BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014120
(430 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80741|FB351_ARATH Probable F-box protein At1g60180 OS=Arabidopsis thaliana
GN=At1g60180 PE=4 SV=1
Length = 322
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 51 PRSTVTLFSLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEI 110
PR +V+ SL+KL L F + DE I +++GCP++E + +++C L L L +L+ +
Sbjct: 29 PRCSVSWTSLKKLSLRFCELSDECIAKILSGCPILESLTLSHCIYLTVLDLSKSLRLRTL 88
Query: 111 KLDSNRCGLERVYINGVNVHSVDIKVYLEPCE-VNVSS 147
++ N I ++H + +K Y PC V+VSS
Sbjct: 89 EIACNIDNTRPRQIVAPHIHRLRLKTYQSPCALVDVSS 126
>sp|Q9LZ15|FBL78_ARATH Putative F-box/LRR-repeat protein At5g02700 OS=Arabidopsis thaliana
GN=At5g02700 PE=4 SV=1
Length = 456
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
Query: 5 LSYAFASNVKELKL---DVGCCRIYNLPQIVFYLKSIYVLDFEFCKLEP-PRSTVTLFSL 60
+ +A + NV+ L + D + Y P I + S+ +LD + P TV+ SL
Sbjct: 111 IEFALSRNVQNLSVFVRDFTYSKTYRFPDIFYLSSSLKLLDVTLDFFDMIPTCTVSWKSL 170
Query: 61 RKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLDSNRCGLE 120
R L L F + DE I ++++GCP++E + ++ C L+ L L L+ + ++
Sbjct: 171 RNLTLRFCQIPDESIHNILSGCPILESLTLDTCRLLERLDLSKSPNLRRLDINQQYRRTG 230
Query: 121 RVYINGVNVHSVDIKVYLEPCE-VNVSS 147
V I +++ + + P V+VSS
Sbjct: 231 PVAIVAPHIYYLRLTYSSTPSTIVDVSS 258
>sp|Q9LSJ3|FBL48_ARATH Putative F-box/LRR-repeat protein At3g28410 OS=Arabidopsis thaliana
GN=At3g28410 PE=4 SV=2
Length = 465
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 5 LSYAFASNVKELKL---DVGCCRIYNLPQIVFYLKSIYVLDFEFCKLEP-PRSTVTLFSL 60
+ +A + NV+ L + D + Y P I + S+ LD + P V+ SL
Sbjct: 112 IEFALSRNVQNLSVFVRDFTYTKTYRFPDIFYISSSLKQLDVTLDFFDMIPTCAVSWKSL 171
Query: 61 RKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLDSNR 116
R L L F + DE + ++++GCP++E + ++ C L+ L L L+ +LD NR
Sbjct: 172 RNLTLRFCQIPDESMHNILSGCPILESLTLDTCRLLERLDLSKSPNLR--RLDINR 225
>sp|Q9LV26|FBL45_ARATH Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana
GN=At3g18150 PE=4 SV=2
Length = 456
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 5 LSYAFASNVKELKLDV--GCCRIYNLPQIVFYLKS-----IYVLDFEFCKLEPPRSTVTL 57
+ +A + NV L LD+ + P F++ S VLDF T+
Sbjct: 117 IKFAMSRNVDHLSLDLWNQVANKFKFPDF-FHINSSLKQLTVVLDFS--------DTMIA 167
Query: 58 FSLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLDSN-- 115
L+KL LS + DE + +++ GCP++E + +++C GL+ L L +L+ ++++ N
Sbjct: 168 ICLKKLYLSTCLLSDESMANILFGCPILESLTLDHCGGLRVLDLSKSLRLRTLEINCNIW 227
Query: 116 RCGLERVYINGVNVHSVDIKVYLEPCE-VNVSSCKNLT-HLRLDGLSITDKWLYNQISEL 173
L + I + H + ++ PC V+VSS K ++ +D S T K + Q++ L
Sbjct: 228 VPELTAMQIVAPHTHCLRLRNSKLPCSLVDVSSLKEAKLNICIDSFSKTIKADFLQVTLL 287
Query: 174 PFLEYL 179
LE L
Sbjct: 288 KMLEKL 293
>sp|Q9FX89|FB50_ARATH Putative F-box protein At1g49610 OS=Arabidopsis thaliana
GN=At1g49610 PE=4 SV=2
Length = 385
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 1 MNRCLSYAFASNVKELKLDVGCCRIYNLPQIVFYLKSI--YVLDFEFCKLEPPRSTVTLF 58
++ + +A + NV+ L L R+Y++P ++ S+ VL E +L P R +V+
Sbjct: 109 IDGWIKFAMSRNVENLFLSFDF-RLYDVPDYLYINSSVKQLVLGTESSELNP-RCSVSWS 166
Query: 59 SLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLDSNRCG 118
SL KL L DE I +++GCP+IE + ++ C L L L LK +++ + G
Sbjct: 167 SLTKLSL----FSDESIAKILSGCPIIESLTLHFCDQLMVLDLTKSPSLKILEIHGSIWG 222
Query: 119 LERVYINGVNVHSVDIKV 136
+I ++HS+ +K
Sbjct: 223 SGPKHIVAPHIHSLTLKT 240
>sp|Q84W80|FBL42_ARATH F-box/LRR-repeat protein At3g03360 OS=Arabidopsis thaliana
GN=At3g03360 PE=2 SV=2
Length = 481
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 29/223 (13%)
Query: 5 LSYAFASNVKELKLDVGCCRIYNLPQIVFY---LKSIYVLDF----EFCKLEPPRSTVTL 57
+++A + NV+ L L + + Y++P+ ++ LK +Y LDF +F L P + +V+
