GKSTLi~~L~~~~~~~g~~~~~~~~~~~d~~~~e~~~GiTi~~~~~~~~~~~~~~~iiDtpG~~~f 88 (405)
T 2c78_A 9 KPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADY 88 (405)
T ss_dssp CCEEEEEEECSTTSSHHHHHHHHHHHHHHSCTTSCCCCHHHHSCSHHHHHHTCCCSCEEEEEECSSCEEEEEECCCSGGG
T ss_pred CCeEEEEEEcCCCCCHHHHHHHHHhhhhhcCccccccchhhccCCHHHHHcCCCEEeeeeEeccCCeEEEEEECCChHHH
Confidence 45689999999999999999999873 22111 00 01222222233333333467789999999998
Q ss_pred HhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCc-EEEEEeCCCCCCcc----CcHHHHHHHHH
Q 014101 348 AKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVP-CLIVAAKDDLDSFA----MAIQDSTRVFT 422 (430)
Q Consensus 348 ~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~P-iilVgnK~Dl~~~~----v~~~~~~~~~~ 422 (430)
.... ...++.+|++++|+|+++... .+..+|+..+... ++| +++|+||+|+.+.+ ...+++.++++
T Consensus 89 ~~~~--~~~~~~aD~~ilVvda~~g~~-~qt~~~l~~~~~~------~ip~iivviNK~Dl~~~~~~~~~~~~~~~~~l~ 159 (405)
T 2c78_A 89 IKNM--ITGAAQMDGAILVVSAADGPM-PQTREHILLARQV------GVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLN 159 (405)
T ss_dssp HHHH--HHHHTTCSSEEEEEETTTCCC-HHHHHHHHHHHHT------TCCCEEEEEECGGGCCCHHHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHCCEEEEEEECCCCCc-HHHHHHHHHHHHc------CCCEEEEEEECccccCcHHHHHHHHHHHHHHHH
Confidence 7766 577899999999999988543 3445666655543 578 89999999998522 12346777777
Q ss_pred HhCC
Q 014101 423 FLVM 426 (430)
Q Consensus 423 ~~g~ 426 (430)
.+++
T Consensus 160 ~~~~ 163 (405)
T 2c78_A 160 QYEF 163 (405)
T ss_dssp HTTS
T ss_pred Hhcc
Confidence 7763
No 252
>1d2e_A Elongation factor TU (EF-TU); G-protein, beta-barrel, RNA binding protein; HET: GDP; 1.94A {Bos taurus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1xb2_A* 2hcj_A* 2hdn_A*
Probab=99.38 E-value=1.4e-12 Score=130.12 Aligned_cols=134 Identities=13% Similarity=0.053 Sum_probs=89.6
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCC-------CCCCC--c-----CCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHh
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGR-------PFSDN--Y-----TPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAK 349 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~-------~~~~~--~-----~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~ 349 (430)
+.++|+++|.+++|||||+++|++. .+... . ....+.+.....+.+......+.+||++|++.|..
T Consensus 2 ~~~~I~iiG~~~~GKSTLi~~L~~~~~~~g~~~~~~~~~~d~~~~e~~~giTi~~~~~~~~~~~~~~~iiDtpG~~~f~~ 81 (397)
T 1d2e_A 2 PHVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVK 81 (397)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTSBCCCCHHHHHSCCEEEETTEEEECEEEEEECSSCEEEEEECSSHHHHHH
T ss_pred CeEEEEEEeCCCCCHHHHHHHHhChhhhcCccccchhhhhhcCHHHHhcCcEEEeeeEEeccCCeEEEEEECCChHHHHH
Confidence 4589999999999999999999863 11110 0 00122222223333433446788999999999877
Q ss_pred hhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCc-EEEEEeCCCCCCcc----CcHHHHHHHHHHh
Q 014101 350 LLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVP-CLIVAAKDDLDSFA----MAIQDSTRVFTFL 424 (430)
Q Consensus 350 ~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~P-iilVgnK~Dl~~~~----v~~~~~~~~~~~~ 424 (430)
.. ...++.+|++++|+|+++....+. .+++..+... ++| +++|+||+|+.+.+ ...+++.++++.+
T Consensus 82 ~~--~~~~~~aD~~ilVvda~~g~~~qt-~e~l~~~~~~------~vp~iivviNK~Dl~~~~~~~~~~~~~~~~~l~~~ 152 (397)
T 1d2e_A 82 NM--ITGTAPLDGCILVVAANDGPMPQT-REHLLLARQI------GVEHVVVYVNKADAVQDSEMVELVELEIRELLTEF 152 (397)
T ss_dssp HH--HHTSSCCSEEEEEEETTTCSCHHH-HHHHHHHHHT------TCCCEEEEEECGGGCSCHHHHHHHHHHHHHHHHHT
T ss_pred HH--HhhHhhCCEEEEEEECCCCCCHHH-HHHHHHHHHc------CCCeEEEEEECcccCCCHHHHHHHHHHHHHHHHHc
Confidence 66 577899999999999998543332 3333334332 578 78999999998522 1235677888887
Q ss_pred CC
Q 014101 425 VM 426 (430)
Q Consensus 425 g~ 426 (430)
++
T Consensus 153 ~~ 154 (397)
T 1d2e_A 153 GY 154 (397)
T ss_dssp TS
T ss_pred CC
Confidence 74
No 253
>1cip_A Protein (guanine nucleotide-binding protein alpha-1 subunit); GTPase, hydrolase; HET: GNP; 1.50A {Rattus norvegicus} SCOP: a.66.1.1 c.37.1.8 PDB: 1agr_A* 1bof_A* 1gdd_A* 1gfi_A* 1gia_A* 1gp2_A* 3ffa_A* 3ffb_A* 1gg2_A* 1git_A* 1svs_A* 1svk_A* 2zjz_A* 2zjy_A* 3ums_A* 2pz2_A* 2pz3_A* 1as0_A* 1as2_A* 1as3_A* ...
Probab=99.37 E-value=1.3e-12 Score=127.89 Aligned_cols=87 Identities=9% Similarity=0.046 Sum_probs=73.5
Q ss_pred eEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCC----------hhhHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Q 014101 333 TKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSD----------ESSWKRATELLVEVASYGEDTGFEVPCLIVA 402 (430)
Q Consensus 333 ~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~----------~~S~~~~~~~l~~l~~~~~~~~~~~PiilVg 402 (430)
...+.+||++|++.++.++ ..++++++++|+|||+++ .+++.+...|+..+...... .++|+|||+
T Consensus 192 ~~~l~iwDt~GQe~~r~~w--~~yf~~a~~iIfV~dls~~d~~l~ed~~~nr~~e~~~~~~~i~~~~~~--~~~piiLv~ 267 (353)
T 1cip_A 192 DLHFKMFDVGGQRSERKKW--IHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWF--TDTSIILFL 267 (353)
T ss_dssp TEEEEEEEECCSGGGGGGG--GGGCTTCSEEEEEEEGGGGGCEETTEEEEEHHHHHHHHHHHHHTCGGG--TTSEEEEEE
T ss_pred CeeEEEEeCCCchhhhHHH--HHHHhcCCEEEEEEECccccccccccchhhhHHHHHHHHHHHHcCccc--cCCcEEEEE
Confidence 4678899999999999999 889999999999999999 56799999999998875322 279999999
Q ss_pred eCCCCCCc----------------cCcHHHHHHHHHH
Q 014101 403 AKDDLDSF----------------AMAIQDSTRVFTF 423 (430)
Q Consensus 403 nK~Dl~~~----------------~v~~~~~~~~~~~ 423 (430)
||+|+..+ .++.+++.++++.
T Consensus 268 NK~DL~~~ki~~~~l~~~fp~~~g~~~~~e~~~~~~~ 304 (353)
T 1cip_A 268 NKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQC 304 (353)
T ss_dssp ECHHHHHHHHTTSCGGGTCTTCCSCSCHHHHHHHHHH
T ss_pred ECcCchhhhccccchhhcccccCCCCCHHHHHHHHHH
Confidence 99999543 2567889998873
No 254
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.37 E-value=2.8e-12 Score=112.12 Aligned_cols=53 Identities=11% Similarity=0.163 Sum_probs=26.4
Q ss_pred HHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 59 LKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 59 l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
++++|+.+|.|+||.|+.+|+..++... +++..+++.+ |.+++| |+.+||..+
T Consensus 46 ~~~l~~~~D~~~~g~i~~~ef~~~~~~~-------~~~~~~F~~~------D~d~~G~i~~~el~~~ 99 (172)
T 2znd_A 46 VRSIISMFDRENKAGVNFSEFTGVWKYI-------TDWQNVFRTY------DRDNSGMIDKNELKQA 99 (172)
T ss_dssp HHHHHHHHCSSSSSEECHHHHHHHHHHH-------HHHHHHHHHH------CTTCSSEECHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHH------CCCCCCccCHHHHHHH
Confidence 3444555555555555555555443321 3344444444 444555 555555554
No 255
>1zun_B Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae PV} SCOP: b.43.3.1 b.44.1.1 c.37.1.8
Probab=99.36 E-value=2.3e-12 Score=130.09 Aligned_cols=133 Identities=16% Similarity=0.198 Sum_probs=88.0
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCC------------cCCCc---------------------cceEEEEEEEc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDN------------YTPTT---------------------DERYAVNVVDQ 329 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~------------~~~t~---------------------~~~~~~~~v~~ 329 (430)
+..++|+++|.+++|||||+++|++...... ...++ +.+.....+..
T Consensus 22 ~~~~~i~iiG~~~~GKSTLi~~Ll~~~~~i~~~~~~~i~~~s~~~gt~~~~~~~~~~~d~~~~E~~rGiTi~~~~~~~~~ 101 (434)
T 1zun_B 22 KEMLRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALLVDGLQAEREQGITIDVAYRYFST 101 (434)
T ss_dssp CEEEEEEEECCTTSSHHHHHHHHHHHTTCC------------------CCC--CHHHHHHHHC-----CCCCCEEEEEEC
T ss_pred CCceEEEEEECCCCCHHHHHHHHHhhcCCCchhhhhhhhhhhhccCccccchhhhhhhccChhHHHCCcEEEeeeeEeec
Confidence 4568999999999999999999976531100 00111 11112222333
Q ss_pred CCCeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC
Q 014101 330 PGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDS 409 (430)
Q Consensus 330 ~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~ 409 (430)
. ...+.+|||+|++.|.... ..++..+|++++|+|+++... .+..+++..+.... ..|+|+|+||+|+.+
T Consensus 102 ~--~~~~~iiDtpGh~~f~~~~--~~~~~~aD~~ilVvDa~~g~~-~qt~~~l~~~~~~~-----~~~iIvviNK~Dl~~ 171 (434)
T 1zun_B 102 A--KRKFIIADTPGHEQYTRNM--ATGASTCDLAIILVDARYGVQ-TQTRRHSYIASLLG-----IKHIVVAINKMDLNG 171 (434)
T ss_dssp S--SEEEEEEECCCSGGGHHHH--HHHHTTCSEEEEEEETTTCSC-HHHHHHHHHHHHTT-----CCEEEEEEECTTTTT
T ss_pred C--CceEEEEECCChHHHHHHH--HHHHhhCCEEEEEEECCCCCc-HHHHHHHHHHHHcC-----CCeEEEEEEcCcCCc
Confidence 3 4678899999999987766 567899999999999987542 33344544443331 236999999999986
Q ss_pred cc---C--cHHHHHHHHHHhC
Q 014101 410 FA---M--AIQDSTRVFTFLV 425 (430)
Q Consensus 410 ~~---v--~~~~~~~~~~~~g 425 (430)
.. . ..++..++++.+|
T Consensus 172 ~~~~~~~~i~~~~~~~~~~~g 192 (434)
T 1zun_B 172 FDERVFESIKADYLKFAEGIA 192 (434)
T ss_dssp SCHHHHHHHHHHHHHHHHTTT
T ss_pred ccHHHHHHHHHHHHHHHHHhC
Confidence 21 1 2456777777777
No 256
>1kk1_A EIF2gamma; initiation of translation; HET: GNP; 1.80A {Pyrococcus abyssi} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1kjz_A* 1kk2_A* 1kk3_A* 1kk0_A* 2d74_A 2dcu_A*
Probab=99.36 E-value=5.9e-12 Score=126.20 Aligned_cols=130 Identities=15% Similarity=0.164 Sum_probs=86.3
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCC---CCCCcCC--CccceEEEEEEEc-------------C--CC----eEEEEE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRP---FSDNYTP--TTDERYAVNVVDQ-------------P--GG----TKKTVV 338 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~---~~~~~~~--t~~~~~~~~~v~~-------------~--~~----~~~~~i 338 (430)
++.++|+++|..++|||||+++|++.. +.....+ |+...+....+.. + +. ...+.+
T Consensus 8 ~~~~~I~iiG~~~~GKSTLi~~L~g~~~~~~~~e~~~giTi~~~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~~~i~i 87 (410)
T 1kk1_A 8 QAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSF 87 (410)
T ss_dssp SEEEEEEEECSTTSSHHHHHHHHHTCCCC--CGGGGSCSSSCCEEEEEEEEECTTTCCEESSSBCTTTCCBCEEEEEEEE
T ss_pred CCccEEEEECCCCCCHHHHHHHHhCCccccChhhhcCCcEEEEeeeeeecccccccccccccccccccCcccccccEEEE
Confidence 567899999999999999999999653 2222223 4444443333221 1 11 267889
Q ss_pred EeCCChhHHHhhhccccccccccEEEEEEECCC----hhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc---
Q 014101 339 LREIPEEAVAKLLSNKDSLAACDIAVFVHDSSD----ESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA--- 411 (430)
Q Consensus 339 ~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~----~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~--- 411 (430)
||++|++.|.... ...+..+|++++|+|+++ +++.+.+.. +.... ..|+++|+||+|+.+..
T Consensus 88 iDtPGh~~f~~~~--~~~~~~~D~~ilVvda~~g~~~~qt~e~l~~----~~~~~-----~~~iivviNK~Dl~~~~~~~ 156 (410)
T 1kk1_A 88 IDAPGHEALMTTM--LAGASLMDGAILVIAANEPCPRPQTREHLMA----LQIIG-----QKNIIIAQNKIELVDKEKAL 156 (410)
T ss_dssp EECSSHHHHHHHH--HHCGGGCSEEEEEEETTSCSSCHHHHHHHHH----HHHHT-----CCCEEEEEECGGGSCHHHHH
T ss_pred EECCChHHHHHHH--HhhhhhCCEEEEEEECCCCCCChhHHHHHHH----HHHcC-----CCcEEEEEECccCCCHHHHH
Confidence 9999999987765 566788999999999985 344444432 22222 35899999999998743
Q ss_pred CcHHHHHHHHHH
Q 014101 412 MAIQDSTRVFTF 423 (430)
Q Consensus 412 v~~~~~~~~~~~ 423 (430)
...+++.++++.
T Consensus 157 ~~~~~i~~~l~~ 168 (410)
T 1kk1_A 157 ENYRQIKEFIEG 168 (410)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHh
Confidence 223455556554
No 257
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.36 E-value=3.1e-13 Score=109.01 Aligned_cols=99 Identities=17% Similarity=0.222 Sum_probs=76.6
Q ss_pred cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCC
Q 014101 87 FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRA 165 (430)
Q Consensus 87 ~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~ 165 (430)
++..+++++++.+++.+ | ++| |+|+||+.++..
T Consensus 2 l~~~~t~~e~~~~~~~~------d--~~g~i~~~eF~~~~~~-------------------------------------- 35 (108)
T 1rro_A 2 ITDILSAEDIAAALQEC------Q--DPDTFEPQKFFQTSGL-------------------------------------- 35 (108)
T ss_dssp GGGTSCHHHHHHHHHHT------C--STTCCCHHHHHHHHSG--------------------------------------
T ss_pred ccccCCHHHHHHHHHHc------c--CCCCcCHHHHHHHHhc--------------------------------------
Confidence 35567899999999887 3 567 999999987420
Q ss_pred CCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC--CCCCC---CCcccccccccCCcccchhhHHhhh
Q 014101 166 PDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP--ECPWD---EAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 166 ~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~--~~~~~---~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
+....+.++.+|+.||+|++|+|+.+||+.++...+ +.+.. ...+++.+|.|+||.|+|+||+..+
T Consensus 36 -------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~ 106 (108)
T 1rro_A 36 -------SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMV 106 (108)
T ss_dssp -------GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHH
T ss_pred -------CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 011234588999999999999999999999998763 22222 2356688999999999999999875
No 258
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.36 E-value=1.7e-13 Score=147.02 Aligned_cols=132 Identities=10% Similarity=0.087 Sum_probs=89.8
Q ss_pred HHHHHHHHHH--hhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhh-hcCCccCCC-cCHHhHHHHHHHHHH
Q 014101 55 CVRALKRIFI--LCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEK-LREGVNERG-LTLAGFLFLHALFIE 130 (430)
Q Consensus 55 ~~~~l~~~F~--~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~-~~~d~~~~g-i~~~eFl~~~~~~~~ 130 (430)
..+.|+++|. .||+|+||.|+..||..++. . ..++++.+++.++.. ...|.+++| |+|+||+.++....
T Consensus 144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~----~--~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~- 216 (799)
T 2zkm_X 144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFP----A--DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC- 216 (799)
T ss_dssp HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSC----S--CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS-
T ss_pred HHHHHHHHhHHhccCCCCCCeECHHHHHHHHh----h--hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc-
Confidence 3567999999 89999999999999987743 2 478888888887421 112356778 99999999876311
Q ss_pred cCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCC
Q 014101 131 KGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPEC 210 (430)
Q Consensus 131 ~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~ 210 (430)
+ .+.|+++|+.||+||+|+||.+||+.++....+.
T Consensus 217 ---------------------------~------------------r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge 251 (799)
T 2zkm_X 217 ---------------------------P------------------RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRD 251 (799)
T ss_dssp ---------------------------C------------------CHHHHTTCC--------CCCHHHHHHHHHHTCC-
T ss_pred ---------------------------C------------------HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCC
Confidence 0 1347899999999999999999999999865322
Q ss_pred C------------CCCCccccccccc----CCcccchhhHHhhh
Q 014101 211 P------------WDEAPYKDAAEKT----ALGGLSLDGFLSEW 238 (430)
Q Consensus 211 ~------------~~~~~~~~~~d~~----~dg~i~~~ef~~~w 238 (430)
+ .+..++++++|.| +||.|+|+||+...
T Consensus 252 ~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L 295 (799)
T 2zkm_X 252 SRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFL 295 (799)
T ss_dssp --------------CHHHHHHHHCCC--------CCHHHHHHHH
T ss_pred cccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcc
Confidence 2 2334677888988 89999999998773
No 259
>1wb1_A Translation elongation factor SELB; selenocysteine, protein synthesis, selenium, ribosome; HET: GDP DXC; 3.0A {Methanococcus maripaludis} SCOP: b.43.3.1 b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1wb2_A* 1wb3_A*
Probab=99.36 E-value=2.3e-12 Score=131.69 Aligned_cols=127 Identities=10% Similarity=0.144 Sum_probs=85.0
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCC-------CCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccc
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRP-------FSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDS 356 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~-------~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~ 356 (430)
+.++|+++|..++|||||+++|++.. ......+.++.+.....+.++ ...+.+||++|++.|.... ...
T Consensus 18 ~~~~I~iiG~~d~GKSTLi~~L~~~~~~~~~d~~~~e~~~GiTi~~~~~~~~~~--~~~i~iiDtPGh~~~~~~~--~~~ 93 (482)
T 1wb1_A 18 KNINLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLE--NYRITLVDAPGHADLIRAV--VSA 93 (482)
T ss_dssp EEEEEEEEECTTSSHHHHHHHHHTTC--------------------CCCEEEET--TEEEEECCCSSHHHHHHHH--HHH
T ss_pred CCCEEEEECCCCChHHHHHHHHHCCCcccccccccccccCccEEecceEEEEEC--CEEEEEEECCChHHHHHHH--HHH
Confidence 46899999999999999999999876 222222223332222334444 3678899999999987766 678
Q ss_pred cccccEEEEEEECCC---hhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc---CcHHHHHHHHHHh
Q 014101 357 LAACDIAVFVHDSSD---ESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA---MAIQDSTRVFTFL 424 (430)
Q Consensus 357 ~~~ad~vilv~D~t~---~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~---v~~~~~~~~~~~~ 424 (430)
+..+|++++|+|+++ +++++.+. .+... ++|+++|+||+|+.+.. ...+++.++++..
T Consensus 94 ~~~aD~~ilVvda~~g~~~qt~e~l~----~~~~~------~ip~IvviNK~Dl~~~~~~~~~~~~l~~~l~~~ 157 (482)
T 1wb1_A 94 ADIIDLALIVVDAKEGPKTQTGEHML----ILDHF------NIPIIVVITKSDNAGTEEIKRTEMIMKSILQST 157 (482)
T ss_dssp TTSCCEEEEEEETTTCSCHHHHHHHH----HHHHT------TCCBCEEEECTTSSCHHHHHHHHHHHHHHHHHS
T ss_pred HhhCCEEEEEEecCCCccHHHHHHHH----HHHHc------CCCEEEEEECCCcccchhHHHHHHHHHHHHhhh
Confidence 899999999999987 44544433 22222 58889999999998732 1244556666555
No 260
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.35 E-value=1.8e-12 Score=113.62 Aligned_cols=55 Identities=13% Similarity=0.161 Sum_probs=30.9
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
.++++|+.+|.|+||.|+.+|+..++... +++..+++.+ |.+++| |+.+||..++
T Consensus 48 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~~~F~~~------D~d~~G~i~~~el~~~l 103 (173)
T 1alv_A 48 TCRSMVAVMDSDTTGKLGFEEFKYLWNNI-------KKWQAIYKQF------DVDRSGTIGSSELPGAF 103 (173)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------HHHHHHHHHH------CTTCCSSBCTTTHHHHH
T ss_pred HHHHHHHHHcCCCCCccCHHHHHHHHHHH-------HHHHHHHHHH------CCCCCCCCCHHHHHHHH
Confidence 44555666666666666666665554421 3444555555 455556 6666665553
No 261
>3cb4_D GTP-binding protein LEPA; GTPase, OB-fold, membrane, nucleotide-binding, translation; 2.80A {Escherichia coli} PDB: 3deg_C*
Probab=99.35 E-value=2.2e-12 Score=134.47 Aligned_cols=134 Identities=16% Similarity=0.150 Sum_probs=88.3
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCC--CCC-----Cc------CCCccceEEEE--EEEc---CCCeEEEEEEeCCChh
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRP--FSD-----NY------TPTTDERYAVN--VVDQ---PGGTKKTVVLREIPEE 345 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~--~~~-----~~------~~t~~~~~~~~--~v~~---~~~~~~~~i~d~~G~e 345 (430)
+..+|+++|..++|||||+++|+... +.. .. ..+.|.+.... .+.+ ++....+.+|||+|+.
T Consensus 3 ~irnI~IiGh~d~GKTTLi~rLl~~tg~i~~~~~~~~~~D~~~~ErerGiTi~~~~~~~~~~~~~g~~~~l~liDTPGh~ 82 (599)
T 3cb4_D 3 NIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHV 82 (599)
T ss_dssp TEEEEEEECCC----CCHHHHHHHHTTC--------------------------CEEEEEEECTTSCEEEEEEEECCCCG
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHhcCCcccccccccccccchhhhcccceeeeeEEEEEEecCCCCeEEEEEEECCCch
Confidence 45799999999999999999997522 110 00 01122222222 2222 4445788899999999
Q ss_pred HHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhC
Q 014101 346 AVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLV 425 (430)
Q Consensus 346 ~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g 425 (430)
.|.... ...++.+|++++|+|+++..+++....|...... ++|+++|+||+|+.+.. ..+...++++.++
T Consensus 83 dF~~ev--~~~l~~aD~aILVVDa~~gv~~qt~~~~~~~~~~-------~ipiIvViNKiDl~~a~-~~~v~~ei~~~lg 152 (599)
T 3cb4_D 83 DFSYEV--SRSLAACEGALLVVDAGQGVEAQTLANCYTAMEM-------DLEVVPVLNKIDLPAAD-PERVAEEIEDIVG 152 (599)
T ss_dssp GGHHHH--HHHHHHCSEEEEEEETTTCCCTHHHHHHHHHHHT-------TCEEEEEEECTTSTTCC-HHHHHHHHHHHTC
T ss_pred HHHHHH--HHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHC-------CCCEEEeeeccCccccc-HHHHHHHHHHHhC
Confidence 988776 6788999999999999988777777777665532 68999999999998743 3344566777766
Q ss_pred Cc
Q 014101 426 MV 427 (430)
Q Consensus 426 ~~ 427 (430)
+.
T Consensus 153 ~~ 154 (599)
T 3cb4_D 153 ID 154 (599)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 262
>3izy_P Translation initiation factor IF-2, mitochondrial; E coli, RNA, ribosomal; 10.80A {Bos taurus}
Probab=99.35 E-value=3.8e-14 Score=145.67 Aligned_cols=116 Identities=16% Similarity=0.191 Sum_probs=89.2
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEE
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAV 364 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vi 364 (430)
.++|+++|.+|+|||||+++|.+..+.....++++.++....+.++++ ..+.+|||+|++.|..+. ..+++.+|+++
T Consensus 4 ~pkV~IvG~~~vGKTSLl~~L~~~~~~~~~~~giT~~i~~~~v~~~~g-~~i~~iDTPGhe~f~~~~--~~~~~~aD~vI 80 (537)
T 3izy_P 4 SPVVTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSG-EKITFLDTPGHAAFSAMR--ARGTQVTDIVI 80 (537)
T ss_dssp CCBCEEEESTTTTHHHHHHHHHHHHHHHSSSCCBCCCTTSCCBCSSCS-SCCBCEECSSSCCTTTSB--BSSSBSBSSCE
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCcccccCCceeEEEeEEEEEeCCC-CEEEEEECCChHHHHHHH--HHHHccCCEEE
Confidence 468999999999999999999988776666666666555555555422 367799999999999887 67889999999
Q ss_pred EEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 365 FVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 365 lv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+|+|+++..+.+.... +..+... ++|+++|+||+|+.+.
T Consensus 81 LVVDa~dg~~~qt~e~-l~~~~~~------~vPiIVViNKiDl~~~ 119 (537)
T 3izy_P 81 LVVAADDGVMKQTVES-IQHAKDA------HVPIVLAINKCDKAEA 119 (537)
T ss_dssp EECBSSSCCCHHHHHH-HHHHHTT------TCCEEECCBSGGGTTT
T ss_pred EEEECCCCccHHHHHH-HHHHHHc------CCcEEEEEeccccccc
Confidence 9999998655544433 3333322 6899999999999753
No 263
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.34 E-value=3.7e-13 Score=108.74 Aligned_cols=99 Identities=17% Similarity=0.216 Sum_probs=76.1
Q ss_pred CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCC
Q 014101 88 NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAP 166 (430)
Q Consensus 88 g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~ 166 (430)
|..++++++..+++.+ |. +| |+|+||+.++..
T Consensus 3 ~~~~s~~ei~~~~~~~------d~--~g~i~~~eF~~~~~~--------------------------------------- 35 (109)
T 5pal_A 3 TKVLKADDINKAISAF------KD--PGTFDYKRFFHLVGL--------------------------------------- 35 (109)
T ss_dssp GGTSCHHHHHHHHHHT------CS--TTCCCHHHHHHHHTC---------------------------------------
T ss_pred CCcCCHHHHHHHHHHh------CC--CCcCcHHHHHHHHhh---------------------------------------
Confidence 5568899999999988 33 56 999999997530
Q ss_pred CCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC---CCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 167 DQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA---PECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 167 ~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~---~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.....+.++.+|+.||+|++|+|+.+||+.++... +..+ .....+++.+|.|+||.|+|+||+..+.
T Consensus 36 ------~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 36 ------KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp ------TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred ------ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 01123458899999999999999999999999764 2221 1223567889999999999999998753
No 264
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.34 E-value=1.4e-13 Score=111.11 Aligned_cols=99 Identities=15% Similarity=0.226 Sum_probs=76.2
Q ss_pred CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCC
Q 014101 88 NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAP 166 (430)
Q Consensus 88 g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~ 166 (430)
|..++++++..+++.+ | ++| |+|+||+.++..
T Consensus 3 g~~~t~~e~~~~~~~~------d--~~g~i~~~eF~~~~~~--------------------------------------- 35 (109)
T 1rwy_A 3 TDLLSAEDIKKAIGAF------T--AADSFDHKKFFQMVGL--------------------------------------- 35 (109)
T ss_dssp HHHSCHHHHHHHHHTT------C--STTCCCHHHHHHHHTG---------------------------------------
T ss_pred CCcCCHHHHHHHHHHc------C--CCCcEeHHHHHHHHhc---------------------------------------
Confidence 4557889999998887 4 567 999999987520
Q ss_pred CCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC--CCCC---CCCcccccccccCCcccchhhHHhhhh
Q 014101 167 DQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP--ECPW---DEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 167 ~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~--~~~~---~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+....+.++.+|+.||+|++|+|+.+||+.++...+ +.+. ....+++.+|.|+||.|+|+||+..+.
T Consensus 36 ------~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 36 ------KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp ------GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred ------CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 011234588999999999999999999999998652 2221 223567889999999999999998754
No 265
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=99.34 E-value=2.3e-12 Score=106.07 Aligned_cols=69 Identities=16% Similarity=0.228 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHH----hcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 53 PRCVRALKRIFILCDHDRDGALSDAELNDFQVK----CFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~----~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
+..+..|+++|+.||.| ||+||.+||+.++++ .+|...+++++..|++.+ |.|++| |+|+||+.++..
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~------D~d~DG~IdF~EF~~lm~~ 83 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDL------DQCRDGKVGFQSFFSLIAG 83 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHH------CTTCSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHH------cCCCCCcCcHHHHHHHHHH
Confidence 66789999999999999 899999999999764 258888999999999999 789999 999999999874
Q ss_pred H
Q 014101 128 F 128 (430)
Q Consensus 128 ~ 128 (430)
.
T Consensus 84 l 84 (121)
T 4drw_A 84 L 84 (121)
T ss_dssp H
T ss_pred H
Confidence 3
No 266
>3tr5_A RF-3, peptide chain release factor 3; protein synthesis, translation; HET: GDP; 2.11A {Coxiella burnetii}
Probab=99.33 E-value=1.5e-12 Score=134.21 Aligned_cols=132 Identities=14% Similarity=0.021 Sum_probs=91.6
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCC---------------Cc-------CCCccceEEEEEEEcCCCeEEEEEEeC
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSD---------------NY-------TPTTDERYAVNVVDQPGGTKKTVVLRE 341 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~---------------~~-------~~t~~~~~~~~~v~~~~~~~~~~i~d~ 341 (430)
...+|+|+|.+|||||||+++|+...... .. .+.++.......+.+. ...+.+|||
T Consensus 12 ~~r~IaIiG~~~aGKTTL~~~Ll~~~g~i~~~g~v~~~~~~~~~~~d~~~~e~~~GiTi~~~~~~~~~~--~~~i~liDT 89 (528)
T 3tr5_A 12 MRRTFAIISHPDAGKTTLTEKLLLFGGAIQLAGTIKSRKAARHATSDWMELEKQRGISVTTSVMQFPYK--DYLINLLDT 89 (528)
T ss_dssp TEEEEEEEECTTSSHHHHHHHHHHHTTCHHHHHHHHTC----CCHHHHHHHHHHHCCSSSSSEEEEEET--TEEEEEECC
T ss_pred cCCEEEEECCCCCcHHHHHHHHHhhcCCcccceeeeccccccceecccchhhhcCCeeEEEeEEEEEeC--CEEEEEEEC
Confidence 35699999999999999999996111000 00 0112222222334444 467889999
Q ss_pred CChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHH
Q 014101 342 IPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVF 421 (430)
Q Consensus 342 ~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~ 421 (430)
+|+..|.... ..+++.+|++++|+|+++..+......| ..+... ++|+++|+||+|+... ...+...++.
T Consensus 90 PG~~df~~~~--~~~l~~aD~allVvDa~~g~~~~t~~~~-~~~~~~------~iPiivviNK~Dl~~~-~~~~~l~ei~ 159 (528)
T 3tr5_A 90 PGHADFTEDT--YRTLTAVDSALMVIDAAKGVEPRTIKLM-EVCRLR------HTPIMTFINKMDRDTR-PSIELLDEIE 159 (528)
T ss_dssp CCSTTCCHHH--HHGGGGCSEEEEEEETTTCSCHHHHHHH-HHHHTT------TCCEEEEEECTTSCCS-CHHHHHHHHH
T ss_pred CCchhHHHHH--HHHHHhCCEEEEEEeCCCCCCHHHHHHH-HHHHHc------CCCEEEEEeCCCCccc-cHHHHHHHHH
Confidence 9999888776 6788999999999999987666665544 334332 6899999999999763 3345567777
Q ss_pred HHhCCc
Q 014101 422 TFLVMV 427 (430)
Q Consensus 422 ~~~g~~ 427 (430)
+.++..
T Consensus 160 ~~l~~~ 165 (528)
T 3tr5_A 160 SILRIH 165 (528)
T ss_dssp HHHCCE
T ss_pred HhhCCC
Confidence 777753
No 267
>3izq_1 HBS1P, elongation factor 1 alpha-like protein; NO-GO mRNA decay, ribosomal protein,hydrolase; 9.50A {Saccharomyces cerevisiae}
Probab=99.33 E-value=4.6e-12 Score=132.81 Aligned_cols=136 Identities=14% Similarity=0.106 Sum_probs=88.4
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCc-------------------------------CCCccceEEEEEEEcC
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNY-------------------------------TPTTDERYAVNVVDQP 330 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~-------------------------------~~t~~~~~~~~~v~~~ 330 (430)
.+..+||+++|.+|||||||+++|++....... .+.++.+.....+...
T Consensus 164 ~k~~lkV~ivG~~n~GKSTLin~Ll~~~~~i~~~~i~~~~~~~~~~g~~~~~~a~~~d~~~~e~~~GiTid~~~~~~~~~ 243 (611)
T 3izq_1 164 ALPHLSFVVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERGVTVSICTSHFSTH 243 (611)
T ss_dssp CCCCCEEEEECCSSSCHHHHHHHHHSCSSCSCCHHHHHHHHHSSCSSSSCCSSSHHHHHHHHHHHTTTCCSCSCCEEECS
T ss_pred cCCceEEEEEECCCCCHHHHHHHHHHhcCCccHHHHHHHHhhhhhccccccceeeeeccchhhhhCCeeEeeeeEEEecC
Confidence 356789999999999999999999976432221 0122222222334444
Q ss_pred CCeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChh---hH---HHHHHHHHHHHhcCCCCCCCCcEEEEEeC
Q 014101 331 GGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDES---SW---KRATELLVEVASYGEDTGFEVPCLIVAAK 404 (430)
Q Consensus 331 ~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~---S~---~~~~~~l~~l~~~~~~~~~~~PiilVgnK 404 (430)
...+.+|||+|++.|.... ..+++.+|++|+|+|+++.. +| ....+.+..+.... ..|+|||+||
T Consensus 244 --~~~~~iiDTPG~e~f~~~~--~~~~~~aD~~llVVDa~~g~~e~~~~~~~qt~e~l~~~~~lg-----i~~iIVVvNK 314 (611)
T 3izq_1 244 --RANFTIVDAPGHRDFVPNA--IMGISQADMAILCVDCSTNAFESGFDLDGQTKEHMLLASSLG-----IHNLIIAMNK 314 (611)
T ss_dssp --SCEEEEEECCSSSCHHHHH--TTTSSCCSEEEEEEECSHHHHHTTCCTTSHHHHHHHHHHTTT-----CCEEEEEEEC
T ss_pred --CceEEEEECCCCcccHHHH--HHHHhhcCceEEEEECCCCcccccchhhhHHHHHHHHHHHcC-----CCeEEEEEec
Confidence 4567899999999988777 67889999999999998732 11 12222222222221 2459999999
Q ss_pred CCCCCcc-C----cHHHHHHHHHHhCC
Q 014101 405 DDLDSFA-M----AIQDSTRVFTFLVM 426 (430)
Q Consensus 405 ~Dl~~~~-v----~~~~~~~~~~~~g~ 426 (430)
+|+.+.. . ...++..+...+|+
T Consensus 315 iDl~~~~~~~~~ei~~~l~~~l~~~g~ 341 (611)
T 3izq_1 315 MDNVDWSQQRFEEIKSKLLPYLVDIGF 341 (611)
T ss_dssp TTTTTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccchhHHHHHHHHHHHHHHHHhhcc
Confidence 9998721 1 13455556665554
No 268
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=99.32 E-value=4.6e-12 Score=128.09 Aligned_cols=118 Identities=19% Similarity=0.196 Sum_probs=76.6
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCC-cCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhh----------c
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDN-YTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLL----------S 352 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~-~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~----------~ 352 (430)
..+||+++|++|||||||+|++++...... ..++++.+.....+.++| ..+.+|||+|........ .
T Consensus 179 ~~~kvaivG~~gvGKSTLln~l~g~~~~~v~~~~gtT~d~~~~~i~~~g--~~~~l~Dt~G~~~~~~~~~~~~e~~~~~~ 256 (439)
T 1mky_A 179 DAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDG--RKYVFVDTAGLRRKSRVEPRTVEKYSNYR 256 (439)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHTSTTEEECCCC------CCEEEEETT--EEEEESSCSCC-----------CCSCCHH
T ss_pred cCceEEEECCCCCCHHHHHHHHhCCcccccCCCCCCcCCceEEEEEECC--EEEEEEECCCCccccccchhhHHHHHHHH
Confidence 468999999999999999999999875322 224444444445566664 356789999974433211 1
Q ss_pred cccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 353 NKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 353 ~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
...+++.+|++++|+|+++..+.... .+...+... +.|+++|+||+|+.+.
T Consensus 257 ~~~~i~~ad~vllv~d~~~~~~~~~~-~i~~~l~~~------~~~~ilv~NK~Dl~~~ 307 (439)
T 1mky_A 257 VVDSIEKADVVVIVLDATQGITRQDQ-RMAGLMERR------GRASVVVFNKWDLVVH 307 (439)
T ss_dssp HHHHHHHCSEEEEEEETTTCCCHHHH-HHHHHHHHT------TCEEEEEEECGGGSTT
T ss_pred HHHHHhhCCEEEEEEeCCCCCCHHHH-HHHHHHHHc------CCCEEEEEECccCCCc
Confidence 12456789999999999986665542 222333322 6899999999999764
No 269
>2ywe_A GTP-binding protein LEPA; G domain, beta-barrel, ferredoxin-like domain, structural GE NPPSFA; 2.05A {Aquifex aeolicus} PDB: 2ywf_A* 2ywg_A* 2ywh_A*
Probab=99.32 E-value=1.2e-11 Score=128.70 Aligned_cols=133 Identities=19% Similarity=0.172 Sum_probs=89.4
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCC--CCC-----CcCC------CccceE----EEEEEEc-CCCeEEEEEEeCCChh
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRP--FSD-----NYTP------TTDERY----AVNVVDQ-PGGTKKTVVLREIPEE 345 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~--~~~-----~~~~------t~~~~~----~~~~v~~-~~~~~~~~i~d~~G~e 345 (430)
...+|+++|..++|||||+++++... +.. .... ..|.+. ....+.. ++....+.+|||+|+.
T Consensus 5 ~irnI~IiGh~d~GKTTLi~rLl~~tg~i~~~~~~~~~~D~~~~ErerGITI~~~~~~~~~~~~dg~~~~inliDTPGh~ 84 (600)
T 2ywe_A 5 NVRNFCIIAHVDHGKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDGNTYKLHLIDTPGHV 84 (600)
T ss_dssp GEEEEEEECC--CCHHHHHHHHHHHHTC-----------------------CCCCSEEEEEECTTSCEEEEEEECCCCSG
T ss_pred CceEEEEECCCCCCHHHHHHHHHhccCCcccccccccccccchhhhcccceeeeeEEEEEEEcCCCCeEEEEEEECCCcH
Confidence 45799999999999999999997521 110 0000 011111 1111221 3345778899999999
Q ss_pred HHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhC
Q 014101 346 AVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLV 425 (430)
Q Consensus 346 ~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g 425 (430)
.|.... ...++.+|++++|+|+++..+.+....|...... ++|+++|+||+|+.... ......++++.+|
T Consensus 85 dF~~ev--~r~l~~aD~aILVVDa~~gv~~qt~~~~~~a~~~-------~ipiIvviNKiDl~~a~-~~~v~~el~~~lg 154 (600)
T 2ywe_A 85 DFSYEV--SRALAACEGALLLIDASQGIEAQTVANFWKAVEQ-------DLVIIPVINKIDLPSAD-VDRVKKQIEEVLG 154 (600)
T ss_dssp GGHHHH--HHHHHTCSEEEEEEETTTBCCHHHHHHHHHHHHT-------TCEEEEEEECTTSTTCC-HHHHHHHHHHTSC
T ss_pred hHHHHH--HHHHHhCCEEEEEEECCCCccHHHHHHHHHHHHC-------CCCEEEEEeccCccccC-HHHHHHHHHHhhC
Confidence 988766 5678999999999999998888877777665531 68999999999998743 2344566666666
Q ss_pred C
Q 014101 426 M 426 (430)
Q Consensus 426 ~ 426 (430)
+
T Consensus 155 ~ 155 (600)
T 2ywe_A 155 L 155 (600)
T ss_dssp C
T ss_pred C
Confidence 5
No 270
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.32 E-value=7.6e-12 Score=111.63 Aligned_cols=123 Identities=14% Similarity=0.152 Sum_probs=94.1
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
..+.++|+.+|.|+||.|+.+|+..++... +++..+++.+ |.+++| |+.+||..++..
T Consensus 63 ~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~-------~~~~~~F~~~------D~d~~G~i~~~e~~~~l~~-------- 121 (191)
T 1y1x_A 63 ATTEKLLHMYDKNHSGEITFDEFKDLHHFI-------LSMREGFRKR------DSSGDGRLDSNEVRAALLS-------- 121 (191)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------HHHHHHHHHH------CTTSSSCBCHHHHHHHHHT--------
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHH-------HHHHHHHHHh------CCCCCCeEcHHHHHHHHHH--------
Confidence 467788999999999999999998886542 5677777777 678889 999999987531
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCC
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEA 215 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~ 215 (430)
+|+ .++ .+.+..+|+.+|.|+||.|+.+|+..++..... ..
