BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014108
(430 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q68EX9|CHID1_XENLA Chitinase domain-containing protein 1 OS=Xenopus laevis GN=chid1
PE=2 SV=1
Length = 393
Score = 239 bits (610), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 223/415 (53%), Gaps = 44/415 (10%)
Query: 37 KLITIFVIFFIVIPTVSVLLYCTKYSTRANR--------SATHMHQRGLVKTDVNYQEIL 88
+L++ ++ P +S L T A++ S T + RGLV TDV ++I+
Sbjct: 2 RLLSTLLLVATTYPLISATLSKTDSKKAASKAPETKTRLSDTSVQSRGLVSTDVKAKDIV 61
Query: 89 TEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQG-TSL 146
E+ S ++ R+ + VL Y+TPWN GY++AK F +KFT +S VW ++ +G +
Sbjct: 62 LEHRSYCAKKLKERHVSADVLGYVTPWNGHGYDIAKTFAAKFTLISSVWLQIRRKGREAY 121
Query: 147 ILEGRHNADAGWLLELRKGD--ALVLPRVVLEA-----FPKELLRKKKLRDKAIDLILTE 199
+ G H+ D GW+ ++RK ++PR++ + F + ++ + A ++ T
Sbjct: 122 QVTGLHDVDQGWIKDIRKTSKSTQIVPRILFDGWSYQDFESVFNSEDEIEELAGAMVQT- 180
Query: 200 CKEMEYDGIVLESWSTWTAYGILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVY 259
K+ +DG V+E WS + R + + +G ALHS L +
Sbjct: 181 AKDEHFDGFVVEVWSQLGG-------QKRQELVHLLIHIGEALHSAK--------LHFIL 225
Query: 260 VIGP---PHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQ 316
VI P P +++ FG + L+ VD FSLMTYD+S P PGPN+P+ W+ +Q
Sbjct: 226 VIPPAVAPGTDQLGM--FGRKEFDQLAPVVDSFSLMTYDYSSPQRPGPNSPISWVQACVQ 283
Query: 317 LLLGSPGIGTRSLARKIFLGINFYGNDF-VLSEGGGAITGREYLNLLQKHKPALQWEKNS 375
LL P R +KI LG++FYG D+ L G I G Y+ +L++HKP L W++
Sbjct: 284 LL--DPESKWR---KKILLGLHFYGMDYSALGATGEPILGNRYVEILKEHKPKLLWDQQI 338
Query: 376 GEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLWGTGIAIWEIGQGLDYFFDLL 430
EH+ + KHAVFYP+L SI +RL+ A+ GTGIAIWE+GQGLDYF+DLL
Sbjct: 339 AEHYLEYKKNKGGKHAVFYPTLKSIQVRLDLAEELGTGIAIWELGQGLDYFYDLL 393
>sp|Q66IL0|CHID1_XENTR Chitinase domain-containing protein 1 OS=Xenopus tropicalis
GN=chid1 PE=2 SV=1
Length = 394
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 209/380 (55%), Gaps = 34/380 (8%)
Query: 63 TRANRSATHMHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYEL 121
T+ S T + RGLV TDV ++I+ E+ S ++ R+ + VL Y+TPWN GY++
Sbjct: 37 TKTRLSDTLVQTRGLVSTDVKAKDIVLEHRSYCAKKLKERHVSADVLGYVTPWNGHGYDI 96
Query: 122 AKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRKGD--ALVLPRVVLEA- 177
AK F +KFT +SPVW +K +G + G H+ D GW+ ++RK ++PR++ +
Sbjct: 97 AKTFAAKFTLISPVWLQIKRKGKEAYHITGLHDVDQGWIKDIRKTSKSTQIVPRILFDGW 156
Query: 178 ----FPKELLRKKKLRDKAIDLILTECKEMEYDGIVLESWSTWTAYGILHDPELRNMALE 233
F + ++ + A ++ T K+ +DG V+E WS + R +
Sbjct: 157 SYQDFESVFSSEDEIEELAGAMVQT-AKDERFDGFVVEVWSQLGG-------QKRQELVH 208
Query: 234 FIKQLGNALHSVNSVRNRKQHLQLVYVIGPPHSEKFQPH--DFGPVDLQSLSDAVDGFSL 291
+ +G AL R L+ + VI PP H FG + L+ VD FSL
Sbjct: 209 LLTHIGEAL--------RLAKLRFILVI-PPALAPGTDHLGMFGRKEFDQLAPVVDSFSL 259
