BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>014120
MNRCLSYAFASNVKELKLDVGCCRIYNLPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFSL
RKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLDSNRCGLE
RVYINGVNVHSVDIKVYLEPCEVNVSSCKNLTHLRLDGLSITDKWLYNQISELPFLEYLA
LHYCMKLRSINISSPRLKELVFERCEELVEFELDTPNLSIFKCFNYVESFSSNALALSQT
LLCFISHPVDNEWYLKFIKLLARFNLCSNVLNLQCNHEAVLIPRELREILCPPLTYHKHV
SFSVLSEILEVSLANLVDCLLWITPHAETLSIEWPNINFYELSFQFSYKKKLTYEGETPS
CCQSLPLSCWKHCIKEVKIECTEKYPIRQINRESFSSEDGDIMEKINDLWKSLLDMMILH
SKIFAEYDGP

High Scoring Gene Products

Symbol, full name Information P value
AT3G03360 protein from Arabidopsis thaliana 7.5e-05
AT5G02700 protein from Arabidopsis thaliana 8.9e-05
DAF1
AT3G62230
protein from Arabidopsis thaliana 0.00016
AT1G13570 protein from Arabidopsis thaliana 0.00035
AT3G18150 protein from Arabidopsis thaliana 0.00068

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  014120
        (430 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2099644 - symbol:AT3G03360 species:3702 "Arabi...   126  7.5e-05   1
TAIR|locus:2151316 - symbol:AT5G02700 "AT5G02700" species...   125  8.9e-05   1
TAIR|locus:2098088 - symbol:DAF1 "AT3G62230" species:3702...    92  0.00016   2
TAIR|locus:2010032 - symbol:AT1G13570 "AT1G13570" species...   119  0.00035   1
TAIR|locus:2092737 - symbol:AT3G18150 "AT3G18150" species...   117  0.00068   1


>TAIR|locus:2099644 [details] [associations]
            symbol:AT3G03360 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR001810 Pfam:PF00646
            PROSITE:PS50181 SMART:SM00256 EMBL:CP002686
            GenomeReviews:BA000014_GR SUPFAM:SSF81383 EMBL:AC009895
            HOGENOM:HOG000097837 EMBL:BT004131 EMBL:AK318807 EMBL:AK229563
            EMBL:AK229911 IPI:IPI00527984 IPI:IPI00845135 IPI:IPI00944252
            RefSeq:NP_186986.1 UniGene:At.48615 UniGene:At.74916
            ProteinModelPortal:Q84W80 SMR:Q84W80 PRIDE:Q84W80
            EnsemblPlants:AT3G03360.1 GeneID:821272 KEGG:ath:AT3G03360
            TAIR:At3g03360 eggNOG:NOG316608 InParanoid:Q84W80 OMA:ADIDSWI
            PhylomeDB:Q84W80 ProtClustDB:CLSN2913395 Genevestigator:Q84W80
            Uniprot:Q84W80
        Length = 481

 Score = 126 (49.4 bits), Expect = 7.5e-05, P = 7.5e-05
 Identities = 47/204 (23%), Positives = 95/204 (46%)

Query:     5 LSYAFASNVKELKLDVGCCRIYNLPQIVFY---LKSIYVLDF----EFCKLEPPRSTVTL 57
             +++A + NV+ L L +   + Y++P+ ++    LK +Y LDF    +F  L P + +V+ 
Sbjct:   130 INFAMSRNVENLSLYLDEDK-YDIPEFLYINSSLKQLY-LDFGCKKDFISLNP-KCSVSW 186

Query:    58 FSLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGXXXXXXXXXXXXXEIKLDSNRC 117
              SL+ L L   ++ DE I  +++GCP++E + +  C                +++ + RC
Sbjct:   187 TSLKNLSLYHCNISDESIAIILSGCPILESLLLFFCKKLKVLDLSKSPRLITLEI-TRRC 245

Query:   118 GLERVYINGVNVHSVDIKVYLEPCE-VNVSSCKNLTHLRLDGLSITDKWLYNQISELPFL 176
              +E   +   ++  + +    +PC  V+VSS      L +   +I D  L     +   +
Sbjct:   246 RMEPTQLVAPHIRCLRLINSEKPCALVDVSSLSQ-AELDITAYAIVDNKLEADFHQTMVV 304

Query:   177 EYLALHYCMKLRSINISSPRLKEL 200
             + L    C  +  + + +  LK L
Sbjct:   305 KML--EKCQNVEKLTLGANFLKML 326