Sbjct: 130 INFAMSRNVENLSLYLDEDK-YDIPEFLYINSSLKQLY-LDFGCKKDFISLNP-KCSVSW 186
Query: 58 FSLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLDSNRC 117
SL+ L L ++ DE I +++GCP++E + + C LK L L +L +++ + RC
Sbjct: 187 TSLKNLSLYHCNISDESIAIILSGCPILESLLLFFCKKLKVLDLSKSPRLITLEI-TRRC 245
Query: 118 GLERVYINGVNVHSVDIKVYLEPCE-VNVSSCKNLTHLRLDGLSITDKWL---YNQISEL 173
+E + ++ + + +PC V+VSS L + +I D L ++Q +
Sbjct: 246 RMEPTQLVAPHIRCLRLINSEKPCALVDVSSLSQ-AELDITAYAIVDNKLEADFHQTMVV 304
Query: 174 PFLE-------------YLALHYCMKLRSINISSPRLKELVFE 203
LE +L + +LR ++ + K L+ E
Sbjct: 305 KMLEKCQNVEKLTLGANFLKMLSLAELRGVSFPKLKAKALILE 347
>sp|Q9LYZ2|FBL80_ARATH Putative F-box/LRR-repeat protein At5g02930 OS=Arabidopsis thaliana
GN=At5g02930 PE=4 SV=1
Length = 469
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 1 MNRCLSYAFASNVKELKLDVG-CCRIYNLPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFS 59
+N + +A + NV +L L C YN + S+ ++ + L P R V+ S
Sbjct: 112 VNSSIEFAMSHNVDDLSLAFRRCSPFYNFDDCFYTNSSLKRVELRYVDLMP-RCMVSWTS 170
Query: 60 LRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQL---LGLNKLKEIKLDSNR 116
L+ L L+ + DE ++++GCP++E +++ C LK L L L L +L+ ++ R
Sbjct: 171 LKNLSLTDCTMSDESFLEILSGCPILESLSLKFCMSLKYLNLSKSLRLTRLEIERISYIR 230
Query: 117 CGLERVYINGVNVHSVDIKVYLEPCE-VNVSS 147
+ + I +H + ++ C V+VSS
Sbjct: 231 APMLSMQIVAPYIHYLRLRDSEAHCTFVDVSS 262
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 141 CEVNVSSCKNLTHLRLDGLSITDKWLYNQISELPFLEYLALHYCMKLRSINIS-SPRLKE 199
C V+ +S KNL+ L +++D+ +S P LE L+L +CM L+ +N+S S RL
Sbjct: 164 CMVSWTSLKNLS---LTDCTMSDESFLEILSGCPILESLSLKFCMSLKYLNLSKSLRLTR 220
Query: 200 LVFER 204
L ER
Sbjct: 221 LEIER 225
>sp|Q9Y2K7|KDM2A_HUMAN Lysine-specific demethylase 2A OS=Homo sapiens GN=KDM2A PE=1 SV=3
Length = 1162
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 61/140 (43%), Gaps = 16/140 (11%)
Query: 90 INNCPGLKSLQLLGLNKLKEIKLDSNRCGLER-------VYINGVNVHSVDIKVYLEPCE 142
+N PGLK L L G + L ++ C L R V I + + +P +
Sbjct: 973 VNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPADKPGQ 1032
Query: 143 VNVSSCKNLTHLRLDGLSITDKWLYNQISELPFLEYLALHYCMKL--RSINI-----SSP 195
N S +N+T RL GL ITD L I +P L L L +C L +S N+ SS
Sbjct: 1033 DNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQSSNLLTAVGSST 1092
Query: 196 R--LKELVFERCEELVEFEL 213
R L EL C +L + L
Sbjct: 1093 RYSLTELNMAGCNKLTDQTL 1112
>sp|P59997|KDM2A_MOUSE Lysine-specific demethylase 2A OS=Mus musculus GN=Kdm2a PE=1 SV=2
Length = 1161
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 61/140 (43%), Gaps = 16/140 (11%)
Query: 90 INNCPGLKSLQLLGLNKLKEIKLDSNRCGLER-------VYINGVNVHSVDIKVYLEPCE 142
+N PGLK L L G + L ++ C L R V I + + +P +
Sbjct: 972 VNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPGQ 1031
Query: 143 VNVSSCKNLTHLRLDGLSITDKWLYNQISELPFLEYLALHYCMKL--RSINI-----SSP 195
N S +N+T RL GL ITD L I +P L L L +C L +S N+ SS
Sbjct: 1032 DNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQSSNLLTAVGSST 1091
Query: 196 R--LKELVFERCEELVEFEL 213
R L EL C +L + L
Sbjct: 1092 RYSLTELNMAGCNKLTDQTL 1111
>sp|Q3EA38|FDL48_ARATH Putative F-box/FBD/LRR-repeat protein At4g13965 OS=Arabidopsis
thaliana GN=At4g13965 PE=4 SV=2
Length = 427
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 3 RCLSYAFASNVKELKLDVGCCRIYNLPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFSLRK 62
+ + AFA N+++L L+V R +++P+ ++ +++ L+ ++ L S++ L SLR
Sbjct: 105 KLIGIAFACNLRKLVLEVDGGR-FSIPESLYNCETLDTLELKYSILMDVPSSICLKSLRT 163
Query: 63 LCLSFVHV-DDEVIRDMVAGCPLIEYININNCP 94
L L +V D+E ++++GCP +E + ++ P
Sbjct: 164 LHLHYVDFKDNESALNLLSGCPNLENLVVHRYP 196
>sp|Q8NHM5|KDM2B_HUMAN Lysine-specific demethylase 2B OS=Homo sapiens GN=KDM2B PE=1 SV=1
Length = 1336