Query: 292 MTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDF-VLSEGG 350
MTYD+S P PGPN+P+ W+ +QLL P R +KI LG++FYG D+ L G
Sbjct: 260 MTYDYSSPQRPGPNSPITWVQACIQLL--DPESKWR---KKILLGLHFYGMDYSALGASG 314
Query: 351 GAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLW 410
I G Y+ +L++HKP L W++ EH+ + KHAVF+P+L SI +RL+ A+
Sbjct: 315 EPILGNRYIEILKEHKPKLLWDQQIAEHYLEYKKNKGGKHAVFFPTLKSIQVRLDLAEEL 374
Query: 411 GTGIAIWEIGQGLDYFFDLL 430
GTGI+IWE+GQGLDYF+DLL
Sbjct: 375 GTGISIWELGQGLDYFYDLL 394
>sp|Q5RFF6|CHID1_PONAB Chitinase domain-containing protein 1 OS=Pongo abelii GN=CHID1 PE=2
SV=1
Length = 393
Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 204/371 (54%), Gaps = 34/371 (9%)
Query: 72 MHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFT 130
+ +RGLV TD+ + ++ E+ S S A R++ VL Y+TPWNS GY++ K+F SKFT
Sbjct: 45 VQERGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFT 104
Query: 131 HLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRK-GDAL-VLPRVVLEAFPKELLRKKK 187
+SPVW LK +G + + G H+ D GW+ +RK L ++PR++ E + + R
Sbjct: 105 QISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVL 164
Query: 188 LRDKAID----LILTECKEMEYDGIVLESWSTWTAYGILHDPELRNMALEFIKQLGNALH 243
+ I+ ++ K +DG V+E W+ + + R + + L ALH
Sbjct: 165 DSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLS-------QKRVGLIHMLTHLAEALH 217
Query: 244 SVNSVRNRKQHLQLVYVIGP---PHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPH 300
L + VI P P +++ F + + L+ +DGFSLMTYD+S H
Sbjct: 218 QAR--------LLALLVIPPAITPGTDQLGM--FTHKEFEQLAPVLDGFSLMTYDYSTAH 267
Query: 301 NPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEGGGA-ITGREYL 359
PGPNAPL W+ +Q+L P RS KI LG+NFYG D+ S+ + G Y+
Sbjct: 268 QPGPNAPLSWVRACVQVL--DPKSKWRS---KILLGLNFYGMDYATSKDAREPVVGARYI 322
Query: 360 NLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLWGTGIAIWEI 419
L+ H+P + W+ + EHFF + +H VFYP+L S+ +RLE A+ G G++IWE+
Sbjct: 323 QTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGVGVSIWEL 382
Query: 420 GQGLDYFFDLL 430
GQGLDYF+DLL
Sbjct: 383 GQGLDYFYDLL 393
>sp|A0JPQ9|CHID1_RAT Chitinase domain-containing protein 1 OS=Rattus norvegicus GN=Chid1
PE=2 SV=2
Length = 393
Score = 232 bits (591), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 204/374 (54%), Gaps = 40/374 (10%)
Query: 72 MHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFT 130
+ RGLV TD+ ++++ E+ S S A R + VL Y+TPWNS GY++AK+F SKFT
Sbjct: 45 VQDRGLVVTDIKAEDVVLEHRSYCSARARERNFAGEVLGYVTPWNSHGYDVAKVFGSKFT 104
Query: 131 HLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRK--GDALVLPRVVLEAFPKELLRKKK 187
+SPVW LK +G + + G H+ D GW+ ++K ++PR++ E + + R
Sbjct: 105 QISPVWLQLKRRGREMFEITGLHDVDQGWMRAVKKHAKGVRIVPRLLFEDWTYDDFRSVL 164
Query: 188 LRDKAID----LILTECKEMEYDGIVLESWSTWTA---YGILHDPELRNMALEFIKQLGN 240
+ I+ ++ K +DG V+E WS + G++H + L
