Citrus Sinensis ID: 014108

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

MAKRRDRRVAPSPGRPKNRVESAARLDQFSDSASDRKLITIFVIFFIVIPTVSVLLYCTKYSTRANRSATHMHQRGLVKTDVNYQEILTENSKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLILEGRHNADAGWLLELRKGDALVLPRVVLEAFPKELLRKKKLRDKAIDLILTECKEMEYDGIVLESWSTWTAYGILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGPPHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEGGGAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLWGTGIAIWEIGQGLDYFFDLL

ccccccccccccccccccHHHHHHHcccccccccccEEEEEEEEEEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccHHHHHHHcccccEEEEEEEEECcccccccccccccccHHHHHHHHHcccEEEcEEEcccccHHHHccHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEcccccccccccccccccHHHHHHHccEEEEEEccccccccccccccHHHHHHHHHHHccccccccccccccEEEEEcccccccccccccccccHHHHHHHHHHccccEEECcccccCEEEEECccccEEEEEEccHHHHHHHHHHHHHcccEEEEEEcccccccccccc

*******************************SASDRKLITIFVIFFIVIPTVSVLLYCTKYSTRA***ATHMHQRGLVKTDVNYQEILTENSKVSENASHRYYTYPVLAYITPWNSKGYELAKMFNSKFTHLSPVWYDLKSQGTSLILEGRHNADAGWLLELRKGDALVLPRVVLEAFPKELLRKKKLRDKAIDLILTECKEMEYDGIVLESWSTWTAYGILHDPELRNMALEFIKQLGNALHSVNSVRNRKQHLQLVYVIGPPHSEKFQPHDFGPVDLQSLSDAVDGFSLMTYDFSGPHNPGPNAPLKWISFTLQLLLGSPGIGTRSLARKIFLGINFYGNDFVLSEGGGAITGREYLNLLQKHKPALQWEKNSGEHFFFFSDENQVKHAVFYPSLISISMRLEEAKLWGTGIAIWEIGQGLDYFFDLL

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Chitinase domain-containing protein 1		probable	Q66IL0
Chitinase domain-containing protein 1		probable	Q7SYK0
Chitinase domain-containing protein 1	Saccharide- and LPS-binding protein with possible roles in pathogen sensing and endotoxin neutralization. Ligand-binding specificity relates to the length of the oligosaccharides, with preference for chitotetraose (in vitro).	probable	Q922Q9

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3BXW, chain B
Confidence level:very confident
Coverage over the Query: 63-430
View the alignment between query and template
View the model in PyMOL