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 90 INNCPGLKSLQLLGLNKLKEIKLDSNRCGLERV----YINGVNVHSVDIKVYLEPCEVNV 145
IN PGL+ L L G + + L S+ C L R ++ G+ ++ L P N
Sbjct: 1145 INRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQWVEGLK--DAQMRDLLSPPTDNR 1202
Query: 146 -------SSCKNLTHLRLDGLSITDKWLYNQISELPFLEYLALHYCMKL--RSINI 192
S +N+ LRL GL ITD L I +P L L L YC + +SIN+
Sbjct: 1203 PGQMDNRSKLRNIVELRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINL 1258
>sp|Q9FZ70|FDL1_ARATH F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana
GN=At1g13570 PE=2 SV=1
Length = 416
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 110/239 (46%), Gaps = 36/239 (15%)
Query: 1 MNRCLSYAFASNVKELKLDVGCCRIYNLPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFSL 60
+++ L + + +KEL L +G + +P +F + L+ C+ +PP+ L
Sbjct: 99 IDQWLLFLSRNGIKELVLKLGEGE-FRVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYL 157
Query: 61 RKLCLSFVHVDDEVIRDMVAGCPLIEYININ---------NCPGLKSLQLLGLNKLKEIK 111
+ L L + V EVI +++GCPL+E+++++ + P L L L G + K+I
Sbjct: 158 KSLNLHQILVAPEVIESLISGCPLLEFLSLSYFDSLVLSISAPNLMYLYLDG--EFKDIF 215
Query: 112 LDSNRCGLERVYINGVNVHSVDIKVYL--EPCEVNVSSCKNLTHLRLDGLSITDKWLYNQ 169
L+ N + ++ + +Y+ + + SS NL L G+ + +K
Sbjct: 216 LE-----------NTPKLVAISVSMYMHEDVTDFEQSSDYNLVKF-LGGVPLLEKL---- 259
Query: 170 ISELPFLEYLALH---YCMKLRSINISSPRLKELVFERCEE---LVEFELDTPNLSIFK 222
+ + F +YL++ + L I++ + L ++ FE +E L+ +PNL K
Sbjct: 260 VGYIYFTKYLSIGDDPGRLPLTYIHLKTIELYQVCFEDADEVLVLLRLVTHSPNLKELK 318
>sp|Q640I9|KDM2B_XENLA Lysine-specific demethylase 2B OS=Xenopus laevis GN=kdm2b PE=2 SV=1
Length = 1259
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 90 INNCPGLKSLQLLGLNKLKEIKLDSNRCGLERV----YINGV-NVHSVDI---KVYLEPC 141
IN P L+ L L G + + L S+ C L R ++ G+ + D+ P
Sbjct: 1068 INRLPALRDLNLSGCSWIAVSALCSSCCPLLRTLNVQWVEGLKDAQMRDLLSPPTDNRPG 1127
Query: 142 EV-NVSSCKNLTHLRLDGLSITDKWLYNQISELPFLEYLALHYCMKL--RSINI 192
++ N S +N+T LRL GL ITD L I +P L L L YC + +SIN+
Sbjct: 1128 QIDNRSKLRNITELRLAGLDITDASLRLMIRHMPLLAKLDLSYCNHVTDQSINL 1181
>sp|Q6P1G2|KDM2B_MOUSE Lysine-specific demethylase 2B OS=Mus musculus GN=Kdm2b PE=1 SV=1
Length = 1309
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 90 INNCPGLKSLQLLGLNKLKEIKLDSNRCGLERV----YINGVNVHSVDIKVYLEPCEVNV 145
IN PGL+ L L G + + L S+ C L R ++ G+ ++ L P N
Sbjct: 1118 INRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQWVEGLK--DAQMRDLLSPPTDNR 1175
Query: 146 -------SSCKNLTHLRLDGLSITDKWLYNQISELPFLEYLALHYCMKL--RSINI 192
S +N+ LRL GL ITD L I +P L L L YC + +SIN+
Sbjct: 1176 PGQMDNRSKLRNIVELRLAGLDITDVSLRLIIRHMPLLSKLQLSYCNHINDQSINL 1231
>sp|Q501G5|FB250_ARATH F-box protein At5g03100 OS=Arabidopsis thaliana GN=At5g03100 PE=2
SV=1
Length = 307
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 41 LDFEFCKLEPPRSTVTLFSLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQ 100
L +C L P + V+ SLR L L+ V D+ I ++ GC L+E + +N C L L
Sbjct: 131 LTLVYCILNP-KCVVSWSSLRNLSLNRCKVSDDSIAKILTGCSLLESLTLNLCDRLNDLD 189
Query: 101 LLGLNKLKEIKLDSNRCGLERVYINGVNVHSVDIKVYLEPCE-VNVSSCKNLTHLRLDGL 159
L L+ +++ +R ER+ ++ + ++ Y P V+VSS LT L GL
Sbjct: 190 LSKSLSLRRLEILGDRWTPERIV--APHIRYLRLENYQRPSTLVDVSS---LTEANL-GL 243
Query: 160 SITDKWLYNQISELPFLEYLALHYCMKLRSI 190
S + E L+Y+ +KL++I
Sbjct: 244 SKHVLDYFTCEMETESLQYMVRQTVVKLQNI 274
>sp|Q1PE04|FBL25_ARATH F-box/LRR-repeat protein 25 OS=Arabidopsis thaliana GN=FBL25 PE=2
SV=1
Length = 258
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Query: 1 MNRCLSYAFASNVKELKLDVGCCRIYN-LPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFS 59
++ + +A + NV L L N P + S+ ++ L P V+ S
Sbjct: 111 VHSSIEFAMSHNVDNLSLAFSSFPPCNKFPDFFYTSSSLKRVELRSASLTP-SCIVSWTS 169
Query: 60 LRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLDSNRC-- 117