Sbjct: 165 DSEDEIEELSKTVVQVAKNQHFDGFVVEVWSQLLSQKHVGLIH----------MLTHLAE 214
Query: 241 ALHSVNSVRNRKQHLQLVYVIGP---PHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFS 297
ALH L ++ VI P P +++ F + + L+ +DGFSLMTYD+S
Sbjct: 215 ALHQAR--------LLVILVIPPAVTPGTDQLGM--FTHKEFEQLAPILDGFSLMTYDYS 264
Query: 298 GPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEGGGA-ITGR 356
PGPNAPL WI +Q+L P RS KI LG+NFYG D+ S+ + G
Sbjct: 265 TSQQPGPNAPLSWIRACVQVL--DPKSQWRS---KILLGLNFYGMDYAASKDAREPVIGA 319
Query: 357 EYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLWGTGIAI 416
Y+ L+ H+P + W+ + EHFF + +H VFYP+L S+ +RLE A+ G G++I
Sbjct: 320 RYIQTLKDHRPRVVWDSQAAEHFFEYKKNRGGRHVVFYPTLKSLQVRLELARELGVGVSI 379
Query: 417 WEIGQGLDYFFDLL 430
WE+GQGLDYF+DLL
Sbjct: 380 WELGQGLDYFYDLL 393
>sp|Q9BWS9|CHID1_HUMAN Chitinase domain-containing protein 1 OS=Homo sapiens GN=CHID1 PE=1
SV=1
Length = 393
Score = 232 bits (591), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 203/371 (54%), Gaps = 34/371 (9%)
Query: 72 MHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFT 130
+ RGLV TD+ + ++ E+ S S A R++ VL Y+TPWNS GY++ K+F SKFT
Sbjct: 45 VQDRGLVVTDLKAESVVLEHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFT 104
Query: 131 HLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRK-GDAL-VLPRVVLEAFPKELLRKKK 187
+SPVW LK +G + + G H+ D GW+ +RK L ++PR++ E + + R
Sbjct: 105 QISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVL 164
Query: 188 LRDKAID----LILTECKEMEYDGIVLESWSTWTAYGILHDPELRNMALEFIKQLGNALH 243
+ I+ ++ K +DG V+E W+ + + R + + L ALH
Sbjct: 165 DSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLS-------QKRVGLIHMLTHLAEALH 217
Query: 244 SVNSVRNRKQHLQLVYVIGP---PHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPH 300
L + VI P P +++ F + + L+ +DGFSLMTYD+S H
Sbjct: 218 QAR--------LLALLVIPPAITPGTDQLGM--FTHKEFEQLAPVLDGFSLMTYDYSTAH 267
Query: 301 NPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEGGGA-ITGREYL 359
PGPNAPL W+ +Q+L P RS KI LG+NFYG D+ S+ + G Y+
Sbjct: 268 QPGPNAPLSWVRACVQVL--DPKSKWRS---KILLGLNFYGMDYATSKDAREPVVGARYI 322
Query: 360 NLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLWGTGIAIWEI 419
L+ H+P + W+ + EHFF + +H VFYP+L S+ +RLE A+ G G++IWE+
Sbjct: 323 QTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGVGVSIWEL 382
Query: 420 GQGLDYFFDLL 430
GQGLDYF+DLL
Sbjct: 383 GQGLDYFYDLL 393
>sp|Q922Q9|CHID1_MOUSE Chitinase domain-containing protein 1 OS=Mus musculus GN=Chid1 PE=2
SV=1
Length = 393
Score = 231 bits (589), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 211/392 (53%), Gaps = 46/392 (11%)
Query: 54 VLLYCTKYSTRANRSATHMHQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYIT 112
+LL T++S + + RGLV TD+ ++++ E+ S S A R + VL Y+T
Sbjct: 33 MLLEKTQFSDKP------VQDRGLVVTDIKAEDVVLEHRSYCSSRARERNFAGEVLGYVT 86
Query: 113 PWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRK--GDALV 169
