BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014112
(430 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93733|PLDB1_ARATH Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2
SV=4
Length = 1083
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 40/195 (20%)
Query: 55 GVLEVYIHQARDIHNICIYHKQ--DVYAKL----------CLTSDPENTVST-------N 95
G L+++I+ A+++ N+ ++HK D++ +L +TSDP +VS
Sbjct: 273 GNLDIWIYHAKNLPNMDMFHKTLGDMFGRLPGKIEGQLTSKITSDPYVSVSVAGAVIGRT 332
Query: 96 IINGGGRNPVFNENLKLNVKTVESSLKCEIFMMSRVKNYLEDQLLGFTLVPLSEVLVKNG 155
+ NPV+ ++ + V + E+ + + + + QL+G +P+ E +
Sbjct: 333 YVMSNSENPVWMQHFYVPV----AHHAAEVHFVVKDSDVVGSQLIGLVTIPV-EQIYSGA 387
Query: 156 KLEKEFS-LSSTDLFHSPAGFVQLSLAYA------------GASPDVMAIPAVPKPLAAD 202
K+E + L+S P + LS+ Y GA PD +P PL
Sbjct: 388 KIEGTYPILNSNGKPCKPGANLSLSIQYTPMDKLSVYHHGVGAGPDYQGVPGTYFPLRKG 447
Query: 203 ETA---QESEISESL 214
T Q++ + E +
Sbjct: 448 GTVRLYQDAHVPEGM 462
>sp|A4IJ05|SYT17_XENTR Synaptotagmin-17 OS=Xenopus tropicalis GN=syt17 PE=2 SV=1
Length = 474
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 57 LEVYIHQARDIHNICIYH--KQDV-----YAKLCLTSDPENTVSTNIINGGGRNPVFNEN 109
L V + +ARD+ Y +QD+ Y K+CL D +N+ T + +NPVF E
Sbjct: 201 LNVRVIEARDLPPPISYDGSRQDMAHSNPYVKICLLPDQKNSKQTGV-KRKTQNPVFEER 259
Query: 110 LKLNVKTVESSLKCEIFMMSRVKNYLEDQLLGFTLVPLSEV-LVKNGKLEKEFSLSSTDL 168
++ +E+ + + + + ++G +PL+EV LVK G K SS +
Sbjct: 260 YTFEIQFLEAQRRTLLLTIVDFDKFSRHCVIGKVAMPLNEVDLVKGGHWWKAIIPSSQN- 318
Query: 169 FHSPAGFVQLSLAY 182
G + LSL Y
Sbjct: 319 -EVELGELLLSLNY 331
>sp|P53901|INN1_YEAST Ingression protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=INN1 PE=1 SV=1
Length = 409
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 55 GVLEVYIHQARDIHNICIYHKQDVYAKLCLTSDPENTVSTNIINGGGRNPVFNENLKLNV 114
G+L VY+ +ARD+ N+ KQ+V +L + T ++N ++ G+NPVF+ K ++
Sbjct: 11 GILSVYVSKARDLPNLNKLDKQNVMLRLRIA---HMTRASNTLHRAGQNPVFHYLEKFDI 67
Query: 115 KT-VESSLKCEIFMMSRVKNYL 135
++ + E++ R K+ L
Sbjct: 68 TPEIKPLMYVEVYCDRRKKSPL 89
>sp|Q7XA06|SYT3_ARATH Synaptotagmin-3 OS=Arabidopsis thaliana GN=SYT3 PE=2 SV=1
Length = 540
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 54 IGVLEVYIHQARDIHNICIYHKQDVYAKLCLTSDPENTVSTNIINGGGRNPVFNENLKLN 113
+G+L V I +AR++ + D Y KL LT + T I NP +NE+ KL
Sbjct: 260 VGLLHVSILRARNLLKKDLLGTSDPYVKLSLTGEKLPAKKTT-IKKRNLNPEWNEHFKLI 318
Query: 114 VKTVESS-LKCEIFMMSRVKNYLEDQLLGFTLVPLSEVLVKNGKLEKEFSL 163
VK S L+ E+F +V + D+ LG ++PL ++ N KEF+L
Sbjct: 319 VKDPNSQVLQLEVFDWDKVGGH--DR-LGMQMIPLQKI---NPGERKEFNL 363
>sp|A0JJX5|SYT4_ARATH Synaptotagmin-4 OS=Arabidopsis thaliana GN=SYT4 PE=2 SV=1