T Consensus 122 --------~g~------------------------~~~---~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~----~~ 162 (191)
T 1y1x_A 122 --------SGY------------------------QVS---EQTFQALMRKFDRQRRGSLGFDDYVELSIFVCR----VR 162 (191)
T ss_dssp --------TSC------------------------CCC---HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHH----HH
T ss_pred --------hCC------------------------CCC---HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHHHH----HH
Confidence 110 111 234778999999999999999999998885311 12
Q ss_pred cccccccccCCcc--cchhhHHhhhh
Q 014101 216 PYKDAAEKTALGG--LSLDGFLSEWA 239 (430)
Q Consensus 216 ~~~~~~d~~~dg~--i~~~ef~~~w~ 239 (430)
...+..|.|+||. ++++||+..-.
T Consensus 163 ~~F~~~D~d~dG~i~~~~~eF~~~~~ 188 (191)
T 1y1x_A 163 NVFAFYDRERTGQVTFTFDTFIGGSV 188 (191)
T ss_dssp HHHHHHCTTCCSEEEEEHHHHHHHHH
T ss_pred HHHHHhCcCCCceEEeeHHHHHHHHH
Confidence 3556789999999 68999987644
No 271
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=99.31 E-value=2.3e-13 Score=109.77 Aligned_cols=99 Identities=17% Similarity=0.270 Sum_probs=75.5
Q ss_pred cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCC
Q 014101 87 FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRA 165 (430)
Q Consensus 87 ~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~ 165 (430)
+|..+++++++.+++.+ | ++| |+|+||+.++.. .
T Consensus 2 l~~~~~~~e~~~l~~~~------d--~~g~i~~~eF~~~~~~-----------------------------------~-- 36 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDC------Q--APDSFSPKKFFQISGM-----------------------------------S-- 36 (108)
T ss_dssp TTSSSCHHHHHHHHTTS------C--STTTCCHHHHHHHHTC-----------------------------------T--
T ss_pred ccccCCHHHHHHHHHHc------C--CCCcCCHHHHHHHHhh-----------------------------------C--
Confidence 46668889999888876 3 567 999999987520 0
Q ss_pred CCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC---CCCC--CCCCcccccccccCCcccchhhHHhhh
Q 014101 166 PDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA---PECP--WDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 166 ~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~---~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
. ...+.++.+|+.||+|++|+|+.+||+.++... +..+ .....+++.+|.|+||.|+|+||+..+
T Consensus 37 ~--------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~ 106 (108)
T 2kyc_A 37 K--------KSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMV 106 (108)
T ss_dssp T--------CCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHH
T ss_pred c--------ccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 0 001237899999999999999999999998864 2211 333467789999999999999999875
No 272
>2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A*
Probab=99.30 E-value=6e-12 Score=120.30 Aligned_cols=120 Identities=20% Similarity=0.183 Sum_probs=77.1
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCc------CCCc-----------------c---ceE--------------
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNY------TPTT-----------------D---ERY-------------- 322 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~------~~t~-----------------~---~~~-------------- 322 (430)
...++|+|+|.+|||||||+|+|++..+.+.. .|+. | .++
T Consensus 24 ~~~~~i~vvG~~~~GKSSLln~l~g~~~~~~~~~~~t~~p~~~~~~~~~~~~~~~~~~~g~~~tt~~~~~~~~~~~~~~i 103 (299)
T 2aka_B 24 LDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRV 103 (299)
T ss_dssp CCCCEEEEEEBTTSCHHHHHHHHHTSCCSCCCSSCSCSSCEEEEEEECSSCEEEETTSTTCCBCCHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHCCCcCCCCCCcccccceEEEEecCCcccchhhhcCCcccCCHHHHHHHHHHHHHHh
Confidence 35679999999999999999999999875221 1220 0 000
Q ss_pred -----------EEEEEEcCCCeEEEEEEeCCChh-------------HHHhhhccccccccccEEE-EEEECCChhhHHH
Q 014101 323 -----------AVNVVDQPGGTKKTVVLREIPEE-------------AVAKLLSNKDSLAACDIAV-FVHDSSDESSWKR 377 (430)
Q Consensus 323 -----------~~~~v~~~~~~~~~~i~d~~G~e-------------~~~~~~~~~~~~~~ad~vi-lv~D~t~~~S~~~ 377 (430)
....+..+ ....+.+|||+|.. .+..+. ..+++.++.++ +|+|+++..+...
T Consensus 104 ~g~~~gi~~~~~~~~~~~~-~~~~l~lvDtpG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~il~v~d~~~~~~~~~ 180 (299)
T 2aka_B 104 TGTNKGISPVPINLRVYSP-HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDML--MQFVTKENCLILAVSPANSDLANSD 180 (299)
T ss_dssp CSSTTCCCSCCEEEEEEET-TCCSEEEEECCCBCSSCCSSSCTTHHHHHHHHH--HHHHTSTTEEEEEEEESSSCGGGCH
T ss_pred cccCCCccccceEEEEeCC-CCCCceEEeCCCCCCCcCCCCCchHHHHHHHHH--HHHHcCCCeEEEEEecCCcchhhhH
Confidence 00000111 12467899999952 344444 56778888766 7999987544444
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc
Q 014101 378 ATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA 411 (430)
Q Consensus 378 ~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~ 411 (430)
...++..+.. .+.|+++|+||+|+.+..
T Consensus 181 ~~~~~~~~~~------~~~~~i~V~NK~Dl~~~~ 208 (299)
T 2aka_B 181 ALKIAKEVDP------QGQRTIGVITKLDLMDEG 208 (299)
T ss_dssp HHHHHHHHCT------TCSSEEEEEECGGGSCTT
T ss_pred HHHHHHHhCC------CCCeEEEEEEccccCCCC
Confidence 3345554432 168999999999997643
No 273
>1r5b_A Eukaryotic peptide chain release factor GTP-bindi subunit; translation termination, peptide release, GTPase, translatio; 2.35A {Schizosaccharomyces pombe} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1r5n_A* 1r5o_A* 3e20_A
Probab=99.30 E-value=4e-12 Score=129.44 Aligned_cols=134 Identities=14% Similarity=0.140 Sum_probs=76.3
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhC--CCCCC----------------------Cc-------CCCccceEEEEEEEcCC
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLG--RPFSD----------------------NY-------TPTTDERYAVNVVDQPG 331 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~--~~~~~----------------------~~-------~~t~~~~~~~~~v~~~~ 331 (430)
++.++|+++|..++|||||+++|+. +.+.. .. ...++.+.....+.++
T Consensus 41 k~~~~i~iiG~vd~GKSTLi~~Ll~~~g~~~~~~~~~~~~~~~~~G~~~~~~~~~~D~~~~er~~giTi~~~~~~~~~~- 119 (467)
T 1r5b_A 41 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETE- 119 (467)
T ss_dssp CEEEEEEEEECGGGTHHHHHHHHHHHTTSSCHHHHHHHHHHTCC----------------------------CCEEECS-
T ss_pred CCeeEEEEEECCCCCHHHHHHHHHHHhCCCChHHHHHHHhHHHhcCCcchhhhhhcccchhhhhcCceEEeeeEEEecC-
Confidence 4568999999999999999999964 21110 00 0111111211234444
Q ss_pred CeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCCh---hhHHH---HHHHHHHHHhcCCCCCCCCc-EEEEEeC
Q 014101 332 GTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDE---SSWKR---ATELLVEVASYGEDTGFEVP-CLIVAAK 404 (430)
Q Consensus 332 ~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~---~S~~~---~~~~l~~l~~~~~~~~~~~P-iilVgnK 404 (430)
...+.+||++|++.|.... ...++.+|++|+|+|+++. .||+. ..+.+..+... ++| +|+|+||
T Consensus 120 -~~~~~iiDtPGh~~f~~~~--~~~~~~aD~~ilVvDa~~g~~e~sf~~~~qt~e~l~~~~~~------~vp~iivviNK 190 (467)
T 1r5b_A 120 -HRRFSLLDAPGHKGYVTNM--INGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQ------GINHLVVVINK 190 (467)
T ss_dssp -SEEEEECCCCC-------------TTSCSEEEEEEECSTTHHHHTTSTTCCHHHHHHHHHHT------TCSSEEEEEEC
T ss_pred -CeEEEEEECCCcHHHHHHH--HhhcccCCEEEEEEeCCcCccccccCCCCcHHHHHHHHHHc------CCCEEEEEEEC
Confidence 3678899999999988766 6778999999999999985 34432 22222222221 577 9999999
Q ss_pred CCCCCcc-------CcHHHHHHHHHHh-CC
Q 014101 405 DDLDSFA-------MAIQDSTRVFTFL-VM 426 (430)
Q Consensus 405 ~Dl~~~~-------v~~~~~~~~~~~~-g~ 426 (430)
+|+.... ....++.++++.+ |+
T Consensus 191 ~Dl~~~~~~~~~~~~i~~e~~~~l~~~~g~ 220 (467)
T 1r5b_A 191 MDEPSVQWSEERYKECVDKLSMFLRRVAGY 220 (467)
T ss_dssp TTSTTCSSCHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccCCCccccHHHHHHHHHHHHHHHHHhcCC
Confidence 9996521 1234577777766 53
No 274
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.30 E-value=7.2e-12 Score=108.71 Aligned_cols=60 Identities=18% Similarity=0.313 Sum_probs=37.5
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
..++++|+.||+|+||.|+.+||..++.. .|.+++++++..+++.+ +++| |+|+||+.++
T Consensus 70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~--------d~dg~i~~~eF~~~~ 130 (165)
T 1k94_A 70 NAWKENFMTVDQDGSGTVEHHELRQAIGL-MGYRLSPQTLTTIVKRY--------SKNGRIFFDDYVACC 130 (165)
T ss_dssp HHHHHHHHHHCTTCCSBCCHHHHHHHHHH-TTCCCCHHHHHHHHHHH--------CBTTBCBHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceECHHHHHHHHHH-hCCCCCHHHHHHHHHHh--------CCCCeEcHHHHHHHH
Confidence 45566666666666666666666666554 35666666666666654 2345 6666666654
No 275
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=99.29 E-value=4.2e-12 Score=109.08 Aligned_cols=67 Identities=16% Similarity=0.241 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 53 PRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
+.+...++++|+.||+|+||.|+.+||..++.. +|..++++++..+++.+ |.+++| |+|+||+.++.
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~e~~~l~~~~------D~d~dg~I~~~eF~~~~~ 113 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK-LGVPKTHLEMKKMISEV------TGGVSDTISYRDFVNMML 113 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHH-TTCCCCHHHHHHHHHHH------HTTSCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHH------CCCCCCcEeHHHHHHHHH
Confidence 678899999999999999999999999999776 58889999999999998 567888 99999999864
No 276
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=99.29 E-value=5.4e-12 Score=113.98 Aligned_cols=129 Identities=14% Similarity=0.076 Sum_probs=78.3
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChh----------HHHhhhc
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEE----------AVAKLLS 352 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e----------~~~~~~~ 352 (430)
....+|+++|++|||||||++++++..+.....++.|.......+.+.+ ...+||++|.. .+....
T Consensus 24 ~~~~~v~lvG~~g~GKSTLl~~l~g~~~~~~~~~~~G~~~~~~~~~~~~---~~~l~Dt~G~~~~~~~~~~~~~~~~~~- 99 (210)
T 1pui_A 24 DTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD---GKRLVDLPGYGYAEVPEEMKRKWQRAL- 99 (210)
T ss_dssp SCSEEEEEEECTTSSHHHHHTTTCCC-------------CCEEEEEEET---TEEEEECCCCC------CCHHHHHHHH-
T ss_pred CCCcEEEEECCCCCCHHHHHHHHhCCCccccccCCCccceeeEEEEecC---CEEEEECcCCcccccCHHHHHHHHHHH-
Confidence 4567999999999999999999998875444446666554444444442 35689999963 223222
Q ss_pred ccccc---ccccEEEEEEECCChhhHH--HHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc--C-cHHHHHHHHHHh
Q 014101 353 NKDSL---AACDIAVFVHDSSDESSWK--RATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA--M-AIQDSTRVFTFL 424 (430)
Q Consensus 353 ~~~~~---~~ad~vilv~D~t~~~S~~--~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~--v-~~~~~~~~~~~~ 424 (430)
..++ ..++++++++|++++.++. .+..|+. .. ++|+++|+||+|+.... . ....+.+++.+.
T Consensus 100 -~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~---~~------~~~~~~v~nK~D~~s~~~~~~~~~~~~~~~~~~ 169 (210)
T 1pui_A 100 -GEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAV---DS------NIAVLVLLTKADKLASGARKAQLNMVREAVLAF 169 (210)
T ss_dssp -HHHHHHCTTEEEEEEEEETTSCCCHHHHHHHHHHH---HT------TCCEEEEEECGGGSCHHHHHHHHHHHHHHHGGG
T ss_pred -HHHHHhhhcccEEEEEEECCCCCchhHHHHHHHHH---Hc------CCCeEEEEecccCCCchhHHHHHHHHHHHHHhc
Confidence 1222 5789999999999865553 2333332 11 68999999999987632 1 235666666554
Q ss_pred C
Q 014101 425 V 425 (430)
Q Consensus 425 g 425 (430)
+
T Consensus 170 ~ 170 (210)
T 1pui_A 170 N 170 (210)
T ss_dssp C
T ss_pred C
Confidence 4
No 277
>1f60_A Elongation factor EEF1A; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1g7c_A* 1ije_A* 1ijf_A* 2b7b_A* 2b7c_A
Probab=99.29 E-value=5.2e-12 Score=128.28 Aligned_cols=134 Identities=11% Similarity=0.114 Sum_probs=88.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCC--CCCCC-----------------------c------CCCccceEEEEEEEcCC
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGR--PFSDN-----------------------Y------TPTTDERYAVNVVDQPG 331 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~--~~~~~-----------------------~------~~t~~~~~~~~~v~~~~ 331 (430)
.+.++|+++|.+++|||||+++|++. .+... . ...++.+.....+..+
T Consensus 5 ~~~~~i~iiG~~~~GKSTLi~~Ll~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~d~~~~er~~GiTi~~~~~~~~~~- 83 (458)
T 1f60_A 5 KSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETP- 83 (458)
T ss_dssp CEEEEEEEEECTTSCHHHHHHHHHHHHSCSSHHHHHHHHHHGGGGSSSCCCHHHHHHHHHHHHHTTCCCSCSCEEEECS-
T ss_pred CceeEEEEEcCCCCCHHHHHHHHHHHcCCcChHHHHHhhhhHHhcCCcchhhhhhhccchhHHhcCcEEEEEEEEEecC-
Confidence 35689999999999999999999864 12110 0 0112222222334444
Q ss_pred CeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChh---hHH---HHHHHHHHHHhcCCCCCCCCc-EEEEEeC
Q 014101 332 GTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDES---SWK---RATELLVEVASYGEDTGFEVP-CLIVAAK 404 (430)
Q Consensus 332 ~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~---S~~---~~~~~l~~l~~~~~~~~~~~P-iilVgnK 404 (430)
...+.+|||+|++.|.... ...++.+|++|+|+|+++.. +|+ +..+++..+... ++| +|+|+||
T Consensus 84 -~~~~~iiDtPGh~~f~~~~--~~~~~~aD~~ilVvda~~g~~~~sf~~~~qt~~~~~~~~~~------~v~~iivviNK 154 (458)
T 1f60_A 84 -KYQVTVIDAPGHRDFIKNM--ITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTL------GVRQLIVAVNK 154 (458)
T ss_dssp -SEEEEEEECCCCTTHHHHH--HHSSSCCSEEEEEEECSHHHHHHHTCTTSHHHHHHHHHHHT------TCCEEEEEEEC
T ss_pred -CceEEEEECCCcHHHHHHH--HhhhhhCCEEEEEEeCCcCccccccCcchhHHHHHHHHHHc------CCCeEEEEEEc
Confidence 4678899999999988776 67889999999999998742 332 333333333322 455 9999999
Q ss_pred CCCCC--cc---CcHHHHHHHHHHhCC
Q 014101 405 DDLDS--FA---MAIQDSTRVFTFLVM 426 (430)
Q Consensus 405 ~Dl~~--~~---v~~~~~~~~~~~~g~ 426 (430)
+|+.+ .. ...+++.++++.+++
T Consensus 155 ~Dl~~~~~~~~~~i~~~~~~~l~~~g~ 181 (458)
T 1f60_A 155 MDSVKWDESRFQEIVKETSNFIKKVGY 181 (458)
T ss_dssp GGGGTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred cccccCCHHHHHHHHHHHHHHHHHcCC
Confidence 99974 11 224567777777763
No 278
>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*
Probab=99.28 E-value=5.8e-12 Score=124.06 Aligned_cols=138 Identities=13% Similarity=0.074 Sum_probs=85.0
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccce-EE---------------------------------------
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDER-YA--------------------------------------- 323 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~-~~--------------------------------------- 323 (430)
...+|+|+|++|||||||++++++..+.+....+.+.. ..
T Consensus 33 ~lp~I~vvG~~~sGKSSLln~l~g~~~lp~~~~~vT~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~ 112 (360)
T 3t34_A 33 SLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLQKIDDGTREYAEFLHLPRKKFTDFAAVRKEIQDETD 112 (360)
T ss_dssp CCCEEEEECBTTSSHHHHHHHHHTSCCSCCCSSSCCCSCEEEEEEECSSCSCCEEEETTSTTCCBSCHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCCCcHHHHHHHHhCCCcCCCCCCcccCcceEEEEecCCCcccceeeeecCCCcccCCHHHHHHHHHHHHH
Confidence 34599999999999999999999988743332221100 00
Q ss_pred --------------EEEEEcCCCeEEEEEEeCCChhHH-------------HhhhccccccccccEEEEEEECCChhhHH
Q 014101 324 --------------VNVVDQPGGTKKTVVLREIPEEAV-------------AKLLSNKDSLAACDIAVFVHDSSDESSWK 376 (430)
Q Consensus 324 --------------~~~v~~~~~~~~~~i~d~~G~e~~-------------~~~~~~~~~~~~ad~vilv~D~t~~~S~~ 376 (430)
...+..+ ....+.+|||+|...+ ..+. ..+++++|++|+|+|.++.+...
T Consensus 113 ~~~g~~~~~s~~~i~l~i~~~-~~~~l~lvDtPG~~~~~~~~q~~~~~~~~~~~~--~~~i~~~d~iilvv~~~~~~~~~ 189 (360)
T 3t34_A 113 RETGRSKAISSVPIHLSIYSP-NVVNLTLIDLPGLTKVAVDGQSDSIVKDIENMV--RSYIEKPNCIILAISPANQDLAT 189 (360)
T ss_dssp HTSCTTCCCCCSCEEEEEEET-TSCSEEEEECCCBCSSCCTTCCSSHHHHHHHHH--HHHHHSSSEEEEEEEETTSCGGG
T ss_pred HhcCCCCCcccceEEEEEeCC-CCCCeEEEECCCCCcCCcCCCchhHHHHHHHHH--HHHhhcCCeEEEEeecccCCcCC
Confidence 0001111 1234679999997554 3344 67889999999999876543322
Q ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc-CcHHHHHHHHHHhCCccc
Q 014101 377 RATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA-MAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 377 ~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~-v~~~~~~~~~~~~g~~~f 429 (430)
..|+..+..... .+.|+++|+||+|+.+.. ...+.++.++..++.+|+
T Consensus 190 --~~~~~l~~~~~~---~~~~~i~V~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~ 238 (360)
T 3t34_A 190 --SDAIKISREVDP---SGDRTFGVLTKIDLMDKGTDAVEILEGRSFKLKYPWV 238 (360)
T ss_dssp --CHHHHHHHHSCT---TCTTEEEEEECGGGCCTTCCSHHHHTTSSSCCSSCCE
T ss_pred --HHHHHHHHHhcc---cCCCEEEEEeCCccCCCcccHHHHHcCccccccCCeE
Confidence 233333333322 167999999999998653 334445444445555543
No 279
>3avx_A Elongation factor TS, elongation factor TU, linke replicase; RNA polymerase, translation, transferase-RNA complex; HET: GH3; 2.41A {Escherichia coli O157} PDB: 3agq_A 3agp_A* 3avu_A 3avv_A 3avt_A* 3avw_A* 3avy_A* 3mmp_A* 3mmp_G* 1efu_B
Probab=99.28 E-value=5.9e-12 Score=137.49 Aligned_cols=135 Identities=13% Similarity=0.056 Sum_probs=89.6
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCC-------CCC-------CcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHH
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRP-------FSD-------NYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVA 348 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~-------~~~-------~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~ 348 (430)
.+.++|+++|.+++|||||+++|++.. +.. ....+.|.++....+.+......+.+|||+|++.|.
T Consensus 294 k~~lnIvIIGhvDvGKSTLInrLt~~~~~~G~a~f~~~a~lD~~~~ErerGITIdva~v~f~~~~~kI~IIDTPGHedF~ 373 (1289)
T 3avx_A 294 KPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYV 373 (1289)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHHHHHHHHHSCC---------------------CCSCEEEECSSCEEEEEECCCHHHHH
T ss_pred CCeeEEEEEcCCCCCHHHHHHHHHhhhccccccccccccccccccccccCceeEEEEEEEEcCCCEEEEEEECCChHHHH
Confidence 566899999999999999999998631 100 001223333322223333345678899999999998
Q ss_pred hhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCc-EEEEEeCCCCCCcc----CcHHHHHHHHHH
Q 014101 349 KLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVP-CLIVAAKDDLDSFA----MAIQDSTRVFTF 423 (430)
Q Consensus 349 ~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~P-iilVgnK~Dl~~~~----v~~~~~~~~~~~ 423 (430)
... ...++.+|++|+|+|+++.... +..+++..+... ++| +|+|+||+|+.+.+ ...+++.++++.
T Consensus 374 ~~m--i~gas~AD~aILVVDAtdGv~~-QTrEhL~ll~~l------gIP~IIVVINKiDLv~d~e~le~i~eEi~elLk~ 444 (1289)
T 3avx_A 374 KNM--ITGAAQMDGAILVVAATDGPMP-QTREHILLGRQV------GVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQ 444 (1289)
T ss_dssp HHH--HHTSCCCSEEEEEEETTTCSCT-THHHHHHHHHHH------TCSCEEEEEECCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHH--HHHHhhCCEEEEEEcCCccCcH-HHHHHHHHHHHc------CCCeEEEEEeecccccchhhHHHHHHHHHHHHHh
Confidence 766 6788999999999999985332 334455444433 578 78999999998632 123567788887
Q ss_pred hCC
Q 014101 424 LVM 426 (430)
Q Consensus 424 ~g~ 426 (430)
+|+
T Consensus 445 ~G~ 447 (1289)
T 3avx_A 445 YDF 447 (1289)
T ss_dssp TTS
T ss_pred ccc
Confidence 763
No 280
>2h5e_A Peptide chain release factor RF-3; beta barrel, translation; HET: GDP; 2.80A {Escherichia coli} PDB: 2o0f_A 3sfs_W* 3zvo_Y* 3uoq_W*
Probab=99.28 E-value=8.5e-12 Score=128.62 Aligned_cols=131 Identities=15% Similarity=0.046 Sum_probs=84.5
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCC---------------c-----CCCccceE--EEEEEEcCCCeEEEEEEeC
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDN---------------Y-----TPTTDERY--AVNVVDQPGGTKKTVVLRE 341 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~---------------~-----~~t~~~~~--~~~~v~~~~~~~~~~i~d~ 341 (430)
...+|+++|.+|+|||||+++|+...-... . .++.+.+. ....+.. ....+.+|||
T Consensus 12 ~~~~I~IiG~~~aGKTTL~~~Ll~~~g~i~~~g~v~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~--~~~~i~liDT 89 (529)
T 2h5e_A 12 KRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPY--HDCLVNLLDT 89 (529)
T ss_dssp TEEEEEEEECTTSSHHHHHHHHHHSCC-------------------------------CCTTEEEEEE--TTEEEEEECC
T ss_pred CCCEEEEECCCCChHHHHHHHHHhhcCCccccceeecCccccceeeccchhcccCCcceeeeEEEEEE--CCeEEEEEEC
Confidence 457999999999999999999985311100 0 01111111 1122333 3467889999
Q ss_pred CChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHH
Q 014101 342 IPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVF 421 (430)
Q Consensus 342 ~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~ 421 (430)
+|++.|.... ..+++.+|++|+|+|+++..... ...++..+.. .++|+++|+||+|+.... ..+...++.
T Consensus 90 PG~~df~~~~--~~~l~~aD~~IlVvDa~~g~~~~-t~~~~~~~~~------~~ipiivviNK~Dl~~~~-~~~~~~~i~ 159 (529)
T 2h5e_A 90 PGHEDFSEDT--YRTLTAVDCCLMVIDAAKGVEDR-TRKLMEVTRL------RDTPILTFMNKLDRDIRD-PMELLDEVE 159 (529)
T ss_dssp CCSTTCCHHH--HHGGGGCSEEEEEEETTTCSCHH-HHHHHHHHTT------TTCCEEEEEECTTSCCSC-HHHHHHHHH
T ss_pred CCChhHHHHH--HHHHHHCCEEEEEEeCCccchHH-HHHHHHHHHH------cCCCEEEEEcCcCCcccc-HHHHHHHHH
Confidence 9998887665 57889999999999998753322 2333333322 168999999999998743 234456666
Q ss_pred HHhCC
Q 014101 422 TFLVM 426 (430)
Q Consensus 422 ~~~g~ 426 (430)
+.++.
T Consensus 160 ~~l~~ 164 (529)
T 2h5e_A 160 NELKI 164 (529)
T ss_dssp HHHCC
T ss_pred HHhCC
Confidence 66664
No 281
>1wxq_A GTP-binding protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii} SCOP: c.37.1.8 d.15.10.2
Probab=99.27 E-value=1.7e-11 Score=121.90 Aligned_cols=87 Identities=16% Similarity=0.077 Sum_probs=48.1
Q ss_pred eEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCcc--ceEEEEEEE-------------------cCC-CeEEEEEEeCCC
Q 014101 286 FQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTD--ERYAVNVVD-------------------QPG-GTKKTVVLREIP 343 (430)
Q Consensus 286 ~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~--~~~~~~~v~-------------------~~~-~~~~~~i~d~~G 343 (430)
+||+++|.+|||||||+|++++........|..+ .......+. +.+ ....+.+||++|
T Consensus 1 ~kI~ivG~pnvGKSTL~n~L~~~~~~~~~~p~tT~~~~~g~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~i~lvDtpG 80 (397)
T 1wxq_A 1 MEIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQNYEYRNGLALIPVKMVDVAG 80 (397)
T ss_dssp CEEEEEECTTSSHHHHHHHHHC--------------CCEEEEEEEEECSCSSSCCSCCCSSSCEETTEEEEEEEEEECC-
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCcccCCCCcccCCceEEEeeccCCchHHhhhhcccccccccCCcceEEEEEEECCC
Confidence 5899999999999999999999873322223222 222221111 121 135688999999
Q ss_pred hhH----HHhhh-ccccccccccEEEEEEECCCh
Q 014101 344 EEA----VAKLL-SNKDSLAACDIAVFVHDSSDE 372 (430)
Q Consensus 344 ~e~----~~~~~-~~~~~~~~ad~vilv~D~t~~ 372 (430)
... ...+. ....+++.+|++++|+|+++.
T Consensus 81 ~~~~a~~~~~l~~~~l~~i~~aD~il~VvD~~~~ 114 (397)
T 1wxq_A 81 LVPGAHEGRGLGNKFLDDLRMASALIHVVDATGK 114 (397)
T ss_dssp --------------CCCSSTTCSEEEEEEETTCC
T ss_pred cccchhhhhhHHHHHHHHHhcCCEEEEEEecccc
Confidence 743 22222 112567999999999999875
No 282
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.27 E-value=3.4e-12 Score=123.83 Aligned_cols=130 Identities=17% Similarity=0.199 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHH-HHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHc
Q 014101 54 RCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVG-VKRVVQEKLREGVNERG-LTLAGFLFLHALFIEK 131 (430)
Q Consensus 54 ~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~-i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~ 131 (430)
.....++.+|..||+|+||+|+.+||..++ +|.+++..++.. ++..+ |.+++| |+|+||+.++....
T Consensus 185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l---~g~~~~~~ei~~~l~~~~------D~d~dG~Is~~EF~~~l~~~~-- 253 (323)
T 1ij5_A 185 NDLAALVADFRKIDTNSNGTLSRKEFREHF---VRLGFDKKSVQDALFRYA------DEDESDDVGFSEYVHLGLCLL-- 253 (323)
T ss_dssp HHHHTSCCCHHHHCTTCCSEECHHHHHHHH---HHTTCCCHHHHHHHHHHH------CTTCSSCEEHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH---cCCCCCHHHHHHHHHHHh------cCCCCCEEeHHHHHHHHHHHH--
Confidence 456778999999999999999999999987 578889999999 99998 677888 99999999876544
Q ss_pred CCchhHHHHHHhhcCCCCcccccccC-CCCcc-cCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 132 GRLETTWTVLRKFGYNNDIKLADELI-PYSAF-KRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 132 ~~~~~~w~~l~~~~y~~~l~~~~~~~-~~~~~-~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
.+..+|+.|+.|+++.|+.+.+ . .+ .... ..+++ +.+..+|+.+|.|+||.|+.+||..++..
T Consensus 254 ----~l~~~F~~~D~d~dG~Is~~El~~--~l~~~~g---~~ls~---~e~~~l~~~~D~d~dG~Is~~EF~~~~~~ 318 (323)
T 1ij5_A 254 ----VLRILYAFADFDKSGQLSKEEVQK--VLEDAHI---PESAR---KKFEHQFSVVDVDDSKSLSYQEFVMLVLL 318 (323)
T ss_dssp ----HHHHHHHHTCSSSCSSEEHHHHHH--HHHHTTC---CGGGC---STHHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred ----HHHHHHHHhCCCCCCCccHHHHHH--HHHHHcC---CCCCH---HHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 5678899999999999987765 3 12 1111 11222 22678999999999999999999998754
No 283
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=99.26 E-value=1.2e-11 Score=98.58 Aligned_cols=70 Identities=17% Similarity=0.158 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHhhc-CCCC-CccCHHHHHHHHHHh----cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 53 PRCVRALKRIFILCD-HDRD-GALSDAELNDFQVKC----FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~d-G~is~~El~~~~~~~----~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
+..+..|+++|+.|| +||| |+||.+||+.+++.. +|.++++++++.+++.+ |.|++| |+|+||+.++
T Consensus 6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~------D~dgDG~Idf~EF~~~~ 79 (101)
T 3nso_A 6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVL------DTNKDCEVDFVEYVRSL 79 (101)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHH------HHCCCSCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHh------CCCCCCCCcHHHHHHHH
Confidence 456889999999998 9998 999999999998863 36788999999999999 678899 9999999987
Q ss_pred HHH
Q 014101 126 ALF 128 (430)
Q Consensus 126 ~~~ 128 (430)
...
T Consensus 80 ~~~ 82 (101)
T 3nso_A 80 ACL 82 (101)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 284
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.26 E-value=2.5e-11 Score=110.09 Aligned_cols=133 Identities=11% Similarity=0.126 Sum_probs=96.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHH
Q 014101 52 KPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIE 130 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~ 130 (430)
.+.....++++|+.+|.|+||.|+.+|+..++... +.....+++..+++.+ |.+++| |+++||..++.....
T Consensus 52 ~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~-~~~~~~~~l~~~F~~~------D~d~~G~I~~~E~~~~l~~~~~ 124 (211)
T 2ggz_A 52 NQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLI-MQEKMEQKLKWYFKLY------DADGNGSIDKNELLDMFMAVQA 124 (211)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH-SCSSHHHHHHHHHHHH------CTTCSSSBCHHHHHHHHHHHTT
T ss_pred CcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHh-ccCchHHHHHHHHHHh------cCCCCCcCcHHHHHHHHHHHHh
Confidence 34455678999999999999999999999987764 5566788888999888 788899 999999988642110
Q ss_pred cCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCC
Q 014101 131 KGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPEC 210 (430)
Q Consensus 131 ~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~ 210 (430)
.... ..++ ..+.+..+|+.+|.|+||.|+.+||..++...+..
T Consensus 125 ---------------------------------~~~~--~~~~--~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~ 167 (211)
T 2ggz_A 125 ---------------------------------LNGQ--QTLS--PEEFINLVFHKIDINNDGELTLEEFINGMAKDQDL 167 (211)
T ss_dssp ---------------------------------SSCC--CSCT--HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTTTT
T ss_pred ---------------------------------hcCC--cccc--HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCHHH
Confidence 0000 0011 12347889999999999999999999999753221
Q ss_pred CCCCCcccccccccCCcccchhhHHhhhh
Q 014101 211 PWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 211 ~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
..++. ..++|++|+..+.
T Consensus 168 ----~~~~~-------~~~d~~~f~~~~~ 185 (211)
T 2ggz_A 168 ----LEIVY-------KSFDFSNVLRVIC 185 (211)
T ss_dssp ----HHHHH-------HHSCTTHHHHHHH
T ss_pred ----HHHHh-------ccCCHHHHHHHHh
Confidence 22332 1355888888755
No 285
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.26 E-value=4.3e-12 Score=114.42 Aligned_cols=126 Identities=17% Similarity=0.162 Sum_probs=95.9
Q ss_pred hhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHh
Q 014101 65 LCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVLRK 143 (430)
Q Consensus 65 ~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~ 143 (430)
.++.|++|.|+.+||..+++. +| ++.+++..+++.++.+ +++| |+++||..++...
T Consensus 7 ~mg~~~~g~l~~~el~~~~~~-~~--~~~~~i~~~f~~~d~~-----~~~G~i~~~ef~~~l~~~--------------- 63 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQLN-TK--FSEEELCSWYQSFLKD-----CPTGRITQQQFQSIYAKF--------------- 63 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHHH-SS--CCHHHHHHHHHHHHHH-----CTTSEEEHHHHHHHHHHT---------------
T ss_pred hhccccCCCCCHHHHHHHHHH-cC--CCHHHHHHHHHHHHhh-----CCCCCCCHHHHHHHHHHh---------------
Confidence 378999999999999998765 45 6899999999999533 1578 9999999886421
Q ss_pred hcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccc
Q 014101 144 FGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAA 221 (430)
Q Consensus 144 ~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~ 221 (430)
+ + . . ...+.+..+|+.||.|++|.|+.+||..++....... .....+.+.+
T Consensus 64 -~------------~------~-----~---~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~ 116 (207)
T 2d8n_A 64 -F------------P------D-----T---DPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLY 116 (207)
T ss_dssp -C------------T------T-----S---CCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHH
T ss_pred -c------------c------C-----C---CcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 1 0 0 0 0124578999999999999999999999987542211 2223466789
Q ss_pred cccCCcccchhhHHhhhhh
Q 014101 222 EKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 222 d~~~dg~i~~~ef~~~w~~ 240 (430)
|.|++|.|+++||...+..
T Consensus 117 D~d~~G~I~~~E~~~~l~~ 135 (207)
T 2d8n_A 117 DVDGNGTISKNEVLEIVMA 135 (207)
T ss_dssp CTTCSSEECHHHHHHHHHH
T ss_pred cCCCCCeEcHHHHHHHHHH
Confidence 9999999999999987654
No 286
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=99.26 E-value=3.1e-12 Score=109.54 Aligned_cols=70 Identities=20% Similarity=0.308 Sum_probs=63.0
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
-.+| ++++..++++|+.||+|+||.|+.+||..++.. +|..++++++..++..+ |.+++| |+|+||+.++
T Consensus 40 ~~~l-~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~-~g~~~~~~~~~~l~~~~------D~d~dg~I~~~eF~~~~ 110 (147)
T 1wy9_A 40 DEDL-PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKRLIREV------SSGSEETFSYSDFLRMM 110 (147)
T ss_dssp CTTH-HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHH-TTCCCCHHHHHHHHHHH------CSSCTTEECHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CCCCCCcEeHHHHHHHH
Confidence 3456 788999999999999999999999999999876 58889999999999998 678889 9999999885
No 287
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.26 E-value=9.3e-12 Score=108.31 Aligned_cols=60 Identities=20% Similarity=0.388 Sum_probs=31.4
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
..++++|+.||+|+||.|+.+||..++.. .|.+++++++..+++.+ +++| |+|+||+.++
T Consensus 72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~--------d~dg~i~~~eF~~~~ 132 (167)
T 1gjy_A 72 NGWRQHFISFDSDRSGTVDPQELQKALTT-MGFRLNPQTVNSIAKRY--------STSGKITFDDYIACC 132 (167)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHT-TTCCCCHHHHHHHHHHT--------CBTTBEEHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHh--------CcCCcCcHHHHHHHH
Confidence 34455555555555555555555555443 34555555555555543 2334 5555555543
No 288
>1zo1_I IF2, translation initiation factor 2; E. coli, ribosome, initiation of protein synthesis, cryo-eletron microscopy, translation/RNA complex; 13.80A {Escherichia coli}
Probab=99.25 E-value=1.3e-12 Score=133.09 Aligned_cols=112 Identities=16% Similarity=0.170 Sum_probs=81.4
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEE
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIA 363 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~v 363 (430)
...+|+++|.+++|||||++++.+..+.....++++.+.....+.+++ ..+.+|||+|++.|..+. ...+..+|++
T Consensus 3 R~~~V~IvGhvd~GKTTLl~~L~~~~v~~~e~~GIT~~i~~~~v~~~~--~~i~~iDTPGhe~f~~~~--~~~~~~aD~a 78 (501)
T 1zo1_I 3 RAPVVTIMGHVDHGKTSLLEYIRSTKVASGEAGGITQHIGAYHVETEN--GMITFLDTPGHAAFTSMR--ARGAQATDIV 78 (501)
T ss_dssp CCCCEEEEESTTSSSHHHHHHHHHHHHSBTTBCCCCCCSSCCCCCTTS--SCCCEECCCTTTCCTTSB--CSSSBSCSSE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHcCCCccccCCCeeEeEEEEEEEECC--EEEEEEECCCcHHHHHHH--HHHHhhCCEE
Confidence 346899999999999999999987655444333333333333344443 356799999999998877 6778999999
Q ss_pred EEEEECCC---hhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC
Q 014101 364 VFVHDSSD---ESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDS 409 (430)
Q Consensus 364 ilv~D~t~---~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~ 409 (430)
++|+|+++ +++.+.+ ..+... ++|+++++||+|+.+
T Consensus 79 ILVVda~~g~~~qT~e~l----~~~~~~------~vPiIVviNKiDl~~ 117 (501)
T 1zo1_I 79 VLVVAADDGVMPQTIEAI----QHAKAA------QVPVVVAVNKIDKPE 117 (501)
T ss_dssp EEEEETTTBSCTTTHHHH----HHHHHT------TCCEEEEEECSSSST
T ss_pred EEEeecccCccHHHHHHH----HHHHhc------CceEEEEEEeccccc
Confidence 99999987 3444333 222222 689999999999975
No 289
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=99.25 E-value=9e-12 Score=129.10 Aligned_cols=120 Identities=17% Similarity=0.139 Sum_probs=81.4
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCC---CCcCCCccceEEEEE---------------------------------
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFS---DNYTPTTDERYAVNV--------------------------------- 326 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~---~~~~~t~~~~~~~~~--------------------------------- 326 (430)
...++|+|+|.+|||||||+|++++..+. ....|++.....+..
T Consensus 63 ~~~~~V~vvG~~n~GKSTLIN~Llg~~~~~~~vs~~p~T~~~~~i~~~~~~~i~~g~~l~~~~~~~~~~L~~~g~~~~~~ 142 (550)
T 2qpt_A 63 DGKPMVLVAGQYSTGKTSFIQYLLEQEVPGSRVGPEPTTDCFVAVMHGETEGTVPGNALVVDPEKPFRKLNPFGNTFLNR 142 (550)
T ss_dssp SSCCEEEEEEBTTSCHHHHHHHHHTSCCSSCCCCSSCCCCSEEEEECCSSSEEECCC------------------CCCTT
T ss_pred cCCcEEEEECCCCCCHHHHHHHHhCCccccCccCCCCccceEEEEEECCcccccCCceeeecCcccHHHHhhhccccccc
Confidence 34579999999999999999999999874 233333321111000
Q ss_pred ---EEcCCC-eEEEEEEeCCChhH-----------HHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCC
Q 014101 327 ---VDQPGG-TKKTVVLREIPEEA-----------VAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGED 391 (430)
Q Consensus 327 ---v~~~~~-~~~~~i~d~~G~e~-----------~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~ 391 (430)
+.+++. ...+.+|||+|... +.... ..++..+|++++|+|+++.........|+..+...
T Consensus 143 ~~~~~~~~~ll~~l~lIDTPG~~~~~~~~~~~~~~f~~~~--~~~l~~aD~il~VvDa~~~~~~~~~~~~l~~l~~~--- 217 (550)
T 2qpt_A 143 FMCAQLPNQVLESISIIDTPGILSGAKQRVSRGYDFPAVL--RWFAERVDLIILLFDAHKLEISDEFSEAIGALRGH--- 217 (550)
T ss_dssp EEEEECCCHHHHHCEEEECCCBCC-------CCSCHHHHH--HHHHHHCSEEEEEEETTSCCCCHHHHHHHHHTTTC---
T ss_pred ceEEeccccccCCEEEEECcCCCCcchhHHHHHhhHHHHH--HHHHHhCCEEEEEEeCCcCCCCHHHHHHHHHHHhc---
Confidence 000000 02467999999753 33443 45678999999999998865666666777666432
Q ss_pred CCCCCcEEEEEeCCCCCCc
Q 014101 392 TGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 392 ~~~~~PiilVgnK~Dl~~~ 410 (430)
+.|+++|+||+|+...
T Consensus 218 ---~~pvilVlNK~Dl~~~ 233 (550)
T 2qpt_A 218 ---EDKIRVVLNKADMVET 233 (550)
T ss_dssp ---GGGEEEEEECGGGSCH
T ss_pred ---CCCEEEEEECCCccCH
Confidence 5799999999999864
No 290
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=99.25 E-value=2.3e-11 Score=121.52 Aligned_cols=140 Identities=14% Similarity=0.118 Sum_probs=82.5
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCc--------CCCccceEEEEEEEcCCCeEEEEEEeCCChhHHH------
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNY--------TPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVA------ 348 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~--------~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~------ 348 (430)
.-.++|+|+|++|||||||++++++..+.... .++.+.......+...+....+.+||++|.....