PWNS GY++AK+F SKFT +SPVW LK +G + + G H+ D GW+ ++K +
Sbjct: 87 PWNSHGYDVAKVFGSKFTQISPVWLQLKRRGREMFEITGLHDVDQGWMRAVKKHAKGVRI 146
Query: 170 LPRVVLEAFPKELLRKKKLRDKAID----LILTECKEMEYDGIVLESWSTWTA---YGIL 222
+PR++ E + + R + I+ + K +DG V+E WS + G++
Sbjct: 147 VPRLLFEDWTYDDFRNVLDSEDEIEELSKTVAQVAKNQHFDGFVVEVWSQLLSQKHVGLI 206
Query: 223 HDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGP---PHSEKFQPHDFGPVDL 279
H + L ALH L ++ VI P P +++ F +
Sbjct: 207 H----------MLTHLAEALHQAR--------LLVILVIPPAVTPGTDQLGM--FTHKEF 246
Query: 280 QSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINF 339
+ L+ +DGFSLMTYD+S PGPNAPL WI +Q+L P RS KI LG+NF
Sbjct: 247 EQLAPILDGFSLMTYDYSTSQQPGPNAPLSWIRACVQVL--DPKSQWRS---KILLGLNF 301
Query: 340 YGNDFVLSEGGGA-ITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSLI 398
YG D+ S+ + G Y+ L+ H+P + W+ + EHFF + +H VFYP+L
Sbjct: 302 YGMDYAASKDAREPVIGARYVQTLKDHRPRVVWDSQAAEHFFEYKKNRGGRHVVFYPTLK 361
Query: 399 SISMRLEEAKLWGTGIAIWEIGQGLDYFFDLL 430
S+ +RLE A+ G G++IWE+GQGLDYF+DLL
Sbjct: 362 SLQVRLELARELGVGVSIWELGQGLDYFYDLL 393
>sp|Q7SYK0|CHID1_DANRE Chitinase domain-containing protein 1 OS=Danio rerio GN=chid1 PE=2
SV=1
Length = 391
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 205/379 (54%), Gaps = 34/379 (8%)
Query: 62 STRANRSATHMHQRGLVKTDVNYQEILTENSKVSENA-SHRYYTYPVLAYITPWNSKGYE 120
S+ A R A RGLV TD +++I+ E + + R + VL YITPWNS GY+
Sbjct: 37 SSVAERPA---QDRGLVVTDPQWRDIVREEKRFCHQCINTRQFKGAVLGYITPWNSHGYD 93
Query: 121 LAKMFNSKFTHLSPVWYDLKSQG-TSLILEGRHNADAGWLLELRKGDAL--VLPRVVLEA 177
+AK+F K T +SPVW L+ +G S + G H+ D GW+ +RK + +LPR++ +
Sbjct: 94 IAKLFGPKLTSVSPVWLQLRRRGPESFHITGLHDHDPGWVKAVRKANKKNKILPRLLFDG 153
Query: 178 FPKE----LLRKKKLRDKAIDLILTECKEMEYDGIVLESWSTWTAYGILHDPELRNMALE 233
+ + +L + ++ L K +DG LE WS N E
Sbjct: 154 WSYQDYVSVLDSEDEMEELGREALEVAKAEGFDGYTLELWSQLGG----------NKRKE 203
Query: 234 FIKQLGNALHSVNSVRNRKQHLQLVYVIGPPHSEKF-QPHDFGPVDLQSLSDAVDGFSLM 292
+ + + ++N+ + L V VI P + QP FG D + L+ VD FSLM
Sbjct: 204 LVHLVTHLCETLNAGK-----LTCVLVIPPSVAPGTGQPGMFGRDDFEKLAPVVDAFSLM 258
Query: 293 TYDFSGPHNPGPNAPLKWI-SFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEGGG 351
TYD+SGP PGP+APL W+ LQL +P R KI LG+N YG DF G
Sbjct: 259 TYDYSGPGRPGPSAPLPWVRECVLQL---APENQWR---HKILLGVNMYGLDFSSHGGAE 312
Query: 352 AITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLWG 411
+ G + LL++ KP LQW++N+GEHFF + N VKH V+YP+L + +R+ A G
Sbjct: 313 PLLGARCIELLKEVKPKLQWDENTGEHFFNYKRNNGVKHVVYYPTLKFLQLRISLAAELG 372
Query: 412 TGIAIWEIGQGLDYFFDLL 430
TGI++WE+GQGLDYF+DLL
Sbjct: 373 TGISMWELGQGLDYFYDLL 391
>sp|Q5EAB4|CHID1_BOVIN Chitinase domain-containing protein 1 OS=Bos taurus GN=CHID1 PE=2
SV=1
Length = 393
Score = 218 bits (556), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 132/374 (35%), Positives = 200/374 (53%), Gaps = 42/374 (11%)