Length = 569
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 54 IGVLEVYIHQARDIHNICIYHKQDVYAKLCLTSDPENTVSTNIINGGGRNPVFNENLKLN 113
+G L+V + QA+D+ N + K D YA + + P+ T T I+ NP++NE+ +
Sbjct: 263 VGKLDVKVVQAKDLANKDMIGKSDPYAIVFIRPLPDRTKKTKTIS-NSLNPIWNEHFEFI 321
Query: 114 VKTVESS-LKCEIFMMSRVKNYLEDQLLGFTLVPLSEVL---VKN--GKLEKEFSLSSTD 167
V+ V + L +F V + QL+G VPL+E++ VK+ KL K+ +
Sbjct: 322 VEDVSTQHLTVRVFDDEGVGS---SQLIGAAQVPLNELVPGKVKDIWLKLVKDLEIQRD- 377
Query: 168 LFHSPAGFVQLSLAYA 183
G VQL L Y
Sbjct: 378 --TKNRGQVQLELLYC 391
>sp|Q9C8S6|Y1322_ARATH C2 domain-containing protein At1g63220 OS=Arabidopsis thaliana
GN=At1g63220 PE=1 SV=1
Length = 147
Score = 38.9 bits (89), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 55 GVLEVYIHQARDIHNICIYHKQDVYAKL-CLTSDPENTVSTNIINGGGRNPVFNENLKLN 113
G LEV + A+ + + + D Y +L C T D + +N+ G G P +NE
Sbjct: 4 GTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQK----SNVAEGMGTTPEWNETFIFT 59
Query: 114 VKTVESSLKCEIFMMSRVKNYLEDQLLGFTLVPLSEVLVK 153
V + LK +IF ED +G +PL V V+
Sbjct: 60 VSEGTTELKAKIFDKDVGT---EDDAVGEATIPLEPVFVE 96
>sp|Q62807|SYT17_RAT Synaptotagmin-17 OS=Rattus norvegicus GN=Syt17 PE=2 SV=1
Length = 474
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 79 YAKLCLTSDPENTVSTNIINGGGRNPVFNENLKLNVKTVESSLKCEIFMMSRVKNYLEDQ 138
Y K+CL D +N+ T + + PVF E + +E+ + + + +
Sbjct: 230 YVKICLLPDQKNSKQTGV-KRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHC 288
Query: 139 LLGFTLVPLSEV-LVKNGKLEKEFSLSSTDLFHSPAGFVQLSLAY 182
++G VPL EV LVK G K SS + G + LSL Y
Sbjct: 289 VIGKVAVPLCEVDLVKGGHWWKALIPSSQN--EVELGELLLSLNY 331
>sp|Q920M7|SYT17_MOUSE Synaptotagmin-17 OS=Mus musculus GN=Syt17 PE=2 SV=1
Length = 470
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 79 YAKLCLTSDPENTVSTNIINGGGRNPVFNENLKLNVKTVESSLKCEIFMMSRVKNYLEDQ 138
Y K+CL D +N+ T + + PVF E + +E+ + + + +
Sbjct: 226 YVKICLLPDQKNSKQTGV-KRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHC 284
Query: 139 LLGFTLVPLSEV-LVKNGKLEKEFSLSSTDLFHSPAGFVQLSLAY 182
++G VPL EV LVK G K SS + G + LSL Y
Sbjct: 285 VIGKVAVPLCEVDLVKGGHWWKALIPSSQN--EVELGELLLSLNY 327
>sp|Q5R8Q5|SYT17_PONAB Synaptotagmin-17 OS=Pongo abelii GN=SYT17 PE=2 SV=1
Length = 474
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 79 YAKLCLTSDPENTVSTNIINGGGRNPVFNENLKLNVKTVESSLKCEIFMMSRVKNYLEDQ 138
Y K+CL D +N+ T + + PVF E + +E+ + + + +
Sbjct: 230 YVKICLLPDQKNSKQTGV-KRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHC 288
Query: 139 LLGFTLVPLSEV-LVKNGKLEKEFSLSSTDLFHSPAGFVQLSLAY 182