T Consensus 29 ~vsf~I~lvG~sGaGKSTLln~L~g~~~~~~~~~~~~~~~~~t~~~~~i~~v~q~~~~~~~Ltv~Dt~g~~~~~~~~~~~ 108 (418)
T 2qag_C 29 GFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCW 108 (418)
T ss_dssp CCCEEEEEECCTTSSHHHHHHHHTTCCCCCCCCCSCC-----CCEEEEEECC------CEEEEEEECC-----------C
T ss_pred CCCEEEEEECCCCCcHHHHHHHHhCCCCCCCCCCCcccCCccceeeeeEEEEEecCCcccceeeeechhhhhhccchhhH
Confidence 34578999999999999999999988763221 1222211111112223333467899999875431
Q ss_pred -hhh----------------ccccccccccEEEEEEECCCh-hhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCCC
Q 014101 349 -KLL----------------SNKDSLAACDIAVFVHDSSDE-SSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLDS 409 (430)
Q Consensus 349 -~~~----------------~~~~~~~~ad~vilv~D~t~~-~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~ 409 (430)
.+. -...++.++++.+++|..+.. .++.... .|+..+.. ++|+|+|+||+|+..
T Consensus 109 ~~i~~~i~~~~~~~l~qr~~IaRal~~d~~~~vlL~ldePt~~~L~~~d~~~lk~L~~-------~v~iIlVinK~Dll~ 181 (418)
T 2qag_C 109 QPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHE-------KVNIIPLIAKADTLT 181 (418)
T ss_dssp HHHHHHHHHHHHHHTTTSCC-CCCCCCCC-CCEEEEECCC-CCSCCHHHHHHHHHHTT-------TSEEEEEEESTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEEecCcccCCCHHHHHHHHHHhc-------cCcEEEEEEcccCcc
Confidence 110 013456666666666665543 4555544 57666631 589999999999976
Q ss_pred cc-CcH--HHHHHHHHHhCCccc
Q 014101 410 FA-MAI--QDSTRVFTFLVMVLY 429 (430)
Q Consensus 410 ~~-v~~--~~~~~~~~~~g~~~f 429 (430)
.+ +.. ..+.+++..+|+++|
T Consensus 182 ~~ev~~~k~~i~~~~~~~~i~~~ 204 (418)
T 2qag_C 182 PEECQQFKKQIMKEIQEHKIKIY 204 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCeEE
Confidence 43 332 678888899998876
No 291
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=99.25 E-value=1.6e-12 Score=109.59 Aligned_cols=98 Identities=10% Similarity=-0.041 Sum_probs=57.5
Q ss_pred HHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCH
Q 014101 96 IVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTN 174 (430)
Q Consensus 96 ~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~ 174 (430)
+..+++.+ |.+++| |+|+||+.++...+ ...
T Consensus 5 ~~~l~~~~------D~d~~G~I~~~EF~~~~~~~~------------------------------------------~~~ 36 (135)
T 3h4s_E 5 EKSMLLET------TSTTKMETKYEDMLPVMAEKM------------------------------------------DVE 36 (135)
T ss_dssp --------------------CCCC-----------------------------------------------------CHH
T ss_pred HHHHHHHH------cCCCCCcEeHHHHHHHHHHHc------------------------------------------ccc
Confidence 34566666 677888 99999998864211 002
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCC-CC--CCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 175 EAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPE-CP--WDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 175 ~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~-~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
...+.++.+|+.||+||+|+|+.+||+.++...+. .. .....+++.+|.|+||.|+|+||+..+.-.
T Consensus 37 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 37 EFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence 23456899999999999999999999999987652 22 223457789999999999999999987643
No 292
>1g7s_A Translation initiation factor IF2/EIF5B; translational GTPase; HET: GDP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: b.43.3.1 b.43.3.1 c.20.1.1 c.37.1.8 PDB: 1g7r_A* 1g7t_A*
Probab=99.24 E-value=6e-12 Score=131.23 Aligned_cols=109 Identities=19% Similarity=0.199 Sum_probs=78.6
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCc----CCCccceEEEEEEEcC----------C------CeEEEEEEeCCCh
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNY----TPTTDERYAVNVVDQP----------G------GTKKTVVLREIPE 344 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~----~~t~~~~~~~~~v~~~----------~------~~~~~~i~d~~G~ 344 (430)
.++|+++|.+++|||||++++++..+.... .++++..+ +... + ....+.+|||+|+
T Consensus 5 ~~~V~IvGh~d~GKTTLl~~L~~~~v~~~e~ggiT~~ig~~~----~~~~~~~~~~~~~~~~~~v~~~~~~i~liDTPGh 80 (594)
T 1g7s_A 5 SPIVSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATE----IPMDVIEGICGDFLKKFSIRETLPGLFFIDTPGH 80 (594)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHHSCC----CCCBTTEEE----EEHHHHHHHSCGGGGGCGGGGTCCEEEEECCCTT
T ss_pred CcEEEEECCCCCcHHHHHHHHhcccCccccCCceecccCeEE----EeechhhhhccccccccccccccCCEEEEECCCc
Confidence 469999999999999999999876543322 12222222 2211 0 1124789999999
Q ss_pred hHHHhhhccccccccccEEEEEEECCC---hhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC
Q 014101 345 EAVAKLLSNKDSLAACDIAVFVHDSSD---ESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDS 409 (430)
Q Consensus 345 e~~~~~~~~~~~~~~ad~vilv~D~t~---~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~ 409 (430)
+.|..+. ...++.+|++|+|+|+++ +++++.+.. +... ++|+++|+||+|+..
T Consensus 81 e~F~~~~--~r~~~~aD~aILVvDa~~Gv~~qT~e~l~~----l~~~------~vPiIVViNKiDl~~ 136 (594)
T 1g7s_A 81 EAFTTLR--KRGGALADLAILIVDINEGFKPQTQEALNI----LRMY------RTPFVVAANKIDRIH 136 (594)
T ss_dssp SCCTTSB--CSSSBSCSEEEEEEETTTCCCHHHHHHHHH----HHHT------TCCEEEEEECGGGST
T ss_pred HHHHHHH--HHHHhhCCEEEEEEECCCCccHhHHHHHHH----HHHc------CCeEEEEeccccccc
Confidence 9998877 677899999999999998 677765542 2222 689999999999965
No 293
>2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A*
Probab=99.24 E-value=2.3e-11 Score=129.56 Aligned_cols=121 Identities=19% Similarity=0.232 Sum_probs=82.0
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCCCCc-CCCccc--------eEEEEEEEcCCC--------------------
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNY-TPTTDE--------RYAVNVVDQPGG-------------------- 332 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~-~~t~~~--------~~~~~~v~~~~~-------------------- 332 (430)
.+..++|+|+|.+|+|||||+|+|++..+.+.. .|++.. .........++.
T Consensus 66 ~~~~~~V~VvG~~naGKSSLlNaLlg~~~~~v~~~p~T~~~~~i~~g~~~~~t~~~~~g~~~~~~~~~~i~~~~~i~~~~ 145 (695)
T 2j69_A 66 QQGVFRLLVLGDMKRGKSTFLNALIGENLLPSDVNPCTAVLTVLRYGPEKKVTIHFNDGKSPQQLDFQNFKYKYTIDPAE 145 (695)
T ss_dssp HHCCEEEEEECCTTSCHHHHHHHHHTSSCSCCCCCTTTCCCEEEEECSSCEEEEEESSSCCCCEEEHHHHHHHSCCCHHH
T ss_pred ccCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCCCCccceEEEEeCCCCeEEEEEcCCCcccccChhhhhhhhcCCHHH
Confidence 345689999999999999999999998865533 233310 000011110100
Q ss_pred -------------------------e--EEEEEEeCCChhHHH---hhhccccccccccEEEEEEECCChhhHHHHHHHH
Q 014101 333 -------------------------T--KKTVVLREIPEEAVA---KLLSNKDSLAACDIAVFVHDSSDESSWKRATELL 382 (430)
Q Consensus 333 -------------------------~--~~~~i~d~~G~e~~~---~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l 382 (430)
. ..+.+|||+|..... ... ..+++.+|++++|+|++++.+......|.
T Consensus 146 ~~~l~~~~~~~~~~v~~i~i~~p~~~l~~~l~LiDTPGl~~~~~~~~~~--~~~i~~aD~vL~Vvda~~~~s~~e~~~l~ 223 (695)
T 2j69_A 146 AKKLEQEKKQAFPDVDYAVVEYPLTLLQKGIEIVDSPGLNDTEARNELS--LGYVNNCHAILFVMRASQPCTLGERRYLE 223 (695)
T ss_dssp HHHHHTSSCCSCTTEEEEEEEECCHHHHTTEEEEECCCHHHHHTCHHHH--THHHHSSSEEEEEEETTSTTCHHHHHHHH
T ss_pred HHHHhhccccccccceEEEEEccchhccCCeEEEECCCCCchhhHHHHH--HHHHHhCCEEEEEEeCCCccchhHHHHHH
Confidence 0 246789999975532 223 57789999999999999888877766564
Q ss_pred HHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 383 VEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 383 ~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
..+... +.|+++|+||+|+...
T Consensus 224 ~~l~~~------~~~iiiVlNK~Dl~~~ 245 (695)
T 2j69_A 224 NYIKGR------GLTVFFLVNAWDQVRE 245 (695)
T ss_dssp HHTTTS------CCCEEEEEECGGGGGG
T ss_pred HHHHhh------CCCEEEEEECcccccc
Confidence 444322 5789999999999754
No 294
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=99.24 E-value=2.1e-11 Score=93.62 Aligned_cols=73 Identities=19% Similarity=0.259 Sum_probs=66.2
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...|++++...++++|..||+|+||.|+.+||..++.. +|.+++.+++..++..+ |.+++| |+|+||+.++.
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~------d~~~~g~i~~~eF~~~~~ 77 (85)
T 2ktg_A 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRA-LGANPTKQKISEIVKDY------DKDNSGKFDQETFLTIML 77 (85)
T ss_dssp CCSSSHHHHHHHHHHHHHTCTTCCSEEEHHHHHHHHHT-TSSCCCHHHHHHHHHHH------SSSSCSEEEHHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CCCCCCcCcHHHHHHHHH
Confidence 35689999999999999999999999999999999765 58899999999999998 678889 99999999876
Q ss_pred H
Q 014101 127 L 127 (430)
Q Consensus 127 ~ 127 (430)
.
T Consensus 78 ~ 78 (85)
T 2ktg_A 78 E 78 (85)
T ss_dssp H
T ss_pred H
Confidence 4
No 295
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.23 E-value=6.3e-12 Score=111.75 Aligned_cols=155 Identities=18% Similarity=0.220 Sum_probs=109.2
Q ss_pred CCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCc-hhHHHHHHhhcC
Q 014101 69 DRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRL-ETTWTVLRKFGY 146 (430)
Q Consensus 69 d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~-~~~w~~l~~~~y 146 (430)
++.+.|+.++|+.+... ..++.+++..+++.++.+ +++| |+++||..++......... +.+..+++.++.
T Consensus 3 ~~~s~l~~~~l~~l~~~---~~~~~~~i~~~f~~fd~~-----~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~ 74 (193)
T 1bjf_A 3 KQNSKLRPEVMQDLLES---TDFTEHEIQEWYKGFLRD-----CPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDA 74 (193)
T ss_dssp --CCCCCHHHHHHHHHH---SSCCHHHHHHHHHHHHHH-----STTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCS
T ss_pred cccccCCHHHHHHHHHH---cCCCHHHHHHHHHHHHHH-----CCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCC
Confidence 45678999999987443 457899999999998532 1678 9999999986543222222 345578999999
Q ss_pred CCCcccccccC-CCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC----CC---CCCC-----
Q 014101 147 NNDIKLADELI-PYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA----PE---CPWD----- 213 (430)
Q Consensus 147 ~~~l~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~----~~---~~~~----- 213 (430)
|+++.|+.+.+ . .+.... .....+.++.+|+.||.|++|.|+.+||..++... +. .+..
T Consensus 75 d~~g~i~~~Ef~~--~~~~~~------~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~ 146 (193)
T 1bjf_A 75 NGDGTIDFREFII--ALSVTS------RGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPE 146 (193)
T ss_dssp SCSSEEEHHHHHH--HHHHHT------SSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHH
T ss_pred CCCCcCcHHHHHH--HHHHHc------CCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHH
Confidence 99999986554 2 111000 01123568899999999999999999999988641 21 1111
Q ss_pred --CCcccccccccCCcccchhhHHhhhh
Q 014101 214 --EAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 214 --~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
...+++.+|.|+||.|+++||+..+.
T Consensus 147 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 174 (193)
T 1bjf_A 147 KRTEKIFRQMDTNRDGKLSLEEFIRGAK 174 (193)
T ss_dssp HHHHHHHHHSCTTCSSEECHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 22456789999999999999998763
No 296
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=99.23 E-value=2.6e-11 Score=91.18 Aligned_cols=71 Identities=18% Similarity=0.217 Sum_probs=64.3
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHH
Q 014101 51 LKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALF 128 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~ 128 (430)
|++++.+.++++|+.||+|+||.|+.+||..++..+ |.+++.+++..++..+ |.+++| |+|+||+.++...
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~------d~~~~g~i~~~eF~~~~~~~ 72 (77)
T 2joj_A 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRAL-GFDVKKPEILELMNEY------DREGNGYIGFDDFLDIMTEK 72 (77)
T ss_dssp CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHH-TCCCHHHHHHHHHHHH------CCSSSSEEEHHHHHHHHTHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh-CCCCCHHHHHHHHHHH------CCCCCCcCcHHHHHHHHHHH
Confidence 578899999999999999999999999999998764 8889999999999998 678889 9999999987543
No 297
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=99.23 E-value=4.3e-11 Score=94.99 Aligned_cols=69 Identities=14% Similarity=0.219 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHhhc-CCCCC-ccCHHHHHHHHHHh----cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 53 PRCVRALKRIFILCD-HDRDG-ALSDAELNDFQVKC----FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~is~~El~~~~~~~----~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
+.++..|+++|+.|| +|||| +||.+||+.+++.. +|.++++++++.+++.+ |.|++| |+|+||+.++
T Consensus 7 e~~i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~------D~d~DG~Idf~EF~~~~ 80 (98)
T 3n22_A 7 EQALAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSL------DENSDQQVDFQEYAVFL 80 (98)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHH------CTTSSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHh------CCCCCCCCcHHHHHHHH
Confidence 567899999999998 89995 99999999998763 35678999999999999 788999 9999999987
Q ss_pred HH
Q 014101 126 AL 127 (430)
Q Consensus 126 ~~ 127 (430)
..
T Consensus 81 ~~ 82 (98)
T 3n22_A 81 AL 82 (98)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 298
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.23 E-value=6e-11 Score=105.09 Aligned_cols=113 Identities=17% Similarity=0.214 Sum_probs=84.8
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.++++|+.+|.|+||.|+.+|+..++... +...+.+++..+++.+ |.+++| |+++||..++....
T Consensus 64 ~~~~~f~~~D~d~~G~i~~~ef~~~~~~~-~~~~~~~~~~~~f~~~------D~d~~G~i~~~ef~~~~~~~~------- 129 (190)
T 1fpw_A 64 FANHLFTVFDKDNNGFIHFEEFITVLSTT-SRGTLEEKLSWAFELY------DLNHDGYITFDEMLTIVASVY------- 129 (190)
T ss_dssp HHHHHHHTCCSSCSSEECHHHHHHHHHHH-SCCCSTHHHHHHHHHH------CSSCSSEEEHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHCCCCCCcEeHHHHHHHHHHH-ccCCcHHHHHHHHHHh------cCCCCCcCcHHHHHHHHHHHH-------
Confidence 36789999999999999999999997664 6667888999999998 788899 99999998865321
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP 208 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~ 208 (430)
+.+|....+ + . . .....+.+.++|+.+|.|+||.|+.+||..++...|
T Consensus 130 -----~~~g~~~~~-------~-------~--~---~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 177 (190)
T 1fpw_A 130 -----KMMGSMVTL-------N-------E--D---EATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDP 177 (190)
T ss_dssp -----TTSCSTTSS-------S-------C--C---CCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSST
T ss_pred -----HHhccccCc-------c-------c--c---cchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCh
Confidence 111110000 0 0 0 011234578999999999999999999999997643
No 299
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=99.22 E-value=2.6e-11 Score=95.08 Aligned_cols=70 Identities=19% Similarity=0.234 Sum_probs=62.4
Q ss_pred CccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALF 128 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~ 128 (430)
.++++++..++++|+.||+|+||+|+.+||..+++.. | ++.+++..|++.+ |.+++| |+|+||+.++...
T Consensus 2 ~ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~-g--~~~~~~~~i~~~~------D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKS-K--LPILELSHIWELS------DFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp CCCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHH-S--SCHHHHHHHHHHH------CTTCSSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-C--CCHHHHHHHHHHH------CCCCCCCCCHHHHHHHHHHH
Confidence 4789999999999999999999999999999998765 5 6789999999988 788899 9999999987643
No 300
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=99.22 E-value=4.5e-11 Score=93.93 Aligned_cols=69 Identities=9% Similarity=0.170 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhhc-CCCC-CccCHHHHHHHHHHhcC----CCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 53 PRCVRALKRIFILCD-HDRD-GALSDAELNDFQVKCFN----SPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~d-G~is~~El~~~~~~~~g----~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
+..+..|+++|+.|| +||| |+||.+||+.+++..+| .++++++++.+++.+ |.|++| |+|+||+.++
T Consensus 6 e~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~------D~d~DG~Idf~EF~~~~ 79 (93)
T 4eto_A 6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNL------DSNRDNEVDFQEYCVFL 79 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHH------CTTSSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHH------CCCCCCCCcHHHHHHHH
Confidence 456899999999998 6885 89999999999886443 456899999999999 788999 9999999987
Q ss_pred HH
Q 014101 126 AL 127 (430)
Q Consensus 126 ~~ 127 (430)
..
T Consensus 80 ~~ 81 (93)
T 4eto_A 80 SC 81 (93)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 301
>1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B*
Probab=99.22 E-value=1.9e-11 Score=117.81 Aligned_cols=119 Identities=17% Similarity=0.155 Sum_probs=73.1
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcC------CCccceEEE--------------------------------
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYT------PTTDERYAV-------------------------------- 324 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~------~t~~~~~~~-------------------------------- 324 (430)
....+|+|+|.+|||||||+|++++..+.+... |+.. ....
T Consensus 22 ~~~~~I~vvG~~~~GKSTlln~l~g~~~lp~~~~~~t~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (315)
T 1jwy_B 22 LDLPQIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLIL-QLTHLPIADDGSQTQEWGEFLHKPNDMFYDFSEIRE 100 (315)
T ss_dssp TCCCEEEEEECSSSSHHHHHHHHHTSCCCCC--------CEEE-EEEECCCCTTSCCCCCEEEESSSTTCCBCCTHHHHH
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHHCCCcCCCCCCceeeeeEEE-EEEeCCCcccccchhhhhhhhcccccccCCHHHHHH
Confidence 455799999999999999999999988632211 1000 0000
Q ss_pred --------------------EE--EEcCCCeEEEEEEeCCChhH-------------HHhhhccccccccccEEEEEEEC
Q 014101 325 --------------------NV--VDQPGGTKKTVVLREIPEEA-------------VAKLLSNKDSLAACDIAVFVHDS 369 (430)
Q Consensus 325 --------------------~~--v~~~~~~~~~~i~d~~G~e~-------------~~~~~~~~~~~~~ad~vilv~D~ 369 (430)
.. +..+ ....+.+|||+|... +.... ..+++.+|++++|+|.
T Consensus 101 ~i~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~lvDTpG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~iilvvd~ 177 (315)
T 1jwy_B 101 EIIRDTDRMTGKNKGISAQPINLKIYSP-HVVNLTLVDLPGITKVPVGDQPTDIEQQIRRMV--MAYIKKQNAIIVAVTP 177 (315)
T ss_dssp HHHHHCC--------CCCCCEEEEEEET-TSCSEEEEECCCCC---------CSHHHHHHHH--HHHHHSTTEEEEEEEE
T ss_pred HHHHHHHHhcCCCCCccCccEEEEEecC-CCCCcEEEECCCCccCCCCCCchhHHHHHHHHH--HHHHcCCCeEEEEEEe
Confidence 00 0111 224578999999642 33333 5778999999999997
Q ss_pred CChhhH-HHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc
Q 014101 370 SDESSW-KRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA 411 (430)
Q Consensus 370 t~~~S~-~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~ 411 (430)
++.... .....++..+.. .+.|+++|+||+|+....
T Consensus 178 ~~~~~~~~~~~~i~~~~~~------~~~~~i~v~NK~Dl~~~~ 214 (315)
T 1jwy_B 178 ANTDLANSDALQLAKEVDP------EGKRTIGVITKLDLMDKG 214 (315)
T ss_dssp SSSCSTTCSHHHHHHHHCS------SCSSEEEEEECTTSSCSS
T ss_pred cCcchhhhHHHHHHHHhCC------CCCcEEEEEcCcccCCcc
Confidence 543211 111123333321 168999999999997643
No 302
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.22 E-value=2.4e-11 Score=111.19 Aligned_cols=120 Identities=13% Similarity=0.060 Sum_probs=89.5
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
..++++|+.+|.|+||.|+.+|+..++... +++..+++.+ |.+++| |+.+||..++..
T Consensus 87 ~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~-------~~l~~~F~~~------D~d~~G~I~~~El~~~l~~-------- 145 (220)
T 3sjs_A 87 QTALRMMRIFDTDFNGHISFYEFMAMYKFM-------ELAYNLFVMN------ARARSGTLEPHEILPALQQ-------- 145 (220)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHHHHHHHH------CCSSTTEECHHHHHHHHHH--------
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHH------CCCCCCCCcHHHHHHHHHH--------
Confidence 467888999999999999999998886653 5677777777 778889 999999887542
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCC
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEA 215 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~ 215 (430)
+|+ .++. +.+..+|+.+| ||||.|+.+|+..++...+. ..
T Consensus 146 --------~g~------------------------~~~~---~~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~~----~~ 185 (220)
T 3sjs_A 146 --------LGF------------------------YINQ---RTSLLLHRLFA-RGMAFCDLNCWIAICAFAAQ----TR 185 (220)
T ss_dssp --------HTC------------------------CCCH---HHHHHHHHHHC---CCSEEHHHHHHHHHHHHH----HH
T ss_pred --------hCC------------------------CCCH---HHHHHHHHHhc-CCCCcCcHHHHHHHHHHHHH----HH
Confidence 221 1112 24678999999 99999999999998876431 13
Q ss_pred cccccc-cccCCc------ccchhhHHhh
Q 014101 216 PYKDAA-EKTALG------GLSLDGFLSE 237 (430)
Q Consensus 216 ~~~~~~-d~~~dg------~i~~~ef~~~ 237 (430)
...+.. |++++| .|+++||+..
T Consensus 186 ~~F~~~~D~~~~G~i~~~~~i~~~ef~~~ 214 (220)
T 3sjs_A 186 SAYQMIFMNPYYGPMKPFNPMEFGKFLDV 214 (220)
T ss_dssp HHHHHHHTSGGGCSCCCCCHHHHHHHHHH
T ss_pred HHHHHhcccCCCCCcccccceeHHHHHHH
Confidence 344567 999999 8899999865
No 303
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=99.21 E-value=1.6e-11 Score=98.89 Aligned_cols=72 Identities=13% Similarity=0.188 Sum_probs=60.5
Q ss_pred cHHHHHHHHHHHHhhc-CCCC-CccCHHHHHHHHHHhcCCCC-CHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 52 KPRCVRALKRIFILCD-HDRD-GALSDAELNDFQVKCFNSPL-QPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D-~d~d-G~is~~El~~~~~~~~g~~~-~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
.+.++..|+++|+.|| +|+| |+|+.+||+.+++..+|..+ +++++..+++.+ |.+++| |+|+||+.++..
T Consensus 17 le~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~------D~d~dG~Idf~EF~~~~~~ 90 (106)
T 2h2k_A 17 LEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSL------DVNQDSELKFNEYWRLIGE 90 (106)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHH------CTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHH------CCCCCCCCcHHHHHHHHHH
Confidence 3556889999999999 8997 79999999999876566544 357899999998 788899 999999998875
Q ss_pred HH
Q 014101 128 FI 129 (430)
Q Consensus 128 ~~ 129 (430)
..
T Consensus 91 ~~ 92 (106)
T 2h2k_A 91 LA 92 (106)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 304
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=99.21 E-value=5.7e-11 Score=95.27 Aligned_cols=70 Identities=9% Similarity=0.161 Sum_probs=60.3
Q ss_pred cHHHHHHHHHHHHhhc-CCCC-CccCHHHHHHHHHHhc----CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 52 KPRCVRALKRIFILCD-HDRD-GALSDAELNDFQVKCF----NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D-~d~d-G~is~~El~~~~~~~~----g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
.+..+..|+++|+.|| +|+| |+||.+||+.+++..+ +.++++++++.+++.+ |.|++| |+|+||+.+
T Consensus 8 le~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~------D~dgDG~Idf~EF~~~ 81 (104)
T 3zwh_A 8 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNL------DSNRDNEVDFQEYCVF 81 (104)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHH------CTTCSSSBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHH------cCCCCCCCcHHHHHHH
Confidence 3556899999999998 7886 8999999999988644 4557899999999999 788999 999999998
Q ss_pred HHH
Q 014101 125 HAL 127 (430)
Q Consensus 125 ~~~ 127 (430)
+..
T Consensus 82 m~~ 84 (104)
T 3zwh_A 82 LSS 84 (104)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 305
>2elf_A Protein translation elongation factor 1A; tRNA, pyrrolysine, structural genomics, NPPSFA; HET: CIT; 1.70A {Methanosarcina mazei}
Probab=99.21 E-value=7.8e-12 Score=123.39 Aligned_cols=118 Identities=15% Similarity=0.155 Sum_probs=82.8
Q ss_pred EEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEEEE
Q 014101 287 QCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFV 366 (430)
Q Consensus 287 kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv 366 (430)
+|+++|.+++|||||+++|+ ....|+.. ....+..+ ...+.+|||+|++.|.... ...++.+|++++|
T Consensus 23 ~i~iiG~~d~GKSTL~~~L~------~~giTi~~--~~~~~~~~--~~~i~iiDtPGh~~f~~~~--~~~~~~aD~ailV 90 (370)
T 2elf_A 23 NVAIIGTEKSGRTSLAANLG------KKGTSSDI--TMYNNDKE--GRNMVFVDAHSYPKTLKSL--ITALNISDIAVLC 90 (370)
T ss_dssp EEEEEESTTSSHHHHHHTTS------EEEEESSS--EEEEECSS--SSEEEEEECTTTTTCHHHH--HHHHHTCSEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHH------hCCEEEEe--eEEEEecC--CeEEEEEECCChHHHHHHH--HHHHHHCCEEEEE
Confidence 89999999999999999998 11123332 22344444 3458899999998886655 4677999999999
Q ss_pred EECCChhhHHHHHHHHHHHHhcCCCCCCCCcE-EEEEe-CCCCCCccC-c--HHHHHHHHHHhC
Q 014101 367 HDSSDESSWKRATELLVEVASYGEDTGFEVPC-LIVAA-KDDLDSFAM-A--IQDSTRVFTFLV 425 (430)
Q Consensus 367 ~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~Pi-ilVgn-K~Dl~~~~v-~--~~~~~~~~~~~g 425 (430)
+| + ...+.+..+++..+... ++|. ++|+| |+|+ +... . .+++.++++.++
T Consensus 91 vd-~-~g~~~qt~e~~~~~~~~------~i~~~ivvvNNK~Dl-~~~~~~~~~~~i~~~l~~~~ 145 (370)
T 2elf_A 91 IP-P-QGLDAHTGECIIALDLL------GFKHGIIALTRSDST-HMHAIDELKAKLKVITSGTV 145 (370)
T ss_dssp EC-T-TCCCHHHHHHHHHHHHT------TCCEEEEEECCGGGS-CHHHHHHHHHHHHHHTTTST
T ss_pred Ec-C-CCCcHHHHHHHHHHHHc------CCCeEEEEEEeccCC-CHHHHHHHHHHHHHHHHhcC
Confidence 99 4 35566667777666544 4676 88999 9999 5322 1 245666665543
No 306
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=99.21 E-value=8e-11 Score=91.80 Aligned_cols=71 Identities=18% Similarity=0.353 Sum_probs=63.7
Q ss_pred CccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
.+++.....|+++|+.||+|+||.|+.+||..++.. +|.+++.+++..++..+ |.+++| |+|+||+.++..
T Consensus 2 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~------d~~~dg~i~~~eF~~~~~~ 73 (92)
T 2kn2_A 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMIN-LGEKLTDEEVEQMIKEA------DLDGDGQVNYEEFVKMMMT 73 (92)
T ss_dssp CCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHH------CSSCCSSEEHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CCCCCCcEeHHHHHHHHHh
Confidence 456778899999999999999999999999999776 58889999999999998 678888 999999998754
No 307
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.21 E-value=2.6e-11 Score=108.70 Aligned_cols=44 Identities=23% Similarity=0.401 Sum_probs=21.0
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRV 102 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~ 102 (430)
.++++|+.||+|+||.|+.+||..++.. .|.++++++++.+++.
T Consensus 104 ~~~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~l~~~ 147 (198)
T 1juo_A 104 GWRQHFISFDTDRSGTVDPQELQKALTT-MGFRLSPQAVNSIAKR 147 (198)
T ss_dssp HHHHHHHTTCTTCCSEECHHHHHHHHHH-TTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHH
Confidence 3444455555555555555555544433 2444444444444444
No 308
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=99.20 E-value=6.2e-11 Score=96.45 Aligned_cols=71 Identities=8% Similarity=0.170 Sum_probs=62.3
Q ss_pred ccHHHHHHHHHHHHhhc-CCCCC-ccCHHHHHHHHHHh----cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHH
Q 014101 51 LKPRCVRALKRIFILCD-HDRDG-ALSDAELNDFQVKC----FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLF 123 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~D-~d~dG-~is~~El~~~~~~~----~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~ 123 (430)
.+..++..|+++|+.|| +|+|| +|+.+||+.+++.. +|.++++++++.+++.+ |.+++| |+|+||+.
T Consensus 16 ~~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~------D~dgdG~Idf~EF~~ 89 (113)
T 2lnk_A 16 PLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNL------DSNRDNEVDFQEYCV 89 (113)
T ss_dssp HHHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHH------CSSSSSCBCHHHHHH
T ss_pred CchhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHh------CCCCCCcEeHHHHHH
Confidence 35667899999999999 89997 99999999998753 46778999999999999 788999 99999999
Q ss_pred HHHH
Q 014101 124 LHAL 127 (430)
Q Consensus 124 ~~~~ 127 (430)
++..
T Consensus 90 ~m~~ 93 (113)
T 2lnk_A 90 FLSC 93 (113)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 309
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=99.20 E-value=6.7e-11 Score=91.95 Aligned_cols=73 Identities=19% Similarity=0.267 Sum_probs=65.9
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..|+++++..++++|+.||+|+||.|+.+||..+++. +|.+++.+++..++..+ |.+++| |+|+||+.++..
T Consensus 12 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~------D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRM-LGQNPTKEELDAIIEEV------DEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHH------CTTCCSSEEHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CCCCCCeEeHHHHHHHHHH
Confidence 3589999999999999999999999999999999776 58899999999999998 678888 999999998764
Q ss_pred H
Q 014101 128 F 128 (430)
Q Consensus 128 ~ 128 (430)
.
T Consensus 85 ~ 85 (90)
T 1avs_A 85 Q 85 (90)
T ss_dssp H
T ss_pred H
Confidence 3
No 310
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.20 E-value=3e-11 Score=95.34 Aligned_cols=70 Identities=21% Similarity=0.352 Sum_probs=62.0
Q ss_pred CccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHH
Q 014101 50 ALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALF 128 (430)
Q Consensus 50 ~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~ 128 (430)
.+++++++.++++|+.||+|+||+|+.+||..++++. | ++.+++..|++.+ |.+++| |+|+||+.++...
T Consensus 3 ~ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~-g--~~~~~~~~i~~~~------D~d~dG~i~~~EF~~~~~~~ 73 (95)
T 1c07_A 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKT-G--LPSTLLAHIWSLC------DTKDCGKLSKDQFALAFHLI 73 (95)
T ss_dssp SSCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTT-T--CCHHHHHHHHHHH------CTTCSSSEETTTHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc-C--CCHHHHHHHHHHH------CCCCCCcCCHHHHHHHHHHH
Confidence 4688999999999999999999999999999997764 4 6789999999988 778889 9999999987654
No 311
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.20 E-value=6e-11 Score=106.14 Aligned_cols=112 Identities=16% Similarity=0.199 Sum_probs=86.0
Q ss_pred cHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHH
Q 014101 52 KPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIE 130 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~ 130 (430)
++.....++++|+.+|.|+||.|+.+|+..++..+ +...+.+++..+++.+ |.+++| |+++||..++.....
T Consensus 47 ~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~-~~~~~~~~~~~~F~~~------D~d~~G~I~~~Ef~~~~~~~~~ 119 (198)
T 2r2i_A 47 SPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLV-LKGKVDQKLRWYFKLY------DVDGNGCIDRGELLNIIKAIRA 119 (198)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH-SSCCHHHHHHHHHHHH------CTTCSSCEEHHHHHHHHHHTTG
T ss_pred CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHH-ccCchHHHHHHHHHHh------cCCCCCcCcHHHHHHHHHHHHh
Confidence 45556679999999999999999999999997764 5667788899999988 788899 999999988652110
Q ss_pred cCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 131 KGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 131 ~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
.... ...++ ..+.+..+|+.+|.|+||.|+.+||..++..
T Consensus 120 -------------------------------~~~~---~~~~~--~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 159 (198)
T 2r2i_A 120 -------------------------------INRC---NEAMT--AEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159 (198)
T ss_dssp -------------------------------GGGS---SSCCC--HHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred -------------------------------hcCC---Cchhh--HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 0000 00111 1234788999999999999999999999864
No 312
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=99.19 E-value=7.8e-11 Score=96.11 Aligned_cols=68 Identities=16% Similarity=0.210 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhhc-CCCCC-ccCHHHHHHHHHHhcCCC-----CCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 53 PRCVRALKRIFILCD-HDRDG-ALSDAELNDFQVKCFNSP-----LQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~is~~El~~~~~~~~g~~-----~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
++++..|+++|+.|| +|+|| +|+.+||..+++..+|.. ++++++..+++.+ |.+++| |+|+||+.+
T Consensus 8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~------D~d~dG~I~f~EF~~~ 81 (113)
T 1xk4_C 8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDL------DTNADKQLSFEEFIML 81 (113)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHH------CTTCSSSBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHh------CCCCCCCEeHHHHHHH
Confidence 456789999999999 59999 999999999988455642 5789999999998 788889 999999998
Q ss_pred HH
Q 014101 125 HA 126 (430)
Q Consensus 125 ~~ 126 (430)
+.
T Consensus 82 ~~ 83 (113)
T 1xk4_C 82 MA 83 (113)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 313
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=99.18 E-value=8.9e-11 Score=93.52 Aligned_cols=71 Identities=14% Similarity=0.157 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHhhcCCC---CCccCHHHHHHHHHHhcCCCCC----HHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 53 PRCVRALKRIFILCDHDR---DGALSDAELNDFQVKCFNSPLQ----PSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~---dG~is~~El~~~~~~~~g~~~~----~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
+..+..|+++|+.||+|+ ||+||.+||+.+++..+|..++ +++++.+++.+ |.+++| |+|+||+.+
T Consensus 7 e~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~------D~d~DG~Idf~EF~~~ 80 (100)
T 3nxa_A 7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNL------DANHDGRISFDEYWTL 80 (100)
T ss_dssp HHHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHS------CCCSSCCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHh------CCCCCCCCcHHHHHHH
Confidence 456889999999999974 7999999999998887766555 67899999988 788999 999999999
Q ss_pred HHHHH
Q 014101 125 HALFI 129 (430)
Q Consensus 125 ~~~~~ 129 (430)
+....
T Consensus 81 m~~~~ 85 (100)
T 3nxa_A 81 IGGIT 85 (100)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87543
No 314
>2dy1_A Elongation factor G; translocation, GTP complex, structural genomics, NPPSFA; HET: GTP; 1.60A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1wdt_A*
Probab=99.18 E-value=6.7e-11 Score=125.40 Aligned_cols=132 Identities=12% Similarity=0.052 Sum_probs=90.8
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCC----------------CccceEEEEEEEcCCCeEEEEEEeCCChhH
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTP----------------TTDERYAVNVVDQPGGTKKTVVLREIPEEA 346 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~----------------t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~ 346 (430)
....+|+++|.+|+|||||++++++......... ..+.++......+......+.+|||+|++.
T Consensus 7 ~~~~~i~IiG~~gaGKTTLl~~L~~~~~~~~~~G~V~~g~~~~d~~~~e~~~giti~~~~~~~~~~~~~~nliDTpG~~~ 86 (665)
T 2dy1_A 7 AMIRTVALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVAPLLFRGHRVFLLDAPGYGD 86 (665)
T ss_dssp CCEEEEEEEESTTSSHHHHHHHHHHHTTSSSSCCCGGGTCCSSCCSHHHHHTTSCCSCEEEEEEETTEEEEEEECCCSGG
T ss_pred CCCcEEEEECCCCChHHHHHHHHHHhcCCCCccceecCCcccccCCHHHHhcCCeEEecceEEeeCCEEEEEEeCCCccc
Confidence 4457999999999999999999984322111000 012222222233322357788999999998
Q ss_pred HHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhC
Q 014101 347 VAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLV 425 (430)
Q Consensus 347 ~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g 425 (430)
|.... ..+++.+|++++|+|+++.-... ...++..+... ++|+++|+||+|+. ....+.++++++.++
T Consensus 87 f~~~~--~~~l~~ad~~ilVvD~~~g~~~q-t~~~~~~~~~~------~ip~ilv~NKiD~~--~~~~~~~~~l~~~l~ 154 (665)
T 2dy1_A 87 FVGEI--RGALEAADAALVAVSAEAGVQVG-TERAWTVAERL------GLPRMVVVTKLDKG--GDYYALLEDLRSTLG 154 (665)
T ss_dssp GHHHH--HHHHHHCSEEEEEEETTTCSCHH-HHHHHHHHHHT------TCCEEEEEECGGGC--CCHHHHHHHHHHHHC
T ss_pred hHHHH--HHHHhhcCcEEEEEcCCcccchh-HHHHHHHHHHc------cCCEEEEecCCchh--hhHHHHHHHHHHHhC
Confidence 88766 67889999999999988754433 33455555443 68999999999998 445567777777766
No 315
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.18 E-value=1.1e-10 Score=103.45 Aligned_cols=114 Identities=14% Similarity=0.166 Sum_probs=84.7
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
..++++|+.+|.|+||.|+.+|+..++.. .+...+.+++..+++.+ |.+++| |+++||..++....
T Consensus 63 ~~~~~~f~~~D~d~~G~i~~~ef~~~~~~-~~~~~~~~~~~~~f~~~------D~d~~G~i~~~e~~~~~~~~~------ 129 (190)
T 2l2e_A 63 AFAEYVFNVFDADKNGYIDFKEFICALSV-TSRGELNDKLIWAFQLY------DLDNNGLISYDEMLRIVDAIY------ 129 (190)
T ss_dssp HHHHHHHHHHCSSSTTCEEHHHHHHHHTT-SSCSCSHHHHHHHHHHH------CTTSCSCBCHHHHHHHHHHHH------
T ss_pred HHHHHHHHHhcCCCCCeEeHHHHHHHHHH-HcCCCHHHHHHHHHhHc------cCCCCCcCcHHHHHHHHHHHH------
Confidence 35778999999999999999999988654 46778889999999998 778889 99999999865321
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP 208 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~ 208 (430)
+..|.. ...+. .... ..+.+.++|+.+|.|+||.|+.+||..++...|
T Consensus 130 ------~~~g~~--------------~~~~~--~~~~---~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 177 (190)
T 2l2e_A 130 ------KMVGSM--------------VKLPE--DEDT---PEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDP 177 (190)
T ss_dssp ------HHHHHH--------------SCCCS--SCCC---THHHHHHHHHHHTCCSSCCBCHHHHHHHHHTCT
T ss_pred ------HHhccc--------------cCccc--cccc---HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCc
Confidence 001100 00000 0001 124578999999999999999999999997643
No 316
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=99.18 E-value=1.2e-11 Score=98.68 Aligned_cols=69 Identities=13% Similarity=0.295 Sum_probs=58.5
Q ss_pred ccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhh
Q 014101 169 SVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSE 237 (430)
Q Consensus 169 ~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~ 237 (430)
...++.+..+.|+++|+.||+||||+|+.+||+.++...+..+ .+...+++.+|.|+||.|+|+||++.
T Consensus 27 ~~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~ 97 (100)
T 2lv7_A 27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTL 97 (100)
T ss_dssp CCCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHH
Confidence 3467778888899999999999999999999999998754433 33456788999999999999999975
No 317
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=99.18 E-value=5.2e-11 Score=91.64 Aligned_cols=70 Identities=21% Similarity=0.363 Sum_probs=61.9
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
..+++++.+.++++|+.||+|+||.|+.+||..++.. +| +++.+++..+++.+ |.+++| |+|+||+.++.
T Consensus 3 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~------D~~~dg~i~~~eF~~~~~ 73 (86)
T 2opo_A 3 AEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKT-LG-SVTPDEVRRMMAEI------DTDGDGFISFDEFTDFAR 73 (86)
T ss_dssp ---CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHT-TT-TCCHHHHHHHHHHH------CTTCSSEECHHHHHHHHH
T ss_pred ccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-cC-CCCHHHHHHHHHHh------CCCCCCcCcHHHHHHHHH
Confidence 4689999999999999999999999999999999776 46 89999999999998 678889 99999999865
No 318
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=99.17 E-value=7.3e-11 Score=95.97 Aligned_cols=72 Identities=17% Similarity=0.310 Sum_probs=64.3
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...+++++++.++++|+.||+|+||+|+.+||..+++ |..++.+++..|++.+ |.+++| |+|+||+.++.
T Consensus 5 ~w~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~---~~~~~~~~~~~i~~~~------D~d~dG~I~~~EF~~~~~ 75 (111)
T 2kgr_A 5 EWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM---QSSLPQAQLASIWNLS------DIDQDGKLTAEEFILAMH 75 (111)
T ss_dssp CSSSCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH---TTCCCHHHHHHHHHHH------CSSCCSEEEHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH---hCCCCHHHHHHHHHHH------CCCCCCCCcHHHHHHHHH
Confidence 4458899999999999999999999999999999976 6778999999999988 788899 99999999876
Q ss_pred HH
Q 014101 127 LF 128 (430)
Q Consensus 127 ~~ 128 (430)
..