Query: 73 HQRGLVKTDVNYQEILTEN-SKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTH 131
+RGLV TD+ ++++ E+ S S A +++ VL YITPWN GY++AK+F KFTH
Sbjct: 46 QERGLVVTDLRAEDVVLEHRSYCSAKAHRKHFAGDVLGYITPWNRHGYDVAKIFGGKFTH 105
Query: 132 LSPVWYDLKSQGTSLI-LEGRHNADAGWLLELRKGDA--LVLPRVVLEAFPKE----LLR 184
++PVW L+ G + + G + D GWL +RK ++PR+ E + E +L
Sbjct: 106 VAPVWLQLRRHGREMFEVTGLDDVDQGWLRAVRKQAKGLRIVPRLRFEDWTYEDFDSVLD 165
Query: 185 KKKLRDKAIDLILTECKEMEYDGIVLESWSTWTAY---GILHDPELRNMALEFIKQLGNA 241
+ ++ ++ K +DG+V+E W+ G++H + + A
Sbjct: 166 NEDEIEELSRTVVQVAKSQHFDGLVVEVWNQLLVQKHAGLIH----------LLTHMAEA 215
Query: 242 LHSVNSVRNRKQHLQLVYVIGPPH----SEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFS 297
LH Q LV+++ PP + K F + + L+ +DGFSLMTYD+S
Sbjct: 216 LH---------QARLLVFLVIPPAVAPGTNKLGM--FTNTEFEQLAPVLDGFSLMTYDYS 264
Query: 298 GPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEGGGA-ITGR 356
GPNAPL W+ +Q+L P RS KI LG+NFYG D+ S+ I G
Sbjct: 265 TAQPAGPNAPLPWVRACVQVL--DPKSKWRS---KILLGLNFYGMDYSASKDAREPIIGA 319
Query: 357 EYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLWGTGIAI 416
Y+ L+ H+P + W+ + EHFF + +H VFYP+L S+ RLE A+ G G++I
Sbjct: 320 RYIQTLKDHRPQVVWDSQAAEHFFEYKKSRGGRHVVFYPTLKSLQERLELAQELGVGLSI 379
Query: 417 WEIGQGLDYFFDLL 430
WE+GQGLDYF+DLL
Sbjct: 380 WELGQGLDYFYDLL 393
>sp|Q54G42|CHID1_DICDI Chitinase domain-containing protein 1 OS=Dictyostelium discoideum
GN=chid1 PE=3 SV=1
Length = 385
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 214/368 (58%), Gaps = 35/368 (9%)
Query: 72 MHQRGLVKTDVNYQEILTENSKVSENASHRYYTY-PVLAYITPWNSKGYELAKMFNSKFT 130
+ QRGLV+ +V+ ++I+ +K +N + + L YITPWN KGY++A + KFT
Sbjct: 44 VKQRGLVRENVSAKQIINNYNKYFKNVDIKNFEQGNTLVYITPWNGKGYDVATKWAKKFT 103
Query: 131 HLSPVWYDLKSQGTSLILEGRHNADAGWLLELRKGD---ALVLPRVVLEA---FPKELLR 184
H+SPVW+ +K + +++EG HN D W+ ++++ + +LPR E KE +
Sbjct: 104 HISPVWHQVKFENNKVMIEGDHNIDKKWMEKVKENSDQKSKILPRFSFEGQQWGSKESFQ 163
Query: 185 KKKLRDKAIDLILTECKEMEYDGIVLESWSTWTAYGILH-DPELRNMALEFIKQLGNALH 243
K + K ID +++ K+ YDG+V+E GI+H + +LR+ F+ L LH
Sbjct: 164 -KYIDPKLIDSLVSTVKKNNYDGLVIE--------GIVHINKQLRD---PFLISLSEKLH 211
Query: 244 SVNSVRNRKQHLQLVYVIGPPHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPG 303
S+ K+ + ++Y P +K Q FG D + LS+ +DG SLMTYDF GP + G
Sbjct: 212 SIG-----KEIILVIY----PFRQKGQETGFGAKDFELLSNHIDGVSLMTYDF-GP-SGG 260
Query: 304 PNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEGGGAITGREYLNLLQ 363
NAP W+ L+ LL + G ++KIF+GI FYG ++ AI G E++++L+
Sbjct: 261 MNAPKVWVEDNLKFLLPN---GENKNSKKIFMGIPFYGYKIGENDQSDAIVGSEFISVLK 317
Query: 364 KHK-PALQWEKNSGEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLWGTGIAIWEIGQG 422
++K L++++N+ EH F + ++ + ++ YPSL+ I R++ A + I+IWEIGQG
Sbjct: 318 QNKSKKLKFDQNTHEHIFTYKNKKNQQVSMTYPSLLFIEDRIQLANKYKVSISIWEIGQG 377