++G VPL EV LVK G K SS + G + LSL Y
Sbjct: 289 VIGKVSVPLCEVDLVKGGHWWKALIPSSQN--EVELGELLLSLNY 331
>sp|Q9BSW7|SYT17_HUMAN Synaptotagmin-17 OS=Homo sapiens GN=SYT17 PE=1 SV=1
Length = 474
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Query: 79 YAKLCLTSDPENTVSTNIINGGGRNPVFNENLKLNVKTVESSLKCEIFMMSRVKNYLEDQ 138
Y K+CL D +N+ T + + PVF E + +E+ + + + +
Sbjct: 230 YVKICLLPDQKNSKQTGV-KRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHC 288
Query: 139 LLGFTLVPLSEV-LVKNGKLEKEFSLSSTDLFHSPAGFVQLSLAY 182
++G VPL EV LVK G K SS + G + LSL Y
Sbjct: 289 VIGKVSVPLCEVDLVKGGHWWKALIPSSQN--EVELGELLLSLNY 331
>sp|Q8L706|SYT5_ARATH Synaptotagmin-5 OS=Arabidopsis thaliana GN=SYT5 PE=2 SV=1
Length = 560
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 IGVLEVYIHQARDIHNICIYHKQDVYAKLCLTSDPENTVSTNIINGGGRNPVFNENLKLN 113
+G+LEV + QA+++ N + K D +AK+ + E T + IN NP++NE+ +
Sbjct: 261 VGMLEVKLVQAKNLTNKDLVGKSDPFAKMFIRPLREKTKRSKTIN-NDLNPIWNEHFEFV 319
Query: 114 VK 115
V+
Sbjct: 320 VE 321
>sp|P41823|SY65_APLCA Synaptotagmin-1 OS=Aplysia californica GN=SYT1 PE=1 SV=2
Length = 428
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 55 GVLEVYIHQARDIHNICIYHKQDVYAKLCLTSDPENTVSTNIINGGGRNPVFNENLKLNV 114
G L V + QA D+ + + D Y K+ L D + T + + NPVFNE+ V
Sbjct: 168 GELSVNVIQAADLPGMDMSGTSDPYVKVYLLPDKKKKYETKV-HRKTLNPVFNESFTFKV 226
Query: 115 KTVESSLKCEIFMMSRVKNYLEDQLLGFTLVPLSEV 150
E K F + + + +G VPL+ +
Sbjct: 227 PYAEVGSKILTFAVYDFDRFSKHDQIGQVQVPLNSI 262
>sp|A4IFJ5|PA24A_BOVIN Cytosolic phospholipase A2 OS=Bos taurus GN=PLA2G4A PE=1 SV=1
Length = 749
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 77 DVYAKLCLTSDPENTVSTNIINGGGRNPVFNENLKLNVKTVESSLKCEIFMMSRVKNYLE 136
D Y +L ++S P++ T N NPV+NE + + + ++ EI +M NY+
Sbjct: 43 DPYVELFISSTPDSRKRTRHFNND-INPVWNETFEFILDPNQENI-LEITLMD--ANYVM 98
Query: 137 DQLLGFTLVPLSEVLVKNGK 156
D+ LG T P+S + V K
Sbjct: 99 DETLGTTTFPISSMKVGEKK 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.125 0.338
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,059,771
Number of Sequences: 539616
Number of extensions: 6151163
Number of successful extensions: 24030
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 327
Number of HSP's that attempted gapping in prelim test: 22351
Number of HSP's gapped (non-prelim): 1000
length of query: 430
length of database: 191,569,459
effective HSP length: 120
effective length of query: 310
effective length of database: 126,815,539
effective search space: 39312817090
effective search space used: 39312817090
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)