LR L L+ ++ D+ +++GCP++E +++ C LK L L +L ++++ C
Sbjct: 170 LRDLSLTRCNLSDKSFLKILSGCPILESLSLKFCESLKYLDLSKSLRLTRLEIERRSCFR 229
Query: 118 -GLERVYINGVNVHSVDIK 135
++ + I ++H + ++
Sbjct: 230 EPMQSMQIVAPHIHYLRLR 248
>sp|Q6NKX3|FDL14_ARATH F-box/FBD/LRR-repeat protein At2g04230 OS=Arabidopsis thaliana
GN=At2g04230 PE=2 SV=1
Length = 448
Score = 39.7 bits (91), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 5 LSYAFASNVKELKLD--VGCCRIYNLPQIVF-YLKSIYVLDFE-FCKLEPPRSTVTLFSL 60
++ AFA V++L LD + LP ++F Y S+ +L + L+ P S V L SL
Sbjct: 111 IATAFARGVRKLVLDSFYQEDQTVTLPSVLFSYNDSLEILKLKCAIDLDFP-SRVCLKSL 169
Query: 61 RKLCLSFVHV-DDEVIRDMVAGCPLIE------YININ------NCPGLKSLQLLGLNKL 107
RKL L VH D+E + +++ GCP ++ Y N + P L+ L + L +
Sbjct: 170 RKLYLDQVHFKDEESVCNLLCGCPSLQDLVVHRYSNADVATFTIASPSLQRLTIEDLRQE 229
Query: 108 KEIKLDS---NRCGLERVYINGV-NVHSVDIKVYLEPCEVNVSSCKNLTH 153
S N GL+ + INGV ++ S I LE E +S+ +T+
Sbjct: 230 GGYGNGSYVINAPGLKYLNINGVIDIESCLIDKALELEEAKISNVSGITN 279
>sp|Q9SKK0|EBF1_ARATH EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1
SV=1
Length = 628
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 75 IRDMVAG------CPLIEYININNCPGLKSLQLLGLNKLKEIKLDSNRCGLERVYINGVN 128
IRD+ G C + ++I NCPG L + KL D + CGL+ + +G
Sbjct: 427 IRDLTTGLPASSHCSALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDLCGLKGITESGF- 485
Query: 129 VHSVDIKVYLEPCEVNVSSCKNLTHLRLDGLSITDKW 165
+H + + ++N S C NLT + ++ + W
Sbjct: 486 LHLIQSSLV----KINFSGCSNLTDRVISAITARNGW 518
>sp|Q9S9V9|FBL23_ARATH Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana
GN=FBL23 PE=4 SV=1
Length = 449
Score = 39.3 bits (90), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 161 ITDKWLYNQISELPFLEYLALHYCM----KLRSINISSPRLKELVFERCEELV 209
ITD+ + +S++P LEYL + YC+ LR I S P LK L R E++
Sbjct: 290 ITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIM 342
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 41/153 (26%)
Query: 70 VDDEVIRDMVAGCPLIEYININ--------------NCPGLKSLQLLGLNKLKEIKLDSN 115
+ DE + V+ PL+EY+ ++ +CP LK+L+L N+ EI ++
Sbjct: 290 ITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKL---NRAPEIMFSNS 346
Query: 116 RCGLERVYINGVNVHSVDIKVYLEPCEVNVSSCKNLTHLRLDGLSITDKWLYNQISELPF 175
G + ++ I S L HL+L G +T+K L + P
Sbjct: 347 ----------GFDDNAKAI----------AESMPELRHLQLLGNGLTNKGLNAILDGCPH 386
Query: 176 LEYLALHYCMKLRSINISSPRLKELVFERCEEL 208
LE+L L C +IN+ LK+ FER ++L
Sbjct: 387 LEHLDLRQCF---NINLVGD-LKKRCFERIKDL 415
>sp|Q8LF09|FDL23_ARATH F-box/FBD/LRR-repeat protein At4g00160 OS=Arabidopsis thaliana
GN=At4g00160 PE=2 SV=2
Length = 453
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 17/114 (14%)
Query: 5 LSYAFASNVKELKL---DVGCCRIYNLPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFSLR 61
+ AF+ +++EL L D G + P + ++ L L S V + SLR
Sbjct: 110 VGIAFSRHLRELVLVAADTGTGTAFKFPSSLCTCNTLETLRLVLLILVDISSPVVMKSLR 169
Query: 62 KLCLSFVHVDDEV-IRDMVAGCPL-------------IEYININNCPGLKSLQL 101
L L V DE IR++++GCP+ IE I+ P LK L +
Sbjct: 170 TLHLELVSYKDESSIRNLLSGCPILEELLVIRGEDSDIEVFTIDEVPSLKRLTI 223
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 44/222 (19%)
Query: 36 KSIYVLDFEFCKLEPPRSTVTLFSLRKLCLSFVHVD--------DEVIRDMVAGCPLIEY 87
++I VL+ C + T SL K C H+D + ++ + GCPL+E
Sbjct: 117 RNIEVLNLNGC---TKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQ 173
Query: 88 ININ---------------NCPGLKSLQLLGLNKLKE--IKLDSNRCGLERVYINGVNVH 130
+NI+ C GLK+L L G +L++ +K C E V +N
Sbjct: 174 LNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCP-ELVTLNLQTCL 232
Query: 131 SVDIKVYLEPCEVNVSSCKNLTHLRLDGLS-ITDKWLYNQISELPFLEYLALHYCMKLRS 189
+ + + C C L L G S ITD L P L L + C +L
Sbjct: 233 QITDEGLITICR----GCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTD 288