Query: 423 LDYFFDLL 430
LDYF DLL
Sbjct: 378 LDYFMDLL 385
>sp|O32258|YVBX_BACSU Uncharacterized glycosylase YvbX OS=Bacillus subtilis (strain 168)
GN=yvbX PE=3 SV=1
Length = 344
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 34/257 (13%)
Query: 182 LLRKKKLRDKAIDLILTECKEMEYDGIVLESWSTWTAYGILHDPELRNMALEFIKQLGNA 241
++ K + + D ++T K+ Y GI ++ + +PE R FI+ + A
Sbjct: 109 VMSNKTAKKRFTDQLITLAKKHSYYGINIDFEAV--------NPEDRAAYSNFIQYVSQA 160
Query: 242 LHSVNSVRNRKQHLQLVYVIGPPHSEKFQPHDFG-PVDLQSLSDAVDGFSLMTYDFSGP- 299
L+ K+H++ + + P S + D+ P D + D +MTYD G
Sbjct: 161 LN--------KKHIKTMVSV-PAKSADDKNDDWSWPYDYAKIGKYADFVQVMTYDEHGIW 211
Query: 300 HNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEGGGAITGREYL 359
PG A WI +LQ + + A K+ +GI YG D+ + +G + T RE+
Sbjct: 212 GEPGSVASTNWIKSSLQFSV------KKIKANKVIMGIPAYGYDWDVKDGSTS-TIREWN 264
Query: 360 NLL-----QKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLWG-TG 413
L QK KPA K SG F + D+ + KH V+Y + ++ + AK + G
Sbjct: 265 ELKSLIKKQKAKPAFN--KKSGSMTFSYVDKKKHKHVVWYENEKTVQTKSHLAKQYKIAG 322
Query: 414 IAIWEIGQGLDYFFDLL 430
++++ +G + F+ +
Sbjct: 323 VSVYALGNESESFWKAI 339
>sp|O05495|YDHD_BACSU Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis
(strain 168) GN=ydhD PE=1 SV=2
Length = 420
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 32/207 (15%)
Query: 228 RNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGPPHSEK-----FQPHDFGPVDLQSL 282
R++ F++QL R+R Q V I P + +D+G +
Sbjct: 219 RDLFTGFLRQL----------RDRLQAGGYVLTIAVPAKTSDNIPWLRGYDYG-----GI 263
Query: 283 SDAVDGFSLMTYDFS-GPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYG 341
V+ +M YD+ PGP AP+ I T++ + + +RKI +G+ YG
Sbjct: 264 GAVVNYMFIMAYDWHHAGSEPGPVAPITEIRRTIEFTIA------QVPSRKIIIGVPLYG 317
Query: 342 NDFVLSEGGG----AITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSL 397
D+++ G AI+ + + +++ +Q+ FF +SD+ H V++ +
Sbjct: 318 YDWIIPYQPGTVASAISNQNAIERAMRYQAPIQYSAEYQSPFFRYSDQQGRTHEVWFEDV 377
Query: 398 ISISMRLEEAKLWG-TGIAIWEIGQGL 423
S+S +++ + + I W++ G
Sbjct: 378 RSMSRKMQIVREYRLQAIGAWQLTLGF 404
>sp|Q9W5U2|CHIT3_DROME Probable chitinase 3 OS=Drosophila melanogaster GN=Cht3 PE=2 SV=2
Length = 2286
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 17/90 (18%)
Query: 278 DLQSLSDAVDGFSLMTYDFSGP--HNPGPNAPLKWIS----------FTLQLLLGSPGIG 325
D +LSD VD ++MTYD+ G G +PL +S +T+QLLL +G
Sbjct: 394 DFPALSDIVDYMTVMTYDYHGAWEQKTGHVSPLYGLSSDTYPQYNTNYTMQLLL---KMG 450
Query: 326 TRSLARKIFLGINFYGNDFVLSEGGGAITG 355
R K+ L I FYG F L+ + G
Sbjct: 451 ARR--EKLVLSIPFYGQSFTLATAHQILAG 478
>sp|Q01460|DIAC_RAT Di-N-acetylchitobiase OS=Rattus norvegicus GN=Ctbs PE=1 SV=1
Length = 367
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 35/177 (19%)
Query: 282 LSDAVDGFSLMTYD----FSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLA-RKIFLG 336