T Consensus 76 ~~ 77 (111)
T 2kgr_A 76 LI 77 (111)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 319
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=99.17 E-value=6.6e-11 Score=91.12 Aligned_cols=74 Identities=18% Similarity=0.222 Sum_probs=64.2
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHH---HHHHHHHHHhhhcCCccCCC-cCHHhHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSE---IVGVKRVVQEKLREGVNERG-LTLAGFLF 123 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e---~~~i~~~~~~~~~~d~~~~g-i~~~eFl~ 123 (430)
...|+++++..++++|..||+|+||.|+.+||..+++. +|..++.++ +..++..+ |.+++| |+| ||+.
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~~~~------d~~~~g~i~~-eF~~ 76 (86)
T 1j7q_A 5 ARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTK-LGQTYTKRETEAIMKEARGP------KGDKKNIGPE-EWLT 76 (86)
T ss_dssp CCCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHH-TSCCCSHHHHHHHHHHHHCS------SCSSCCBCTT-HHHH
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-HcCCCCHHHHHHHHHHHHHh------CCCCCCcCCH-HHHH
Confidence 35688899999999999999999999999999999776 588899999 88888776 678888 999 9999
Q ss_pred HHHHHH
Q 014101 124 LHALFI 129 (430)
Q Consensus 124 ~~~~~~ 129 (430)
++...+
T Consensus 77 ~~~~~~ 82 (86)
T 1j7q_A 77 LCSKWV 82 (86)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876543
No 320
>1dar_A EF-G, elongation factor G; ribosomal translocase, translational GTPase; HET: GDP; 2.40A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 PDB: 1elo_A 1ktv_A 2om7_L* 2wri_Y* 2wrk_Y* 2xsy_Y* 2xuy_Y* 2j7k_A* 2efg_A* 1jqm_B 1efg_A* 1fnm_A* 1pn6_A 2bm1_A* 2bm0_A* 2bv3_A* 3izp_E 1zn0_B 1jqs_C 2bcw_C ...
Probab=99.17 E-value=4.4e-11 Score=127.28 Aligned_cols=129 Identities=17% Similarity=0.067 Sum_probs=87.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCC--CCC------C------------CcCCCccceEEEEEEEcCCCeEEEEEEeCC
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGR--PFS------D------------NYTPTTDERYAVNVVDQPGGTKKTVVLREI 342 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~--~~~------~------------~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~ 342 (430)
....+|+|+|.+|+|||||+++++.. .+. . ....|+.. ....+.+. ...+.+|||+
T Consensus 10 ~~~~~I~IvG~~~aGKTTL~~~Ll~~~g~~~~~g~v~~~~~~~d~~~~E~~~giTi~~--~~~~~~~~--~~~i~liDTP 85 (691)
T 1dar_A 10 KRLRNIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITA--AVTTCFWK--DHRINIIDTP 85 (691)
T ss_dssp GGEEEEEEEECTTSCHHHHHHHHHHHHCC----------------------------C--CEEEEEET--TEEEEEECCC
T ss_pred ccccEEEEECCCCCCHHHHHHHHHHhcCCCcccceecCCceeccCchhhhhccccccc--ceEEEEEC--CeEEEEEECc
Confidence 45689999999999999999999831 110 0 01122222 12233333 4678899999
Q ss_pred ChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHH
Q 014101 343 PEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFT 422 (430)
Q Consensus 343 G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~ 422 (430)
|+..|.... ..+++.+|++++|+|+++..++.....|.. +... ++|+++|+||+|+.... ......++.+
T Consensus 86 G~~df~~~~--~~~l~~aD~~ilVvDa~~g~~~~t~~~~~~-~~~~------~~p~ivviNKiD~~~~~-~~~~~~~l~~ 155 (691)
T 1dar_A 86 GHVDFTIEV--ERSMRVLDGAIVVFDSSQGVEPQSETVWRQ-AEKY------KVPRIAFANKMDKTGAD-LWLVIRTMQE 155 (691)
T ss_dssp SSTTCHHHH--HHHHHHCSEEEEEEETTTCSCHHHHHHHHH-HHHT------TCCEEEEEECTTSTTCC-HHHHHHHHHH
T ss_pred CccchHHHH--HHHHHHCCEEEEEEECCCCcchhhHHHHHH-HHHc------CCCEEEEEECCCcccCC-HHHHHHHHHH
Confidence 998887766 678899999999999998877776665543 3332 68999999999998643 2334455555
Q ss_pred HhC
Q 014101 423 FLV 425 (430)
Q Consensus 423 ~~g 425 (430)
.++
T Consensus 156 ~l~ 158 (691)
T 1dar_A 156 RLG 158 (691)
T ss_dssp TTC
T ss_pred HhC
Confidence 444
No 321
>3mca_A HBS1, elongation factor 1 alpha-like protein; protein protein complex, translation regulation; 2.74A {Schizosaccharomyces pombe}
Probab=99.17 E-value=6e-12 Score=131.56 Aligned_cols=118 Identities=18% Similarity=0.158 Sum_probs=62.2
Q ss_pred cCceeEEEEeCCCCCCHHHHHHHHhCCCCC-------------------------------CCcCCCccceEEEEEEEcC
Q 014101 282 ERNVFQCFVFGPKKAGKSVLLNSFLGRPFS-------------------------------DNYTPTTDERYAVNVVDQP 330 (430)
Q Consensus 282 ~~~~~kI~vvG~~~vGKSSLi~~l~~~~~~-------------------------------~~~~~t~~~~~~~~~v~~~ 330 (430)
.+..++|+++|.+|+|||||+++|++.... ....+.++.+.....+..+
T Consensus 174 ~k~~~~I~iiG~~d~GKSTLi~~Ll~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~~~D~~~~E~~~GiTid~~~~~~~~~ 253 (592)
T 3mca_A 174 PKPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESD 253 (592)
T ss_dssp CCCEEEEEEECCSSSTHHHHHHHHHHHHHCC-------------------------------------------------
T ss_pred CCCccEEEEEcCCCCCHHHHHHHHHHHcCCcchHHHHHHHHhHhhcCCcchhhhhhhccchhhhcCCeeEEeeEEEEEeC
Confidence 456789999999999999999999632100 0001222333322333333
Q ss_pred CCeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChh---hH---HHHHHHHHHHHhcCCCCCCCCc-EEEEEe
Q 014101 331 GGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDES---SW---KRATELLVEVASYGEDTGFEVP-CLIVAA 403 (430)
Q Consensus 331 ~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~---S~---~~~~~~l~~l~~~~~~~~~~~P-iilVgn 403 (430)
...+.+|||+|++.|.... ...++.+|++|+|+|+++.. ++ ....+.+..+... ++| +|+|+|
T Consensus 254 --~~~i~iiDTPGh~~f~~~~--~~~~~~aD~alLVVDa~~g~~e~gi~~~~qt~e~l~~~~~l------gip~iIvviN 323 (592)
T 3mca_A 254 --KKIYEIGDAPGHRDFISGM--IAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRAL------GISEIVVSVN 323 (592)
T ss_dssp -------CCEEESSSEEEEEC--CC-------CCSEEEEEECCSSTTSCSCSSHHHHHHHHHHS------SCCCEEEEEE
T ss_pred --CeEEEEEECCChHHHHHHH--HHHHhhCCEEEEEEECCCCccccccccchHHHHHHHHHHHc------CCCeEEEEEe
Confidence 3567899999999887665 67789999999999998532 11 1122222223322 455 999999
Q ss_pred CCCCCC
Q 014101 404 KDDLDS 409 (430)
Q Consensus 404 K~Dl~~ 409 (430)
|+|+.+
T Consensus 324 KiDl~~ 329 (592)
T 3mca_A 324 KLDLMS 329 (592)
T ss_dssp CGGGGT
T ss_pred cccccc
Confidence 999975
No 322
>1jal_A YCHF protein; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: c.37.1.8 d.15.10.2
Probab=99.17 E-value=1.5e-10 Score=113.21 Aligned_cols=86 Identities=20% Similarity=0.150 Sum_probs=56.2
Q ss_pred eEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCe---------------EEEEEEeCCChhHHH--
Q 014101 286 FQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGT---------------KKTVVLREIPEEAVA-- 348 (430)
Q Consensus 286 ~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~---------------~~~~i~d~~G~e~~~-- 348 (430)
++|+++|.+|||||||+|++++........|..+.......+.+++.. ..+.+||++|.....
T Consensus 3 ~kI~IVG~pnvGKSTL~n~Lt~~~~~v~~~p~tTi~p~~g~v~~~~~r~~~l~~~~~~~~~~~~~i~lvDtpGl~~~a~~ 82 (363)
T 1jal_A 3 FKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERILPTTMEFVDIAGLVAGASK 82 (363)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHTC------CCCCCCCCSSEEECCCHHHHHHHHHHCCSEEECCEEEEEECCSCCTTHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCcccCCCCceECceEEEEecCCcccceeeeeecccceeeeEEEEEECCCCcccccc
Confidence 689999999999999999999877433333322222222345555321 467899999976543
Q ss_pred --hhh-ccccccccccEEEEEEECCC
Q 014101 349 --KLL-SNKDSLAACDIAVFVHDSSD 371 (430)
Q Consensus 349 --~~~-~~~~~~~~ad~vilv~D~t~ 371 (430)
.+. ....+++.+|++++|+|+++
T Consensus 83 ~~gl~~~fl~~ir~ad~il~VvD~~~ 108 (363)
T 1jal_A 83 GEGLGNKFLANIRETDAIGHVVRCFE 108 (363)
T ss_dssp HGGGTCCHHHHHHTCSEEEEEEECSC
T ss_pred cchHHHHHHHHHHhcCeEEEEEecCC
Confidence 222 01235789999999999986
No 323
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.16 E-value=8.7e-11 Score=105.77 Aligned_cols=142 Identities=13% Similarity=0.115 Sum_probs=95.5
Q ss_pred ccCCccHHHHHH------------HHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCC
Q 014101 47 ESQALKPRCVRA------------LKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNER 114 (430)
Q Consensus 47 ~~~~lt~~~~~~------------l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~ 114 (430)
.++.++..+... +.++|+.+|.|+||.|+.+|+..++..........+++..+++.+ |.+++
T Consensus 52 ~~G~i~~~e~~~~l~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~------D~d~~ 125 (207)
T 2ehb_A 52 DDGLIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLY------DLRQT 125 (207)
T ss_dssp CSSCEEHHHHHHHHHSCTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHH------CTTCC
T ss_pred CCCccCHHHHHHHHhccccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHh------CCCCC
Confidence 455666665442 467999999999999999999988765533445577788888888 78899
Q ss_pred C-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHH-HHHHHHHHHHHhcCCCC
Q 014101 115 G-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNE-AIDFLKGIFELFDADDD 192 (430)
Q Consensus 115 g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~l~~~F~~fD~d~d 192 (430)
| |+.+||..++.... ...| ..++++ ..+.+..+|+.+|.|+|
T Consensus 126 G~I~~~E~~~~l~~~~------------~~~g------------------------~~~~~~~~~~~~~~~f~~~D~d~d 169 (207)
T 2ehb_A 126 GFIEREELKEMVVALL------------HESE------------------------LVLSEDMIEVMVDKAFVQADRKND 169 (207)
T ss_dssp SSEEHHHHHHHHHHHH------------HHHT------------------------CCCCHHHHHHHHHHHHHHHCTTCS
T ss_pred CcCcHHHHHHHHHHHH------------HHcc------------------------cccCHHHHHHHHHHHHHHhCCCCC
Confidence 9 99999998865321 1111 012222 23446789999999999
Q ss_pred CCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHH
Q 014101 193 NSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFL 235 (430)
Q Consensus 193 G~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~ 235 (430)
|.|+.+||..++...|... ..+ .....++..++|.+|+
T Consensus 170 G~I~~~Ef~~~~~~~~~~~---~~~--~~~~~~~~~~~f~~~~ 207 (207)
T 2ehb_A 170 GKIDIDEWKDFVSLNPSLI---KNM--TLPYLKDINRTFPSFV 207 (207)
T ss_dssp SEECHHHHHHHHHHCGGGG---GGG--CCTTTTSTTTC-----
T ss_pred CcCcHHHHHHHHHhChHHH---HHh--cchhhhhhhhcCcCcC
Confidence 9999999999998654321 111 1223467788888875
No 324
>1n0u_A EF-2, elongation factor 2; G-protein, CIS-proline, translation; HET: SO1; 2.12A {Saccharomyces cerevisiae} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1n0v_C 1s1h_T 2e1r_A* 2npf_A* 2p8w_T* 3dny_T 3b82_A* 1zm2_A* 1zm3_A* 1zm4_A* 1zm9_A* 2p8x_T* 2p8y_T* 2p8z_T* 2zit_A* 1u2r_A* 3b78_A* 3b8h_A*
Probab=99.16 E-value=4.7e-11 Score=129.62 Aligned_cols=118 Identities=19% Similarity=0.157 Sum_probs=84.2
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCC------------CCCC----cC--CCccceEEEEEEE------------cCCC
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRP------------FSDN----YT--PTTDERYAVNVVD------------QPGG 332 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~------------~~~~----~~--~t~~~~~~~~~v~------------~~~~ 332 (430)
....+|+|+|.+|+|||||+++++... +... .. .|+........+. .++.
T Consensus 17 ~~~rnI~IiG~~~~GKTTL~~~Ll~~~g~i~~~~~~~~~~~D~~~~E~~rgiTI~~~~~~~~~~~~~~~~~~i~~~~~~~ 96 (842)
T 1n0u_A 17 TNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVKEIKQKTDGN 96 (842)
T ss_dssp GGEEEEEEECCGGGTHHHHHHHHHHHHBCCBC------------------CCCBCCCEEEEEEECCHHHHHHCSSCCCSS
T ss_pred ccccEEEEECCCCCCHHHHHHHHHHhcCCcccccCCCceeecCchhhhhcceeEeeceeEEEecccccccccccccccCC
Confidence 456799999999999999999998641 1100 01 1222222222222 2334
Q ss_pred eEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC
Q 014101 333 TKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDS 409 (430)
Q Consensus 333 ~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~ 409 (430)
...+.+|||+|+..|.... ..+++.+|++|+|+|+++..+++....|.... .. ++|+++|+||+|+..
T Consensus 97 ~~~i~liDTPG~~df~~~~--~~~l~~aD~ailVvDa~~g~~~qt~~~~~~~~-~~------~~p~ilviNK~D~~~ 164 (842)
T 1n0u_A 97 SFLINLIDSPGHVDFSSEV--TAALRVTDGALVVVDTIEGVCVQTETVLRQAL-GE------RIKPVVVINKVDRAL 164 (842)
T ss_dssp EEEEEEECCCCCCSSCHHH--HHHHHTCSEEEEEEETTTBSCHHHHHHHHHHH-HT------TCEEEEEEECHHHHH
T ss_pred CceEEEEECcCchhhHHHH--HHHHHhCCEEEEEEeCCCCCCHHHHHHHHHHH-Hc------CCCeEEEEECCCcch
Confidence 6788899999999888776 67889999999999999988888766565433 22 689999999999873
No 325
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.16 E-value=2.7e-10 Score=102.30 Aligned_cols=117 Identities=15% Similarity=0.074 Sum_probs=83.7
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.++++|+.+|.|+||.|+.+|+..++... +.....+++..+++.+ |.+++| |+++||..++.....
T Consensus 60 ~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~-~~~~~~~~~~~~F~~~------D~d~~G~I~~~E~~~~l~~~~~------ 126 (204)
T 1jba_A 60 YVEAMFRAFDTNGDNTIDFLEYVAALNLV-LRGTLEHKLKWTFKIY------DKDRNGCIDRQELLDIVESIYK------ 126 (204)
T ss_dssp HHHHHHHHHCCSSSSEECHHHHHHHHHHH-SSCCCTHHHHHHHHHH------CSSCSSCBCHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHcCCCCCeEeHHHHHHHHHHH-ccCCHHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHHHHH------
Confidence 56789999999999999999999997765 5567788899999998 788899 999999998653311
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
..|... .+.. ...+.... ...+.+..+|+.+|.|+||.|+.+||..++...
T Consensus 127 ------~~g~~~-----~~~~-------~~~~g~~~--~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~ 177 (204)
T 1jba_A 127 ------LKKACS-----VEVE-------AEQQGKLL--TPEEVVDRIFLLVDENGDGQLSLNEFVEGARRD 177 (204)
T ss_dssp ------HHHHSS-----CCTT-------SSTTTCCC--CHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTT
T ss_pred ------HhCCCC-----cccc-------ccccCchh--hHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHcC
Confidence 001000 0000 00000000 123457899999999999999999999999753
No 326
>2xex_A Elongation factor G; GTPase, translation, biosynthetic protein; 1.90A {Staphylococcus aureus}
Probab=99.15 E-value=1.4e-10 Score=123.50 Aligned_cols=131 Identities=15% Similarity=0.049 Sum_probs=86.7
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhC--CCCCCC---c-------------CCCccceEEEEEEEcCCCeEEEEEEeCCCh
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLG--RPFSDN---Y-------------TPTTDERYAVNVVDQPGGTKKTVVLREIPE 344 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~--~~~~~~---~-------------~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~ 344 (430)
....+|+|+|.+|+|||||+++++. +.+... . .+.++.......+.+. ...+.+|||+|+
T Consensus 8 ~~~~~I~IvG~~~aGKSTL~~~Ll~~~~~~~~~g~v~~~~~~~D~~~~e~~~giTi~~~~~~~~~~--~~~i~liDTPG~ 85 (693)
T 2xex_A 8 EKTRNIGIMAHIDAGKTTTTERILYYTGRIHKIGETHEGASQMDWMEQEQDRGITITSAATTAAWE--GHRVNIIDTPGH 85 (693)
T ss_dssp TTEEEEEEECCGGGTHHHHHHHHHHHHSSCC-------------------------CCSEEEEEET--TEEEEEECCCCC
T ss_pred ccceEEEEECCCCCCHHHHHHHHHHhcCCccccccccCCceecccchhhhhcCceEeeeeEEEEEC--CeeEEEEECcCC
Confidence 4568999999999999999999984 221100 0 0111111112234444 367889999999
Q ss_pred hHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHh
Q 014101 345 EAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFL 424 (430)
Q Consensus 345 e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~ 424 (430)
..+.... ..+++.+|++++|+|+++..++.....|. .+... ++|+++|+||+|+.... .....+++.+.+
T Consensus 86 ~df~~~~--~~~l~~aD~~llVvDa~~g~~~~~~~~~~-~~~~~------~~p~ilviNK~Dl~~~~-~~~~~~~l~~~l 155 (693)
T 2xex_A 86 VDFTVEV--ERSLRVLDGAVTVLDAQSGVEPQTETVWR-QATTY------GVPRIVFVNKMDKLGAN-FEYSVSTLHDRL 155 (693)
T ss_dssp SSCCHHH--HHHHHHCSEEEEEEETTTBSCHHHHHHHH-HHHHT------TCCEEEEEECTTSTTCC-HHHHHHHHHHHH
T ss_pred cchHHHH--HHHHHHCCEEEEEECCCCCCcHHHHHHHH-HHHHc------CCCEEEEEECCCccccc-hHHHHHHHHHHh
Confidence 8877665 67889999999999999877776655553 34433 68999999999998742 223344444444
Q ss_pred C
Q 014101 425 V 425 (430)
Q Consensus 425 g 425 (430)
+
T Consensus 156 ~ 156 (693)
T 2xex_A 156 Q 156 (693)
T ss_dssp C
T ss_pred C
Confidence 4
No 327
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=99.15 E-value=6.5e-11 Score=92.49 Aligned_cols=71 Identities=18% Similarity=0.343 Sum_probs=62.6
Q ss_pred ccCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 47 ESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 47 ~~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
....|+++++..++++|+.||+|+||.|+.+||..++..+ | ++.+++..+++.+ |.+++| |+|+||+.++
T Consensus 17 ~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-g--~~~~~~~~~~~~~------D~d~dg~I~~~EF~~~~ 87 (91)
T 2pmy_A 17 QGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTEL-R--VRPADAEAVFQRL------DADRDGAITFQEFARGF 87 (91)
T ss_dssp --CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHT-T--CCHHHHHHHHHHH------CTTCSSEECHHHHTHHH
T ss_pred HhccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHc-C--cCHHHHHHHHHHh------CCCCCCCEeHHHHHHHH
Confidence 3567899999999999999999999999999999997764 5 6889999999998 678889 9999999886
Q ss_pred H
Q 014101 126 A 126 (430)
Q Consensus 126 ~ 126 (430)
.
T Consensus 88 ~ 88 (91)
T 2pmy_A 88 L 88 (91)
T ss_dssp H
T ss_pred H
Confidence 5
No 328
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.14 E-value=2.2e-10 Score=104.99 Aligned_cols=144 Identities=14% Similarity=0.141 Sum_probs=96.0
Q ss_pred ccCCccHHHHHH------------HHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCC
Q 014101 47 ESQALKPRCVRA------------LKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNER 114 (430)
Q Consensus 47 ~~~~lt~~~~~~------------l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~ 114 (430)
.++.++..+... ++++|+.+|.|+||.|+.+|+..++..........+++..+++.+ |.+++
T Consensus 63 ~~G~I~~~El~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~------D~d~~ 136 (226)
T 2zfd_A 63 DDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLY------DLKQQ 136 (226)
T ss_dssp CSSSBCHHHHHHHHHSCSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHH------CTTSS
T ss_pred CCCeEcHHHHHHHHhccCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHh------CCCCC
Confidence 456676666543 466999999999999999999998776544445677788888888 78899
Q ss_pred C-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHH-HHHHHHHHHHHhcCCCC
Q 014101 115 G-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNE-AIDFLKGIFELFDADDD 192 (430)
Q Consensus 115 g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~l~~~F~~fD~d~d 192 (430)
| |+++||..++.... +..| ..+++. ..+.+.++|+.+|.|+|
T Consensus 137 G~Is~~E~~~~l~~~~------------~~~g------------------------~~~~~~~~~~~~~~~f~~~D~d~d 180 (226)
T 2zfd_A 137 GFIERQEVKQMVVATL------------AESG------------------------MNLKDTVIEDIIDKTFEEADTKHD 180 (226)
T ss_dssp SSEEHHHHHHHHHHHH------------HHTT------------------------CCCCHHHHHHHHHHHHHHHCSSCS
T ss_pred CcccHHHHHHHHHHHH------------HHcC------------------------CCCCHHHHHHHHHHHHHHhCCCCC
Confidence 9 99999998865321 1111 012222 23345789999999999
Q ss_pred CCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhh
Q 014101 193 NSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSE 237 (430)
Q Consensus 193 G~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~ 237 (430)
|.|+.+||..++...|... ..+ ....-++..++|.+|+..
T Consensus 181 G~I~~~EF~~~~~~~~~~~---~~~--~~~~~~~~~~~f~~~~~~ 220 (226)
T 2zfd_A 181 GKIDKEEWRSLVLRHPSLL---KNM--TLQYLKDITTTFPSFVFH 220 (226)
T ss_dssp SEECHHHHHHHHHHSGGGG---GGG--CCGGGGGHHHHC------
T ss_pred CcCcHHHHHHHHHhChHHH---HHh--chHHhhchhhcchhHHhh
Confidence 9999999999997643321 111 112234556777777765
No 329
>2rdo_7 EF-G, elongation factor G; elongation factor G, EF-G, RRF, GDPNP, 50S subunit, cryo-EM, REAL-space refinement, ribonucleoprotein; 9.10A {Escherichia coli} PDB: 3j0e_H
Probab=99.14 E-value=3.3e-10 Score=120.70 Aligned_cols=119 Identities=13% Similarity=-0.004 Sum_probs=81.1
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCC--CCCCC-----------c-----CCCccceEEEEEEEcC-----CCeEEEEEE
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGR--PFSDN-----------Y-----TPTTDERYAVNVVDQP-----GGTKKTVVL 339 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~--~~~~~-----------~-----~~t~~~~~~~~~v~~~-----~~~~~~~i~ 339 (430)
....+|+|+|..|+|||||+++|+.. .+... + ...++.......+.+. +....+.+|
T Consensus 8 ~~~~~I~IiG~~~~GKTTL~~~Ll~~~g~~~~~g~v~~g~~~~D~~~~E~~rgiTi~~~~~~~~~~~~~~~~~~~~i~li 87 (704)
T 2rdo_7 8 ARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINII 87 (704)
T ss_pred ccccEEEEECCCCCCHHHHHHHHHHhcCCcccccccCCCceeecChhhHHhcCceeeeceEEEEECCccccCCceeEEEE
Confidence 44679999999999999999999743 11110 0 0011111111223333 233678899
Q ss_pred eCCChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 340 REIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 340 d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
||+|+..|.... ..+++.+|++|+|+|+++..+......| ..+... ++|+++|+||+|+...
T Consensus 88 DTPG~~df~~~~--~~~l~~aD~aIlVvDa~~gv~~qt~~~~-~~~~~~------~ip~ilviNKiD~~~~ 149 (704)
T 2rdo_7 88 DTPGHVDFTIEV--ERSMRVLDGAVMVYCAVGGVQPQSETVW-RQANKY------KVPRIAFVNKMDRMGA 149 (704)
T ss_pred eCCCccchHHHH--HHHHHHCCEEEEEEeCCCCCcHHHHHHH-HHHHHc------CCCEEEEEeCCCcccc
Confidence 999999887766 6788999999999999986655544444 333322 6899999999999774
No 330
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.13 E-value=2.1e-11 Score=98.93 Aligned_cols=72 Identities=19% Similarity=0.159 Sum_probs=62.5
Q ss_pred ccCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 47 ESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 47 ~~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
....++++++..++++|+.||+|+||+|+.+||+.++++ +| ++.+++..|++.+ |.+++| |+|+||+.+|
T Consensus 12 ~~~~ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-~g--l~~~el~~i~~~~------D~d~dG~I~~~EF~~~m 82 (110)
T 1iq3_A 12 EPWRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK-SK--LSIPELSYIWELS------DADCDGALTLPEFCAAF 82 (110)
T ss_dssp SSCCCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCS-SS--CSSCCHHHHHHHH------CSSSCSEEEHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-cC--CCHHHHHHHHHHH------cCCCCCcCcHHHHHHHH
Confidence 345678888999999999999999999999999998754 34 6788999999998 788999 9999999987
Q ss_pred HH
Q 014101 126 AL 127 (430)
Q Consensus 126 ~~ 127 (430)
..
T Consensus 83 ~~ 84 (110)
T 1iq3_A 83 HL 84 (110)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 331
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=99.13 E-value=1.5e-10 Score=93.19 Aligned_cols=69 Identities=20% Similarity=0.208 Sum_probs=62.1
Q ss_pred CCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 49 QALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 49 ~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
..++++++..++++|+.||+ +||+|+.+||+.++++. | ++++++..|++.+ |.+++| |+|+||+.+|..
T Consensus 7 w~ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~-g--l~~~el~~i~~~~------D~d~dG~id~~EF~~~m~~ 76 (106)
T 1eh2_A 7 WAVKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNS-K--LPVDILGRVWELS------DIDHDGMLDRDEFAVAMFL 76 (106)
T ss_dssp CSSCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTT-T--CCHHHHHHHHHHH------CSSCSSBCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHc-C--CCHHHHHHHHHHH------cCCCCCcCcHHHHHHHHHH
Confidence 45789999999999999999 99999999999998764 5 6899999999998 788999 999999998764
No 332
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=99.13 E-value=1.9e-10 Score=91.48 Aligned_cols=70 Identities=20% Similarity=0.255 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHhhc-CCCCC-ccCHHHHHHHHHHh----cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 53 PRCVRALKRIFILCD-HDRDG-ALSDAELNDFQVKC----FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~is~~El~~~~~~~----~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
+.++..|+++|+.|| +|+|| +|+.+||..+++.. +|.+++++++..+++.+ |.+++| |+|+||+.++
T Consensus 6 ~~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~------D~d~dG~I~f~EF~~~~ 79 (99)
T 2y5i_A 6 EGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDL------DSNKDNEVDFNEFVVLV 79 (99)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHH------CTTCSSSEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHH------CCCCCCcCcHHHHHHHH
Confidence 456889999999997 89998 99999999998763 46778999999999998 788889 9999999987
Q ss_pred HHH
Q 014101 126 ALF 128 (430)
Q Consensus 126 ~~~ 128 (430)
...
T Consensus 80 ~~~ 82 (99)
T 2y5i_A 80 AAL 82 (99)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 333
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=99.13 E-value=1.4e-10 Score=91.49 Aligned_cols=69 Identities=13% Similarity=0.193 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhhc-CCC-CCccCHHHHHHHHHHh----cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 53 PRCVRALKRIFILCD-HDR-DGALSDAELNDFQVKC----FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~-dG~is~~El~~~~~~~----~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
+.++..|+++|+.|| +|+ +|+|+.+||+.+++.. +|.++++++++.+++.+ |.+++| |+|+||+.++
T Consensus 5 ~~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~------D~d~dG~I~f~EF~~~~ 78 (95)
T 1j55_A 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDL------DANGDAQVDFSEFIVFV 78 (95)
T ss_dssp HHHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHH------CSSSSSSEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHh------CCCCCCcCCHHHHHHHH
Confidence 456889999999999 799 4899999999998764 35677889999999998 788899 9999999987
Q ss_pred HH
Q 014101 126 AL 127 (430)
Q Consensus 126 ~~ 127 (430)
..
T Consensus 79 ~~ 80 (95)
T 1j55_A 79 AA 80 (95)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 334
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.12 E-value=1.7e-10 Score=101.51 Aligned_cols=112 Identities=11% Similarity=0.107 Sum_probs=82.4
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
..++++|+.+|.|+||.|+.+|+..++... +.....+++..+++.+ |.+++| |+++||..++.....
T Consensus 56 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~-~~~~~~~~~~~~f~~~------D~d~~G~i~~~e~~~~~~~~~~----- 123 (183)
T 1s6c_A 56 TYAHYLFNAFDTTQTGSVKFEDFVTALSIL-LRGTVHEKLRWTFNLY------DINKDGYINKEEMMDIVKAIYD----- 123 (183)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHH-HHCCHHHHHHHHHHHH------CTTCSSCEEHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHHH-cCCCHHHHHHHHHHHh------CCCCCCeEcHHHHHHHHHHHHH-----
Confidence 356889999999999999999999997754 4456788888999888 778899 999999998653211
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCH-HHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTN-EAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
.+|.... | .++. ...+.+.++|+.+|.|+||.|+.+||..++...
T Consensus 124 -------~~g~~~~--------~------------~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~ 169 (183)
T 1s6c_A 124 -------MMGKYTY--------P------------VLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQED 169 (183)
T ss_dssp -------HTC-------------------------------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSC
T ss_pred -------HhccccC--------c------------CccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcC
Confidence 1111000 0 0110 112457889999999999999999999998653
No 335
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1
Probab=99.10 E-value=1.6e-10 Score=115.24 Aligned_cols=139 Identities=19% Similarity=0.127 Sum_probs=90.6
Q ss_pred eEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhH----HHhhh-ccccccccc
Q 014101 286 FQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEA----VAKLL-SNKDSLAAC 360 (430)
Q Consensus 286 ~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~----~~~~~-~~~~~~~~a 360 (430)
-.|+++|++|||||||++++++........+..+.......+..++ ...+.+||++|... ...+. .....+..+
T Consensus 158 ~~VgLVG~~gAGKSTLL~~Lsg~~~~i~~~~ftTl~p~~G~V~~~~-~~~~~l~DtpGli~~a~~~~~L~~~fl~~~era 236 (416)
T 1udx_A 158 ADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSE-EERFTLADIPGIIEGASEGKGLGLEFLRHIART 236 (416)
T ss_dssp CSEEEECCGGGCHHHHHHHHCSSCCEECCCTTCSSCCEEEEEECSS-SCEEEEEECCCCCCCGGGSCCSCHHHHHHHTSS
T ss_pred CEEEEECCCCCcHHHHHHHHHcCCccccCcccceecceeeEEEecC-cceEEEEeccccccchhhhhhhhHHHHHHHHHH
Confidence 3589999999999999999998864333333333333445566653 35577899998632 11111 001234679
Q ss_pred cEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhCCcc
Q 014101 361 DIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLVMVL 428 (430)
Q Consensus 361 d~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g~~~ 428 (430)
+.++.++|++ ..++..+..|..++....... ...|.++|+||+|+... ...+...+.+++.++++
T Consensus 237 ~~lL~vvDls-~~~~~~ls~g~~el~~la~aL-~~~P~ILVlNKlDl~~~-~~~~~l~~~l~~~g~~v 301 (416)
T 1udx_A 237 RVLLYVLDAA-DEPLKTLETLRKEVGAYDPAL-LRRPSLVALNKVDLLEE-EAVKALADALAREGLAV 301 (416)
T ss_dssp SEEEEEEETT-SCHHHHHHHHHHHHHHHCHHH-HHSCEEEEEECCTTSCH-HHHHHHHHHHHTTTSCE
T ss_pred HhhhEEeCCc-cCCHHHHHHHHHHHHHHhHHh-hcCCEEEEEECCChhhH-HHHHHHHHHHHhcCCeE
Confidence 9999999998 677888888877766542100 14799999999999874 33344555555555554
No 336
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=99.10 E-value=1.6e-11 Score=117.82 Aligned_cols=115 Identities=17% Similarity=0.111 Sum_probs=91.2
Q ss_pred HHHHHHhCCCCC-CCcCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChh-hHHH
Q 014101 300 VLLNSFLGRPFS-DNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDES-SWKR 377 (430)
Q Consensus 300 SLi~~l~~~~~~-~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~-S~~~ 377 (430)
+|+.+++.+.|. ..+.||+|..+.. .+..+ + ...+||+ +++++.++ +.+++++|++|+|||++++. ++..
T Consensus 32 sl~~~~~~~~f~~~~~~pTiGd~~~~-~~~~~-~--~~~iwD~--qer~~~l~--~~~~~~ad~vilV~D~~~~~~s~~~ 103 (301)
T 1u0l_A 32 ERILCKLRGKFRLQNLKIYVGDRVEY-TPDET-G--SGVIENV--LHRKNLLT--KPHVANVDQVILVVTVKMPETSTYI 103 (301)
T ss_dssp CEEEEEECGGGTTTTCCCCTTCEEEE-ECCCS-S--SEEEEEE--CCCSCEET--TTTEESCCEEEEEECSSTTCCCHHH
T ss_pred cEEEEEEcccccccCCCCCCccEEEE-EEcCC-C--eEEEEEE--ccccceee--ccccccCCEEEEEEeCCCCCCCHHH
Confidence 689999999998 7888999965542 22222 2 6789999 88888888 78999999999999999987 7999
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHHHhC--Cccc
Q 014101 378 ATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFTFLV--MVLY 429 (430)
Q Consensus 378 ~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~~~g--~~~f 429 (430)
+..|+..+... ++|+++|+||+|+.+.+. .+++.++++.++ +++|
T Consensus 104 l~~~l~~~~~~------~~piilv~NK~DL~~~~~-v~~~~~~~~~~~~~~~~~ 150 (301)
T 1u0l_A 104 IDKFLVLAEKN------ELETVMVINKMDLYDEDD-LRKVRELEEIYSGLYPIV 150 (301)
T ss_dssp HHHHHHHHHHT------TCEEEEEECCGGGCCHHH-HHHHHHHHHHHTTTSCEE
T ss_pred HHHHHHHHHHC------CCCEEEEEeHHHcCCchh-HHHHHHHHHHHhhhCcEE
Confidence 99999887652 689999999999987432 255778888777 5554
No 337
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.09 E-value=4.2e-10 Score=98.69 Aligned_cols=105 Identities=12% Similarity=0.138 Sum_probs=79.0
Q ss_pred ccHHHHHHHH--------HHHHhhcCCCCCccCHHHHHHHHHHhcCC--------CCCHHHHHHHHHHHHhhhcCCccCC
Q 014101 51 LKPRCVRALK--------RIFILCDHDRDGALSDAELNDFQVKCFNS--------PLQPSEIVGVKRVVQEKLREGVNER 114 (430)
Q Consensus 51 lt~~~~~~l~--------~~F~~~D~d~dG~is~~El~~~~~~~~g~--------~~~~~e~~~i~~~~~~~~~~d~~~~ 114 (430)
++..+...|+ .+|+.+|.|+||.|+.+|+..++....+. ....+.+..+++.+ |.+++
T Consensus 46 ~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~d 119 (185)
T 2sas_A 46 LSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGM------DVSGD 119 (185)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHH------CTTSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHH------cCCCC
Confidence 3455555554 56999999999999999999887765433 22346777888888 78899
Q ss_pred C-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCC
Q 014101 115 G-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDN 193 (430)
Q Consensus 115 g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG 193 (430)
| |+++||..++. .+.. +. +.+.++|+.+|.|+||
T Consensus 120 G~Is~~E~~~~l~----------------------------------~~g~--------~~---~~~~~~~~~~D~d~dG 154 (185)
T 2sas_A 120 GIVDLEEFQNYCK----------------------------------NFQL--------QC---ADVPAVYNVITDGGKV 154 (185)
T ss_dssp SCCCHHHHHHHTT----------------------------------SSCC--------CC---SSHHHHHHHHHTTTTS
T ss_pred CeEcHHHHHHHHH----------------------------------HhCC--------CH---HHHHHHHHHhcCCCCC
Confidence 9 99999998742 0110 00 1257899999999999
Q ss_pred CCCHHHHHHhhcc
Q 014101 194 SLRPIEVEDLFST 206 (430)
Q Consensus 194 ~is~~el~~~~~~ 206 (430)
.|+.+||..++..
T Consensus 155 ~i~~~ef~~~~~~ 167 (185)
T 2sas_A 155 TFDLNRYKELYYR 167 (185)
T ss_dssp CCSHHHHHHHHHH
T ss_pred cCcHHHHHHHHHH
Confidence 9999999998864
No 338
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=99.09 E-value=6.8e-11 Score=113.46 Aligned_cols=138 Identities=15% Similarity=0.149 Sum_probs=73.1
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCC-CCCCCc--------CCCccceEEEEEEEcCCCeEEEEEEeCCCh-------hHH
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGR-PFSDNY--------TPTTDERYAVNVVDQPGGTKKTVVLREIPE-------EAV 347 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~-~~~~~~--------~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~-------e~~ 347 (430)
-.++|+|+|++|||||||++++.+. .++... .++............++....+.+||++|. +.+
T Consensus 17 ~~~~I~lvG~nG~GKSTLl~~L~g~~~~~~~gi~~~g~~~~~t~~~~~~~~~~q~~~~~~~ltv~Dt~g~~~~~~~~e~~ 96 (301)
T 2qnr_A 17 FEFTLMVVGESGLGKSTLINSLFLTDLYPERVISGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCF 96 (301)
T ss_dssp -CEEEEEEEETTSSHHHHHHHHHC------------------------CEEEEC---CCEEEEEEEEC-----------C
T ss_pred CCEEEEEECCCCCCHHHHHHHHhCCCccCCCCcccCCcccCCcceEeeEEEEecCCCcccCcchhhhhhhhhhcCcHHHH
Confidence 4589999999999999999998875 333222 122221111112222334567789999997 333
Q ss_pred Hhhhc-----cccccc-------------cccEEEEEEECCChhhHHHHH-HHHHHHHhcCCCCCCCCcEEEEEeCCCCC
Q 014101 348 AKLLS-----NKDSLA-------------ACDIAVFVHDSSDESSWKRAT-ELLVEVASYGEDTGFEVPCLIVAAKDDLD 408 (430)
Q Consensus 348 ~~~~~-----~~~~~~-------------~ad~vilv~D~t~~~S~~~~~-~~l~~l~~~~~~~~~~~PiilVgnK~Dl~ 408 (430)
..+.. ...+++ .+++++++.+.+. .+++.+. +++..+ . .+.|+++|+||.|+.
T Consensus 97 ~~l~~~l~~~~~~~~~~~sgg~rqrv~~ara~~ll~ldePt~-~~Ld~~~~~~l~~l---~----~~~~iilV~~K~Dl~ 168 (301)
T 2qnr_A 97 KTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFG-HGLKPLDVAFMKAI---H----NKVNIVPVIAKADTL 168 (301)
T ss_dssp TTHHHHHHHHHHHHHHHHTSSCCTTCCCCCCCEEEEEECSSS-SSCCHHHHHHHHHH---T----TTSCEEEEECCGGGS
T ss_pred HHHHHHHHHHHHHHHHHhCHHhhhhhhhhhhhheeeeecCcc-cCCCHHHHHHHHHH---H----hcCCEEEEEEeCCCC
Confidence 33220 002222 2334444444332 2344332 233333 1 157999999999998
Q ss_pred Ccc---CcHHHHHHHHHHhCCccc
Q 014101 409 SFA---MAIQDSTRVFTFLVMVLY 429 (430)
Q Consensus 409 ~~~---v~~~~~~~~~~~~g~~~f 429 (430)
..+ +..+++.++++.+++++|
T Consensus 169 ~~~e~~~~~~~~~~~~~~~~~~~~ 192 (301)
T 2qnr_A 169 TLKERERLKKRILDEIEEHNIKIY 192 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEE
Confidence 642 235788999999999876
No 339
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=99.08 E-value=9.1e-11 Score=92.56 Aligned_cols=70 Identities=17% Similarity=0.192 Sum_probs=60.4
Q ss_pred cHHHHHHHHHHHHhhc-CCCCC-ccCHHHHHHHHHHh----cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 52 KPRCVRALKRIFILCD-HDRDG-ALSDAELNDFQVKC----FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D-~d~dG-~is~~El~~~~~~~----~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
.+.++..|+++|+.|| +|+|| +|+.+||+.+++.. +|.+++++++..+++.+ |.+++| |+|+||+.+
T Consensus 7 ~e~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~------D~d~dG~I~f~EF~~~ 80 (95)
T 2wcb_A 7 LEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGL------DANQDEQVDFQEFISL 80 (95)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTS------SSSTTSEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHH------cCCCCCcCcHHHHHHH
Confidence 3556889999999999 89998 99999999998753 35678899999999887 788999 999999998
Q ss_pred HHH
Q 014101 125 HAL 127 (430)
Q Consensus 125 ~~~ 127 (430)
+..
T Consensus 81 ~~~ 83 (95)
T 2wcb_A 81 VAI 83 (95)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 340
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.07 E-value=3.5e-10 Score=105.69 Aligned_cols=112 Identities=13% Similarity=0.132 Sum_probs=84.0
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.++++|+.+|.|+||.|+.+|+..++... +.....+++..+++.+ |.+++| |+++||..++....