Query: 190 INISS-----PRLKELVFERCEE-----LVEFELDTPNLSIF 221
+ ++ L+++ E C + L++ + P L +
Sbjct: 289 VGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVL 330
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 86/222 (38%), Gaps = 44/222 (19%)
Query: 36 KSIYVLDFEFCKLEPPRSTVTLFSLRKLCLSFVHVD--------DEVIRDMVAGCPLIEY 87
++I VL+ C + T SL K C H+D + ++ + GCPL+E
Sbjct: 117 RNIEVLNLNGC---TKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQ 173
Query: 88 ININ---------------NCPGLKSLQLLGLNKLKE--IKLDSNRCGLERVYINGVNVH 130
+NI+ C GLK+L L G +L++ +K C E V +N
Sbjct: 174 LNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCP-ELVTLNLQTCL 232
Query: 131 SVDIKVYLEPCEVNVSSCKNLTHLRLDGLS-ITDKWLYNQISELPFLEYLALHYCMKLRS 189
+ + + C C L L G S ITD L P L L + C +L
Sbjct: 233 QITDEGLITICR----GCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTD 288
Query: 190 INISS-----PRLKELVFERCEE-----LVEFELDTPNLSIF 221
+ ++ L+++ E C + L++ + P L +
Sbjct: 289 VGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVL 330
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 36.2 bits (82), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 85/222 (38%), Gaps = 44/222 (19%)
Query: 36 KSIYVLDFEFCKLEPPRSTVTLFSLRKLCLSFVHVD--------DEVIRDMVAGCPLIEY 87
++I VL C + T SL K C H+D + ++ + GCPL+E
Sbjct: 117 RNIEVLSLNGC---TKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQ 173
Query: 88 ININ---------------NCPGLKSLQLLGLNKLKE--IKLDSNRCGLERVYINGVNVH 130
+NI+ C GLK+L L G +L++ +K C E V +N
Sbjct: 174 LNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCP-ELVTLNLQTCL 232
Query: 131 SVDIKVYLEPCEVNVSSCKNLTHLRLDGLS-ITDKWLYNQISELPFLEYLALHYCMKLRS 189
+ + + C C L L G S ITD L P L L + C +L
Sbjct: 233 QITDEGLITICR----GCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTD 288
Query: 190 INISS-----PRLKELVFERCEE-----LVEFELDTPNLSIF 221
+ ++ L+++ E C + L++ + P L +
Sbjct: 289 VGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVL 330
>sp|Q9LYZ4|FBL79_ARATH F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana
GN=At5g02910 PE=2 SV=1
Length = 458
Score = 35.8 bits (81), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 1 MNRCLSYAFASNVKELKLDVGCCRI--YNLPQIVFYLKSIYVLDFEFCKLE-PPRSTVTL 57
+N C+ +A + N ++L L+ R+ Y P + S+ L + + PR TV+
Sbjct: 93 VNGCIEFAISHNAEKLSLESRDYRVRNYKFPDFFYTNSSVKQLFVDSGSVHLIPRCTVSW 152
Query: 58 FSLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLDSNRC 117
SL+ L LS + DE +++G PL+E + + C L L L+ +++D +
Sbjct: 153 TSLKNLSLSNCTLSDESFLKILSGSPLLESLELLYCAEYMCLDLSQSQHLRRLEIDRSDW 212
Query: 118 GLERVYINGVNVHSVDIKVYLEPCE-VNVSS 147
+ I ++H + ++ PC V+VSS
Sbjct: 213 FMGPTKIVAPHLHCLRLRHSRLPCSLVDVSS 243
>sp|Q9M1Q1|FB215_ARATH F-box protein At3g62230 OS=Arabidopsis thaliana GN=At3g62230 PE=1
SV=1
Length = 461
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 170 ISELPFLEYLALHYC--MKLRSINISSPRLKELVFERCE-ELVEFELDTPNLSIFKCFNY 226
I++ P LE L + C + L +I + RL +LVF+ C + LD PN+ IFK F
Sbjct: 195 IAKTPLLEILNIKNCWEIGLDAITGYNDRLMKLVFKYCSFSAQQTTLDVPNIQIFKYFGK 254
Query: 227 VESF---SSNAL 235
V F S+N L
Sbjct: 255 VYRFEFASANKL 266
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 26/107 (24%)
Query: 5 LSYAFASNVKELKLDVGCCR-------------IYNLPQIVFYLKSIYVLDFEFCKLEP- 50
+ +A + NVK L LD+ R + LP+ + + S+ L C+ EP
Sbjct: 111 IEFAVSKNVKHLFLDLSEPRWVTNNDAAQLEPGLIKLPESFYKITSLVTLKLFGCRFEPS 170
Query: 51 ----PRSTVTLFSLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNC 93
P T+F F + E++ ++A PL+E +NI NC
Sbjct: 171 RLAKPGMVKTMF--------FRWIRLEMLSALIAKTPLLEILNIKNC 209
>sp|Q9FFU7|FBL90_ARATH Putative F-box/LRR-repeat protein At5g54820 OS=Arabidopsis thaliana
GN=At5g54820 PE=4 SV=1
Length = 472