++DA D +M+YD NAP Q L G ++ RK+ +G
Sbjct: 182 IADACDFLFVMSYDEQSQIWSECIAAANAPYN------QTLTGYGDYLRMGISPRKLVMG 235
Query: 337 INFYGNDFVL----------------------SEGGGAITGREYLNLLQKHKPALQWEKN 374
I +YG D++ G + R + + QW ++
Sbjct: 236 IPWYGYDYICLNLSKDDVCAIAKVPFRGAPCSDAAGHQVPYRVIMKQVNSSVSGSQWNQD 295
Query: 375 SGEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLWG-TGIAIWEIGQGLDYFFDLL 430
++ + D H V+Y + SIS++ K +G GI +W LDY D L
Sbjct: 296 QQAPYYNYKDPTGRLHQVWYDNPRSISLKAAFVKHYGLRGIGMWN-ANCLDYSDDAL 351
>sp|P0C6X1|R1AB_CVH22 Replicase polyprotein 1ab OS=Human coronavirus 229E GN=rep PE=1 SV=1
Length = 6758
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 48 VIPTVSVLLYCTKYS--TRANRSATHMHQRGLVKTDVNYQEILTENSKVSENASHRYYTY 105
++ TVS L+Y K+ A++ + +RG V+ D N I V + H+ T+
Sbjct: 5444 IVNTVSELVYENKFVPVKEASKQCFKIFERGSVQVD-NGSSINRRQLDVVKRFIHKNSTW 5502
Query: 106 PVLAYITPWNSKGYELAKMF 125
+I+P+NS+ Y A++
Sbjct: 5503 SKAVFISPYNSQNYVAARLL 5522
>sp|A9BJK3|FTSH3_PETMO ATP-dependent zinc metalloprotease FtsH 3 OS=Petrotoga mobilis
(strain DSM 10674 / SJ95) GN=ftsH3 PE=3 SV=1
Length = 645
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 317 LLLGSPGIGTRSLARKIF--LGINFY---GNDFV-LSEGGGAITGREYLNLLQKHKPAL 369
LL+G PG G LAR + G+ F+ G+DFV L G GA R+ N + + PA+
Sbjct: 199 LLVGEPGTGKTLLARAVAGEAGVPFFYISGSDFVELFVGVGAARVRDLFNQAKANAPAI 257
>sp|Q311U1|XGPT_DESDG Xanthine phosphoribosyltransferase OS=Desulfovibrio desulfuricans
(strain G20) GN=gpt PE=3 SV=1
Length = 162
Score = 32.0 bits (71), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 32/83 (38%)
Query: 137 YDLKSQGTSLILEGRHNADAGWLLELRKGDALVLPRVVLEAFPKELLRKKKLRDKAIDLI 196
YD KSQG +L+G GWL+ D R V E PK + ++
Sbjct: 69 YDWKSQGGISVLKGVEGDGEGWLIVDDLVDTGTTARAVREMLPKAHFATVYAKPSGRPVV 128
Query: 197 LTECKEMEYDGIVLESWSTWTAY 219
T E+ D +L W + Y
Sbjct: 129 DTYITEVSQDTWILFPWDSEIQY 151
>sp|B2JVU2|FTSH_BURP8 ATP-dependent zinc metalloprotease FtsH OS=Burkholderia phymatum
(strain DSM 17167 / STM815) GN=ftsH PE=3 SV=1
Length = 645
Score = 32.0 bits (71), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 317 LLLGSPGIGTRSLARKIF--LGINFY---GNDFV-LSEGGGAITGREYLNLLQKHKPAL 369
LL+G PG G LAR + G+ F+ G++FV + G GA R+ +KH PA+
Sbjct: 196 LLVGPPGTGKTLLARAVAGEAGVAFFSISGSEFVEMFVGVGAARVRDLFEQARKHAPAI 254
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,284,071
Number of Sequences: 539616
Number of extensions: 7131510
Number of successful extensions: 17198
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 17131
Number of HSP's gapped (non-prelim): 24
length of query: 430
length of database: 191,569,459
effective HSP length: 120
effective length of query: 310
effective length of database: 126,815,539
effective search space: 39312817090
effective search space used: 39312817090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)