T Consensus 130 ~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~-~~~~~~~~l~~~F~~~------D~d~dG~I~~~Ef~~~l~~~~------- 195 (256)
T 2jul_A 130 YAHFLFNAFDADGNGAIHFEDFVVGLSIL-LRGTVHEKLKWAFNLY------DINKDGCITKEEMLAIMKSIY------- 195 (256)
T ss_dssp HHHHHHHHSSCSCCSEECSHHHHHHHHHH-HSCCHHHHHHHHHHHT------CCSSSSCBCHHHHHHHHHHHH-------
T ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHH-hccChHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHHHH-------
Confidence 46889999999999999999999997764 4556788888888888 788899 99999999865322
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
..+|.... | ... .....+.+.++|+.+|.|+||.|+.+||..++...
T Consensus 196 -----~~~g~~~~--------~--------~~~---~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~ 242 (256)
T 2jul_A 196 -----DMMGRHTY--------P--------ILR---EDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKD 242 (256)
T ss_dssp -----HHCCCCCS--------C--------CSC---CCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHC
T ss_pred -----HHhCCCCC--------c--------ccc---hhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhC
Confidence 11121100 0 000 01123457899999999999999999999998764
No 341
>4a9a_A Ribosome-interacting GTPase 1; DRG-DFRP complex, ribosome binding GTPase; 2.67A {Saccharomyces cerevisiae}
Probab=99.07 E-value=4.4e-10 Score=110.45 Aligned_cols=134 Identities=16% Similarity=0.112 Sum_probs=91.7
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCCeEEEEEEeCCChh--------HHHhhhccccc
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGGTKKTVVLREIPEE--------AVAKLLSNKDS 356 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e--------~~~~~~~~~~~ 356 (430)
..+|++||.||||||||+|++++........|..+.+.....+.+++ ..+.++|++|-- ..... ...
T Consensus 72 ~a~V~ivG~PNvGKSTL~n~Lt~~~~~v~~~pftT~~~~~g~~~~~~--~~i~l~D~pGl~~~a~~~~~~g~~~---l~~ 146 (376)
T 4a9a_A 72 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKG--AKIQMLDLPGIIDGAKDGRGRGKQV---IAV 146 (376)
T ss_dssp SEEEEEECCCCHHHHHHHHHHHSBCCCGGGTCSSCCCEEEEEEEETT--EEEEEEECGGGCCC-----CHHHHH---HHH
T ss_pred CCeEEEECCCCCCHHHHHHHHhCCCCcccCCCCceeeeeeEEEEeCC--cEEEEEeCCCccCCchhhhHHHHHH---HHH
Confidence 46899999999999999999999887666667777777777788874 567889998841 11222 256
Q ss_pred cccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc---------cCcHHHHHHHHHHhCC
Q 014101 357 LAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF---------AMAIQDSTRVFTFLVM 426 (430)
Q Consensus 357 ~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~---------~v~~~~~~~~~~~~g~ 426 (430)
++.||++++|+|++++.. .......++....... ...|.+++.||+|...- ....++...+...+.+
T Consensus 147 i~~ad~il~vvD~~~p~~--~~~~i~~EL~~~~~~l-~~k~~~i~~nK~d~~gi~i~~~~~~~~l~~eeik~il~~~~l 222 (376)
T 4a9a_A 147 ARTCNLLFIILDVNKPLH--HKQIIEKELEGVGIRL-NKTPPDILIKKKEKGGISITNTVPLTHLGNDEIRAVMSEYRI 222 (376)
T ss_dssp HHHCSEEEEEEETTSHHH--HHHHHHHHHHHTTEEE-TCCCCCEEEEECSSSCEEEEESSCCSSCCHHHHHHHHHHTTC
T ss_pred HHhcCccccccccCccHH--HHHHHHHHHHHhhHhh-ccCChhhhhhHhhhhhhhhhcchhhhhccHHHHHHHHHHhcc
Confidence 689999999999998633 2222333333322111 15688899999998542 1335566666555543
No 342
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.07 E-value=5e-10 Score=102.60 Aligned_cols=110 Identities=11% Similarity=0.102 Sum_probs=82.6
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.++++|+.+|.|+||.|+.+|+..++... +.....+++..+++.+ |.+++| |+++||..++....
T Consensus 90 ~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~-~~~~~~~~l~~~F~~~------D~d~dG~Is~~E~~~~l~~~~------- 155 (224)
T 1s1e_A 90 YAHYLFNAFDTTQTGSVKFEDFVTALSIL-LRGTVHEKLRWTFNLY------DINKDGYINKEEMMDIVKAIY------- 155 (224)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHH-HHCCHHHHHHHHHHHH------CTTCCSEECHHHHHHHHHHHH-------
T ss_pred HHHHHHHHhcCCCCCcEeHHHHHHHHHHH-ccCCHHHHHHHHHHHH------cCCCCCeECHHHHHHHHHHHH-------
Confidence 45789999999999999999999997765 3445778888888888 788999 99999998865321
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccC-HHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELT-NEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s-~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
..+|.... | .++ ....+.+.++|+.+|.|+||.|+.+||..++..
T Consensus 156 -----~~~g~~~~--------~------------~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~ 201 (224)
T 1s1e_A 156 -----DMMGKYTY--------P------------VLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQE 201 (224)
T ss_dssp -----HHHTTCCC--------G------------GGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHT
T ss_pred -----HHhcccCC--------C------------CCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 11121100 0 011 112345789999999999999999999999875
No 343
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=99.07 E-value=7e-10 Score=86.84 Aligned_cols=69 Identities=20% Similarity=0.309 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHhhcCCCCC---ccCHHHHHHHHHHh----cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 53 PRCVRALKRIFILCDHDRDG---ALSDAELNDFQVKC----FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG---~is~~El~~~~~~~----~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
+..+..|+++|+.|| |+|| +|+.+||+.+++.. +|.++++++++.+++.+ |.+++| |+|+||+.+
T Consensus 5 e~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~------D~d~dG~I~f~EF~~~ 77 (92)
T 3rm1_A 5 EKAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETL------DSNGDGECDFQEFMAF 77 (92)
T ss_dssp HHHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHH------CTTSSSSBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHH------cCCCCCCCcHHHHHHH
Confidence 456789999999999 8877 99999999998762 57788999999999999 788999 999999998
Q ss_pred HHHH
Q 014101 125 HALF 128 (430)
Q Consensus 125 ~~~~ 128 (430)
+...
T Consensus 78 ~~~l 81 (92)
T 3rm1_A 78 VAMI 81 (92)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7643
No 344
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.07 E-value=1.8e-10 Score=102.02 Aligned_cols=112 Identities=15% Similarity=0.213 Sum_probs=82.4
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.++++|+.+|.|+||.|+.+|+..++... +...+.+++..+++.+ |.+++| |+++||..++....
T Consensus 64 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~-~~~~~~~~~~~~f~~~------D~d~~G~i~~~e~~~~l~~~~------- 129 (190)
T 1g8i_A 64 FATFVFNVFDENKDGRIEFSEFIQALSVT-SRGTLDEKLRWAFKLY------DLDNDGYITRNEMLDIVDAIY------- 129 (190)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHHHH-HHCCHHHHHHHHHHHH------CTTCSSEEEHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHhcCCCCeEeHHHHHHHHHHh-cCCCHHHHHHHHHHhh------cCCCCCeECHHHHHHHHHHHH-------
Confidence 36789999999999999999999987664 4456788888888888 778899 99999999865321
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
+.+|..... + ... ....+.+.++|+.+|.|+||.|+.+||..++...
T Consensus 130 -----~~~g~~~~~-------~---------~~~---~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~ 176 (190)
T 1g8i_A 130 -----QMVGNTVEL-------P---------EEE---NTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD 176 (190)
T ss_dssp -----HHC-----C-------C---------GGG---SSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHC
T ss_pred -----HHhCCccCC-------c---------ccc---ccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhC
Confidence 111110000 0 000 1123457899999999999999999999998754
No 345
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=99.07 E-value=2.7e-10 Score=89.24 Aligned_cols=68 Identities=13% Similarity=0.239 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHhhc-CCCCC-ccCHHHHHHHHHHhcC--CCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 53 PRCVRALKRIFILCD-HDRDG-ALSDAELNDFQVKCFN--SPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~is~~El~~~~~~~~g--~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
++++..|+++|+.|| +|+|| .|+.+||..+++..++ . ++++++..+++.+ |.+++| |+|+||+.++..
T Consensus 6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~------D~d~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 6 EKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSL------DKNSDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHH------TTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHH
Confidence 456789999999999 99999 9999999999887544 4 7889999999998 678889 999999998764
No 346
>2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A
Probab=99.06 E-value=2e-10 Score=112.67 Aligned_cols=29 Identities=41% Similarity=0.606 Sum_probs=25.9
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCC
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFS 311 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~ 311 (430)
....+|+|+|.+|||||||+|+|++.++.
T Consensus 29 ~~~~~I~vvG~~~~GKSSLln~L~g~~~~ 57 (353)
T 2x2e_A 29 LDLPQIAVVGGQSAGKSSVLENFVGRDFL 57 (353)
T ss_dssp CCCCEEEEECBTTSSHHHHHHTTTTSCCS
T ss_pred CCCCeEEEECCCCCCHHHHHHHHhCCCcC
Confidence 34579999999999999999999998875
No 347
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=99.05 E-value=7.5e-10 Score=87.00 Aligned_cols=65 Identities=20% Similarity=0.358 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
..+.++++|+.||+|+||.|+.+||..+++. +|..+++++++.+++.+ |.+++| |+|+||+.++.
T Consensus 27 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~e~~~l~~~~------D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREA------DIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp CHHHHHHHHHHHCTTCCSCBCHHHHHHHHHH-HTCCCCHHHHHHHHHHH------CTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CCCCCCcEeHHHHHHHHh
Confidence 4568999999999999999999999999876 48889999999999998 678888 99999998754
No 348
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=99.05 E-value=1e-10 Score=89.27 Aligned_cols=71 Identities=21% Similarity=0.327 Sum_probs=59.4
Q ss_pred cHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcC--CCCCHHHHHH----HHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 52 KPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFN--SPLQPSEIVG----VKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g--~~~~~~e~~~----i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
++...+.++++|+.||+|+||.|+.+||..++... | .+++++++.. +++.+ |.+++| |+|+||+..
T Consensus 2 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~------D~~~dg~I~~~eF~~~ 74 (83)
T 1yx7_A 2 ACKVKAELEAAFKKLDANGDGYVTALELQTFMVTL-DAYKALSKDKVKEASAKLIKMA------DKNSDGKISKEEFLNA 74 (83)
T ss_dssp CSCSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHH-TTCTTTTTTTTHHHHHHHHTTT------CSSSCSCCSHHHHHHH
T ss_pred CccHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH-ccccCCCHHHHHHHHHHHHHHh------CCCCCCCCcHHHHHHh
Confidence 44556789999999999999999999999998765 6 7788999998 66666 678889 999999987
Q ss_pred HHHHH
Q 014101 125 HALFI 129 (430)
Q Consensus 125 ~~~~~ 129 (430)
+...+
T Consensus 75 ~~~~~ 79 (83)
T 1yx7_A 75 NAELL 79 (83)
T ss_dssp HHHHH
T ss_pred hHHHH
Confidence 65433
No 349
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.04 E-value=2.1e-10 Score=122.52 Aligned_cols=116 Identities=16% Similarity=0.124 Sum_probs=64.1
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.++.+|..+|.|+||.|+.+|+..++... +++..+++.+ |.+++| |+.+||..++..
T Consensus 576 ~~~~l~~~~D~d~~G~I~f~EF~~l~~~~-------~~l~~~F~~~------D~d~dG~Is~~El~~~L~~--------- 633 (714)
T 3bow_A 576 TCKIMVDMLDEDGSGKLGLKEFYILWTKI-------QKYQKIYREI------DVDRSGTMNSYEMRKALEE--------- 633 (714)
T ss_dssp HHHHHHHHHCCSSCSSBCHHHHHHHHHHH-------HHHHHHHHHH------CTTCCSSEEHHHHHHHHHH---------
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHH-------HHHHHHHHHh------CCCCCCeECHHHHHHHHHH---------
Confidence 45556666677777777777766665432 4555555555 555666 777777655321
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCCc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAP 216 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~~ 216 (430)
+|. .++. +.+..+|+.+| |+||.|+.+||..++.... ....
T Consensus 634 -------~G~------------------------~ls~---~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~~----~l~~ 674 (714)
T 3bow_A 634 -------AGF------------------------KLPC---QLHQVIVARFA-DDELIIDFDNFVRCLVRLE----ILFK 674 (714)
T ss_dssp -------TTE------------------------ECCH---HHHHHHHHHHS-CTTCEECHHHHHHHHHHHH----HHHH
T ss_pred -------cCC------------------------CCCH---HHHHHHHHHhC-CCCCeEcHHHHHHHHHHHH----HHHH
Confidence 110 0111 23456666666 6666666666666665321 0112
Q ss_pred ccccccccCCcccchhhH
Q 014101 217 YKDAAEKTALGGLSLDGF 234 (430)
Q Consensus 217 ~~~~~d~~~dg~i~~~ef 234 (430)
+.+.+|.|++|.|+++|+
T Consensus 675 ~F~~~D~d~dG~Is~~el 692 (714)
T 3bow_A 675 IFKQLDPENTGTIQLDLI 692 (714)
T ss_dssp HHSSSCSSCCSEEEEEHH
T ss_pred HHHHhCCCCCCcEEHHHH
Confidence 334566666666666654
No 350
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=99.04 E-value=1.5e-10 Score=92.01 Aligned_cols=66 Identities=12% Similarity=0.176 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHH
Q 014101 54 RCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALF 128 (430)
Q Consensus 54 ~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~ 128 (430)
++...++++|+.||+|+||+|+.+||..++++. | ++++++..|++.+ |.+++| |+|+||+.++...
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-~--l~~~~l~~i~~~~------D~d~dG~i~~~EF~~~~~~~ 74 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKS-G--LPDLILGKIWDLA------DTDGKGVLSKQEFFVALRLV 74 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTS-S--SCHHHHHHHHHHH------CCSSSSSCCSHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc-C--CCHHHHHHHHHHH------CCCCCCcCCHHHHHHHHHHH
Confidence 345689999999999999999999999997753 4 6799999999998 788889 9999999988754
No 351
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.04 E-value=6.7e-10 Score=96.69 Aligned_cols=101 Identities=12% Similarity=0.124 Sum_probs=78.1
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCC-------HHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQ-------PSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~-------~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
...++++|..+|.|+||.|+.+|+..++......... .+.+..+++.+ |.+++| |+++||..++..
T Consensus 57 ~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~I~~~e~~~~l~~ 130 (176)
T 1nya_A 57 GGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMC------DKNADGQINADEFAAWLTA 130 (176)
T ss_dssp HHHHHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHT------CSSCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHh------cCCCCCCCCHHHHHHHHHH
Confidence 3445599999999999999999999987766544332 24566677766 788999 999999987541
Q ss_pred HHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 128 FIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 128 ~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
+| ++ .+.+..+|+.+|.|+||.|+.+||..++...
T Consensus 131 ----------------~g--------------------------~~---~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 165 (176)
T 1nya_A 131 ----------------LG--------------------------MS---KAEAAEAFNQVDTNGNGELSLDELLTAVRDF 165 (176)
T ss_dssp ----------------TT--------------------------CC---HHHHHHHHHHHCTTCSSEEEHHHHHHHHSCC
T ss_pred ----------------hC--------------------------CC---HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 11 11 2347789999999999999999999999764
No 352
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=99.03 E-value=5.2e-10 Score=81.33 Aligned_cols=62 Identities=26% Similarity=0.394 Sum_probs=56.3
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
.++++|+.+|+|+||.|+.+||..++.. +|.+++.+++..+++.+ |.+++| |+|+||+.++.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~------D~~~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALA-FSPYFTQEDIVKFFEEI------DVDGNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHH-TCTTSCHHHHHHHHHHH------CCSSSSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHH------CCCCCCcCcHHHHHHHHH
Confidence 5789999999999999999999999776 58889999999999998 678889 99999998864
No 353
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.03 E-value=1e-10 Score=94.87 Aligned_cols=72 Identities=14% Similarity=0.226 Sum_probs=58.3
Q ss_pred cccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 170 VELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 170 ~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
..++++..+.++++|+.||+||||+|+.+||+.+|...+........+.+.+|.|+||.|+|+||+..+...
T Consensus 14 ~~ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~ 85 (110)
T 1iq3_A 14 WRITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp CCCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 345556677899999999999999999999999998754322334567789999999999999999986543
No 354
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=99.02 E-value=7.7e-10 Score=88.97 Aligned_cols=71 Identities=17% Similarity=0.263 Sum_probs=63.6
Q ss_pred cCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 48 SQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 48 ~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...| +.+...++++|..||+|+||.|+.+||..++.. .|.+++.+++..++..+ |.+++| |+|+||+.++.
T Consensus 24 ~~~l-~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~l~~~~------D~d~dg~i~~~eF~~~~~ 95 (107)
T 2d58_A 24 DEDL-PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEV------SSGSGETFSYPDFLRMML 95 (107)
T ss_dssp CTTH-HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHH-TTCCCCHHHHHHHHHHH------CSSSSSEECHHHHHHHHS
T ss_pred HHhh-HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CCCCCCeEcHHHHHHHHH
Confidence 4456 889999999999999999999999999999776 58899999999999998 678889 99999998853
No 355
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.02 E-value=2.2e-09 Score=91.29 Aligned_cols=105 Identities=12% Similarity=0.160 Sum_probs=79.5
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+.++|+.+|.|+||.|+.+|+..++..........+.+..+++.+ |.+++| |+.+||..++....
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~i~~~e~~~~l~~~~------- 105 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIY------DMDKDGYISNGELFQVLKMMV------- 105 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHH------CTTCSSCBCHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHHHh-------
Confidence 5778999999999999999999988765544445667788888888 778889 99999998865311
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCH-HHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTN-EAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
| ..++. +..+.+..+|+.+|.|+||.|+.+||..++...
T Consensus 106 --------~------------------------~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 145 (155)
T 3ll8_B 106 --------G------------------------NNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 145 (155)
T ss_dssp --------G------------------------GGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred --------c------------------------cCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 1 01111 222334556666999999999999999999864
No 356
>2dby_A GTP-binding protein; GDP, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: GDP; 1.76A {Thermus thermophilus} PDB: 2dwq_A
Probab=99.01 E-value=8.7e-10 Score=108.33 Aligned_cols=86 Identities=15% Similarity=0.014 Sum_probs=54.7
Q ss_pred eEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCC-------------------CeEEEEEEeCCChhH
Q 014101 286 FQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPG-------------------GTKKTVVLREIPEEA 346 (430)
Q Consensus 286 ~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~-------------------~~~~~~i~d~~G~e~ 346 (430)
++|+++|.+|||||||+|++++........|..+.......+.+++ ....+.+||++|...
T Consensus 2 ~~v~IVG~pnvGKSTL~n~L~~~~~~v~~~p~~Ti~pn~g~~~v~~~~l~~~~~~~~~~~~~~~~~~~~i~lvDtpGl~~ 81 (368)
T 2dby_A 2 LAVGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLEDERLYALQRTFAKGERVPPVVPTHVEFVDIAGLVK 81 (368)
T ss_dssp CSEEEECCSSSSHHHHHHHHHHHHTTCSSCCGGGGSTTEEEEECCCHHHHHHHHHHCBTTBCCCEECCEEEEEECCSCCC
T ss_pred cEEEEECCCCCCHHHHHHHHhCCCCcccCCCCceeccceeeEecChHHHHHHHHHhcccccccccCCceEEEEECCCccc
Confidence 5799999999999999999987653222223222222222333332 124578999999754
Q ss_pred HH----hhh-ccccccccccEEEEEEECCC
Q 014101 347 VA----KLL-SNKDSLAACDIAVFVHDSSD 371 (430)
Q Consensus 347 ~~----~~~-~~~~~~~~ad~vilv~D~t~ 371 (430)
.. .+. ....+++.+|++++|+|+++
T Consensus 82 ~a~~~~~lg~~fl~~ir~ad~ii~VvD~~~ 111 (368)
T 2dby_A 82 GAHKGEGLGNQFLAHIREVAAIAHVLRCFP 111 (368)
T ss_dssp CCCSSSCTTHHHHHHHHTCSEEEEEEECCC
T ss_pred cccccchHHHHHHHHHHhCCEEEEEEECCC
Confidence 31 111 01245789999999999985
No 357
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=99.01 E-value=9.7e-10 Score=85.71 Aligned_cols=69 Identities=19% Similarity=0.290 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHhhc-CCCCC-ccCHHHHHHHHHHh----cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 53 PRCVRALKRIFILCD-HDRDG-ALSDAELNDFQVKC----FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~is~~El~~~~~~~----~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
+.++..++++|+.|| +|+|| .|+.+||..++... +|.+++++++..+++.+ |.+++| |+|+||+.++
T Consensus 5 ~~~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~------D~d~dg~i~~~eF~~~~ 78 (93)
T 1k2h_A 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKEL------DENGDGEVDFQEFVVLV 78 (93)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHH------HHCTTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHh------CCCCCCcCcHHHHHHHH
Confidence 456789999999999 79999 99999999998762 57889999999999998 567888 9999999987
Q ss_pred HH
Q 014101 126 AL 127 (430)
Q Consensus 126 ~~ 127 (430)
..
T Consensus 79 ~~ 80 (93)
T 1k2h_A 79 AA 80 (93)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 358
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.01 E-value=1.3e-09 Score=100.15 Aligned_cols=110 Identities=15% Similarity=0.118 Sum_probs=79.5
Q ss_pred HHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhH
Q 014101 59 LKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETT 137 (430)
Q Consensus 59 l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~ 137 (430)
++++|+.+|.|+||.|+.+|+..++... +....++.+..+++.+ |.+++| |+++||..++.....
T Consensus 104 ~~~lf~~~D~d~~G~I~~~Ef~~~l~~~-~~~~~~~~l~~~F~~~------D~d~dG~Is~~E~~~~l~~~~~------- 169 (229)
T 3dd4_A 104 AHFLFNAFDTDHNGAVSFEDFIKGLSIL-LRGTVQEKLNWAFNLY------DINKDGYITKEEMLDIMKAIYD------- 169 (229)
T ss_dssp HHHHHHTTCSSCCSSCCHHHHHHHHHHH-HHSCHHHHHHHHHHHH------CTTCSSCCBHHHHHHHHHHHHH-------
T ss_pred HHHHHHHcCCCCCCeEeHHHHHHHHHHH-cCCChHHHHHHHHHHh------CCCCCCeECHHHHHHHHHHHHH-------
Confidence 4689999999999999999999987654 3445677888888888 788999 999999998653221
Q ss_pred HHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 138 WTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 138 w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
..+......+. ... ..+.+..+|+.+|.|+||.||.+||.+++..
T Consensus 170 -----~~~~~~~~~~~----------------~~~---~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~ 214 (229)
T 3dd4_A 170 -----MMGKCTYPVLK----------------EDA---PRQHVETFFQKMDKNKDGVVTIDEFIESCQK 214 (229)
T ss_dssp -----HCC------------------------------CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHT
T ss_pred -----HhccccCCCcc----------------hhh---HHHHHHHHHHHhcCCCCCcEeHHHHHHHHHh
Confidence 11110000000 001 1123678999999999999999999999875
No 359
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.00 E-value=8.1e-11 Score=92.84 Aligned_cols=69 Identities=22% Similarity=0.168 Sum_probs=55.8
Q ss_pred cCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhhh
Q 014101 172 LTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 172 ~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
++++..+.++++|+.||+||||+|+.+||+.+|...+........+.+.+|.|+||.|+|+||+..+..
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 72 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 345567789999999999999999999999999876422122345678899999999999999988654
No 360
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=99.00 E-value=4.4e-10 Score=88.03 Aligned_cols=69 Identities=10% Similarity=0.117 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHhhcC-CCCC-ccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 53 PRCVRALKRIFILCDH-DRDG-ALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D~-d~dG-~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
+..+..|+++|+.||+ |+|| .|+.+||..++.+.+|..++..++..+++.+ |.+++| |+|+||+.++..
T Consensus 6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~------D~d~dG~I~~~EF~~~~~~ 77 (93)
T 1xk4_A 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKEL------DINTDGAVNFQEFLILVIK 77 (93)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHH------CTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHh------CCCCCCCCcHHHHHHHHHH
Confidence 4567799999999999 9999 9999999999855567667778889999988 778889 999999998753
No 361
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=98.98 E-value=4.2e-10 Score=89.63 Aligned_cols=68 Identities=15% Similarity=0.168 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHh----cCC--CCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 53 PRCVRALKRIFILCDHDRDGALSDAELNDFQVKC----FNS--PLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~----~g~--~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
++++..|+++|+.||.| ||+|+.+||+.+++.. +|. .+++++++.+++.+ |.+++| |+|+||+.++
T Consensus 6 ~~~~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~------D~d~dG~I~f~EF~~~~ 78 (100)
T 1psr_A 6 ERSIIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKK------DKNEDKKIDFSEFLSLL 78 (100)
T ss_dssp HHHHHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHH------CTTCSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHh------CCCCCCcCcHHHHHHHH
Confidence 46788999999999987 8999999999998763 344 57888999999998 788899 9999999987
Q ss_pred HH
Q 014101 126 AL 127 (430)
Q Consensus 126 ~~ 127 (430)
..
T Consensus 79 ~~ 80 (100)
T 1psr_A 79 GD 80 (100)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 362
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=98.98 E-value=7.6e-11 Score=93.93 Aligned_cols=65 Identities=12% Similarity=0.189 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhc-CCCC-CCCCHHHHHHhhcc-CCC---CC---CCCCcccccccccCCcccchhhHHhhhh
Q 014101 175 EAIDFLKGIFELFD-ADDD-NSLRPIEVEDLFST-APE---CP---WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 175 ~~~~~l~~~F~~fD-~d~d-G~is~~el~~~~~~-~~~---~~---~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+...|+++|+.|| +||| |+||.+||+.++.. .+. .+ ...+.+++++|.|+||.|+|+||+....
T Consensus 7 ~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~ 80 (101)
T 3nso_A 7 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLA 80 (101)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 35567999999997 9998 99999999999975 331 12 2234688999999999999999998743
No 363
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=98.98 E-value=6.5e-10 Score=93.52 Aligned_cols=67 Identities=18% Similarity=0.230 Sum_probs=59.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHH
Q 014101 52 KPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALF 128 (430)
Q Consensus 52 t~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~ 128 (430)
+++++..++++|+.|| |+||+|+.+||+.++++ .| ++.+++..|++.+ |.+++| |+|+||+.+|...
T Consensus 46 ~~~e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~-~g--l~~~el~~I~~~~------D~d~dG~Ld~~EF~~am~li 113 (139)
T 2jq6_A 46 VGKDKPTYDEIFYTLS-PVNGKITGANAKKEMVK-SK--LPNTVLGKIWKLA------DVDKDGLLDDEEFALANHLI 113 (139)
T ss_dssp GGGTHHHHHHHHHHSC-CSSSEEEHHHHHHHHHH-TT--CCHHHHHHHHHHH------CSSCCSEEEHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhC-CCCCeECHHHHHHHHHH-hC--cCHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHHH
Confidence 4567899999999999 99999999999999887 35 7899999999998 788999 9999999987643
No 364
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.98 E-value=1.6e-10 Score=124.34 Aligned_cols=132 Identities=12% Similarity=0.091 Sum_probs=98.4
Q ss_pred HHHHHHHHHh--hcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhh-hcCCccCCC-cCHHhHHHHHHHHHHc
Q 014101 56 VRALKRIFIL--CDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEK-LREGVNERG-LTLAGFLFLHALFIEK 131 (430)
Q Consensus 56 ~~~l~~~F~~--~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~-~~~d~~~~g-i~~~eFl~~~~~~~~~ 131 (430)
...|+++|+. +|+|+||.|+.+||..++.. ..+++..+++.++.+ ...|..++| |+|+||+.+++...
T Consensus 149 ~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~------~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~-- 220 (885)
T 3ohm_B 149 NTFLRKAYTKLKLQVNQDGRIPVKNILKMFSA------DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLC-- 220 (885)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG------GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHhcCccCCCCccCHHHHHHHHhc------CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcC--
Confidence 4678999998 89999999999999876442 456777777776432 112334677 99999999876311
Q ss_pred CCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC
Q 014101 132 GRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP 211 (430)
Q Consensus 132 ~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~ 211 (430)
+ .++++++|+.||.|++|+||.+||+..+......+
T Consensus 221 --------------------------~------------------R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~ 256 (885)
T 3ohm_B 221 --------------------------L------------------RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDP 256 (885)
T ss_dssp --------------------------C------------------CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCT
T ss_pred --------------------------C------------------HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcc
Confidence 0 13488999999999999999999999998643221
Q ss_pred ---------CC---CCccccccccc----CCcccchhhHHhhhh
Q 014101 212 ---------WD---EAPYKDAAEKT----ALGGLSLDGFLSEWA 239 (430)
Q Consensus 212 ---------~~---~~~~~~~~d~~----~dg~i~~~ef~~~w~ 239 (430)
.+ +..+++.++.+ ++|.|++++|.....
T Consensus 257 ~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~ 300 (885)
T 3ohm_B 257 RLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLG 300 (885)
T ss_dssp TSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHT
T ss_pred cccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhcc
Confidence 11 23567778887 789999999987743
No 365
>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling PR; HET: GDP; 2.00A {Mus musculus} SCOP: a.66.1.1 c.37.1.8 PDB: 3ab3_A* 3cx8_A* 3cx7_A* 3cx6_A* 1zca_A*
Probab=98.98 E-value=1.2e-09 Score=107.20 Aligned_cols=120 Identities=12% Similarity=0.092 Sum_probs=85.8
Q ss_pred CCCCHHHH--HHHHhCCCCCCC-------cCCCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEE
Q 014101 294 KKAGKSVL--LNSFLGRPFSDN-------YTPTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAV 364 (430)
Q Consensus 294 ~~vGKSSL--i~~l~~~~~~~~-------~~~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vi 364 (430)
+.+.|--| +.|+....+.++ ..+|+|... ..+.+. ...+.+||++|++.++..+ ..++++++++|
T Consensus 156 ~ds~~yfl~~~~ri~~~~Y~PT~~Dil~~r~~T~Gi~~--~~~~~~--~~~l~i~Dt~Gq~~~r~~w--~~~f~~~~~iI 229 (362)
T 1zcb_A 156 GESVKYFLDNLDKLGVPDYIPSQQDILLARRPTKGIHE--YDFEIK--NVPFKMVDVGGQRSERKRW--FECFDSVTSIL 229 (362)
T ss_dssp CTTHHHHHTTHHHHTSTTCCCCHHHHHHCCCCCSSEEE--EEEEET--TEEEEEEEECC-------C--TTSCTTCCEEE
T ss_pred cccHHHHHHHHHHHhcCCCCCChhhhhhccCCccceEE--EEeeeC--CeEEEEEeccchhhhhhhH--HHHhCCCCEEE
Confidence 34556555 777777766654 235666544 445555 4778899999999999999 78999999999
Q ss_pred EEEECCC----------hhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-----------------cCcHHHH
Q 014101 365 FVHDSSD----------ESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-----------------AMAIQDS 417 (430)
Q Consensus 365 lv~D~t~----------~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-----------------~v~~~~~ 417 (430)
+|||+++ .+++.+...|+..+...... .++|+|||+||+|+..+ .++.+++
T Consensus 230 fv~dls~~dq~l~ed~~~n~~~es~~~~~~i~~~~~~--~~~piILv~NK~DL~~~ki~~~~l~~~fp~y~g~~~~~~e~ 307 (362)
T 1zcb_A 230 FLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVF--SNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDV 307 (362)
T ss_dssp EEEETTCTTCEETTEEEEEHHHHHHHHHHHHHTCGGG--TTSEEEEEEECHHHHHHHTTTCCGGGTCTTCCSCTTCHHHH
T ss_pred EEEECccccccccccccccHHHHHHHHHHHHhcchhh--CCCCEEEEEEChhhhhhhccccchhhcCccccCCCCCHHHH
Confidence 9999999 78999999999998875322 27999999999999642 2667888
Q ss_pred HHHH
Q 014101 418 TRVF 421 (430)
Q Consensus 418 ~~~~ 421 (430)
.+|+
T Consensus 308 ~~~~ 311 (362)
T 1zcb_A 308 QKFL 311 (362)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8877
No 366
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=98.97 E-value=1.6e-09 Score=95.96 Aligned_cols=96 Identities=8% Similarity=0.119 Sum_probs=72.8
Q ss_pred HHHHHhhcCCCCCccCHHHHHHHHHHhcC--------CCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHH
Q 014101 60 KRIFILCDHDRDGALSDAELNDFQVKCFN--------SPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIE 130 (430)
Q Consensus 60 ~~~F~~~D~d~dG~is~~El~~~~~~~~g--------~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~ 130 (430)
..+|+.+|.|+||.|+.+|+..++..... .....+.+..+++.+ |.+++| |+++||..++..
T Consensus 67 ~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~dG~I~~~E~~~~l~~--- 137 (191)
T 2ccm_A 67 DGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVN------DTSGDNIIDKHEYSTVYMS--- 137 (191)
T ss_dssp HHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH------CTTCSSBCCHHHHHHHHHT---
T ss_pred HHHHHhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHH---
Confidence 45559999999999999999988766432 112245667777777 788999 999999987531
Q ss_pred cCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 131 KGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 131 ~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
+| ++ .+.+..+|+.+|.|+||.|+.+||..++..
T Consensus 138 -------------~g--------------------------~~---~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~ 171 (191)
T 2ccm_A 138 -------------YG--------------------------IP---KSDCDAAFDTLSDGGKTMVTREIFARLWTE 171 (191)
T ss_dssp -------------TT--------------------------CC---HHHHHHHHHHHTTTTTSCCBHHHHHHHHHH
T ss_pred -------------hC--------------------------CC---HHHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence 00 11 134678999999999999999999998864
No 367
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=98.97 E-value=3e-09 Score=94.76 Aligned_cols=101 Identities=17% Similarity=0.203 Sum_probs=78.3
Q ss_pred HHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhH
Q 014101 59 LKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETT 137 (430)
Q Consensus 59 l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~ 137 (430)
+.++|+.+|.|+||.|+.+|+..++.... ....+.+..+++.+ |.+++| |+.+||..++..
T Consensus 89 ~~~l~~~~D~d~~g~i~~~EF~~~~~~~~--~~~~~~l~~~F~~~------D~d~~G~Is~~El~~~l~~---------- 150 (191)
T 3k21_A 89 FDLLLDQIDSDGSGKIDYTEFIAAALDRK--QLSKKLIYCAFRVF------DVDNDGEITTAELAHILYN---------- 150 (191)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHSCGG--GCCHHHHHHHHHHH------STTCSSCBCHHHHHHHHHH----------
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHHhhh--hccHHHHHHHHHHh------CCCCCCcCCHHHHHHHHHh----------
Confidence 46789999999999999999988754322 35678888888888 788899 999999987541
Q ss_pred HHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 138 WTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 138 w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
.+ ....+++...+.+.++|+.+|.|+||.|+.+||..+++
T Consensus 151 ------~~----------------------~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 151 ------GN----------------------KKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp ------SS----------------------SCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred ------cC----------------------CCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 00 00123343445688999999999999999999999875
No 368
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=98.97 E-value=9.9e-10 Score=86.73 Aligned_cols=69 Identities=14% Similarity=0.194 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHh----cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 53 PRCVRALKRIFILCDHDRDGALSDAELNDFQVKC----FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~----~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
+.++..|+++|+.||. +||+|+.+||..+++.. +|.+++++++..+++.+ |.+++| |+|+||+.++..
T Consensus 5 ~~~~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~------D~d~dG~I~f~EF~~~~~~ 77 (96)
T 1a4p_A 5 EHAMETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDL------DQCRDGKVGFQSFFSLIAG 77 (96)
T ss_dssp HHHHHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHH------CTTSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHH
Confidence 4568899999999994 67899999999998763 35577899999999998 788899 999999998764
Q ss_pred H
Q 014101 128 F 128 (430)
Q Consensus 128 ~ 128 (430)
.
T Consensus 78 ~ 78 (96)
T 1a4p_A 78 L 78 (96)
T ss_dssp H
T ss_pred H
Confidence 3
No 369
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=98.97 E-value=1.4e-09 Score=81.79 Aligned_cols=62 Identities=21% Similarity=0.337 Sum_probs=56.1
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
+.++++|+.||+|+||.|+.+||..++..+ | +++++++..+++.+ |.+++| |+|+||+.++.
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~-g-~~~~~~~~~~~~~~------D~~~dg~i~~~ef~~~~~ 65 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTL-G-STSADEVQRMMAEI------DTDGDGFIDFNEFISFCN 65 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHH-H-TCCHHHHHHHHHHH------CTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-C-CCCHHHHHHHHHHh------CCCCCCeEcHHHHHHHHH
Confidence 468999999999999999999999998876 5 89999999999998 678888 99999999865
No 370
>2xtz_A Guanine nucleotide-binding protein alpha-1 subuni; hydrolase, G-protein signaling, SELF-activation, RAS-like DO; HET: GSP; 2.34A {Arabidopsis thaliana}
Probab=98.97 E-value=1.1e-09 Score=107.14 Aligned_cols=111 Identities=11% Similarity=-0.001 Sum_probs=79.0
Q ss_pred CCCCHHHH--HHHHhCCCCCCCc-------CCCccceEEEEEEEcCC----CeEEEEEEeCCChhHHHhhhccccccccc
Q 014101 294 KKAGKSVL--LNSFLGRPFSDNY-------TPTTDERYAVNVVDQPG----GTKKTVVLREIPEEAVAKLLSNKDSLAAC 360 (430)
Q Consensus 294 ~~vGKSSL--i~~l~~~~~~~~~-------~~t~~~~~~~~~v~~~~----~~~~~~i~d~~G~e~~~~~~~~~~~~~~a 360 (430)
+.+.|.-| +.|+....+.++. .+|.|.. ...+.+++ ....+.+||++|++.++.++ ..+++++
T Consensus 132 ~d~~~yfl~~~~ri~~~~Y~PT~~D~~~~r~~T~Gi~--e~~f~~~~~~~~~~v~l~iwDtaGQe~~r~~~--~~y~~~~ 207 (354)
T 2xtz_A 132 PDCTKYLMENLKRLSDINYIPTKEDVLYARVRTTGVV--EIQFSPVGENKKSGEVYRLFDVGGQRNERRKW--IHLFEGV 207 (354)
T ss_dssp CTTHHHHHTSHHHHHSTTCCCCHHHHHHCCCCCCSEE--EEEECCCCE------EEEEEEECCSTTGGGGT--GGGCTTE
T ss_pred hccHHHHHHHHHHHhcCCCCCCchheeeeccccccee--eEEEEeccCccccceeeEEEECCCchhhhHHH--HHHhCCC
Confidence 34445444 5566555544322 1333332 23344554 46788999999999999999 8999999
Q ss_pred cEEEEEEECC----------ChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 361 DIAVFVHDSS----------DESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 361 d~vilv~D~t----------~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
+++|+|||++ +.++|++...|+..+...... .++|+||||||+|+..+
T Consensus 208 ~~iI~v~dis~ydq~l~e~~~~~s~~~~~~~~~~i~~~~~~--~~~piiLvgNK~DL~~~ 265 (354)
T 2xtz_A 208 TAVIFCAAISEYDQTLFEDEQKNRMMETKELFDWVLKQPCF--EKTSFMLFLNKFDIFEK 265 (354)
T ss_dssp EEEEEEEEGGGTTCBCSSCTTSBHHHHHHHHHHHHHTCGGG--SSCEEEEEEECHHHHHH
T ss_pred CEEEEEEECcccccccccccchhHHHHHHHHHHHHHhcccc--CCCeEEEEEECcchhhh
Confidence 9999999998 789999999999998875322 27999999999998543
No 371
>1azs_C GS-alpha; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Bos taurus} SCOP: a.66.1.1 c.37.1.8 PDB: 1azt_A* 3c14_C* 3c15_C* 3c16_C* 1cjt_C* 1cjk_C* 1cju_C* 1cjv_C* 1tl7_C* 1cs4_C* 1u0h_C* 2gvd_C* 2gvz_C* 3e8a_C* 3g82_C* 3maa_C* 1cul_C* 3sn6_A*
Probab=98.97 E-value=2e-09 Score=106.57 Aligned_cols=87 Identities=11% Similarity=0.016 Sum_probs=72.6
Q ss_pred CCccceEEEEEEEcCCCeEEEEEEeCCChhHHHhhhccccccccccEEEEEEECCC----------hhhHHHHHHHHHHH
Q 014101 316 PTTDERYAVNVVDQPGGTKKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSD----------ESSWKRATELLVEV 385 (430)
Q Consensus 316 ~t~~~~~~~~~v~~~~~~~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~----------~~S~~~~~~~l~~l 385 (430)
+|+|... ..+.+. ...+.+||++|++.++.++ ..++++++++|+|||+++ .++|.++..|+..+
T Consensus 203 ~TiGi~~--~~~~~~--~v~l~iwDtaGQe~~r~~w--~~yf~~a~~iIfV~dis~ydq~l~ed~~~ns~~e~~~~~~~i 276 (402)
T 1azs_C 203 LTSGIFE--TKFQVD--KVNFHMFDVGGQRDERRKW--IQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSI 276 (402)
T ss_dssp CCCSEEE--EEEEET--TEEEEEEEECCSGGGGGGG--GGGTTTCCEEEEEEETTGGGCBCTTTSCSBHHHHHHHHHHHH
T ss_pred ceeeeEE--EEeecC--Cccceecccchhhhhhhhh--HhhccCCCEEEEEEECcccccccccccccchHHHHHHHHHHH
Confidence 4666554 455555 3788999999999999999 899999999999999999 89999999999999
Q ss_pred HhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 386 ASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 386 ~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
...... .++|+||||||+|+...
T Consensus 277 ~~~~~~--~~~piiLvgNK~DL~~~ 299 (402)
T 1azs_C 277 WNNRWL--RTISVILFLNKQDLLAE 299 (402)
T ss_dssp HTCTTC--SSCCEEEEEECHHHHHH
T ss_pred HhcccC--CCCeEEEEEEChhhhhh
Confidence 875322 37999999999998553
No 372
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=98.96 E-value=9.8e-10 Score=95.14 Aligned_cols=102 Identities=19% Similarity=0.253 Sum_probs=77.3
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
..+.++|..+|.|+||.|+.+|+..++....+.....+.+..+++.+ |.+++| |+.+||..++..