>TAIR|locus:2151316 [details] [associations]
            symbol:AT5G02700 "AT5G02700" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
            SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
            SUPFAM:SSF81383 EMBL:AL162973 HOGENOM:HOG000097837 eggNOG:NOG278966
            IPI:IPI00541116 PIR:T48291 RefSeq:NP_195890.1 UniGene:At.54690
            ProteinModelPortal:Q9LZ15 SMR:Q9LZ15 EnsemblPlants:AT5G02700.1
            GeneID:831837 KEGG:ath:AT5G02700 TAIR:At5g02700 InParanoid:Q9LZ15
            OMA:LHINIAP PhylomeDB:Q9LZ15 ProtClustDB:CLSN2684081
            Genevestigator:Q9LZ15 Uniprot:Q9LZ15
        Length = 456

 Score = 125 (49.1 bits), Expect = 8.9e-05, P = 8.9e-05
 Identities = 29/94 (30%), Positives = 51/94 (54%)

Query:     5 LSYAFASNVKELKL---DVGCCRIYNLPQIVFYLKSIYVLD--FEFCKLEPPRSTVTLFS 59
             + +A + NV+ L +   D    + Y  P I +   S+ +LD   +F  + P   TV+  S
Sbjct:   111 IEFALSRNVQNLSVFVRDFTYSKTYRFPDIFYLSSSLKLLDVTLDFFDMIPT-CTVSWKS 169

Query:    60 LRKLCLSFVHVDDEVIRDMVAGCPLIEYININNC 93
             LR L L F  + DE I ++++GCP++E + ++ C
Sbjct:   170 LRNLTLRFCQIPDESIHNILSGCPILESLTLDTC 203


>TAIR|locus:2098088 [details] [associations]
            symbol:DAF1 "AT3G62230" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0048235
            "pollen sperm cell differentiation" evidence=IEP] [GO:0009827
            "plant-type cell wall modification" evidence=RCA] [GO:0009860
            "pollen tube growth" evidence=RCA] InterPro:IPR001810 Pfam:PF00646
            PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR SUPFAM:SSF81383 GO:GO:0016567
            GO:GO:0048235 EMBL:AL138651 EMBL:AK118317 EMBL:BT005694
            EMBL:AK220964 IPI:IPI00534217 PIR:T48015 RefSeq:NP_191782.1
            UniGene:At.34157 ProteinModelPortal:Q9M1Q1 SMR:Q9M1Q1 IntAct:Q9M1Q1
            EnsemblPlants:AT3G62230.1 GeneID:825396 KEGG:ath:AT3G62230
            TAIR:At3g62230 eggNOG:NOG282387 HOGENOM:HOG000112516
            InParanoid:Q9M1Q1 OMA:FRWIRLE PhylomeDB:Q9M1Q1
            ProtClustDB:CLSN2682889 Genevestigator:Q9M1Q1 Uniprot:Q9M1Q1
        Length = 461

 Score = 92 (37.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
 Identities = 40/137 (29%), Positives = 62/137 (45%)

Query:   170 ISELPFLEYLALHYCMK--LRSINISSPRLKELVFERCE-ELVEFELDTPNLSIFKCFNY 226
             I++ P LE L +  C +  L +I   + RL +LVF+ C     +  LD PN+ IFK F  
Sbjct:   195 IAKTPLLEILNIKNCWEIGLDAITGYNDRLMKLVFKYCSFSAQQTTLDVPNIQIFKYFGK 254

Query:   227 VESF---SSNALALSQTLLCF-------ISHPVDNEWYLKFIKLLARFNLCSNVLNL--Q 274
             V  F   S+N L + +  L +       +S       +L  +     F +C  VL L  +
Sbjct:   255 VYRFEFASANKL-MEEAYLDYREESRYNVSAGAIISGFLYSMLSAKTFTICPYVLQLIQE 313

Query:   275 CNHEAVL-IPRELREIL 290
             C     L  P E R+++
Sbjct:   314 CEDPVRLKAPMETRQLV 330

 Score = 75 (31.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
 Identities = 25/102 (24%), Positives = 47/102 (46%)

Query:     5 LSYAFASNVKELKLDVGCCR-------------IYNLPQIVFYLKSIYVLDFEFCKLEPP 51
             + +A + NVK L LD+   R             +  LP+  + + S+  L    C+ EP 
Sbjct:   111 IEFAVSKNVKHLFLDLSEPRWVTNNDAAQLEPGLIKLPESFYKITSLVTLKLFGCRFEPS 170

Query:    52 RSTVTLFSLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNC 93
             R       ++ +   ++ +  E++  ++A  PL+E +NI NC
Sbjct:   171 RLAKPGM-VKTMFFRWIRL--EMLSALIAKTPLLEILNIKNC 209