Score = 35.4 bits (80), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 55/115 (47%), Gaps = 15/115 (13%)
Query: 1 MNRCLSYAFASNVKELKLDVGCCR------------IYNLPQIVFYLKSIYVLDFEFCKL 48
++ + YA ++ VK L +D+ +Y LP+ V+ L ++ L CK
Sbjct: 108 IDALIEYAVSTRVKNLVVDLSNPSWRSNGDISYRHFMYTLPKSVYSLTTLESLKIYGCKF 167
Query: 49 EPPRSTVTLFSLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQLLG 103
+P + V LR L + +V +++ + +++ P ++ ++I NC G+ + G
Sbjct: 168 DPSK-FVNPVLLRSLSIGWVRLEN--LHSLLSKSPSLQSLSIKNCWGVDITSMAG 219
>sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1
SV=2
Length = 990
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 25/169 (14%)
Query: 72 DEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLD-SNRCGLERVYINGVNVH 130
D IR CP +E ++++NC + L+EI +N L Y +++
Sbjct: 384 DAAIRSAAISCPQLESLDVSNCSCVSD------ETLREIAQACANLHILNASYCPNISLE 437
Query: 131 SVDIKVYLEPCEVNVSSCKNLTHLRLDGLSITDKWLYNQISELPFLEYLALHYCMKLRSI 190
SV + + + + SC+ +T S + W+ N P LE L L C L ++
Sbjct: 438 SVHLPMLT---VLKLHSCEGIT-------SASMTWIANS----PALEVLELDNCNLLTTV 483
Query: 191 NISSPRLKELVFERCEELVEFELDTPNLSIFKCFNYVE----SFSSNAL 235
++ RL+ + C + + L + LS N + +SNAL
Sbjct: 484 SLHLSRLQSISLVHCRKFTDLNLQSIMLSSITVSNCPALRRITITSNAL 532
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 70 VDDEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLDSNRCGLERVYINGVNV 129
V DE +R++ C + +N + CP + SL+ + L L +KL S G+ + +
Sbjct: 408 VSDETLREIAQACANLHILNASYCPNI-SLESVHLPMLTVLKLHSCE-GITSASMTWI-A 464
Query: 130 HSVDIKVYLEPCEVNVSSCKNLTHLRLDGLSITDKWLYNQIS-ELPFLEYLALHYCMKLR 188
+S ++V LE N+ + +L RL +S+ + ++ + L + + C LR
Sbjct: 465 NSPALEV-LELDNCNLLTTVSLHLSRLQSISLVHCRKFTDLNLQSIMLSSITVSNCPALR 523
Query: 189 SINISSPRLKELVFERCEELVEFELDTPNL 218
I I+S L+ L ++ E L L +L
Sbjct: 524 RITITSNALRRLALQKQENLTTLVLQCHSL 553
Score = 32.0 bits (71), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 72 DEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLDSNRCGLERVYINGVNVHS 131
D+ + A CPLIE + + +CP + S L LN L + + L+ Y +N+
Sbjct: 699 DDCLSATTASCPLIESLVLMSCPSIGSDGLSSLNGLPNLTV------LDLSYTFLMNLEP 752
Query: 132 VDIKVYLEPCEVNVSSCKNLTHLRLDGLSITDKWLYNQISELPFLEYLALHY 183
V K ++ + + +CK LT L+ LY + LP LE L L Y
Sbjct: 753 V-FKSCIQLKVLKLQACKYLTDSSLEP-------LYKE-GALPALEELDLSY 795
>sp|Q8WV35|LRC29_HUMAN Leucine-rich repeat-containing protein 29 OS=Homo sapiens GN=LRRC29
PE=2 SV=1
Length = 223
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 161 ITDKWLYNQISELPFLEYLALHYCMKLRSINISS-----PRLKELVFERCEELVEFELDT 215
+TD L P LE+LAL +C +L + PRL+ L C +L+E LD
Sbjct: 113 LTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLDA 172
>sp|Q5U263|KDM2A_XENTR Lysine-specific demethylase 2A OS=Xenopus tropicalis GN=kdm2a PE=2
SV=1
Length = 1146
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 47/112 (41%), Gaps = 9/112 (8%)
Query: 90 INNCPGLKSLQLLGLNKLKEIKLDSNRCGLERVY--INGVNVHSVDIKVYLEPC-----E 142
IN PGLK L L G L S C L R V + I+ L P
Sbjct: 957 INRLPGLKDLILAGCTWSAVSALASCSCPLLRTLDLRWTVGIKDTQIRDLLTPASDKSGH 1016
Query: 143 VNVSSCKNLTHLRLDGLSITDKWLYNQISELPFLEYLALHYC--MKLRSINI 192
+ S + LT LRL GL I+D L I P L L L +C + +S+N+
Sbjct: 1017 DSRSKLRLLTDLRLSGLDISDVTLRLIIRHCPLLSKLDLSHCPLLSDQSVNL 1068
>sp|Q9C7X8|FBL33_ARATH Putative F-box/LRR-repeat protein At1g56400 OS=Arabidopsis thaliana
GN=At1g56400 PE=2 SV=1
Length = 479
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 174 PFLEYLALHYCMKLRSINISSPRLKELVFERCEELVEFEL---DTPNLSIFKCFNYVESF 230
P L+ L+++YC + NI+ +KE VFE C+ F + D PN+ IFK + SF
Sbjct: 202 PTLKSLSINYCWGIEIRNIAGD-MKEFVFESCD-FSSFMVCCFDLPNVEIFKYSGQILSF 259
Query: 231 SSNALALS 238
+ +S
Sbjct: 260 DVKRMNMS 267
>sp|Q3UVD5|LGR6_MOUSE Leucine-rich repeat-containing G-protein coupled receptor 6 OS=Mus