T Consensus 64 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~i~~~el~~~l~~-------- 129 (169)
T 3qrx_A 64 EEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLF------DDDNSGTITIKDLRRVAKE-------- 129 (169)
T ss_dssp HHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CTTCSSSBCHHHHHHHHHH--------
T ss_pred HHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHh------CCCCCCcCCHHHHHHHHHH--------
Confidence 35778899999999999999999988765443333455677777777 678899 999999887541
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
+| ..++ .+.+..+|+.+|.|+||.|+.+||..++...
T Consensus 130 --------~g------------------------~~~~---~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 166 (169)
T 3qrx_A 130 --------LG------------------------ENLT---EEELQEMIAEADRNDDNEIDEDEFIRIMKKT 166 (169)
T ss_dssp --------TT------------------------CCCC---HHHHHHHHHHHCCSSSSCBCHHHHHHHHC--
T ss_pred --------cC------------------------CCCC---HHHHHHHHHHhCCCCCCCEeHHHHHHHHHhc
Confidence 11 0111 2347789999999999999999999999754
No 373
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=98.96 E-value=1.3e-09 Score=93.79 Aligned_cols=97 Identities=19% Similarity=0.227 Sum_probs=72.9
Q ss_pred HHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCC------HHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHc
Q 014101 59 LKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQ------PSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEK 131 (430)
Q Consensus 59 l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~------~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~ 131 (430)
++++|..+|.|+||.|+.+|+..++......+.. .+.+..+++.+ |.+++| |+++||..++..
T Consensus 57 ~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~i~~~E~~~~l~~---- 126 (166)
T 3akb_A 57 WQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVA------DTDGDGAVTVADTARALTA---- 126 (166)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHH------CSSSSSCCBHHHHHHHHHH----
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHh------CCCCCCcCCHHHHHHHHHH----
Confidence 3588999999999999999999886654322100 22366666666 788899 999999887541
Q ss_pred CCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 132 GRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 132 ~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
+| ++ .+.+..+|+.+|.|+||.|+.+||..++..
T Consensus 127 ------------~~--------------------------~~---~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 160 (166)
T 3akb_A 127 ------------FG--------------------------VP---EDLARQAAAALDTDGDGKVGETEIVPAFAR 160 (166)
T ss_dssp ------------TT--------------------------CC---HHHHHHHHHHHCTTCSSBCCHHHHHHHHHH
T ss_pred ------------hC--------------------------CC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 00 11 234778999999999999999999998864
No 374
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=98.96 E-value=1.3e-10 Score=98.83 Aligned_cols=60 Identities=17% Similarity=0.194 Sum_probs=37.5
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHhhccCCC-------CCCCC---Cccc----ccccccCCcccchhhHHhhh
Q 014101 179 FLKGIFELFDADDDNSLRPIEVEDLFSTAPE-------CPWDE---APYK----DAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 179 ~l~~~F~~fD~d~dG~is~~el~~~~~~~~~-------~~~~~---~~~~----~~~d~~~dg~i~~~ef~~~w 238 (430)
.++.+|+.||+|+||+|+.+||+.++..... .+... ..++ +.+|.|+||.|+|+||+..+
T Consensus 69 ~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 69 LQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred HHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 3667888888888888888888887765421 11111 1222 66788888888888887653
No 375
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=98.96 E-value=8.1e-10 Score=88.84 Aligned_cols=65 Identities=18% Similarity=0.296 Sum_probs=58.8
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc--CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCF--NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~--g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
....++++|+.||+|+||.|+.+||..++..+. |.++++++++.+++.+ |.+++| |+|+||+.++
T Consensus 40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~------D~~~dg~i~~~eF~~~~ 107 (109)
T 1bu3_A 40 SADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAG------DSDGDGAIGVDEWAALV 107 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHH------CTTCSSEECHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHh------CCCCCCcEeHHHHHHHH
Confidence 466899999999999999999999999988764 8889999999999998 678889 9999999875
No 376
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=98.95 E-value=4.9e-10 Score=82.51 Aligned_cols=63 Identities=24% Similarity=0.376 Sum_probs=56.7
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
...++++|+.||+|+||.|+.+||..++.. +|.+++.+++..+++.+ |.+++| |+|+||+.++
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~------d~~~~g~i~~~eF~~~~ 68 (71)
T 2b1u_A 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAG-LGQPLPQEELDAMIREA------DVDQDGRVNYEEFARML 68 (71)
T ss_dssp HHHHHHHHTTSCCSSSSEEEHHHHHHHGGG-TTCSSCHHHHHHHHHHC------CSSSSSEEETTHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CCCCCCcCcHHHHHHHH
Confidence 568999999999999999999999999765 58889999999999988 678889 9999999875
No 377
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=98.95 E-value=1e-09 Score=88.10 Aligned_cols=66 Identities=20% Similarity=0.289 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc--CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCF--NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~--g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
....++++|+.||+|+||+|+.+||..++..+. |.++++++++.+++.+ |.+++| |+|+||+.++.
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~------D~~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 39 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAG------DKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp CHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHH------CTTCSSSEEHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH------CCCCCCcCCHHHHHHHHH
Confidence 456899999999999999999999999988764 7889999999999998 677888 99999998754
No 378
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=98.95 E-value=2.9e-09 Score=91.02 Aligned_cols=100 Identities=12% Similarity=0.142 Sum_probs=80.1
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCC----CCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcC
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSP----LQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKG 132 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~----~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~ 132 (430)
.+.++|+.+|.|+||.|+.+|+..++....... .....+..+++.+ |.+++| |+.+||..++..
T Consensus 51 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~I~~~el~~~l~~----- 119 (158)
T 2jnf_A 51 TIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLY------DKEGNGYISTDVMREILAE----- 119 (158)
T ss_dssp HHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHH------CSSSSSSEEHHHHHHHHHH-----
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHHHHHHHHHh------CCCCCCeEcHHHHHHHHHH-----
Confidence 567899999999999999999999887665443 5567788888888 788999 999999887542
Q ss_pred CchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 133 RLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 133 ~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
+|. .++ .+.+..+|+.+|.|+||.|+.+||..++..
T Consensus 120 -----------~g~------------------------~~~---~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 155 (158)
T 2jnf_A 120 -----------LDE------------------------TLS---SEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155 (158)
T ss_dssp -----------HCT------------------------TCC---HHHHHHHHHHHCSSCCSEECSHHHHHHTSS
T ss_pred -----------hCC------------------------cCC---HHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 110 011 234678999999999999999999999865
No 379
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=98.95 E-value=7.6e-10 Score=88.83 Aligned_cols=66 Identities=18% Similarity=0.272 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc--CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCF--NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~--g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
....++++|+.||+|+||+|+.+||..++..+. |.+++++++..+++.+ |.+++| |+|+||+.++.
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~------D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADG------DKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHH------CTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHh------CCCCCCcEeHHHHHHHHh
Confidence 456899999999999999999999999977653 7889999999999998 678888 99999998753
No 380
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=98.95 E-value=7.6e-10 Score=89.07 Aligned_cols=66 Identities=18% Similarity=0.250 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc--CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCF--NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~--g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
....++++|+.||+|+||+|+.+||..++..+. |.+++++++..+++.+ |.+++| |+|+||+.++.
T Consensus 40 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~------d~~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 40 SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAA------DKDGDGKIGIDEFETLVH 108 (110)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHH------CTTCSSSBCHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHh------CCCCCCeEcHHHHHHHHH
Confidence 467899999999999999999999999977653 7889999999999998 677888 99999998753
No 381
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=98.95 E-value=1.7e-09 Score=86.86 Aligned_cols=66 Identities=18% Similarity=0.246 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc--CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCF--NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~--g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
....++++|+.||+|+||.|+.+||..++..+. |.++++++++.+++.+ |.+++| |+|+||+.+++
T Consensus 39 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~------D~~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 39 TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAG------DSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp CHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHH------CTTCSSSEEHHHHHHHHH
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHh------CCCCCCcCcHHHHHHHHH
Confidence 356899999999999999999999999987653 8899999999999998 678888 99999999864
No 382
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=98.95 E-value=1.8e-10 Score=93.61 Aligned_cols=73 Identities=11% Similarity=0.095 Sum_probs=57.6
Q ss_pred ccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 169 SVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 169 ~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
...++.+..+.++++|+.||+||||+|+.+||+.++............+++.+|.|+||.|+|+||+..+...
T Consensus 5 ~w~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~ 77 (111)
T 2kgr_A 5 EWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLI 77 (111)
T ss_dssp CSSSCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 3456677778899999999999999999999999998422111223456788999999999999999886543
No 383
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=98.94 E-value=6.8e-10 Score=95.52 Aligned_cols=62 Identities=18% Similarity=0.296 Sum_probs=55.7
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
..|+++|+.||+|++|+|+.+||+.++.. +|.++++++++.|++.+ |.+ +| |+|+||+.+|.
T Consensus 85 ~~l~~aF~~fD~d~~G~I~~~el~~~l~~-~g~~ls~~ei~~~~~~~------D~~-dG~I~y~EF~~~m~ 147 (153)
T 3i5g_B 85 DALRNAFSMFDEDGQGFIPEDYLKDLLEN-MGDNFSKEEIKNVWKDA------PLK-NKQFNYNKMVDIKG 147 (153)
T ss_dssp HHHHHHHHTTCSSCSSCCCHHHHHHHHHS-SSSCCCHHHHHHHHTTC------CEE-TTEECHHHHHHHHH
T ss_pred HHHHHHHhccccCCCCeEeHHHHHHHHHH-cCCcCCHHHHHHHHHHh------CCC-cCEEcHHHHHHHhc
Confidence 57999999999999999999999999765 69999999999999887 556 67 99999999875
No 384
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.94 E-value=8.9e-11 Score=92.02 Aligned_cols=70 Identities=16% Similarity=0.259 Sum_probs=56.2
Q ss_pred cCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 172 LTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 172 ~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
++++..+.++++|+.||+||||+|+.+|++.++...+........+.+.+|.|+||.|+|+||+..+...
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 3556677899999999999999999999999998653221223456778999999999999999886543
No 385
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=98.93 E-value=4.2e-10 Score=94.64 Aligned_cols=100 Identities=14% Similarity=0.080 Sum_probs=53.3
Q ss_pred HHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhH
Q 014101 59 LKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETT 137 (430)
Q Consensus 59 l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~ 137 (430)
.+++|..+|.|+||.|+.+|+..++..........+++..+++.+ |.+++| |+.+||..++.
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~------D~d~~G~I~~~el~~~l~----------- 67 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLL------ADPERHLITAESLRRNSG----------- 67 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHH------SBTTTTBBCHHHHHHHGG-----------
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHH------CCCCCCcCCHHHHHHHHH-----------
Confidence 468899999999999999999877654333222345566666666 678889 99999987742
Q ss_pred HHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 138 WTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 138 w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
.+|. ..++ .+.+.++|+.+|.||||.|+.+||..++..
T Consensus 68 -----~~g~-----------------------~~~~---~~e~~~~~~~~D~d~dG~I~~~EF~~~~~~ 105 (135)
T 3h4s_E 68 -----ILGI-----------------------EGMS---KEDAQGMVREGDLDGDGALNQTEFCVLMVR 105 (135)
T ss_dssp -----GGTC-----------------------CCCC---HHHHHHHHHHHCSSCSSSBCHHHHHHHHHH
T ss_pred -----HhCC-----------------------CCCC---HHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 1110 0111 234778999999999999999999999865
No 386
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=98.93 E-value=4.5e-10 Score=81.55 Aligned_cols=61 Identities=18% Similarity=0.220 Sum_probs=54.0
Q ss_pred HHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 59 LKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 59 l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
++++|+.+|+|+||.|+.+||..++..+ |.+++++++..+++.+ |.+++| |+|+||+.++.
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~-~~~~~~~~~~~~~~~~------D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLIFKSI------DADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHH-HHHHHHHHHHHHHHHH------CTTCSSSCCHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHc-cCCCcHHHHHHHHHHH------CCCCCCCCCHHHHHHHHH
Confidence 5789999999999999999999998764 6778889999999998 678888 99999998753
No 387
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=98.93 E-value=2.5e-10 Score=90.56 Aligned_cols=66 Identities=15% Similarity=0.212 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHhc-CCCCC-CCCHHHHHHhhcc-CC----CCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 174 NEAIDFLKGIFELFD-ADDDN-SLRPIEVEDLFST-AP----ECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 174 ~~~~~~l~~~F~~fD-~d~dG-~is~~el~~~~~~-~~----~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
+.+.+.|+++|+.|| +|||| +||.+||+.++.. .+ ..+ .....+++++|.|+||.|+|+||+....
T Consensus 7 e~~i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~ 81 (98)
T 3n22_A 7 EQALAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLA 81 (98)
T ss_dssp HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 345677999999998 89995 9999999999974 32 111 2234678899999999999999988644
No 388
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=98.93 E-value=1.5e-09 Score=93.89 Aligned_cols=65 Identities=11% Similarity=0.165 Sum_probs=56.2
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
..|+++|+.||+|++|+|+.+||+.++.. +|.++++++++.|++.++. +.|++| |+|+||+.+|.
T Consensus 85 ~~l~~aF~~fD~d~~G~I~~~el~~~l~~-~g~~ls~~e~~~l~~~~D~----~~d~dG~I~~~EF~~~m~ 150 (159)
T 3i5g_C 85 DEFMEAFKTFDREGQGLISSAEIRNVLKM-LGERITEDQCNDIFTFCDI----REDIDGNIKYEDLMKKVM 150 (159)
T ss_dssp HHHHHHHHHHCTTSSSEECHHHHHHHHHH-SSSCCCHHHHHHHHHHTTC----CCCSSCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCc----CCCCCCeEeHHHHHHHHH
Confidence 46899999999999999999999999765 6999999999999998731 136788 99999998753
No 389
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=98.93 E-value=1.2e-09 Score=87.77 Aligned_cols=65 Identities=20% Similarity=0.289 Sum_probs=57.9
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc--CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCF--NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~--g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
....++++|+.||+|+||+|+.+||..++..+. |.++++++++.+++.+ |.+++| |+|+||+.++
T Consensus 40 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~------D~~~dg~i~~~EF~~~~ 107 (109)
T 3fs7_A 40 TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAG------DTDGDGKIGVEEFQSLV 107 (109)
T ss_dssp CHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHH------CTTCSSSBCHHHHHHHH
T ss_pred cHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHh------CCCCCCcCcHHHHHHHH
Confidence 356799999999999999999999999876653 7889999999999998 678888 9999999875
No 390
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=98.92 E-value=1.9e-09 Score=91.08 Aligned_cols=99 Identities=15% Similarity=0.234 Sum_probs=73.6
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
++.++|+.+|.|++|.|+.+|+..++..........+++...++.+ |.+++| |+.+||..++..
T Consensus 43 ~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~------D~d~~G~I~~~el~~~l~~--------- 107 (143)
T 2obh_A 43 EIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLF------DDDETGKISFKNLKRVAKE--------- 107 (143)
T ss_dssp HHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CTTCSSSBCHHHHHHHHHH---------
T ss_pred HHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHH---------
Confidence 5677899999999999999999887654332222345666777777 778899 999999887531
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
+|. .++ .+.+.++|+.+|.||||.|+.+||..++.
T Consensus 108 -------~g~------------------------~~~---~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 108 -------LGE------------------------NLT---DEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp -------TTC------------------------CCC---HHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred -------hCC------------------------CCC---HHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 110 111 23477899999999999999999998874
No 391
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=98.92 E-value=5.9e-10 Score=84.56 Aligned_cols=66 Identities=20% Similarity=0.298 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 53 PRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFN-SPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g-~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
+...+.++ +|+.||+|+||.|+.+||..++.. +| .+++.+++..++..+ |.+++| |+|+||+.++.
T Consensus 5 ~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~~------D~~~dg~i~~~eF~~~~~ 72 (81)
T 1c7v_A 5 DDEEEILR-AFKVFDANGDGVIDFDEFKFIMQK-VGEEPLTDAEVEEAMKEA------DEDGNGVIDIPEFMDLIK 72 (81)
T ss_dssp --CHHHHH-HHHHHSCSGGGEECHHHHHHHSST-TTTCCCCHHHHHHHHHHH------CSSGGGSEEHHHHHHHHH
T ss_pred ccHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHh------CCCCCCcCcHHHHHHHHH
Confidence 34567899 999999999999999999998765 47 889999999999998 678888 99999998864
No 392
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=98.92 E-value=2.7e-10 Score=89.49 Aligned_cols=66 Identities=12% Similarity=0.193 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHhc-CCCC-CCCCHHHHHHhhcc-CCC---CC---CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 175 EAIDFLKGIFELFD-ADDD-NSLRPIEVEDLFST-APE---CP---WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 175 ~~~~~l~~~F~~fD-~d~d-G~is~~el~~~~~~-~~~---~~---~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
.+.+.|+++|+.|| +||| |+||.+||+.++.. .+. .+ .....+++++|.|+||.|+|+||+....-
T Consensus 7 ~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 7 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 45577999999998 7996 89999999999974 432 11 22346788999999999999999987543
No 393
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=98.92 E-value=1.9e-09 Score=94.94 Aligned_cols=64 Identities=25% Similarity=0.381 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
....|+++|+.||+|++|+|+.+||..++.. +|.++++++++.|++.+ | |++| |+|+||+.+|.
T Consensus 82 ~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~-~g~~~~~~ei~~l~~~~------d-d~dG~I~~~EF~~~m~ 146 (176)
T 2lhi_A 82 SEQELLEAFKVFDKNGDGLISAAELKHVLTS-IGEKLTDAEVDDMLREV------S-DGSGEINIQQFAALLS 146 (176)
T ss_dssp HHHHHHHHHHHHCSSCSSSBCHHHHHHHHHT-TTCCCCHHHHHHHHHHH------H-TTSSCBCTTHHHHHHT
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCcccchHHHHHHHHhh------c-CCCCeEeHHHHHHHHH
Confidence 3467999999999999999999999999765 68999999999999988 4 6788 99999999864
No 394
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=98.92 E-value=2.4e-09 Score=89.80 Aligned_cols=98 Identities=11% Similarity=0.114 Sum_probs=79.1
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+.++|+.+|.|+||.|+.+|+..++..........+.+..+++.+ |.+++| |+.+||..++..
T Consensus 43 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~i~~~el~~~l~~--------- 107 (142)
T 2bl0_C 43 AFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTF------DPEGTGYIPKAALQDALLN--------- 107 (142)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHT------CCSSCSCEEHHHHHHHHHH---------
T ss_pred HHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHH------CCCCCCcCcHHHHHHHHHH---------
Confidence 5778999999999999999999998876556666788888888888 788999 999999887541
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
+|. .++. +.+..+|+.+| |+||.|+.+||..++.
T Consensus 108 -------~g~------------------------~~~~---~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 108 -------LGD------------------------RLKP---HEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp -------SSS------------------------CCCH---HHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred -------cCC------------------------CCCH---HHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 110 1112 34778999999 9999999999998774
No 395
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=98.92 E-value=9.5e-10 Score=82.56 Aligned_cols=66 Identities=26% Similarity=0.308 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhhcC-CCCC-ccCHHHHHHHHHHhcCCCC-CHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDH-DRDG-ALSDAELNDFQVKCFNSPL-QPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~-d~dG-~is~~El~~~~~~~~g~~~-~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
+...++++|+.||+ |+|| .|+.+||..++...+|..+ +.+++..+++.+ |.+++| |+|+||+.++.
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~------D~~~dg~i~~~eF~~~~~ 74 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQEL------DKNGDGEVSFEEFQVLVK 74 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHT------CCCSSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHh------cCCCCCCCcHHHHHHHHH
Confidence 46789999999999 9999 9999999999876577766 888999999988 678888 99999998865
No 396
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=98.91 E-value=1.8e-09 Score=80.59 Aligned_cols=64 Identities=20% Similarity=0.262 Sum_probs=57.4
Q ss_pred HHHHHHHHHhh-cCCCC-CccCHHHHHHHHHHhcCCCC--CHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 56 VRALKRIFILC-DHDRD-GALSDAELNDFQVKCFNSPL--QPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 56 ~~~l~~~F~~~-D~d~d-G~is~~El~~~~~~~~g~~~--~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...++++|+.| |+|+| |.|+.+||..++..+ |.++ +.+++..+++.+ |.+++| |+|+||+.++.
T Consensus 4 ~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~l~~~~------D~~~~g~i~~~eF~~~~~ 72 (76)
T 1qx2_A 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTL-GPSLLKGMSTLDEMIEEV------DKNGDGEVSFEEFLVMMK 72 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHH-GGGSCTTSCSHHHHHHHH------CTTCSSEECHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCeECHHHHHHHHHHh-CCCcCCCHHHHHHHHHHh------CCCCCCcEeHHHHHHHHH
Confidence 46799999999 99999 999999999998765 7778 899999999998 678889 99999999865
No 397
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=98.91 E-value=1.7e-09 Score=83.66 Aligned_cols=69 Identities=22% Similarity=0.287 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHhhc-CCCCC-ccCHHHHHHHHHHh--cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 53 PRCVRALKRIFILCD-HDRDG-ALSDAELNDFQVKC--FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 53 ~~~~~~l~~~F~~~D-~d~dG-~is~~El~~~~~~~--~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
+.....++++|+.|| +|+|| .|+.+||..++... +|.+++++++..+++.+ |.+++| |+|+||+.++..
T Consensus 6 ~~~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~------D~~~dg~i~~~eF~~~~~~ 79 (90)
T 1k8u_A 6 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDL------DRNKDQEVNFQEYVTFLGA 79 (90)
T ss_dssp HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHH------HHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHh------CCCCCCCCcHHHHHHHHHH
Confidence 345679999999999 69999 99999999998763 57888999999999998 567888 999999998753
No 398
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=98.91 E-value=1.6e-09 Score=92.92 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=77.1
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcC---CCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCC
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFN---SPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGR 133 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g---~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~ 133 (430)
.+.++|+.+|.|+||.|+.+|+..++..... .....+.+..+++.+ |.+++| |+.+||..++..
T Consensus 56 ~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~i~~~El~~~l~~------ 123 (161)
T 1dtl_A 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMF------DKNADGYIDLEELKIMLQA------ 123 (161)
T ss_dssp HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHH------CTTCSSEEEHHHHGGGGTT------
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHH------
Confidence 5678999999999999999999998776654 445567778888887 788899 999999876320
Q ss_pred chhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 134 LETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 134 ~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
+| ..++ .+.+..+|+.+|.|+||.|+.+||..++..
T Consensus 124 ----------~g------------------------~~~~---~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 124 ----------TG------------------------ETIT---EDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp ----------C--------------------------CCC---HHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred ----------hC------------------------CCCC---HHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 00 0112 234778999999999999999999998864
No 399
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.91 E-value=2.4e-10 Score=90.86 Aligned_cols=64 Identities=13% Similarity=0.148 Sum_probs=52.5
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 178 DFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 178 ~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
+.++++|+.||+||||+|+.+|++.+|...+........+.+.+|.|+||.|+|+||+..+.+.
T Consensus 11 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~ 74 (99)
T 1qjt_A 11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRLV 74 (99)
T ss_dssp THHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 3588999999999999999999999998754221223457788999999999999999986654
No 400
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=98.90 E-value=5.3e-09 Score=88.99 Aligned_cols=99 Identities=16% Similarity=0.211 Sum_probs=79.1
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+.++|..+|.|++|.|+..|+..++..........+++..+++.+ |.+++| |+.+||..++..
T Consensus 47 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~------D~d~~G~I~~~El~~~l~~--------- 111 (148)
T 2lmt_A 47 ELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIF------DRDGDGFISPAELRFVMIN--------- 111 (148)
T ss_dssp HHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHH------HSSCSSEECHHHHHHHHHH---------
T ss_pred HHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHH------CCCCcCcCcHHHHHHHHHH---------
Confidence 5678899999999999999999888776666666788888888888 678899 999999876532
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
+|. .++ .+.+.++|+.+|.||||.|+.+||..+|+
T Consensus 112 -------~g~------------------------~~~---~~e~~~l~~~~D~d~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 112 -------LGE------------------------KVT---DEEIDEMIREADFDGDGMINYEEFVWMIS 146 (148)
T ss_dssp -------HTC------------------------CCC---HHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred -------cCc------------------------ccc---HHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 220 111 23467899999999999999999999885
No 401
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=98.90 E-value=2.4e-09 Score=93.70 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=77.0
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+..+|+.+|.|+||.|+.+|+..++..........+.+..+++.+ |.+++| |+.+||..++..
T Consensus 48 ~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~I~~~E~~~~l~~--------- 112 (179)
T 2f2o_A 48 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF------DKDGNGYISAAELRHVMTN--------- 112 (179)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CTTCSSEECHHHHHHHHHH---------
T ss_pred HHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHH---------
Confidence 5778999999999999999999888765433333455677777777 778999 999999887542
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAP 208 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~ 208 (430)
+| ..++ .+.+..+|+.+|.|+||.|+.+||..++...+
T Consensus 113 -------~g------------------------~~~~---~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 150 (179)
T 2f2o_A 113 -------LG------------------------EKLT---DEEVDEMIREADIDGDGQVNYEEFVQMMTAKG 150 (179)
T ss_dssp -------C--------------------------CCC---HHHHHHHHHHHCTTCSSSEEHHHHHHHSCC--
T ss_pred -------hC------------------------CCCC---HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcC
Confidence 11 0111 23467899999999999999999999997643
No 402
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=98.90 E-value=5.4e-09 Score=93.55 Aligned_cols=115 Identities=13% Similarity=0.108 Sum_probs=83.2
Q ss_pred ccCCccHHHHHH---------HHHHHHhhcCCCCCccCHHHHHHHHHHhcC----------------CCCCHHHHHHHHH
Q 014101 47 ESQALKPRCVRA---------LKRIFILCDHDRDGALSDAELNDFQVKCFN----------------SPLQPSEIVGVKR 101 (430)
Q Consensus 47 ~~~~lt~~~~~~---------l~~~F~~~D~d~dG~is~~El~~~~~~~~g----------------~~~~~~e~~~i~~ 101 (430)
.++.++..+... +.++|+.+|.|+||.|+.+|+..++..... .....+.+..+++
T Consensus 42 ~dG~I~~~El~~~~~lg~~~~~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~ 121 (202)
T 2bec_A 42 KKGYLSRMDLQQIGALAVNPLGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQ 121 (202)
T ss_dssp CSSCCCHHHHHTCHHHHHSTTHHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHhcCCCccHHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHH
Confidence 356666666544 688999999999999999999988665443 3344666777787
Q ss_pred HHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHH-HHH
Q 014101 102 VVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEA-IDF 179 (430)
Q Consensus 102 ~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~ 179 (430)
.+ |.+++| |+.+||..++... +| ..++... ...
T Consensus 122 ~~------D~d~dG~Is~~El~~~l~~~---------------~g------------------------~~~~~~~~~~~ 156 (202)
T 2bec_A 122 LY------DLDRDGKISRHEMLQVLRLM---------------VG------------------------VQVTEEQLENI 156 (202)
T ss_dssp HH------CTTCSSEECHHHHHHHHHHS---------------CC------------------------SCCCHHHHHHH
T ss_pred Hh------CCCCCCeEcHHHHHHHHHHh---------------cC------------------------CCCCHHHHHHH
Confidence 77 788999 9999999875421 01 0122222 223
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 180 LKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 180 l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
+..+|+.+|.|+||.|+.+||..++..
T Consensus 157 ~~~~~~~~D~d~dG~Is~~EF~~~~~~ 183 (202)
T 2bec_A 157 ADRTVQEADEDGDGAVSFVEFTKSLEK 183 (202)
T ss_dssp HHHHHHHHCSSCSSSEEHHHHHHTTTT
T ss_pred HHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 444666699999999999999999875
No 403
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=98.90 E-value=8.5e-10 Score=88.54 Aligned_cols=65 Identities=25% Similarity=0.302 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc--CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCF--NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~--g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
....++++|+.||+|+||+|+.+||..++..++ |.+++++++..+++.+ |.+++| |+|+||+.++
T Consensus 39 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~------D~~~dg~i~~~eF~~~~ 106 (108)
T 1rro_A 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAA------DNDGDGKIGADEFQEMV 106 (108)
T ss_dssp CHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHH------CCSSSSSEEHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHh------CCCCCCcCcHHHHHHHH
Confidence 356899999999999999999999999977654 7889999999999998 678889 9999999875
No 404
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=98.90 E-value=3.9e-10 Score=90.34 Aligned_cols=65 Identities=12% Similarity=0.203 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHhc-CCCC-CCCCHHHHHHhhcc-CCC---CC---CCCCcccccccccCCcccchhhHHhhhh
Q 014101 175 EAIDFLKGIFELFD-ADDD-NSLRPIEVEDLFST-APE---CP---WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 175 ~~~~~l~~~F~~fD-~d~d-G~is~~el~~~~~~-~~~---~~---~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
...+.|+++|+.|| +||| |+||.+||+.++.. .+. .+ .....+++++|.|+||.|+|+||+....
T Consensus 10 ~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~ 83 (104)
T 3zwh_A 10 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS 83 (104)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHH
Confidence 45577999999997 8886 89999999999975 431 11 2234678899999999999999998754
No 405
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=98.89 E-value=5.1e-09 Score=85.45 Aligned_cols=73 Identities=12% Similarity=0.170 Sum_probs=64.4
Q ss_pred cccCCccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 46 QESQALKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 46 ~~~~~lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
.....+|+++++.++++|+.+|+ +||+|+.+|++.++++. .++.+++..|.+.+ |.+++| |+|+||+.+
T Consensus 22 ~~~W~it~ee~~~y~~iF~~lD~-~dG~Isg~elr~~~~~s---gLp~~~L~~Iw~la------D~d~dG~Ld~~EF~~a 91 (121)
T 3fia_A 22 LDTWAITVEERAKHDQQFHSLKP-ISGFITGDQARNFFFQS---GLPQPVLAQIWALA------DMNNDGRMDQVEFSIA 91 (121)
T ss_dssp TTTSCCCHHHHHHHHHHHHHTCC-BTTBEEHHHHHHHHGGG---CCCHHHHHHHHHHH------CTTCSSEECHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC-CCCeECHHHHHHHHHHc---CCCHHHHHHHHHHH------cCCCCCcCCHHHHHHH
Confidence 34567899999999999999999 89999999999998753 46799999999998 788999 999999998
Q ss_pred HHHH
Q 014101 125 HALF 128 (430)
Q Consensus 125 ~~~~ 128 (430)
|.+.
T Consensus 92 M~Li 95 (121)
T 3fia_A 92 MKLI 95 (121)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8643
No 406
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=98.89 E-value=2.9e-09 Score=90.35 Aligned_cols=99 Identities=17% Similarity=0.257 Sum_probs=74.5
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+..+|..+|.|+||.|+.+|+..++..........+++..+++.+ |.+++| |+.+||..++..
T Consensus 47 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~------D~d~~G~I~~~el~~~l~~--------- 111 (148)
T 1exr_A 47 ELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVF------DRDGNGLISAAELRHVMTN--------- 111 (148)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH------STTCSSCBCHHHHHHHHHH---------
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHh------CCCCCCcCCHHHHHHHHHH---------
Confidence 5678899999999999999999887654433223445666677776 778889 999999887542
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
+| ..++. +.+.++|+.+|.|+||.|+.+|+..++.
T Consensus 112 -------~g------------------------~~~~~---~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 112 -------LG------------------------EKLTD---DEVDEMIREADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp -------TT------------------------CCCCH---HHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred -------hC------------------------CCCCH---HHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 11 01122 3467899999999999999999998874
No 407
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.89 E-value=6.8e-11 Score=91.13 Aligned_cols=59 Identities=20% Similarity=0.286 Sum_probs=48.9
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhh
Q 014101 180 LKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 180 l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
++++|+.||+|++|.|+.+||+.++...+..+ .....+++.+|.|++|.|+|+||+..+
T Consensus 25 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp TTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 67899999999999999999999998764322 122356788999999999999998764
No 408
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.89 E-value=3.2e-09 Score=84.78 Aligned_cols=65 Identities=18% Similarity=0.189 Sum_probs=57.9
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
....|+++|+.||+|+||.|+.+||..++.. +|.+++.+++..++..+ |.+++| |+|+||+.++.
T Consensus 22 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~e~~~l~~~~------d~~~~g~i~~~eF~~~~~ 87 (105)
T 1wlz_A 22 HYHAITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQFDRLWNEM------PVNAKGRLKYPDFLSRFS 87 (105)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-HTCCCCHHHHHHHHTTS------CBCTTSCBCHHHHHHHHC
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHc------CCCCCCCCcHHHHHHHHh
Confidence 4578999999999999999999999999876 58889999999999887 677888 99999998854
No 409
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=98.89 E-value=9.4e-10 Score=87.53 Aligned_cols=67 Identities=10% Similarity=0.103 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHhcCCC---CCCCCHHHHHHhhcc-CCCCCC------CCCcccccccccCCcccchhhHHhhhhhh
Q 014101 175 EAIDFLKGIFELFDADD---DNSLRPIEVEDLFST-APECPW------DEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 175 ~~~~~l~~~F~~fD~d~---dG~is~~el~~~~~~-~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
.+.+.|+++|+.||+|+ +|+|+.+||+.++.. .+.... ....+++++|.|+||.|+|+||+..+...
T Consensus 8 ~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 8 KAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 45677999999999964 799999999999975 222211 23467889999999999999999886544
No 410
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=98.88 E-value=3.8e-09 Score=90.43 Aligned_cols=99 Identities=14% Similarity=0.141 Sum_probs=79.0
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+.++|+.+|.|++|.|+.+|+..++..........+.+..+++.+ |.+++| |+.+||..++..
T Consensus 60 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~i~~~el~~~l~~--------- 124 (161)
T 3fwb_A 60 EILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLF------DDDHTGKISIKNLRRVAKE--------- 124 (161)
T ss_dssp HHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHH------CTTCSSEECHHHHHHHHHH---------
T ss_pred HHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHH------cCCCCCeEeHHHHHHHHHH---------
Confidence 5778999999999999999999988766555555677788888888 678899 999999887541
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
+|. .++ .+.+..+|+.+|.|+||.|+.+||..++.
T Consensus 125 -------~~~------------------------~~~---~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 125 -------LGE------------------------TLT---DEELRAMIEEFDLDGDGEINENEFIAICT 159 (161)
T ss_dssp -------TTC------------------------CCC---HHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred -------hCC------------------------CCC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 110 111 23477899999999999999999999885
No 411
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=98.88 E-value=8.7e-09 Score=93.58 Aligned_cols=107 Identities=18% Similarity=0.216 Sum_probs=78.2
Q ss_pred HHHHHhhcCCCCCc-cCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhH
Q 014101 60 KRIFILCDHDRDGA-LSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETT 137 (430)
Q Consensus 60 ~~~F~~~D~d~dG~-is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~ 137 (430)
.++|+.+|.|+||. |+.+|+..++.........++.+..+++.+ |.+++| |+.+||..++........
T Consensus 94 ~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~------D~d~dG~Is~~El~~~l~~~~~~~~---- 163 (214)
T 2l4h_A 94 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIF------DFDDDGTLNREDLSRLVNCLTGEGE---- 163 (214)
T ss_dssp HHHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHH------CTTCSSCBCHHHHHHHHHHHHHSSS----
T ss_pred HHHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHh------CCCCCCcCCHHHHHHHHHHHhcccc----
Confidence 46899999999999 999999988765443333466788888888 788999 999999988653221000
Q ss_pred HHHHHhhcCCCCcccccccCCCCcccCCCCCccccCH-HHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 138 WTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTN-EAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 138 w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
...++. +..+.+.++|+.+|.|+||.|+.+||..++...
T Consensus 164 -------------------------------~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 203 (214)
T 2l4h_A 164 -------------------------------DTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 203 (214)
T ss_dssp -------------------------------CTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHHHHHHTC
T ss_pred -------------------------------CCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhC
Confidence 000111 122234569999999999999999999998753
No 412
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.88 E-value=4.7e-10 Score=86.31 Aligned_cols=67 Identities=25% Similarity=0.397 Sum_probs=58.0
Q ss_pred ccHHHHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHH
Q 014101 51 LKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFL 124 (430)
Q Consensus 51 lt~~~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~ 124 (430)
+++.+.+.++++|+.||+|+||.|+.+||..+++. +|.+++++++..+++.+ |.+++| |+|+||+.+
T Consensus 17 l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~------d~~~~g~i~~~eF~~~ 84 (87)
T 1s6j_A 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAA------DIDKSGTIDYGEFIAA 84 (87)
T ss_dssp SCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHT-TTSSCCHHHHHHHHHHH------CTTCSSEECHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHh------CCCCCCcCcHHHHHHH
Confidence 34444567899999999999999999999999765 58889999999999998 678889 999999864
No 413
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=98.88 E-value=2.4e-10 Score=89.20 Aligned_cols=71 Identities=17% Similarity=0.246 Sum_probs=58.3
Q ss_pred ccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 169 SVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 169 ~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
...++++..+.++++|+.||.||||.|+.+||..++...+........+++.+|.|+||.|+|+||+..|.
T Consensus 18 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 18 GADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGFL 88 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEECHHHHTHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 34666777888999999999999999999999999987652222334577889999999999999998865
No 414
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=98.88 E-value=4.6e-10 Score=85.98 Aligned_cols=69 Identities=26% Similarity=0.327 Sum_probs=57.4
Q ss_pred ccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 171 ELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 171 ~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+++...+.++++|+.||+||+|.|+.+||+.++...+..+ .....++..+|.|++|.|+|+||+..|.
T Consensus 7 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 77 (85)
T 2ktg_A 7 VLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIML 77 (85)
T ss_dssp SSSHHHHHHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 45677788899999999999999999999999998764322 2234567889999999999999998865
No 415
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=98.87 E-value=9.2e-10 Score=89.47 Aligned_cols=66 Identities=11% Similarity=0.191 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHhc-CCCCC-CCCHHHHHHhhcc-----CCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 174 NEAIDFLKGIFELFD-ADDDN-SLRPIEVEDLFST-----APECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 174 ~~~~~~l~~~F~~fD-~d~dG-~is~~el~~~~~~-----~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
....+.|+++|+.|| +|||| +|+.+||+.++.. .+..+ .....+++.+|.|+||.|+|+||+..+.
T Consensus 18 ~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~ 92 (113)
T 2lnk_A 18 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLS 92 (113)
T ss_dssp HHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 345567999999999 99998 9999999999964 22212 2234577899999999999999998754
No 416
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=98.87 E-value=1.5e-09 Score=89.71 Aligned_cols=95 Identities=19% Similarity=0.182 Sum_probs=72.8
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHh--cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCC
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKC--FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGR 133 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~--~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~ 133 (430)
..++++|+.+|.|+||.|+.+|+..++..+ .+...+.+++..+++.+ |.+++| |+++||..++..
T Consensus 36 ~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~------D~d~~G~i~~~e~~~~l~~------ 103 (134)
T 1jfj_A 36 QLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLM------DVDGDGKLTKEEVTSFFKK------ 103 (134)
T ss_dssp HHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHH------CCSSSSEEEHHHHHHHHTT------
T ss_pred HHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHH------CCCCCCccCHHHHHHHHHH------
Confidence 467899999999999999999998775311 12333456677777777 778899 999999987531
Q ss_pred chhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhh
Q 014101 134 LETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLF 204 (430)
Q Consensus 134 ~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~ 204 (430)
++ .. .+..+|+.+|.|+||.|+.+|+..++
T Consensus 104 ----------~~----------------------------~~---~~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 104 ----------HG----------------------------IE---KVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp ----------TT----------------------------CH---HHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred ----------hC----------------------------HH---HHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 00 00 16789999999999999999998865
No 417
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=98.86 E-value=4.1e-10 Score=84.45 Aligned_cols=67 Identities=18% Similarity=0.211 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 173 TNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 173 s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
++...+.++++|+.||+|++|.|+.+||+.++...+..+ .....++..+|.|++|.|+|+||+..+.
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 70 (77)
T 2joj_A 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMT 70 (77)
T ss_dssp CHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 455667899999999999999999999999998754322 2234567889999999999999998865
No 418
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=98.86 E-value=6.2e-10 Score=89.54 Aligned_cols=70 Identities=14% Similarity=0.038 Sum_probs=56.7
Q ss_pred ccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 171 ELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 171 ~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
.++++..+.++++|+.||+ +||+|+.+|++.+|...+........+.+.+|.|+||.|+|+||+..+.+.
T Consensus 8 ~ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~ 77 (106)
T 1eh2_A 8 AVKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77 (106)
T ss_dssp SSCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 3556677889999999999 999999999999998764221223457788999999999999999886543
No 419
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=98.86 E-value=4.5e-09 Score=82.95 Aligned_cols=68 Identities=22% Similarity=0.351 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHhhc-CCCCC-ccCHHHHHHHHHHhc----CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 54 RCVRALKRIFILCD-HDRDG-ALSDAELNDFQVKCF----NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 54 ~~~~~l~~~F~~~D-~d~dG-~is~~El~~~~~~~~----g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
.....++++|+.|| +|+|| .|+.+||..++...+ |.+++++++..+++.+ |.+++| |+|+||+.++.
T Consensus 10 ~~~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~------D~~~dg~I~~~EF~~~~~ 83 (99)
T 1qls_A 10 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKL------DLDSDGQLDFQEFLNLIG 83 (99)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHH------CTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHh------CCCCCCcCcHHHHHHHHH
Confidence 45679999999998 99999 999999999976433 3678899999999998 678888 99999999875
Q ss_pred H
Q 014101 127 L 127 (430)
Q Consensus 127 ~ 127 (430)
.
T Consensus 84 ~ 84 (99)
T 1qls_A 84 G 84 (99)
T ss_dssp H
T ss_pred H
Confidence 3
No 420
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=98.85 E-value=2.2e-08 Score=84.56 Aligned_cols=100 Identities=12% Similarity=0.095 Sum_probs=75.6
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCC----CHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcC
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPL----QPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKG 132 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~----~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~ 132 (430)
.+.++|+.+|.|++|.|+.+|+..++........ ..+.+..+++.+ |.+++| |+.+||..++...
T Consensus 48 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~i~~~el~~~l~~~---- 117 (153)
T 3ox6_A 48 ELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREF------DTNGDGEISTSELREAMRAL---- 117 (153)
T ss_dssp HHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHH------CTTCSSSBCHHHHHHHHHHH----
T ss_pred HHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHHH----
Confidence 5678899999999999999999988765433322 246677777777 678889 9999999876421
Q ss_pred CchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 133 RLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 133 ~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
+|. .++ .+.+..+|+.+|.|+||.|+.+||..+++
T Consensus 118 -----------~~~------------------------~~~---~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 118 -----------LGH------------------------QVG---HRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp -----------HSS------------------------CCC---HHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred -----------hcC------------------------CCC---HHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 110 011 23477899999999999999999999875
No 421
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=98.85 E-value=4.1e-09 Score=88.64 Aligned_cols=98 Identities=15% Similarity=0.180 Sum_probs=76.4
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+.++|+.+|.|+||.|+.+|+..++..........+.+..+++.+ |.+++| |+.+||..++..