>TAIR|locus:2010032 [details] [associations]
            symbol:AT1G13570 "AT1G13570" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
            SMART:SM00256 EMBL:CP002684 GenomeReviews:CT485782_GR
            SUPFAM:SSF81383 InterPro:IPR006566 SMART:SM00579 EMBL:AC027134
            InterPro:IPR013101 Pfam:PF07723 Pfam:PF08387 EMBL:AK118468
            EMBL:BT026442 IPI:IPI00528188 PIR:G86268 RefSeq:NP_172814.1
            UniGene:At.42960 ProteinModelPortal:Q9FZ70 SMR:Q9FZ70
            EnsemblPlants:AT1G13570.1 GeneID:837918 KEGG:ath:AT1G13570
            TAIR:At1g13570 eggNOG:NOG237917 HOGENOM:HOG000090890
            InParanoid:Q9FZ70 OMA:ATENNIG PhylomeDB:Q9FZ70
            ProtClustDB:CLSN2682710 Genevestigator:Q9FZ70 Uniprot:Q9FZ70
        Length = 416

 Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
 Identities = 52/231 (22%), Positives = 106/231 (45%)

Query:     1 MNRCLSYAFASNVKELKLDVGCCRIYNLPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFSL 60
             +++ L +   + +KEL L +G    + +P  +F    +  L+   C+ +PP+       L
Sbjct:    99 IDQWLLFLSRNGIKELVLKLGEGE-FRVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYL 157

Query:    61 RKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGXXXXXXXXXXXXXEIKLDSNRCGLE 120
             + L L  + V  EVI  +++GCPL+E+++++                  + LD      +
Sbjct:   158 KSLNLHQILVAPEVIESLISGCPLLEFLSLSYFDSLVLSISAPNLMY--LYLDGE---FK 212

Query:   121 RVYI-NGVNVHSVDIKVYL--EPCEVNVSSCKNLTHLRLDGLSITDKWLYNQISELPFLE 177
              +++ N   + ++ + +Y+  +  +   SS  NL    L G+ + +K     +  + F +
Sbjct:   213 DIFLENTPKLVAISVSMYMHEDVTDFEQSSDYNLVKF-LGGVPLLEKL----VGYIYFTK 267

Query:   178 YLALHYC---MKLRSINISSPRLKELVFERCEE-LVEFELDT--PNLSIFK 222
             YL++      + L  I++ +  L ++ FE  +E LV   L T  PNL   K
Sbjct:   268 YLSIGDDPGRLPLTYIHLKTIELYQVCFEDADEVLVLLRLVTHSPNLKELK 318


>TAIR|locus:2092737 [details] [associations]
            symbol:AT3G18150 "AT3G18150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
            SMART:SM00256 EMBL:CP002686 GenomeReviews:BA000014_GR
            SUPFAM:SSF81383 EMBL:AB020749 IPI:IPI00544874 RefSeq:NP_188443.2
            UniGene:At.74522 ProteinModelPortal:Q9LV26 SMR:Q9LV26 PaxDb:Q9LV26
            PRIDE:Q9LV26 EnsemblPlants:AT3G18150.1 GeneID:821341
            KEGG:ath:AT3G18150 TAIR:At3g18150 eggNOG:NOG295494 OMA:NTIRKEY
            PhylomeDB:Q9LV26 Genevestigator:Q9LV26 Uniprot:Q9LV26
        Length = 456

 Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
 Identities = 50/194 (25%), Positives = 86/194 (44%)

Query:     5 LSYAFASNVKELKLDVG--CCRIYNLPQIVFYLKS-----IYVLDFEFCKLEPPRSTVTL 57
             + +A + NV  L LD+       +  P   F++ S       VLDF          T+  
Sbjct:   117 IKFAMSRNVDHLSLDLWNQVANKFKFPDF-FHINSSLKQLTVVLDFS--------DTMIA 167

Query:    58 FSLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGXXXXXXXXXXXXXEIKLDSNRC 117
               L+KL LS   + DE + +++ GCP++E + +++C G              ++++ N  
Sbjct:   168 ICLKKLYLSTCLLSDESMANILFGCPILESLTLDHCGGLRVLDLSKSLRLRTLEINCNIW 227

Query:   118 --GLERVYINGVNVHSVDIKVYLEPCE-VNVSSCKNLT-HLRLDGLSITDKWLYNQISEL 173
                L  + I   + H + ++    PC  V+VSS K    ++ +D  S T K  + Q++ L
Sbjct:   228 VPELTAMQIVAPHTHCLRLRNSKLPCSLVDVSSLKEAKLNICIDSFSKTIKADFLQVTLL 287

Query:   174 PFLEYLALHYCMKL 187
               LE   LH   KL
Sbjct:   288 KMLE--KLHNVEKL 299


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.140   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      430       417   0.00082  118 3  11 22  0.48    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  622 (66 KB)
  Total size of DFA:  298 KB (2152 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.81u 0.09s 35.90t   Elapsed:  00:00:02
  Total cpu time:  35.81u 0.09s 35.90t   Elapsed:  00:00:02
  Start:  Fri May 10 00:27:29 2013   End:  Fri May 10 00:27:31 2013

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