musculus GN=Lgr6 PE=2 SV=1
Length = 967
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 7 YAFASNVKELKLDVGCCRIYNLPQIVF-YLKSIYVLDFEFCKL-EPPRSTVTLFSLRKLC 64
YAF + + L + RI ++ F L ++ LD + +L E P + TL L++L
Sbjct: 204 YAFQNLTSLVVLHLHNNRIQHVGTHSFEGLHNLETLDLNYNELQEFPLAIRTLGRLQELG 263
Query: 65 LSFVHVDDEVIRDMVAGCPLIEYININNCPGLKSLQLLG------LNKLKEIKLDSNRCG 118
++ + G PL++ I+ + P +Q +G L+KL + L+
Sbjct: 264 FHNNNIK-AIPEKAFMGSPLLQTIHFYDNP----IQFVGRSAFQYLSKLHTLSLNGATDI 318
Query: 119 LERVYINGVNVHSVDI------KVYLEPCEVNVSSCKNLTHLRLDGLSITDKWLYNQISE 172
E + G S++I + L P V C+ L LR+ LS +NQI E
Sbjct: 319 QEFPDLKGTT--SLEILTLTRAGIRLLPPGV----CQQLPRLRILELS------HNQIEE 366
Query: 173 LPFLEYLALHYCMKLRSINISSPRLKELVFERCEELVEFE 212
LP +LH C KL I + R+KE+ + +L +
Sbjct: 367 LP-----SLHRCQKLEEIGLRHNRIKEIGADTFSQLGSLQ 401
>sp|Q9FVT4|FB63_ARATH Putative F-box protein At1g57690 OS=Arabidopsis thaliana
GN=At1g57690 PE=4 SV=1
Length = 330
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 7 YAFASNVKELKLDVG--CCRIYNLPQIVFYLKSI-YVLDFEFCKLEPPRSTVTLFSLRKL 63
+A + NV+ + LDV +I +I +KS+ + LD PR V+ SL+K
Sbjct: 99 FAMSRNVENMSLDVRFRSNKIPRFYEINSSVKSLSHRLDLHDV---IPRHGVSWTSLKKF 155
Query: 64 CLSFVHVDDEVIRDMVAGCPLIEY 87
LS+ + DE + +++GCP++E+
Sbjct: 156 SLSYCGLPDESAK-ILSGCPILEW 178
>sp|Q0WRC9|SKI17_ARATH F-box protein SKIP17 OS=Arabidopsis thaliana GN=SKIP17 PE=1 SV=1
Length = 479
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 93 CPGLKSLQLLGLNKLKEIKLDS--NRCGL-ERVYINGVNV-HSVDIKVYLEPCEVNVSSC 148
CP + L+++GL L E +S +C L E +++ +++ K E V++C
Sbjct: 226 CPNITDLRIVGLYNLTEELFNSLTKKCRLIEHLFLETYGYPRTLESKAGSSLVEF-VTNC 284
Query: 149 KNLTHLRLDGLSITDKWLYNQISELPFLEYLALHYCMK-----LRSINISSPR--LKELV 201
NLT L L +TD W N L+YL L LR + +S LK L+
Sbjct: 285 PNLTSLTLIRFGLTDDWARNLAESCRKLKYLNLSRSPTIKGRFLRELGLSCKENLLKTLI 344
Query: 202 FERCEELVEFE-------LDTPNLSIFKCFNYVESFSSNALALSQ 239
C +L E E L T N FK ++ S++ LA S
Sbjct: 345 LRSCPKLQEKEVLEFCNSLLTGN---FKSIRQIDVSSNSGLASSD 386
>sp|Q9LJF9|FDL44_ARATH F-box/FBD/LRR-repeat protein At3g26920 OS=Arabidopsis thaliana
GN=At3g26920 PE=2 SV=3
Length = 434
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 5 LSYAFASNVKELKLDVGCCRIYNLPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFSLRKLC 64
+ AF +++L L V + P ++ +++ L+ C L V L SLR L
Sbjct: 110 IGIAFGRQLRKLVLKVYSGDWFKFPTSLYNSETLETLELYHCILIDVPFPVCLKSLRTLN 169
Query: 65 LSFVH-VDDEVIRDMVAGCPLIEYININNCPGLKSLQLLGLNKLKEIKLDSNRCGLERVY 123
L V V+DE + +++AGC +E + I+ L K I + S L+R+
Sbjct: 170 LHEVEFVNDESVVNLLAGCISLENLVIHQTTDLNV-------KTFTIAVPS----LQRLT 218
Query: 124 INGVNVHSVDIKVYLEPCEVNVSSCKNLTHLRLDGLSITDK 164
+ I Y E V V + +L +L+++G+ + D+
Sbjct: 219 V---------IVEYYEEFSVFVVNTPSLKYLKIEGIIVDDR 250
>sp|Q9LJ48|FB191_ARATH Putative F-box protein At3g29830 OS=Arabidopsis thaliana
GN=At3g29830 PE=4 SV=1
Length = 463
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 25 IYNLPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFSLRKLCLSFVHVDDEVIRDMVAGCPL 84
+ LP +++ L+++ L C +P R T LR L + + + E I +++ PL
Sbjct: 142 VIELPALIYGLQTLESLTIYACMFDPSRFTNV--GLRTLSIGWFRL--EKIESLLSKFPL 197
Query: 85 IEYININNCPGLKSLQLLGLNKLKEIKLDS 114
+E ++I +C L ++L G +++E+ +D+
Sbjct: 198 LESLSIISC-YLDEVKLAGQIRVRELIIDN 226
>sp|Q8S8F2|FBL11_ARATH BTB/POZ domain-containing protein FBL11 OS=Arabidopsis thaliana
GN=FBL11 PE=2 SV=2
Length = 940
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 146 SSCKNLTHLRLDGLSITDKWLYNQISELPFLEYLALHYC---MKLRSINISSPRLKELVF 202
S+C L + L I+D L + ++ L L+ LAL YC + L+S S P L++L
Sbjct: 709 STCPLLESIVLHFQEISDSALTSVLTSLKHLQELALSYCFGEISLQSFKFSMPNLRKLRL 768
Query: 203 ERC------EELVEFELDTPNLS 219
ER ++L+ PNL+
Sbjct: 769 ERVTRWMTNDDLLVLTQSCPNLT 791