T Consensus 48 ~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~i~~~e~~~~l~~--------- 112 (147)
T 4ds7_A 48 EVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVF------DKNGDGLISAAELKHVLTS--------- 112 (147)
T ss_dssp HHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHH------CTTCSSEECHHHHHHHHHH---------
T ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHh------CCCCCCeECHHHHHHHHHH---------
Confidence 5778999999999999999999988766544444566777777777 678889 999999987541
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
+|. .++ .+.+..+|+.+| |+||.|+.+||..+++
T Consensus 113 -------~~~------------------------~~~---~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 113 -------IGE------------------------KLT---DAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp -------TTC------------------------CCC---HHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred -------cCC------------------------CCC---HHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 110 111 234678999999 9999999999999875
No 422
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=98.84 E-value=7.1e-10 Score=85.15 Aligned_cols=70 Identities=21% Similarity=0.177 Sum_probs=56.5
Q ss_pred ccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 171 ELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 171 ~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
.+++...+.++++|+.||+||||.|+.+||..++...+ .+ .....+.+.+|.|+||.|+|+||+..+...
T Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 4 EDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp --CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred cCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 34566778899999999999999999999999998765 22 122456688999999999999999886543
No 423
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=98.84 E-value=4.2e-11 Score=99.24 Aligned_cols=97 Identities=8% Similarity=-0.036 Sum_probs=45.9
Q ss_pred hcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHH-----HHHHHHHcCCchhHHHHHHhhcCCCCcccccccCCC
Q 014101 86 CFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLF-----LHALFIEKGRLETTWTVLRKFGYNNDIKLADELIPY 159 (430)
Q Consensus 86 ~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~-----~~~~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~ 159 (430)
.+|..++++++..++..+ +| |+|+||+. ++....
T Consensus 4 ~lG~~~t~~ei~~~~~~~----------~g~i~f~EF~~~~~~~~~~~~~------------------------------ 43 (123)
T 2kld_A 4 AIGINDTYSEVKSDLAQQ----------KAEMELSDLIRKGYHKALVKLK------------------------------ 43 (123)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcCCCCCHHHHHHHHHHc----------CCCccHHHHHhHhHHHHHHHhh------------------------------
Confidence 458888999999888764 35 99999998 543110
Q ss_pred CcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhh
Q 014101 160 SAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEW 238 (430)
Q Consensus 160 ~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w 238 (430)
.+....+.++++|+.|| |+|+.+||+.++...+........+++.+|.|+||.|+|+||+...
T Consensus 44 ------------~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~lG~t~~ei~~~~~~~D~d~dG~I~~~EF~~~~ 106 (123)
T 2kld_A 44 ------------LKKNTVDDISESLRQGG----GKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMR 106 (123)
T ss_dssp -------------------CCSCSSTTTT----TCEEHHHHHHHTTTCCSSHHHHHHHHHHHSSSSCCEECSHHHHHCS
T ss_pred ------------cChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHhCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHH
Confidence 00111233678999999 9999999999998765511223457789999999999999999874
No 424
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=98.84 E-value=6.4e-09 Score=89.05 Aligned_cols=100 Identities=16% Similarity=0.202 Sum_probs=75.4
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCC---CHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCC
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPL---QPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGR 133 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~---~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~ 133 (430)
.+..+|+.+|.|+||.|+.+|+..++........ ..+.+..+++.+ |.+++| |+.+||..++..
T Consensus 57 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~I~~~e~~~~l~~------ 124 (162)
T 1top_A 57 ELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIF------DKNADGFIDIEELGEILRA------ 124 (162)
T ss_dssp HHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CTTCSSCBCHHHHHHHHHT------
T ss_pred HHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHH------
Confidence 5678999999999999999999888665432211 345566777777 778889 999999887531
Q ss_pred chhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 134 LETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 134 ~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
+| ..++ .+.+..+|+.+|.|+||.|+.+||..++..
T Consensus 125 ----------~g------------------------~~~~---~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 160 (162)
T 1top_A 125 ----------TG------------------------EHVT---EEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp ----------TT------------------------CCCC---HHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred ----------hC------------------------CCCC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 11 0111 234778999999999999999999998864
No 425
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=98.83 E-value=1.9e-08 Score=88.40 Aligned_cols=107 Identities=17% Similarity=0.226 Sum_probs=77.9
Q ss_pred HHHHHhhcCCCCCc-cCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchhH
Q 014101 60 KRIFILCDHDRDGA-LSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLETT 137 (430)
Q Consensus 60 ~~~F~~~D~d~dG~-is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~ 137 (430)
.++|..+|.|+||. |+.+|+..++..........+.+..+++.+ |.+++| |+.+||..++.......
T Consensus 63 ~~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~------D~d~~G~I~~~El~~~l~~~~~~~----- 131 (183)
T 1dgu_A 63 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIF------DFDDDGTLNREDLSRLVNCLTGEG----- 131 (183)
T ss_dssp HHHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHH------CTTCSSEEEHHHHHHHHHHHHSSS-----
T ss_pred HHHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHh------CCCCCCcCCHHHHHHHHHHHhccc-----
Confidence 36899999999999 999999998776544444456888888888 788999 99999998765321000
Q ss_pred HHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHH-HHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 138 WTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAI-DFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 138 w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
....++.+.. ..+.++|+.+|.|+||.|+.+||..++...
T Consensus 132 ------------------------------~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 172 (183)
T 1dgu_A 132 ------------------------------EDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 172 (183)
T ss_dssp ------------------------------CCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHCSS
T ss_pred ------------------------------ccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhC
Confidence 0001111111 123359999999999999999999998753
No 426
>2ohf_A Protein OLA1, GTP-binding protein 9; ATPase, GTPase, P-loop, OBG-like, hydrolase; HET: ACP; 2.70A {Homo sapiens}
Probab=98.83 E-value=2.5e-09 Score=105.57 Aligned_cols=92 Identities=16% Similarity=0.110 Sum_probs=52.8
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCcCCCccceEEEEEEEcCCC---------------eEEEEEEeCCChhHH
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNYTPTTDERYAVNVVDQPGG---------------TKKTVVLREIPEEAV 347 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~~~t~~~~~~~~~v~~~~~---------------~~~~~i~d~~G~e~~ 347 (430)
...++|+++|.+|||||||+|++++..+.....|+.+.......+.+++. ...+.+||++|....
T Consensus 20 ~~~~kvgIVG~pnvGKSTL~n~Ltg~~~~~~~~p~tTi~p~~g~v~v~~~r~~~l~~~~~p~~~~~~~i~lvDtpGl~~~ 99 (396)
T 2ohf_A 20 GTSLKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKIPAFLNVVDIAGLVKG 99 (396)
T ss_dssp SSCCCEEEECCSSSSHHHHHHHHHC-------------CCSEEEEECCCHHHHHHHHHHCCSEEECCEEEEEECCC----
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHCCCccccCCCccccCceeEEEEECCccceeeccccCcccccccccEEEECCCcccc
Confidence 44579999999999999999999998775544455555555566666642 124789999997654
Q ss_pred Hh----hh-ccccccccccEEEEEEECCChhh
Q 014101 348 AK----LL-SNKDSLAACDIAVFVHDSSDESS 374 (430)
Q Consensus 348 ~~----~~-~~~~~~~~ad~vilv~D~t~~~S 374 (430)
.. +. ....+++.+|++++|+|+++.++
T Consensus 100 as~~~glg~~~l~~ir~aD~Il~VvD~~~~~~ 131 (396)
T 2ohf_A 100 AHNGQGLGNAFLSHISACDGIFHLTRAFEDDD 131 (396)
T ss_dssp -------CCHHHHHHHTSSSEEEEEEC-----
T ss_pred cchhhHHHHHHHHHHHhcCeEEEEEecCCCcc
Confidence 43 10 11467799999999999986544
No 427
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=98.83 E-value=1.3e-09 Score=82.91 Aligned_cols=60 Identities=22% Similarity=0.309 Sum_probs=49.8
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHhhccCC--C--CCCCCCc----ccccccccCCcccchhhHHhh
Q 014101 178 DFLKGIFELFDADDDNSLRPIEVEDLFSTAP--E--CPWDEAP----YKDAAEKTALGGLSLDGFLSE 237 (430)
Q Consensus 178 ~~l~~~F~~fD~d~dG~is~~el~~~~~~~~--~--~~~~~~~----~~~~~d~~~dg~i~~~ef~~~ 237 (430)
+.++.+|+.||+|+||.|+.+||..++...+ . .+..... +.+.+|.|+||.|+|+||+..
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~ 74 (83)
T 1yx7_A 7 AELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNA 74 (83)
T ss_dssp THHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHh
Confidence 3588999999999999999999999998654 2 2233445 778999999999999999955
No 428
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=98.83 E-value=1.6e-09 Score=87.13 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhc-CCCC-CCCCHHHHHHhhcc-CCC-CC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 175 EAIDFLKGIFELFD-ADDD-NSLRPIEVEDLFST-APE-CP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 175 ~~~~~l~~~F~~fD-~d~d-G~is~~el~~~~~~-~~~-~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
...+.|+++|+.|| +||+ |+|+.+||+.++.. .+. .+ .....+++.+|.|+||.|+|+||+..+.
T Consensus 19 ~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~ 89 (106)
T 2h2k_A 19 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIG 89 (106)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence 34567999999999 8997 79999999999974 442 22 2345678899999999999999998754
No 429
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=98.83 E-value=1.1e-09 Score=85.00 Aligned_cols=70 Identities=20% Similarity=0.337 Sum_probs=57.6
Q ss_pred ccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 171 ELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 171 ~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
.+++...+.++++|+.||+||+|.|+.+||..++...+..+ .....++..+|.|+||.|+|+||+..|.-
T Consensus 13 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 46677778899999999999999999999999998764322 22345678899999999999999988753
No 430
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=98.81 E-value=1.4e-09 Score=85.64 Aligned_cols=66 Identities=12% Similarity=0.191 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHhc-CCCC-CCCCHHHHHHhhcc-CC----CCC--CCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 176 AIDFLKGIFELFD-ADDD-NSLRPIEVEDLFST-AP----ECP--WDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 176 ~~~~l~~~F~~fD-~d~d-G~is~~el~~~~~~-~~----~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
..+.|+++|+.|| +||| |+|+.+||+.++.. .+ ..+ .....+++.+|.|+||.|+|+||+..+.-.
T Consensus 7 ~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 7 AMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 4567999999999 7994 89999999999974 22 111 223457789999999999999999987643
No 431
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=98.81 E-value=2.8e-09 Score=81.83 Aligned_cols=68 Identities=15% Similarity=0.113 Sum_probs=55.5
Q ss_pred ccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CC---CCcccccccccCCcccchhhHHhhhh
Q 014101 171 ELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WD---EAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 171 ~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~---~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+++...+.++++|+.||+|+||.|+.+||..++...+..+ .. ...++..+|.|++|.|+| ||+..+.
T Consensus 7 ~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~ 79 (86)
T 1j7q_A 7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCS 79 (86)
T ss_dssp CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHH
Confidence 34556677899999999999999999999999998765433 22 335667899999999999 9998764
No 432
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=98.80 E-value=5.5e-09 Score=93.34 Aligned_cols=107 Identities=15% Similarity=0.155 Sum_probs=74.5
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+.++|+.+|.|+||.|+.+|+..++... ......+.+..+++.+ |.+++| |+++||..++...
T Consensus 74 ~~~~~~~~~D~d~dg~i~~~ef~~~~~~~-~~~~~~~~~~~~F~~~------D~d~~G~I~~~El~~~l~~~-------- 138 (204)
T 3e3r_A 74 EAEGVCRKWDRNGSGTLDLEEFLRALRPP-MSQAREAVIAAAFAKL------DRSGDGVVTVDDLRGVYSGR-------- 138 (204)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHTSCC-CCHHHHHHHHHHHHHH------CTTCSSEECHHHHHHHCCCT--------
T ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHhh-cCchHHHHHHHHHHHh------CcCCCCeEeHHHHHHHHccc--------
Confidence 57789999999999999999997764321 1112344566677766 778999 9999998874200
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcC-CCCCCCCHHHHHHhhccC
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDA-DDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~-d~dG~is~~el~~~~~~~ 207 (430)
+ .| ....+. ....+.+..+|+.+|. |+||.|+.+||..+|...
T Consensus 139 --------~-----------~~--~~~~~~-------~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~ 182 (204)
T 3e3r_A 139 --------A-----------HP--KVRSGE-------WTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGV 182 (204)
T ss_dssp --------T-----------CH--HHHTTS-------SCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHH
T ss_pred --------c-----------CC--ccccCC-------CChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHc
Confidence 0 00 000000 1123457889999998 999999999999999753
No 433
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=98.80 E-value=1.8e-09 Score=88.72 Aligned_cols=67 Identities=16% Similarity=0.216 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC-----CCC--CCCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 174 NEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA-----PEC--PWDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 174 ~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~-----~~~--~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
+.+.+.|+.+|+.||.| ||+||.+||+.++... +.. +.....+++.+|.|+||.|+|+||+....-.
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l 84 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 84 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 34567799999999998 8999999999999752 221 1223468899999999999999999885543
No 434
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=98.80 E-value=1.8e-09 Score=84.53 Aligned_cols=66 Identities=15% Similarity=0.252 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhcCCCCC---CCCHHHHHHhhcc-----CCCCC--CCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 175 EAIDFLKGIFELFDADDDN---SLRPIEVEDLFST-----APECP--WDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 175 ~~~~~l~~~F~~fD~d~dG---~is~~el~~~~~~-----~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
.+.+.|+++|+.|| |+|| +|+.+||+.++.. .+..+ .....+++.+|.|+||.|+|+||+..+...
T Consensus 6 ~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 6 KAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 34567999999999 7777 9999999999986 33222 122457789999999999999999987644
No 435
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=98.80 E-value=1e-08 Score=90.48 Aligned_cols=98 Identities=14% Similarity=0.197 Sum_probs=77.3
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
..+.++|+.+|.|+||.|+.+|+..++... ......+++..+++.+ |.+++| |+.+||..++.
T Consensus 87 ~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~-~~~~~~~~~~~~F~~~------D~d~~G~I~~~E~~~~l~--------- 150 (191)
T 3khe_A 87 AEVDHILQSVDFDRNGYIEYSEFVTVCMDK-QLLLSRERLLAAFQQF------DSDGSGKITNEELGRLFG--------- 150 (191)
T ss_dssp HHHHHHHHHTCTTCSSSEEHHHHHHHHSCH-HHHCCHHHHHHHHHHH------CTTCSSEECHHHHHHHTT---------
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-cccchHHHHHHHHHHH------CCCCcCcCCHHHHHHHHc---------
Confidence 456788999999999999999998875322 3345678888888888 788999 99999988732
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
...++ .+.+..+|+.+|.|+||.|+.+||..++..
T Consensus 151 ---------------------------------~~~~~---~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 185 (191)
T 3khe_A 151 ---------------------------------VTEVD---DETWHQVLQECDKNNDGEVDFEEFVEMMQK 185 (191)
T ss_dssp ---------------------------------SSCCC---HHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred ---------------------------------cCCCC---HHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 00111 234778999999999999999999998865
No 436
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=98.80 E-value=1.8e-09 Score=84.44 Aligned_cols=65 Identities=11% Similarity=0.154 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHhc-CCCCC-CCCHHHHHHhhcc-CC--C-CCCCCCcccccccccCCcccchhhHHhhhhh
Q 014101 176 AIDFLKGIFELFD-ADDDN-SLRPIEVEDLFST-AP--E-CPWDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 176 ~~~~l~~~F~~fD-~d~dG-~is~~el~~~~~~-~~--~-~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
..+.|+++|+.|| +|||| .|+.+||+.++.. .+ . .+.....+++.+|.|+||.|+|+||+..+..
T Consensus 8 ~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 8 ALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4567999999999 99999 9999999999975 22 2 1123346778999999999999999988653
No 437
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=98.79 E-value=1.1e-08 Score=100.51 Aligned_cols=99 Identities=19% Similarity=0.247 Sum_probs=74.7
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
++.++|+.+|.|+||.|+.+|+..++.........++++..+++.+ |.+++| |+.+||..++..
T Consensus 339 EI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~f------DkDgdG~IS~eELr~vL~~--------- 403 (440)
T 3u0k_A 339 ELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVF------DKDGNGYISAAELRHVMTN--------- 403 (440)
T ss_dssp HHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHH------CTTCSSEECHHHHHHHHHH---------
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHH------CCCCcCcCCHHHHHHHHHH---------
Confidence 5678899999999999999999887655444444567788888888 788999 999999877542
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
+|. .++. +.+.++|+.+|.|+||.|+.+||.++|+
T Consensus 404 -------lGe------------------------~LSd---eEIdeLfke~D~DgDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 404 -------LGE------------------------KLTD---EEVDEMIREADIDGDGQVNYEEFVQMMT 438 (440)
T ss_dssp -------HTC------------------------CCCH---HHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred -------hCC------------------------CCCH---HHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence 221 1122 3477899999999999999999999885
No 438
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=98.78 E-value=1.4e-09 Score=86.36 Aligned_cols=66 Identities=15% Similarity=0.211 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhc-CCCCC-CCCHHHHHHhhcc-C----CCCC--CCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 176 AIDFLKGIFELFD-ADDDN-SLRPIEVEDLFST-A----PECP--WDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 176 ~~~~l~~~F~~fD-~d~dG-~is~~el~~~~~~-~----~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
..+.|+++|+.|| +||+| +|+.+||+.++.. . +..+ .....+++.+|.|+||.|+|+||+..+.-.
T Consensus 8 ~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 8 AMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 4567999999997 99998 9999999999974 2 2111 123457789999999999999999987643
No 439
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=98.78 E-value=2.5e-09 Score=83.71 Aligned_cols=66 Identities=11% Similarity=0.228 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhcC-CCCC-CCCHHHHHHhh-ccCCCC--CCCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 176 AIDFLKGIFELFDA-DDDN-SLRPIEVEDLF-STAPEC--PWDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 176 ~~~~l~~~F~~fD~-d~dG-~is~~el~~~~-~~~~~~--~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
..+.|+++|+.||+ |||| .|+.+||+.++ ...+.. ......+++.+|.|+||.|+|+||+..|...
T Consensus 8 ~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 8 ALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 34579999999999 9999 99999999999 544321 1333567789999999999999999987643
No 440
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=98.77 E-value=8e-10 Score=81.37 Aligned_cols=63 Identities=17% Similarity=0.181 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 177 IDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 177 ~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+.++++|+.||+|++|.|+.+||+.++...+..+ .....+++.+|.|++|.|+|+||+..|.
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp HHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 35689999999999999999999999998764322 1223566889999999999999998764
No 441
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.77 E-value=8.7e-09 Score=82.21 Aligned_cols=63 Identities=29% Similarity=0.372 Sum_probs=51.2
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHH----hcCCCCCH-----------HHHHHHHHHHHhhhcCCccCCC-cCHHhH
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVK----CFNSPLQP-----------SEIVGVKRVVQEKLREGVNERG-LTLAGF 121 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~----~~g~~~~~-----------~e~~~i~~~~~~~~~~d~~~~g-i~~~eF 121 (430)
.++++|+.||+|+||+|+.+||..++.. ++|...+. ..+..+++.+ |.+++| |+|+||
T Consensus 21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~------D~d~dG~Is~~EF 94 (103)
T 1snl_A 21 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNV------DTNQDRLVTLEEF 94 (103)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHT------CSSCSSEEEHHHH
T ss_pred CHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHc------CCCCCCcCCHHHH
Confidence 4789999999999999999999999876 56765553 2366666666 788999 999999
Q ss_pred HHHHH
Q 014101 122 LFLHA 126 (430)
Q Consensus 122 l~~~~ 126 (430)
+.++.
T Consensus 95 ~~~~~ 99 (103)
T 1snl_A 95 LASTQ 99 (103)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98754
No 442
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=98.77 E-value=7.4e-10 Score=94.91 Aligned_cols=64 Identities=8% Similarity=0.112 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 177 IDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 177 ~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
.+.++++|+.||+|+||+|+.+||+.++...+..+ .....+++.+|.|+||.|+|+||+..+.-
T Consensus 49 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~ 114 (150)
T 2jjz_A 49 LTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLG 114 (150)
T ss_dssp HHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 45688999999999999999999999998764322 22345778899999999999999998764
No 443
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=98.76 E-value=1.1e-09 Score=86.18 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHhc-CCCCC-CCCHHHHHHhhcc-CC----CCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 175 EAIDFLKGIFELFD-ADDDN-SLRPIEVEDLFST-AP----ECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 175 ~~~~~l~~~F~~fD-~d~dG-~is~~el~~~~~~-~~----~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
...+.|+++|+.|| +|||| +|+.+||+.++.. .+ ..+ .....+++.+|.|+||.|+|+||+..+.
T Consensus 9 ~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~ 82 (95)
T 2wcb_A 9 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVA 82 (95)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 34567999999999 99998 9999999999964 21 111 2234577899999999999999999865
No 444
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=98.76 E-value=4.3e-09 Score=95.62 Aligned_cols=126 Identities=10% Similarity=0.103 Sum_probs=71.3
Q ss_pred ceeEEEEeCCCCCCHHHHHHHHhCCCCCCC------cCCCccce------EEEEEEEcCC------------------Ce
Q 014101 284 NVFQCFVFGPKKAGKSVLLNSFLGRPFSDN------YTPTTDER------YAVNVVDQPG------------------GT 333 (430)
Q Consensus 284 ~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~------~~~t~~~~------~~~~~v~~~~------------------~~ 333 (430)
...+|+++|.+|||||||++++++...... ..+..+.+ .....+.++. ..
T Consensus 29 ~~~~i~i~G~~g~GKTTl~~~l~~~~~~~~~~~~i~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (221)
T 2wsm_A 29 GTVAVNIMGAIGSGKTLLIERTIERIGNEVKIGAMLGDVVSKADYERVRRFGIKAEAISTGKECHLDAHMIYHRLKKFSD 108 (221)
T ss_dssp TCEEEEEEECTTSCHHHHHHHHHHHHTTTSCEEEEECSCCCHHHHHHHHTTTCEEEECCCTTCSSCCHHHHHTTGGGGTT
T ss_pred CceEEEEEcCCCCCHHHHHHHHHHHhccCCeEEEEecCCCCchhHHHHHhCCCcEEEecCCceeecccHHHHHHHHhcCC
Confidence 457999999999999999999986521110 01110000 0001122221 12
Q ss_pred EEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc-cC
Q 014101 334 KKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF-AM 412 (430)
Q Consensus 334 ~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~-~v 412 (430)
..+.+|||+|.-... ..+...++.+++|+|+++.... ...+... . +.|+++|+||+|+.+. ..
T Consensus 109 ~d~iiidt~G~~~~~-----~~~~~~~~~~i~vvd~~~~~~~--~~~~~~~---~------~~~~iiv~NK~Dl~~~~~~ 172 (221)
T 2wsm_A 109 CDLLLIENVGNLICP-----VDFDLGENYRVVMVSVTEGDDV--VEKHPEI---F------RVADLIVINKVALAEAVGA 172 (221)
T ss_dssp CSEEEEEEEEBSSGG-----GGCCCSCSEEEEEEEGGGCTTH--HHHCHHH---H------HTCSEEEEECGGGHHHHTC
T ss_pred CCEEEEeCCCCCCCC-----chhccccCcEEEEEeCCCcchh--hhhhhhh---h------hcCCEEEEecccCCcchhh
Confidence 356788888841101 1112357889999998764321 1111111 1 4789999999999764 24
Q ss_pred cHHHHHHHHHHhC
Q 014101 413 AIQDSTRVFTFLV 425 (430)
Q Consensus 413 ~~~~~~~~~~~~g 425 (430)
..+++.+++++++
T Consensus 173 ~~~~~~~~~~~~~ 185 (221)
T 2wsm_A 173 DVEKMKADAKLIN 185 (221)
T ss_dssp CHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 5666667766653
No 445
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=98.76 E-value=6.7e-09 Score=87.69 Aligned_cols=99 Identities=9% Similarity=0.108 Sum_probs=74.7
Q ss_pred HHHHHHHhh-cCCCCCccCHHHHHHHHHHh--c---CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHH
Q 014101 58 ALKRIFILC-DHDRDGALSDAELNDFQVKC--F---NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIE 130 (430)
Q Consensus 58 ~l~~~F~~~-D~d~dG~is~~El~~~~~~~--~---g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~ 130 (430)
.+.++|..+ |.|++|.|+.+|+..++... . ......+.+..+++.+ |.+++| |+.+||..++..
T Consensus 41 ~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~I~~~el~~~l~~--- 111 (148)
T 1m45_A 41 LVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVF------DKESTGKVSVGDLRYMLTG--- 111 (148)
T ss_dssp HHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTT------CSSSSSEEEHHHHHHHHHH---
T ss_pred HHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHHh------CCCCCCcCCHHHHHHHHHH---
Confidence 577889999 99999999999999887654 2 3345667778888777 788999 999999887541
Q ss_pred cCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 131 KGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 131 ~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
+|. .++ .+.+..+|+.+|.|+||.|+.+||..++.
T Consensus 112 -------------~g~------------------------~~~---~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 112 -------------LGE------------------------KLT---DAEVDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp -------------STT------------------------CCC---HHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred -------------cCC------------------------CCC---HHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 110 111 23477899999999999999999999875
No 446
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=98.76 E-value=1.8e-08 Score=88.76 Aligned_cols=100 Identities=15% Similarity=0.083 Sum_probs=73.6
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCC------CCCHHHHH----HHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNS------PLQPSEIV----GVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~------~~~~~e~~----~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
.+.++|+.+|.|+||.|+.+|+..++...... ....+.+. .+++.+ |.+++| |+.+||..++.
T Consensus 63 ~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~Is~~El~~~l~ 136 (191)
T 1uhk_A 63 AVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIV------DKDQNGAITLDEWKAYTK 136 (191)
T ss_dssp HHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH------CTTCSSEECHHHHHHHHH
T ss_pred HHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcchhhhhhhhhHHHHHHHHHHHHHHh------cCCCCCcCcHHHHHHHHH
Confidence 68899999999999999999998876543221 11122233 667777 788999 99999988754
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
. +|. .++ .+.+..+|+.+|.|+||.|+.+|+..++..
T Consensus 137 ~----------------~g~------------------------~~~---~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~ 173 (191)
T 1uhk_A 137 A----------------AGI------------------------IQS---SEDCEETFRVCDIDESGQLDVDEMTRQHLG 173 (191)
T ss_dssp H----------------HTS------------------------CCS---HHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred H----------------hCC------------------------CCC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 2 110 011 134778999999999999999999998864
No 447
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.75 E-value=5.5e-09 Score=83.37 Aligned_cols=63 Identities=19% Similarity=0.186 Sum_probs=51.2
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 178 DFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 178 ~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
+.++.+|+.||+|++|.|+.+||+.++...+... .....++..+|.|++|.|+|+||+..+.-
T Consensus 24 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~ 88 (105)
T 1wlz_A 24 HAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSS 88 (105)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC-
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence 4588999999999999999999999998653322 22245778899999999999999988653
No 448
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=98.75 E-value=2.3e-08 Score=88.56 Aligned_cols=100 Identities=16% Similarity=0.157 Sum_probs=69.3
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCC------CCCHHHHH----HHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNS------PLQPSEIV----GVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~------~~~~~e~~----~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
.+.++|+.+|.|+||.|+.+|+..++...... ....+.+. .+++.+ |.+++| |+.+||..++.
T Consensus 67 ~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~I~~~El~~~l~ 140 (195)
T 1qv0_A 67 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF------DKDGSGTITLDEWKAYGK 140 (195)
T ss_dssp HHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHT------C----CEECHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHh------cCCCCCcCcHHHHHHHHH
Confidence 58889999999999999999998876543211 11112233 566666 778899 99999998754
Q ss_pred HHHHcCCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 127 LFIEKGRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 127 ~~~~~~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
. +|. .++ .+.+.++|+.+|.|+||.|+.+||..++..
T Consensus 141 ~----------------~g~------------------------~~~---~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 177 (195)
T 1qv0_A 141 I----------------SGI------------------------SPS---QEDCEATFRHCDLDNAGDLDVDEMTRQHLG 177 (195)
T ss_dssp H----------------HSS------------------------CCC---HHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred H----------------hCC------------------------CCC---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 2 110 011 234678999999999999999999988754
No 449
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=98.75 E-value=2.4e-09 Score=83.28 Aligned_cols=68 Identities=18% Similarity=0.245 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 174 NEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 174 ~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
+...+.++++|+.||+|++|.|+.+||+.++...+..+ .....++..+|.|++|.|+|+||+..+.-.
T Consensus 5 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~ 74 (92)
T 2kn2_A 5 TDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 74 (92)
T ss_dssp CHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 34556799999999999999999999999998764322 223457788999999999999999986543
No 450
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=98.75 E-value=1.2e-08 Score=90.10 Aligned_cols=66 Identities=15% Similarity=0.216 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCC-C------CHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSP-L------QPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~-~------~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
....|+++|+.||+|+||+|+.+||..++...+|.. + +++++..+++.+ |.+++| |+|+||+.++.
T Consensus 96 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~------D~d~dG~I~~~EF~~~~~ 169 (179)
T 3a8r_A 96 FDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEEL------DPTNLGYIEMEDLEALLL 169 (179)
T ss_dssp HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH------STTCCSEECHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHh------CCCCCCcCcHHHHHHHHH
Confidence 456899999999999999999999999987234555 5 788899999988 788999 99999999864
No 451
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=98.75 E-value=2.1e-08 Score=90.16 Aligned_cols=93 Identities=15% Similarity=0.162 Sum_probs=70.5
Q ss_pred HHhhcCCCCCccCHHHHHHHHH---------HhcCCCCCHHH-HHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHc
Q 014101 63 FILCDHDRDGALSDAELNDFQV---------KCFNSPLQPSE-IVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEK 131 (430)
Q Consensus 63 F~~~D~d~dG~is~~El~~~~~---------~~~g~~~~~~e-~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~ 131 (430)
|+.+|.|+||.|+.+|+..++. .....+...++ +..+++.+ |.+++| |+.+||..++..
T Consensus 87 f~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~Is~~El~~~l~~---- 156 (208)
T 2hpk_A 87 FLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVL------DDDGDGTVDVDELKTMMKA---- 156 (208)
T ss_dssp HHHTTCBTTTBEEGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH------CTTCSSSBCHHHHHHHHHH----
T ss_pred HHHhCCCCCCeEcHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHh------CCCCCCcCCHHHHHHHHHH----
Confidence 3999999999999999998865 33233333444 67778877 788999 999999887531
Q ss_pred CCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 132 GRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 132 ~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
+| ++. +.+..+|+.+|.|+||.|+.+||..++..
T Consensus 157 ------------~g--------------------------~~~---~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 190 (208)
T 2hpk_A 157 ------------FD--------------------------VPQ---EAAYTFFEKADTDKSGKLERTELVHLFRK 190 (208)
T ss_dssp ------------TT--------------------------SCT---THHHHHHHHHCTTCCSSBCHHHHHHHHHH
T ss_pred ------------hC--------------------------cCH---HHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 11 111 13568999999999999999999998864
No 452
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=98.75 E-value=2.4e-09 Score=84.05 Aligned_cols=63 Identities=13% Similarity=0.181 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 177 IDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 177 ~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+.++++|+.||+|+||.|+.+||+.++...+..+ .....+++.+|.|+||.|+|+||+..+.
T Consensus 28 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp HHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 35689999999999999999999999998654322 1224577889999999999999998764
No 453
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=98.74 E-value=1.7e-09 Score=78.46 Aligned_cols=60 Identities=23% Similarity=0.243 Sum_probs=49.9
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 180 LKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 180 l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
++++|+.||+|++|.|+.+||..++...+..+ .....+.+.+|.|+||.|+++||+..+.
T Consensus 3 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 67999999999999999999999998754322 1223566889999999999999998865
No 454
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=98.74 E-value=6.1e-09 Score=78.06 Aligned_cols=64 Identities=25% Similarity=0.295 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhcC-CCCC-CCCHHHHHHhhcc-CCC---CCCCCCcccccccccCCcccchhhHHhhhhh
Q 014101 177 IDFLKGIFELFDA-DDDN-SLRPIEVEDLFST-APE---CPWDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 177 ~~~l~~~F~~fD~-d~dG-~is~~el~~~~~~-~~~---~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
.+.++.+|+.||. |++| .|+.+||+.++.. .+. .+.....+++.+|.|+||.|+|+||+..|..
T Consensus 6 ~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 75 (78)
T 1cb1_A 6 PAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp HHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 3458999999999 9999 9999999999974 432 2234456778999999999999999998764
No 455
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=98.74 E-value=8.9e-09 Score=105.01 Aligned_cols=99 Identities=11% Similarity=0.249 Sum_probs=79.5
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
..+.++|+.+|.|+||.|+.+|+..++... +...+++++..+++.+ |.|++| |+.+||..++.. .
T Consensus 382 ~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~-~~~~~~~~~~~~F~~~------D~d~dG~I~~~El~~~l~~--~----- 447 (484)
T 3nyv_A 382 HEVDQVLDAVDFDKNGYIEYSEFVTVAMDR-KTLLSRERLERAFRMF------DSDNSGKISSTELATIFGV--S----- 447 (484)
T ss_dssp HHHHHHHHHHTCCTTSEEEHHHHHHHHHHH-HHHHHHHHHHHHHHHH------CTTCCSEEEHHHHHHHHHH--T-----
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHhc-cccCcHHHHHHHHHHH------CCCCCCcCCHHHHHHHHHh--c-----
Confidence 567899999999999999999998886554 3345667888888888 788999 999999887541 0
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
.++ .+.+.++|+.+|.|+||.|+.+||..++...
T Consensus 448 -----------------------------------~~~---~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~ 481 (484)
T 3nyv_A 448 -----------------------------------DVD---SETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481 (484)
T ss_dssp -----------------------------------TCC---HHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred -----------------------------------CCC---HHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence 011 2346789999999999999999999998653
No 456
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=98.74 E-value=1.3e-08 Score=87.16 Aligned_cols=64 Identities=11% Similarity=0.177 Sum_probs=57.2
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHH--HHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKR--VVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~--~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...++++|+.||+|+||+|+.+||..++.. +|.++++++++.+++ .+ |.+++| |+|+||+.++.
T Consensus 84 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~~~~~~~~~~~~------D~d~dg~i~~~eF~~~~~ 150 (159)
T 2ovk_C 84 ADEFMEAFKTFDREGQGLISSAEIRNVLKM-LGERITEDQCNDIFTFCDI------REDIDGNIKYEDLMKKVM 150 (159)
T ss_dssp HHHHHHHHHHTCTTSSSEECHHHHHHHHHH-SSSCCCHHHHHHHHHHTTC------CCCTTCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhcC------CCCCCCcEeHHHHHHHHh
Confidence 356889999999999999999999999776 588999999999999 76 678889 99999998864
No 457
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=98.73 E-value=9.4e-09 Score=86.24 Aligned_cols=63 Identities=13% Similarity=0.325 Sum_probs=57.2
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
..++++|+.||+|+||.|+.+||..++.. +|.+++++++..+++.+ |.+++| |+|+||+.++.
T Consensus 76 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~~~~~~~~~~------D~d~dg~i~~~eF~~~~~ 139 (143)
T 3j04_B 76 DVIRNAFACFDEEASGFIHEDHLRELLTT-MGDRFTDEEVDEMYREA------PIDKKGNFNYVEFTRILK 139 (143)
T ss_dssp HHHHHHHTTSCSSSCCCCCTTTHHHHHHT-SSSCCCHHHHHHHHHHT------TCCSSSCCCSTHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHH-cCCCCCHHHHHHHHHHc------CCCCCCcCcHHHHHHHHh
Confidence 57899999999999999999999999764 68899999999999998 678889 99999999864
No 458
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=98.72 E-value=2.1e-08 Score=86.55 Aligned_cols=63 Identities=14% Similarity=0.249 Sum_probs=57.3
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
..++++|+.||+|+||.|+.+||..++.. +|.+++++++..+++.+ |.+++| |+|+||+.++.
T Consensus 95 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~------D~d~dg~I~~~eF~~~~~ 158 (166)
T 2mys_B 95 DVIMGAFKVLDPDGKGSIKKSFLEELLTT-GGGRFTPEEIKNMWAAF------PPDVAGNVDYKNICYVIT 158 (166)
T ss_pred HHHHHHHHHhCCCCCcceeHHHHHHHHHH-cCCCCCHHHHHHHHHhc------CCCCCCeEeHHHHHHHHH
Confidence 57899999999999999999999999875 58889999999999998 678889 99999999865
No 459
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=98.72 E-value=9.1e-09 Score=92.09 Aligned_cols=101 Identities=8% Similarity=0.087 Sum_probs=69.2
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+.++|+.+|.|+||.|+.+|+..++... .....++.+..+++.+ |.+++| |+.+||..++....
T Consensus 94 ~~~~l~~~~D~d~~g~I~~~EF~~~~~~~-~~~~~~~~l~~~F~~~------D~d~~G~Is~~El~~~l~~~~------- 159 (197)
T 3pm8_A 94 DIHQVLRDIDSNASGQIHYTDFLAATIDK-QTYLKKEVCLIPFKFF------DIDGNGKISVEELKRIFGRDD------- 159 (197)
T ss_dssp HHHHHHHC-------CEEHHHHHHTTCCH-HHHCSHHHHHHHHHHH------CTTCSSEECHHHHHHHHC----------
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHH-HhhhhHHHHHHHHHHH------CCCCCCCCCHHHHHHHHHhcc-------
Confidence 46789999999999999999997764322 1224567888888888 788999 99999998753110
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
. . .....+.+..+|+.+|.|+||.|+.+||..+|..
T Consensus 160 ---------------------------~----~---~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 160 ---------------------------I----E---NPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp --------------------------------C---CHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred ---------------------------c----C---CCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence 0 0 0112345788999999999999999999999864
No 460
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=98.71 E-value=5.1e-08 Score=85.64 Aligned_cols=96 Identities=14% Similarity=0.168 Sum_probs=72.0
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+.++|..+|.|+||.|+.+|+..++... ....++++..+++.+ |.+++| |+.+||..++.
T Consensus 74 ~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~--~~~~~~~~~~~F~~~------D~d~~G~I~~~El~~~l~---------- 135 (180)
T 3mse_B 74 DINRILQALDINDRGNITYTEFMAGCYRW--KNIESTFLKAAFNKI------DKDEDGYISKSDIVSLVH---------- 135 (180)
T ss_dssp HHHHHHHHHCTTCCSEECHHHHHHHHSCC--TTC--CHHHHHHHHH------CTTCSSCBCHHHHHHHTT----------
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHhc--ccCCHHHHHHHHHHH------CCCCCCCCCHHHHHHHHc----------
Confidence 57789999999999999999998775432 223456788888888 778899 99999988732
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCC--------CCCCHHHHHHhhcc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDD--------NSLRPIEVEDLFST 206 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~d--------G~is~~el~~~~~~ 206 (430)
...++ .+.+.++|+.+|.|+| |.|+.+||..++..
T Consensus 136 --------------------------------~~~~~---~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 136 --------------------------------DKVLD---NNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS 178 (180)
T ss_dssp --------------------------------TSSCC---HHHHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred --------------------------------CCCCC---HHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence 00111 2347789999999999 99999999998853
No 461
>3vqt_A RF-3, peptide chain release factor 3; translation, GTPase; HET: GDP; 1.80A {Desulfovibrio vulgaris} PDB: 3vr1_A*
Probab=98.71 E-value=6.3e-08 Score=100.15 Aligned_cols=130 Identities=15% Similarity=0.075 Sum_probs=84.3
Q ss_pred eeEEEEeCCCCCCHHHHHHHHhCCC------------------CCC----CcCCCccceEEEEEEEcCCCeEEEEEEeCC
Q 014101 285 VFQCFVFGPKKAGKSVLLNSFLGRP------------------FSD----NYTPTTDERYAVNVVDQPGGTKKTVVLREI 342 (430)
Q Consensus 285 ~~kI~vvG~~~vGKSSLi~~l~~~~------------------~~~----~~~~t~~~~~~~~~v~~~~~~~~~~i~d~~ 342 (430)
.-+|+|+|..++|||||..+++... +.. .....++.......+.+. ...+.++||+
T Consensus 31 ~RNiaIiaHvdaGKTTLtE~lL~~tG~i~~~G~V~~~~~~~~~~~D~~~~EreRGITI~s~~~~~~~~--~~~iNlIDTP 108 (548)
T 3vqt_A 31 RRTFAIISHPDAGKTTLTEKLLLFGGAIQMAGSVKARKAARHATSDWMAMERERGISVTTSVMQFPYR--DRVVNLLDTP 108 (548)
T ss_dssp EEEEEEECCTTSSHHHHHHHHHHHTTCHHHHHHHHHC--------------------CTTTEEEEEET--TEEEEEECCC
T ss_pred cceEEEEeCCCCCHHHHHHHHHHhcCcccccceeecCccccccccCChHHHHHCCCcEeeceEEEEEC--CEEEEEEeCC
Confidence 3489999999999999999996110 000 001122222333445555 3678899999
Q ss_pred ChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCccCcHHHHHHHHH
Q 014101 343 PEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFAMAIQDSTRVFT 422 (430)
Q Consensus 343 G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~v~~~~~~~~~~ 422 (430)
|+..|..-. ...++-+|++|+|+|+..--.-+...-| +....+ ++|+++++||+|+..... ..-..++.+
T Consensus 109 GHvDF~~Ev--~raL~~~DgAvlVvda~~GV~~qT~~v~-~~a~~~------~lp~i~fINK~Dr~~ad~-~~~~~~i~~ 178 (548)
T 3vqt_A 109 GHQDFSEDT--YRVLTAVDSALVVIDAAKGVEAQTRKLM-DVCRMR------ATPVMTFVNKMDREALHP-LDVMADIEQ 178 (548)
T ss_dssp CGGGCSHHH--HHHHHSCSEEEEEEETTTBSCHHHHHHH-HHHHHT------TCCEEEEEECTTSCCCCH-HHHHHHHHH
T ss_pred CcHHHHHHH--HHHHHhcCceEEEeecCCCcccccHHHH-HHHHHh------CCceEEEEecccchhcch-hHhhhhhhh
Confidence 998888766 6778999999999999874333333334 444443 699999999999977432 334444444
Q ss_pred HhCC
Q 014101 423 FLVM 426 (430)
Q Consensus 423 ~~g~ 426 (430)
.++.