>sp|Q9FM89|FDL38_ARATH F-box/FBD/LRR-repeat protein At5g56420 OS=Arabidopsis thaliana
GN=At5g56420 PE=2 SV=1
Length = 422
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 27 NLPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFSLRKL-CLSFVHVDDEVIRDMVAGCPLI 85
LP+ +F ++ VL E LE V SL+ L L ++DD+ + +++ C +
Sbjct: 123 RLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSSL 182
Query: 86 EYININNCPG 95
E + + CPG
Sbjct: 183 EDLVVQRCPG 192
>sp|Q9C626|FB37_ARATH F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2
SV=1
Length = 518
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 59 SLRKLCLSFVHVDDEVIRDMVAGCPLIEYININNCPGL 96
+LRKLC+ + D I ++ GCP + + I C G+
Sbjct: 389 ALRKLCIKNCPISDVGIENLANGCPGLTKVKIKKCKGV 426
>sp|Q5ZLN0|LRC40_CHICK Leucine-rich repeat-containing protein 40 OS=Gallus gallus
GN=LRRC40 PE=2 SV=1
Length = 603
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 8 AFASNVKELKLDVGCCRIYNLPQIVFYLKSIYVLDFEFCKLEP-PRSTVTLFSLRKLCLS 66
+FA + ++L++ C ++ +LP + +KS+ LD LE P ++ SL +L L
Sbjct: 192 SFALLINLVRLNLACNQLKDLPADISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLR 251
Query: 67 FVHVDD-------EVIRDMVAGCPLIEYININNCPGLKSLQLLGL--NKLKEI 110
+ ++++++ AG IE +N N L SL +L L NK+K +
Sbjct: 252 KNKLRSLPELPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSV 304
>sp|Q5BJ29|FBXL7_MOUSE F-box/LRR-repeat protein 7 OS=Mus musculus GN=Fbxl7 PE=1 SV=1
Length = 491
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 25/128 (19%)
Query: 27 NLPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFSLRKLC--------LSFVH---VDDEVI 75
L +V Y SI L C+ V+ F LR++ LS H + D I
Sbjct: 315 GLRYLVIYCTSIKELSVSDCRF------VSDFGLREIAKLESRLRYLSIAHCGRITDVGI 368
Query: 76 RDMVAGCPLIEYININNCPGLK--SLQLLGLNKLKEIKLDSNRC------GLERVYINGV 127
R + C + Y+N C G+ ++ L N K LD +C GLE + +N
Sbjct: 369 RYVAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLESLALNCF 428
Query: 128 NVHSVDIK 135
N+ + +K
Sbjct: 429 NLKRLSLK 436
>sp|Q9QZH7|FXL20_RAT F-box/LRR-repeat protein 20 OS=Rattus norvegicus GN=Fbxl20 PE=1
SV=1
Length = 276
Score = 32.3 bits (72), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 26/97 (26%)
Query: 36 KSIYVLDFEFCKLEPPRSTVTLFSLRKLCLSFVHVD--------DEVIRDMVAGCPLIEY 87
++I VL C + T SL K C H+D + ++ + GCPL+E
Sbjct: 117 RNIEVLSLNGC---TKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQ 173
Query: 88 ININ---------------NCPGLKSLQLLGLNKLKE 109
+NI+ C GLK+L L G +L++
Sbjct: 174 LNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQLED 210
>sp|Q9LXJ7|FBD11_ARATH FBD-associated F-box protein At3g52670 OS=Arabidopsis thaliana
GN=At3g52670 PE=1 SV=2
Length = 416
Score = 32.3 bits (72), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 5 LSYAFASNVKELKLDVGCCRIYNLPQIVFYLKSIYVLDFEFCKLEPPRSTVTLFSLRKLC 64
+ AFA +++EL L V + + P + ++ L V L SLR L
Sbjct: 102 IGIAFARHLRELVLYVAPKQTFTFPSSLCICNTLETLKLILGIHVDIPCPVLLKSLRTLH 161
Query: 65 LSFV-HVDDEVIRDMVAGCPLIE-------YININN----CPGLKSLQLLGLNKLKEIKL 112
L V + D+E IR++++ CP++E + N+ N P LK L++ + KE +
Sbjct: 162 LDSVSYKDEESIRNLLSSCPILENLVVYEYWYNVVNFDIEVPSLKRLEICDVLHKKEFRR 221
Query: 113 DS-NRCGLERVYINGVN 128
+ N L+ + I G+N
Sbjct: 222 YTINVPCLKYLRIEGLN 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,705,432
Number of Sequences: 539616
Number of extensions: 6398880
Number of successful extensions: 16923
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 16774
Number of HSP's gapped (non-prelim): 191
length of query: 430
length of database: 191,569,459
effective HSP length: 120
effective length of query: 310
effective length of database: 126,815,539
effective search space: 39312817090
effective search space used: 39312817090
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)