T Consensus 179 ~l~~ 182 (548)
T 3vqt_A 179 HLQI 182 (548)
T ss_dssp HHTS
T ss_pred hcCC
Confidence 4543
No 462
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=98.70 E-value=2.3e-08 Score=89.94 Aligned_cols=66 Identities=15% Similarity=0.199 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHH----HHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGV----KRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i----~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
....++++|+.||+|+||+|+.+||..++..+.|.++++++++.+ ++.+ |.+++| |+|+||+.++.
T Consensus 111 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~------D~d~dG~Is~~EF~~~~~ 181 (208)
T 2ct9_A 111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEA------DQDGDSAISFTEFVKVLE 181 (208)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHH------CSSSSSSEEHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHh------CCCCCCcCcHHHHHHHHh
Confidence 567899999999999999999999999988777999999999988 6666 678889 99999998753
No 463
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=98.70 E-value=2e-09 Score=81.55 Aligned_cols=62 Identities=18% Similarity=0.242 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHhhccCC-CCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 177 IDFLKGIFELFDADDDNSLRPIEVEDLFSTAP-ECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 177 ~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~-~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
.+.++ +|+.||.|++|.|+.+||+.++...+ ..+ .....++..+|.|++|.|+|+||+..+.
T Consensus 8 ~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 72 (81)
T 1c7v_A 8 EEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 72 (81)
T ss_dssp HHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 45689 99999999999999999999998765 322 1223566889999999999999998865
No 464
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=98.70 E-value=2e-09 Score=90.49 Aligned_cols=66 Identities=11% Similarity=-0.028 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCCCCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 175 EAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECPWDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 175 ~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
+..+.++++|+.|| |+||+|+.+|++.+|...+........+.+.+|.|+||.|+|+||+..+.+.
T Consensus 48 ~e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li 113 (139)
T 2jq6_A 48 KDKPTYDEIFYTLS-PVNGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLI 113 (139)
T ss_dssp GTHHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 44667999999999 9999999999999998754221233457788999999999999999886543
No 465
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=98.69 E-value=1.9e-08 Score=103.20 Aligned_cols=98 Identities=12% Similarity=0.174 Sum_probs=78.2
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
..++++|+.+|.|+||.|+.+|+..++... +....++++..+++.+ |.|++| |+.+||..++.
T Consensus 399 ~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~-~~~~~~~~~~~~F~~~------D~d~dG~Is~~El~~~l~--------- 462 (504)
T 3q5i_A 399 EEVDNILKEVDFDKNGYIEYSEFISVCMDK-QILFSEERLRRAFNLF------DTDKSGKITKEELANLFG--------- 462 (504)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHSCH-HHHTCHHHHHHHHHHH------CTTCCSEECHHHHHHHTT---------
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHhh-hcccCHHHHHHHHHHh------cCCCCCcCcHHHHHHHHh---------
Confidence 467889999999999999999998875432 3345678888888888 788999 99999987732
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
. ..++ .+.+.++|+.+|.||||.|+.+||..++..
T Consensus 463 -------------------------~--------~~~~---~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 497 (504)
T 3q5i_A 463 -------------------------L--------TSIS---EKTWNDVLGEADQNKDNMIDFDEFVSMMHK 497 (504)
T ss_dssp -------------------------C--------SCCC---HHHHHHHHHTTCSSCSSSEEHHHHHHHHHH
T ss_pred -------------------------h--------CCCC---HHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 0 0111 234788999999999999999999999875
No 466
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=98.69 E-value=5.4e-08 Score=103.37 Aligned_cols=120 Identities=20% Similarity=0.133 Sum_probs=73.3
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCCCc-CCCccc-----------------------------------------
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSDNY-TPTTDE----------------------------------------- 320 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~~~-~~t~~~----------------------------------------- 320 (430)
....+|+|+|.+++|||||+|++++..+-+.. .+++..
T Consensus 49 i~lp~I~vvG~~saGKSSllnaL~g~~~LP~g~g~~Tr~Pl~l~l~~~~~~~~~~l~~~~~~~~~~~~v~~~I~~~~~~~ 128 (772)
T 3zvr_A 49 LDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEYAEFLHCKGKKFTDFEEVRLEIEAETDRV 128 (772)
T ss_dssp GCCSEEEEEECTTTCHHHHHHHHHSSCCSCCSSSCSCSSCEEEEEEECSSCEEECSTTTTCCBCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHhCCCccCcCCccccccceEEEeecCCcchhheeccCCcccCCHHHHHHHHHHHHhhh
Confidence 34569999999999999999999998763222 111100
Q ss_pred ---------eEEEEEEEcCCCeEEEEEEeCCChh-------------HHHhhhcccccc-ccccEEEEEEECCChhhHHH
Q 014101 321 ---------RYAVNVVDQPGGTKKTVVLREIPEE-------------AVAKLLSNKDSL-AACDIAVFVHDSSDESSWKR 377 (430)
Q Consensus 321 ---------~~~~~~v~~~~~~~~~~i~d~~G~e-------------~~~~~~~~~~~~-~~ad~vilv~D~t~~~S~~~ 377 (430)
......+..+ ....+.++||+|-. ....+. ..++ ..+|++++|+|+++.-.-..
T Consensus 129 ~g~~~~is~~~i~l~I~~P-~~~qL~LVDTPGi~~~~~~~qp~di~~~i~~lv--~~yi~~~aDlIL~VVDAs~~~~~~d 205 (772)
T 3zvr_A 129 TGTNKGISPVPINLRVYSP-HVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDML--MQFVTKENCLILAVSPANSDLANSD 205 (772)
T ss_dssp HCSTTCCCSCCEEEEEEET-TCCSEEEEECCCCCCCCSSCCCCHHHHHHHHHH--HHHHTSTTEEEEEEEETTSCSSSCH
T ss_pred cCCCCcccccceEEEEecC-CCCceEEEECCCcccCCCCCCcHHHHHHHHHHH--HHHHhcCCcEEEEEEcCCCCcchhH
Confidence 0001112222 12246689999932 233333 2333 67899999999986433222
Q ss_pred HHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCcc
Q 014101 378 ATELLVEVASYGEDTGFEVPCLIVAAKDDLDSFA 411 (430)
Q Consensus 378 ~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~~ 411 (430)
...++..+... +.|+++|.||+|+.+..
T Consensus 206 ~l~ll~~L~~~------g~pvIlVlNKiDlv~~~ 233 (772)
T 3zvr_A 206 ALKIAKEVDPQ------GQRTIGVITKLDLMDEG 233 (772)
T ss_dssp HHHHHHHHCTT------CSSEEEEEECTTSSCTT
T ss_pred HHHHHHHHHhc------CCCEEEEEeCcccCCcc
Confidence 22334444322 68999999999998643
No 467
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.69 E-value=2.8e-08 Score=74.28 Aligned_cols=59 Identities=15% Similarity=0.080 Sum_probs=48.0
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHH-hhhcCCccCCC-cCHHhHHHHH
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQ-EKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~-~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
..+|+++|+.| +|++|+|+.+||+. .+++++++.|++.++ .+.+ .+++| |+|++|+.+|
T Consensus 9 ~eel~eAFr~f-~dg~G~It~~eLr~--------~lt~eevd~~i~~~d~~dg~--~~~dG~idY~eF~~~m 69 (75)
T 1h8b_A 9 AEQVIASFRIL-ASDKPYILAEELRR--------ELPPDQAQYCIKRMPAYSGP--GSVPGALDYAAFSSAL 69 (75)
T ss_dssp HHHHHHHHHHH-TTSCSSBCHHHHHH--------HSCHHHHHHHHHHSCSCCCS--SCCTTCBCHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCCCcCHHHHHh--------cCCHHHHHHHHHhcCcccCC--CCCCCcCcHHHHHHHH
Confidence 35899999999 99999999999986 389999999999984 1111 02467 9999999875
No 468
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=98.69 E-value=1.8e-08 Score=103.14 Aligned_cols=99 Identities=15% Similarity=0.231 Sum_probs=78.7
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
..++++|+.+|.|+||.|+.+|+..++... +...+.+++..+++.+ |.+++| |+++||..++..
T Consensus 390 ~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~-~~~~~~~~~~~~F~~~------D~d~~G~Is~~El~~~l~~-------- 454 (494)
T 3lij_A 390 SEVDAILGAADFDRNGYIDYSEFVTVAMDR-KSLLSKDKLESAFQKF------DQDGNGKISVDELASVFGL-------- 454 (494)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHSCH-HHHTCHHHHHHHHHHH------CTTCSSEECHHHHHHHC-C--------
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHhh-hccccHHHHHHHHHHH------CCCCCCcCCHHHHHHHHHh--------
Confidence 567899999999999999999998875432 3345778888888888 788999 999999887320
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
. .++ .+.+.++|+.+|.||||.|+.+||..++...
T Consensus 455 -------------------~---------------~~~---~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 489 (494)
T 3lij_A 455 -------------------D---------------HLE---SKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 489 (494)
T ss_dssp -------------------C---------------SCC---CHHHHHHHHTTCSSSSSSEEHHHHHHHHHHH
T ss_pred -------------------c---------------CCC---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHhh
Confidence 0 011 1346789999999999999999999998753
No 469
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=98.69 E-value=2.6e-08 Score=84.83 Aligned_cols=100 Identities=9% Similarity=0.047 Sum_probs=77.7
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNS-PLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~-~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
.+.++ +.+|.|++|.|+.+|+..++...... ....+++..+++.+ |.+++| |+.+||..++..
T Consensus 48 ~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~------D~d~~G~I~~~el~~~l~~-------- 112 (156)
T 1wdc_C 48 DVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTF------DREGQGFISGAELRHVLTA-------- 112 (156)
T ss_dssp HHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTT------CSSSSSEEEHHHHHHHHHH--------
T ss_pred HHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHH--------
Confidence 45556 88999999999999999987766543 55677788888777 788999 999999887541
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHhhccC
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFEL--FDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~--fD~d~dG~is~~el~~~~~~~ 207 (430)
+|. .++ .+.+..+|+. +|.|+||.|+.+||..++...
T Consensus 113 --------~g~------------------------~~~---~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_C 113 --------LGE------------------------RLS---DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151 (156)
T ss_dssp --------SSS------------------------CCC---HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred --------cCC------------------------CCC---HHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence 110 111 2347789999 999999999999999998764
No 470
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=98.68 E-value=9.3e-09 Score=81.71 Aligned_cols=64 Identities=13% Similarity=0.127 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC-----C----CCCCCCCcccccccccCCcccchhhHHhhhh
Q 014101 175 EAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA-----P----ECPWDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 175 ~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~-----~----~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
...+.|+++|+.||.+ +|+|+.+||+.++... + ........+++.+|.|+||.|+|+||+..+.
T Consensus 7 ~~~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~ 79 (100)
T 1psr_A 7 RSIIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLG 79 (100)
T ss_dssp HHHHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 3456799999999976 8999999999999741 1 1223345688899999999999999998864
No 471
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=98.68 E-value=2.6e-10 Score=104.17 Aligned_cols=30 Identities=17% Similarity=0.301 Sum_probs=25.6
Q ss_pred CceeEEEEeCCCCCCHHHHHHHHhCCCCCC
Q 014101 283 RNVFQCFVFGPKKAGKSVLLNSFLGRPFSD 312 (430)
Q Consensus 283 ~~~~kI~vvG~~~vGKSSLi~~l~~~~~~~ 312 (430)
...++|+|+|.+|||||||+++|+...+..
T Consensus 36 ~~~~~i~ivG~~gvGKTtl~~~l~~~~~~~ 65 (226)
T 2hf9_A 36 HGVVAFDFMGAIGSGKTLLIEKLIDNLKDK 65 (226)
T ss_dssp TTCEEEEEEESTTSSHHHHHHHHHHHHTTT
T ss_pred CCCeEEEEEcCCCCCHHHHHHHHHHHhccC
Confidence 456899999999999999999999775543
No 472
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=98.68 E-value=2.8e-08 Score=84.51 Aligned_cols=62 Identities=18% Similarity=0.298 Sum_probs=56.1
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
..++++|+.||+|+||.|+.+||..++.. +|.+++++++..+++.+ |. ++| |+|+||+.++.
T Consensus 85 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~------d~-~dg~I~~~eF~~~~~ 147 (153)
T 2ovk_B 85 DALRNAFSMFDEDGQGFIPEDYLKDLLEN-MGDNFSKEEIKNVWKDA------PL-KNKQFNYNKMVDIKG 147 (153)
T ss_dssp THHHHHHHTTCSSCSSCCCHHHHHHHHHH-SSSCCCHHHHHHHHHHC------CE-ETTEECHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHH-cCCCCCHHHHHHHHHHc------CC-CCCEEeHHHHHHHHh
Confidence 47899999999999999999999999776 58899999999999998 67 788 99999999864
No 473
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=98.67 E-value=3.2e-09 Score=85.14 Aligned_cols=64 Identities=23% Similarity=0.296 Sum_probs=56.8
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhc--CCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCF--NSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~--g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
..++++|+.||+|+||+|+.+||..++..+. |.++++++++.+++.+ |.+++| |+|+||+.+++
T Consensus 41 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~------D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 41 SQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAA------DHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp SSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCTTTTHHHHTTT------CCSSSSCCCSSHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCHHHHHHHHHHh------CCCCCCcCCHHHHHHHHh
Confidence 4688999999999999999999999988764 7889999999999887 678889 99999998753
No 474
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=98.67 E-value=5.2e-09 Score=85.19 Aligned_cols=66 Identities=15% Similarity=0.171 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHhc-CCCCC-CCCHHHHHHhhc-cCCCC---C-CC---CCcccccccccCCcccchhhHHhhhhhh
Q 014101 176 AIDFLKGIFELFD-ADDDN-SLRPIEVEDLFS-TAPEC---P-WD---EAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 176 ~~~~l~~~F~~fD-~d~dG-~is~~el~~~~~-~~~~~---~-~~---~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
..+.|+++|+.|| +|+|| +|+.+||+.++. ..+.. + .+ ...+++.+|.|+||.|+|+||+..+...
T Consensus 10 ~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 85 (113)
T 1xk4_C 10 NIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARL 85 (113)
T ss_dssp HHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 4567999999999 59999 999999999998 44421 1 12 2457789999999999999999887644
No 475
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=98.67 E-value=3.8e-08 Score=82.19 Aligned_cols=63 Identities=19% Similarity=0.247 Sum_probs=56.3
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...++++|+.||+|+||.|+.+||..++..+ |.+++++++..+++.+ |. ++| |+|+||+.++.
T Consensus 75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-g~~~~~~~~~~~~~~~------d~-~dg~i~~~eF~~~~~ 138 (140)
T 1ggw_A 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSL-GEKLSNEEMDELLKGV------PV-KDGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHH-HSCSCHHHHHHHHHHT------TC-SSCCSTTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc-CCCCCHHHHHHHHHhc------cC-CCCcEeHHHHHHHHh
Confidence 4689999999999999999999999998764 8889999999999998 56 778 99999998753
No 476
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=98.65 E-value=8.6e-08 Score=83.00 Aligned_cols=66 Identities=21% Similarity=0.256 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFI 129 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~ 129 (430)
....++++|+.||+|+||.|+.+||..++... | +++++++.+++.+ |.+++| |+|+||+.++..+.
T Consensus 92 ~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-g--~~~~~~~~~~~~~------D~d~dg~i~~~ef~~~~~~~~ 158 (174)
T 1q80_A 92 VEGPLPLFFRAVDTNEDNNISRDEYGIFFGML-G--LDKTMAPASFDAI------DTNNDGLLSLEEFVIAGSDFF 158 (174)
T ss_dssp HHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH-T--CCGGGHHHHHHHH------CTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc-C--CCHHHHHHHHHHh------CCCCCceEeHHHHHHHHHHHh
Confidence 34678999999999999999999999998776 5 7899999999998 678889 99999999886544
No 477
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=98.65 E-value=2.5e-08 Score=83.59 Aligned_cols=65 Identities=20% Similarity=0.384 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 55 CVRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 55 ~~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
....++++|+.+|+|+||.|+.+||..++.. +|.+++++++..+++.+ |.+++| |+|+||+.++.
T Consensus 74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~g~~~~~~~~~~~~~~~------d~~~dg~i~~~eF~~~~~ 139 (145)
T 2bl0_B 74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLN-LGDALTSSEVEELMKEV------SVSGDGAINYESFVDMLV 139 (145)
T ss_dssp GHHHHHHHHHHHCSSSSSEEEHHHHHHHHHH-SSSCCCHHHHHHHHTTC------CCCTTSEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH-cCCCCCHHHHHHHHHHc------CCCCCCcEeHHHHHHHHH
Confidence 4568999999999999999999999999775 58889999999999887 678889 99999999864
No 478
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=98.64 E-value=9.7e-09 Score=76.51 Aligned_cols=63 Identities=22% Similarity=0.297 Sum_probs=51.7
Q ss_pred HHHHHHHHHh-cCCCC-CCCCHHHHHHhhccCCC----CCCCCCcccccccccCCcccchhhHHhhhhh
Q 014101 178 DFLKGIFELF-DADDD-NSLRPIEVEDLFSTAPE----CPWDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 178 ~~l~~~F~~f-D~d~d-G~is~~el~~~~~~~~~----~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
+.++++|+.| |+|++ |.|+.+||+.++...+. .+.....+++.+|.|++|.|+|+||+..|.-
T Consensus 5 ~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 4588999999 99999 99999999999976432 2223345778899999999999999998754
No 479
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=98.64 E-value=1e-09 Score=79.63 Aligned_cols=60 Identities=13% Similarity=0.159 Sum_probs=48.3
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhh
Q 014101 180 LKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 180 l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
++++|+.||.|++|.|+.+||..++...+..+ .....+.+.+|.|+||.|+++||+..|.
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 45899999999999999999999987642111 1223466789999999999999998865
No 480
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=98.64 E-value=6.3e-09 Score=81.03 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhc-CCCCC-CCCHHHHHHhhcc-----CCCCC--CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 176 AIDFLKGIFELFD-ADDDN-SLRPIEVEDLFST-----APECP--WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 176 ~~~~l~~~F~~fD-~d~dG-~is~~el~~~~~~-----~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
..+.++++|+.|| +|++| .|+.+||+.++.. .+..+ .....+++.+|.|+||.|+|+||+..|.-
T Consensus 7 ~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 80 (93)
T 1k2h_A 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3466899999999 79999 9999999999875 43222 22345778899999999999999998753
No 481
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.64 E-value=7.1e-09 Score=110.93 Aligned_cols=124 Identities=11% Similarity=0.116 Sum_probs=86.3
Q ss_pred hhcCCCCCccCHHHHHHHHHHhcCCCCC-HHHHHHHHHHHHhh-hcCCccCCC-cCHHhHHHHHHHHHHcCCchhHHHHH
Q 014101 65 LCDHDRDGALSDAELNDFQVKCFNSPLQ-PSEIVGVKRVVQEK-LREGVNERG-LTLAGFLFLHALFIEKGRLETTWTVL 141 (430)
Q Consensus 65 ~~D~d~dG~is~~El~~~~~~~~g~~~~-~~e~~~i~~~~~~~-~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~~w~~l 141 (430)
.||+|+||.|+.+||..++.. ..+ ..++..+++.++.. ...|.+++| |+|+||+.+++...
T Consensus 163 ~fd~n~dG~Is~kEl~~~l~~----~~~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~------------ 226 (816)
T 3qr0_A 163 TTVEMEKNKIPVKAIQKCLSK----DKDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL------------ 226 (816)
T ss_dssp HHTSCCSSEEEHHHHHHHHCS----CHHHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC------------
T ss_pred hccCCCCCCCCHHHHHHHHHh----cCChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC------------
Confidence 479999999999999876432 111 24455665555210 112566778 99999999976311
Q ss_pred HhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--C-------
Q 014101 142 RKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--W------- 212 (430)
Q Consensus 142 ~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~------- 212 (430)
+ .++++++|+.||.||+|.||. ||+..+......+ +
T Consensus 227 ----------------~------------------R~EI~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~ 271 (816)
T 3qr0_A 227 ----------------E------------------RSEIEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLY 271 (816)
T ss_dssp ----------------C------------------CTHHHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCC
T ss_pred ----------------C------------------HHHHHHHHHHHccCCCCcccH-HHHHHHHHhCCcccccccccccc
Confidence 0 124789999999999999999 9999998754332 1
Q ss_pred C---CCcccccccc--c----CCcccchhhHHhhhh
Q 014101 213 D---EAPYKDAAEK--T----ALGGLSLDGFLSEWA 239 (430)
Q Consensus 213 ~---~~~~~~~~d~--~----~dg~i~~~ef~~~w~ 239 (430)
+ +..+++.++. | ++|.|++++|.....
T Consensus 272 t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~ 307 (816)
T 3qr0_A 272 TDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLM 307 (816)
T ss_dssp CHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHH
T ss_pred CHHHHHHHHHHhccccchhhhccCCccHHHHHHHhh
Confidence 1 2345556665 5 789999999997743
No 482
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=98.64 E-value=1.1e-08 Score=80.72 Aligned_cols=66 Identities=20% Similarity=0.204 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhc-CCCCC-CCCHHHHHHhhcc-CC------CCCCCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 176 AIDFLKGIFELFD-ADDDN-SLRPIEVEDLFST-AP------ECPWDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 176 ~~~~l~~~F~~fD-~d~dG-~is~~el~~~~~~-~~------~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
..+.++.+|+.|| +||+| .|+.+||+.++.. .+ ..+.....+++.+|.|+||.|+|+||+..|...
T Consensus 11 ~~~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~ 85 (99)
T 1qls_A 11 CIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 85 (99)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3457899999998 99999 9999999999973 32 111223457788999999999999999987643
No 483
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=98.63 E-value=2.2e-08 Score=102.27 Aligned_cols=100 Identities=14% Similarity=0.224 Sum_probs=68.5
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCch
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLE 135 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~ 135 (430)
..+.++|+.+|.|+||.|+.+|+..++.. .......+++..+++.+ |.|++| |+.+||..++...
T Consensus 381 ~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~------D~d~dG~Is~~El~~~l~~~------- 446 (486)
T 3mwu_A 381 DQIDSLMPLLDMDGSGSIEYSEFIASAID-RTILLSRERMERAFKMF------DKDGSGKISTKELFKLFSQA------- 446 (486)
T ss_dssp HHHHHHHHHHCTTCCSSBCHHHHHHHHSC-TTTTCCHHHHHHHHHHH------CSSCSSSBCSSCC--------------
T ss_pred HHHHHHHHHhcCCCCCcCcHHHHHHHHHh-hhccchHHHHHHHHHHh------CCCCCCcCCHHHHHHHHHHc-------
Confidence 35678999999999999999999776443 24445778888888888 788999 9999998775311
Q ss_pred hHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 136 TTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 136 ~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
|. .+ ..+.+.++|+.+|.|+||.|+.+||.+++..
T Consensus 447 ---------g~------------------------~~---~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 481 (486)
T 3mwu_A 447 ---------DS------------------------SI---QMEELESIIEQVDNNKDGEVDFNEFVEMLQN 481 (486)
T ss_dssp -------------------------------------------------CCCCSSCSSSBCHHHHHHHHHH
T ss_pred ---------CC------------------------CC---CHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 10 00 1123668999999999999999999998864
No 484
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=98.62 E-value=6.6e-09 Score=83.42 Aligned_cols=67 Identities=9% Similarity=0.081 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC--CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 174 NEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTAPECP--WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 174 ~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
+...+.++.+|+.||+||||.|+.+||..++...+..+ .....++..+|.|++|.|+|+||+..|.-
T Consensus 28 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~ 96 (107)
T 2d58_A 28 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLG 96 (107)
T ss_dssp HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 45567799999999999999999999999998764332 12245667899999999999999988653
No 485
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.62 E-value=2.7e-08 Score=88.23 Aligned_cols=98 Identities=18% Similarity=0.273 Sum_probs=75.4
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+.++|+.+|.|+||.|+.+|+..++... ......+.+..+++.+ |.+++| |+.+||..++.
T Consensus 47 ~~~~l~~~~D~d~dG~I~~~EF~~~~~~~-~~~~~~~~l~~~F~~~------D~d~dG~Is~~El~~~l~---------- 109 (188)
T 1s6i_A 47 EIKDLMDAADIDKSGTIDYGEFIAATVHL-NKLEREENLVSAFSYF------DKDGSGYITLDEIQQACK---------- 109 (188)
T ss_dssp HHHHHHHHTCTTCSSEECHHHHHHHHTTS-SSSCCCCSTHHHHHHT------TTTCSSEEEHHHHHHTTT----------
T ss_pred HHHHHHHHcCCCCCCeEeHHHHHHHHHHH-hccCHHHHHHHHHHHH------CCCCCCcCcHHHHHHHHH----------
Confidence 56789999999999999999998875432 3233456678888887 678899 99999987632
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhccC
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFSTA 207 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~~ 207 (430)
.+| ++. +.+..+|+.+|.|+||.|+.+||..++...
T Consensus 110 ------~~g--------------------------~~~---~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 145 (188)
T 1s6i_A 110 ------DFG--------------------------LDD---IHIDDMIKEIDQDNDGQIDYGEFAAMMRKR 145 (188)
T ss_dssp ------TTT--------------------------CCT---THHHHHHHHHCSSSSSEEETTHHHHTTSCC
T ss_pred ------HcC--------------------------CCH---HHHHHHHHHHCCCCCCcEeHHHHHHHHHHc
Confidence 000 111 136789999999999999999999998653
No 486
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=98.62 E-value=2.1e-07 Score=78.16 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=75.3
Q ss_pred HHHHHHHhh---cCCCCCccCHHHHHHHHHHh--cCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHc
Q 014101 58 ALKRIFILC---DHDRDGALSDAELNDFQVKC--FNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEK 131 (430)
Q Consensus 58 ~l~~~F~~~---D~d~dG~is~~El~~~~~~~--~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~ 131 (430)
.+.++|+.+ |.|+ |.|+.+|+..++... ...+.....+..+++.+ |.+++| |+.+||..++..
T Consensus 45 ~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~------D~d~~G~i~~~el~~~l~~---- 113 (149)
T 2mys_C 45 EINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVF------DKEGNGTVMGAELRHVLAT---- 113 (149)
T ss_pred HHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHh------CCCCCceEcHHHHHHHHHH----
Confidence 567788888 9999 999999999887665 34455667777888887 678899 999999887542
Q ss_pred CCchhHHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 132 GRLETTWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 132 ~~~~~~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
+|. .++ .+.+..+|+. |.|+||.|+.+||..++.
T Consensus 114 ------------~g~------------------------~~~---~~~~~~~~~~-d~~~dg~i~~~eF~~~~~ 147 (149)
T 2mys_C 114 ------------LGE------------------------KMT---EEEVEELMKG-QEDSNGCINYEAFVKHIM 147 (149)
T ss_pred ------------hCC------------------------CCC---HHHHHHHHhh-CCCCCCcEeHHHHHHHHh
Confidence 110 111 2346789999 999999999999999875
No 487
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=98.62 E-value=8.4e-08 Score=96.10 Aligned_cols=99 Identities=18% Similarity=0.231 Sum_probs=76.0
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.++++|+.+|.|+||.|+.+|+..++..........+++..+++.+ |.+++| |+.+||..++..
T Consensus 349 el~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~f------D~D~dG~Is~eELr~~L~~--------- 413 (450)
T 3sg6_A 349 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVF------DKDGNGYISAAELRHVMTN--------- 413 (450)
T ss_dssp HHHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHH------CTTCSSEECHHHHHHHHHH---------
T ss_pred HHHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHh------CCCCCCeEeHHHHHHHHHH---------
Confidence 5678899999999999999999988765555556677888888888 788899 999999887542
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFS 205 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~ 205 (430)
+|. .++ .+.+..+|+.+|.|+||.|+.+||..+|.
T Consensus 414 -------lG~------------------------~ls---~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 414 -------LGE------------------------KLT---DEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp -------HTC------------------------CCC---HHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred -------hCC------------------------CCC---HHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 111 111 23467899999999999999999999885
No 488
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=98.61 E-value=5e-08 Score=83.19 Aligned_cols=62 Identities=13% Similarity=0.219 Sum_probs=56.1
Q ss_pred HHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 57 RALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 57 ~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
..++.+|+.||+|++|.|+.+||..++.. +|.+++++++..+++.+ |.+ +| |+|+||+.++.
T Consensus 87 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~------d~~-dg~i~~~eF~~~~~ 149 (156)
T 1wdc_B 87 ETIRNAFAMFDEQETKKLNIEYIKDLLEN-MGDNFNKDEMRMTFKEA------PVE-GGKFDYVKFTAMIK 149 (156)
T ss_dssp HHHHHHHHTTCTTCCSCEEHHHHHHHHHH-SSSCCCHHHHHHHHHHC------CEE-TTEECHHHHHHHHH
T ss_pred HHHHHHHHHHCcCCCCccCHHHHHHHHHH-hCCCCCHHHHHHHHHhc------CCC-CCEEeHHHHHHHHh
Confidence 46899999999999999999999999876 58899999999999998 677 88 99999999864
No 489
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=98.61 E-value=2.2e-08 Score=85.01 Aligned_cols=64 Identities=19% Similarity=0.205 Sum_probs=48.7
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhc-------CCCCCHHHHHHHH----HHHHhhhcCCccCCC-cCHHhHHH
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCF-------NSPLQPSEIVGVK----RVVQEKLREGVNERG-LTLAGFLF 123 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~-------g~~~~~~e~~~i~----~~~~~~~~~d~~~~g-i~~~eFl~ 123 (430)
...++++|+.||+|+||+|+.+||..++..++ |..++.+++..++ +.+ |.+++| |+|+||+.
T Consensus 67 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~------D~d~dG~Is~~EF~~ 140 (143)
T 3a4u_B 67 QELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDD------DKNNDGYIDYAEFAK 140 (143)
T ss_dssp HHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHH------CTTCSSEECHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHc------CCCCCCcEeHHHHHH
Confidence 35788999999999999999999999876653 3578899997776 555 678899 99999987
Q ss_pred HH
Q 014101 124 LH 125 (430)
Q Consensus 124 ~~ 125 (430)
++
T Consensus 141 ~~ 142 (143)
T 3a4u_B 141 SL 142 (143)
T ss_dssp --
T ss_pred HH
Confidence 64
No 490
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=98.60 E-value=3.7e-09 Score=79.44 Aligned_cols=62 Identities=18% Similarity=0.228 Sum_probs=50.3
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHhhccCCCCC-CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 179 FLKGIFELFDADDDNSLRPIEVEDLFSTAPECP-WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 179 ~l~~~F~~fD~d~dG~is~~el~~~~~~~~~~~-~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
.++.+|+.||+||+|.|+.+||..++...+..+ .....+.+.+|.|+||.|+|+||+..+.-
T Consensus 4 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 4 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNA 66 (78)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHHHTCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 478999999999999999999999998654111 12245668899999999999999987653
No 491
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=98.60 E-value=2.9e-08 Score=88.58 Aligned_cols=63 Identities=10% Similarity=0.174 Sum_probs=56.9
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHH
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHA 126 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~ 126 (430)
...++++|+.||+|+||+|+.+||..++ .+|..++.+++..|+..+ |.+++| |+|+||+.++.
T Consensus 125 ~~~l~~~F~~~D~d~~G~Is~~El~~~l--~~g~~~~~~~~~~l~~~~------D~d~dG~I~~~EF~~~l~ 188 (196)
T 3dtp_E 125 EDVIVNAFNLFDEGDGKCKEETLKRSLT--TWGEKFSQDEVDQALSEA------PIDGNGLIDIKKFAQILT 188 (196)
T ss_dssp HHHHHHHHHTTCSSSSCCBHHHHHHHHH--HSSSCCCHHHHHHHHHSS------CEETTEECHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHH--HcCCCCCHHHHHHHHHHc------CCCCCCEEeHHHHHHHHH
Confidence 3578999999999999999999999998 468999999999999988 778899 99999999853
No 492
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=98.60 E-value=4.5e-08 Score=95.70 Aligned_cols=60 Identities=12% Similarity=0.123 Sum_probs=35.2
Q ss_pred EEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCC
Q 014101 334 KKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDS 409 (430)
Q Consensus 334 ~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~ 409 (430)
..+.++||+|-.... ......+|++++|+|+++......+.. .+ . ..|.++|+||+|+.+
T Consensus 167 ~~~iliDT~Gi~~~~-----~~l~~~~d~vl~V~d~~~~~~~~~i~~---~i---l-----~~~~ivVlNK~Dl~~ 226 (349)
T 2www_A 167 YDIILIETVGVGQSE-----FAVADMVDMFVLLLPPAGGDELQGIKR---GI---I-----EMADLVAVTKSDGDL 226 (349)
T ss_dssp CSEEEEECCCC--CH-----HHHHTTCSEEEEEECCC------------------C-----CSCSEEEECCCSGGG
T ss_pred CCEEEEECCCcchhh-----hhHHhhCCEEEEEEcCCcchhHHHhHH---HH---H-----hcCCEEEEeeecCCC
Confidence 356789999953111 233578999999999986543222211 11 1 468899999999975
No 493
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.60 E-value=1.2e-08 Score=81.40 Aligned_cols=60 Identities=22% Similarity=0.236 Sum_probs=48.1
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHhhcc-----CCCCCCC-------------CCcccccccccCCcccchhhHHhhhh
Q 014101 180 LKGIFELFDADDDNSLRPIEVEDLFST-----APECPWD-------------EAPYKDAAEKTALGGLSLDGFLSEWA 239 (430)
Q Consensus 180 l~~~F~~fD~d~dG~is~~el~~~~~~-----~~~~~~~-------------~~~~~~~~d~~~dg~i~~~ef~~~w~ 239 (430)
++.+|+.||+||||+|+.+||..++.. .+..+-. ...+++.+|.|+||.||++||+..+.
T Consensus 22 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 99 (103)
T 1snl_A 22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 99 (103)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence 679999999999999999999999874 2322211 23466789999999999999998753
No 494
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=98.59 E-value=5.9e-08 Score=83.47 Aligned_cols=97 Identities=13% Similarity=0.165 Sum_probs=71.2
Q ss_pred HHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHHHHHcCCchh
Q 014101 58 ALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHALFIEKGRLET 136 (430)
Q Consensus 58 ~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~~~~~~~~~~ 136 (430)
.+..+|+.+|.|+||.|+.+|+..++... ......+.+..+++.+ |.+++| |+.+||..++..
T Consensus 64 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~-~~~~~~~~~~~~F~~~------D~d~~G~i~~~e~~~~l~~--------- 127 (166)
T 2aao_A 64 EILDLMQAADVDNSGTIDYKEFIAATLHL-NKIEREDHLFAAFTYF------DKDGSGYITPDELQQACEE--------- 127 (166)
T ss_dssp HHHHHHHHHCTTCCSSBCHHHHHHHHTTC-HHHHTTHHHHHHHHHH------CTTCSSSBCHHHHHHHTCC---------
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHH-hhcccHHHHHHHHHHh------CCCCCCcCcHHHHHHHHHH---------
Confidence 57889999999999999999998775322 1112346677778777 678889 999999887320
Q ss_pred HHHHHHhhcCCCCcccccccCCCCcccCCCCCccccCHHHHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc
Q 014101 137 TWTVLRKFGYNNDIKLADELIPYSAFKRAPDQSVELTNEAIDFLKGIFELFDADDDNSLRPIEVEDLFST 206 (430)
Q Consensus 137 ~w~~l~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~F~~fD~d~dG~is~~el~~~~~~ 206 (430)
+| ++ .+.+..+|+.+|.|+||.|+.+||..++..
T Consensus 128 -------~~--------------------------~~---~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 161 (166)
T 2aao_A 128 -------FG--------------------------VE---DVRIEELMRDVDQDNDGRIDYNEFVAMMQK 161 (166)
T ss_dssp --------------------------------------------CCHHHHHCTTCSSSBCHHHHHHHHC-
T ss_pred -------cC--------------------------CC---HHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 00 01 123567999999999999999999999865
No 495
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=98.58 E-value=6.6e-09 Score=80.24 Aligned_cols=65 Identities=15% Similarity=0.253 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhc-CCCCC-CCCHHHHHHhhcc---CCCCC--CCCCcccccccccCCcccchhhHHhhhhh
Q 014101 176 AIDFLKGIFELFD-ADDDN-SLRPIEVEDLFST---APECP--WDEAPYKDAAEKTALGGLSLDGFLSEWAL 240 (430)
Q Consensus 176 ~~~~l~~~F~~fD-~d~dG-~is~~el~~~~~~---~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~w~~ 240 (430)
..+.++.+|+.|| +|++| .|+.+||+.++.. .+..+ .....+++.+|.|+||.|+|+||+..|..
T Consensus 8 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 79 (90)
T 1k8u_A 8 AIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 79 (90)
T ss_dssp HHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 3456899999999 69999 9999999999985 43221 12245678899999999999999998754
No 496
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=98.58 E-value=1.8e-08 Score=85.36 Aligned_cols=62 Identities=18% Similarity=0.233 Sum_probs=54.2
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
...++++|+.||+|++|.|+.+||..++.. +|.+++++++..+++.+ | +++| |+|+||+.++
T Consensus 86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~------d-~~dg~i~~~eF~~~~ 148 (151)
T 1w7j_B 86 YEDYLEGFRVFDKEGNGKVMGAELRHVLTT-LGEKMTEEEVETVLAGH------E-DSNGCINYEAFLKHI 148 (151)
T ss_dssp --CCHHHHHTTCTTSSSEEEHHHHHHHHHH-SSSCCCHHHHHHHHTTC------C-CTTSEEEHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHhc------c-CCCCeEeHHHHHHHH
Confidence 456788999999999999999999999776 58889999999999887 7 7889 9999999874
No 497
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=98.55 E-value=2e-08 Score=98.55 Aligned_cols=61 Identities=10% Similarity=0.086 Sum_probs=41.1
Q ss_pred EEEEEEeCCChhHHHhhhccccccccccEEEEEEECCChhhHHHHHHHHHHHHhcCCCCCCCCcEEEEEeCCCCCCc
Q 014101 334 KKTVVLREIPEEAVAKLLSNKDSLAACDIAVFVHDSSDESSWKRATELLVEVASYGEDTGFEVPCLIVAAKDDLDSF 410 (430)
Q Consensus 334 ~~~~i~d~~G~e~~~~~~~~~~~~~~ad~vilv~D~t~~~S~~~~~~~l~~l~~~~~~~~~~~PiilVgnK~Dl~~~ 410 (430)
..+.++||+|..... ...+..+|++++|+|.+..+.+..+.. .. .+.|+++|+||+|+...
T Consensus 172 ~~~iiiDTpGi~~~~-----~~~~~~aD~vl~V~d~~~~~~~~~l~~-------~~----~~~p~ivVlNK~Dl~~~ 232 (355)
T 3p32_A 172 FDVILIETVGVGQSE-----VAVANMVDTFVLLTLARTGDQLQGIKK-------GV----LELADIVVVNKADGEHH 232 (355)
T ss_dssp CCEEEEEECSCSSHH-----HHHHTTCSEEEEEEESSTTCTTTTCCT-------TS----GGGCSEEEEECCCGGGH
T ss_pred CCEEEEeCCCCCcHH-----HHHHHhCCEEEEEECCCCCccHHHHHH-------hH----hhcCCEEEEECCCCcCh
Confidence 467899999943222 233488999999999876554432221 00 14699999999999763
No 498
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=98.54 E-value=1.2e-07 Score=79.81 Aligned_cols=61 Identities=15% Similarity=0.256 Sum_probs=54.3
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHH
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCFNSPLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLH 125 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~ 125 (430)
...++++|+.||+|+||.|+.+||..++.. +|.+++++++..+++.+ +++| |+|+||+.++
T Consensus 83 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~--------d~dg~i~~~eF~~~l 144 (146)
T 2qac_A 83 VEELIKMFAHFDNNCTGYLTKSQMKNILTT-WGDALTDQEAIDALNAF--------SSEDNIDYKLFCEDI 144 (146)
T ss_dssp HHHHHHHHHTTCTTCSSEEEHHHHHHHHHH-SSSCCCHHHHHHHHHHH--------CSSSEEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-hCCCCCHHHHHHHHHHc--------CCCCcCcHHHHHHHH
Confidence 457899999999999999999999999776 58899999999999886 4668 9999999875
No 499
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=98.53 E-value=2.5e-08 Score=78.61 Aligned_cols=65 Identities=18% Similarity=0.243 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCCHHHHHHhhcc-CC------CCCCCCCcccccccccCCcccchhhHHhhhhhh
Q 014101 176 AIDFLKGIFELFDADDDNSLRPIEVEDLFST-AP------ECPWDEAPYKDAAEKTALGGLSLDGFLSEWALM 241 (430)
Q Consensus 176 ~~~~l~~~F~~fD~d~dG~is~~el~~~~~~-~~------~~~~~~~~~~~~~d~~~dg~i~~~ef~~~w~~~ 241 (430)
..+.|+++|+.||. +||+|+.+||+.++.. .+ ........+++.+|.|+||.|+|+||+..+.-.
T Consensus 7 ~~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 78 (96)
T 1a4p_A 7 AMETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (96)
T ss_dssp HHHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 45679999999993 5679999999999964 21 111223467789999999999999999987643
No 500
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=98.50 E-value=7.1e-08 Score=87.64 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=57.3
Q ss_pred HHHHHHHHHhhcCCCCCccCHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhhhcCCccCCC-cCHHhHHHHHHH
Q 014101 56 VRALKRIFILCDHDRDGALSDAELNDFQVKCFNS-PLQPSEIVGVKRVVQEKLREGVNERG-LTLAGFLFLHAL 127 (430)
Q Consensus 56 ~~~l~~~F~~~D~d~dG~is~~El~~~~~~~~g~-~~~~~e~~~i~~~~~~~~~~d~~~~g-i~~~eFl~~~~~ 127 (430)
...++++|+.||+|+||+|+.+||..++..+ |. .+++++++.+++.+ |.+++| |+|+||+.++..
T Consensus 129 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~-g~~~~~~~e~~~l~~~~------D~d~dG~I~~~EF~~~~~~ 195 (219)
T 3cs1_A 129 FFELTVMFDEIDASGNMLVDEEEFKRAVPKL-EAWGAKVEDPAALFKEL------DKNGTGSVTFDEFAAWASA 195 (219)
T ss_dssp HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHH-HHHTCCCSCHHHHHHHH------CTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHh-cccCCCHHHHHHHHHHh------CCCCCCcEeHHHHHHHHHH
Confidence 3569999999999999999999999998765 54 68888999999998 678899 999999998764
Done!